Citrus Sinensis ID: 019298

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340---
Protein Sequence
MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL
Secondary Structure (PSIPRED)
ccccccccccccccccccHHHHHHHHHHHHHcccccEEEcccccccccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHccccccccccEEEcccHHHHHHHHHHHHcccccEEEEcccccccHHHHHcccccEEEEEEccccccccccHHHHHHHcccccEEEEEEcccccccccccHHHHHHHHHHHHHcccEEEEcccccccccccccccccccccccccEEEEcccccccccccccccEEccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEcccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHccccHHHHHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHcccccHHHEEEEcHHHHHHHHHHHHHcccccEEEEEEccccHHHHHHcccccEEEEEEccHHHcccccHHHHHccccccEEEEEEEcccccccccccHHHHHHHHHHHHHHccEEEEEccccccEcccccccHEEcccccccEEEEEcHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccEEcccccEEEEEccc
Coil and Loop (DISEMBL)
meisnggidntgsIITIKGMLSLLMQSVDDEKNEKKVISLamgdptvhscfhTTHVATEAVAEALLSEkfngyaptaglpLTRRAIAEYLSrdlpykltpndvfvtsGCTQAIDVAMALLsrpganillprpgfpiyELSAAFRHIEVRhfdllpdkgwevdlddiesladqNTVALVIInpgnpcgnvySYQHLQKLAETANKLKTLVIADEVyghlvfgdkpfvpmgvfgstvpiltlgslskrwivpgwrlgwfvttdpcgmfrkpkVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFlenfagscvpsyklipelinfkstgsslkyldl
Flexible Loop (DISEMBL)
meisnggidntgsIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPgwrlgwfvttdpcgMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPElinfkstgsslkyldl
Low Complexity Region (SEG)
MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFhtthvateavaeallSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL
Disordered region (IsUnstruct)
**********TGSIITIKGMLSLLMQSV*******KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL******************GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFK***********
Disordered Region (DISOPRED)
***************TIKGMLSLLMQ******NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL
Disordered Region (DISEMBL)
MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL
Disordered Region (DISPRO)
*****GGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	343	2.2.26 [Sep-21-2011]
Q9FN30	414	Probable aminotransferase	yes	no	0.842	0.698	0.733	1e-129
Q9SIV0	462	S-alkyl-thiohydroximate l	no	no	0.836	0.621	0.520	4e-89
Q9LVY1	420	Tyrosine aminotransferase	no	no	0.801	0.654	0.539	2e-87
Q9ST02	461	Nicotianamine aminotransf	N/A	no	0.830	0.618	0.547	7e-86
Q9ST03	551	Nicotianamine aminotransf	N/A	no	0.822	0.511	0.538	4e-84
Q67Y55	449	Probable aminotransferase	no	no	0.758	0.579	0.534	3e-83
Q9SK47	445	Probable aminotransferase	no	no	0.723	0.557	0.518	2e-73
Q8VYP2	424	Probable aminotransferase	no	no	0.725	0.587	0.485	4e-70
Q9SUR6	422	Cystine lyase CORI3 OS=Ar	no	no	0.725	0.590	0.477	7e-68
Q8QZR1	454	Tyrosine aminotransferase	yes	no	0.857	0.647	0.420	3e-61

>sp|Q9FN30|TAT2_ARATH Probable aminotransferase TAT2 OS=Arabidopsis thaliana GN=At5g53970 PE=2 SV=1

 Score =  461 bits (1186), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 215/293 (73%), Positives = 253/293 (86%), Gaps = 4/293 (1%)

Query: 3   ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNE--KKVISLAMGDPTVHSCFHTTHVATEA 60
           + NG    T S ITIKG+LSLLM+S+  E++E  K+VISL MGDPT++SCF TT V+ +A
Sbjct: 1   MENGA--TTTSTITIKGILSLLMESITTEEDEGGKRVISLGMGDPTLYSCFRTTQVSLQA 58

Query: 61  VAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL 120
           V+++LLS KF+GY+PT GLP  RRAIAEYLSRDLPYKL+ +DVF+TSGCTQAIDVA+++L
Sbjct: 59  VSDSLLSNKFHGYSPTVGLPQARRAIAEYLSRDLPYKLSQDDVFITSGCTQAIDVALSML 118

Query: 121 SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII 180
           +RP ANILLPRPGFPIYEL A FRH+EVR+ DLLP+ GWE+DLD +E+LAD+NTVALV+I
Sbjct: 119 ARPRANILLPRPGFPIYELCAKFRHLEVRYVDLLPENGWEIDLDAVEALADENTVALVVI 178

Query: 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240
           NPGNPCGNVYSYQHL K+AE+A KL  LVIADEVYGHL FG KPFVPMGVFGS VP+LTL
Sbjct: 179 NPGNPCGNVYSYQHLMKIAESAKKLGFLVIADEVYGHLAFGSKPFVPMGVFGSIVPVLTL 238

Query: 241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCI 293
           GSLSKRWIVPGWRLGWFVTTDP G F+ PK++ER KKYFDILG PATFIQ  +
Sbjct: 239 GSLSKRWIVPGWRLGWFVTTDPSGSFKDPKIIERFKKYFDILGGPATFIQAAV 291

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: -

>sp|Q9SIV0|SUR1_ARATH S-alkyl-thiohydroximate lyase SUR1 OS=Arabidopsis thaliana GN=SUR1 PE=1 SV=1

 Score =  328 bits (840), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 151/290 (52%), Positives = 206/290 (71%), Gaps = 3/290 (1%)

Query: 6   GGIDNTG--SIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAE 63
           GG D     S +T++G++ +L  +   + N K ++ L  GDP+V+ CF T   A +AV +
Sbjct: 36  GGSDKAAKASTVTLRGVIYMLFDNCGKDVN-KTILPLGHGDPSVYPCFRTCIEAEDAVVD 94

Query: 64  ALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP 123
            L S K N Y P AG+   RRA+A+Y++RDLP+KLTP D+F+T+GC Q I++    L+RP
Sbjct: 95  VLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARP 154

Query: 124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG 183
            ANILLPRPGFP Y+  AA+  +EVR FDLLP+K WE+DL+ IE++AD+NTVA+V+INP 
Sbjct: 155 NANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVINPN 214

Query: 184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSL 243
           NPCGNVYS+ HL+K+AETA KL  +VI+DEVY   +FGD PFV MG F S VP+LTL  +
Sbjct: 215 NPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGI 274

Query: 244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCI 293
           SK W+VPGW++GW    DP G+F   KV++ +K+  D+  DPAT IQ  +
Sbjct: 275 SKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAAL 324

C-S lyase involved in glucosinolate biosynthesis. Converts S-(alkylacetohydroximoyl)-L-cysteine to thiohydroximate. Functions in auxin homeostasis. Probably required for glucosinolate activation in response to pathogens.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9LVY1|TAT_ARATH Tyrosine aminotransferase OS=Arabidopsis thaliana GN=TAT PE=2 SV=1

 Score =  322 bits (826), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 149/276 (53%), Positives = 201/276 (72%), Gaps = 1/276 (0%)

Query: 15  ITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA 74
           +TI+  L+ L+  +D   + + VI L  GDP+    F T   A EA+ +A+ S KFN Y+
Sbjct: 23  LTIRDYLNTLINCLDG-GDVRPVIPLGHGDPSPFPSFRTDQAAVEAICDAVRSTKFNNYS 81

Query: 75  PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGF 134
            ++G+P+ R+A+AEYLS DL Y+++PNDV +T+GC QAI++ ++ L+ PGANILLPRP +
Sbjct: 82  SSSGVPVARKAVAEYLSSDLSYQISPNDVHITAGCVQAIEILISALAIPGANILLPRPTY 141

Query: 135 PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194
           P+Y+  AAF  +EVR+FDLLP+ GW+VDLD +E+LAD  TVA+++INP NPCGNV+S QH
Sbjct: 142 PMYDSRAAFCQLEVRYFDLLPENGWDVDLDGVEALADDKTVAILVINPCNPCGNVFSRQH 201

Query: 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL 254
           LQK+AETA KL  LVIADEVY H  FGDKPFV M  F   VP++ LG++SKRW VPGWRL
Sbjct: 202 LQKIAETACKLGILVIADEVYDHFAFGDKPFVSMAEFAELVPVIVLGAISKRWFVPGWRL 261

Query: 255 GWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQ 290
           GW VT DP G+ +    V+ +    ++  DPATFIQ
Sbjct: 262 GWMVTLDPHGIMKDSGFVQTLINVVNMSTDPATFIQ 297

Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate. Can catalyze the reverse reaction, using L-glutamate in vitro. Can convert phenylalanine to phenylpyruvate and catalyze the reverse reaction in vitro.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9ST02|NAATA_HORVU Nicotianamine aminotransferase A OS=Hordeum vulgare GN=naat-A PE=1 SV=2

 Score =  317 bits (812), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 157/287 (54%), Positives = 205/287 (71%), Gaps = 2/287 (0%)

Query: 5   NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEA 64
           +G +  TG+  +I+ +   +  SV+ E   + V+ LA GDP+V   F T   A +AVA A
Sbjct: 49  DGILATTGAKNSIRAIRYKISASVE-ESGPRPVLPLAHGDPSVFPAFRTAVEAEDAVAAA 107

Query: 65  LLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR-P 123
           L + +FN YA   GLP  R A+AE+LS+ +PYKL+ +DVF+T+G TQAI+V + +L++  
Sbjct: 108 LRTGQFNCYAAGVGLPAARSAVAEHLSQGVPYKLSADDVFLTAGGTQAIEVIIPVLAQTA 167

Query: 124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG 183
           GANILLPRPG+P YE  AAF  +EVRHFDL+PDKGWE+D+D +ES+AD+NT A+VIINP 
Sbjct: 168 GANILLPRPGYPNYEARAAFNKLEVRHFDLIPDKGWEIDIDSLESIADKNTTAMVIINPN 227

Query: 184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSL 243
           NPCG+VYSY HL K+AE A KL  LVIADEVYG LV G  PF+PMGVFG   P+L++GSL
Sbjct: 228 NPCGSVYSYDHLAKVAEVARKLGILVIADEVYGKLVLGSAPFIPMGVFGHIAPVLSIGSL 287

Query: 244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQ 290
           SK WIVPGWRLGW    DP  +  K K+   +  Y ++  DPATF+Q
Sbjct: 288 SKSWIVPGWRLGWVAVYDPTKILEKTKISTSITNYLNVSTDPATFVQ 334

Involved in biosynthesis of mugineic acid family phytosiderophores.

Hordeum vulgare (taxid: 4513)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 8

EC: 0

>sp|Q9ST03|NAATB_HORVU Nicotianamine aminotransferase B OS=Hordeum vulgare GN=naat-B PE=1 SV=2

 Score =  311 bits (798), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 153/284 (53%), Positives = 203/284 (71%), Gaps = 2/284 (0%)

Query: 11  TGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF 70
           TG+ ++I+ +   +  SV  EK  + V+ LA GDP+V   F T   A +AVA A+ + +F
Sbjct: 145 TGANMSIRAIRYKISASVQ-EKGPRPVLPLAHGDPSVFPAFRTAVEAEDAVAAAVRTGQF 203

Query: 71  NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR-PGANILL 129
           N Y    GLP  R A+AE+LS+ +PY L+ +DVF+T+G TQAI+V + +L++  GANILL
Sbjct: 204 NCYPAGVGLPAARSAVAEHLSQGVPYMLSADDVFLTAGGTQAIEVIIPVLAQTAGANILL 263

Query: 130 PRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV 189
           PRPG+P YE  AAF  +EVRHFDL+PDKGWE+D+D +ES+AD+NT A+VIINP NPCG+V
Sbjct: 264 PRPGYPNYEARAAFNRLEVRHFDLIPDKGWEIDIDSLESIADKNTTAMVIINPNNPCGSV 323

Query: 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV 249
           YSY HL K+AE A +L  LVIADEVYG LV G  PF+PMGVFG   P+L++GSLSK WIV
Sbjct: 324 YSYDHLSKVAEVAKRLGILVIADEVYGKLVLGSAPFIPMGVFGHITPVLSIGSLSKSWIV 383

Query: 250 PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCI 293
           PGWRLGW    DP  + ++ K+   +  Y ++  DPATFIQ  +
Sbjct: 384 PGWRLGWVAVYDPRKILQETKISTSITNYLNVSTDPATFIQAAL 427

Involved in biosynthesis of mugineic acid family phytosiderophores.

Hordeum vulgare (taxid: 4513)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 8

EC: 0

>sp|Q67Y55|TAT1_ARATH Probable aminotransferase TAT1 OS=Arabidopsis thaliana GN=At4g28420 PE=2 SV=1

 Score =  308 bits (790), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 139/260 (53%), Positives = 185/260 (71%)

Query: 34  EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
           +K ++ LA GDP+V+ C+ T+ +   AV + L S K N Y P AG+   R+A+A+Y++RD
Sbjct: 59  KKPLLPLAHGDPSVYPCYRTSILVENAVVDVLRSGKGNSYGPAAGILPARQAVADYVNRD 118

Query: 94  LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL 153
           L  K+ PNDVF+T GC Q I+V +  L+RP ANILLPRP +P YE  A +  +EVR FDL
Sbjct: 119 LTNKVKPNDVFITVGCNQGIEVVLQSLARPNANILLPRPSYPHYEARAVYSGLEVRKFDL 178

Query: 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
           LP+K WE+DL  IE++AD+NTVA+VIINP NPCGNVYSY HL+K+AETA KL  +VI DE
Sbjct: 179 LPEKEWEIDLPGIEAMADENTVAMVIINPNNPCGNVYSYDHLKKVAETAKKLGIMVITDE 238

Query: 214 VYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273
           VY   +FGDKPFVPMG F S  P++TLG +SK WIVPGWR+GW    DP G+ +   +V+
Sbjct: 239 VYCQTIFGDKPFVPMGEFSSITPVITLGGISKGWIVPGWRIGWIALNDPRGILKSTGMVQ 298

Query: 274 RMKKYFDILGDPATFIQVCI 293
            +++  DI  D  T +Q  +
Sbjct: 299 SIQQNLDITPDATTIVQAAL 318

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

>sp|Q9SK47|TAT3_ARATH Probable aminotransferase TAT3 OS=Arabidopsis thaliana GN=TAT3 PE=2 SV=1

 Score =  276 bits (705), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 129/249 (51%), Positives = 176/249 (70%), Gaps = 1/249 (0%)

Query: 43  GDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPND 102
           G+P+ HS F T   A EAVA A  S   N YAP+ G+   RRA+AEYL+ +LP KL   D
Sbjct: 57  GEPSAHSNFRTCPEAEEAVAAAARSGMANSYAPSPGVFKARRAVAEYLNGELPTKLKAED 116

Query: 103 VFVTSGCTQAIDVAM-ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEV 161
           V++T GC QAI++ + +L   P ANILLPRPG+P Y+  A +  +E+R +DLLP+  WE+
Sbjct: 117 VYITGGCNQAIEIVIDSLAGNPSANILLPRPGYPHYDARAVYSGLEIRKYDLLPESDWEI 176

Query: 162 DLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG 221
           +LD +E+ AD+NTVA+VIINP NPCGNVY+Y HL K+AE A KL  ++I+DEVY H+V+G
Sbjct: 177 NLDGLEAAADENTVAMVIINPNNPCGNVYTYDHLNKVAEMARKLGIMIISDEVYDHVVYG 236

Query: 222 DKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI 281
           DKPF+PMG F S  P++TLGS+SK W+ PGWR+GW    DP G+F    VV+ ++ + D+
Sbjct: 237 DKPFIPMGKFASIAPVITLGSISKGWVNPGWRVGWIAMNDPNGIFVSTGVVQAIEDFLDL 296

Query: 282 LGDPATFIQ 290
              P+  +Q
Sbjct: 297 TPQPSFILQ 305

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

>sp|Q8VYP2|TAT4_ARATH Probable aminotransferase TAT4 OS=Arabidopsis thaliana GN=At4g23590 PE=2 SV=1

 Score =  265 bits (677), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 121/249 (48%), Positives = 174/249 (69%)

Query: 45  PTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVF 104
           P +     T+H A +AV +A+L    N YAP+ GLP+ +RA+AEYL+RDL  KLT +DV+
Sbjct: 45  PPLSEEAETSHTAEKAVVKAVLCGTGNAYAPSIGLPVAKRAVAEYLNRDLDNKLTGDDVY 104

Query: 105 VTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLD 164
           +T GC QAI++A+++L++P ANILLPRPGFP   + + ++H+EVR ++ +P++ +E+D +
Sbjct: 105 MTVGCKQAIELAVSILAKPKANILLPRPGFPWDMVHSIYKHLEVRRYEFIPERDFEIDFN 164

Query: 165 DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP 224
            +  + D+NT A+ IINP NP GN Y+  HL++LA  A +L  +V++DEVY   VFG  P
Sbjct: 165 SVREMVDENTFAIFIINPHNPNGNYYTEAHLKQLATLARELGIMVVSDEVYRWSVFGSNP 224

Query: 225 FVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGD 284
           FVPMG F S VP++TLGS+SK WIVPGWR GW    D  G+FR  KV++  K++ +I   
Sbjct: 225 FVPMGKFSSIVPVITLGSISKGWIVPGWRTGWLALHDLNGVFRSTKVLKAAKEFLEITSK 284

Query: 285 PATFIQVCI 293
           P T IQ  I
Sbjct: 285 PPTVIQAAI 293

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

>sp|Q9SUR6|CORI3_ARATH Cystine lyase CORI3 OS=Arabidopsis thaliana GN=CORI3 PE=1 SV=1

 Score =  257 bits (657), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 119/249 (47%), Positives = 171/249 (68%)

Query: 45  PTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVF 104
           P  +    T++ A +AV +A+L    N YAP+ GL   + A+AEYL++ LP KLT +DVF
Sbjct: 45  PPRNEILETSNTAEKAVVKAVLYGSGNAYAPSLGLAAAKSAVAEYLNQGLPKKLTADDVF 104

Query: 105 VTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLD 164
           +T GC QAI++A+ +L++P AN+LLP PGFP   + + ++++EVRH++ LP+K +E+D D
Sbjct: 105 MTLGCKQAIELAVDILAKPKANVLLPSPGFPWDLVRSIYKNLEVRHYNFLPEKNFEIDFD 164

Query: 165 DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP 224
            + +L D+NT A+ IINP NP GN YS  HL++LAE A +LK +V++DEV+   +FG  P
Sbjct: 165 SVRALVDENTFAIFIINPHNPNGNTYSEAHLKQLAELAKELKIMVVSDEVFRWTLFGSNP 224

Query: 225 FVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGD 284
           FVPMG F S VP++TLGS+SK W VPGWR GW    D  G+FR  KV++  + +  I  +
Sbjct: 225 FVPMGKFSSIVPVVTLGSISKGWKVPGWRTGWLTLHDLDGVFRNTKVLQAAQDFLQINNN 284

Query: 285 PATFIQVCI 293
           P T IQ  I
Sbjct: 285 PPTVIQAAI 293

Possesses cystine lyase and tyrosine aminotransferase activities in vitro. May be required for the synthesis of homogentisate a precursor of tocopherols and plastoquinones.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q8QZR1|ATTY_MOUSE Tyrosine aminotransferase OS=Mus musculus GN=Tat PE=1 SV=1

 Score =  235 bits (600), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 130/309 (42%), Positives = 184/309 (59%), Gaps = 15/309 (4%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL-SRD 93
           K VISL++GDPTV     T    T+A+ +AL S K+NGYAP+ G   +R  +A Y    +
Sbjct: 71  KTVISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGYLSSREEVASYYHCPE 130

Query: 94  LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL 153
            P  L   DV +TSGC+QAI++ +A+L+ PG NIL+PRPGF +Y   A    IEV+ ++L
Sbjct: 131 AP--LEAKDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYRTLAESMGIEVKLYNL 188

Query: 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
           LP+K WE+DL  +ESL D+ T  LV+ NP NPCG+V+S +HLQK+   A +    ++ADE
Sbjct: 189 LPEKSWEIDLKQLESLIDEKTACLVVNNPSNPCGSVFSKRHLQKILAVAERQCVPILADE 248

Query: 214 VYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273
           +YG +VF D  + PM    + VPIL+ G L+KRW+VPGWRLGW +  D   +F       
Sbjct: 249 IYGDMVFSDCKYEPMATLSTNVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDG 308

Query: 274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHG------NFLENFAGSCVPSYKLIPE 327
            +K    ILG P T +Q     G L +I+Q           +FL++ A  C  +   IP 
Sbjct: 309 LVKLSQRILG-PCTIVQ-----GALKSILQRTPQEFYQDTLSFLKSNADLCYGALSAIPG 362

Query: 328 LINFKSTGS 336
           L   + +G+
Sbjct: 363 LQPVRPSGA 371

Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate. Can catalyze the reverse reaction, using glutamic acid, with 2-oxoglutarate as cosubstrate (in vitro). Has no transaminase activity towards phenylalanine.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	343
224117120	417	aminotransferase family protein [Populus	0.935	0.769	0.746	1e-139
449456617	412	PREDICTED: probable aminotransferase TAT	0.941	0.783	0.713	1e-134
288310300	412	aromatic amino acid transaminase [Cucumi	0.825	0.686	0.767	1e-131
290760242	414	aminotransferase family protein [Bruguie	0.825	0.683	0.760	1e-129
255564587	415	tyrosine aminotransferase, putative [Ric	0.941	0.778	0.707	1e-128
297792821	411	hypothetical protein ARALYDRAFT_918507 [	0.825	0.688	0.749	1e-128
15239521	414	tyrosine aminotransferase [Arabidopsis t	0.842	0.698	0.733	1e-127
23397279	414	putatative tyrosine aminotransferase [Ar	0.842	0.698	0.730	1e-126
351726492	425	tyrosine aminotransferase [Glycine max]	0.819	0.661	0.748	1e-126
357516533	417	Tyrosine aminotransferase [Medicago trun	0.819	0.673	0.759	1e-125

>gi|224117120|ref|XP_002317481.1| aminotransferase family protein [Populus trichocarpa] gi|222860546|gb|EEE98093.1| aminotransferase family protein [Populus trichocarpa]

 Score =  500 bits (1288), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 242/324 (74%), Positives = 271/324 (83%), Gaps = 3/324 (0%)

Query: 5   NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEA 64
           NG   +T   ITIKG+LSLLM+S+D+  + + VISL MGDPT HSCFHTTHVA EAV +A
Sbjct: 7   NGYEMDTPKNITIKGILSLLMESIDNNNHSRSVISLGMGDPTAHSCFHTTHVAQEAVVDA 66

Query: 65  LLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPG 124
           L S+KFNGYAPT GLP TRRAIAEYLSRDLPYKL+ +DVF+TSGCTQAIDVA+A+L+RPG
Sbjct: 67  LQSDKFNGYAPTVGLPQTRRAIAEYLSRDLPYKLSSDDVFITSGCTQAIDVALAMLARPG 126

Query: 125 ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGN 184
           ANILLPRPGFPIYEL AAFRH+EVRHFDLLP+KGWEVDLD +E+LADQNTVALVIINPGN
Sbjct: 127 ANILLPRPGFPIYELCAAFRHLEVRHFDLLPEKGWEVDLDAVEALADQNTVALVIINPGN 186

Query: 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS 244
           PCGNVYSYQHL+K+AETA KLKTLVIADEVYGHL FG  PFVPMGVFGS VP+LTLGSLS
Sbjct: 187 PCGNVYSYQHLKKIAETAEKLKTLVIADEVYGHLAFGRNPFVPMGVFGSIVPVLTLGSLS 246

Query: 245 KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQI 304
           KRWIVPGWRLGWFVT+DP GMFR PKVVER+KKYFDILG PATFIQ  +  G L    ++
Sbjct: 247 KRWIVPGWRLGWFVTSDPSGMFRNPKVVERIKKYFDILGGPATFIQAAVP-GILELTDEV 305

Query: 305 MIHG--NFLENFAGSCVPSYKLIP 326
                 N L+  +  C    K IP
Sbjct: 306 FFKRTINILKQSSDICCDRIKEIP 329

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449456617|ref|XP_004146045.1| PREDICTED: probable aminotransferase TAT2-like [Cucumis sativus] gi|449520475|ref|XP_004167259.1| PREDICTED: probable aminotransferase TAT2-like [Cucumis sativus]

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 234/328 (71%), Positives = 274/328 (83%), Gaps = 5/328 (1%)

Query: 1   MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEA 60
           +E  N  +D T S ITIKG+LSLL+Q+ D E N +++ISL MGDP+ +SCFHTT +A +A
Sbjct: 3   IEAVNSKVD-TASTITIKGILSLLVQNAD-ENNGRRLISLGMGDPSAYSCFHTTRIAQDA 60

Query: 61  VAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL 120
           V ++L SEKFNGYAPTAGLP TRRAIAEYLSRDLPYKLT +DVF+TSGCTQAIDVA+A+L
Sbjct: 61  VVDSLESEKFNGYAPTAGLPQTRRAIAEYLSRDLPYKLTSDDVFITSGCTQAIDVALAML 120

Query: 121 SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII 180
           +RPGANILLPRPGFPIYEL +AFR++EVRHF+LLP +GWEVDLD IE+LAD+NTVALVII
Sbjct: 121 ARPGANILLPRPGFPIYELCSAFRNLEVRHFNLLPQQGWEVDLDAIETLADKNTVALVII 180

Query: 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240
           NPGNPCGNVYSYQHL+K+AETA KL  LVIADEVYGHL FG +PFVPMGVFGSTVP+LTL
Sbjct: 181 NPGNPCGNVYSYQHLKKIAETAEKLGILVIADEVYGHLAFGSRPFVPMGVFGSTVPVLTL 240

Query: 241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLST 300
           GSLSKRWIVPGWRLGWFVT+DP G FRKPKV+ER+KKYFDILG PATFIQ  + +  L +
Sbjct: 241 GSLSKRWIVPGWRLGWFVTSDPSGTFRKPKVIERIKKYFDILGGPATFIQAAVPH-ILES 299

Query: 301 IMQIMIHG--NFLENFAGSCVPSYKLIP 326
             ++      N L+  +  C    K IP
Sbjct: 300 TDEVFFKKTINILKQTSEICCRKIKEIP 327

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|288310300|gb|ADC45389.1| aromatic amino acid transaminase [Cucumis melo]

 Score =  472 bits (1215), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 218/284 (76%), Positives = 254/284 (89%), Gaps = 1/284 (0%)

Query: 10  NTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK 69
           +T S I+IKG+LSLL+Q+ D E N +++ISL MGDP+ +SCFHTT +A +AV + L SEK
Sbjct: 11  DTASTISIKGILSLLVQNAD-ENNGRRLISLGMGDPSAYSCFHTTRIAQDAVVDCLESEK 69

Query: 70  FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILL 129
           FNGYAPT GLP +RRAIAEYLSRDLPYKLT +DVF+TSGCTQAIDVA+A+L+RPGANILL
Sbjct: 70  FNGYAPTVGLPQSRRAIAEYLSRDLPYKLTSDDVFITSGCTQAIDVALAMLARPGANILL 129

Query: 130 PRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV 189
           PRPGFPIYEL ++F+++EVRHF+LLP +GWEVDL  IE+LAD+NTVALVIINPGNPCGNV
Sbjct: 130 PRPGFPIYELCSSFQNLEVRHFNLLPQQGWEVDLHAIETLADKNTVALVIINPGNPCGNV 189

Query: 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV 249
           YSYQHL+K+AETA KL  LVIADEVYGHL FG +PFVPMGVFGSTVP+LTLGSLSKRWIV
Sbjct: 190 YSYQHLKKIAETAEKLGILVIADEVYGHLAFGSRPFVPMGVFGSTVPVLTLGSLSKRWIV 249

Query: 250 PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCI 293
           PGWRLGWFVT+DP GMFRKPKV+ER+KKYFD LG PATFIQ  +
Sbjct: 250 PGWRLGWFVTSDPSGMFRKPKVIERIKKYFDTLGGPATFIQAAV 293

Source: Cucumis melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|290760242|gb|ADD54646.1| aminotransferase family protein [Bruguiera gymnorhiza]

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 216/284 (76%), Positives = 251/284 (88%), Gaps = 1/284 (0%)

Query: 10  NTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK 69
            T + ITIKG+LSLLMQS+D E+  + VISL MGDP+ +SCFHTT VA EAV +AL  +K
Sbjct: 12  ETSNTITIKGILSLLMQSID-ERVGRSVISLGMGDPSAYSCFHTTPVAQEAVVDALQCDK 70

Query: 70  FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILL 129
           FNGY+PT GLP TRRA+AE+LSRDLPYKL+ +DVF+T GCTQ+IDVA+A+L+ PGANILL
Sbjct: 71  FNGYSPTVGLPQTRRAVAEFLSRDLPYKLSADDVFITCGCTQSIDVAVAMLAHPGANILL 130

Query: 130 PRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV 189
           PRPGFPIYELSA+FRH+EVRHFDLLP+KGWEVDL+ +E+LAD+NTVALVIINPGNPCGNV
Sbjct: 131 PRPGFPIYELSASFRHLEVRHFDLLPEKGWEVDLNAVEALADENTVALVIINPGNPCGNV 190

Query: 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV 249
           YSYQHL+++AETA KLK LVIADEVYGHL FG  PF+PMGVFGS VP+LTLGSLSKRWIV
Sbjct: 191 YSYQHLKRIAETAEKLKILVIADEVYGHLAFGHNPFIPMGVFGSIVPVLTLGSLSKRWIV 250

Query: 250 PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCI 293
           PGWRLGWFV +DP G FRKPK VER+KKYFD+LG PATFIQ  +
Sbjct: 251 PGWRLGWFVISDPVGTFRKPKTVERIKKYFDLLGGPATFIQAAL 294

Source: Bruguiera gymnorhiza

Species: Bruguiera gymnorhiza

Genus: Bruguiera

Family: Rhizophoraceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255564587|ref|XP_002523289.1| tyrosine aminotransferase, putative [Ricinus communis] gi|223537502|gb|EEF39128.1| tyrosine aminotransferase, putative [Ricinus communis]

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 235/332 (70%), Positives = 264/332 (79%), Gaps = 9/332 (2%)

Query: 1   MEISNGGIDN---TGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVA 57
           ME    G  N   T   ITIKG+LSLLM+++D EK  + VISL +GDPT +SCFHTT VA
Sbjct: 1   MERKENGTVNEVETPKNITIKGILSLLMENID-EKAGRSVISLGIGDPTAYSCFHTTPVA 59

Query: 58  TEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAM 117
            EAV  AL  +KFNGYAPT GLP TRRAI++YLSRDLPYKL+ +DVFVTSGCTQAIDVA+
Sbjct: 60  QEAVVNALQCDKFNGYAPTVGLPQTRRAISDYLSRDLPYKLSSDDVFVTSGCTQAIDVAL 119

Query: 118 ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL 177
           A+LSRPGANILLPRP FPIYEL AAFR +EVRH DLLP+KGWEVDLD +E LADQNTVAL
Sbjct: 120 AMLSRPGANILLPRPCFPIYELCAAFRGLEVRHIDLLPEKGWEVDLDAVEMLADQNTVAL 179

Query: 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI 237
           VIINPGNPCGNVYSY+HL+++AETA KLK LVIADEVYGHL  G+ PFVPMGVFGS VPI
Sbjct: 180 VIINPGNPCGNVYSYRHLKEIAETAEKLKILVIADEVYGHLAIGNNPFVPMGVFGSIVPI 239

Query: 238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQV---CIM 294
           LTLGSLSKRWIVPGWRLGWFVTTDP G+ RKPK VER+KKYFDILG PATFIQ    CI+
Sbjct: 240 LTLGSLSKRWIVPGWRLGWFVTTDPSGILRKPKFVERIKKYFDILGGPATFIQAAVPCIL 299

Query: 295 YGCLSTIMQIMIHGNFLENFAGSCVPSYKLIP 326
                   +  I  N L++ +  C    K IP
Sbjct: 300 EQTDENFFKETI--NILKHASEICCDRIKEIP 329

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297792821|ref|XP_002864295.1| hypothetical protein ARALYDRAFT_918507 [Arabidopsis lyrata subsp. lyrata] gi|297310130|gb|EFH40554.1| hypothetical protein ARALYDRAFT_918507 [Arabidopsis lyrata subsp. lyrata]

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 212/283 (74%), Positives = 249/283 (87%)

Query: 11  TGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF 70
           T S ITIKG+LSLLM+S+ +++  K+V+SL MGDPT++SCF TT V+ +AV+++LLS KF
Sbjct: 6   TTSTITIKGILSLLMESISEDEEGKRVVSLGMGDPTLYSCFRTTQVSLQAVSDSLLSNKF 65

Query: 71  NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP 130
           +GY+PT GLP  RRAIAEYLSRDLPYKL+ +DVF+TSGCTQAIDVA+++L+RP ANILLP
Sbjct: 66  HGYSPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLARPRANILLP 125

Query: 131 RPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVY 190
           RPGFPIYEL A FRH+EVR+ DLLP+ GWE+DLD +ESLAD+NTVALV+INPGNPCGNVY
Sbjct: 126 RPGFPIYELCAKFRHLEVRYVDLLPENGWEIDLDAVESLADENTVALVVINPGNPCGNVY 185

Query: 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP 250
           SYQHL K+AETA KL  LVIADEVYGHL FG KPFVPMGVFGS VP+LTLGSLSKRWIVP
Sbjct: 186 SYQHLMKIAETAKKLGFLVIADEVYGHLAFGSKPFVPMGVFGSIVPVLTLGSLSKRWIVP 245

Query: 251 GWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCI 293
           GWRLGWFVTTDP G F+ PK++ER KKYFDILG PATFIQ  +
Sbjct: 246 GWRLGWFVTTDPSGSFKDPKIIERFKKYFDILGGPATFIQAAV 288

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15239521|ref|NP_200208.1| tyrosine aminotransferase [Arabidopsis thaliana] gi|75171781|sp|Q9FN30.1|TAT2_ARATH RecName: Full=Probable aminotransferase TAT2; AltName: Full=Tyrosine aminotransferase 2 gi|10177259|dbj|BAB10727.1| tyrosine aminotransferase [Arabidopsis thaliana] gi|25054842|gb|AAN71911.1| putative tyrosine aminotransferase [Arabidopsis thaliana] gi|332009051|gb|AED96434.1| tyrosine aminotransferase [Arabidopsis thaliana]

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 215/293 (73%), Positives = 253/293 (86%), Gaps = 4/293 (1%)

Query: 3   ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNE--KKVISLAMGDPTVHSCFHTTHVATEA 60
           + NG    T S ITIKG+LSLLM+S+  E++E  K+VISL MGDPT++SCF TT V+ +A
Sbjct: 1   MENGA--TTTSTITIKGILSLLMESITTEEDEGGKRVISLGMGDPTLYSCFRTTQVSLQA 58

Query: 61  VAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL 120
           V+++LLS KF+GY+PT GLP  RRAIAEYLSRDLPYKL+ +DVF+TSGCTQAIDVA+++L
Sbjct: 59  VSDSLLSNKFHGYSPTVGLPQARRAIAEYLSRDLPYKLSQDDVFITSGCTQAIDVALSML 118

Query: 121 SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII 180
           +RP ANILLPRPGFPIYEL A FRH+EVR+ DLLP+ GWE+DLD +E+LAD+NTVALV+I
Sbjct: 119 ARPRANILLPRPGFPIYELCAKFRHLEVRYVDLLPENGWEIDLDAVEALADENTVALVVI 178

Query: 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240
           NPGNPCGNVYSYQHL K+AE+A KL  LVIADEVYGHL FG KPFVPMGVFGS VP+LTL
Sbjct: 179 NPGNPCGNVYSYQHLMKIAESAKKLGFLVIADEVYGHLAFGSKPFVPMGVFGSIVPVLTL 238

Query: 241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCI 293
           GSLSKRWIVPGWRLGWFVTTDP G F+ PK++ER KKYFDILG PATFIQ  +
Sbjct: 239 GSLSKRWIVPGWRLGWFVTTDPSGSFKDPKIIERFKKYFDILGGPATFIQAAV 291

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|23397279|gb|AAN31921.1| putatative tyrosine aminotransferase [Arabidopsis thaliana]

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 214/293 (73%), Positives = 252/293 (86%), Gaps = 4/293 (1%)

Query: 3   ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNE--KKVISLAMGDPTVHSCFHTTHVATEA 60
           + NG    T S ITIKG+LSLLM+S+  E++E  K+VISL MGDPT++SCF TT V+ +A
Sbjct: 1   MENGA--TTTSTITIKGILSLLMESITTEEDEGGKRVISLGMGDPTLYSCFRTTQVSLQA 58

Query: 61  VAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL 120
           V+++LLS KF+GY+ T GLP  RRAIAEYLSRDLPYKL+ +DVF+TSGCTQAIDVA+++L
Sbjct: 59  VSDSLLSNKFHGYSHTVGLPQARRAIAEYLSRDLPYKLSQDDVFITSGCTQAIDVALSML 118

Query: 121 SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII 180
           +RP ANILLPRPGFPIYEL A FRH+EVR+ DLLP+ GWE+DLD +E+LAD+NTVALV+I
Sbjct: 119 ARPRANILLPRPGFPIYELCAKFRHLEVRYVDLLPENGWEIDLDAVEALADENTVALVVI 178

Query: 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240
           NPGNPCGNVYSYQHL K+AE+A KL  LVIADEVYGHL FG KPFVPMGVFGS VP+LTL
Sbjct: 179 NPGNPCGNVYSYQHLMKIAESAKKLGFLVIADEVYGHLAFGSKPFVPMGVFGSIVPVLTL 238

Query: 241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCI 293
           GSLSKRWIVPGWRLGWFVTTDP G F+ PK++ER KKYFDILG PATFIQ  +
Sbjct: 239 GSLSKRWIVPGWRLGWFVTTDPSGSFKDPKIIERFKKYFDILGGPATFIQAAV 291

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726492|ref|NP_001238408.1| tyrosine aminotransferase [Glycine max] gi|62912516|gb|AAY21813.1| tyrosine aminotransferase [Glycine max]

 Score =  456 bits (1172), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 214/286 (74%), Positives = 250/286 (87%), Gaps = 5/286 (1%)

Query: 13  SIITIKGMLSLLMQSVDDEK-----NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS 67
           S ITIKG+LSLLM+S+DDE      ++K+VISL MGDPT+ + FHT +V  EAVA+AL S
Sbjct: 21  STITIKGILSLLMESIDDENCDGGGSKKRVISLGMGDPTLTTLFHTPNVVEEAVADALQS 80

Query: 68  EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANI 127
            KF+GYAPTAGL   R AIAEYLSRDLPY+L+ +DVF+T GCTQAIDV++A+L+RPGANI
Sbjct: 81  RKFHGYAPTAGLLQARIAIAEYLSRDLPYQLSRDDVFITCGCTQAIDVSVAMLARPGANI 140

Query: 128 LLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG 187
           LLPRPGFPIYEL AAFR +EVRH+DLLP+KGWEVDLD +E+LADQNTVAL IINPGNPCG
Sbjct: 141 LLPRPGFPIYELCAAFRGVEVRHYDLLPEKGWEVDLDAVEALADQNTVALAIINPGNPCG 200

Query: 188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW 247
           NVYSY HL+K+AETA ++ T+VI+DEVYGHL FG KPFVPMGVFGSTVP+LTLGSLSKRW
Sbjct: 201 NVYSYHHLEKIAETAKRVGTIVISDEVYGHLAFGSKPFVPMGVFGSTVPVLTLGSLSKRW 260

Query: 248 IVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCI 293
           IVPGWRLGWFVT DP G FR+PKVVER+KKYFD+LG PATF+Q  +
Sbjct: 261 IVPGWRLGWFVTNDPSGTFREPKVVERIKKYFDLLGGPATFLQAAV 306

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357516533|ref|XP_003628555.1| Tyrosine aminotransferase [Medicago truncatula] gi|355522577|gb|AET03031.1| Tyrosine aminotransferase [Medicago truncatula]

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 215/283 (75%), Positives = 246/283 (86%), Gaps = 2/283 (0%)

Query: 13  SIITIKGMLSLLMQSV--DDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF 70
           S ITIKG+LSLLM+SV  +++ N K+VISL MGDPT+ +CF    VA EAVA+AL S  F
Sbjct: 16  STITIKGILSLLMESVGENNDDNSKRVISLGMGDPTLSTCFPNAKVAEEAVADALCSGNF 75

Query: 71  NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP 130
           +GYAPTAGL   R AIA+YLS DLPY+L+ +DVF+T GCTQAIDV++ALLSRPGANILLP
Sbjct: 76  HGYAPTAGLLQARNAIAKYLSDDLPYELSSDDVFITCGCTQAIDVSVALLSRPGANILLP 135

Query: 131 RPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVY 190
           RPGFPIYEL AAFR +EVRH+DLLP+KGWEVDLD IE+L DQNTVALVIINPGNPCGNVY
Sbjct: 136 RPGFPIYELCAAFRQVEVRHYDLLPEKGWEVDLDAIETLVDQNTVALVIINPGNPCGNVY 195

Query: 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP 250
           +Y HL+K+AETA +L T+VIADEVYGHL FGD PFVPMGVFGSTVP++TLGSLSKRWIVP
Sbjct: 196 TYHHLEKIAETAKRLGTIVIADEVYGHLAFGDNPFVPMGVFGSTVPVITLGSLSKRWIVP 255

Query: 251 GWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCI 293
           GWRLGWFVT DP G FRKPKVVER+KKYFD+LG PATFIQ  +
Sbjct: 256 GWRLGWFVTNDPSGTFRKPKVVERIKKYFDLLGGPATFIQAAV 298

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	343
TAIR|locus:2154714	414	TAT7 "tyrosine aminotransferas	0.842	0.698	0.709	4.1e-113
TAIR|locus:2046056	462	SUR1 "SUPERROOT 1" [Arabidopsi	0.836	0.621	0.503	2.2e-80
UNIPROTKB|Q9ST02	461	naat-A "Nicotianamine aminotra	0.830	0.618	0.522	2.3e-78
UNIPROTKB|Q9ST03	551	naat-B "Nicotianamine aminotra	0.839	0.522	0.510	1.6e-77
TAIR|locus:2158926	420	AT5G36160 [Arabidopsis thalian	0.912	0.745	0.476	3.4e-77
TAIR|locus:2121407	449	AT4G28420 [Arabidopsis thalian	0.830	0.634	0.493	1.9e-74
TAIR|locus:2121382	447	AT4G28410 [Arabidopsis thalian	0.810	0.621	0.448	3.8e-69
TAIR|locus:2047441	445	TAT3 "tyrosine aminotransferas	0.746	0.575	0.478	1.7e-68
TAIR|locus:2128434	424	AT4G23590 [Arabidopsis thalian	0.650	0.525	0.506	6.2e-62
TAIR|locus:2128459	422	CORI3 "CORONATINE INDUCED 1" [	0.650	0.528	0.502	3.1e-60

TAIR|locus:2154714 TAT7 "tyrosine aminotransferase 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 1116 (397.9 bits), Expect = 4.1e-113, P = 4.1e-113
 Identities = 208/293 (70%), Positives = 241/293 (82%)

Query:     3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNE--KKVISLAMGDPTVHSCFXXXXXXXXX 60
             + NG    T S ITIKG+LSLLM+S+  E++E  K+VISL MGDPT++SCF         
Sbjct:     1 MENGA--TTTSTITIKGILSLLMESITTEEDEGGKRVISLGMGDPTLYSCFRTTQVSLQA 58

Query:    61 XXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL 120
                   S KF+GY+PT GLP  RRAIAEYLSRDLPYKL+ +DVF+TSGCTQAIDVA+++L
Sbjct:    59 VSDSLLSNKFHGYSPTVGLPQARRAIAEYLSRDLPYKLSQDDVFITSGCTQAIDVALSML 118

Query:   121 SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII 180
             +RP ANILLPRPGFPIYEL A FRH+EVR+ DLLP+ GWE+DLD +E+LAD+NTVALV+I
Sbjct:   119 ARPRANILLPRPGFPIYELCAKFRHLEVRYVDLLPENGWEIDLDAVEALADENTVALVVI 178

Query:   181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240
             NPGNPCGNVYSYQHL K+AE+A KL  LVIADEVYGHL FG KPFVPMGVFGS VP+LTL
Sbjct:   179 NPGNPCGNVYSYQHLMKIAESAKKLGFLVIADEVYGHLAFGSKPFVPMGVFGSIVPVLTL 238

Query:   241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCI 293
             GSLSKRWIVPGWRLGWFVTTDP G F+ PK++ER KKYFDILG PATFIQ  +
Sbjct:   239 GSLSKRWIVPGWRLGWFVTTDPSGSFKDPKIIERFKKYFDILGGPATFIQAAV 291

GO:0005737 "cytoplasm" evidence=ISM

GO:0008483 "transaminase activity" evidence=ISS

GO:0009058 "biosynthetic process" evidence=ISS

GO:0004838 "L-tyrosine:2-oxoglutarate aminotransferase activity" evidence=IGI;IMP;IDA;TAS

GO:0010189 "vitamin E biosynthetic process" evidence=IEP;IMP

TAIR|locus:2046056 SUR1 "SUPERROOT 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
 Identities = 146/290 (50%), Positives = 199/290 (68%)

Query:     6 GGIDNTG--SIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFXXXXXXXXXXXX 63
             GG D     S +T++G++ +L  +   + N K ++ L  GDP+V+ CF            
Sbjct:    36 GGSDKAAKASTVTLRGVIYMLFDNCGKDVN-KTILPLGHGDPSVYPCFRTCIEAEDAVVD 94

Query:    64 XXXSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP 123
                S K N Y P AG+   RRA+A+Y++RDLP+KLTP D+F+T+GC Q I++    L+RP
Sbjct:    95 VLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARP 154

Query:   124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG 183
              ANILLPRPGFP Y+  AA+  +EVR FDLLP+K WE+DL+ IE++AD+NTVA+V+INP 
Sbjct:   155 NANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVINPN 214

Query:   184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSL 243
             NPCGNVYS+ HL+K+AETA KL  +VI+DEVY   +FGD PFV MG F S VP+LTL  +
Sbjct:   215 NPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGI 274

Query:   244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCI 293
             SK W+VPGW++GW    DP G+F   KV++ +K+  D+  DPAT IQ  +
Sbjct:   275 SKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAAL 324

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA;RCA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

GO:0016846 "carbon-sulfur lyase activity" evidence=IDA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA;IMP

GO:0080108 "S-alkylthiohydroximate lyase activity" evidence=IMP

GO:0001560 "regulation of cell growth by extracellular stimulus" evidence=IMP

GO:0048830 "adventitious root development" evidence=TAS

GO:0016020 "membrane" evidence=IDA

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006546 "glycine catabolic process" evidence=RCA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA

GO:0006766 "vitamin metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA

GO:0009106 "lipoate metabolic process" evidence=RCA

GO:0009108 "coenzyme biosynthetic process" evidence=RCA

GO:0009117 "nucleotide metabolic process" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=IMP;RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0019748 "secondary metabolic process" evidence=RCA

GO:0019760 "glucosinolate metabolic process" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0044272 "sulfur compound biosynthetic process" evidence=RCA

UNIPROTKB|Q9ST02 naat-A "Nicotianamine aminotransferase A" [Hordeum vulgare (taxid:4513)]

 Score = 788 (282.4 bits), Expect = 2.3e-78, P = 2.3e-78
 Identities = 150/287 (52%), Positives = 197/287 (68%)

Query:     5 NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFXXXXXXXXXXXXX 64
             +G +  TG+  +I+ +   +  SV+ E   + V+ LA GDP+V   F             
Sbjct:    49 DGILATTGAKNSIRAIRYKISASVE-ESGPRPVLPLAHGDPSVFPAFRTAVEAEDAVAAA 107

Query:    65 XXSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP- 123
               + +FN YA   GLP  R A+AE+LS+ +PYKL+ +DVF+T+G TQAI+V + +L++  
Sbjct:   108 LRTGQFNCYAAGVGLPAARSAVAEHLSQGVPYKLSADDVFLTAGGTQAIEVIIPVLAQTA 167

Query:   124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG 183
             GANILLPRPG+P YE  AAF  +EVRHFDL+PDKGWE+D+D +ES+AD+NT A+VIINP 
Sbjct:   168 GANILLPRPGYPNYEARAAFNKLEVRHFDLIPDKGWEIDIDSLESIADKNTTAMVIINPN 227

Query:   184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSL 243
             NPCG+VYSY HL K+AE A KL  LVIADEVYG LV G  PF+PMGVFG   P+L++GSL
Sbjct:   228 NPCGSVYSYDHLAKVAEVARKLGILVIADEVYGKLVLGSAPFIPMGVFGHIAPVLSIGSL 287

Query:   244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQ 290
             SK WIVPGWRLGW    DP  +  K K+   +  Y ++  DPATF+Q
Sbjct:   288 SKSWIVPGWRLGWVAVYDPTKILEKTKISTSITNYLNVSTDPATFVQ 334

GO:0033855 "nicotianamine aminotransferase activity" evidence=IDA

UNIPROTKB|Q9ST03 naat-B "Nicotianamine aminotransferase B" [Hordeum vulgare (taxid:4513)]

 Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
 Identities = 148/290 (51%), Positives = 198/290 (68%)

Query:     5 NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFXXXXXXXXXXXXX 64
             +G +  TG+ ++I+ +   +  SV  EK  + V+ LA GDP+V   F             
Sbjct:   139 DGVLAATGANMSIRAIRYKISASVQ-EKGPRPVLPLAHGDPSVFPAFRTAVEAEDAVAAA 197

Query:    65 XXSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP- 123
               + +FN Y    GLP  R A+AE+LS+ +PY L+ +DVF+T+G TQAI+V + +L++  
Sbjct:   198 VRTGQFNCYPAGVGLPAARSAVAEHLSQGVPYMLSADDVFLTAGGTQAIEVIIPVLAQTA 257

Query:   124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG 183
             GANILLPRPG+P YE  AAF  +EVRHFDL+PDKGWE+D+D +ES+AD+NT A+VIINP 
Sbjct:   258 GANILLPRPGYPNYEARAAFNRLEVRHFDLIPDKGWEIDIDSLESIADKNTTAMVIINPN 317

Query:   184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSL 243
             NPCG+VYSY HL K+AE A +L  LVIADEVYG LV G  PF+PMGVFG   P+L++GSL
Sbjct:   318 NPCGSVYSYDHLSKVAEVAKRLGILVIADEVYGKLVLGSAPFIPMGVFGHITPVLSIGSL 377

Query:   244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCI 293
             SK WIVPGWRLGW    DP  + ++ K+   +  Y ++  DPATFIQ  +
Sbjct:   378 SKSWIVPGWRLGWVAVYDPRKILQETKISTSITNYLNVSTDPATFIQAAL 427

GO:0033855 "nicotianamine aminotransferase activity" evidence=IDA

TAIR|locus:2158926 AT5G36160 [Arabidopsis thaliana (taxid:3702)]

 Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
 Identities = 155/325 (47%), Positives = 212/325 (65%)

Query:     4 SNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFXXXXXXXXXXXX 63
             +N  ++ + S+ TI+  L+ L+  +D   + + VI L  GDP+    F            
Sbjct:    13 ANEVVERSNSL-TIRDYLNTLINCLDGG-DVRPVIPLGHGDPSPFPSFRTDQAAVEAICD 70

Query:    64 XXXSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP 123
                S KFN Y+ ++G+P+ R+A+AEYLS DL Y+++PNDV +T+GC QAI++ ++ L+ P
Sbjct:    71 AVRSTKFNNYSSSSGVPVARKAVAEYLSSDLSYQISPNDVHITAGCVQAIEILISALAIP 130

Query:   124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG 183
             GANILLPRP +P+Y+  AAF  +EVR+FDLLP+ GW+VDLD +E+LAD  TVA+++INP 
Sbjct:   131 GANILLPRPTYPMYDSRAAFCQLEVRYFDLLPENGWDVDLDGVEALADDKTVAILVINPC 190

Query:   184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSL 243
             NPCGNV+S QHLQK+AETA KL  LVIADEVY H  FGDKPFV M  F   VP++ LG++
Sbjct:   191 NPCGNVFSRQHLQKIAETACKLGILVIADEVYDHFAFGDKPFVSMAEFAELVPVIVLGAI 250

Query:   244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQ 303
             SKRW VPGWRLGW VT DP G+ +    V+ +    ++  DPATFIQ     G +  I+ 
Sbjct:   251 SKRWFVPGWRLGWMVTLDPHGIMKDSGFVQTLINVVNMSTDPATFIQ-----GAMPDII- 304

Query:   304 IMIHGNFLENFAGSCVPSYKLIPEL 328
                 GN  E F  S +   K   E+
Sbjct:   305 ----GNTKEEFFSSKLEMVKKCAEI 325

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA;IDA

GO:0008483 "transaminase activity" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0004838 "L-tyrosine:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0006559 "L-phenylalanine catabolic process" evidence=IGI

GO:0006572 "tyrosine catabolic process" evidence=IGI

TAIR|locus:2121407 AT4G28420 [Arabidopsis thaliana (taxid:3702)]

 Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
 Identities = 143/290 (49%), Positives = 190/290 (65%)

Query:     7 GIDNTG--SIITIKGMLSLLMQSVD-DEKNEKKVISLAMGDPTVHSCFXXXXXXXXXXXX 63
             G DN    S +T++ ++  L      D K  K ++ LA GDP+V+ C+            
Sbjct:    31 GSDNAAKASSVTMRVIVYKLFDECSLDVK--KPLLPLAHGDPSVYPCYRTSILVENAVVD 88

Query:    64 XXXSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP 123
                S K N Y P AG+   R+A+A+Y++RDL  K+ PNDVF+T GC Q I+V +  L+RP
Sbjct:    89 VLRSGKGNSYGPAAGILPARQAVADYVNRDLTNKVKPNDVFITVGCNQGIEVVLQSLARP 148

Query:   124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG 183
              ANILLPRP +P YE  A +  +EVR FDLLP+K WE+DL  IE++AD+NTVA+VIINP 
Sbjct:   149 NANILLPRPSYPHYEARAVYSGLEVRKFDLLPEKEWEIDLPGIEAMADENTVAMVIINPN 208

Query:   184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSL 243
             NPCGNVYSY HL+K+AETA KL  +VI DEVY   +FGDKPFVPMG F S  P++TLG +
Sbjct:   209 NPCGNVYSYDHLKKVAETAKKLGIMVITDEVYCQTIFGDKPFVPMGEFSSITPVITLGGI 268

Query:   244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCI 293
             SK WIVPGWR+GW    DP G+ +   +V+ +++  DI  D  T +Q  +
Sbjct:   269 SKGWIVPGWRIGWIALNDPRGILKSTGMVQSIQQNLDITPDATTIVQAAL 318

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

TAIR|locus:2121382 AT4G28410 [Arabidopsis thaliana (taxid:3702)]

 Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
 Identities = 125/279 (44%), Positives = 184/279 (65%)

Query:    15 ITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYA 74
             +++KG L+ L      +  +K ++ L  GDP+V+ CF               S   N YA
Sbjct:    49 VSMKGTLARLFDCCSKDV-KKTILPLGHGDPSVYPCFQTSVDAEEAVVESLRSGAANSYA 107

Query:    75 PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGF 134
             P  G+   RRA+A YL+RDLP+K+  +D+F+T GC Q I+  +  L+ P ANILLP   +
Sbjct:   108 PGVGILPARRAVANYLNRDLPHKIHSDDIFMTVGCCQGIETMIHALAGPKANILLPTLIY 167

Query:   135 PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194
             P+Y   A    +E+R ++LLPD  WE+DL  +E++AD+NT+A+VI+NP NPCGNVY+Y+H
Sbjct:   168 PLYNSHAIHSLVEIRKYNLLPDLDWEIDLQGVEAMADENTIAVVIMNPHNPCGNVYTYEH 227

Query:   195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL 254
             L+K+AE A KL  +VI+DEVY   ++G+  FVPMG+F S  P++TLGS+SK W+VPGWR+
Sbjct:   228 LKKVAEVARKLGIMVISDEVYNQTIYGENKFVPMGIFSSITPVVTLGSISKGWLVPGWRI 287

Query:   255 GWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCI 293
             GW    DP  +F+  +VVE +K++ DI  DP+T +Q  +
Sbjct:   288 GWIAMNDPKNVFKTTRVVESIKEHLDISPDPSTILQFAL 326

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

TAIR|locus:2047441 TAT3 "tyrosine aminotransferase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
 Identities = 123/257 (47%), Positives = 172/257 (66%)

Query:    35 KKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
             K ++    G+P+ HS F               S   N YAP+ G+   RRA+AEYL+ +L
Sbjct:    49 KTILFPTPGEPSAHSNFRTCPEAEEAVAAAARSGMANSYAPSPGVFKARRAVAEYLNGEL 108

Query:    95 PYKLTPNDVFVTSGCTQAIDVAM-ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL 153
             P KL   DV++T GC QAI++ + +L   P ANILLPRPG+P Y+  A +  +E+R +DL
Sbjct:   109 PTKLKAEDVYITGGCNQAIEIVIDSLAGNPSANILLPRPGYPHYDARAVYSGLEIRKYDL 168

Query:   154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
             LP+  WE++LD +E+ AD+NTVA+VIINP NPCGNVY+Y HL K+AE A KL  ++I+DE
Sbjct:   169 LPESDWEINLDGLEAAADENTVAMVIINPNNPCGNVYTYDHLNKVAEMARKLGIMIISDE 228

Query:   214 VYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273
             VY H+V+GDKPF+PMG F S  P++TLGS+SK W+ PGWR+GW    DP G+F    VV+
Sbjct:   229 VYDHVVYGDKPFIPMGKFASIAPVITLGSISKGWVNPGWRVGWIAMNDPNGIFVSTGVVQ 288

Query:   274 RMKKYFDILGDPATFIQ 290
              ++ + D+   P+  +Q
Sbjct:   289 AIEDFLDLTPQPSFILQ 305

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP;RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0004838 "L-tyrosine:2-oxoglutarate aminotransferase activity" evidence=ISS

TAIR|locus:2128434 AT4G23590 [Arabidopsis thaliana (taxid:3702)]

 Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
 Identities = 113/223 (50%), Positives = 161/223 (72%)

Query:    71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP 130
             N YAP+ GLP+ +RA+AEYL+RDL  KLT +DV++T GC QAI++A+++L++P ANILLP
Sbjct:    71 NAYAPSIGLPVAKRAVAEYLNRDLDNKLTGDDVYMTVGCKQAIELAVSILAKPKANILLP 130

Query:   131 RPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVY 190
             RPGFP   + + ++H+EVR ++ +P++ +E+D + +  + D+NT A+ IINP NP GN Y
Sbjct:   131 RPGFPWDMVHSIYKHLEVRRYEFIPERDFEIDFNSVREMVDENTFAIFIINPHNPNGNYY 190

Query:   191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP 250
             +  HL++LA  A +L  +V++DEVY   VFG  PFVPMG F S VP++TLGS+SK WIVP
Sbjct:   191 TEAHLKQLATLARELGIMVVSDEVYRWSVFGSNPFVPMGKFSSIVPVITLGSISKGWIVP 250

Query:   251 GWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCI 293
             GWR GW    D  G+FR  KV++  K++ +I   P T IQ  I
Sbjct:   251 GWRTGWLALHDLNGVFRSTKVLKAAKEFLEITSKPPTVIQAAI 293

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA;ISS

GO:0009058 "biosynthetic process" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

TAIR|locus:2128459 CORI3 "CORONATINE INDUCED 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
 Identities = 112/223 (50%), Positives = 158/223 (70%)

Query:    71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP 130
             N YAP+ GL   + A+AEYL++ LP KLT +DVF+T GC QAI++A+ +L++P AN+LLP
Sbjct:    71 NAYAPSLGLAAAKSAVAEYLNQGLPKKLTADDVFMTLGCKQAIELAVDILAKPKANVLLP 130

Query:   131 RPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVY 190
              PGFP   + + ++++EVRH++ LP+K +E+D D + +L D+NT A+ IINP NP GN Y
Sbjct:   131 SPGFPWDLVRSIYKNLEVRHYNFLPEKNFEIDFDSVRALVDENTFAIFIINPHNPNGNTY 190

Query:   191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP 250
             S  HL++LAE A +LK +V++DEV+   +FG  PFVPMG F S VP++TLGS+SK W VP
Sbjct:   191 SEAHLKQLAELAKELKIMVVSDEVFRWTLFGSNPFVPMGKFSSIVPVVTLGSISKGWKVP 250

Query:   251 GWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCI 293
             GWR GW    D  G+FR  KV++  + +  I  +P T IQ  I
Sbjct:   251 GWRTGWLTLHDLDGVFRNTKVLQAAQDFLQINNNPPTVIQAAI 293

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=IEA;IEP

GO:0008483 "transaminase activity" evidence=IEA;ISS;NAS

GO:0009058 "biosynthetic process" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016847 "1-aminocyclopropane-1-carboxylate synthase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0042218 "1-aminocyclopropane-1-carboxylate biosynthetic process" evidence=IEA

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

GO:0010188 "response to microbial phytotoxin" evidence=IEP

GO:0004021 "L-alanine:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0004121 "cystathionine beta-lyase activity" evidence=IDA

GO:0004838 "L-tyrosine:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0042538 "hyperosmotic salinity response" evidence=TAS

GO:0050362 "L-tryptophan:2-oxoglutarate aminotransferase activity" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0009611 "response to wounding" evidence=IEP

GO:0048046 "apoplast" evidence=IDA

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0006546 "glycine catabolic process" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA

GO:0006766 "vitamin metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA

GO:0009106 "lipoate metabolic process" evidence=RCA

GO:0009108 "coenzyme biosynthetic process" evidence=RCA

GO:0009117 "nucleotide metabolic process" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019748 "secondary metabolic process" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0044272 "sulfur compound biosynthetic process" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FN30	TAT2_ARATH	2, ., 6, ., 1, ., -	0.7337	0.8425	0.6980	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.6.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AMT7	aminotransferase family protein (EC-2.6.1.5) (407 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	fgenesh4_pm.C_LG_II000277	4-hydroxyphenylpyruvate dioxygenase (EC-1.13.11.27) (444 aa)						•			0.910
	eugene3.00051120	4-hydroxyphenylpyruvate dioxygenase (343 aa)						•			0.903
	gw1.XII.71.1	hypothetical protein (321 aa)						•			0.899
	gw1.X.450.1	hypothetical protein (323 aa)						•			0.899
	gw1.VIII.466.1	hypothetical protein (305 aa)						•			0.899
	gw1.VII.698.1	hypothetical protein (302 aa)						•			0.899
	gw1.IV.2899.1	hypothetical protein (306 aa)						•			0.899
	gw1.III.1437.1	hypothetical protein (291 aa)						•			0.899
	gw1.II.2473.1	hypothetical protein (303 aa)						•			0.899
	gw1.28.655.1	annotation not avaliable (78 aa)						•			0.899

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	343
PLN02656	409	PLN02656, PLN02656, tyrosine transaminase	0.0
PLN00145	430	PLN00145, PLN00145, tyrosine/nicotianamine aminotr	1e-153
TIGR01265	403	TIGR01265, tyr_nico_aTase, tyrosine/nicotianamine	1e-138
PLN00143	409	PLN00143, PLN00143, tyrosine/nicotianamine aminotr	1e-131
PLN02187	462	PLN02187, PLN02187, rooty/superroot1	1e-112
TIGR01264	401	TIGR01264, tyr_amTase_E, tyrosine aminotransferase	2e-88
cd00609	350	cd00609, AAT_like, Aspartate aminotransferase fami	3e-65
PTZ00433	412	PTZ00433, PTZ00433, tyrosine aminotransferase; Pro	7e-65
COG0436	393	COG0436, COG0436, Aspartate/tyrosine/aromatic amin	1e-59
pfam00155	357	pfam00155, Aminotran_1_2, Aminotransferase class I	3e-46
PRK05764	393	PRK05764, PRK05764, aspartate aminotransferase; Pr	8e-45
PRK08363	398	PRK08363, PRK08363, alanine aminotransferase; Vali	2e-42
PRK09265	404	PRK09265, PRK09265, aminotransferase AlaT; Validat	2e-33
COG1167	459	COG1167, ARO8, Transcriptional regulators containi	3e-31
PRK06108	382	PRK06108, PRK06108, aspartate aminotransferase; Pr	1e-28
PTZ00377	481	PTZ00377, PTZ00377, alanine aminotransferase; Prov	2e-28
PRK08361	391	PRK08361, PRK08361, aspartate aminotransferase; Pr	3e-28
PRK13355	517	PRK13355, PRK13355, bifunctional HTH-domain contai	1e-27
PRK07682	378	PRK07682, PRK07682, hypothetical protein; Validate	6e-27
PRK07777	387	PRK07777, PRK07777, aminotransferase; Validated	1e-26
PRK06348	384	PRK06348, PRK06348, aspartate aminotransferase; Pr	1e-26
PRK07568	397	PRK07568, PRK07568, aspartate aminotransferase; Pr	2e-26
PRK06855	433	PRK06855, PRK06855, aminotransferase; Validated	2e-26
COG0079	356	COG0079, HisC, Histidinol-phosphate/aromatic amino	1e-25
PRK07309	391	PRK07309, PRK07309, aromatic amino acid aminotrans	4e-24
PLN00175	413	PLN00175, PLN00175, aminotransferase family protei	5e-24
PRK07550	386	PRK07550, PRK07550, hypothetical protein; Provisio	5e-24
PRK07683	387	PRK07683, PRK07683, aminotransferase A; Validated	2e-23
PRK08960	387	PRK08960, PRK08960, hypothetical protein; Provisio	2e-23
PRK08912	387	PRK08912, PRK08912, hypothetical protein; Provisio	3e-23
TIGR01141	346	TIGR01141, hisC, histidinol-phosphate aminotransfe	3e-21
TIGR03538	393	TIGR03538, DapC_gpp, succinyldiaminopimelate trans	9e-21
PLN02368	407	PLN02368, PLN02368, alanine transaminase	9e-21
PRK05957	389	PRK05957, PRK05957, aspartate aminotransferase; Pr	1e-19
PRK06836	394	PRK06836, PRK06836, aspartate aminotransferase; Pr	3e-19
PRK14809	357	PRK14809, PRK14809, histidinol-phosphate aminotran	3e-19
TIGR03540	383	TIGR03540, DapC_direct, LL-diaminopimelate aminotr	4e-19
COG1168	388	COG1168, MalY, Bifunctional PLP-dependent enzyme w	1e-18
TIGR03947	359	TIGR03947, viomycin_VioD, capreomycidine synthase	3e-18
PRK07324	373	PRK07324, PRK07324, transaminase; Validated	9e-18
PRK06107	402	PRK06107, PRK06107, aspartate aminotransferase; Pr	2e-17
PRK07337	388	PRK07337, PRK07337, aminotransferase; Validated	3e-17
TIGR03539	357	TIGR03539, DapC_actino, succinyldiaminopimelate tr	5e-17
PRK08175	395	PRK08175, PRK08175, aminotransferase; Validated	8e-17
PRK09082	386	PRK09082, PRK09082, methionine aminotransferase; V	9e-17
PRK09276	385	PRK09276, PRK09276, LL-diaminopimelate aminotransf	2e-16
PRK09147	396	PRK09147, PRK09147, succinyldiaminopimelate transa	2e-16
PRK06225	380	PRK06225, PRK06225, aspartate aminotransferase; Pr	5e-16
PLN02231	534	PLN02231, PLN02231, alanine transaminase	8e-16
PRK07865	364	PRK07865, PRK07865, N-succinyldiaminopimelate amin	3e-15
PRK12414	384	PRK12414, PRK12414, putative aminotransferase; Pro	4e-15
PRK09148	405	PRK09148, PRK09148, aminotransferase; Validated	6e-15
TIGR04350	384	TIGR04350, C_S_lyase_PatB, putative C-S lyase	2e-14
TIGR03542	402	TIGR03542, DAPAT_plant, LL-diaminopimelate aminotr	2e-14
TIGR01140	330	TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phospha	3e-14
TIGR03537	350	TIGR03537, DapC, succinyldiaminopimelate transamin	4e-14
PRK05839	374	PRK05839, PRK05839, hypothetical protein; Provisio	5e-13
PRK08068	389	PRK08068, PRK08068, transaminase; Reviewed	7e-13
PRK07681	399	PRK07681, PRK07681, aspartate aminotransferase; Pr	3e-11
PRK06290	410	PRK06290, PRK06290, aspartate aminotransferase; Pr	3e-11
PRK05942	394	PRK05942, PRK05942, aspartate aminotransferase; Pr	3e-11
PRK01533	366	PRK01533, PRK01533, histidinol-phosphate aminotran	9e-11
PRK03158	359	PRK03158, PRK03158, histidinol-phosphate aminotran	9e-10
PLN02376	496	PLN02376, PLN02376, 1-aminocyclopropane-1-carboxyl	1e-09
PRK06358	354	PRK06358, PRK06358, threonine-phosphate decarboxyl	1e-09
PRK05166	371	PRK05166, PRK05166, histidinol-phosphate aminotran	4e-09
PRK09440	416	PRK09440, avtA, valine--pyruvate transaminase; Pro	4e-09
PRK01688	351	PRK01688, PRK01688, histidinol-phosphate aminotran	5e-09
PLN02450	468	PLN02450, PLN02450, 1-aminocyclopropane-1-carboxyl	5e-09
PRK07392	360	PRK07392, PRK07392, threonine-phosphate decarboxyl	5e-09
PRK09275	527	PRK09275, PRK09275, aspartate aminotransferase; Pr	8e-09
PLN02607	447	PLN02607, PLN02607, 1-aminocyclopropane-1-carboxyl	1e-08
PRK02731	367	PRK02731, PRK02731, histidinol-phosphate aminotran	1e-08
TIGR03801	521	TIGR03801, asp_4_decarbox, aspartate 4-decarboxyla	2e-08
PRK08637	388	PRK08637, PRK08637, hypothetical protein; Provisio	2e-08
PRK14807	351	PRK14807, PRK14807, histidinol-phosphate aminotran	2e-08
PLN03026	380	PLN03026, PLN03026, histidinol-phosphate aminotran	4e-08
PRK06207	405	PRK06207, PRK06207, aspartate aminotransferase; Pr	4e-08
PRK08056	356	PRK08056, PRK08056, threonine-phosphate decarboxyl	4e-08
PRK07590	409	PRK07590, PRK07590, L,L-diaminopimelate aminotrans	4e-08
PRK03967	337	PRK03967, PRK03967, histidinol-phosphate aminotran	5e-08
PRK07908	349	PRK07908, PRK07908, hypothetical protein; Provisio	6e-08
PRK04870	356	PRK04870, PRK04870, histidinol-phosphate aminotran	1e-07
COG3977	417	COG3977, COG3977, Alanine-alpha-ketoisovalerate (o	1e-07
PRK00950	361	PRK00950, PRK00950, histidinol-phosphate aminotran	1e-07
PRK08636	403	PRK08636, PRK08636, aspartate aminotransferase; Pr	2e-07
PRK04781	364	PRK04781, PRK04781, histidinol-phosphate aminotran	5e-07
PRK08354	311	PRK08354, PRK08354, putative aminotransferase; Pro	4e-06
PRK06425	332	PRK06425, PRK06425, histidinol-phosphate aminotran	1e-05
PRK09105	370	PRK09105, PRK09105, putative aminotransferase; Pro	4e-05
PRK04635	354	PRK04635, PRK04635, histidinol-phosphate aminotran	5e-05
COG1448	396	COG1448, TyrB, Aspartate/tyrosine/aromatic aminotr	7e-05
COG0626	396	COG0626, MetC, Cystathionine beta-lyases/cystathio	1e-04
cd00614	369	cd00614, CGS_like, CGS_like: Cystathionine gamma-s	4e-04
COG2008	342	COG2008, GLY1, Threonine aldolase [Amino acid tran	4e-04
pfam00266	370	pfam00266, Aminotran_5, Aminotransferase class-V	0.001
PRK00451	447	PRK00451, PRK00451, glycine dehydrogenase subunit	0.001
cd01494	170	cd01494, AAT_I, Aspartate aminotransferase (AAT) s	0.004
PRK02610	374	PRK02610, PRK02610, histidinol-phosphate aminotran	0.004

>gnl|CDD|178262 PLN02656, PLN02656, tyrosine transaminase

 Score =  542 bits (1398), Expect = 0.0
 Identities = 237/320 (74%), Positives = 267/320 (83%), Gaps = 5/320 (1%)

Query: 10  NTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK 69
           +T   ITIKG+LSLLM+S+DDE+N K+VISL MGDPT +SCFHTTHVA EAV +AL S K
Sbjct: 6   DTTKTITIKGILSLLMESIDDEENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNK 65

Query: 70  FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILL 129
           FNGYAPT GLP  RRAIAEYLSRDLPYKL+ +DVF+TSGCTQAIDVA+++L+RPGANILL
Sbjct: 66  FNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLARPGANILL 125

Query: 130 PRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV 189
           PRPGFPIYEL AAFRH+EVR+ DLLP+KGWEVDLD +E+LADQNTVALVIINPGNPCGNV
Sbjct: 126 PRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVALVIINPGNPCGNV 185

Query: 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV 249
           YSYQHL+K+AETA KLK LVIADEVYGHL FG  PFVPMGVFGS VP+LTLGSLSKRWIV
Sbjct: 186 YSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIV 245

Query: 250 PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQV---CIMYGCLSTIMQIMI 306
           PGWRLGWFVTTDP G FR PK+VER+KKYFDILG PATFIQ     I+     +  +  I
Sbjct: 246 PGWRLGWFVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAVPTILEQTDESFFKKTI 305

Query: 307 HGNFLENFAGSCVPSYKLIP 326
             N L+  +  C    K IP
Sbjct: 306 --NILKQSSDICCDRIKEIP 323

Length = 409

>gnl|CDD|215074 PLN00145, PLN00145, tyrosine/nicotianamine aminotransferase; Provisional

 Score =  436 bits (1123), Expect = e-153
 Identities = 164/275 (59%), Positives = 212/275 (77%)

Query: 16  TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP 75
           +I+ +L+ +   VD     + V+ L  GDP+   CF T   A +AVA AL S K+N Y+ 
Sbjct: 33  SIRAVLNRVKACVDAGGGPRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYST 92

Query: 76  TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
             GL   RRAIAEYLSRDLPY+L+ +D+++T+GC QAI++ M++L++PGANILLPRPG+P
Sbjct: 93  CVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYP 152

Query: 136 IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHL 195
           +YE  A F  +EVRHFDLLP++GWEVDL+ +E+LAD+NTVA+VIINP NPCG+VYSY+HL
Sbjct: 153 LYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENTVAMVIINPNNPCGSVYSYEHL 212

Query: 196 QKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG 255
            K+AETA KL  LVIADEVY HL FG KPFVPMGVFG   P+LTLGS+SKRW+VPGWRLG
Sbjct: 213 AKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLG 272

Query: 256 WFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQ 290
           W  T DP G+ ++ KVV+ ++ Y +I  DPATF+Q
Sbjct: 273 WIATCDPNGILKETKVVDSIRNYLNISTDPATFVQ 307

Length = 430

>gnl|CDD|188123 TIGR01265, tyr_nico_aTase, tyrosine/nicotianamine family aminotransferase

 Score =  396 bits (1020), Expect = e-138
 Identities = 152/270 (56%), Positives = 195/270 (72%), Gaps = 6/270 (2%)

Query: 34  EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
           EK VI L+ GDP+V     T   A EAV +AL S KFNGYAP+ G    R A+AEYLS D
Sbjct: 30  EKPVIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSD 89

Query: 94  LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL 153
           LP KLT +DV +TSGC+QAI++ +  L+ PGANIL+PRPGFP+Y+  AAF  +EVR +DL
Sbjct: 90  LPGKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDL 149

Query: 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
           LP+K WE+DLD +ESLAD+ TVA+V+INP NPCG+V+S  HLQK+AE A KL   +IADE
Sbjct: 150 LPEKDWEIDLDGLESLADEKTVAIVVINPSNPCGSVFSRDHLQKIAEVAEKLGIPIIADE 209

Query: 214 VYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273
           +YGH+VFGD PF+PM  F S VP+L+LG +SKRW+VPGWRLGW +  DP G+FR   V++
Sbjct: 210 IYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRD-TVLQ 268

Query: 274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQ 303
            +K     +  PAT +Q     G L  I++
Sbjct: 269 GLKNLLQRILGPATIVQ-----GALPDILE 293

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley. Length = 403

>gnl|CDD|165711 PLN00143, PLN00143, tyrosine/nicotianamine aminotransferase; Provisional

 Score =  380 bits (977), Expect = e-131
 Identities = 159/278 (57%), Positives = 210/278 (75%), Gaps = 1/278 (0%)

Query: 16  TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP 75
           +I   +  L ++ + E + +  IS   GDP+   CF TT++A +A+ EA+ S KFN YAP
Sbjct: 14  SIDDAVKFLKENFN-EDDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAP 72

Query: 76  TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
           T G+   RRAIA+YLS DLPY+L+P+DV++T GC  A ++ + +L+RP ANILLPRPGFP
Sbjct: 73  TGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFP 132

Query: 136 IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHL 195
             E  A F H+E+RHFDLLP+KGWEVDLD +E++AD+NT+A+VIINPGNPCG+VYSY+HL
Sbjct: 133 DVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAMVIINPGNPCGSVYSYEHL 192

Query: 196 QKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG 255
            K+AETA KL  LVIADEVYGH+VFG KPFVPMG+F S VP++TLGS+SKRW++PGW LG
Sbjct: 193 NKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLG 252

Query: 256 WFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCI 293
           W VT DP G+ +  ++ + +KK  +    P TFIQ  I
Sbjct: 253 WLVTCDPSGLLQICEIADSIKKALNPAPFPPTFIQAAI 290

Length = 409

>gnl|CDD|215119 PLN02187, PLN02187, rooty/superroot1

 Score =  334 bits (857), Expect = e-112
 Identities = 151/290 (52%), Positives = 206/290 (71%), Gaps = 3/290 (1%)

Query: 6   GGIDNTG--SIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAE 63
           GG D     S +T++G++ +L  +   + N K ++ L  GDP+V+ CF T   A +AV +
Sbjct: 36  GGSDKAAKASTVTLRGVIYMLFDNCGKDVN-KTILPLGHGDPSVYPCFRTCIEAEDAVVD 94

Query: 64  ALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP 123
            L S K N Y P AG+   RRA+A+Y++RDLP+KLTP D+F+T+GC Q I++    L+RP
Sbjct: 95  VLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARP 154

Query: 124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG 183
            ANILLPRPGFP Y+  AA+  +EVR FDLLP+K WE+DL+ IE++AD+NTVA+V+INP 
Sbjct: 155 NANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVINPN 214

Query: 184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSL 243
           NPCGNVYS+ HL+K+AETA KL  +VI+DEVY   +FGD PFV MG F S VP+LTL  +
Sbjct: 215 NPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGI 274

Query: 244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCI 293
           SK W+VPGW++GW    DP G+F   KV++ +K+  D+  DPAT IQ  +
Sbjct: 275 SKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAAL 324

Length = 462

>gnl|CDD|188122 TIGR01264, tyr_amTase_E, tyrosine aminotransferase, eukaryotic

 Score =  270 bits (693), Expect = 2e-88
 Identities = 129/310 (41%), Positives = 183/310 (59%), Gaps = 16/310 (5%)

Query: 34  EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
           EK VI L++GDPTV     T     +A+ ++L S K+NGYAPT G    R AIA Y   +
Sbjct: 30  EKPVIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASY-YHN 88

Query: 94  LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL 153
               +  +DV + SGC+ AI++ +A L+  G NIL+PRPGFP+Y   A    IEV+ ++L
Sbjct: 89  PDGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYRTLAESMGIEVKLYNL 148

Query: 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
           LPDK WE+DL  +ESL D+ T ALV+ NP NPCG+V+S QHL+++   A +    +IADE
Sbjct: 149 LPDKSWEIDLKQLESLIDEKTAALVVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADE 208

Query: 214 VYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV-V 272
           +YG +VF    F P+    S VPIL+ G L+KRW+VPGWRLGW +  D  G+ R  +  +
Sbjct: 209 IYGDMVFSGATFEPVASLSSNVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGL 268

Query: 273 ERMKKYFDILGDPATFIQVCIMYGCLSTIM----QIMIHG--NFLENFAGSCVPSYKLIP 326
            ++ +   ILG P T +Q     G L +I+    Q    G  + LE+ A  C  +   +P
Sbjct: 269 VKLSQR--ILG-PCTIVQ-----GALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVP 320

Query: 327 ELINFKSTGS 336
            L     +G+
Sbjct: 321 GLQPVMPSGA 330

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs [Energy metabolism, Amino acids and amines]. Length = 401

>gnl|CDD|99734 cd00609, AAT_like, Aspartate aminotransferase family

 Score =  209 bits (534), Expect = 3e-65
 Identities = 83/255 (32%), Positives = 129/255 (50%), Gaps = 12/255 (4%)

Query: 38  ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYK 97
           I L++G+P     F       EA+A A L     GY P  GLP  R AIAE+L R     
Sbjct: 1   IDLSIGEPD----FPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVD 56

Query: 98  LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK 157
           + P ++ VT+G  +A+ + +  L  PG  +L+P P +P YE +A     EV    L  + 
Sbjct: 57  VPPEEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEG 116

Query: 158 GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH 217
           G+ +DL+ +E+     T  L + NP NP G V S + L++LAE A K   L+I+DE Y  
Sbjct: 117 GFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAE 176

Query: 218 LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK 277
           LV+  +P   + +  +   ++ L S SK + +PG R+G+ +           +++ER+KK
Sbjct: 177 LVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPP-------EELLERLKK 229

Query: 278 YFD-ILGDPATFIQV 291
                   P+T  Q 
Sbjct: 230 LLPYTTSGPSTLSQA 244

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein. Length = 350

>gnl|CDD|185613 PTZ00433, PTZ00433, tyrosine aminotransferase; Provisional

 Score =  210 bits (536), Expect = 7e-65
 Identities = 97/262 (37%), Positives = 149/262 (56%), Gaps = 8/262 (3%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
           K +I L++GDPT+     T  + T+A+ EA+ S++ NGY PT G P  R A+A Y     
Sbjct: 33  KSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSF 92

Query: 95  PYK------LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEV 148
            +K      +  ++V + SG + AI +A+  L   G NIL+P PGFP YE       IE+
Sbjct: 93  VHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEM 152

Query: 149 RHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTL 208
           R ++  P+K WE DLD+I  L D  T AL++ NP NPCG+ +S +H++ +     +L+  
Sbjct: 153 RFYNCRPEKDWEADLDEIRRLVDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLP 212

Query: 209 VIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK 268
           +I+DE+Y  +VF    F  +  F +TVP + LG  +K  +VPGWRLGW +  DP G    
Sbjct: 213 LISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGN--G 270

Query: 269 PKVVERMKKYFDILGDPATFIQ 290
              ++ MK+   ++  P + +Q
Sbjct: 271 GDFLDGMKRLGMLVCGPCSVVQ 292

Length = 412

>gnl|CDD|223513 COG0436, COG0436, Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

 Score =  196 bits (500), Expect = 1e-59
 Identities = 79/266 (29%), Positives = 131/266 (49%), Gaps = 16/266 (6%)

Query: 30  DEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEY 89
           + K ++ VI L++G+P     F T     EA  EAL       Y P+AG+P  R AIAE 
Sbjct: 23  ELKGKEDVIDLSIGEPD----FPTPEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEK 77

Query: 90  LSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEV 148
             R     + P  ++ VT+G  +A+ +A   L  PG  +L+P PG+P YE +      + 
Sbjct: 78  YKRRYGLDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKP 137

Query: 149 RHFDLL-PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207
               L   + G++ DL+D+E+     T A+++ +P NP G VYS + L+ + E A +   
Sbjct: 138 VPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDI 197

Query: 208 LVIADEVYGHLVFGDKPFVPMG-VFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF 266
           ++I+DE+Y  LV+       +  + G+    +T+ S SK + + GWR+GW V        
Sbjct: 198 IIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVG------- 250

Query: 267 RKPKVVERMKKYFDILGD-PATFIQV 291
              +++  ++K    L     T  Q 
Sbjct: 251 PPEELIAALRKLKSYLTSCAPTPAQY 276

Length = 393

>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II

 Score =  160 bits (407), Expect = 3e-46
 Identities = 72/263 (27%), Positives = 111/263 (42%), Gaps = 21/263 (7%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
              I+L   +    S   T     +A  +AL     N Y PT GLP  R A+A++L R  
Sbjct: 1   TDKINLGSNEYLGDS--GTLPAVAKAEKDALAGGTRNLYGPTDGLPELREALAKFLGRSP 58

Query: 95  PYKLTPND-VFVTSGCTQAIDVAMALLSR-PGANILLPRPGFPIYELSAAFRHIEVRHFD 152
             KL     V   SG    I+  + LL   PG  IL+P P +P Y         EV  + 
Sbjct: 59  VLKLDREAAVVFGSGAGANIEALIFLLRLNPGDAILVPAPTYPSYIRIFRLAGGEVVRYP 118

Query: 153 LLPDKGWEVDLDDIESLADQNTVALVII---NPGNPCGNVYSYQHLQKLAETANKLKTLV 209
           L     + +D D +E+   + T    ++   +P NP G V + + L+KL + A +   L+
Sbjct: 119 LYSSNDFHLDFDALEAALKEATEGNKVVLHTSPHNPTGTVATLEELEKLLDLAKEHNILL 178

Query: 210 IADEVYGHLVFGDKPFVPMGVFGST-VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK 268
           + DE Y   VFG    V      +    +L +GS SK + + GWR+G+ +          
Sbjct: 179 LVDEAYAGFVFGSLDAVATRALLAEGPNLLVVGSFSKAFGLAGWRVGYILGNAA------ 232

Query: 269 PKVVERMKK-----YFDILGDPA 286
             V+ +++K     Y       A
Sbjct: 233 --VISQLRKLARPFYSSTHLQAA 253

Length = 357

>gnl|CDD|235596 PRK05764, PRK05764, aspartate aminotransferase; Provisional

 Score =  157 bits (400), Expect = 8e-45
 Identities = 71/229 (31%), Positives = 108/229 (47%), Gaps = 13/229 (5%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
           + VISL  G+P     F T     EA  EAL  +    Y P AG+P  R AIA  L RD 
Sbjct: 31  RDVISLGAGEPD----FDTPEHIKEAAIEALD-DGKTKYTPAAGIPELREAIAAKLKRDN 85

Query: 95  PYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL 154
                P+ V VT+G  QA+  A   L  PG  +++P P +  Y                 
Sbjct: 86  GLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTG 145

Query: 155 PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEV 214
            + G+++ ++ +E+     T AL++ +P NP G VYS + L+ +A+ A +    V++DE+
Sbjct: 146 EENGFKLTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEI 205

Query: 215 YGHLVFGDKPFVPMGVFGSTVP-----ILTLGSLSKRWIVPGWRLGWFV 258
           Y  LV+    F  +    S  P      +T+   SK + + GWRLG+  
Sbjct: 206 YEKLVYDGAEFTSI---ASLSPELRDRTITVNGFSKAYAMTGWRLGYAA 251

Length = 393

>gnl|CDD|181402 PRK08363, PRK08363, alanine aminotransferase; Validated

 Score =  151 bits (382), Expect = 2e-42
 Identities = 80/232 (34%), Positives = 117/232 (50%), Gaps = 3/232 (1%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
           EK   KVI L +GDP V   F       EA   A+  E  N Y P+ GLP  R AI +  
Sbjct: 26  EKKGIKVIRLNIGDP-VKFDFQPPEHMKEAYCRAI-KEGHNYYGPSEGLPELREAIVKRE 83

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
            R     +TP+DV VT+  T+A+ +    L  PG  IL+P P +P Y     F       
Sbjct: 84  KRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVE 143

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
           +  + ++GW+ D+DDI     + T A+ +INP NP G +Y  + L+++ + A +    VI
Sbjct: 144 YRTIEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVI 203

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP 262
           +DE+Y  + +  K  V  G     VP++ +  LSK +   GWRLG+    DP
Sbjct: 204 SDEIYDLMTYEGK-HVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDP 254

Length = 398

>gnl|CDD|181738 PRK09265, PRK09265, aminotransferase AlaT; Validated

 Score =  126 bits (320), Expect = 2e-33
 Identities = 62/193 (32%), Positives = 107/193 (55%), Gaps = 4/193 (2%)

Query: 72  GYAPTAGLPLTRRAIA-EYLSRDLPYKLTPNDVFVTSGCTQAIDVAM-ALLSRPGANILL 129
           GY+ + GL   R+AI   Y  + +P  +  +D+++ +G ++ I +AM ALL+  G  +L+
Sbjct: 67  GYSDSKGLFSARKAIMQYYQQKGIP-DVDVDDIYIGNGVSELIVMAMQALLN-NGDEVLV 124

Query: 130 PRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV 189
           P P +P++  + +    +  H+    + GW  DLDDI S     T A+VIINP NP G V
Sbjct: 125 PAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAV 184

Query: 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV 249
           YS + L+++ E A +   ++ ADE+Y  +++     + +      +  +T   LSK + V
Sbjct: 185 YSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRV 244

Query: 250 PGWRLGWFVTTDP 262
            G+R+GW V + P
Sbjct: 245 AGFRVGWMVLSGP 257

Length = 404

>gnl|CDD|224089 COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

 Score =  122 bits (307), Expect = 3e-31
 Identities = 62/201 (30%), Positives = 89/201 (44%), Gaps = 8/201 (3%)

Query: 61  VAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL 120
           V     +     Y PTAGLP  R AIA YL         P  + +TSG  QA+D+ + LL
Sbjct: 116 VLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLL 175

Query: 121 SRPGANILLPRPGFPIYELSAAFRHIEVRHFDL-LPDKGWEVDLDDIESLADQNTVALVI 179
             PG  +L+  P +P      A   +  R   + + + G   D + +E    Q     V 
Sbjct: 176 LDPGDTVLVEDPTYP--GALQALEALGARVIPVPVDEDGI--DPEALEEALAQWKPKAVY 231

Query: 180 INP--GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI 237
           + P   NP G   S +  + L   A K   L+I D+ YG L +   P  P+    +   +
Sbjct: 232 VTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRV 291

Query: 238 LTLGSLSKRWIVPGWRLGWFV 258
           + LGS SK  + PG RLG+ V
Sbjct: 292 IYLGSFSKT-LAPGLRLGYVV 311

Length = 459

>gnl|CDD|180404 PRK06108, PRK06108, aspartate aminotransferase; Provisional

 Score =  113 bits (285), Expect = 1e-28
 Identities = 63/208 (30%), Positives = 90/208 (43%), Gaps = 14/208 (6%)

Query: 59  EAVAEALLS-EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAM 117
           +A A AL   E F  Y    G+P  R A+A Y+SR       P  + VTS   QA+ +A 
Sbjct: 44  DAAAAALADGETF--YTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAA 101

Query: 118 ALLSRPGANILLPRPGFP-----IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ 172
             L  PG  ++   P +P        L A    + +         GW +DLD + +    
Sbjct: 102 QALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDF----GGGGWTLDLDRLLAAITP 157

Query: 173 NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP--MGV 230
            T AL I +P NP G   S   L+ +     +    ++ADEVY  L +      P  + +
Sbjct: 158 RTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDI 217

Query: 231 FGSTVPILTLGSLSKRWIVPGWRLGWFV 258
                 I+ + S SK W + GWRLGW V
Sbjct: 218 AEPDDRIIFVNSFSKNWAMTGWRLGWLV 245

Length = 382

>gnl|CDD|240391 PTZ00377, PTZ00377, alanine aminotransferase; Provisional

 Score =  114 bits (287), Expect = 2e-28
 Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 14/196 (7%)

Query: 42  MGDPTVHSCFHTTHVATEAVAEALLSEKFNG---YAPTAGLPLTRRAIAEYLSRDLPYKL 98
           + DP+V S F    VA    A+  L+    G   Y  +AG P  R+A+A ++ R      
Sbjct: 80  LEDPSVSSLFPADVVAR---AKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPK 136

Query: 99  TPNDVFVTSGCTQAIDVAM-ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK 157
            P+D+F+T G +  I + +  L+  P   +++P P +P+Y  +      +   + L  +K
Sbjct: 137 DPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEK 196

Query: 158 GWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211
           GW +D +++E   +Q         ALV+INPGNP G V +   ++++ +   +   +++A
Sbjct: 197 GWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMA 256

Query: 212 DEVYGHLVF-GDKPFV 226
           DEVY   ++ G+KPF+
Sbjct: 257 DEVYQENIYDGEKPFI 272

Length = 481

>gnl|CDD|236248 PRK08361, PRK08361, aspartate aminotransferase; Provisional

 Score =  113 bits (283), Expect = 3e-28
 Identities = 74/258 (28%), Positives = 120/258 (46%), Gaps = 15/258 (5%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
           + VISL +G+P     F T     EA   AL  E +  Y P AG+P  R AIAEY  +  
Sbjct: 33  ENVISLGIGEPD----FDTPKNIKEAAKRAL-DEGWTHYTPNAGIPELREAIAEYYKKFY 87

Query: 95  PYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL 154
              +  ++V VT+G  +A  +A   L   G  +++P P F  Y   A     +     L 
Sbjct: 88  GVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLR 147

Query: 155 PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEV 214
            +  ++ D D++  L  + T  +VI  P NP G     +  + +A+ A      +++DE 
Sbjct: 148 EENEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEP 207

Query: 215 YGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER 274
           Y H ++      PM  +     IL   S SK + + GWRLG+ +           +V++ 
Sbjct: 208 YEHFLYEGAKHYPMIKYAPDNTILA-NSFSKTFAMTGWRLGFVIA--------PEQVIKD 258

Query: 275 MKK-YFDILGDPATFIQV 291
           M K +  I+G+ A+F+Q+
Sbjct: 259 MIKLHAYIIGNVASFVQI 276

Length = 391

>gnl|CDD|237361 PRK13355, PRK13355, bifunctional HTH-domain containing protein/aminotransferase; Provisional

 Score =  112 bits (282), Expect = 1e-27
 Identities = 62/229 (27%), Positives = 112/229 (48%), Gaps = 5/229 (2%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
           E     ++ L +G+P     F T       +A+ L   +  GY+ + GL   R+AI +Y 
Sbjct: 142 EAAGTHILKLNIGNPAPFG-FRTPDEVVYDMAQQLTDTE--GYSDSKGLFSARKAIMQYA 198

Query: 91  -SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVR 149
             + LP  +  +D++  +G ++ I+++M+ L   G  +L+P P +P++            
Sbjct: 199 QLKGLP-NVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAV 257

Query: 150 HFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLV 209
           H+       W  D+DDI S     T A+VIINP NP G +Y  + LQ++ + A + + ++
Sbjct: 258 HYRCDEQSEWYPDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLII 317

Query: 210 IADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
            +DE+Y  LV        +      +  +T   LSK  ++ G+R+GW +
Sbjct: 318 FSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMI 366

Length = 517

>gnl|CDD|181082 PRK07682, PRK07682, hypothetical protein; Validated

 Score =  109 bits (273), Expect = 6e-27
 Identities = 69/228 (30%), Positives = 109/228 (47%), Gaps = 16/228 (7%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
           + VISL +G+P     F T     EA   +L  + +  Y   AGL   R+ IA+YL +  
Sbjct: 20  EGVISLGVGEPD----FVTPWNVREASIRSL-EQGYTSYTANAGLLELRQEIAKYLKKRF 74

Query: 95  PYKLTPND-VFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE-LSAAFRHIEVRHFD 152
                PND + VT G +QA+DVAM  +  PG  +L+  P F  Y  L      + V    
Sbjct: 75  AVSYDPNDEIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPV-PVA 133

Query: 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212
              +  ++V    IE+     T A+++ +P NP G V +   L+++A    K   +V++D
Sbjct: 134 TTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSD 193

Query: 213 EVYGHLVFGDKPFVPM----GVFGSTVPILTLGSLSKRWIVPGWRLGW 256
           E+Y  L + D+ +       G+   T+ I      SK + + GWRLG+
Sbjct: 194 EIYAELTY-DEAYTSFASIKGMRERTILI---SGFSKGFAMTGWRLGF 237

Length = 378

>gnl|CDD|236095 PRK07777, PRK07777, aminotransferase; Validated

 Score =  108 bits (272), Expect = 1e-26
 Identities = 73/204 (35%), Positives = 102/204 (50%), Gaps = 10/204 (4%)

Query: 59  EAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAM 117
           EA  EA+     N Y P  G+P  R AIA    R    +  P+ +V VT G T+AI  A+
Sbjct: 44  EAAQEAIA-GGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAV 102

Query: 118 ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD-KGWEVDLDDIESLADQNTVA 176
             L  PG  +LL  P +  Y    A          L+PD +G+ +DLD + +     T A
Sbjct: 103 LGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRA 162

Query: 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM----GVFG 232
           L++ +P NP G V +   L  +AE A +   LVI DEVY HLVF     +P+    G+  
Sbjct: 163 LIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRE 222

Query: 233 STVPILTLGSLSKRWIVPGWRLGW 256
            TV   T+ S +K + V GW++GW
Sbjct: 223 RTV---TISSAAKTFNVTGWKIGW 243

Length = 387

>gnl|CDD|180537 PRK06348, PRK06348, aspartate aminotransferase; Provisional

 Score =  108 bits (271), Expect = 1e-26
 Identities = 59/250 (23%), Positives = 116/250 (46%), Gaps = 21/250 (8%)

Query: 20  MLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNG---YAPT 76
            ++++ +     K    +I L++GDP +        +  E++  A   +   G   Y  +
Sbjct: 14  EVNIMAEIATLAKKFPDIIDLSLGDPDL--------ITDESIINAAFEDAKKGHTRYTDS 65

Query: 77  AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI 136
            G       I +Y S++       N++  T G    + +A+  +  PG  +++  P F  
Sbjct: 66  GGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTP 125

Query: 137 Y----ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192
           Y    E+        +   +   + G+++++  +E+L    T A+++ +P NP G V+S 
Sbjct: 126 YKDQIEMV---GGKPI-ILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPTGAVFSK 181

Query: 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPG 251
           + L+++A+ A +    +I+DEVY    F +  FVPM    G     +T GS SK + + G
Sbjct: 182 ETLEEIAKIAIEYDLFIISDEVYDGFSFYE-DFVPMATLAGMPERTITFGSFSKDFAMTG 240

Query: 252 WRLGWFVTTD 261
           WR+G+ +  D
Sbjct: 241 WRIGYVIAPD 250

Length = 384

>gnl|CDD|181036 PRK07568, PRK07568, aspartate aminotransferase; Provisional

 Score =  108 bits (271), Expect = 2e-26
 Identities = 68/231 (29%), Positives = 115/231 (49%), Gaps = 9/231 (3%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
           +K   KV  L +G P +     T  V  EA+      E+   Y+ + G+P  R A A+Y 
Sbjct: 26  KKRGIKVYHLNIGQPDIK----TPEVFFEAIKNY--DEEVLAYSHSQGIPELREAFAKYY 79

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
            +     + P+++ +T+G ++AI  AM  +  PG  IL+P P +  Y   A    +++  
Sbjct: 80  KK-WGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVP 138

Query: 151 FDLLPDKGWEV-DLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLV 209
                ++G+ +   ++IE L    T A++I NPGNP G VY+ + L+ LAE A K    +
Sbjct: 139 VTTKIEEGFHLPSKEEIEKLITPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFL 198

Query: 210 IADEVYGHLVFGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVT 259
           I+DEVY   V+    +       G    ++ + S+SKR+   G R+G  ++
Sbjct: 199 ISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLIS 249

Length = 397

>gnl|CDD|180734 PRK06855, PRK06855, aminotransferase; Validated

 Score =  108 bits (272), Expect = 2e-26
 Identities = 81/267 (30%), Positives = 128/267 (47%), Gaps = 32/267 (11%)

Query: 59  EAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMA 118
           E VAE ++ +K  GY PT G+  TR  +AE  ++    ++TP+D+   +G   AI     
Sbjct: 55  EIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYG 114

Query: 119 LLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN- 173
           LL R  A ++ P P +  +  +    A +  +    + L P+  W  DLDD+E+    N 
Sbjct: 115 LL-RREARVIGPSPAYSTHSSAEAAHAGYPPV---TYRLDPENNWYPDLDDLENKVKYNP 170

Query: 174 -TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG-VF 231
               +++INP NP G VY  + L+++ + A +    +I DE+Y ++V+  K  VP+  V 
Sbjct: 171 SIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVI 230

Query: 232 GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQV 291
           G  VP + L  +SK    PG R GW         +   K  E  KKY + + + A  I+V
Sbjct: 231 GD-VPGIALKGISKELPWPGSRCGWIEV------YNADK-DEVFKKYINSILN-AKMIEV 281

Query: 292 CIMYGCLST------IMQIMIHGNFLE 312
           C      ST      I +IM H  +  
Sbjct: 282 C------STTLPQMAIPRIMSHPEYKN 302

Length = 433

>gnl|CDD|223157 COG0079, HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

 Score =  104 bits (262), Expect = 1e-25
 Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 24/221 (10%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA 116
             EA+  AL  +K N Y P       R A+AEY        + P +V V +G  + I++ 
Sbjct: 40  VIEAIRAAL--DKLNRY-PDPDYRELRAALAEYYG-----VVDPENVLVGNGSDELIELL 91

Query: 117 MALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176
           +     PG  +L+P P F +YE++A     EV    L   K + +DLD I +     T  
Sbjct: 92  VRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPL---KEFRLDLDAILAAIRDKTKL 148

Query: 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP 236
           + + NP NP G +   + L+ L E A     LV+ DE Y    F  +  + +  +   + 
Sbjct: 149 VFLCNPNNPTGTLLPREELRALLE-ALPEGGLVVIDEAYIE--FSPESSLELLKYPPNL- 204

Query: 237 ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK 277
            + L + SK + + G R+G+ +          P+++  + K
Sbjct: 205 -IVLRTFSKAFGLAGLRVGYAIAN--------PELIAALNK 236

Length = 356

>gnl|CDD|235985 PRK07309, PRK07309, aromatic amino acid aminotransferase; Validated

 Score =  101 bits (253), Expect = 4e-24
 Identities = 69/230 (30%), Positives = 110/230 (47%), Gaps = 25/230 (10%)

Query: 37  VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSR--DL 94
           ++ L +G+P     F T     EA   A+     + Y   AGL   R+A A+++    +L
Sbjct: 32  ILKLTLGEPD----FTTPDHVKEAAKRAI-DANQSHYTGMAGLLELRQAAADFVKEKYNL 86

Query: 95  PYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEV------ 148
            Y    N++ VT G T+A+  ++  +  PG  +LLP P +P YE        E+      
Sbjct: 87  DYAPE-NEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTT 145

Query: 149 -RHFDLLPDKGWEVDLDDIESLADQ-NTVALVIIN-PGNPCGNVYSYQHLQKLAETANKL 205
              F L P+      L+  +++ +Q + +  VI+N P NP G  YS + ++ LA+   K 
Sbjct: 146 ENDFVLTPEM-----LE--KAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKY 198

Query: 206 KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG 255
              VI+DEVY  L +  +P V +  +     IL  G LSK   + GWR+G
Sbjct: 199 DIFVISDEVYSELTYTGEPHVSIAEYLPDQTILING-LSKSHAMTGWRIG 247

Length = 391

>gnl|CDD|215089 PLN00175, PLN00175, aminotransferase family protein; Provisional

 Score =  101 bits (253), Expect = 5e-24
 Identities = 68/226 (30%), Positives = 109/226 (48%), Gaps = 15/226 (6%)

Query: 38  ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYK 97
           I+L  G P     F       EA  +A+   K N YA   G+P    AIAE   +D    
Sbjct: 57  INLGQGFPN----FDGPDFVKEAAIQAIRDGK-NQYARGFGVPELNSAIAERFKKDTGLV 111

Query: 98  LTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD 156
           + P  +V VTSGCT+AI   +  L  PG  ++L  P +  YE + +    +++   L P 
Sbjct: 112 VDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPP 171

Query: 157 KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG 216
             + V  D++++     T A++I  P NP G +++ + L+ +A    +   L   DEVY 
Sbjct: 172 D-FAVPEDELKAAFTSKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYD 230

Query: 217 HLVFGDKPFVPM----GVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
            L F +   + M    G++  TV   T+ SL K + + GW++GW +
Sbjct: 231 KLAF-EGDHISMASLPGMYERTV---TMNSLGKTFSLTGWKIGWAI 272

Length = 413

>gnl|CDD|181026 PRK07550, PRK07550, hypothetical protein; Provisional

 Score =  100 bits (252), Expect = 5e-24
 Identities = 65/240 (27%), Positives = 101/240 (42%), Gaps = 24/240 (10%)

Query: 58  TEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAM 117
             A+AEA      + Y P  GLP  R A A + SR     ++P  V +TSGC QA   AM
Sbjct: 48  LRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAM 107

Query: 118 ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL 177
             L+  G  ++LP P +  +++      I   +       G   D    E+L    T A+
Sbjct: 108 VTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITPRTRAI 167

Query: 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-----G 232
            ++ P NP G VY  + L +L + A +    +I DE Y    F      P  +F      
Sbjct: 168 ALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRD--FDSGGGAPHDLFADPDWD 225

Query: 233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVC 292
            T+  + L S SK + + G R+G  V +        P  +  ++K+ D +        +C
Sbjct: 226 DTL--VHLYSFSKSYALTGHRVGAVVAS--------PARIAEIEKFMDTV-------AIC 268

Length = 386

>gnl|CDD|236075 PRK07683, PRK07683, aminotransferase A; Validated

 Score = 99.8 bits (249), Expect = 2e-23
 Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 27/234 (11%)

Query: 33  NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSR 92
           N   +ISL +G P     F T     EA   A+  E +  Y   AGL   R+A   ++  
Sbjct: 26  NYDNLISLTIGQPD----FPTPSHVKEAAKRAIT-ENYTSYTHNAGLLELRKAACNFVKD 80

Query: 93  --DLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE-----LSAAFRH 145
             DL Y    +++ VT G ++AID+A   +  PG  ++LP P +P YE       A    
Sbjct: 81  KYDLHYS-PESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVF 139

Query: 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL 205
           I+ R        G+ +  + +E+   + T  +V+  P NP G   S + LQ +A+     
Sbjct: 140 IDTR------STGFRLTAEALENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDK 193

Query: 206 KTLVIADEVYGHLVFGDKPFVPMGVFGS----TVPILTLGSLSKRWIVPGWRLG 255
              V++DE+Y  LV+ ++P   +  F      T+ I     LSK   + GWR+G
Sbjct: 194 NIFVLSDEIYSELVY-EQPHTSIAHFPEMREKTIVI---NGLSKSHSMTGWRIG 243

Length = 387

>gnl|CDD|181595 PRK08960, PRK08960, hypothetical protein; Provisional

 Score = 99.4 bits (248), Expect = 2e-23
 Identities = 65/229 (28%), Positives = 101/229 (44%), Gaps = 22/229 (9%)

Query: 37  VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY 96
           VI L +G+P     F T      A   AL +     Y    GLP  R AIA + ++    
Sbjct: 34  VIHLEIGEPD----FTTAEPIVAAGQAALAAGHTR-YTAARGLPALREAIAGFYAQRYGV 88

Query: 97  KLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFD---- 152
            + P  + VT G + A+ +A +LL  PG + LL  PG+P        RH  +R  +    
Sbjct: 89  DVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCN------RHF-LRLVEGAAQ 141

Query: 153 ---LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLV 209
              + PD  +++    +E   + +TV  ++ +P NP G + S   L  L++        +
Sbjct: 142 LVPVGPDSRYQLTPALVERHWNADTVGALVASPANPTGTLLSRDELAALSQALRARGGHL 201

Query: 210 IADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
           + DE+Y  L +G      + V         L S SK + + GWRLGW V
Sbjct: 202 VVDEIYHGLTYGVDAASVLEVDDD---AFVLNSFSKYFGMTGWRLGWLV 247

Length = 387

>gnl|CDD|181580 PRK08912, PRK08912, hypothetical protein; Provisional

 Score = 98.9 bits (247), Expect = 3e-23
 Identities = 68/213 (31%), Positives = 105/213 (49%), Gaps = 19/213 (8%)

Query: 59  EAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAM 117
            A A+ALL +  N Y P  GLP  R+A+A + +R     L P  +V VTSG T+A+  A+
Sbjct: 46  RAAADALL-DGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAAL 104

Query: 118 ALLSRPGANILLPRPGF----PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN 173
             L  PG  ++L +P +    P+   +     + VR    L    W +    + +     
Sbjct: 105 LALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRL-VR----LEPPHWRLPRAALAAAFSPR 159

Query: 174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM----G 229
           T A+++ NP NP G V+  + L  LAE   +   + I DEV+ H+VF  +  +P+    G
Sbjct: 160 TKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPG 219

Query: 230 VFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP 262
           +   TV I   GS  K + + GW++G FV   P
Sbjct: 220 MRERTVKI---GSAGKIFSLTGWKVG-FVCAAP 248

Length = 387

>gnl|CDD|233290 TIGR01141, hisC, histidinol-phosphate aminotransferase

 Score = 92.7 bits (231), Expect = 3e-21
 Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 29/206 (14%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA 116
           A EA+      +K + Y P       ++A+A+Y      Y + P  + + +G  + I++ 
Sbjct: 37  AKEALRAEA--DKLHRY-PDPDPAELKQALADY------YGVDPEQILLGNGSDEIIELL 87

Query: 117 MALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176
           +     PG  +L+P P + +YE+SA     EV    L  D   ++DL+DI    D     
Sbjct: 88  IRAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDED--GQLDLEDILVAIDDKPKL 145

Query: 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP 236
           + + +P NP GN+ S   ++ + E   +   LV+ DE YG   F  +P        ST+P
Sbjct: 146 VFLCSPNNPTGNLLSRSDIEAVLERTPE-DALVVVDEAYGE--FSGEP--------STLP 194

Query: 237 -------ILTLGSLSKRWIVPGWRLG 255
                  ++ L +LSK + + G R+G
Sbjct: 195 LLAEYPNLIVLRTLSKAFGLAGLRIG 220

Alternate names: histidinol-phosphate transaminase; imidazole acetol-phosphate transaminase Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme [Amino acid biosynthesis, Histidine family]. Length = 346

>gnl|CDD|234249 TIGR03538, DapC_gpp, succinyldiaminopimelate transaminase

 Score = 91.7 bits (228), Expect = 9e-21
 Identities = 74/242 (30%), Positives = 111/242 (45%), Gaps = 25/242 (10%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLS--EKFNGYAPTAGLPLTRRAIAEYLSR 92
           K  I+L++G+P         H     V EAL       + Y  T GLP  R+AIA +L R
Sbjct: 28  KPPIALSIGEPK--------HPTPAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLER 79

Query: 93  --DLPYKLTPND-VFVTSGCTQAI-DVAMALLSRPG-ANILLPRPGFPIYELSAAFRHIE 147
             DLP  + P   V   +G  +A+   A A+++      +++P P + IYE +A     E
Sbjct: 80  RFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAE 139

Query: 148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207
               +   + G+  D D +     +    L + +PGNP G V S   L+KL E A++   
Sbjct: 140 PYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGF 199

Query: 208 LVIADEVYGHLVFGDKPFVPMGVFGSTVPI--------LTLGSLSKRWIVPGWRLGWFVT 259
           ++ +DE Y  L F D+   P G+  +   +        L   SLSKR  +PG R G FV 
Sbjct: 200 IIASDECYSELYF-DEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSG-FVA 257

Query: 260 TD 261
            D
Sbjct: 258 GD 259

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Length = 393

>gnl|CDD|177996 PLN02368, PLN02368, alanine transaminase

 Score = 91.8 bits (228), Expect = 9e-21
 Identities = 73/275 (26%), Positives = 128/275 (46%), Gaps = 26/275 (9%)

Query: 42  MGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN 101
           + DP V   F    +A      +L S     Y+ + GLP  R+ +AE++ R   Y   P 
Sbjct: 72  LDDPNVGLLFPADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPE 131

Query: 102 DVFVTSGCTQAI-DVAMALLSRPGANILLPRPGFPIYELSAA-FRHIEVRHFDLLPDKGW 159
            +F+T G ++ +  +  A++      +L+P P +P+Y  + +      V ++ L   + W
Sbjct: 132 LIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATISLLGGTLVPYY-LEESENW 190

Query: 160 EVDLDDIESLADQN-----TV-ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
            +D++++     Q      TV A+VIINPGNP G   S  +L+++ +   + + +++ DE
Sbjct: 191 GLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDE 250

Query: 214 VYGHLVFGD-KPFVP-------MGV-FGSTVPILTLGSLSK-RWIVPGWRLGWFVTTDPC 263
           VY   ++ D +PF+        MG      V +++  ++SK  W   G R G+F  T+  
Sbjct: 251 VYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTN-- 308

Query: 264 GMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCL 298
                PK VE + K   I   P    Q  I  G +
Sbjct: 309 ---IPPKTVEEIYKVASIALSPNVSGQ--IFMGLM 338

Length = 407

>gnl|CDD|235654 PRK05957, PRK05957, aspartate aminotransferase; Provisional

 Score = 88.6 bits (220), Expect = 1e-19
 Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 10/208 (4%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPND-VFVTSGCTQAIDV 115
           A EA+   L + + + Y    G+P    AI + L +D   +L     + VT+G   A   
Sbjct: 45  AIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMN 104

Query: 116 AMALLSRPGANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ 172
           A+  ++ PG  I+L  P +  +E++   A  + I V       D  +++  + IE     
Sbjct: 105 AILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVP-----TDDNYQLQPEAIEQAITP 159

Query: 173 NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP-FVPMGVF 231
            T A+V I+P NP G VY    L+ + +   +     I+DE Y +  +     F P  + 
Sbjct: 160 KTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIP 219

Query: 232 GSTVPILTLGSLSKRWIVPGWRLGWFVT 259
           GS    ++L SLSK +    WR+G+ V 
Sbjct: 220 GSGNHTISLYSLSKAYGFASWRIGYMVI 247

Length = 389

>gnl|CDD|180720 PRK06836, PRK06836, aspartate aminotransferase; Provisional

 Score = 87.6 bits (218), Expect = 3e-19
 Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 33/221 (14%)

Query: 57  ATEAVAEALL------SEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT 110
              AV EAL           +GY P AG P  R AIAE L+R     LT + + +T G  
Sbjct: 47  PPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAA 106

Query: 111 QAIDVAMALLSRPGANILLPRPGFPIYEL---SAAFRHIEV----RHFDLLPDKGWEVDL 163
            A++VA+  +  PG  +++  P F  Y     +   + + V      F          DL
Sbjct: 107 GALNVALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQP--------DL 158

Query: 164 DDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT------LVIADEVYGH 217
           D +E+     T A++I +P NP G VYS + L+ LA    +          +I+DE Y  
Sbjct: 159 DALEAAITPKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYRE 218

Query: 218 LVFGDK--PFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW 256
           +V+     P++    + +++ +    S SK   +PG R+G+
Sbjct: 219 IVYDGAEVPYIF-KYYDNSIVV---YSFSKSLSLPGERIGY 255

Length = 394

>gnl|CDD|184830 PRK14809, PRK14809, histidinol-phosphate aminotransferase; Provisional

 Score = 87.1 bits (216), Expect = 3e-19
 Identities = 62/214 (28%), Positives = 105/214 (49%), Gaps = 32/214 (14%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID-V 115
           A EA+ EA  +E+ + Y   +   LT   +A+         ++P  V++ +G   A+D +
Sbjct: 48  AVEAIREA--AERVHSYPKASHADLTAA-LADRWD------VSPEQVWLANGGDGALDYL 98

Query: 116 AMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDI-ESLADQNT 174
           A A+L  PG  +L+P PGF  Y +SA + H EVR + +     +E   D + ++   +  
Sbjct: 99  ARAMLD-PGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYDGERI 157

Query: 175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST 234
           V L   +P NP G+      ++ LAE  ++ +TLV+ DE YG   F ++P        S 
Sbjct: 158 VYLT--SPHNPTGSEIPLDEVEALAERTDE-ETLVVVDEAYGE--FAERP--------SA 204

Query: 235 VPIL-------TLGSLSKRWIVPGWRLGWFVTTD 261
           V ++        L + SK + + G RLG+ V  +
Sbjct: 205 VALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPE 238

Length = 357

>gnl|CDD|234250 TIGR03540, DapC_direct, LL-diaminopimelate aminotransferase

 Score = 87.1 bits (216), Expect = 4e-19
 Identities = 71/246 (28%), Positives = 111/246 (45%), Gaps = 19/246 (7%)

Query: 24  LMQSVDDEKNEKK-----VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAG 78
           L   +D +K EKK     VISL +GDP + +  H      EA+ +A  + + + Y    G
Sbjct: 13  LFAEIDKKKAEKKAEGVDVISLGIGDPDLPTPKHIV----EALCKAAENPENHRYPSYEG 68

Query: 79  LPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIY 137
           +   R+A+A++  R    +L P  +V    G  + I         PG  +L+P PG+P+Y
Sbjct: 69  MLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVY 128

Query: 138 ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA---LVIIN-PGNPCGNVYSYQ 193
            +   F   E     L  + G+  D D I     ++      L+ IN P NP G V   +
Sbjct: 129 RIGTLFAGGEPYEMPLKEENGFLPDFDAI----PEDIAKKAKLMFINYPNNPTGAVAPLK 184

Query: 194 HLQKLAETANKLKTLVIADEVYGHLVF-GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW 252
             ++L E A +   +V  D  Y  + F G K    + V G+    +   SLSK + + GW
Sbjct: 185 FFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGW 244

Query: 253 RLGWFV 258
           R+G  V
Sbjct: 245 RIGMAV 250

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia and the clade containing the Chlamydia gene is a neighboring one in the same pfam00155 superfamily so it seems quite reasonable that these enzymes catalyze the same transformation. Length = 383

>gnl|CDD|224090 COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

 Score = 85.4 bits (212), Expect = 1e-18
 Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 15/213 (7%)

Query: 58  TEAVAEALLSEKFNGYA-PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA 116
            EA+ E +    F GY   +  L     AIA +  +   +++ P  +    G    I +A
Sbjct: 44  IEALRERVDHGVF-GYPYGSDELY---AAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLA 99

Query: 117 MALLSRPGANILLPRPGFPIYELSAAFRHIEVRHF----DLLPDKGWEVDLDDIE-SLAD 171
           +  L++PG  +++  P   +Y        +  R       +  D  +E+D D +E +  D
Sbjct: 100 IRALTKPGDGVVIQTP---VYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVD 156

Query: 172 QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF 231
           +     ++ NP NP G V++ + L+K+AE   +    VI+DE++  LV G    +P    
Sbjct: 157 ERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASL 216

Query: 232 GSTVP--ILTLGSLSKRWIVPGWRLGWFVTTDP 262
                   +TL S SK + + G +  + + ++ 
Sbjct: 217 SERFADNSITLTSASKTFNLAGLKCAYIIISNR 249

Length = 388

>gnl|CDD|188462 TIGR03947, viomycin_VioD, capreomycidine synthase

 Score = 84.1 bits (208), Expect = 3e-18
 Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 13/187 (6%)

Query: 75  PTAGLPLTRRAIAEYLSRDLPYKLTPND---VFVTSGCTQAIDVAMALLSRPGANILLPR 131
           P+ G    R AIA+        +    D   V  T G ++AI + +  L RPG  +++  
Sbjct: 49  PSLGGEGLRAAIAD--------RWRGGDAHVVMTTHGSSEAIYLVLTALLRPGDEVVVVD 100

Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191
           P +      A     EVR + LL  +G+  DLD + +L    T A+V+  P NP G   +
Sbjct: 101 PAYHSLSHLAVATGCEVRPWPLLAVRGFRPDLDALRALLTPRTRAVVVNFPHNPTGASVT 160

Query: 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG 251
            + L +L E A +   +++ D  +  LV    P          V  ++ G+LSK + +PG
Sbjct: 161 PRELDELLERAARSGAVLLWDNAFADLVHDAPPLPDPSALYDRV--ISFGTLSKAFGLPG 218

Query: 252 WRLGWFV 258
            R+GW V
Sbjct: 219 LRVGWCV 225

Members of this family are the enzyme capreomycidine synthase, which performs the second of two steps in the biosynthesis of 2S,3R-capreomycidine from arginine. Capreomycidine is an unusual amino acid used by non-ribosomal peptide synthases (NRPS) to make the tuberactinomycin class of peptide antibiotic. The best characterized member is VioD from the biosynthetic pathway for viomycin [Cellular processes, Biosynthesis of natural products]. Length = 359

>gnl|CDD|235989 PRK07324, PRK07324, transaminase; Validated

 Score = 83.1 bits (206), Expect = 9e-18
 Identities = 69/260 (26%), Positives = 105/260 (40%), Gaps = 67/260 (25%)

Query: 46  TVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV 105
           T+           EA  + L  +K   Y    G P  + A+A      L   + P ++  
Sbjct: 32  TLEELLALAGKNPEAFYQELGQKKLT-YGWIEGSPEFKEAVAS-----LYQNVKPENILQ 85

Query: 106 TSGCTQAIDVAMALLSRPGANIL----LPRPG------FPIYE--------LSAAFRHIE 147
           T+G T             GAN L    L  PG      +P Y+        L A     E
Sbjct: 86  TNGAT-------------GANFLVLYALVEPGDHVISVYPTYQQLYDIPESLGA-----E 127

Query: 148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207
           V ++ L  + GW  DLD++  L   NT  + I N  NP G +    +L+++ E A  +  
Sbjct: 128 VDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDRAYLEEIVEIARSVDA 187

Query: 208 LVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL-------GSLSKRWIVPGWRLGWFVTT 260
            V++DEVY  L   D+        GST  I  L        S+SK + +PG R+GW    
Sbjct: 188 YVLSDEVYRPL---DED-------GSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAAN 237

Query: 261 DPCGMFRKPKVVERMKKYFD 280
           +        +V++ ++KY D
Sbjct: 238 E--------EVIDILRKYRD 249

Length = 373

>gnl|CDD|180403 PRK06107, PRK06107, aspartate aminotransferase; Provisional

 Score = 82.1 bits (203), Expect = 2e-17
 Identities = 63/237 (26%), Positives = 98/237 (41%), Gaps = 32/237 (13%)

Query: 35  KKVISLAMGDPTVHSCFHT-THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
           + ++ L +G+P     F T  H+   AVA     E    Y    G P  R+AI   L R 
Sbjct: 33  RSIVDLTVGEPD----FDTPDHIKQAAVAAIERGE--TKYTLVNGTPALRKAIIAKLERR 86

Query: 94  LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP---GFPIYELSAAFRHIEVR- 149
                  N++ V  G  QAI +A+      G  +++P P    +P   L+     + V  
Sbjct: 87  NGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVAC 146

Query: 150 ----HFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET-ANK 204
                F L P+         +E+     T  L++  P NP G VYS   L+ LA+     
Sbjct: 147 PEEQGFKLTPEA--------LEAAITPRTRWLILNAPSNPTGAVYSRAELRALADVLLRH 198

Query: 205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-----ILTLGSLSKRWIVPGWRLGW 256
              LV+ D++Y H+ F D    P     +  P     +L    +SK + + GWR+G+
Sbjct: 199 PHVLVLTDDIYDHIRFDD---EPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGY 252

Length = 402

>gnl|CDD|180937 PRK07337, PRK07337, aminotransferase; Validated

 Score = 81.6 bits (202), Expect = 3e-17
 Identities = 63/235 (26%), Positives = 103/235 (43%), Gaps = 22/235 (9%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
           E+  + +I + +G+P     F       EA A   L      Y    GL   R AIA + 
Sbjct: 26  ERAGRDIIHMGIGEPD----FTAPEPVVEA-AARALRRGVTQYTSALGLAPLREAIAAWY 80

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
           +R     + P  + VT+G + A+ +A   L   G  +L+P P +P        RH  V  
Sbjct: 81  ARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYP------CNRHF-VAA 133

Query: 151 FD----LLP---DKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETAN 203
            +    L+P    + +++   D+E+   + T  +++ +P NP G   +   L+++ E   
Sbjct: 134 AEGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPSNPTGTSIAPDELRRIVEAVR 193

Query: 204 KLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
                 I DE+Y  L +   P V     G  V  +T+ S SK + + GWRLGW V
Sbjct: 194 ARGGFTIVDEIYQGLSYDAAP-VSALSLGDDV--ITINSFSKYFNMTGWRLGWLV 245

Length = 388

>gnl|CDD|132578 TIGR03539, DapC_actino, succinyldiaminopimelate transaminase

 Score = 80.5 bits (199), Expect = 5e-17
 Identities = 66/232 (28%), Positives = 95/232 (40%), Gaps = 27/232 (11%)

Query: 37  VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY 96
           ++ L++G P          +   A+A A  +    GY  T G P  R AI ++L R    
Sbjct: 23  IVDLSVGTPVDP----VPPLIRAALAAAADAP---GYPQTWGTPELREAIVDWLERRRGV 75

Query: 97  K-LTPNDVFVTSGCTQAIDVAMALLS-RPGANILLPRPGFPIYELSAAFRHIEVRHFDLL 154
             L P  V    G  + +     LL   PG  +++P   +P YE+ A             
Sbjct: 76  PGLDPTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATP------ 129

Query: 155 PDKGWEVDLDDIESLADQNTVALVIIN-PGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
                 V  DD   L D     L+ +N PGNP G V S   L+ +   A +   +V +DE
Sbjct: 130 ------VAADDPTEL-DPVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDE 182

Query: 214 VYGHLVFGDKPFV---PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP 262
            Y  L +  +P     P    G    +L + SLSKR  + G+R G FV  DP
Sbjct: 183 CYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAG-FVAGDP 233

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Length = 357

>gnl|CDD|181268 PRK08175, PRK08175, aminotransferase; Validated

 Score = 80.5 bits (199), Expect = 8e-17
 Identities = 62/260 (23%), Positives = 107/260 (41%), Gaps = 19/260 (7%)

Query: 37  VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY 96
           +I  +MG+P   +  H      E + E       +GY+ + G+P  RRAI+ +       
Sbjct: 31  IIDFSMGNPDGPTPPHIV----EKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDV 86

Query: 97  KLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP 155
            + P  +  VT G  + +   M      G  +L+P P +PI+   A     +VR   L+ 
Sbjct: 87  DIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVE 146

Query: 156 DKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVY 215
              +  +L+     +      +++  P NP       +  +K+   A +   LV+ D  Y
Sbjct: 147 GVDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAY 206

Query: 216 GHLVFGDKPFVP--MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273
             +V+ D    P  M V G+    +   +LSK + + GWR+G+       G       + 
Sbjct: 207 ADIVY-DGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFM-----VGNPELVSALA 260

Query: 274 RMKKYFDILGDPATF--IQV 291
           R+K Y D      TF  +QV
Sbjct: 261 RIKSYHDY----GTFTPLQV 276

Length = 395

>gnl|CDD|181642 PRK09082, PRK09082, methionine aminotransferase; Validated

 Score = 80.0 bits (198), Expect = 9e-17
 Identities = 54/189 (28%), Positives = 85/189 (44%), Gaps = 9/189 (4%)

Query: 34  EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
           E   I+L+ G P     F       EA+A A+ +   N Y P  G+   R AIA   +R 
Sbjct: 29  EHGAINLSQGFPD----FDGPPYLVEALAYAM-AAGHNQYPPMTGVAALREAIAAKTARL 83

Query: 94  LPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFD 152
              +   + ++ VT+G T+A+  A+  L RPG  +++  P +  Y  +            
Sbjct: 84  YGRQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVA 143

Query: 153 LLPDKGWEVDLDDIESLADQNTVALVIIN-PGNPCGNVYSYQHLQKLAETANKLKTLVIA 211
           L P   + VD     +     T  L+I+N P NP G V+S   ++ L +        V++
Sbjct: 144 LQPP-DFRVDWQRFAAAISPRT-RLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLS 201

Query: 212 DEVYGHLVF 220
           DEVY H+VF
Sbjct: 202 DEVYEHIVF 210

Length = 386

>gnl|CDD|181749 PRK09276, PRK09276, LL-diaminopimelate aminotransferase; Provisional

 Score = 79.2 bits (196), Expect = 2e-16
 Identities = 69/243 (28%), Positives = 117/243 (48%), Gaps = 21/243 (8%)

Query: 28  VDDEKNEKK-----VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT 82
           +D +K EK      VISL +GDP +     T     EA+ +A+   + + Y    G+   
Sbjct: 19  IDKKKAEKIARGVDVISLGIGDPDLP----TPDHIIEAMCKAVEDPENHQYPSYEGMLEF 74

Query: 83  RRAIAEYLSRDLPYKLTPNDVFVTS-GCTQAI-DVAMALLSRPGANILLPRPGFPIYELS 140
           R+A+A++  R    +L P    ++  G  + I  + +A ++ PG  +L+P PG+P+Y++ 
Sbjct: 75  RKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVN-PGDVVLVPDPGYPVYKIG 133

Query: 141 AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA---LVIIN-PGNPCGNVYSYQHLQ 196
             F   E     L  + G+  DLD I     ++      L+ IN P NP G V   +  +
Sbjct: 134 TIFAGGEPYFMPLKEENGFLPDLDAI----PEDVAKKAKLMFINYPNNPTGAVADLEFFE 189

Query: 197 KLAETANKLKTLVIADEVYGHLVF-GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG 255
           ++ + A K   +V  D  Y  + + G KP   + V G+    +   SLSK + + GWR+G
Sbjct: 190 EVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIG 249

Query: 256 WFV 258
           + V
Sbjct: 250 FAV 252

Length = 385

>gnl|CDD|236393 PRK09147, PRK09147, succinyldiaminopimelate transaminase; Provisional

 Score = 79.1 bits (196), Expect = 2e-16
 Identities = 74/246 (30%), Positives = 109/246 (44%), Gaps = 31/246 (12%)

Query: 34  EKKVISLAMGDPTVHSCFHTT-HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSR 92
           +   ISL++G+P      H T     +A+A  L  +    Y  TAGLP  R AIA +L R
Sbjct: 28  DLPPISLSIGEPK-----HPTPAFIKDALAANL--DGLASYPTTAGLPALREAIAAWLER 80

Query: 93  --DLPYKLTP-NDVFVTSGCTQAI-DVAMALL--SRPGANILLPRPGFPIYELSAAFRHI 146
              LP  L P   V   +G  +A+   A  ++    PG  ++ P P + IYE +A     
Sbjct: 81  RYGLP-ALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGA 139

Query: 147 EVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLK 206
           E    +  P   +  D D + +     T  L + +PGNP G V      +KL   +++  
Sbjct: 140 EPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYG 199

Query: 207 TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLG-----------SLSKRWIVPGWRLG 255
            ++ +DE Y  + F D+   P+G+  +      LG           SLSKR  VPG R G
Sbjct: 200 FVIASDECYSEIYF-DEAAPPLGLLEAAA---ELGRDDFKRLVVFHSLSKRSNVPGLRSG 255

Query: 256 WFVTTD 261
            FV  D
Sbjct: 256 -FVAGD 260

Length = 396

>gnl|CDD|235749 PRK06225, PRK06225, aspartate aminotransferase; Provisional

 Score = 77.9 bits (192), Expect = 5e-16
 Identities = 54/238 (22%), Positives = 99/238 (41%), Gaps = 21/238 (8%)

Query: 42  MGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN 101
           MG  T H          EA+   +   ++  Y P  G P  R  I + L       L  +
Sbjct: 33  MGQNTNH--LGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLG------LDDD 84

Query: 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL-PDKGWE 160
           +  +T+G T+++ + M     PG N + P PG+ I +  A+    EV    +   +  ++
Sbjct: 85  EALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYK 144

Query: 161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF 220
           +  + ++   D+NT  + +I+P NP G+ Y+ + +++ AE A      ++ D  Y     
Sbjct: 145 LTPELVKENMDENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAR 204

Query: 221 GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY 278
                       +    +T  S SK + + G R+G  V T        P ++E +K  
Sbjct: 205 EHTLAAEYAPEHT----VTSYSFSKIFGMAGLRIGAVVAT--------PDLIEVVKSI 250

Length = 380

>gnl|CDD|177876 PLN02231, PLN02231, alanine transaminase

 Score = 78.1 bits (192), Expect = 8e-16
 Identities = 56/188 (29%), Positives = 94/188 (50%), Gaps = 15/188 (7%)

Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN-ILLPR 131
           Y+ + G+   R AIA  +     +   PND+F+T G + A+ + M LL R   + IL P 
Sbjct: 164 YSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPI 223

Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIE-SLADQNTV-----ALVIINPGNP 185
           P +P+Y  S A     +  + L    GW +++ +++  L D  +      ALV+INPGNP
Sbjct: 224 PQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNP 283

Query: 186 CGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF-GDKPF-------VPMGVFGSTVPI 237
            G V + ++ + + E   +   +++ADEVY   V+  DK F         MG     + +
Sbjct: 284 TGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISL 343

Query: 238 LTLGSLSK 245
           ++  S+SK
Sbjct: 344 VSFQSVSK 351

Length = 534

>gnl|CDD|236119 PRK07865, PRK07865, N-succinyldiaminopimelate aminotransferase; Reviewed

 Score = 75.3 bits (186), Expect = 3e-15
 Identities = 61/201 (30%), Positives = 85/201 (42%), Gaps = 28/201 (13%)

Query: 72  GYAPTAGLPLTRRAIAEYLSRDLPY-KLTPNDVFVTSGCTQAIDVAMALLSR-----PGA 125
           GY  TAG P  R AI  +L+R      L P  V    G  + +    A L       PG 
Sbjct: 57  GYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELV----AWLPTLLGLGPGD 112

Query: 126 NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN-PGN 184
            +++P   +P YE+ A      V            V  D +  L  Q   AL+ +N P N
Sbjct: 113 VVVIPELAYPTYEVGARLAGATV------------VRADSLTELGPQR-PALIWLNSPSN 159

Query: 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV---PMGVFGSTVPILTLG 241
           P G V    HL+K+   A +   +V +DE Y  L +  +P     P    G    +L + 
Sbjct: 160 PTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVH 219

Query: 242 SLSKRWIVPGWRLGWFVTTDP 262
           SLSK+  + G+R G FV  DP
Sbjct: 220 SLSKQSNLAGYRAG-FVAGDP 239

Length = 364

>gnl|CDD|183514 PRK12414, PRK12414, putative aminotransferase; Provisional

 Score = 75.2 bits (185), Expect = 4e-15
 Identities = 72/303 (23%), Positives = 130/303 (42%), Gaps = 46/303 (15%)

Query: 13  SIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNG 72
           +I T+ G L+           +   ++L+ G P     F       E VA A+  +  N 
Sbjct: 17  TIFTVIGQLA----------AQHDALNLSQGAPN----FAPDPALVEGVARAM-RDGHNQ 61

Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPR 131
           YAP AG+   R A+AE   R    +  P  +V V +  ++ +  A++ L  PG  ++   
Sbjct: 62  YAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAISALVHPGDEVIYFE 121

Query: 132 PGF----PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG 187
           P F    PI  L  A   + ++    L  + + V+ D++ +     T  +++  P NP  
Sbjct: 122 PSFDSYAPIVRLQGA-TPVAIK----LSPEDFRVNWDEVAAAITPRTRMIIVNTPHNPSA 176

Query: 188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT-----LGS 242
            V+S   L +LA+       ++++DEVY H+VF       M    +    L      + S
Sbjct: 177 TVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSM----ARHRELAERSVIVSS 232

Query: 243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER---------MKKYF-DILGDPATFIQVC 292
             K + V GWR+G+ +   P  +  + + V +         M+  F + L +PA+++ + 
Sbjct: 233 FGKSYHVTGWRVGYCLA--PAELMDEIRKVHQFMVFSADTPMQHAFAEALAEPASYLGLG 290

Query: 293 IMY 295
             Y
Sbjct: 291 AFY 293

Length = 384

>gnl|CDD|181674 PRK09148, PRK09148, aminotransferase; Validated

 Score = 75.1 bits (185), Expect = 6e-15
 Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 33/257 (12%)

Query: 37  VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY 96
           +I L MG+P + +  H      + + E     + + Y+ + G+P  RRA A Y +R    
Sbjct: 32  IIDLGMGNPDLPTPQHIV----DKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGV 87

Query: 97  KLTPN-DVFVTSGCTQAI-DVAMALLSRPGANILLPRPGFPIYELSAAFRHI----EVRH 150
           KL P+  V  T G  +   ++A A+ + PG  IL P P +PI+    AF  I     +R 
Sbjct: 88  KLNPDTQVVATLGSKEGFANMAQAITA-PGDVILCPNPSYPIH----AFGFIMAGGVIRS 142

Query: 151 FDLLPDKGWEVDLDDIESLADQNTV----ALVIINPGNPCGNVYSYQHLQKLAETANKLK 206
               PD+ +      +E  A ++++    AL++  P NP   V      + +   A K  
Sbjct: 143 VPAEPDEEF---FPALER-AVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHD 198

Query: 207 TLVIADEVYGHLVFGDKPFVP---MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPC 263
            ++++D  Y  + F   P  P   + V G+    +   S+SK + + GWR+G+ V     
Sbjct: 199 IIILSDLAYSEIYFDGNP--PPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAV----- 251

Query: 264 GMFRKPKVVERMKKYFD 280
           G  R    + R+K Y D
Sbjct: 252 GNERLIAALTRVKSYLD 268

Length = 405

>gnl|CDD|213963 TIGR04350, C_S_lyase_PatB, putative C-S lyase

 Score = 73.1 bits (180), Expect = 2e-14
 Identities = 43/182 (23%), Positives = 89/182 (48%), Gaps = 5/182 (2%)

Query: 85  AIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFR 144
           A+  +L++   +++ P  +    G   ++  A+  L+ PG  +++  P +P + LSA   
Sbjct: 68  AVINWLAQRHGWQIDPEWIVFLPGVVPSLFAAVRALTAPGEGVIVQTPVYPPF-LSAVKS 126

Query: 145 -HIEVRHFDLLPDKG-WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202
              E+    L  D G +  DL+D+E    +    L++ +P NP G V++ + L +LAE  
Sbjct: 127 NGRELVLNPLKLDPGRYRFDLEDLEDAITEKARLLLLCSPHNPVGRVWTREELTRLAELC 186

Query: 203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLGWFVTT 260
            +   +V++DE++  LV+     +P+      +    +TL S  K + + G  + + +  
Sbjct: 187 LRHNVVVVSDEIHADLVYPPNKHIPLASLSPEIAERTVTLLSPGKTFNIAGLNISFAIIP 246

Query: 261 DP 262
           +P
Sbjct: 247 NP 248

Members of this subfamily are probable C-S lyases from a family of pyridoxal phosphate-dependent enzymes that tend to be (mis)annotated as probable aminotransferases. One member is PatB of Bacillus subtilis, a proven C-S-lyase. Another is the virulence factor cystalysin from Treponema denticola, whose hemolysin activity may stem from H2S production. Members of the seed alignment occur next to examples of the enzyme 5-histidylcysteine sulfoxide synthase, from ovothiol A biosynthesis, and would be expected to perform a C-S cleavage of 5-histidylcysteine sulfoxide to leave 1-methyl-4-mercaptohistidine (ovothiol A). Length = 384

>gnl|CDD|163316 TIGR03542, DAPAT_plant, LL-diaminopimelate aminotransferase

 Score = 73.2 bits (180), Expect = 2e-14
 Identities = 63/238 (26%), Positives = 98/238 (41%), Gaps = 23/238 (9%)

Query: 34  EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
              +I L +GD T             AV E    E F GY P  G P  R AIAE    D
Sbjct: 32  SADIIRLGIGDTTQPLPASVIEAFHNAVDELASPETFRGYGPEQGYPFLREAIAE---ND 88

Query: 94  LPYKLTPNDVFVTSGCTQAIDVAMAL-LSRPGANILLPRPGFPIYELSAAFRHIEVRHFD 152
              ++ P ++F++ G     DV     L  P   + +  P +P Y  S     +  R   
Sbjct: 89  YRGRIDPEEIFISDG--AKCDVFRLQSLFGPDNTVAVQDPVYPAYLDSN---VMAGRAGV 143

Query: 153 LLPDKGWE--------VDLDDIESLADQNTVALV-IINPGNPCGNVYSYQHLQKLAETAN 203
           L  D  +          + + I  L ++  + ++ + +P NP G V + + L++L + AN
Sbjct: 144 LDDDGRYSKITYLPCTAENNFIPELPEEPHIDIIYLCSPNNPTGTVLTKEQLKELVDYAN 203

Query: 204 KLKTLVIADEVYGHLVFGDKPFVPMGVF---GSTVPILTLGSLSKRWIVPGWRLGWFV 258
           +  +L++ D  Y    F   P +P  +F   G+    +   S SK     G RLGW V
Sbjct: 204 EHGSLILFDAAYS--AFISDPSLPHSIFEIPGARFCAIEFRSFSKTAGFTGVRLGWTV 259

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Length = 402

>gnl|CDD|233289 TIGR01140, L_thr_O3P_dcar, L-threonine-O-3-phosphate decarboxylase

 Score = 72.2 bits (178), Expect = 3e-14
 Identities = 52/196 (26%), Positives = 74/196 (37%), Gaps = 38/196 (19%)

Query: 75  PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGF 134
           P       R A A Y      Y L    V   +G  +AI   +  L  PG  +L+  P +
Sbjct: 45  PDPEYDELRAAAAAY------YGLPAASVLPVNGAQEAI-YLLPRLLAPGR-VLVLAPTY 96

Query: 135 PIYELSAAFRHIEVRHFDLLPDKGWEV----DLDDIESLADQNTVALVIINPGNPCGNVY 190
             Y    A+R             G EV    DLD + +  ++  + LV+ NP NP G + 
Sbjct: 97  SEYA--RAWR----AA-------GHEVVELPDLDRLPAALEEADL-LVVCNPNNPTGRLI 142

Query: 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP----ILTLGSLSKR 246
             + L  LA         ++ DE      F D  F P             ++ L SL+K 
Sbjct: 143 PPETLLALAARLRARGGWLVVDE-----AFID--FTPDASLAPQAARFPGLVVLRSLTKF 195

Query: 247 WIVPGWRLGWFVTTDP 262
           + + G RLG FV   P
Sbjct: 196 FGLAGLRLG-FVVAHP 210

This family contains pyridoxal phosphate-binding class II aminotransferases (see pfam00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]. Length = 330

>gnl|CDD|163313 TIGR03537, DapC, succinyldiaminopimelate transaminase

 Score = 72.2 bits (177), Expect = 4e-14
 Identities = 51/194 (26%), Positives = 82/194 (42%), Gaps = 7/194 (3%)

Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAI---DVAMALLSRPGANIL 128
           Y    G    R AI+ +  R    KL P+  V  ++G  +AI    +           ++
Sbjct: 32  YPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFIDPEEDRRRVI 91

Query: 129 LPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGN 188
              PG+P+YE  A F   E     L  + G+ + L+ +E    + T  + I  P NP G 
Sbjct: 92  FGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGA 151

Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI 248
                +L++      +   ++ +DE Y  + FG+ P   + V      +L   SLSKR  
Sbjct: 152 TAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEV--GIENVLAFHSLSKRSG 209

Query: 249 VPGWRLGWFVTTDP 262
           + G+R G FV  D 
Sbjct: 210 MTGYRSG-FVAGDE 222

The four sequences which make up the seed for this model are not closely related, although they are all members of the pfam00155 family of aminotransferases and are more closely related to each other than to anything else. Additionally, all of them are found in the vicinity of genes involved in the biosynthesis of lysine via the diaminopimelate pathway (GenProp0125), although this amount to a separation of 12 genes in the case of Sulfurihydrogenibium azorense Az-Fu1. None of these genomes contain another strong candidate for this role in the pathway. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade. Length = 350

>gnl|CDD|180281 PRK05839, PRK05839, hypothetical protein; Provisional

 Score = 68.9 bits (169), Expect = 5e-13
 Identities = 62/240 (25%), Positives = 96/240 (40%), Gaps = 23/240 (9%)

Query: 32  KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLS 91
             E K + L +G+P     F T     +A+     +   N Y  +AG    R A   +  
Sbjct: 21  NKEYKGLDLTIGEPQ----FETPKFIQDALKNN--AHLLNKYPKSAGEESLREAQRGFFK 74

Query: 92  RDLPYKLTPNDVFVTSGCTQAID--VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVR 149
           R    +L  N++  T G  + +       L  +    I  P P + IYE +A     +V 
Sbjct: 75  RRFKIELKENELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVL 134

Query: 150 HFDLLPDKGWEVDLDDIE-SLADQNTVALVIIN-PGNPCGNVYSYQHLQKLAETANKLKT 207
              L  +  +   L++ E    D     LVI+N P NP G   S + L +  + A K   
Sbjct: 135 LMPLTKENDFTPSLNEKELQEVD-----LVILNSPNNPTGRTLSLEELIEWVKLALKHDF 189

Query: 208 LVIADEVYGHLVFGDKP------FVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261
           ++I DE Y  +     P       + +G   S   +L + S+SKR   PG R G F+  D
Sbjct: 190 ILINDECYSEIYENTPPPSLLEASILVGN-ESFKNVLVINSISKRSSAPGLRSG-FIAGD 247

Length = 374

>gnl|CDD|181219 PRK08068, PRK08068, transaminase; Reviewed

 Score = 68.4 bits (168), Expect = 7e-13
 Identities = 65/228 (28%), Positives = 106/228 (46%), Gaps = 14/228 (6%)

Query: 37  VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY 96
           VI+L  G+P   +  H      EA+ EA  +   + Y+P  G P  + A A++  R+   
Sbjct: 34  VINLGQGNPDQPTPEHIV----EALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGV 89

Query: 97  KLTPN-DVFVTSGC-TQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL 154
            L P  +V +  G     +++   L++ PG  IL+P PG+P Y    A    +     L+
Sbjct: 90  TLDPETEVAILFGGKAGLVELPQCLMN-PGDTILVPDPGYPDYLSGVALARAQFETMPLI 148

Query: 155 PDKGWEVDLDDI-ESLADQNTVALVIIN-PGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212
            +  +  D   I E +A++    L+ +N P NP G V +    ++    A K    V+ D
Sbjct: 149 AENNFLPDYTKIPEEVAEK--AKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHD 206

Query: 213 EVYGHLVF-GDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFV 258
             YG + F G KP   +   G+  V I  L +LSK + + GWR+ + V
Sbjct: 207 FAYGAIGFDGQKPVSFLQTPGAKDVGI-ELYTLSKTFNMAGWRVAFAV 253

Length = 389

>gnl|CDD|181081 PRK07681, PRK07681, aspartate aminotransferase; Provisional

 Score = 63.7 bits (155), Expect = 3e-11
 Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 9/203 (4%)

Query: 59  EAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQA-IDVA 116
           E +      ++  GY  + G+     A+ EY +      L  + +V +  G     + + 
Sbjct: 52  EEMVHTANQKESYGYTLS-GIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLP 110

Query: 117 MALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDI-ESLADQNTV 175
           M   + PG  IL+P PG+  YE           +  L  +  +  DL+ I E +AD+   
Sbjct: 111 MVYAN-PGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIADK--A 167

Query: 176 ALVIIN-PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF-GDKPFVPMGVFGS 233
            ++I+N PGNP   +      +++   A K   +V+ D  Y    F G+KP   + V G+
Sbjct: 168 KMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGA 227

Query: 234 TVPILTLGSLSKRWIVPGWRLGW 256
               + + SLSK + + G R+G+
Sbjct: 228 KEVGVEINSLSKSYSLAGSRIGY 250

Length = 399

>gnl|CDD|235772 PRK06290, PRK06290, aspartate aminotransferase; Provisional

 Score = 63.9 bits (156), Expect = 3e-11
 Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 7/208 (3%)

Query: 57  ATEAVAEALLSE----KFNGYAPTAGLPLTRRAIAEYLSRDLPYK-LTPNDVFVTS-GCT 110
           A E+V E L  E    +  GYA   G+   + A A Y+ +    K + P    + S G  
Sbjct: 58  ADESVVEVLCEEAKKPENRGYADN-GIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSK 116

Query: 111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170
            A+ +  +    PG   L+  PG+P+      +   EV +  LL +  +  DLD I    
Sbjct: 117 PALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDI 176

Query: 171 DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV 230
            +    L +  P NP G V + +  +++ + A +   +V+ D  Y  L F  KP   + V
Sbjct: 177 KEKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSV 236

Query: 231 FGSTVPILTLGSLSKRWIVPGWRLGWFV 258
            G+    + + SLSK + + GWRL + V
Sbjct: 237 PGAKEVGVEIHSLSKAYNMTGWRLAFVV 264

Length = 410

>gnl|CDD|180317 PRK05942, PRK05942, aspartate aminotransferase; Provisional

 Score = 63.6 bits (155), Expect = 3e-11
 Identities = 58/226 (25%), Positives = 102/226 (45%), Gaps = 10/226 (4%)

Query: 37  VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY 96
           +I L MG+P             EA   AL   + +GY P  G    R+AI ++  R    
Sbjct: 37  LIDLGMGNPD----GAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGV 92

Query: 97  KLTPN-DVFVTSGCTQAID-VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL 154
           +L P+ +     G  + +  +A+A ++ PG  +L+P P +P +         ++    L 
Sbjct: 93  ELDPDSEALPLLGSKEGLTHLALAYVN-PGDVVLVPSPAYPAHFRGPLIAGAQIYPIILK 151

Query: 155 PDKGWEVDLDDI-ESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
           P+  W +DL  I E +A Q  + L    P NP       +  +++   A K + +++ D 
Sbjct: 152 PENDWLIDLSSIPEEVAQQAKI-LYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDL 210

Query: 214 VYGHLVF-GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
            Y  L F G +P   + + G+    +   +LSK + + GWR+G+ V
Sbjct: 211 CYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVV 256

Length = 394

>gnl|CDD|134568 PRK01533, PRK01533, histidinol-phosphate aminotransferase; Validated

 Score = 62.0 bits (150), Expect = 9e-11
 Identities = 52/191 (27%), Positives = 79/191 (41%), Gaps = 24/191 (12%)

Query: 75  PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGF 134
           P  G    R+ IA  L   +        V   SG  + I +    + + G NI+     F
Sbjct: 62  PDGGATTLRQTIANKLHVKM------EQVLCGSGLDEVIQIISRAVLKAGDNIVTAGATF 115

Query: 135 PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194
           P Y   A     EV+   L        DLD+I S+ D +T  + I NP NP G   + + 
Sbjct: 116 PQYRHHAIIEGCEVKEVAL---NNGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDRK 172

Query: 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-------ILTLGSLSKRW 247
           L +  E  ++  TL++ DE Y         +V    F  T+P       IL L + SK +
Sbjct: 173 LTQFIEGISE-NTLIVIDEAY-------YEYVTAKDFPETLPLLEKHKNILVLRTFSKAY 224

Query: 248 IVPGWRLGWFV 258
            +  +R+G+ V
Sbjct: 225 GLASFRVGYAV 235

Length = 366

>gnl|CDD|235106 PRK03158, PRK03158, histidinol-phosphate aminotransferase; Provisional

 Score = 58.8 bits (143), Expect = 9e-10
 Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 13/161 (8%)

Query: 57  ATEAVAEALLSEKFN-GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID- 114
            +  V EA+ +        P    P  R  +A++L       +    +   +G  + I  
Sbjct: 43  PSPKVKEAIAAHLDELALYPDGYAPELRTKVAKHL------GVDEEQLLFGAGLDEVIQM 96

Query: 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT 174
           ++ ALL+ PG N ++  P F  Y  +A     EVR    +P K    DL+ +    D+ T
Sbjct: 97  ISRALLN-PGTNTVMAEPTFSQYRHNAIIEGAEVRE---VPLKDGGHDLEAMLKAIDEQT 152

Query: 175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVY 215
             + I NP NP G   +++ L    E+      LV+ DE Y
Sbjct: 153 KIVWICNPNNPTGTYVNHEELLSFLESVPS-HVLVVLDEAY 192

Length = 359

>gnl|CDD|178004 PLN02376, PLN02376, 1-aminocyclopropane-1-carboxylate synthase

 Score = 58.9 bits (142), Expect = 1e-09
 Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 17/195 (8%)

Query: 78  GLPLTRRAIAEYLSRDLPYKLT--PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
           GL   R+AIA ++ +    K+T  P  V ++ G T A +  M  L+ PG   L+P P + 
Sbjct: 95  GLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYA 154

Query: 136 IYELSAAFRH-IEVRHFDLLPDKGWEVDLDDIE------SLADQNTVALVIINPGNPCGN 188
            ++    +R  +E+          +++ +D  +        +++    L++ NP NP G 
Sbjct: 155 AFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGT 214

Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLG------- 241
           +     L  L     +    ++ DE+Y   VF    FV +    + V I  +        
Sbjct: 215 MLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIV 274

Query: 242 -SLSKRWIVPGWRLG 255
            SLSK   +PG+R+G
Sbjct: 275 YSLSKDMGLPGFRVG 289

Length = 496

>gnl|CDD|180542 PRK06358, PRK06358, threonine-phosphate decarboxylase; Provisional

 Score = 58.5 bits (142), Expect = 1e-09
 Identities = 34/180 (18%), Positives = 82/180 (45%), Gaps = 11/180 (6%)

Query: 83  RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI-DVAMALLSRPGANILLPRPGFPIYELSA 141
           R+ IA +       +L   +V + +G T+ I ++      +    +L+  P F  YE + 
Sbjct: 60  RKRIASF------EQLDLENVILGNGATELIFNIVKVTKPK---KVLILAPTFAEYERAL 110

Query: 142 AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201
                E+ + +L  +  +  +   +E +  +    + + NP NP G + S + ++K+ + 
Sbjct: 111 KAFDAEIEYAELTEETNFAANEIVLEEI-KEEIDLVFLCNPNNPTGQLISKEEMKKILDK 169

Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261
             K    +I DE +   +  ++    +    +   ++ + + +K + +PG RLG+ +T++
Sbjct: 170 CEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSN 229

Length = 354

>gnl|CDD|179950 PRK05166, PRK05166, histidinol-phosphate aminotransferase; Provisional

 Score = 57.1 bits (138), Expect = 4e-09
 Identities = 46/188 (24%), Positives = 84/188 (44%), Gaps = 8/188 (4%)

Query: 84  RAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF 143
           RA+ E ++      +  + + + +G    I V    + RPG  ++   P FP++E     
Sbjct: 74  RALREAIAAR--TGVPADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHEDYPTM 131

Query: 144 RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETAN 203
               V    + PD G   DLD + +   +    L+  NP NP G+  +   L ++ + A 
Sbjct: 132 MGARVERVTVTPDLG--FDLDALCAAVARAPRMLMFSNPSNPVGSWLTADQLARVLD-AT 188

Query: 204 KLKTLVIADEVYGHLVFGDK-PFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP 262
             +TL++ DE Y     GD  P     +    +P + L + SK + + G R+G+ + +DP
Sbjct: 189 PPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDP 248

Query: 263 --CGMFRK 268
              G+  +
Sbjct: 249 ELVGLLDR 256

Length = 371

>gnl|CDD|236517 PRK09440, avtA, valine--pyruvate transaminase; Provisional

 Score = 57.2 bits (139), Expect = 4e-09
 Identities = 63/261 (24%), Positives = 106/261 (40%), Gaps = 50/261 (19%)

Query: 24  LMQSVDDEKNEKKVISLAMGDPT--------VHSCFHTTHVATEAVAEALLSEKFNGYAP 75
           LM  ++D       I L  G+P                     + +A   L+E    Y  
Sbjct: 19  LMDDLNDGLRTPGAIMLGGGNPAHIPEMEDYFRDLL------ADLLASGKLTEALGNYDG 72

Query: 76  TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN-----ILLP 130
             G      A+A  L+    + ++P ++ +T+G   A      L +   A+     IL P
Sbjct: 73  PQGKDELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFP 132

Query: 131 -RPGFPIY-------ELSAAFR-HIEVRHFDLLPDK--GWEVDLDDIESLADQNTVALVI 179
             P +  Y       +L  ++R +IE     LLP+    + VD + +    D++T A+ +
Sbjct: 133 LAPEYIGYADAGLEEDLFVSYRPNIE-----LLPEGQFKYHVDFEHLH--IDEDTGAICV 185

Query: 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG----HLVFGD-KPFVPMGVFGST 234
             P NP GNV + + L+KL   A +    ++ D  YG     ++F +  P      +   
Sbjct: 186 SRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPL-----WNPN 240

Query: 235 VPILTLGSLSKRWIVPGWRLG 255
           + IL + SLSK  + PG R G
Sbjct: 241 I-ILCM-SLSKLGL-PGVRCG 258

Length = 416

>gnl|CDD|234972 PRK01688, PRK01688, histidinol-phosphate aminotransferase; Provisional

 Score = 56.5 bits (137), Expect = 5e-09
 Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 9/121 (7%)

Query: 98  LTPNDVFVTSGCTQAIDVAMALLSRPGA-NILLPRPGFPIYELSAAFRHIEVRHFDLLPD 156
           + P  V V+ G  + I++ +     PG   IL   P + +Y +SA    +E+R    L +
Sbjct: 72  VKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLDN 131

Query: 157 KGWEVDLDDIESLADQNTVALVII-NPGNPCGNVYSYQHLQKLAE-TANKLKTLVIADEV 214
             W++DL  I    D   V +V + +P NP GN+ + Q L+ L E T    K +V+ADE 
Sbjct: 132 --WQLDLPAIADNLDG--VKVVYVCSPNNPTGNLINPQDLRTLLELTRG--KAIVVADEA 185

Query: 215 Y 215
           Y
Sbjct: 186 Y 186

Length = 351

>gnl|CDD|178069 PLN02450, PLN02450, 1-aminocyclopropane-1-carboxylate synthase

 Score = 57.1 bits (138), Expect = 5e-09
 Identities = 58/198 (29%), Positives = 90/198 (45%), Gaps = 22/198 (11%)

Query: 78  GLPLTRRAIAEYLSRDLPYKLT--PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
           GLP  + A+AE++S     K+T  PN + +T+G T A +  M  L+ PG   LLP P +P
Sbjct: 87  GLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYP 146

Query: 136 IYELSAAFRH-IEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGN 188
            ++    +R  +E+         G+++    +E    Q          ++I NP NP G 
Sbjct: 147 GFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGT 206

Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVF-----GST-----VPI 237
             +   L  L +        +I+DE+Y   VF    FV  M V       +T     V I
Sbjct: 207 TTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHI 266

Query: 238 LTLGSLSKRWIVPGWRLG 255
           +   SLSK   +PG+R+G
Sbjct: 267 VY--SLSKDLGLPGFRVG 282

Length = 468

>gnl|CDD|236009 PRK07392, PRK07392, threonine-phosphate decarboxylase; Validated

 Score = 56.6 bits (137), Expect = 5e-09
 Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 20/144 (13%)

Query: 124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTV--ALVIIN 181
              + L  P F  Y  +       V+   L  D+        +++L  Q T    L++ N
Sbjct: 97  LRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQLTPNDGLLLNN 156

Query: 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT-- 239
           P NP G ++S + +  L E       LV+ DE      F D  F+P     S +P L   
Sbjct: 157 PHNPTGKLWSREAILPLLEQFA----LVVVDE-----AFMD--FLPPDAEQSLIPCLAEY 205

Query: 240 -----LGSLSKRWIVPGWRLGWFV 258
                L SL+K + +PG RLG+ +
Sbjct: 206 PNLIILRSLTKFYSLPGLRLGYAI 229

Length = 360

>gnl|CDD|236444 PRK09275, PRK09275, aspartate aminotransferase; Provisional

 Score = 56.4 bits (137), Expect = 8e-09
 Identities = 62/222 (27%), Positives = 94/222 (42%), Gaps = 42/222 (18%)

Query: 62  AEALLSEKFNGY------APTAGLPLTRRAIAEYLSRDLPYKLTPN---DVFVTSGCTQA 112
           A+  + E  +G        P   L  T + + +YL +++     P    D+F   G T A
Sbjct: 114 ADEFVYELVDGIIGDNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAA 173

Query: 113 I----DVAMA--LLSRPGANILLPRPGF---------PIYELSAAFRHIEVRHFDLLPDK 157
           +    D      LL + G  I L  P F         P Y+L       EV H +   + 
Sbjct: 174 MCYIFDSLKENGLL-KAGDKIALMTPIFTPYLEIPELPRYDL-------EVVHINADEEN 225

Query: 158 GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET-ANKLKTLVI-ADEVY 215
            W+    ++E L D +  AL ++NP NP     S + L+K+A+    K   L+I  D+VY
Sbjct: 226 EWQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVY 285

Query: 216 GHLVFGDKPFVPMGVFGSTVPILTLG--SLSKRWIVPGWRLG 255
           G   F D  F  +    + +P  T+   S SK +   GWRLG
Sbjct: 286 G--TFVDD-FRSL---FAVLPYNTILVYSFSKYFGATGWRLG 321

Length = 527

>gnl|CDD|215327 PLN02607, PLN02607, 1-aminocyclopropane-1-carboxylate synthase

 Score = 56.1 bits (135), Expect = 1e-08
 Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 22/197 (11%)

Query: 78  GLPLTRRAIAEYLS--RDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
           GL   R+A+A ++   R    +  P+ + +T+G T A ++   +L+ PG  +L+P P +P
Sbjct: 96  GLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYP 155

Query: 136 IYELSAAFR---HIEVRHFDLLPDKGWEVDLDDIESLADQNTVA-------LVIINPGNP 185
            ++    +R    I   H D      ++V    +E+ A Q   A       ++I NP NP
Sbjct: 156 GFDRDLRWRTGVKIVPIHCD--SSNNFQVTPQALEA-AYQEAEAANIRVRGVLITNPSNP 212

Query: 186 CGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM-------GVFGSTVPIL 238
            G       L+ + +   +    +++DE+Y   VF    FV +       G  G    + 
Sbjct: 213 LGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVH 272

Query: 239 TLGSLSKRWIVPGWRLG 255
            + SLSK   +PG+R+G
Sbjct: 273 IVYSLSKDLGLPGFRVG 289

Length = 447

>gnl|CDD|235064 PRK02731, PRK02731, histidinol-phosphate aminotransferase; Validated

 Score = 55.5 bits (135), Expect = 1e-08
 Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 23/164 (14%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID-V 115
           A EA+  A   ++ + Y   +G  L + A+AE       + + P  + + +G  + ++ +
Sbjct: 50  AIEAIRAAA--DELHRYPDGSGFEL-KAALAEK------FGVDPERIILGNGSDEILELL 100

Query: 116 AMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFDLLPDKGWEVDLDDIESLAD 171
           A A L  PG  ++    GF +Y ++A    A + +EV      P K +  DLD + +   
Sbjct: 101 ARAYLG-PGDEVIYSEHGFAVYPIAAQAVGA-KPVEV------PAKDYGHDLDAMLAAVT 152

Query: 172 QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVY 215
             T  + I NP NP G     + +++          LV+ DE Y
Sbjct: 153 PRTRLVFIANPNNPTGTYLPAEEVERFLAGVPP-DVLVVLDEAY 195

Length = 367

>gnl|CDD|163513 TIGR03801, asp_4_decarbox, aspartate 4-decarboxylase

 Score = 55.4 bits (134), Expect = 2e-08
 Identities = 56/231 (24%), Positives = 91/231 (39%), Gaps = 55/231 (23%)

Query: 62  AEALLSEKFNGY------APTAGLPLTRRAIAEYLSRDLPYKLTPN---DVFVTSGCTQA 112
            +A L E  +G        P   LP + + + +YL +++     P    D+F   G T A
Sbjct: 108 PDAFLYEMCDGIIGDNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAA 167

Query: 113 I----DVAMA--LLSRPGANI--------------LLPRPGFPIYELSAAFRHIEVRHFD 152
           +    D   A  LL + G  I               LPR  F +  + A     +  H  
Sbjct: 168 MCYIFDSLKANELL-KKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTH-- 224

Query: 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL--KTLVI 210
                 W+    ++E L D +  AL ++NP NP     S + ++K+ +         +++
Sbjct: 225 -----TWQYPDKELEKLRDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMIL 279

Query: 211 ADEVYGHLV------FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG 255
            D+VYG  V      F + P+  +GV+          S SK +   GWRLG
Sbjct: 280 TDDVYGTFVDDFRSLFAELPYNTIGVY----------SFSKYFGATGWRLG 320

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1) [Energy metabolism, Amino acids and amines]. Length = 521

>gnl|CDD|181512 PRK08637, PRK08637, hypothetical protein; Provisional

 Score = 55.0 bits (133), Expect = 2e-08
 Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 23/167 (13%)

Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDV---FVTSGCTQAIDVAMALLSRPGANILL 129
           YAP  G+P  R    E + R+ P  L+   +    VT+  T  + +   L    G  +LL
Sbjct: 40  YAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLL 98

Query: 130 PRPGFPIYELSAAFRH-IEVRHFDLLPDKGWEVDLDDIESL---ADQNTVALVIIN-PGN 184
           P   +  Y+L+   R   E+  + +  + G   D D ++     A      +VI+N P N
Sbjct: 99  PDHNWGNYKLTFNTRRGAEIVTYPIFDEDG-GFDTDALKEALQAAYNKGKVIVILNFPNN 157

Query: 185 PCGNVYS---------YQHLQKLAETANKLKTLVIADEVYGHLVFGD 222
           P G  Y+          + +++LA+   K+  + + D+ Y  L + D
Sbjct: 158 PTG--YTPTEKEATAIVEAIKELADAGTKV--VAVVDDAYFGLFYED 200

Length = 388

>gnl|CDD|184829 PRK14807, PRK14807, histidinol-phosphate aminotransferase; Provisional

 Score = 54.5 bits (131), Expect = 2e-08
 Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 21/204 (10%)

Query: 59  EAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMA 118
           + + E + S + N Y       L R  +A Y S      + P ++FV +G  + I + M 
Sbjct: 42  KNIQEIVKSSQVNIYPDPTAEKL-REELARYCS------VVPTNIFVGNGSDEIIHLIML 94

Query: 119 LLSRPGANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTV 175
                G  ++ P P F +Y +    A    I V+   L  D  ++V    I+ +      
Sbjct: 95  AFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVK---LKEDYTYDVG-SFIKVIEKYQPK 150

Query: 176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235
            + + NP NP G+V   + + K+ E +     +V+ DE Y    F     V   V     
Sbjct: 151 LVFLCNPNNPTGSVIEREDIIKIIEKSRG---IVVVDEAY--FEFYGNTIVD--VINEFE 203

Query: 236 PILTLGSLSKRWIVPGWRLGWFVT 259
            ++ L +LSK + + G R+G+ V 
Sbjct: 204 NLIVLRTLSKAFGLAGLRVGYAVA 227

Length = 351

>gnl|CDD|178597 PLN03026, PLN03026, histidinol-phosphate aminotransferase; Provisional

 Score = 53.9 bits (130), Expect = 4e-08
 Identities = 47/156 (30%), Positives = 67/156 (42%), Gaps = 13/156 (8%)

Query: 61  VAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL 120
           V EAL + KF    P       R A+AE     L       ++ V  G  + ID+ M  +
Sbjct: 70  VLEALGNMKFPYVYPDPESRRLRAALAED--SGLE----SENILVGCGADELIDLLMRCV 123

Query: 121 SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDI-ESLADQNTVALVI 179
             PG  I+   P F +Y   AA    EV      PD  + +D+  I E++       L +
Sbjct: 124 LDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPD--FSLDVPRIVEAVETHKPKLLFL 181

Query: 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVY 215
            +P NP G++ S   L K+ E    L  LV+ DE Y
Sbjct: 182 TSPNNPDGSIISDDDLLKILE----LPILVVLDEAY 213

Length = 380

>gnl|CDD|235742 PRK06207, PRK06207, aspartate aminotransferase; Provisional

 Score = 54.0 bits (130), Expect = 4e-08
 Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 19/137 (13%)

Query: 146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL 205
           +++ +     DK   +DLD +E          +  NP NP G VYS + + ++A  A + 
Sbjct: 153 VQLDYLSA--DKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRY 210

Query: 206 KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI-----LTLGSLSKRWIVPGWRLGWFVTT 260
              VI D++Y  L++    +  +      +PI     +T+   SK   + G+RLG     
Sbjct: 211 GATVIVDQLYSRLLYDGTSYTHL----RALPIDPENVITIMGPSKTESLSGYRLGV---- 262

Query: 261 DPCGMFRKPKVVERMKK 277
                F  P +++RM+K
Sbjct: 263 ----AFGSPAIIDRMEK 275

Length = 405

>gnl|CDD|181212 PRK08056, PRK08056, threonine-phosphate decarboxylase; Provisional

 Score = 53.9 bits (130), Expect = 4e-08
 Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 10/151 (6%)

Query: 128 LLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG 187
           ++  PGF  Y  +      E+R + L    GW++    +E+L       L +  P NP G
Sbjct: 98  MIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLTDAILEALTPDLD-CLFLCTPNNPTG 156

Query: 188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW 247
            +   Q LQ +AE    L   +I DE +   +  +  F+P         +  L SL+K +
Sbjct: 157 LLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIP--QLADNPHLWVLRSLTKFY 214

Query: 248 IVPGWRLGWFVTTDPCGMFRKPKVVERMKKY 278
            +PG RLG+ V +D          V RM++ 
Sbjct: 215 AIPGLRLGYLVNSDDAA-------VARMRRQ 238

Length = 356

>gnl|CDD|181053 PRK07590, PRK07590, L,L-diaminopimelate aminotransferase; Validated

 Score = 53.7 bits (130), Expect = 4e-08
 Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 27/201 (13%)

Query: 31  EKN-EKKVISLAMGD---PTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAI 86
           E N E K+I L +GD   P   +     H A + +  A   E F GY P  G    R  I
Sbjct: 29  EANPEAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTA---ETFRGYGPEQGYDFLREKI 85

Query: 87  AEYLSRDLPYKLTPNDVFVTSG--CTQAIDVAMAL-LSRPGANILLPRPGFPIYELSAAF 143
           AE   +     ++ +++F++ G  C    D    L +  P   I +  P +P+Y  +   
Sbjct: 86  AENDYQARGCDISADEIFISDGAKC----DTGNILDIFGPDNTIAVTDPVYPVYVDTN-- 139

Query: 144 RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALV------II---NPGNPCGNVYSYQH 194
             +  R  +   D  +   +  +   A+ N V  +      II    P NP G V + + 
Sbjct: 140 -VMAGRTGEANEDGRYS-GIVYLPCTAENNFVPELPEEKVDIIYLCFPNNPTGTVLTKEQ 197

Query: 195 LQKLAETANKLKTLVIADEVY 215
           L+   + A +  +L++ D  Y
Sbjct: 198 LKAWVDYAKENGSLILFDAAY 218

Length = 409

>gnl|CDD|167650 PRK03967, PRK03967, histidinol-phosphate aminotransferase; Provisional

 Score = 53.2 bits (128), Expect = 5e-08
 Identities = 58/231 (25%), Positives = 91/231 (39%), Gaps = 37/231 (16%)

Query: 59  EAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMA 118
           E + E L    FN Y P       R AIAE+      Y L   ++ V +G  + I   + 
Sbjct: 38  EEIFEELKRVPFNRY-PHITSDPLREAIAEF------YGLDAENIAVGNGSDELISYLVK 90

Query: 119 LLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALV 178
           L    G +I++  P F +Y   A    I V    L  D  + +D + I   A  N  A+ 
Sbjct: 91  LFE--GKHIVITPPTFGMYSFYAKLNGIPVIDVPLKED--FTIDGERIAEKAK-NASAVF 145

Query: 179 IINPGNPCGNVYSYQHLQKLAETANKLKT--LVIADEVYGHLVFGDKPFVPMGVFGSTVP 236
           I +P NP GN      LQ   E    L+T   V+ DE Y    F  K  + +        
Sbjct: 146 ICSPNNPTGN------LQPEEEILKVLETGKPVVLDEAYAE--FSGKSLIGL--IDEYPN 195

Query: 237 ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK-----YFDIL 282
           ++ L + SK + + G R G+             ++++ + +       +IL
Sbjct: 196 LILLRTFSKAFGLAGIRAGY--------AIANEEIIDALYRIKPPFSLNIL 238

Length = 337

>gnl|CDD|236128 PRK07908, PRK07908, hypothetical protein; Provisional

 Score = 53.1 bits (128), Expect = 6e-08
 Identities = 55/187 (29%), Positives = 81/187 (43%), Gaps = 42/187 (22%)

Query: 82  TRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPR------PGFP 135
            R A+A    R      TP++V + +G  +      ALL+R     L PR      P F 
Sbjct: 63  ARAAVAARHGR------TPDEVLLLAGAAEG----FALLAR-----LRPRRAAVVHPSFT 107

Query: 136 IYELSAAFRH--IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII-NPGNPCGNVYSY 192
             E  AA R   I V    L P   + +D   +   AD     LV+I NP NP   ++  
Sbjct: 108 --EPEAALRAAGIPVHRVVLDPP--FRLDPAAVPDDAD-----LVVIGNPTNPTSVLHPA 158

Query: 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRWIVPG 251
           + L  L       + LV+ DE +   V G+    P  + G  +P +L L SL+K W + G
Sbjct: 159 EQLLALRRPG---RILVV-DEAFADAVPGE----PESLAGDDLPGVLVLRSLTKTWSLAG 210

Query: 252 WRLGWFV 258
            R+G+ +
Sbjct: 211 LRVGYAL 217

Length = 349

>gnl|CDD|179888 PRK04870, PRK04870, histidinol-phosphate aminotransferase; Provisional

 Score = 52.6 bits (127), Expect = 1e-07
 Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 9/114 (7%)

Query: 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT 174
           +A+A  ++PGA +L P PGF +Y +SA    +E     L  D  + +DL  + +   ++ 
Sbjct: 97  LALAC-AKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTAD--FTLDLPAMLAAIAEHR 153

Query: 175 VALVIIN-PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP 227
            ALV +  P NP GN++    ++++ E A     LV+ DE Y    F    ++P
Sbjct: 154 PALVFLAYPNNPTGNLFDDADVERIIEAA---PGLVVVDEAYQ--PFAGDSWLP 202

Length = 356

>gnl|CDD|226485 COG3977, COG3977, Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

 Score = 52.8 bits (127), Expect = 1e-07
 Identities = 66/258 (25%), Positives = 104/258 (40%), Gaps = 38/258 (14%)

Query: 21  LSLLMQSVDDEKNEKKVISLAMGDPT----VHSCFHTTHVATEAVAEALLSEKFNGYAPT 76
           ++ LM  ++D       I L  G+P     +   F       E +A    +E    Y   
Sbjct: 16  ITQLMDDLNDGLRTPGAIMLGGGNPARIPEMDDYFQDL--LAEMLASGKATEALCNYDGP 73

Query: 77  AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN-----ILLPR 131
            G  +   A+A+ L R+  + +T  ++ +T+G   A      L +   ++     ILLP 
Sbjct: 74  QGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPL 133

Query: 132 PGFPIYELSAAFRHIEVRHF-------DLLPDK--GWEVDLDDIESLADQNTVALVIINP 182
              P Y +  A   +E   F       +LLP     + VD + +     ++T A+ +  P
Sbjct: 134 A--PEY-IGYADAGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLHI--GESTGAICVSRP 188

Query: 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-----I 237
            NP GNV + + L KL   A +    +I D  YG       PF P  +F    P     I
Sbjct: 189 TNPTGNVLTDEELAKLDALARQHGIPLIIDNAYG------VPF-PGIIFSDATPLWNENI 241

Query: 238 LTLGSLSKRWIVPGWRLG 255
           +   SLSK  + PG R G
Sbjct: 242 ILCMSLSKLGL-PGSRCG 258

Length = 417

>gnl|CDD|234872 PRK00950, PRK00950, histidinol-phosphate aminotransferase; Validated

 Score = 52.2 bits (126), Expect = 1e-07
 Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 15/160 (9%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT-SGCTQAIDV 115
           A EA+ + L   K + Y P    P  R A+++Y        +   ++ V   G  + ID 
Sbjct: 52  AVEAIEKEL--SKIHRY-PEPDAPELREALSKY------TGVPVENIIVGGDGMDEVIDT 102

Query: 116 AMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTV 175
            M     PG  +++P P F  YE+SA     +  +     D  + +D+D + +   + T 
Sbjct: 103 LMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKREED--FSLDVDSVLNAITEKTK 160

Query: 176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVY 215
            + +  P NP GN+   + ++K+ E       LV  DE Y
Sbjct: 161 VIFLCTPNNPTGNLIPEEDIRKILE---STDALVFVDEAY 197

Length = 361

>gnl|CDD|236316 PRK08636, PRK08636, aspartate aminotransferase; Provisional

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 62/263 (23%), Positives = 111/263 (42%), Gaps = 38/263 (14%)

Query: 37  VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY 96
           +I  +MG+P   +  H      + + E+    K +GY+ + G+   R AI  +  R    
Sbjct: 35  IIDFSMGNPDGPTPQHII----DKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNV 90

Query: 97  KLTPN-DVFVTSGC-------TQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEV 148
            L P  +V  T G         QAI       + PG   ++P P +PI+  +       V
Sbjct: 91  DLDPETEVVATMGSKEGYVHLVQAI-------TNPGDVAIVPDPAYPIHSQAFILAGGNV 143

Query: 149 RHFDLLPDKGWEVDLD----DIESLADQNT--VALVIIN-PGNPCGNVYSYQHLQKLAET 201
               L  ++ +E+D D    ++E    +++     V++N P NP          ++L   
Sbjct: 144 HKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVAL 203

Query: 202 ANKLKTLVIADEVYGHLVF-GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT 260
           A K +  +I+D  Y  + F G K    + V G+    +   +LSK + + GWR+G+ V  
Sbjct: 204 AKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGN 263

Query: 261 DPCGMFRKPKVV---ERMKKYFD 280
                    K+V   +++K + D
Sbjct: 264 --------KKLVGALKKIKSWLD 278

Length = 403

>gnl|CDD|235311 PRK04781, PRK04781, histidinol-phosphate aminotransferase; Provisional

 Score = 50.7 bits (121), Expect = 5e-07
 Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 7/163 (4%)

Query: 96  YKLTPNDVFVTSGCTQAIDVAMALLSRPGAN-ILLPRPGFPIYELSAAFRHIEVRHFDLL 154
           Y   P  + +  G  +AID+ +  L  PG + +L+  P F +Y + A  ++  +    L+
Sbjct: 72  YGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLV 131

Query: 155 PDK-GWEVDLDDIESLADQNTVALVII-NPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212
               G+  D+  I + A  +   LV + +P NP G+  +   +++  +     K LV+ D
Sbjct: 132 DGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQG-KALVVVD 190

Query: 213 EVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG 255
           E YG   F D P   +G+      +  L +LSK   +   R+G
Sbjct: 191 EAYGE--FSDVPSA-VGLLARYDNLAVLRTLSKAHALAAARIG 230

Length = 364

>gnl|CDD|169399 PRK08354, PRK08354, putative aminotransferase; Provisional

 Score = 47.4 bits (113), Expect = 4e-06
 Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 18/169 (10%)

Query: 88  EYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIE 147
           E+L  +   KL    + +T+G T+A+ +   L  R    +++PR  +  YE  A F    
Sbjct: 43  EWLEEEF-SKLFGEPIVITAGITEALYLIGILALR-DRKVIIPRHTYGEYERVARFFAAR 100

Query: 148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207
           +        KG   D + +E L ++N+V +   NP NP G  Y+++ L+ L +       
Sbjct: 101 II-------KG-PNDPEKLEELVERNSV-VFFCNPNNPDGKFYNFKELKPLLDAVEDRNA 151

Query: 208 LVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW 256
           L+I DE      F D  FV          I+ L + +K + +PG R+G+
Sbjct: 152 LLILDE-----AFID--FVKKPESPEGENIIKLRTFTKSYGLPGIRVGY 193

Length = 311

>gnl|CDD|102370 PRK06425, PRK06425, histidinol-phosphate aminotransferase; Validated

 Score = 46.0 bits (109), Expect = 1e-05
 Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 22/151 (14%)

Query: 126 NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP 185
           NI++  P F  Y+  A    I       LP   + +  ++ E L + N   + I++P NP
Sbjct: 81  NIIIVEPNFNEYKGYAFTHGIR---ISALP---FNLINNNPEILNNYNFDLIFIVSPDNP 134

Query: 186 CGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI------LT 239
            GN+ S   L  ++E   K   L+  DE      F D  FVP       V +      + 
Sbjct: 135 LGNLISRDSLLTISEICRKKGALLFIDE-----AFID--FVP-NRAEEDVLLNRSYGNVI 186

Query: 240 LG-SLSKRWIVPGWRLGWFVTTD-PCGMFRK 268
           +G SL+K   +P  R+G+  T D    + RK
Sbjct: 187 IGRSLTKILGIPSLRIGYIATDDYNMKISRK 217

Length = 332

>gnl|CDD|181651 PRK09105, PRK09105, putative aminotransferase; Provisional

 Score = 44.6 bits (106), Expect = 4e-05
 Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 21/185 (11%)

Query: 97  KLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD 156
            L  + V   +G ++ ++ A+   + P A ++   P +     +A  +   V    L  D
Sbjct: 92  GLPADHVMAYAGSSEPLNYAVLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRAD 151

Query: 157 KGWEVDLDDIESL--ADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLK-TLVIADE 213
                   D++++  AD N   + I NP NP G V     ++ L   ANK   ++++ DE
Sbjct: 152 GA-----HDVKAMLAADPNAGLIYICNPNNPTGTVTPRADIEWLL--ANKPAGSVLLVDE 204

Query: 214 VYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273
            Y H  F D P V + +      ++ L + SK + + G RLG            +P ++ 
Sbjct: 205 AYIH--FSDAPSV-VDLVAQRKDLIVLRTFSKLYGMAGMRLGL--------AAARPDLLA 253

Query: 274 RMKKY 278
           ++ ++
Sbjct: 254 KLARF 258

Length = 370

>gnl|CDD|179869 PRK04635, PRK04635, histidinol-phosphate aminotransferase; Provisional

 Score = 44.3 bits (105), Expect = 5e-05
 Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 9/121 (7%)

Query: 97  KLTPNDVFVTSGCTQAIDVAMALLSRPGAN-ILLPRPGFPIYELSAAFRHIEVRHFDLLP 155
            + P  +  + G  +AI++ +     PG + I    P + +Y +SA   ++ V+   L  
Sbjct: 74  GVAPEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTA 133

Query: 156 DKGWEVDLDDIESLADQNTVALVII-NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEV 214
           D  +++ LD IE L       LV I NP NP G V     +++L E       +V+ DE 
Sbjct: 134 D--YQLPLDYIEQLDG---AKLVFICNPNNPTGTVIDRADIEQLIEMTP--DAIVVVDEA 186

Query: 215 Y 215
           Y
Sbjct: 187 Y 187

Length = 354

>gnl|CDD|224365 COG1448, TyrB, Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

 Score = 43.8 bits (104), Expect = 7e-05
 Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 19/171 (11%)

Query: 60  AVAEA---LLSEKFN-GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDV--FVTSGCTQAI 113
           AV +A   LL ++    Y P  GLP    A+ + L       L  + V    T G T A+
Sbjct: 48  AVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGAL 107

Query: 114 DVAMALLSR--PGANILLPRPGFPIYELSAAFRH--IEVRHFDLLPDKGWEVDLDDIESL 169
            VA   L+R  P A + +  P +P +   A F    +EV  +     +   +D D +  L
Sbjct: 108 RVAADFLARFFPDATVWISDPTWPNH--KAIFEAAGLEVETYPYYDAETKGLDFDGM--L 163

Query: 170 ADQNTVA---LVIINP--GNPCGNVYSYQHLQKLAETANKLKTLVIADEVY 215
           AD  T     +V+++    NP G   + +  Q+LA+   +   +   D  Y
Sbjct: 164 ADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAY 214

Length = 396

>gnl|CDD|223699 COG0626, MetC, Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

 Score = 43.0 bits (102), Expect = 1e-04
 Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 13/120 (10%)

Query: 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGF-PIYELSAAFR---HIEVRHFDLLPD 156
            D F  S    AI  A+  L + G ++LLP   +   Y L         +EV   D    
Sbjct: 79  EDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDP--- 135

Query: 157 KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG 216
                D     ++ + NT  + +  P NP   V     +  +A  A     LV+ D  + 
Sbjct: 136 ---GDDEALEAAIKEPNTKLVFLETPSNPLLEV---PDIPAIARLAKAYGALVVVDNTFA 189

Length = 396

>gnl|CDD|99738 cd00614, CGS_like, CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

 Score = 41.8 bits (99), Expect = 4e-04
 Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 18/107 (16%)

Query: 112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEV------DLDD 165
           AI   +  L + G +++     +        +R  E     LLP  G EV      D + 
Sbjct: 67  AISTVLLALLKAGDHVVASDDLY-----GGTYRLFE----RLLPKLGIEVTFVDPDDPEA 117

Query: 166 IESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212
           +E+     T  + + +P NP   V     ++ +AE A++   L++ D
Sbjct: 118 LEAAIKPETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVD 161

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life. Length = 369

>gnl|CDD|224919 COG2008, GLY1, Threonine aldolase [Amino acid transport and metabolism]

 Score = 41.1 bits (97), Expect = 4e-04
 Identities = 34/158 (21%), Positives = 56/158 (35%), Gaps = 22/158 (13%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRA---IAEYLSRDLPYKLTPNDVFVTSGCTQAI 113
            T  + EAL +    G       P T      IAE   ++         +FV SG TQA 
Sbjct: 12  PTPEMREALAAANAVGDDVYGEDPTTNALEQRIAELFGKE-------AALFVPSG-TQAN 63

Query: 114 DVAMALLSRPGANILLPRPG-FPIYELSAA--FRHIEVRHFDLLPDKGWEVDLDDIESLA 170
            +A+A   +PG +++          E  A   F   +       P    ++  +D+E+  
Sbjct: 64  QLALAAHCQPGESVICHETAHIYTDECGAPEFFGGGQKLPIV--PGADGKLTPEDVEAAI 121

Query: 171 DQN------TVALVIINPGNPCGNVYSYQHLQKLAETA 202
             +      T   V+ N     G VY    L+ ++   
Sbjct: 122 RPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVC 159

Length = 342

>gnl|CDD|215829 pfam00266, Aminotran_5, Aminotransferase class-V

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 23/148 (15%)

Query: 82  TRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID-VAMALLS--RPGANILLPRPG----- 133
            R  +AE+++     ++    +F TSG T+AI+ VA++L    +PG  IL+         
Sbjct: 48  AREKVAEFINAPSDEEI----IF-TSGTTEAINLVAISLGRSLKPGDEILVTEMEHHANL 102

Query: 134 FPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG-NPCGNVYSY 192
            P  EL A      VR   +  D    +DLD +E L    T  LV I    N  G V   
Sbjct: 103 VPWQEL-AKRTGATVRVIPV--DPNGLLDLDALEKLLTPRT-KLVAITHVSNVTGTV--- 155

Query: 193 QHLQKLAETANKLKTLVIADEV--YGHL 218
             ++++ + A++   LV+ D     GH 
Sbjct: 156 NPVEEIGKLAHEYGALVVVDAAQAVGHR 183

This domain is found in amino transferases, and other enzymes including cysteine desulphurase EC:4.4.1.-. Length = 370

>gnl|CDD|234769 PRK00451, PRK00451, glycine dehydrogenase subunit 1; Validated

 Score = 40.1 bits (95), Expect = 0.001
 Identities = 24/101 (23%), Positives = 41/101 (40%), Gaps = 11/101 (10%)

Query: 115 VAMALLSRPGANILLPRPGFPIY----ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170
             MA+       +L+     P Y    +     + IEV             DL+ +E+  
Sbjct: 145 ALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDGV---TDLEALEAAV 201

Query: 171 DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211
           D +T A+V+  P N  G +   + L+++AE A+    L I 
Sbjct: 202 DDDTAAVVVQYP-NFFGVI---EDLEEIAEIAHAGGALFIV 238

Length = 447

>gnl|CDD|99742 cd01494, AAT_I, Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

 Score = 37.4 bits (87), Expect = 0.004
 Identities = 29/151 (19%), Positives = 53/151 (35%), Gaps = 10/151 (6%)

Query: 87  AEYLSRDLPYKLTPND--VFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFR 144
            E L   L   L P +         T A + A+  L  PG  +++   G       AA  
Sbjct: 2   LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAEL 61

Query: 145 H-IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII-NPGNPCGNVYSYQHLQKLAETA 202
              +     +       +D+  +E L  +  VAL++I       G +   + ++K+A+  
Sbjct: 62  AGAKPVPVPVDDAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAK-- 119

Query: 203 NKLKTLVIADEVYGHLVFG-DKPFVPMGVFG 232
            +   L++ D            P V +   G
Sbjct: 120 -EYGILLLVDAA--SAGGASPAPGVLIPEGG 147

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), and D-amino acid superfamily (fold type IV) and Glycogen phophorylase family (fold type V). Length = 170

>gnl|CDD|235053 PRK02610, PRK02610, histidinol-phosphate aminotransferase; Provisional

 Score = 38.5 bits (90), Expect = 0.004
 Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 14/142 (9%)

Query: 83  RRAIAEYLSRDLPYKL--TPNDVFVTSGCTQAID---VAMALLSRPGANILLPRPGFPIY 137
           ++AIAEY++         TP ++ V +G  + I    +A  L      +IL+  P F +Y
Sbjct: 72  KQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLLIATCLGGE--GSILVAEPTFSMY 129

Query: 138 ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---NTVALV-IINPGNPCGNVYSYQ 193
            + A    I V      P+  +E+DL   +S  +Q     V +V +++P +P GN  +  
Sbjct: 130 GILAQTLGIPVVRVGRDPET-FEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAA 188

Query: 194 HLQKLAETANKLKTLVIADEVY 215
            L+ L      +  LV+ DE Y
Sbjct: 189 ELEWLRSLPEDI--LVVIDEAY 208

Length = 374

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	343
COG0436	393	Aspartate/tyrosine/aromatic aminotransferase [Amin	100.0
KOG0259	447	consensus Tyrosine aminotransferase [Amino acid tr	100.0
PLN02656	409	tyrosine transaminase	100.0
PLN00145	430	tyrosine/nicotianamine aminotransferase; Provision	100.0
PLN02187	462	rooty/superroot1	100.0
KOG0257	420	consensus Kynurenine aminotransferase, glutamine t	100.0
PLN00143	409	tyrosine/nicotianamine aminotransferase; Provision	100.0
PLN02368	407	alanine transaminase	100.0
PRK07366	388	succinyldiaminopimelate transaminase; Validated	100.0
PRK13355	517	bifunctional HTH-domain containing protein/aminotr	100.0
PRK07681	399	aspartate aminotransferase; Provisional	100.0
PRK06207	405	aspartate aminotransferase; Provisional	100.0
PRK08068	389	transaminase; Reviewed	100.0
PLN00175	413	aminotransferase family protein; Provisional	100.0
PTZ00433	412	tyrosine aminotransferase; Provisional	100.0
PRK09276	385	LL-diaminopimelate aminotransferase; Provisional	100.0
TIGR03540	383	DapC_direct LL-diaminopimelate aminotransferase. T	100.0
TIGR01264	401	tyr_amTase_E tyrosine aminotransferase, eukaryotic	100.0
PRK09148	405	aminotransferase; Validated	100.0
PRK06855	433	aminotransferase; Validated	100.0
PRK06348	384	aspartate aminotransferase; Provisional	100.0
TIGR01265	403	tyr_nico_aTase tyrosine/nicotianamine aminotransfe	100.0
PRK05942	394	aspartate aminotransferase; Provisional	100.0
PRK06290	410	aspartate aminotransferase; Provisional	100.0
PRK08636	403	aspartate aminotransferase; Provisional	100.0
PRK09147	396	succinyldiaminopimelate transaminase; Provisional	100.0
PRK06107	402	aspartate aminotransferase; Provisional	100.0
PTZ00377	481	alanine aminotransferase; Provisional	100.0
PRK08960	387	hypothetical protein; Provisional	100.0
PRK09265	404	aminotransferase AlaT; Validated	100.0
PRK12414	384	putative aminotransferase; Provisional	100.0
PRK07568	397	aspartate aminotransferase; Provisional	100.0
PLN02450	468	1-aminocyclopropane-1-carboxylate synthase	100.0
PRK07337	388	aminotransferase; Validated	100.0
PRK08363	398	alanine aminotransferase; Validated	100.0
PRK09257	396	aromatic amino acid aminotransferase; Provisional	100.0
PLN02607	447	1-aminocyclopropane-1-carboxylate synthase	100.0
PRK05957	389	aspartate aminotransferase; Provisional	100.0
PRK07550	386	hypothetical protein; Provisional	100.0
PRK08361	391	aspartate aminotransferase; Provisional	100.0
PRK05764	393	aspartate aminotransferase; Provisional	100.0
TIGR03538	393	DapC_gpp succinyldiaminopimelate transaminase. Thi	100.0
COG1168	388	MalY Bifunctional PLP-dependent enzyme with beta-c	100.0
PRK06108	382	aspartate aminotransferase; Provisional	100.0
PRK07682	378	hypothetical protein; Validated	100.0
PLN02231	534	alanine transaminase	100.0
PRK08912	387	hypothetical protein; Provisional	100.0
PRK07683	387	aminotransferase A; Validated	100.0
PRK07590	409	L,L-diaminopimelate aminotransferase; Validated	100.0
PTZ00376	404	aspartate aminotransferase; Provisional	100.0
TIGR03537	350	DapC succinyldiaminopimelate transaminase. Note: t	100.0
PRK09082	386	methionine aminotransferase; Validated	100.0
PRK08175	395	aminotransferase; Validated	100.0
PLN02376	496	1-aminocyclopropane-1-carboxylate synthase	100.0
PRK07777	387	aminotransferase; Validated	100.0
PRK07309	391	aromatic amino acid aminotransferase; Validated	100.0
PRK07324	373	transaminase; Validated	100.0
PRK07865	364	N-succinyldiaminopimelate aminotransferase; Review	100.0
PRK05839	374	hypothetical protein; Provisional	100.0
PRK02610	374	histidinol-phosphate aminotransferase; Provisional	100.0
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	100.0
PLN02397	423	aspartate transaminase	100.0
PRK01533	366	histidinol-phosphate aminotransferase; Validated	100.0
TIGR03542	402	DAPAT_plant LL-diaminopimelate aminotransferase. T	100.0
PRK06358	354	threonine-phosphate decarboxylase; Provisional	100.0
PRK15481	431	transcriptional regulatory protein PtsJ; Provision	100.0
PRK06836	394	aspartate aminotransferase; Provisional	100.0
PF00155	363	Aminotran_1_2: Aminotransferase class I and II 1-a	100.0
PRK09440	416	avtA valine--pyruvate transaminase; Provisional	100.0
COG0079	356	HisC Histidinol-phosphate/aromatic aminotransferas	100.0
PRK03317	368	histidinol-phosphate aminotransferase; Provisional	100.0
TIGR03539	357	DapC_actino succinyldiaminopimelate transaminase.	100.0
PRK14809	357	histidinol-phosphate aminotransferase; Provisional	100.0
PRK09275	527	aspartate aminotransferase; Provisional	100.0
PRK08056	356	threonine-phosphate decarboxylase; Provisional	100.0
PRK05166	371	histidinol-phosphate aminotransferase; Provisional	100.0
PRK03158	359	histidinol-phosphate aminotransferase; Provisional	100.0
PRK07392	360	threonine-phosphate decarboxylase; Validated	100.0
PRK06225	380	aspartate aminotransferase; Provisional	100.0
PLN03026	380	histidinol-phosphate aminotransferase; Provisional	100.0
PLN02672	1082	methionine S-methyltransferase	100.0
PRK04870	356	histidinol-phosphate aminotransferase; Provisional	100.0
PRK08637	388	hypothetical protein; Provisional	100.0
PRK09105	370	putative aminotransferase; Provisional	100.0
TIGR03801	521	asp_4_decarbox aspartate 4-decarboxylase. This enz	100.0
PRK14807	351	histidinol-phosphate aminotransferase; Provisional	100.0
PRK08153	369	histidinol-phosphate aminotransferase; Provisional	100.0
PRK03321	352	putative aminotransferase; Provisional	100.0
PRK05387	353	histidinol-phosphate aminotransferase; Provisional	100.0
PRK04781	364	histidinol-phosphate aminotransferase; Provisional	100.0
PRK02731	367	histidinol-phosphate aminotransferase; Validated	100.0
PRK14808	335	histidinol-phosphate aminotransferase; Provisional	100.0
PRK03967	337	histidinol-phosphate aminotransferase; Provisional	100.0
PRK01688	351	histidinol-phosphate aminotransferase; Provisional	100.0
KOG0256	471	consensus 1-aminocyclopropane-1-carboxylate syntha	100.0
TIGR01141	346	hisC histidinol-phosphate aminotransferase. Histid	100.0
PRK07908	349	hypothetical protein; Provisional	100.0
PRK06425	332	histidinol-phosphate aminotransferase; Validated	100.0
PRK04635	354	histidinol-phosphate aminotransferase; Provisional	100.0
PRK05664	330	threonine-phosphate decarboxylase; Reviewed	100.0
PRK06959	339	putative threonine-phosphate decarboxylase; Provis	100.0
PRK00950	361	histidinol-phosphate aminotransferase; Validated	100.0
PRK08354	311	putative aminotransferase; Provisional	100.0
TIGR01140	330	L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy	100.0
COG1448	396	TyrB Aspartate/tyrosine/aromatic aminotransferase	100.0
COG3977	417	Alanine-alpha-ketoisovalerate (or valine-pyruvate)	100.0
KOG0634	472	consensus Aromatic amino acid aminotransferase and	100.0
cd00609	350	AAT_like Aspartate aminotransferase family. This f	100.0
KOG0258	475	consensus Alanine aminotransferase [Amino acid tra	100.0
PRK13238	460	tnaA tryptophanase/L-cysteine desulfhydrase, PLP-d	100.0
cd00617	431	Tnase_like Tryptophanase family (Tnase). This fami	99.97
KOG0633	375	consensus Histidinol phosphate aminotransferase [A	99.96
PLN02822	481	serine palmitoyltransferase	99.96
TIGR00858	360	bioF 8-amino-7-oxononanoate synthase. This model r	99.96
KOG1411	427	consensus Aspartate aminotransferase/Glutamic oxal	99.95
TIGR01822	393	2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A lig	99.95
PRK06939	397	2-amino-3-ketobutyrate coenzyme A ligase; Provisio	99.95
TIGR03576	346	pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158	99.95
PRK07049	427	methionine gamma-lyase; Validated	99.95
PRK10534	333	L-threonine aldolase; Provisional	99.95
KOG1412	410	consensus Aspartate aminotransferase/Glutamic oxal	99.95
cd06452	361	SepCysS Sep-tRNA:Cys-tRNA synthase. This family be	99.95
TIGR01825	385	gly_Cac_T_rel pyridoxal phosphate-dependent acyltr	99.95
cd06502	338	TA_like Low-specificity threonine aldolase (TA). T	99.95
TIGR02539	370	SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation	99.94
PLN02721	353	threonine aldolase	99.94
PRK13392	410	5-aminolevulinate synthase; Provisional	99.94
PRK05958	385	8-amino-7-oxononanoate synthase; Reviewed	99.94
cd00378	402	SHMT Serine-glycine hydroxymethyltransferase (SHMT	99.94
PRK02627	396	acetylornithine aminotransferase; Provisional	99.93
PRK10874	401	cysteine sulfinate desulfinase; Provisional	99.93
TIGR03392	398	FeS_syn_CsdA cysteine desulfurase, catalytic subun	99.93
PRK08247	366	cystathionine gamma-synthase; Reviewed	99.93
TIGR00707	379	argD acetylornithine and succinylornithine aminotr	99.93
PRK07179	407	hypothetical protein; Provisional	99.93
PRK09331	387	Sep-tRNA:Cys-tRNA synthetase; Provisional	99.93
PLN02242	418	methionine gamma-lyase	99.93
cd06454	349	KBL_like KBL_like; this family belongs to the pyri	99.93
PLN02483	489	serine palmitoyltransferase	99.93
TIGR01979	403	sufS cysteine desulfurases, SufS subfamily. This m	99.92
PRK06234	400	methionine gamma-lyase; Provisional	99.92
PRK03244	398	argD acetylornithine aminotransferase; Provisional	99.92
PRK07504	398	O-succinylhomoserine sulfhydrylase; Reviewed	99.92
PRK01278	389	argD acetylornithine transaminase protein; Provisi	99.92
PRK09295	406	bifunctional cysteine desulfurase/selenocysteine l	99.92
TIGR01821	402	5aminolev_synth 5-aminolevulinic acid synthase. Th	99.92
TIGR02080	382	O_succ_thio_ly O-succinylhomoserine (thiol)-lyase.	99.92
PRK08133	390	O-succinylhomoserine sulfhydrylase; Validated	99.92
PRK08249	398	cystathionine gamma-synthase; Provisional	99.91
cd00613	398	GDC-P Glycine cleavage system P-protein, alpha- an	99.91
PRK08776	405	cystathionine gamma-synthase; Provisional	99.91
PRK08045	386	cystathionine gamma-synthase; Provisional	99.91
TIGR01976	397	am_tr_V_VC1184 cysteine desulfurase family protein	99.91
PRK09064	407	5-aminolevulinate synthase; Validated	99.91
PRK07811	388	cystathionine gamma-synthase; Provisional	99.91
PRK06460	376	hypothetical protein; Provisional	99.91
PRK02948	381	cysteine desulfurase; Provisional	99.91
PRK07503	403	methionine gamma-lyase; Provisional	99.91
TIGR01328	391	met_gam_lyase methionine gamma-lyase. This model d	99.91
PRK07810	403	O-succinylhomoserine sulfhydrylase; Provisional	99.91
TIGR01325	380	O_suc_HS_sulf O-succinylhomoserine sulfhydrylase.	99.91
PLN02855	424	Bifunctional selenocysteine lyase/cysteine desulfu	99.9
PRK06767	386	methionine gamma-lyase; Provisional	99.9
PRK07050	394	cystathionine beta-lyase; Provisional	99.9
cd00614	369	CGS_like CGS_like: Cystathionine gamma-synthase is	99.9
PRK08861	388	cystathionine gamma-synthase; Provisional	99.9
PRK13393	406	5-aminolevulinate synthase; Provisional	99.9
cd00610	413	OAT_like Acetyl ornithine aminotransferase family.	99.9
PRK08574	385	cystathionine gamma-synthase; Provisional	99.9
cd06453	373	SufS_like Cysteine desulfurase (SufS)-like. This f	99.9
TIGR03403	382	nifS_epsilon cysteine desulfurase, NifS family, ep	99.9
PRK05093	403	argD bifunctional N-succinyldiaminopimelate-aminot	99.89
PF12897	425	Aminotran_MocR: Alanine-glyoxylate amino-transfera	99.89
TIGR01437	363	selA_rel uncharacterized pyridoxal phosphate-depen	99.89
cd06451	356	AGAT_like Alanine-glyoxylate aminotransferase (AGA	99.89
TIGR01326	418	OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model d	99.89
PRK09028	394	cystathionine beta-lyase; Provisional	99.89
PRK02936	377	argD acetylornithine aminotransferase; Provisional	99.89
TIGR01977	376	am_tr_V_EF2568 cysteine desulfurase family protein	99.89
PRK07582	366	cystathionine gamma-lyase; Validated	99.89
PRK07269	364	cystathionine gamma-synthase; Reviewed	99.88
TIGR00713	423	hemL glutamate-1-semialdehyde-2,1-aminomutase. Thi	99.88
TIGR03301	355	PhnW-AepZ 2-aminoethylphosphonate aminotransferase	99.88
PRK00011	416	glyA serine hydroxymethyltransferase; Reviewed	99.88
PRK04073	396	rocD ornithine--oxo-acid transaminase; Provisional	99.88
TIGR02006	402	IscS cysteine desulfurase IscS. This model represe	99.88
cd06450	345	DOPA_deC_like DOPA decarboxylase family. This fami	99.88
PRK14012	404	cysteine desulfurase; Provisional	99.88
COG0156	388	BioF 7-keto-8-aminopelargonate synthetase and rela	99.88
TIGR01324	377	cysta_beta_ly_B cystathionine beta-lyase, bacteria	99.88
PRK00451	447	glycine dehydrogenase subunit 1; Validated	99.88
TIGR03402	379	FeS_nifS cysteine desulfurase NifS. Members of thi	99.87
PLN03227	392	serine palmitoyltransferase-like protein; Provisio	99.87
PRK08248	431	O-acetylhomoserine aminocarboxypropyltransferase;	99.87
PRK05939	397	hypothetical protein; Provisional	99.87
PLN02409	401	serine--glyoxylate aminotransaminase	99.87
PRK05968	389	hypothetical protein; Provisional	99.87
PRK06702	432	O-acetylhomoserine aminocarboxypropyltransferase;	99.87
PRK11658	379	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate amin	99.86
PRK07671	377	cystathionine beta-lyase; Provisional	99.86
COG0520	405	csdA Selenocysteine lyase/Cysteine desulfurase [Po	99.86
TIGR02379	376	ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase	99.86
PRK13520	371	L-tyrosine decarboxylase; Provisional	99.86
cd00615	294	Orn_deC_like Ornithine decarboxylase family. This	99.86
TIGR03235	353	DNA_S_dndA cysteine desulfurase DndA. This model d	99.86
PRK06084	425	O-acetylhomoserine aminocarboxypropyltransferase;	99.86
PRK11706	375	TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisio	99.86
PLN02651	364	cysteine desulfurase	99.86
TIGR01329	378	cysta_beta_ly_E cystathionine beta-lyase, eukaryot	99.85
PLN02509	464	cystathionine beta-lyase	99.85
PRK12381	406	bifunctional succinylornithine transaminase/acetyl	99.85
TIGR03812	373	tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Membe	99.85
PRK13479	368	2-aminoethylphosphonate--pyruvate transaminase; Pr	99.85
PRK00854	401	rocD ornithine--oxo-acid transaminase; Reviewed	99.85
PRK08064	390	cystathionine beta-lyase; Provisional	99.85
PRK08088	425	4-aminobutyrate aminotransferase; Validated	99.85
TIGR02326	363	transamin_PhnW 2-aminoethylphosphonate--pyruvate t	99.85
PRK05967	395	cystathionine beta-lyase; Provisional	99.85
PRK04260	375	acetylornithine aminotransferase; Provisional	99.84
PRK06176	380	cystathionine gamma-synthase/cystathionine beta-ly	99.84
PTZ00125	400	ornithine aminotransferase-like protein; Provision	99.83
PRK05994	427	O-acetylhomoserine aminocarboxypropyltransferase;	99.83
PLN02955	476	8-amino-7-oxononanoate synthase	99.83
COG1104	386	NifS Cysteine sulfinate desulfinase/cysteine desul	99.83
TIGR03246	397	arg_catab_astC succinylornithine transaminase fami	99.82
TIGR03588	380	PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-amin	99.82
cd00616	352	AHBA_syn 3-amino-5-hydroxybenzoic acid synthase fa	99.82
PRK08134	433	O-acetylhomoserine aminocarboxypropyltransferase;	99.82
PRK07505	402	hypothetical protein; Provisional	99.81
PRK07812	436	O-acetylhomoserine aminocarboxypropyltransferase;	99.81
PLN00144	382	acetylornithine transaminase	99.8
COG0399	374	WecE Predicted pyridoxal phosphate-dependent enzym	99.8
cd01494	170	AAT_I Aspartate aminotransferase (AAT) superfamily	99.8
TIGR02618	450	tyr_phenol_ly tyrosine phenol-lyase. This model de	99.8
PF01041	363	DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe	99.8
PRK15407	438	lipopolysaccharide biosynthesis protein RfbH; Prov	99.79
COG2008	342	GLY1 Threonine aldolase [Amino acid transport and	99.79
PRK09792	421	4-aminobutyrate transaminase; Provisional	99.78
PRK04366	481	glycine dehydrogenase subunit 2; Validated	99.78
PF01053	386	Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent	99.78
PRK00062	426	glutamate-1-semialdehyde aminotransferase; Provisi	99.78
PRK08114	395	cystathionine beta-lyase; Provisional	99.78
PF00266	371	Aminotran_5: Aminotransferase class-V; InterPro: I	99.78
TIGR03531	444	selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium tr	99.78
PRK05937	370	8-amino-7-oxononanoate synthase; Provisional	99.77
PRK05613	437	O-acetylhomoserine aminocarboxypropyltransferase;	99.77
KOG1549	428	consensus Cysteine desulfurase NFS1 [Amino acid tr	99.77
PRK04612	408	argD acetylornithine transaminase protein; Provisi	99.77
PRK06777	421	4-aminobutyrate aminotransferase; Provisional	99.77
TIGR00700	420	GABAtrnsam 4-aminobutyrate aminotransferase, proka	99.76
TIGR01885	401	Orn_aminotrans ornithine aminotransferase. This mo	99.76
PRK13237	460	tyrosine phenol-lyase; Provisional	99.75
PRK06918	451	4-aminobutyrate aminotransferase; Reviewed	99.75
PRK08360	443	4-aminobutyrate aminotransferase; Provisional	99.75
PLN02624	474	ornithine-delta-aminotransferase	99.74
COG0626	396	MetC Cystathionine beta-lyases/cystathionine gamma	99.74
PRK13034	416	serine hydroxymethyltransferase; Reviewed	99.74
PRK06434	384	cystathionine gamma-lyase; Validated	99.73
KOG0053	409	consensus Cystathionine beta-lyases/cystathionine	99.73
KOG1368	384	consensus Threonine aldolase [Amino acid transport	99.73
PRK07495	425	4-aminobutyrate aminotransferase; Provisional	99.72
COG2873	426	MET17 O-acetylhomoserine sulfhydrylase [Amino acid	99.7
TIGR01788	431	Glu-decarb-GAD glutamate decarboxylase. This model	99.7
TIGR01814	406	kynureninase kynureninase. This model describes ky	99.7
PRK02769	380	histidine decarboxylase; Provisional	99.69
PRK08117	433	4-aminobutyrate aminotransferase; Provisional	99.69
PF01212	290	Beta_elim_lyase: Beta-eliminating lyase; InterPro:	99.69
PRK06058	443	4-aminobutyrate aminotransferase; Provisional	99.68
PRK04311	464	selenocysteine synthase; Provisional	99.68
KOG1360	570	consensus 5-aminolevulinate synthase [Coenzyme tra	99.67
PF01276	417	OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain;	99.67
COG0076	460	GadB Glutamate decarboxylase and related PLP-depen	99.67
PRK03715	395	argD acetylornithine transaminase protein; Provisi	99.65
COG4992	404	ArgD Ornithine/acetylornithine aminotransferase [A	99.65
PRK05964	423	adenosylmethionine--8-amino-7-oxononanoate transam	99.65
PRK13580	493	serine hydroxymethyltransferase; Provisional	99.65
PRK09264	425	diaminobutyrate--2-oxoglutarate aminotransferase;	99.65
PLN03032	374	serine decarboxylase; Provisional	99.65
TIGR00474	454	selA seryl-tRNA(sec) selenium transferase. In bact	99.64
COG0075	383	Serine-pyruvate aminotransferase/archaeal aspartat	99.63
TIGR02407	412	ectoine_ectB diaminobutyrate--2-oxoglutarate amino	99.63
TIGR00709	442	dat 2,4-diaminobutyrate 4-transaminases. This fami	99.62
PRK06541	460	hypothetical protein; Provisional	99.62
COG1103	382	Archaea-specific pyridoxal phosphate-dependent enz	99.61
PTZ00094	452	serine hydroxymethyltransferase; Provisional	99.61
PLN02271	586	serine hydroxymethyltransferase	99.57
PLN02590	539	probable tyrosine decarboxylase	99.57
PLN03226	475	serine hydroxymethyltransferase; Provisional	99.57
cd00611	355	PSAT_like Phosphoserine aminotransferase (PSAT) fa	99.56
COG0160	447	GabT 4-aminobutyrate aminotransferase and related	99.56
COG0001	432	HemL Glutamate-1-semialdehyde aminotransferase [Co	99.55
PRK05769	441	4-aminobutyrate aminotransferase; Provisional	99.55
PRK08593	445	4-aminobutyrate aminotransferase; Provisional	99.54
PLN02880	490	tyrosine decarboxylase	99.54
PF00464	399	SHMT: Serine hydroxymethyltransferase; InterPro: I	99.54
PRK15029	755	arginine decarboxylase; Provisional	99.53
PLN02724	805	Molybdenum cofactor sulfurase	99.52
KOG1359	417	consensus Glycine C-acetyltransferase/2-amino-3-ke	99.52
PLN02263	470	serine decarboxylase	99.52
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.51
PLN02994	153	1-aminocyclopropane-1-carboxylate synthase	99.49
PF00282	373	Pyridoxal_deC: Pyridoxal-dependent decarboxylase c	99.49
PLN02482	474	glutamate-1-semialdehyde 2,1-aminomutase	99.49
TIGR03372	442	putres_am_tran putrescine aminotransferase. Member	99.49
PRK04013	364	argD acetylornithine/acetyl-lysine aminotransferas	99.48
COG0112	413	GlyA Glycine/serine hydroxymethyltransferase [Amin	99.48
PF04864	363	Alliinase_C: Allinase; InterPro: IPR006948 Allicin	99.47
PRK11522	459	putrescine--2-oxoglutarate aminotransferase; Provi	99.47
PRK13578	720	ornithine decarboxylase; Provisional	99.46
PRK00615	433	glutamate-1-semialdehyde aminotransferase; Provisi	99.45
PRK12389	428	glutamate-1-semialdehyde aminotransferase; Provisi	99.45
PRK06105	460	aminotransferase; Provisional	99.44
TIGR01364	349	serC_1 phosphoserine aminotransferase. This model	99.44
TIGR03799	522	NOD_PanD_pyr putative pyridoxal-dependent aspartat	99.44
PLN02760	504	4-aminobutyrate:pyruvate transaminase	99.44
PRK07046	453	aminotransferase; Validated	99.44
PRK05965	459	hypothetical protein; Provisional	99.44
PRK07482	461	hypothetical protein; Provisional	99.44
PRK03080	378	phosphoserine aminotransferase; Provisional	99.44
PRK05639	457	4-aminobutyrate aminotransferase; Provisional	99.42
PRK07986	428	adenosylmethionine--8-amino-7-oxononanoate transam	99.42
PRK13360	442	omega amino acid--pyruvate transaminase; Provision	99.41
PRK07678	451	aminotransferase; Validated	99.41
PRK05630	422	adenosylmethionine--8-amino-7-oxononanoate transam	99.41
PRK12403	460	putative aminotransferase; Provisional	99.41
PRK06082	459	4-aminobutyrate aminotransferase; Provisional	99.41
PRK09221	445	beta alanine--pyruvate transaminase; Provisional	99.4
TIGR02617	467	tnaA_trp_ase tryptophanase, leader peptide-associa	99.39
PRK06149	972	hypothetical protein; Provisional	99.39
PRK06173	429	adenosylmethionine--8-amino-7-oxononanoate transam	99.39
PRK06062	451	hypothetical protein; Provisional	99.38
TIGR00508	427	bioA adenosylmethionine-8-amino-7-oxononanoate tra	99.38
PRK06943	453	adenosylmethionine--8-amino-7-oxononanoate transam	99.37
PRK15400	714	lysine decarboxylase CadA; Provisional	99.37
PRK07481	449	hypothetical protein; Provisional	99.36
KOG1357	519	consensus Serine palmitoyltransferase [Posttransla	99.35
PRK05355	360	3-phosphoserine/phosphohydroxythreonine aminotrans	99.35
PRK06916	460	adenosylmethionine--8-amino-7-oxononanoate transam	99.35
KOG2862	385	consensus Alanine-glyoxylate aminotransferase AGT1	99.35
PRK06917	447	hypothetical protein; Provisional	99.34
PRK07036	466	hypothetical protein; Provisional	99.34
PF00202	339	Aminotran_3: Aminotransferase class-III; InterPro:	99.34
PRK15399	713	lysine decarboxylase LdcC; Provisional	99.33
PRK07030	466	adenosylmethionine--8-amino-7-oxononanoate transam	99.33
PF06838	403	Met_gamma_lyase: Methionine gamma-lyase ; InterPro	99.33
PRK07480	456	putative aminotransferase; Validated	99.32
PRK06209	431	glutamate-1-semialdehyde 2,1-aminomutase; Provisio	99.31
PRK07483	443	hypothetical protein; Provisional	99.31
PRK06148	1013	hypothetical protein; Provisional	99.31
PRK08742	472	adenosylmethionine--8-amino-7-oxononanoate transam	99.3
PRK06938	464	diaminobutyrate--2-oxoglutarate aminotransferase;	99.27
COG0161	449	BioA Adenosylmethionine-8-amino-7-oxononanoate ami	99.18
COG1982	557	LdcC Arginine/lysine/ornithine decarboxylases [Ami	99.18
PRK05367	954	glycine dehydrogenase; Provisional	99.17
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.17
PRK06931	459	diaminobutyrate--2-oxoglutarate aminotransferase;	99.17
KOG1404	442	consensus Alanine-glyoxylate aminotransferase AGT2	99.17
KOG1358	467	consensus Serine palmitoyltransferase [Posttransla	99.15
TIGR01366	361	serC_3 phosphoserine aminotransferase, putative. T	99.12
KOG1401	433	consensus Acetylornithine aminotransferase [Amino	99.12
TIGR03811	608	tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcu	99.11
PRK08297	443	L-lysine aminotransferase; Provisional	99.1
TIGR03251	431	LAT_fam L-lysine 6-transaminase. Characterized mem	99.05
PLN02452	365	phosphoserine transaminase	99.05
COG1921	395	SelA Selenocysteine synthase [seryl-tRNASer seleni	99.04
TIGR00699	464	GABAtrns_euk 4-aminobutyrate aminotransferase, euk	99.03
PLN02974	817	adenosylmethionine-8-amino-7-oxononanoate transami	98.97
COG4100	416	Cystathionine beta-lyase family protein involved i	98.97
TIGR01365	374	serC_2 phosphoserine aminotransferase, Methanosarc	98.96
KOG1383	491	consensus Glutamate decarboxylase/sphingosine phos	98.92
PRK12462	364	phosphoserine aminotransferase; Provisional	98.9
KOG1402	427	consensus Ornithine aminotransferase [Amino acid t	98.88
PRK12566	954	glycine dehydrogenase; Provisional	98.86
PF03841	367	SelA: L-seryl-tRNA selenium transferase; InterPro:	98.8
COG1003	496	GcvP Glycine cleavage system protein P (pyridoxal-	98.76
PLN02414	993	glycine dehydrogenase (decarboxylating)	98.65
PRK05367	954	glycine dehydrogenase; Provisional	98.64
COG3033	471	TnaA Tryptophanase [Amino acid transport and metab	98.58
COG3844	407	Kynureninase [Amino acid transport and metabolism]	98.5
KOG2467	477	consensus Glycine/serine hydroxymethyltransferase	98.48
PF05889	389	SLA_LP_auto_ag: Soluble liver antigen/liver pancre	98.33
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	98.29
PF02347	429	GDC-P: Glycine cleavage system P-protein; InterPro	98.11
KOG0628	511	consensus Aromatic-L-amino-acid/L-histidine decarb	98.0
KOG0629	510	consensus Glutamate decarboxylase and related prot	97.98
KOG1403	452	consensus Predicted alanine-glyoxylate aminotransf	97.96
COG0403	450	GcvP Glycine cleavage system protein P (pyridoxal-	97.72
PLN02672	1082	methionine S-methyltransferase	97.54
PRK12566	954	glycine dehydrogenase; Provisional	97.19
COG1932	365	SerC Phosphoserine aminotransferase [Coenzyme meta	97.09
KOG1405	484	consensus 4-aminobutyrate aminotransferase [Amino	96.96
KOG3843	432	consensus Predicted serine hydroxymethyltransferas	96.55
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	96.27
KOG3846	465	consensus L-kynurenine hydrolase [Amino acid trans	92.06
COG2102	223	Predicted ATPases of PP-loop superfamily [General	85.81
KOG2790	370	consensus Phosphoserine aminotransferase [Coenzyme	85.81
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	83.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	82.85

>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=5.4e-54  Score=392.95  Aligned_cols=296  Identities=28%  Similarity=0.469  Sum_probs=266.8

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCc-EEEecChHHHH
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPND-VFVTSGCTQAI  113 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~-i~~~~g~~~al  113 (343)
                      ..+|+|++|+|+    +++++.+++++.+++.++.. .|.+..|.++||++|++++.+++|..+.+++ |++|+|++++|
T Consensus        28 ~~vi~l~iG~Pd----~~~p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al  102 (393)
T COG0436          28 EDVIDLSIGEPD----FPTPEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEAL  102 (393)
T ss_pred             CCEEEeCCCCCC----CCCCHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHH
Confidence            579999999965    88999999999999887644 7879999999999999999999998888886 99999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCC-CCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD-KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~  192 (343)
                      ..++.+++++||+|++++|.|+.|.......|.+++.+++..+ ++|.+|++.|+++++++++++++++||||||.++++
T Consensus       103 ~~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~~~  182 (393)
T COG0436         103 FLAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSK  182 (393)
T ss_pred             HHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCCcCcCCCH
Confidence            9999999999999999999999999999999999999998665 489999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  271 (343)
                      +++++|+++|++||+++|.||+|..+.|++..+.++..+.. .+++|+++||||+|+++|||+||+++++       +++
T Consensus       183 ~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~-------~~l  255 (393)
T COG0436         183 EELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPP-------EEL  255 (393)
T ss_pred             HHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecCh-------HHH
Confidence            99999999999999999999999999999865555555554 4789999999999999999999999963       468


Q ss_pred             HHHHhhhhc-cccCcchHHHHHHHhccchhhH--HHHH-HHHHHHHHHHHHHHhhcCCCCceeeC-CCCceEeeecC
Q 019298          272 VERMKKYFD-ILGDPATFIQVCIMYGCLSTIM--QIMI-HGNFLENFAGSCVPSYKLIPELINFK-STGSSLKYLDL  343 (343)
Q Consensus       272 ~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~--~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~-~~~g~~~~~~l  343 (343)
                      ++.+.+++. ...+++.+.|.++ .++|++..  .+++ .++.+++||+.+.+.|.+++|+.+.. |+|++|+|+++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~Q~aa-~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i  331 (393)
T COG0436         256 IAALRKLKSYLTSCAPTPAQYAA-IAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKI  331 (393)
T ss_pred             HHHHHHHHHhcccCCCHHHHHHH-HHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeec
Confidence            888887754 4668999999999 88888763  4555 77899999999999999998899777 89999999874

>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=4e-52  Score=356.48  Aligned_cols=328  Identities=55%  Similarity=0.949  Sum_probs=305.8

Q ss_pred             cccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhh
Q 019298           14 IITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRD   93 (343)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~   93 (343)
                      ...++.++..+...-++ +..+++|.|++|+|+.++.+.+.++..+|+.++++.+..++|.|+.|....|+++|+|+.+.
T Consensus        41 ~~tir~i~~~l~~~~~p-~~~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~  119 (447)
T KOG0259|consen   41 SVTIRGILSALFDCCDP-EKKKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRD  119 (447)
T ss_pred             cccHHHHHHHHhhcCCc-ccCceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcC
Confidence            55788888888887765 23458999999999999999999999999999999999999999999999999999999887


Q ss_pred             CCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCC
Q 019298           94 LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN  173 (343)
Q Consensus        94 ~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~  173 (343)
                      ..-.++++.|++|+|+++||+.++.+|.+||..|++|+|+|+-|...+...|++++++++.++.+|.+|++.+|..++++
T Consensus       120 l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DEN  199 (447)
T KOG0259|consen  120 LPNKLTADDVVLTSGCSQAIELAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADEN  199 (447)
T ss_pred             CCCccCcCceEEeccchHHHHHHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhccC
Confidence            77779999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCc
Q 019298          174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWR  253 (343)
Q Consensus       174 ~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r  253 (343)
                      |.++++.||+||+|.+++.+.|++|+++|+++++.+|.||+|.+++|++.++.++..+.....||.++|.||.|-.||||
T Consensus       200 T~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWR  279 (447)
T KOG0259|consen  200 TVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWR  279 (447)
T ss_pred             eeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCce
Confidence            99999999999999999999999999999999999999999999999999999999999888999999999999999999


Q ss_pred             EEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccch-hhHHHHH-HHHHHHHHHHHHHHhhcCCCCce-e
Q 019298          254 LGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLS-TIMQIMI-HGNFLENFAGSCVPSYKLIPELI-N  330 (343)
Q Consensus       254 ~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~-~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~-~  330 (343)
                      +||++.-|+..+.++...++.+++..+....++.+.|.|+ -.+|. .+.++.+ .+..++.+.+...+.|.++|++. .
T Consensus       280 lGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~Al-P~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp  358 (447)
T KOG0259|consen  280 LGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGAL-PDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCP  358 (447)
T ss_pred             eeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHh-HHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccC
Confidence            9999999999999898888999999888889999999999 55554 3556655 88899999999999999999999 7


Q ss_pred             eCCCCceEeeecC
Q 019298          331 FKSTGSSLKYLDL  343 (343)
Q Consensus       331 ~~~~~g~~~~~~l  343 (343)
                      ..|+|.+|+|+.+
T Consensus       359 ~kPeg~mylmv~l  371 (447)
T KOG0259|consen  359 VKPEGCMYLMVKL  371 (447)
T ss_pred             cCCCcceEEEecc
Confidence            8999999999874

>PLN02656 tyrosine transaminase

Probab=100.00  E-value=8.8e-51  Score=377.42  Aligned_cols=327  Identities=73%  Similarity=1.180  Sum_probs=280.9

Q ss_pred             cHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCC
Q 019298           16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLP   95 (343)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~   95 (343)
                      .+...++..+++.+++..+.++|+|++|+|+....+++++.+++++.+++......+|++..|.+++|+++++++++.+|
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g   91 (409)
T PLN02656         12 TIKGILSLLMESIDDEENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLP   91 (409)
T ss_pred             hhhhHHHHHHHhccccccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcC
Confidence            47777777777776667789999999999886556888999999999988876667899989999999999999998888


Q ss_pred             CCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCce
Q 019298           96 YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTV  175 (343)
Q Consensus        96 ~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~  175 (343)
                      ..+++++|++|+|+++++..++.+++++||+|++++|+|+.+...+...|.+++.+++.+++++.+|++.+++.++++++
T Consensus        92 ~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~  171 (409)
T PLN02656         92 YKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTV  171 (409)
T ss_pred             CCCCcccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCce
Confidence            88999999999999999999999999999999999999999988889999999999987667788999999999988899


Q ss_pred             EEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEE
Q 019298          176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG  255 (343)
Q Consensus       176 ~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G  255 (343)
                      ++++++||||||.+++.+++++|+++|+++++++|+||+|.++.|++....++..++...++|+++||||+|+++|+|+|
T Consensus       172 ~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG  251 (409)
T PLN02656        172 ALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLG  251 (409)
T ss_pred             EEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEE
Confidence            99999999999999999999999999999999999999999999877554455445555689999999999999999999


Q ss_pred             EEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHHHHhhcCCCCce-eeC
Q 019298          256 WFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSCVPSYKLIPELI-NFK  332 (343)
Q Consensus       256 ~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~-~~~  332 (343)
                      |++++++.....++++++++++......+++.+.|.++ ..+|.+ ...+++ .++.++++++.+.+.|+.++++. +..
T Consensus       252 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~-~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~  330 (409)
T PLN02656        252 WFVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAV-PTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHK  330 (409)
T ss_pred             EEEEeCcccccccHHHHHHHHHHHhhhcCCCHHHHHHH-HHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcC
Confidence            99997543332235788888876554456788899998 677753 345555 88899999999999999886654 458


Q ss_pred             CCCceEeeecC
Q 019298          333 STGSSLKYLDL  343 (343)
Q Consensus       333 ~~~g~~~~~~l  343 (343)
                      |+||+|+|+++
T Consensus       331 p~gg~~~w~~l  341 (409)
T PLN02656        331 PEGSMAVMVKL  341 (409)
T ss_pred             CCeEEEEEEec
Confidence            99999999875

>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional

Probab=100.00  E-value=1.2e-50  Score=377.63  Aligned_cols=326  Identities=53%  Similarity=0.960  Sum_probs=274.0

Q ss_pred             HHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCC
Q 019298           17 IKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY   96 (343)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~   96 (343)
                      ++..+............+.++|+|++|+|+.++.+++++.+.+++.++++....+.|++..|.+++|+++++++.+.++.
T Consensus        34 ~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~  113 (430)
T PLN00145         34 IRAVLNRVKACVDAGGGPRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPY  113 (430)
T ss_pred             hhhHHHHHHHhhhcccCCCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCC
Confidence            44444444333321112668999999999887778999999999999987766678999899999999999999988888


Q ss_pred             CCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceE
Q 019298           97 KLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA  176 (343)
Q Consensus        97 ~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~  176 (343)
                      .+++++|++|+|++++|..+++.+.++||+|++++|+|+.|...+...|.+++.+++.++++|.+|++.+++.+++++++
T Consensus       114 ~~~~~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~  193 (430)
T PLN00145        114 ELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENTVA  193 (430)
T ss_pred             CCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcCceE
Confidence            89999999999999999999999999999999999999999999999999999999877778999999999999889999


Q ss_pred             EEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEE
Q 019298          177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW  256 (343)
Q Consensus       177 i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~  256 (343)
                      +++++||||||.+++.+++++|+++|+++|+++|+||+|.++.|++....++..+....++|+++||||.|+++|+|+||
T Consensus       194 i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~  273 (430)
T PLN00145        194 MVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGW  273 (430)
T ss_pred             EEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEE
Confidence            99999999999999999999999999999999999999999998765555555566667899999999999999999999


Q ss_pred             EEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHHHHhhcCCCCcee-eCC
Q 019298          257 FVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSCVPSYKLIPELIN-FKS  333 (343)
Q Consensus       257 i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~-~~~  333 (343)
                      ++++++..+....++++.++.......+++.+.|.++ ..+|.+ ...+++ .++.++++++.+.+.|++++|+.+ ..|
T Consensus       274 iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P  352 (430)
T PLN00145        274 IATCDPNGILKETKVVDSIRNYLNISTDPATFVQGAI-PQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKP  352 (430)
T ss_pred             EEEecchhhhhhhHHHHHHHHHhcccCCCCHHHHHHH-HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCC
Confidence            9986544222111234455555554556788899998 667764 345555 889999999999999999888874 579


Q ss_pred             CCceEeeecC
Q 019298          334 TGSSLKYLDL  343 (343)
Q Consensus       334 ~~g~~~~~~l  343 (343)
                      +||+|+|+++
T Consensus       353 ~ga~y~~v~l  362 (430)
T PLN00145        353 EGSMFVMVKL  362 (430)
T ss_pred             CeeeEEEecc
Confidence            9999999874

>PLN02187 rooty/superroot1

Probab=100.00  E-value=4.6e-50  Score=376.18  Aligned_cols=324  Identities=46%  Similarity=0.844  Sum_probs=271.6

Q ss_pred             ccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhC
Q 019298           15 ITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL   94 (343)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~   94 (343)
                      .+++.+...+.+...+ ....++|+|++|+|+..+.+.+++.+.+++.+++..+....|++..|.++||+++|+|+++++
T Consensus        47 ~~~~~~~~~~~~~~~~-~~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~  125 (462)
T PLN02187         47 VTLRGVIYMLFDNCGK-DVNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDL  125 (462)
T ss_pred             chHhhHHHHHHhhccc-CCCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhc
Confidence            3677776666554322 347889999999988766678889999999998876666789998999999999999999888


Q ss_pred             CCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCc
Q 019298           95 PYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT  174 (343)
Q Consensus        95 ~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~  174 (343)
                      +.++++++|++|+|++++|..++++++++||.|++++|+|+.|...+...|.+++.+++.++++|.+|+++|++++++++
T Consensus       126 ~~~~~~~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~  205 (462)
T PLN02187        126 PHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENT  205 (462)
T ss_pred             CCCCCcccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCCc
Confidence            88999999999999999999999999999999999999999999999999999999998776789999999999988889


Q ss_pred             eEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE
Q 019298          175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL  254 (343)
Q Consensus       175 ~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~  254 (343)
                      +++++++||||||.+++.+++++|+++|++||+++|+||+|.++.|++..+.++..+....++|+++||||+|+++|+|+
T Consensus       206 ~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRi  285 (462)
T PLN02187        206 VAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKI  285 (462)
T ss_pred             EEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCcccee
Confidence            99999999999999999999999999999999999999999999987655445555555457999999999999999999


Q ss_pred             EEEEEeCCCCCCCchHHHHHHhhhhc---cccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHHHHhhcCCCCce
Q 019298          255 GWFVTTDPCGMFRKPKVVERMKKYFD---ILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSCVPSYKLIPELI  329 (343)
Q Consensus       255 G~i~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~  329 (343)
                      ||++++++..+.   ++++.+.....   ...+++.+.|.++ .++|.+ ...+++ .++.++++++.+.+.|++++++.
T Consensus       286 G~~v~~~p~~~~---~~~~~~~~~~~~~~~~~~~s~~~Q~a~-~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~  361 (462)
T PLN02187        286 GWIALNDPEGVF---ETTKVLQSIKQNLDVTPDPATIIQAAL-PAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVV  361 (462)
T ss_pred             EEEEecCchhHH---HHHHHHHHHHHhccccCCCCHHHHHHH-HHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCc
Confidence            999986533111   13345554433   2335578899998 777753 346666 88999999999999999986554


Q ss_pred             -eeCCCCceEeeecC
Q 019298          330 -NFKSTGSSLKYLDL  343 (343)
Q Consensus       330 -~~~~~~g~~~~~~l  343 (343)
                       +..|+||+|+|+++
T Consensus       362 ~~~~P~gg~fl~~~l  376 (462)
T PLN02187        362 CPKKPESCTYLLTKL  376 (462)
T ss_pred             CCCCCCEeEEEEeec
Confidence             45789999999863

>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]

Probab=100.00  E-value=2.6e-50  Score=351.17  Aligned_cols=290  Identities=26%  Similarity=0.371  Sum_probs=255.2

Q ss_pred             eccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEecChHHHHHHHHH
Q 019298           40 LAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMA  118 (343)
Q Consensus        40 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~al~~~~~  118 (343)
                      |+.|.|+    +++|+-+.+++++++.+...++|.+..|.++|++++++.++..+|....+ ++|++|.|+.++|..++.
T Consensus        36 LgqGfp~----~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~  111 (420)
T KOG0257|consen   36 LGQGFPD----FPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALL  111 (420)
T ss_pred             ccCCCCC----CCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHH
Confidence            9999965    88999999999999988888999999999999999999999988766555 579999999999999999


Q ss_pred             HhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecC------CCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298          119 LLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL------PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       119 ~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~  192 (343)
                      .++++||+|++++|.|..|....++.|...+.++..      ..++|.+|.+.++.++++++++|++|+||||||.++|+
T Consensus       112 ~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsR  191 (420)
T KOG0257|consen  112 GLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSR  191 (420)
T ss_pred             HHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCCCCCcCcccCH
Confidence            999999999999999999999999999999999987      45679999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC-CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  271 (343)
                      ++|++|+++|++||+++|.||+|..+.|++..+..+.+++ ..++++.++|+||+||+.|||+||++++        +.+
T Consensus       192 eeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp--------~~L  263 (420)
T KOG0257|consen  192 EELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGP--------KHL  263 (420)
T ss_pred             HHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeech--------HHh
Confidence            9999999999999999999999999999998776666663 4568999999999999999999999994        257


Q ss_pred             HHHHhhhhc-cccCcchHHHHHHHhccchh------h--HHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeee
Q 019298          272 VERMKKYFD-ILGDPATFIQVCIMYGCLST------I--MQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYL  341 (343)
Q Consensus       272 ~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~------~--~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~  341 (343)
                      ...++...+ ....++...|.|. .+++..      +  ..+.+ +.+.++++|+.+.+.|..+ |+++..|+|++|+|+
T Consensus       264 ~~~~~~vh~~~~~~~~Tp~q~A~-a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~v~~p~gayyl~a  341 (420)
T KOG0257|consen  264 YSALFPVHQNFVFTCPTPIQEAS-AAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL-GLKVTGPEGAYYLWA  341 (420)
T ss_pred             hhhHHHHhhccccccCcHHHHHH-HHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCceEEEE
Confidence            777776643 3445566666665 333321      1  15555 8999999999999999999 999999999999999


Q ss_pred             cC
Q 019298          342 DL  343 (343)
Q Consensus       342 ~l  343 (343)
                      ++
T Consensus       342 df  343 (420)
T KOG0257|consen  342 DF  343 (420)
T ss_pred             ec
Confidence            85

>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional

Probab=100.00  E-value=9.3e-50  Score=370.37  Aligned_cols=311  Identities=53%  Similarity=0.971  Sum_probs=261.1

Q ss_pred             ccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +.++++|+|++|+|+.+..+++++.+.+++.+++.......|+++.|.++||+++++|+.+++|.++++++|++|+|+++
T Consensus        29 ~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~  108 (409)
T PLN00143         29 DDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKH  108 (409)
T ss_pred             CCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHH
Confidence            44889999999998765568899999999999887766678999899999999999999988888899999999999999


Q ss_pred             HHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccC
Q 019298          112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS  191 (343)
Q Consensus       112 al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~  191 (343)
                      ++..++++++++||.|++++|+|+.|...+...|.+++.+++.++++|.+|+++|+++++.+++++++++||||||.+++
T Consensus       109 al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~nP~NPTG~~~s  188 (409)
T PLN00143        109 AAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAMVIINPGNPCGSVYS  188 (409)
T ss_pred             HHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCCEEEEEECCCCCCCCccC
Confidence            99999999999999999999999999999999999999999876678889999999988888899999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (343)
Q Consensus       192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  271 (343)
                      .+++++|+++|++|++++|+||+|.++.+++....++..+...+++|+++||||.|+++|+|+||++++++..+....+.
T Consensus       189 ~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~  268 (409)
T PLN00143        189 YEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEI  268 (409)
T ss_pred             HHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHH
Confidence            99999999999999999999999999998765444444455556899999999999999999999999654322100123


Q ss_pred             HHHHhhhhccccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHHHHhhcCCCCce-eeCCCCceEeeecC
Q 019298          272 VERMKKYFDILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSCVPSYKLIPELI-NFKSTGSSLKYLDL  343 (343)
Q Consensus       272 ~~~l~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~-~~~~~~g~~~~~~l  343 (343)
                      ++.+++.......++.+.|.++ ..+|.+ ...+++ .++.++++++.+.+.|+++++.. ...|+||+|+|+++
T Consensus       269 ~~~~~~~~~~~~~~~~~~q~a~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l  342 (409)
T PLN00143        269 ADSIKKALNPAPFPPTFIQAAI-PEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKL  342 (409)
T ss_pred             HHHHHHHHhccCCCCchHHHHH-HHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEec
Confidence            4444444432334577888888 666653 345655 88889999999999998885544 34789999999975

>PLN02368 alanine transaminase

Probab=100.00  E-value=5.5e-50  Score=368.89  Aligned_cols=331  Identities=21%  Similarity=0.346  Sum_probs=264.5

Q ss_pred             cccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCC-------CC-------------------CCCCcH
Q 019298            2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTV-------HS-------------------CFHTTH   55 (343)
Q Consensus         2 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-------~~-------------------~~~~~~   55 (343)
                      .+|+|..+++.+  ....+.....+-.   ..+.++|+|++|+|+.       +.                   .+.+++
T Consensus        10 ~~~~~~~~~~~~--~~~~~~~~a~~~~---~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~   84 (407)
T PLN02368         10 SLNENVKKCQYA--VRGELYLRASELQ---KEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPAD   84 (407)
T ss_pred             hcCHHHHhhhhh--cCCHHHHHHHHHH---HHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHH
Confidence            356777777776  3333332222211   2277999999999851       10                   012556


Q ss_pred             HHHHHHHHHHh-cCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc-CCCCeEEEeCCC
Q 019298           56 VATEAVAEALL-SEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RPGANILLPRPG  133 (343)
Q Consensus        56 ~~~~~~~~~~~-~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~~gd~vl~~~p~  133 (343)
                      .+.++++.... ......|+++.|.++||+++++|+.+++|..+++++|++|+|+++++..++.+++ ++||.|++++|+
T Consensus        85 ~i~~a~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~  164 (407)
T PLN02368         85 AIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQ  164 (407)
T ss_pred             HHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCC
Confidence            66666654322 2346689999999999999999999888888999999999999999999999987 799999999999


Q ss_pred             CcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCc
Q 019298          134 FPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT  207 (343)
Q Consensus       134 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~  207 (343)
                      |+.|...+...|.+++.++++.+++|.+|++.+++.+++      +++++++++||||||.+++.+++++|+++|++||+
T Consensus       165 Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~  244 (407)
T PLN02368        165 YPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERL  244 (407)
T ss_pred             CccHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCC
Confidence            999999999999999999998777899999999998864      57889999999999999999999999999999999


Q ss_pred             EEEEccCCCccccCCC-CCCccccc----C----CCCCEEEEccCcccc-CCCCCcEEEEEEeCCCCCCCchHHHHHHhh
Q 019298          208 LVIADEVYGHLVFGDK-PFVPMGVF----G----STVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKK  277 (343)
Q Consensus       208 ~~i~D~ay~~~~~~~~-~~~~~~~~----~----~~~~~i~~~S~sK~~-~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~  277 (343)
                      ++|+||+|.++.|++. .+.++..+    .    ..+++|+++||||+| +++|+|+||+++.+.     ++++++++.+
T Consensus       245 ~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~-----~~~li~~~~~  319 (407)
T PLN02368        245 VLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNI-----PPKTVEEIYK  319 (407)
T ss_pred             EEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCC-----CHHHHHHHHH
Confidence            9999999999998764 33333221    1    235899999999998 899999999986210     2468888887


Q ss_pred             hhccccCcchHHHHHHHhccchhhH-------HHHH----HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          278 YFDILGDPATFIQVCIMYGCLSTIM-------QIMI----HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       278 ~~~~~~~~~~~~~~a~~~~~l~~~~-------~~l~----~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      .....++++.++|.++ .++|..+.       .+.+    +++.++++|+.+.+.|+++||+.+..|+||||+|+++
T Consensus       320 ~~~~~~~~~~~~Q~aa-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i  395 (407)
T PLN02368        320 VASIALSPNVSGQIFM-GLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQI  395 (407)
T ss_pred             HhcccCCCCcHHHHHH-HHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCC
Confidence            7544567888999998 77776431       2332    6789999999999999999999988999999999764

>PRK07366 succinyldiaminopimelate transaminase; Validated

Probab=100.00  E-value=2e-49  Score=366.70  Aligned_cols=323  Identities=16%  Similarity=0.204  Sum_probs=263.6

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~   80 (343)
                      |++|+|...++..  ....+........   ..+.++++|+.|++.    +++++.+.+++++.+......+|+++.|.+
T Consensus         1 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~   71 (388)
T PRK07366          1 MQFAQRLQPLQSN--VFADMDRAKAQAR---AAGKELIDLSLGSSD----LPAPAHALEAIAQSLHDPSTHGYLLFHGTL   71 (388)
T ss_pred             CchhhhhhcCCcc--HHHHHHHHHHHHH---hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCcccCCCCCCCCCH
Confidence            5678887666544  3333333222211   236779999999954    777899999999887655556899989999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC
Q 019298           81 LTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW  159 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  159 (343)
                      +||+++++++.+.+|..++++ +|++|+|++++|..++++++++||+|++++|+|+.|...++..|.+++.+++++++++
T Consensus        72 ~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~  151 (388)
T PRK07366         72 DFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDF  151 (388)
T ss_pred             HHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCC
Confidence            999999999998889889998 6999999999999999999999999999999999999999999999999999877778


Q ss_pred             CCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCC-CCcccccCCC-CCE
Q 019298          160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP-FVPMGVFGST-VPI  237 (343)
Q Consensus       160 ~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~-~~~~~~~~~~-~~~  237 (343)
                      .+|++++++.+..+++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++.. ..++..++.. .++
T Consensus       152 ~~d~~~l~~~~~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~v  231 (388)
T PRK07366        152 LPVFADIPTEVLAQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVS  231 (388)
T ss_pred             CCCHHHHHHhhcccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccE
Confidence            89999998877777899999999999999999999999999999999999999999999887643 3444444332 478


Q ss_pred             EEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccc-cCc-chHHHHHHHhccchhhHHHHH-HHHHHHHH
Q 019298          238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDIL-GDP-ATFIQVCIMYGCLSTIMQIMI-HGNFLENF  314 (343)
Q Consensus       238 i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~-~~~-~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~  314 (343)
                      |+++||||+||++|+|+||++++        +++++++.+..... .+. +...+.++  ++|.+..++++ .++.++++
T Consensus       232 i~~~SfSK~~g~~GlRiG~~v~~--------~~li~~l~~~~~~~~~~~~~~~~~~a~--~~l~~~~~~l~~~~~~~~~~  301 (388)
T PRK07366        232 IEFFTLSKSYNMGGFRIGFAIGN--------AQLIQALRQVKAVVDFNQYRGILNGAI--AALTGPQATVQQTVQIFRQR  301 (388)
T ss_pred             EEEeecccccCCcchhheehcCC--------HHHHHHHHHHHhhcccCCCHHHHHHHH--HHHhCcHHHHHHHHHHHHHH
Confidence            99999999999999999999984        47888888775432 233 33334444  34433345665 89999999


Q ss_pred             HHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          315 AGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       315 ~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++.+.+.|+++ |+.+..|++|+|+|+++
T Consensus       302 r~~l~~~L~~~-~~~~~~p~~g~f~~~~~  329 (388)
T PRK07366        302 RDAFINALHQI-GWPVPLPEATMYVWAKL  329 (388)
T ss_pred             HHHHHHHHHHC-CCcccCCCeeEEEEEEC
Confidence            99999999988 78777899999999975

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional

Probab=100.00  E-value=2.6e-49  Score=377.16  Aligned_cols=332  Identities=20%  Similarity=0.353  Sum_probs=269.0

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~   80 (343)
                      |++|+|..+..++  .+..+.....+-.   ..+.++|+|++|+|+.+ .+++++.+.+++.+++..  ..+|++..|.+
T Consensus       117 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~g~~~i~l~~G~p~~~-~~~~p~~~~~~~~~~~~~--~~~Y~~~~G~~  188 (517)
T PRK13355        117 FKKSHKLDNVLYD--VRGPVVDEANRME---AAGTHILKLNIGNPAPF-GFRTPDEVVYDMAQQLTD--TEGYSDSKGLF  188 (517)
T ss_pred             CChhHHhhccCcc--HHHHHHHHHHHHH---HcCCCeEEecCcCCCcC-CCCCCHHHHHHHHHHhhc--CCCCCCCcChH
Confidence            3467787777776  4444544443332   23778999999998643 266788999999888753  35799999999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (343)
                      +||++|++++.++++..+++++|++|+|++++|..++.+++++||+|++++|+|+.|...++..|.+++.++++++++|.
T Consensus       189 ~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~  268 (517)
T PRK13355        189 SARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWY  268 (517)
T ss_pred             HHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCC
Confidence            99999999998766667899999999999999999999999999999999999999999999999999999988777899


Q ss_pred             CCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEE
Q 019298          161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL  240 (343)
Q Consensus       161 ~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~  240 (343)
                      +|+++++++++++++++++++||||||.+++.+++++|+++|++||+++|+||+|..+.|++....++..+.....++++
T Consensus       269 ~d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~  348 (517)
T PRK13355        269 PDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTF  348 (517)
T ss_pred             CCHHHHHHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEE
Confidence            99999999998899999999999999999999999999999999999999999999999877555555555444457889


Q ss_pred             ccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhh---HHHHHHHHHHHHHHHH
Q 019298          241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTI---MQIMIHGNFLENFAGS  317 (343)
Q Consensus       241 ~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~---~~~l~~~~~~~~~~~~  317 (343)
                      +||||+|+++|+|+||++++.+..+.  .++++.+........+.+.++|.++ ..+|...   .++++..+++.++|+.
T Consensus       349 ~S~SK~~~~~G~RiG~~i~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~q~a~-~~aL~~~~~~~~~~~~~~~~~~~r~~  425 (517)
T PRK13355        349 SGLSKSHMIAGYRIGWMILSGNKRIA--KDYIEGLNMLANMRLCSNVPAQSIV-QTALGGHQSVKDYLVPGGRVYEQREL  425 (517)
T ss_pred             ecchhhccCcccceEEEEeeCchhhH--HHHHHHHHHHhcCcCCcChHHHHHH-HHHhcCCccHHHHHHHHHHHHHHHHH
Confidence            99999999999999999975322110  1245555444443456788889888 6666532   3444434456677899


Q ss_pred             HHHhhcCCCCceeeCCCCceEeeecC
Q 019298          318 CVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       318 ~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +.+.|+++||+.+..|+||+|+|+++
T Consensus       426 l~~~L~~~~g~~~~~p~g~fy~~~~l  451 (517)
T PRK13355        426 VYNALNAIPGISAVKPKAAFYIFPKI  451 (517)
T ss_pred             HHHHHhcCCCcccCCCCeeeEEEeec
Confidence            99999999899988999999999764

>PRK07681 aspartate aminotransferase; Provisional

Probab=100.00  E-value=7.9e-49  Score=363.72  Aligned_cols=323  Identities=17%  Similarity=0.262  Sum_probs=270.0

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~   80 (343)
                      |++++|.....++  .+..+.....+..   ..+.+.++|+.|.|+    +++++.+.+++.+.+.......|++ .|.+
T Consensus         3 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~y~~-~G~~   72 (399)
T PRK07681          3 YTLATRMKAFQSS--IFSELGAYKKEKI---AAGHKMIDLSIGNPD----MPPADFVREEMVHTANQKESYGYTL-SGIQ   72 (399)
T ss_pred             ccHhHHHhhcCcc--HHHHHHHHHHHhh---hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhccccCCCCC-CCcH
Confidence            4566666665655  4555544433322   236788999999965    6678889999988876543445654 7999


Q ss_pred             HHHHHHHHHHhhhCCCCCCC-CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC
Q 019298           81 LTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW  159 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  159 (343)
                      +||+++++|+.+++|..+++ ++|++|+|+++++..++.+++++||.|++++|+|+.|...++..|.+++.++++++++|
T Consensus        73 ~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~  152 (399)
T PRK07681         73 EFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDF  152 (399)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCC
Confidence            99999999999888988998 89999999999999999999999999999999999999999999999999999777778


Q ss_pred             CCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEE
Q 019298          160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPIL  238 (343)
Q Consensus       160 ~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i  238 (343)
                      .+|++++++.+.++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..++. .+++|
T Consensus       153 ~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i  232 (399)
T PRK07681        153 LPDLELIPEEIADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGV  232 (399)
T ss_pred             cCCHHHHHHhccccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEE
Confidence            89999999988778899999999999999999999999999999999999999999999887655444444443 35799


Q ss_pred             EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHH
Q 019298          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAG  316 (343)
Q Consensus       239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~  316 (343)
                      +++||||+|+++|+|+||++++        +++++++..... ..++++.+.|.++ ..+|.+...+++ .++.++++++
T Consensus       233 ~~~S~SK~~~~~GlRiG~~i~~--------~~l~~~~~~~~~~~~~~~s~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~  303 (399)
T PRK07681        233 EINSLSKSYSLAGSRIGYMIGN--------EEIVRALTQFKSNTDYGVFLPIQKAA-CAALRNGAAFCEKNRGIYQERRD  303 (399)
T ss_pred             EEeecccccCCccceeEEEecC--------HHHHHHHHHHHhhcccCCCHHHHHHH-HHHHhCcHHHHHHHHHHHHHHHH
Confidence            9999999999999999999984        468888887754 3457888889888 777776556665 7888999999


Q ss_pred             HHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          317 SCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       317 ~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      .+.+.|+++ |+.+..|++|+|+|+++
T Consensus       304 ~l~~~L~~~-g~~~~~p~~g~f~~~~l  329 (399)
T PRK07681        304 TLVDGFRTF-GWNVDKPAGSMFVWAEI  329 (399)
T ss_pred             HHHHHHHHC-CCcccCCCeeeEEEEEC
Confidence            999999988 78877899999999975

>PRK06207 aspartate aminotransferase; Provisional

Probab=100.00  E-value=9.2e-49  Score=363.24  Aligned_cols=328  Identities=20%  Similarity=0.247  Sum_probs=270.7

Q ss_pred             ccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHH
Q 019298            3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT   82 (343)
Q Consensus         3 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~l   82 (343)
                      +.+-+++..|.+. +++-..-+..-.+-+.-+.+.++|+.|.|+   ..++++.+.+++.+++......+|++..|.++|
T Consensus         8 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~---~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~L   83 (405)
T PRK06207          8 FARLGTDNAPGQE-VRQSAAGLEALLRGEPLPGRPVDFSHGDVD---AHEPTPGAFELFSAGVERGGVQAYTEYRGDADI   83 (405)
T ss_pred             HHHhCCCCCCcHH-HHhhhhhhhhhhcCCcCCCCceecCCcCCC---CCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHH
Confidence            4566777777653 444443333333222337788999999976   245678888888888765555689999999999


Q ss_pred             HHHHHHHHhhhCCCCCCC-CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecC---CCCC
Q 019298           83 RRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL---PDKG  158 (343)
Q Consensus        83 r~~ia~~~~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~---~~~~  158 (343)
                      |+++++++.+.+|..+++ ++|++|+|+++++..++++++++||+|++++|+|+.+...++..|.+++.++++   ++++
T Consensus        84 R~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~  163 (405)
T PRK06207         84 RELLAARLAAFTGAPVDAADELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKR  163 (405)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccC
Confidence            999999999988988888 899999999999999999999999999999999999999999999999999875   3346


Q ss_pred             CCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC-CCCCE
Q 019298          159 WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPI  237 (343)
Q Consensus       159 ~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~-~~~~~  237 (343)
                      +++|+++|+++++++++++++++||||||.+++.+++++|+++|++||+++|+||+|..+.+++..+.++..+. ..+++
T Consensus       164 ~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~v  243 (405)
T PRK06207        164 AGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENV  243 (405)
T ss_pred             CCcCHHHHHHhhhhcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcE
Confidence            88999999999888899999999999999999999999999999999999999999999998765444444332 24689


Q ss_pred             EEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHH
Q 019298          238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFA  315 (343)
Q Consensus       238 i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~  315 (343)
                      ++++||||+|+++|+|+||++++        ++++++++..... ..+.+.+.|.++ ..+|.+...+++ .++.+++++
T Consensus       244 i~i~SfSK~~~lpGlRiG~ii~~--------~~l~~~~~~~~~~~~~~~~~~~q~a~-~~~l~~~~~~~~~~~~~~~~~r  314 (405)
T PRK06207        244 ITIMGPSKTESLSGYRLGVAFGS--------PAIIDRMEKLQAIVSLRAAGYSQAVL-RTWFSEPDGWMKDRIARHQAIR  314 (405)
T ss_pred             EEEecchhhccCcccceEEEEcC--------HHHHHHHHHHHhHhccCCCHHHHHHH-HHHHhCcHHHHHHHHHHHHHHH
Confidence            99999999999999999999985        4688888877543 345677888888 777765445554 777888889


Q ss_pred             HHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          316 GSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       316 ~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +.+.+.|++++++.+..|++|+|+|+++
T Consensus       315 ~~l~~~L~~~~~~~~~~p~gg~fl~~~l  342 (405)
T PRK06207        315 DDLLRVLRGVEGVFVRAPQAGSYLFPRL  342 (405)
T ss_pred             HHHHHHHhcCCCceecCCCeeEEEEEeC
Confidence            9999999888788887899999999975

>PRK08068 transaminase; Reviewed

Probab=100.00  E-value=2.2e-48  Score=359.68  Aligned_cols=323  Identities=22%  Similarity=0.286  Sum_probs=265.3

Q ss_pred             cccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHH
Q 019298            2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPL   81 (343)
Q Consensus         2 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~   81 (343)
                      ++|++..+..++  .+..+.....+..   ..+.+.++|+.|.|+    ++.++.+.+++.+++.......|++..|.++
T Consensus         4 ~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~   74 (389)
T PRK08068          4 EPSELLKQLPKQ--FFASLVAKVNKKV---AEGHDVINLGQGNPD----QPTPEHIVEALQEAAENPANHKYSPFRGYPF   74 (389)
T ss_pred             chhhHhhhcCcc--HHHHHHHHHHHHH---hcCCCeEEecCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHH
Confidence            456666665655  5555555443222   225678999999865    5566788999988877655678998899999


Q ss_pred             HHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298           82 TRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (343)
Q Consensus        82 lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (343)
                      ||+++++++.+.+|..++++ +|++|+|+++++..++..++++||+|++++|+|..|...++..|.+++.++++.++++.
T Consensus        75 lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~  154 (389)
T PRK08068         75 LKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFL  154 (389)
T ss_pred             HHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCC
Confidence            99999999998888889998 89999999999999999999999999999999999999999999999999987666788


Q ss_pred             CCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccc-cCCCCCEEE
Q 019298          161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV-FGSTVPILT  239 (343)
Q Consensus       161 ~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~-~~~~~~~i~  239 (343)
                      +|++++++.++++++++++++||||||.++|.+++++|+++|+++++++|+||+|.++.+++..+.++.. .+..+++++
T Consensus       155 ~d~~~l~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~  234 (389)
T PRK08068        155 PDYTKIPEEVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIE  234 (389)
T ss_pred             CCHHHHHHhccccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEE
Confidence            9999999988778899999999999999999999999999999999999999999998886533333222 233458899


Q ss_pred             EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHH
Q 019298          240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGS  317 (343)
Q Consensus       240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~  317 (343)
                      ++||||+||++|+|+||++++        +++++++.+.... ..+.++..|.++ ..++.+..++++ .++.++++++.
T Consensus       235 ~~S~SK~~g~~GlRiG~~~~~--------~~l~~~l~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~r~~  305 (389)
T PRK08068        235 LYTLSKTFNMAGWRVAFAVGN--------ESVIEAINLLQDHLFVSLFGAIQDAA-IEALLSDQSCVAELVARYESRRNA  305 (389)
T ss_pred             EecchhccCCccceeEeEecC--------HHHHHHHHHHHhhccCCCChHHHHHH-HHHHhCcHHHHHHHHHHHHHHHHH
Confidence            999999999999999999974        4788888877543 335555667776 444443345555 89999999999


Q ss_pred             HHHhhcCCCCceeeCCCCceEeeecC
Q 019298          318 CVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       318 ~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +.+.|+.+ |+.+..|+||+|+|+++
T Consensus       306 ~~~~L~~~-g~~~~~~~g~~~~~v~~  330 (389)
T PRK08068        306 FISACREI-GWEVDAPKGSFFAWMPV  330 (389)
T ss_pred             HHHHHHHC-CCcccCCCeeEEEEEEC
Confidence            99999998 78877889999999874

>PLN00175 aminotransferase family protein; Provisional

Probab=100.00  E-value=3.9e-48  Score=359.52  Aligned_cols=315  Identities=24%  Similarity=0.386  Sum_probs=266.0

Q ss_pred             cccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHH
Q 019298            2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPL   81 (343)
Q Consensus         2 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~   81 (343)
                      .+++|....+.+  .+..+....   .     ..+.|+|+.|.|+    +++++.+.+++.+++.+. ...|+++.|.++
T Consensus        31 ~~~~~~~~~~~~--~~~~~~~~~---~-----~~~~i~l~~G~P~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~   95 (413)
T PLN00175         31 QVAKRLEKFKTT--IFTQMSSLA---I-----KHGAINLGQGFPN----FDGPDFVKEAAIQAIRDG-KNQYARGFGVPE   95 (413)
T ss_pred             chhHHhhcCCCC--HHHHHHHHh---h-----cCCeEecCCCCCC----CCCCHHHHHHHHHHHhcC-CCCcCCCCCCHH
Confidence            345555555544  444433321   1     3478999999975    567888999999888763 468999999999


Q ss_pred             HHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298           82 TRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (343)
Q Consensus        82 lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (343)
                      ||+++++++++++|..++++ +|++|+|+++++..++.+++++||+|++++|+|..|...++..|.+++.+++++++ +.
T Consensus        96 Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~-~~  174 (413)
T PLN00175         96 LNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPD-FA  174 (413)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCccc-CC
Confidence            99999999998888888987 79999999999999999999999999999999999999999999999999987543 78


Q ss_pred             CCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEE
Q 019298          161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILT  239 (343)
Q Consensus       161 ~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~  239 (343)
                      +|++.|++.+.++++++++++||||||.+++.+++++|+++|++|++++|+||+|..+.+++. ..++..+.. .+++|+
T Consensus       175 ~~~~~l~~~~~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~-~~s~~~~~~~~~~vi~  253 (413)
T PLN00175        175 VPEDELKAAFTSKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGD-HISMASLPGMYERTVT  253 (413)
T ss_pred             CCHHHHHHhcCcCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCc-ccChhhCCCCcCcEEE
Confidence            999999999988899999999999999999999999999999999999999999999988653 234444433 468999


Q ss_pred             EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHH
Q 019298          240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGS  317 (343)
Q Consensus       240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~  317 (343)
                      ++||||.|+++|+|+||++++        +++++.+..... ...+++.+.|.++ ..+|.+...+++ .++.++++++.
T Consensus       254 i~SfSK~~~~~G~RiG~~v~~--------~~l~~~l~~~~~~~~~~~s~~~Q~a~-~~~l~~~~~~~~~~~~~~~~~~~~  324 (413)
T PLN00175        254 MNSLGKTFSLTGWKIGWAIAP--------PHLTWGVRQAHSFLTFATATPMQWAA-VAALRAPESYYEELKRDYSAKKDI  324 (413)
T ss_pred             EecchhhccCcchheeeeEeC--------HHHHHHHHHHHhhccCCCCHHHHHHH-HHHHhCCHHHHHHHHHHHHHHHHH
Confidence            999999999999999999985        368888877754 3568888999998 777776555655 88999999999


Q ss_pred             HHHhhcCCCCceeeCCCCceEeeecC
Q 019298          318 CVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       318 ~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +.+.|+++ |+.+..|+||+|+|+++
T Consensus       325 l~~~L~~~-g~~~~~p~g~~f~~~~~  349 (413)
T PLN00175        325 LVEGLKEV-GFKVYPSSGTYFVMVDH  349 (413)
T ss_pred             HHHHHHHC-CCeecCCCeeEEEEEec
Confidence            99999998 78888899999999874

>PTZ00433 tyrosine aminotransferase; Provisional

Probab=100.00  E-value=5.7e-48  Score=359.09  Aligned_cols=321  Identities=33%  Similarity=0.555  Sum_probs=267.8

Q ss_pred             cHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhC-
Q 019298           16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL-   94 (343)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~-   94 (343)
                      ++......+....    .++++|+|+.|.|+..+.+.+++.+.+++.+.+.......|+++.|.++||+++++++++++ 
T Consensus        18 ~~~~~~~~~~~~~----~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~   93 (412)
T PTZ00433         18 PLRTVTDNAKPSP----SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFV   93 (412)
T ss_pred             cHHHHHHhhccCC----CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhcc
Confidence            4555555554432    37899999999987433356789999999998876556789998999999999999998754 


Q ss_pred             -----CCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhh
Q 019298           95 -----PYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL  169 (343)
Q Consensus        95 -----~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~  169 (343)
                           +..+++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.+++++++++++|++++++.
T Consensus        94 ~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~  173 (412)
T PTZ00433         94 HKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRL  173 (412)
T ss_pred             ccccccCCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHH
Confidence                 466889999999999999999999999999999999999999999999999999999987767789999999998


Q ss_pred             hcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCC
Q 019298          170 ADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV  249 (343)
Q Consensus       170 ~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~  249 (343)
                      ++++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+....++|+++||||.|++
T Consensus       174 ~~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~  253 (412)
T PTZ00433        174 VDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVV  253 (412)
T ss_pred             hccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCC
Confidence            88889999999999999999999999999999999999999999999998876544455555544568999999999999


Q ss_pred             CCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHHHHhhcCCCC
Q 019298          250 PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSCVPSYKLIPE  327 (343)
Q Consensus       250 ~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~~~~L~~~~g  327 (343)
                      +|+|+||++++++...  .+++++.+++.....++++.+.|.++ ..++.+ ...+++ .++.++++++.+.+.|+.+.|
T Consensus       254 pGlRlG~~i~~~p~~~--~~~~~~~~~~~~~~~~~~~~~~q~a~-~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~  330 (412)
T PTZ00433        254 PGWRLGWLLLVDPHGN--GGDFLDGMKRLGMLVCGPCSVVQAAL-GEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIG  330 (412)
T ss_pred             CCeeEEEEEEeCCccc--HHHHHHHHHHHhhccCCCChHHHHHH-HHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            9999999998543211  13577777766543457888999888 555553 355666 888999999999999998667


Q ss_pred             ceeeCCCCceEeeecC
Q 019298          328 LINFKSTGSSLKYLDL  343 (343)
Q Consensus       328 ~~~~~~~~g~~~~~~l  343 (343)
                      +.+..|++|+|+|+++
T Consensus       331 ~~~~~p~gg~f~~~~l  346 (412)
T PTZ00433        331 LSPTMPRGSMFLMSRL  346 (412)
T ss_pred             CcccCCCeeEEEEEEe
Confidence            8877899999999864

>PRK09276 LL-diaminopimelate aminotransferase; Provisional

Probab=100.00  E-value=6e-48  Score=356.54  Aligned_cols=324  Identities=20%  Similarity=0.307  Sum_probs=267.5

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~   80 (343)
                      |++++|.....++  ....+.....+..   ..+.+.++|+.|+|.    +++++.+.+++.+++.......|+++.|.+
T Consensus         2 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~   72 (385)
T PRK09276          2 MKLADRIKNLPPY--LFAEIDKKKAEKI---ARGVDVISLGIGDPD----LPTPDHIIEAMCKAVEDPENHQYPSYEGML   72 (385)
T ss_pred             cchhhHhhhCCcc--HHHHHHHHHHHHH---hcCCCEEEecCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcH
Confidence            4566666665555  3444444332221   125678999999854    667888999999887655567899999999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC
Q 019298           81 LTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW  159 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  159 (343)
                      +||+++++|+++.+|..++++ +|++|+|+++++..+++.++++||+|++++|+|+.|...++..|.+++.++++.++++
T Consensus        73 ~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~  152 (385)
T PRK09276         73 EFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGF  152 (385)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCC
Confidence            999999999998888888887 5999999999999999999999999999999999999999999999999998766678


Q ss_pred             CCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEE
Q 019298          160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPIL  238 (343)
Q Consensus       160 ~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i  238 (343)
                      .+|++++++.+.++++++++++||||||.+++.+++++|+++|++|++++|+||+|..+.+++....++..++. .+++|
T Consensus       153 ~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i  232 (385)
T PRK09276        153 LPDLDAIPEDVAKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGI  232 (385)
T ss_pred             cCCHHHHHHhccccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEE
Confidence            89999999888878999999999999999999999999999999999999999999999887655555544443 35789


Q ss_pred             EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHH
Q 019298          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAG  316 (343)
Q Consensus       239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~  316 (343)
                      +++||||.||++|+|+||++++        +++++++++... ...+++...|.++ ..+|.+...+++ .+++++++++
T Consensus       233 ~~~S~SK~~g~~GlRiG~~i~~--------~~l~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~  303 (385)
T PRK09276        233 EFHSLSKTYNMTGWRIGFAVGN--------ADLIAGLGKVKSNVDSGVFQAIQEAG-IAALNGPQEVVEELRKIYQERRD  303 (385)
T ss_pred             EEecchhhcCCcchhheeeeCC--------HHHHHHHHHHHhhccCCCCHHHHHHH-HHHHcCcHHHHHHHHHHHHHHHH
Confidence            9999999999999999999985        368888877654 2345566777777 566654455655 8888999999


Q ss_pred             HHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          317 SCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       317 ~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      .+.+.|+++ |+.+..|++|+|+|+++
T Consensus       304 ~l~~~L~~~-~~~~~~~~~~~~~~v~~  329 (385)
T PRK09276        304 ILVEGLRKL-GLEVEPPKATFYVWAPV  329 (385)
T ss_pred             HHHHHHHhC-CCcccCCCcceEEEEEC
Confidence            999999998 78887899999999975

>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase

Probab=100.00  E-value=1.3e-47  Score=354.07  Aligned_cols=323  Identities=20%  Similarity=0.305  Sum_probs=267.9

Q ss_pred             cccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHH
Q 019298            2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPL   81 (343)
Q Consensus         2 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~   81 (343)
                      ++++|..+...+  .+..+.....+-.   ..++++++|+.|+|.    +++++.+.+++.+.+......+|+++.|.++
T Consensus         1 ~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~   71 (383)
T TIGR03540         1 KLADRIENLPPY--LFAEIDKKKAEKK---AEGVDVISLGIGDPD----LPTPKHIVEALCKAAENPENHRYPSYEGMLA   71 (383)
T ss_pred             CcchhhccCChh--HHHHHHHHHHHHH---hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHH
Confidence            356666665544  3333333322111   236788999999964    6678889999988876555678999999999


Q ss_pred             HHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298           82 TRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (343)
Q Consensus        82 lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (343)
                      ||+++++|+++.+|..++++ +|++|+|+++++..+++.++++||+|++++|+|+.+...++..|.++..++++.++++.
T Consensus        72 lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~  151 (383)
T TIGR03540        72 YRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFL  151 (383)
T ss_pred             HHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCc
Confidence            99999999998888888876 69999999999999999999999999999999999999999999999999987767788


Q ss_pred             CCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEE
Q 019298          161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILT  239 (343)
Q Consensus       161 ~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~  239 (343)
                      +|++++++.+.++++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+.+....++..++. .+++++
T Consensus       152 ~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~  231 (383)
T TIGR03540       152 PDFDAIPEDIAKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIE  231 (383)
T ss_pred             cCHHHHHhhccccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEE
Confidence            9999999988888999999999999999999999999999999999999999999999887655555544443 357899


Q ss_pred             EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHH
Q 019298          240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGS  317 (343)
Q Consensus       240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~  317 (343)
                      ++||||.||++|+|+||++++        +++++++..... ...+++.+.|.++ ..++.+..++++ .++.++++++.
T Consensus       232 ~~SfSK~~g~~GlRiG~~i~~--------~~l~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~  302 (383)
T TIGR03540       232 FHSLSKTYNMTGWRIGMAVGN--------ADLIAGLGKVKTNVDSGVFQAIQYAA-IAALNGPQDVVKEIRKIYQRRRDL  302 (383)
T ss_pred             EEecccccCCccceeeEEeCC--------HHHHHHHHHHHHhcccCCChHHHHHH-HHHHhCCHHHHHHHHHHHHHHHHH
Confidence            999999999999999999884        468888876653 2346677788887 677776566665 78899999999


Q ss_pred             HHHhhcCCCCceeeCCCCceEeeecC
Q 019298          318 CVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       318 ~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +.+.|+++ |+.+..|++|+|+|+++
T Consensus       303 ~~~~L~~~-~~~~~~~~~~~~~~~~l  327 (383)
T TIGR03540       303 LLEALKKI-GIDVEKPKATFYVWVPV  327 (383)
T ss_pred             HHHHHHhC-CCEecCCCcceEEEEEC
Confidence            99999998 88887899999999874

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.

>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic

Probab=100.00  E-value=9.9e-48  Score=356.72  Aligned_cols=321  Identities=38%  Similarity=0.684  Sum_probs=265.5

Q ss_pred             cHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCC
Q 019298           16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLP   95 (343)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~   95 (343)
                      ++.++.........   .++++++|+.|.|+.+..+++++.+.+++.+.+.......|++..|.++||+++++++.+ .+
T Consensus        15 ~~~~~~~~~~~~~~---~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~-~~   90 (401)
T TIGR01264        15 PIRAIVDNMKVKPN---PEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHN-PD   90 (401)
T ss_pred             HHHHHHHHHHhhhh---cCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhh-cC
Confidence            45555554444332   246789999999864445788999999999988765566899889999999999999987 45


Q ss_pred             CCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCce
Q 019298           96 YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTV  175 (343)
Q Consensus        96 ~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~  175 (343)
                      ..+++++|++|+|+++++..++.+++++||+|++++|+|..|...++..|.+++.++++.++++++|++.+++.++++++
T Consensus        91 ~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~  170 (401)
T TIGR01264        91 GPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKTA  170 (401)
T ss_pred             CCCCHHHEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccCce
Confidence            56889999999999999999999999999999999999999999999999999999887666788999999998887889


Q ss_pred             EEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEE
Q 019298          176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG  255 (343)
Q Consensus       176 ~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G  255 (343)
                      ++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+....++|+++||||+|+++|+|+|
T Consensus       171 ~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG  250 (401)
T TIGR01264       171 ALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLG  250 (401)
T ss_pred             EEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEE
Confidence            99999999999999999999999999999999999999999998876544555555554569999999999999999999


Q ss_pred             EEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298          256 WFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSCVPSYKLIPELINFKS  333 (343)
Q Consensus       256 ~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~  333 (343)
                      |++++++....  .++++.++......++++.+.|.++ ..+|.+ ...+++ .++.++++++.+.+.|+.++|+.+..|
T Consensus       251 ~iv~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~q~a~-~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p  327 (401)
T TIGR01264       251 WIIIHDRRGIL--RDIRDGLVKLSQRILGPCTIVQGAL-PSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMP  327 (401)
T ss_pred             EEEecCcchhH--HHHHHHHHHHhhccCCCCcHHHHHH-HHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCC
Confidence            99987532111  2355555555433456788889888 666653 345665 889999999999999999888877789


Q ss_pred             CCceEeeecC
Q 019298          334 TGSSLKYLDL  343 (343)
Q Consensus       334 ~~g~~~~~~l  343 (343)
                      ++|+|+|+++
T Consensus       328 ~~g~f~~~~~  337 (401)
T TIGR01264       328 SGAMYMMVGI  337 (401)
T ss_pred             CeeeEEEEEe
Confidence            9999999974

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.

>PRK09148 aminotransferase; Validated

Probab=100.00  E-value=1.2e-47  Score=355.99  Aligned_cols=324  Identities=20%  Similarity=0.294  Sum_probs=264.5

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~   80 (343)
                      |+.|+|.....+.  ....+... ....+  ..+.+.++|+.|.|+    +++++.+.+++.+.+......+|+++.|.+
T Consensus         1 ~~~~~~~~~~~~~--~~~~~~~~-~~~~~--~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~   71 (405)
T PRK09148          1 MEEFHRIRRLPPY--VFEQVNRL-KAAAR--AAGADIIDLGMGNPD----LPTPQHIVDKLCETAQDPRTHRYSASKGIP   71 (405)
T ss_pred             CcchhhhhcCCcc--HHHHHHHH-HHHHH--hcCCCeEEcCCCCCC----CCCCHHHHHHHHHHHcCcccCCCCCCCCCH
Confidence            6677887777755  44444332 22222  236788999999864    566788888888877554567899999999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC
Q 019298           81 LTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW  159 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  159 (343)
                      +||+++++++++++|..++++ +|++|+|++++|..+++.++++||+|++++|+|+.+...+...|.+++.++++.++.+
T Consensus        72 ~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~  151 (405)
T PRK09148         72 GLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEF  151 (405)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCC
Confidence            999999999998888888887 8999999999999999999999999999999999999999999999999998765555


Q ss_pred             CCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEE
Q 019298          160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPIL  238 (343)
Q Consensus       160 ~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i  238 (343)
                      ..++++..+....+++++++++||||||.+++.+++++|+++|++|++++|+||+|..+.+++....++..++. .++++
T Consensus       152 ~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i  231 (405)
T PRK09148        152 FPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTV  231 (405)
T ss_pred             ccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEE
Confidence            44555544444457889999999999999999999999999999999999999999999887644444444432 34688


Q ss_pred             EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHH
Q 019298          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAG  316 (343)
Q Consensus       239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~  316 (343)
                      +++||||.|+++|+|+||++++        +++++++.+.... ..+++.+.|.++ ..+|++...+++ .++.++++++
T Consensus       232 ~~~SfSK~~~~pGlR~G~~v~~--------~~~i~~l~~~~~~~~~~~~~~~q~~~-~~~L~~~~~~~~~~~~~~~~~r~  302 (405)
T PRK09148        232 EFTSMSKTFSMAGWRMGFAVGN--------ERLIAALTRVKSYLDYGAFTPIQVAA-TAALNGPQDCIAEMRELYKKRRD  302 (405)
T ss_pred             EEeccccccCCcchheeeeeCC--------HHHHHHHHHHHHHhccCCChHHHHHH-HHHHhCcHHHHHHHHHHHHHHHH
Confidence            9999999999999999999984        4788888877643 456778889888 677776556666 7889999999


Q ss_pred             HHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          317 SCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       317 ~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      .+.+.|+++ |+.+..|++|+|+|+++
T Consensus       303 ~l~~~L~~~-~~~~~~p~~g~f~~~~l  328 (405)
T PRK09148        303 VLVESFGRA-GWDIPPPAASMFAWAPI  328 (405)
T ss_pred             HHHHHHHHc-CCccCCCCeeEEEEEEC
Confidence            999999987 78777899999999874

>PRK06855 aminotransferase; Validated

Probab=100.00  E-value=1.1e-47  Score=358.57  Aligned_cols=304  Identities=25%  Similarity=0.374  Sum_probs=251.7

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      +.++++|++|+|..+ .+++++.+.+++.+.+......+|++..|.++||+++++|+++++|..+++++|++|+|++++|
T Consensus        31 g~~~~~~~~G~p~~~-~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al  109 (433)
T PRK06855         31 GVKITWENIGDPIAK-GEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAI  109 (433)
T ss_pred             cccccccccCCCccc-CCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHH
Confidence            667899999997531 4788999999999887655566899999999999999999999889999999999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHH-HhcCceeEEeecCCCCCCCCCHHHHHhhhc--CCceEEEEeCCCCCccccc
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSA-AFRHIEVRHFDLLPDKGWEVDLDDIESLAD--QNTVALVIINPGNPCGNVY  190 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--~~~~~i~~~~p~nptG~~~  190 (343)
                      ..++. ++++||.|++++|+|+.|.... ...|.+++.++++++++|.+|+++|+++++  ++++++++++||||||.++
T Consensus       110 ~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~  188 (433)
T PRK06855        110 AKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVY  188 (433)
T ss_pred             HHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCC
Confidence            99985 7889999999999999876543 345888888888777788999999999886  3568899999999999999


Q ss_pred             CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCch-
Q 019298          191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP-  269 (343)
Q Consensus       191 ~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~-  269 (343)
                      |.+++++|+++|++||++||+||+|..+.|++..+.++..+....++|+++||||.|+++|+|+||+++++...   ++ 
T Consensus       189 s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~---~~~  265 (433)
T PRK06855        189 PKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADK---DEV  265 (433)
T ss_pred             CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCch---hhH
Confidence            99999999999999999999999999999876555555555444468999999999999999999999854210   11 


Q ss_pred             --HHHHHHhhhhccccCcchHHHHHHHhccchhh--HHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          270 --KVVERMKKYFDILGDPATFIQVCIMYGCLSTI--MQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       270 --~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~--~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                        .+++.+........+++.+.|.++ ..++.+.  ..+++ .++.++++++.+.+.|+.++|+.+..|+||+|+|+++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~Q~a~-~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~w~~l  343 (433)
T PRK06855        266 FKKYINSILNAKMIEVCSTTLPQMAI-PRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNRTNGAFYMTVVF  343 (433)
T ss_pred             HHHHHHHHHHhhccccCCChHHHHHH-HHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccCCCeeEEEeecc
Confidence              233444333323345678899988 7777653  45665 8899999999999999888888888999999999975

>PRK06348 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.9e-47  Score=352.77  Aligned_cols=294  Identities=23%  Similarity=0.400  Sum_probs=252.1

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~  114 (343)
                      .+.++|+.|.|+    +++++.+.+++.+.... ....|+++.|.++||+++++++.+++|.++++++|++|+|+++++.
T Consensus        29 ~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~  103 (384)
T PRK06348         29 PDIIDLSLGDPD----LITDESIINAAFEDAKK-GHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMY  103 (384)
T ss_pred             CCcEEcCCCCCC----CCCCHHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHH
Confidence            468999999965    56667777765554443 3468999999999999999999988899999999999999999999


Q ss_pred             HHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298          115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (343)
Q Consensus       115 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~  194 (343)
                      .++.+++++||+|++++|+|..+...+...|.+++.+++.+++++.+|++++++.++++++++++++||||||.++|.++
T Consensus       104 ~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~  183 (384)
T PRK06348        104 LALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPTGAVFSKET  183 (384)
T ss_pred             HHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCCCCCCCcCCCHHH
Confidence            99999999999999999999999999999999999988766667889999999998888899999999999999999999


Q ss_pred             HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (343)
Q Consensus       195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  273 (343)
                      +++|+++|+++++++|+||+|.++.+++. ..++..+.. .+++|+++||||+|+++|+|+||+++++        ++++
T Consensus       184 ~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~--------~~~~  254 (384)
T PRK06348        184 LEEIAKIAIEYDLFIISDEVYDGFSFYED-FVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPD--------YIIE  254 (384)
T ss_pred             HHHHHHHHHHCCeEEEEecccccceeCCC-ccchhhcCCCcCcEEEEecchhccCCccccceeeecCH--------HHHH
Confidence            99999999999999999999999988653 233344432 4689999999999999999999999853        6888


Q ss_pred             HHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          274 RMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       274 ~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      .++..... ..+++.+.|.++ ..++.+..++++ .++.++++++.+.+.|+.++++.+..|+||+|+|+++
T Consensus       255 ~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~~~~~  325 (384)
T PRK06348        255 TAKIINEGICFSAPTISQRAA-IYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIYAFINI  325 (384)
T ss_pred             HHHHHHHhccCCCCHHHHHHH-HHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEec
Confidence            88776542 457788899888 666666556665 7888999999999999988788888899999999864

>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases

Probab=100.00  E-value=5.9e-47  Score=351.46  Aligned_cols=323  Identities=49%  Similarity=0.869  Sum_probs=270.3

Q ss_pred             cHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCC
Q 019298           16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLP   95 (343)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~   95 (343)
                      ++..+........   ..+.++++|+.|+|...+.+++++.+.+++.+.+.......|++..|.+++|+++++++++.++
T Consensus        15 ~~~~~~~~~~~~~---~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~   91 (403)
T TIGR01265        15 PIRAIVDNLKVKP---NPEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLP   91 (403)
T ss_pred             HHHHHHHHHHHHH---hcCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcC
Confidence            4556666555543   2367899999999875556788999999999988765556898889999999999999998778


Q ss_pred             CCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCce
Q 019298           96 YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTV  175 (343)
Q Consensus        96 ~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~  175 (343)
                      ..+++++|++|+|+++++..+++++.++||+|++++|+|..+...+...|.+++.+++.+++++.+|++.+++.++++++
T Consensus        92 ~~~~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~  171 (403)
T TIGR01265        92 GKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADEKTV  171 (403)
T ss_pred             CCCCHHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCcCcc
Confidence            88899999999999999999999999999999999999999999999999999999886666788999999999888899


Q ss_pred             EEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEE
Q 019298          176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG  255 (343)
Q Consensus       176 ~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G  255 (343)
                      ++++++||||||.+++.+++++|+++|+++|+++|+|++|.++.+++....++..+....++|+++||||.|+++|+|+|
T Consensus       172 ~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG  251 (403)
T TIGR01265       172 AIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLG  251 (403)
T ss_pred             EEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceEE
Confidence            99999999999999999999999999999999999999999999876554555566555689999999999999999999


Q ss_pred             EEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298          256 WFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSCVPSYKLIPELINFKS  333 (343)
Q Consensus       256 ~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~  333 (343)
                      |++++++..+. ..++++.+........+++.+.|.++ ..++.+ ...+++ .+++++++++.+.+.|+.++|+.+..|
T Consensus       252 ~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p  329 (403)
T TIGR01265       252 WIIIHDPHGIF-RDTVLQGLKNLLQRILGPATIVQGAL-PDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKP  329 (403)
T ss_pred             EEEEeCchhhh-HHHHHHHHHHHhhhhcCCChHHHHHH-HHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC
Confidence            99986532111 11245555555433456788999888 666643 345555 888999999999999998888887789


Q ss_pred             CCceEeeecC
Q 019298          334 TGSSLKYLDL  343 (343)
Q Consensus       334 ~~g~~~~~~l  343 (343)
                      ++|+|+|+++
T Consensus       330 ~~g~f~~~~~  339 (403)
T TIGR01265       330 EGAMYLMVKL  339 (403)
T ss_pred             CceeEEEEec
Confidence            9999999975

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.

>PRK05942 aspartate aminotransferase; Provisional

Probab=100.00  E-value=6.3e-47  Score=350.41  Aligned_cols=296  Identities=18%  Similarity=0.275  Sum_probs=251.9

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a  112 (343)
                      +.++++|+.|.|.    .++++.+.+++.+.+.......|+++.|.++||+++++|++++++..++++ +|++|+|++++
T Consensus        34 g~~~i~l~~g~p~----~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~a  109 (394)
T PRK05942         34 GLDLIDLGMGNPD----GAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEG  109 (394)
T ss_pred             CCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHH
Confidence            6678999999865    345666777766666544456899999999999999999998888888888 48999999999


Q ss_pred             HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       113 l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~  192 (343)
                      |..++.+++++||+|++++|+|+.+...+...|.+++.++++.+++|.+|++++++.+.++++++++++||||||.+++.
T Consensus       110 l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~s~  189 (394)
T PRK05942        110 LTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAPR  189 (394)
T ss_pred             HHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEcCCCCCCCCcCCH
Confidence            99999999999999999999999999888999999999998776778899999999888889999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  271 (343)
                      +++++|+++|+++|+++|+||+|..+.+++....++..+.. .+++|+++||||.|+++|+|+||++++        +++
T Consensus       190 ~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~--------~~l  261 (394)
T PRK05942        190 EFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGN--------RHI  261 (394)
T ss_pred             HHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecC--------HHH
Confidence            99999999999999999999999999886654444444433 346799999999999999999999984        478


Q ss_pred             HHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          272 VERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       272 ~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +++++.... ...+++...|.++ ..+|+...++++ .+++++++++.+.+.|+.+ |+.+..|++|+|+|+++
T Consensus       262 ~~~l~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~f~~~~~  333 (394)
T PRK05942        262 IQGLRTLKTNLDYGIFSALQKAA-ETALQLPDSYLQQVQERYRTRRDFLIQGLGEL-GWNIPPTKATMYLWVPC  333 (394)
T ss_pred             HHHHHHHHhhcccCCCHHHHHHH-HHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeeEEEEEC
Confidence            888887654 2456777888888 667765455655 8889999999999999887 78877899999999874

>PRK06290 aspartate aminotransferase; Provisional

Probab=100.00  E-value=9.4e-47  Score=349.46  Aligned_cols=293  Identities=21%  Similarity=0.304  Sum_probs=251.7

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCC-CCCC-cEEEecChHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYK-LTPN-DVFVTSGCTQ  111 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~-~~~~-~i~~~~g~~~  111 (343)
                      +.++++|+.|+|+    +++++.+.+++.+.+.......|++ .|.++||+++++++++.+|.. ++++ +|++|+|+++
T Consensus        43 ~~~~i~L~~g~p~----~~~~~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~  117 (410)
T PRK06290         43 DMELIDMGVGEPD----EMADESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKP  117 (410)
T ss_pred             CCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHH
Confidence            5678999999964    6678889998888765444567986 899999999999999888887 8887 7999999999


Q ss_pred             HHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccC
Q 019298          112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS  191 (343)
Q Consensus       112 al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~  191 (343)
                      +|..++++++++||.|++++|+|+.|...++..|.+++.++++.++++.+|++++++.+.++++++++++||||||.+++
T Consensus       118 al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~v~s  197 (410)
T PRK06290        118 ALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAVAT  197 (410)
T ss_pred             HHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCcCCC
Confidence            99999999999999999999999999999999999999999987777889999999988878999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchH
Q 019298          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK  270 (343)
Q Consensus       192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~  270 (343)
                      .+++++|+++|++|++++|+||+|.++.+++. +.++..+.. .+++|+++||||.|+++|+|+||++++        ++
T Consensus       198 ~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~-~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~--------~~  268 (410)
T PRK06290        198 KEFYEEVVDFAKENNIIVVQDAAYAALTFDGK-PLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGN--------EL  268 (410)
T ss_pred             HHHHHHHHHHHHHcCeEEEEecchhhceeCCC-CcChhcCCCccccEEEEeechhhcCCchhheEeEEeC--------HH
Confidence            99999999999999999999999999987653 223333332 357899999999999999999999985        46


Q ss_pred             HHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          271 VVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       271 ~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +++.+...... ..+++.++|.++ ..+|.+. ++++ .++.++++++.+.+.|+++ |+.+..|+||+|+|+++
T Consensus       269 l~~~l~~~~~~~~~~~~~~~q~aa-~~~l~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~g~f~l~v~l  340 (410)
T PRK06290        269 IVKAFATVKDNNDSGQFIAIQKAG-IYALDHP-EITEKIREKYSRRLDKLVKILNEV-GFKAEMPGGTFYLYVKA  340 (410)
T ss_pred             HHHHHHHHHhccccCCcHHHHHHH-HHHhhCc-HHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCeeeEEEEEC
Confidence            88888776543 345566788887 7777763 5555 8899999999999999998 88887899999999864

>PRK08636 aspartate aminotransferase; Provisional

Probab=100.00  E-value=7.2e-47  Score=350.88  Aligned_cols=321  Identities=20%  Similarity=0.248  Sum_probs=257.5

Q ss_pred             cCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHH
Q 019298            4 SNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR   83 (343)
Q Consensus         4 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr   83 (343)
                      |++..+.+..  .+..+.....+ .+  ..+.+.++|+.|.|+    .+.++.+.+++.+........+|+++.|.++||
T Consensus         7 ~~~~~~~~~~--~~~~~~~~~~~-~~--~~~~~~~~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR   77 (403)
T PRK08636          7 FNKIKRLPKY--VFAEVNELKMA-AR--RAGEDIIDFSMGNPD----GPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLR   77 (403)
T ss_pred             HHHHHhCCcc--HHHHHHHHHHH-HH--hcCCCEEEcCCcCCC----CCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHH
Confidence            3444444443  45444443322 21  236778999999865    334566667666655544467899999999999


Q ss_pred             HHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCC
Q 019298           84 RAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD  162 (343)
Q Consensus        84 ~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d  162 (343)
                      +++|+|+++++|+.++++ +|++|+|+++++..++++++++||+|++++|+|+.+...++..|.+++.++++.++++++|
T Consensus        78 ~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d  157 (403)
T PRK08636         78 LAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELD  157 (403)
T ss_pred             HHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccC
Confidence            999999998889889998 7999999999999999999999999999999999999999999999999988655668899


Q ss_pred             HHHH----Hhhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC-
Q 019298          163 LDDI----ESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST-  234 (343)
Q Consensus       163 ~~~l----~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~-  234 (343)
                      ++.+    +++++   .+++++++++||||||.++|.+++++|+++|++|++++|+||+|..+.+++....++..++.. 
T Consensus       158 ~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~  237 (403)
T PRK08636        158 EDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAK  237 (403)
T ss_pred             hhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCcc
Confidence            7754    55553   367889999999999999999999999999999999999999999998876544555555432 


Q ss_pred             CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHH
Q 019298          235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLE  312 (343)
Q Consensus       235 ~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~  312 (343)
                      +++++++||||+|+++|+|+||++++        +++++++.+.... ..+++.+.|.++ ..+++....+++ .++.++
T Consensus       238 ~~~i~~~S~SK~~~~~GlRiG~iv~~--------~~li~~~~~~~~~~~~~~~~~~q~~~-~~~~~~~~~~~~~~~~~~~  308 (403)
T PRK08636        238 DVAVESYTLSKSYNMAGWRVGFVVGN--------KKLVGALKKIKSWLDYGMFTPIQVAA-TIALDGDQSCVEEIRETYR  308 (403)
T ss_pred             ccEEEEEecccccCCccceeeeeeCC--------HHHHHHHHHHHHHhcccCChHHHHHH-HHHHhCcHHHHHHHHHHHH
Confidence            46788999999999999999999885        4688888776542 345667778777 456654456665 888899


Q ss_pred             HHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          313 NFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       313 ~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++++.+.+.|++. |+.+..|++|+|+|+++
T Consensus       309 ~~~~~l~~~L~~~-~~~~~~p~~g~~~~~~l  338 (403)
T PRK08636        309 KRRDVLIESFANA-GWELQKPRASMFVWAKI  338 (403)
T ss_pred             HHHHHHHHHHHHC-CCcccCCCcceEEEEEC
Confidence            9999999999987 78877899999999975

>PRK09147 succinyldiaminopimelate transaminase; Provisional

Probab=100.00  E-value=7.6e-47  Score=350.25  Aligned_cols=318  Identities=21%  Similarity=0.301  Sum_probs=260.9

Q ss_pred             cCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHH
Q 019298            4 SNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR   83 (343)
Q Consensus         4 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr   83 (343)
                      ++|..+.+++  .+..+...+.+..  +..+.++++|+.|+|+    +++++.+.+++.+.+.  ....|+++.|.++||
T Consensus         2 ~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr   71 (396)
T PRK09147          2 NPRLDRLQPY--PFEKLRALFAGVT--PPADLPPISLSIGEPK----HPTPAFIKDALAANLD--GLASYPTTAGLPALR   71 (396)
T ss_pred             cchhhcCCcc--hHHHHHHHHHhhh--hccCCCeEecCCCCCC----CCCCHHHHHHHHHHhh--hhcCCCCCCCCHHHH
Confidence            4566666655  5555555443321  1237899999999965    6678899999988765  356899999999999


Q ss_pred             HHHHHHHhhhCCCC-CCCC-cEEEecChHHHHHHHHHHhcCC---CCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCC
Q 019298           84 RAIAEYLSRDLPYK-LTPN-DVFVTSGCTQAIDVAMALLSRP---GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG  158 (343)
Q Consensus        84 ~~ia~~~~~~~~~~-~~~~-~i~~~~g~~~al~~~~~~l~~~---gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  158 (343)
                      +++++++.+++|.. ++++ +|++|+|+++++..++++++++   ||.|++++|+|..|...++..|.+++.++++++++
T Consensus        72 ~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~  151 (396)
T PRK09147         72 EAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANN  151 (396)
T ss_pred             HHHHHHHHHHhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCcccc
Confidence            99999999888888 8885 9999999999999999999999   89999999999999999999999999999987778


Q ss_pred             CCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC-CCCc-cc---ccC-
Q 019298          159 WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVP-MG---VFG-  232 (343)
Q Consensus       159 ~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~-~~~~-~~---~~~-  232 (343)
                      |.+|++++++.+.++++++++|+||||||.++|.+++++|+++|++|++++|+||+|..+.+++. ...+ +.   ..+ 
T Consensus       152 ~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~  231 (396)
T PRK09147        152 FAPDFDAVPAEVWARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGR  231 (396)
T ss_pred             CccCHHHHHHHHhhccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCc
Confidence            89999999988877899999999999999999999999999999999999999999999988653 1111 11   111 


Q ss_pred             -CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHH
Q 019298          233 -STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGN  309 (343)
Q Consensus       233 -~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~  309 (343)
                       ..+++|+++||||.|+++|+|+||++++        +++++++.+.... ..+++.+.|.++ .+++.. ..+++ .++
T Consensus       232 ~~~~~vi~~~S~SK~~~~~GlRiG~~~~~--------~~l~~~~~~~~~~~~~~~~~~~q~a~-~~~~~~-~~~~~~~~~  301 (396)
T PRK09147        232 DDFKRLVVFHSLSKRSNVPGLRSGFVAGD--------AALLKKFLLYRTYHGCAMPPAVQAAS-IAAWND-EAHVRENRA  301 (396)
T ss_pred             cccccEEEEeccccccCCccceeeeecCC--------HHHHHHHHHHhhhcccCCCHHHHHHH-HHHhcc-hhHHHHHHH
Confidence             2368999999999999999999999985        3688888766542 456788888887 455544 34444 889


Q ss_pred             HHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          310 FLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       310 ~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      .++++++.+.+.|+.+  +.+..|++|+|+|+++
T Consensus       302 ~~~~~~~~~~~~L~~~--~~~~~p~~g~f~~~~~  333 (396)
T PRK09147        302 LYREKFDAVTPILAPV--LDVQLPDAGFYLWAKV  333 (396)
T ss_pred             HHHHHHHHHHHHHHHh--cCCCCCCeeEEEEEEC
Confidence            9999999999998874  5566899999999975

>PRK06107 aspartate aminotransferase; Provisional

Probab=100.00  E-value=9e-47  Score=350.16  Aligned_cols=324  Identities=20%  Similarity=0.303  Sum_probs=269.6

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~   80 (343)
                      |++|+|....+++  ....+.....+..   ..+.++++|+.|.|.    +++++.+.+++.+.+... ..+|+++.|.+
T Consensus         4 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~   73 (402)
T PRK06107          4 FVPAARVSRIKPS--PSTAAAARARELR---AAGRSIVDLTVGEPD----FDTPDHIKQAAVAAIERG-ETKYTLVNGTP   73 (402)
T ss_pred             hhhhHHhhhcCcc--HHHHHHHHHHHHH---hccCCEEEcCCCCCC----CCCCHHHHHHHHHHHHcC-CCCCCCCCCCH
Confidence            4566776655544  3333333332222   226688999999965    566888999999988653 35799999999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (343)
                      +||+++++++++.+|..+.+++|++|+|+++++..++.+++++||+|++++|+|..|...+...+...+.++++.++++.
T Consensus        74 ~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~  153 (402)
T PRK06107         74 ALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFK  153 (402)
T ss_pred             HHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCC
Confidence            99999999999888988899999999999999999999999999999999999999998888888888888876566788


Q ss_pred             CCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhc-CcEEEEccCCCccccCCCCCCcccccCC--CCCE
Q 019298          161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL-KTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPI  237 (343)
Q Consensus       161 ~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~-~~~~i~D~ay~~~~~~~~~~~~~~~~~~--~~~~  237 (343)
                      +|++++++.+.++++++++++|+||||.+++.+++++++++|+++ ++++|+||+|..+.|.+...+++.....  .+++
T Consensus       154 ~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~v  233 (402)
T PRK06107        154 LTPEALEAAITPRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRV  233 (402)
T ss_pred             CCHHHHHhhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCE
Confidence            999999999888889999999999999999999999999999998 9999999999999887655455444432  3589


Q ss_pred             EEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHH
Q 019298          238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFA  315 (343)
Q Consensus       238 i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~  315 (343)
                      ++++||||.|+++|+|+||++++        ++++++++..... ..+++.+.|.++ ..+|.+...+++ .++.+++++
T Consensus       234 i~~~S~SK~~~~pGlRiG~~~~~--------~~~~~~~~~~~~~~~~~~s~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~  304 (402)
T PRK06107        234 LVTNGVSKTYAMTGWRIGYAAGP--------ADLIAAINKLQSQSSSCPSSISQAAA-AAALNGDQSFVTESVAVYKQRR  304 (402)
T ss_pred             EEEeccchhhcCcccceeeeecC--------HHHHHHHHHHHHhcccCCChHHHHHH-HHHhcCChHHHHHHHHHHHHHH
Confidence            99999999999999999999985        4688888887653 567899999999 777754455665 888899999


Q ss_pred             HHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          316 GSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       316 ~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +.+.+.|++++|+.+..|+||+|+|+++
T Consensus       305 ~~~~~~L~~~~g~~~~~p~gg~~~~~~~  332 (402)
T PRK06107        305 DYALALLNAIPGLSCLVPDGAFYLYVNC  332 (402)
T ss_pred             HHHHHHHhcCCCCcccCCCcceEEeeec
Confidence            9999999988888888999999999874

>PTZ00377 alanine aminotransferase; Provisional

Probab=100.00  E-value=8.7e-47  Score=357.09  Aligned_cols=335  Identities=21%  Similarity=0.315  Sum_probs=263.0

Q ss_pred             cccCccccCcCcccc-HHHHHHHHHhhcccc---ccccceeEeccCCCCCCC------------CCCC------------
Q 019298            2 EISNGGIDNTGSIIT-IKGMLSLLMQSVDDE---KNEKKVISLAMGDPTVHS------------CFHT------------   53 (343)
Q Consensus         2 ~~s~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~i~l~~g~~~~~~------------~~~~------------   53 (343)
                      .+|+|..++.++... +......+..+....   ..+..+|+|++|+|+...            .+..            
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~   88 (481)
T PTZ00377          9 DINPRVVAAEYAVRGLVPARAAEIKEELKTGKGKYPFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSL   88 (481)
T ss_pred             ccCHHHhhhhhhcCChHHHHHHHHHHHHhcCCccCCcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCcccccc
Confidence            467788888877222 233333333211100   135799999999984100            0112            


Q ss_pred             -cHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc-CCCCeEEE
Q 019298           54 -THVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RPGANILL  129 (343)
Q Consensus        54 -~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~~gd~vl~  129 (343)
                       +..+.+++.++++..  ....|+++.|.++||+++++++.+++|..+++++|++|+|+++++..++++++ ++||.|++
T Consensus        89 ~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv  168 (481)
T PTZ00377         89 FPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMI  168 (481)
T ss_pred             CCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEE
Confidence             446667777666542  35679999999999999999999888999999999999999999999999998 79999999


Q ss_pred             eCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCCCcccccCHHHHHHHHHHHh
Q 019298          130 PRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETAN  203 (343)
Q Consensus       130 ~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~  203 (343)
                      ++|+|+.|...++..|.+++.++++++++|.+|+++|++++++      +++++++++||||||.+++.+++++|+++|+
T Consensus       169 ~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~  248 (481)
T PTZ00377        169 PIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCY  248 (481)
T ss_pred             CCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHH
Confidence            9999999999999999999999998778899999999998864      6888999999999999999999999999999


Q ss_pred             hcCcEEEEccCCCccccCC-CCCCccc----ccCCC----CCEEEEccCccc-cCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298          204 KLKTLVIADEVYGHLVFGD-KPFVPMG----VFGST----VPILTLGSLSKR-WIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (343)
Q Consensus       204 ~~~~~~i~D~ay~~~~~~~-~~~~~~~----~~~~~----~~~i~~~S~sK~-~~~~G~r~G~i~~~~~~~~~~~~~~~~  273 (343)
                      +||+++|+||+|..+.|++ ..+.++.    .+...    .++|+++||||+ ++++|+|+||+++.+.     ++++++
T Consensus       249 ~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~-----p~~li~  323 (481)
T PTZ00377        249 EKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNI-----PPEVRE  323 (481)
T ss_pred             HCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCC-----CHHHHH
Confidence            9999999999999999853 3333332    12221    369999999997 5889999999987320     247888


Q ss_pred             HHhhhhccccCcchHHHHHHHhccchhh-------HHHHH----HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298          274 RMKKYFDILGDPATFIQVCIMYGCLSTI-------MQIMI----HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD  342 (343)
Q Consensus       274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~-------~~~l~----~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~  342 (343)
                      ++.+......+++.++|.++ ..+|+.+       ..+.+    .++.++++++.+.+.|+.++|+.+..|+||+|+|++
T Consensus       324 ~l~~~~~~~~~~~~~~Q~a~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~  402 (481)
T PTZ00377        324 QIYKLASINLCSNVVGQLMT-GLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPR  402 (481)
T ss_pred             HHHHHhheecCCChHHHHHH-HHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEee
Confidence            88877654557888999998 6666421       22433    444679999999999999989998899999999975

>PRK08960 hypothetical protein; Provisional

Probab=100.00  E-value=2.2e-46  Score=346.15  Aligned_cols=318  Identities=23%  Similarity=0.373  Sum_probs=266.4

Q ss_pred             ccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHH
Q 019298            3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT   82 (343)
Q Consensus         3 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~l   82 (343)
                      +|++..++.++  .+..+.....+..   ..+.++++|+.|.|+    +++++.+.+++.+.+.... ..|.+..|.+++
T Consensus         5 ~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~-~~Y~~~~g~~~l   74 (387)
T PRK08960          5 YSRRSRDIEPF--HVMALLARANELE---AAGHDVIHLEIGEPD----FTTAEPIVAAGQAALAAGH-TRYTAARGLPAL   74 (387)
T ss_pred             hhhHHHhCCch--HHHHHHHHHHHHH---hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhcCC-CccCCCCCCHHH
Confidence            56666666655  5666666554432   226678999999964    6778999999999887543 479888999999


Q ss_pred             HHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCC
Q 019298           83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD  162 (343)
Q Consensus        83 r~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d  162 (343)
                      |+++++++.+++|.++++++|++|+|++++|..++.+++++||+|++++|+|+.+...+...|.+++.++++.++++.+|
T Consensus        75 r~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d  154 (387)
T PRK08960         75 REAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLT  154 (387)
T ss_pred             HHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCC
Confidence            99999999988898899999999999999999999999999999999999999999999999999999998766678899


Q ss_pred             HHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEcc
Q 019298          163 LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS  242 (343)
Q Consensus       163 ~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S  242 (343)
                      ++.+++.++++++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++.. .++...  .+++++++|
T Consensus       155 ~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~-~~~~~~--~~~vi~~~S  231 (387)
T PRK08960        155 PALVERHWNADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDA-ASVLEV--DDDAFVLNS  231 (387)
T ss_pred             HHHHHHHhCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCC-CChhhc--cCCEEEEee
Confidence            99999998888899999999999999999999999999999999999999999998876432 233222  358999999


Q ss_pred             CccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHHH
Q 019298          243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSCV  319 (343)
Q Consensus       243 ~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~~  319 (343)
                      |||.||++|+|+||+++++        +++++++.... ...+++.+.|.++ .+++.+ ...+++ .++.++++++.+.
T Consensus       232 ~SK~~g~~GlRiG~~~~~~--------~~~~~~~~~~~~~~~~~s~~~q~a~-~~~l~~~~~~~l~~~~~~~~~~~~~l~  302 (387)
T PRK08960        232 FSKYFGMTGWRLGWLVAPP--------AAVPELEKLAQNLYISASTPAQHAA-LACFEPETLAILEARRAEFARRRDFLL  302 (387)
T ss_pred             cccccCCcccEEEEEEcCH--------HHHHHHHHHHhhhccCCCHHHHHHH-HHHhhcCcHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999863        68888877654 3456788898888 666653 235555 7889999999999


Q ss_pred             HhhcCCCCcee-eCCCCceEeeecC
Q 019298          320 PSYKLIPELIN-FKSTGSSLKYLDL  343 (343)
Q Consensus       320 ~~L~~~~g~~~-~~~~~g~~~~~~l  343 (343)
                      +.|+.+ |+.+ ..|+||+|+|+++
T Consensus       303 ~~L~~~-~~~~~~~p~g~~f~~~~~  326 (387)
T PRK08960        303 PALREL-GFGIAVEPQGAFYLYADI  326 (387)
T ss_pred             HHHHhc-CCcCCcCCCeeEEEEEec
Confidence            999987 6663 4799999999874

>PRK09265 aminotransferase AlaT; Validated

Probab=100.00  E-value=6.3e-46  Score=344.84  Aligned_cols=305  Identities=25%  Similarity=0.441  Sum_probs=250.3

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      .+.++++|+.|.|+.+ ++++++.+.+++.+.+..  ...|+++.|.++||+++++++.++...++++++|++|+|++++
T Consensus        31 ~~~~~i~l~~g~p~~~-~~~~~~~i~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~  107 (404)
T PRK09265         31 EGHKILKLNIGNPAPF-GFEAPDEILRDVIRNLPT--AQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSEL  107 (404)
T ss_pred             cCCCeEEecCCCCCcC-CCCCCHHHHHHHHHHhhc--CCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHH
Confidence            4678999999998643 356788888888876653  4689999999999999999998654447899999999999999


Q ss_pred             HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       113 l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~  192 (343)
                      +..++++++++||+|++++|+|..+...++..|.+++.++++.++++.+|++++++.++++++++++++||||||.+++.
T Consensus       108 l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~~~  187 (404)
T PRK09265        108 IVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSK  187 (404)
T ss_pred             HHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccccceEEEEECCCCCCCcCCCH
Confidence            99999999999999999999999999999999999988887665677899999999988889999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  272 (343)
                      +++++|+++|+++|+++|+||+|.++.+++....++..+....++++++||||+|+++|+|+||++++.+..+.  +.++
T Consensus       188 ~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~--~~~~  265 (404)
T PRK09265        188 ELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHA--KGYI  265 (404)
T ss_pred             HHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHH--HHHH
Confidence            99999999999999999999999999887655455555544457999999999999999999999975322110  1245


Q ss_pred             HHHhhhhccccCcchHHHHHHHhccchhhH---HHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          273 ERMKKYFDILGDPATFIQVCIMYGCLSTIM---QIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       273 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~---~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +.++.......+++.++|.++ ..+|.+..   ++++.+++++++++.+.+.|+.++|+.+..|++|+|+|+++
T Consensus       266 ~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~l~~~~  338 (404)
T PRK09265        266 EGLDMLASMRLCANVPAQHAI-QTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGALYAFPKL  338 (404)
T ss_pred             HHHHHHhccccCCCcHHHHHH-HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEEe
Confidence            555433333457788889888 66665422   23334457888899999999988888888999999999864

>PRK12414 putative aminotransferase; Provisional

Probab=100.00  E-value=7.9e-46  Score=341.82  Aligned_cols=294  Identities=22%  Similarity=0.388  Sum_probs=253.8

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~a  112 (343)
                      ..+.++|+.|.|+    +++++.+.+++.+.+... ...|+++.|.++||+++++++++.+|...++ ++|++|+|++++
T Consensus        28 ~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~a  102 (384)
T PRK12414         28 QHDALNLSQGAPN----FAPDPALVEGVARAMRDG-HNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEG  102 (384)
T ss_pred             hCCeEEcCCCCCC----CCCCHHHHHHHHHHHHhC-CCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHH
Confidence            4568999999964    667899999998877653 3589999999999999999999888877765 689999999999


Q ss_pred             HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       113 l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~  192 (343)
                      +..++++++++||+|++++|+|..+...++..|.+++.++++. +++.+|++.+++.++++++++++++||||||.+++.
T Consensus       103 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~  181 (384)
T PRK12414        103 LYAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSP-EDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSA  181 (384)
T ss_pred             HHHHHHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCc-cccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCH
Confidence            9999999999999999999999999999999999999998754 357899999999998889999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  271 (343)
                      +++++|+++|++|++++|+||+|..+.|++....++..+.. .+++|+++||||.|+++|+|+||++++        +++
T Consensus       182 ~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~--------~~l  253 (384)
T PRK12414        182 ADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAP--------AEL  253 (384)
T ss_pred             HHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecC--------HHH
Confidence            99999999999999999999999999887654444444432 458999999999999999999999985        368


Q ss_pred             HHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          272 VERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       272 ~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++.+.+... ...+++.+.|.++ ..+|.+...+.+.++.++++++.+.+.|+++ |+.+..|+||+|+|+++
T Consensus       254 ~~~l~~~~~~~~~~~s~~~q~a~-~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~gg~~~~~~~  324 (384)
T PRK12414        254 MDEIRKVHQFMVFSADTPMQHAF-AEALAEPASYLGLGAFYQRKRDLLARELAGS-RFELLPSEGSFFMLARF  324 (384)
T ss_pred             HHHHHHHHhheecCCCcHHHHHH-HHHhcCChHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCcceEEEEcc
Confidence            888887754 3557788899888 7777765556668889999999999999998 78887899999999864

>PRK07568 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.6e-45  Score=341.93  Aligned_cols=323  Identities=25%  Similarity=0.382  Sum_probs=266.6

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~   80 (343)
                      |++|+|.....++  .++.+........   ..+.++++|+.|.|+    +++++.+.+++.+...  ....|++..|.+
T Consensus         1 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~--~~~~Y~~~~g~~   69 (397)
T PRK07568          1 MKISKRVLNMPAS--PIRKLVPYADEAK---KRGIKVYHLNIGQPD----IKTPEVFFEAIKNYDE--EVLAYSHSQGIP   69 (397)
T ss_pred             CchhhHhhhCCcc--hHHHHHHHHHHHH---hhCCCEEEecCCCCC----CCCCHHHHHHHHHHhc--CCcCcCCCCCCH
Confidence            6788888776655  5666654432221   114568999999954    5667888888887653  346799999999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (343)
                      ++|+++++++. .++.++++++|++|+|+++++..++..++++||+|++++|+|..+...++..|.+++.++++.++++.
T Consensus        70 ~lr~~ia~~~~-~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~  148 (397)
T PRK07568         70 ELREAFAKYYK-KWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFH  148 (397)
T ss_pred             HHHHHHHHHHH-HhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCC
Confidence            99999999998 47888899999999999999999999999999999999999999998889999999999886555555


Q ss_pred             C-CHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEE
Q 019298          161 V-DLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPIL  238 (343)
Q Consensus       161 ~-d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i  238 (343)
                      . ++++++++++++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|.++.+++....++..+.. .++++
T Consensus       149 ~~~~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i  228 (397)
T PRK07568        149 LPSKEEIEKLITPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVI  228 (397)
T ss_pred             CCCHHHHHHhcCccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEE
Confidence            3 689999998888999999999999999999999999999999999999999999999887654445544443 56899


Q ss_pred             EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHH
Q 019298          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGS  317 (343)
Q Consensus       239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~  317 (343)
                      +++||||.|+++|+|+||+++++       +++++++.+.....++++.+.|.++ ..+|++...+++ .++.++++++.
T Consensus       229 ~~~S~SK~~~~~G~R~G~~~~~~-------~~~~~~~~~~~~~~~~~s~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~  300 (397)
T PRK07568        229 IIDSVSKRYSACGARIGCLISKN-------KELIAAAMKLCQARLSPPTLEQIGA-AALLDTPESYFDEVREEYKKRRDI  300 (397)
T ss_pred             EEecchhhccCCCcceEEEecCC-------HHHHHHHHHHhhccCCCCcHHHHHH-HHHhhCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999853       3577776655433457788899888 777765455665 78889999999


Q ss_pred             HHHhhcCCCCceeeCCCCceEeeecC
Q 019298          318 CVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       318 ~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +.+.|++++|+.+..|+||+|+|+++
T Consensus       301 l~~~L~~~~~~~~~~p~g~~~~~~~l  326 (397)
T PRK07568        301 LYEELNKIPGVVCEKPKGAFYIIAKL  326 (397)
T ss_pred             HHHHHhcCCCceecCCCcceEEEEec
Confidence            99999998888887899999999875

>PLN02450 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=4.3e-46  Score=349.91  Aligned_cols=302  Identities=23%  Similarity=0.333  Sum_probs=246.1

Q ss_pred             hccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc-----------CCCCCCCCCCCCHHHHHHHHHHHhhhCC
Q 019298           27 SVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS-----------EKFNGYAPTAGLPLTRRAIAEYLSRDLP   95 (343)
Q Consensus        27 ~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~   95 (343)
                      .++.+.++.+.|+|+++++.    +.. +.+.+.++.....           ..+..|+++.|.++||+++|+|+.++++
T Consensus        30 ~y~~~~~p~g~i~L~~~En~----l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~  104 (468)
T PLN02450         30 PYDEIKNPSGIIQMGLAENQ----LSF-DLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRG  104 (468)
T ss_pred             CCCcccCCCeeEEeehhHhH----hhH-HHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhC
Confidence            45554557789999999942    333 5556655543210           1345699989999999999999998777


Q ss_pred             C--CCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHH-hcCceeEEeecCCCCCCCCCHHHHHhhhcC
Q 019298           96 Y--KLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA-FRHIEVRHFDLLPDKGWEVDLDDIESLADQ  172 (343)
Q Consensus        96 ~--~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~  172 (343)
                      .  .+++++|++|+|++++|..++.+++++||.|++++|+|+.|...+. ..|.+++.++++.++++.+|++++++++.+
T Consensus       105 ~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~  184 (468)
T PLN02450        105 NKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQ  184 (468)
T ss_pred             CCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHH
Confidence            4  4789999999999999999999999999999999999999988777 589999999987677888999999987753


Q ss_pred             ------CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccccc---------CCCCCE
Q 019298          173 ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF---------GSTVPI  237 (343)
Q Consensus       173 ------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~---------~~~~~~  237 (343)
                            ++++++++|||||||.+++.+++++|+++|++|++++|+||+|+.+.|++..+.++...         +..+++
T Consensus       185 ~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~v  264 (468)
T PLN02450        185 AQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRV  264 (468)
T ss_pred             HHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcE
Confidence                  68899999999999999999999999999999999999999999988876443332211         134689


Q ss_pred             EEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhhH---HHHH-HHHHHHH
Q 019298          238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIM---QIMI-HGNFLEN  313 (343)
Q Consensus       238 i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~---~~l~-~~~~~~~  313 (343)
                      ++++||||.|+++|+|+||+++++       +.+++.+.+... ...++.+.|.++ ..+|.+..   ++++ .++++++
T Consensus       265 i~l~S~SK~~~l~GlRiG~li~~~-------~~l~~~~~~~~~-~~~~s~~~Q~a~-~~~L~~~~~~~~~l~~~~~~l~~  335 (468)
T PLN02450        265 HIVYSLSKDLGLPGFRVGAIYSND-------EMVVSAATKMSS-FGLVSSQTQYLL-SALLSDKKFTKNYLEENQKRLKQ  335 (468)
T ss_pred             EEEEeccccCCCCCccEEEEEECC-------HHHHHHHHHHhh-cCCCCHHHHHHH-HHHhCCchhHHHHHHHHHHHHHH
Confidence            999999999999999999999964       235666655543 345688889988 77777632   3444 8899999


Q ss_pred             HHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          314 FAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       314 ~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +++.+.+.|+++ |+.+..|++|+|+|+++
T Consensus       336 rr~~l~~~L~~~-gi~~~~~~~g~flwi~l  364 (468)
T PLN02450        336 RQKKLVSGLEAA-GIKCLKSNAGLFCWVDM  364 (468)
T ss_pred             HHHHHHHHHHHc-CCcccCCCceEEEEEEc
Confidence            999999999998 88888899999999975

>PRK07337 aminotransferase; Validated

Probab=100.00  E-value=1.5e-45  Score=340.80  Aligned_cols=320  Identities=21%  Similarity=0.351  Sum_probs=263.0

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~   80 (343)
                      |.+|+|......+  .+..+.....+-.   ..+...++|+.|.|+    +++++.+.+++.+.+... ...|++..|.+
T Consensus         1 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~   70 (388)
T PRK07337          1 MRLAARVDAIEPF--YVMELAKEAQALE---RAGRDIIHMGIGEPD----FTAPEPVVEAAARALRRG-VTQYTSALGLA   70 (388)
T ss_pred             CchhhHhHhcCch--HHHHHHHHHHHHH---hcCCCEEEeCCcCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCH
Confidence            5677777665544  3444443333221   236788999999965    566788899998887643 45799988999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (343)
                      +||+++++|+++++|..+++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.++++.++++.
T Consensus        71 ~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  150 (388)
T PRK07337         71 PLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQ  150 (388)
T ss_pred             HHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCc
Confidence            99999999999888988999999999999999999999999999999999999999999899999999999987667789


Q ss_pred             CCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEE
Q 019298          161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL  240 (343)
Q Consensus       161 ~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~  240 (343)
                      +|++++++.++++++++++++||||||.+++.+++++|+++|+++++++|+||+|..+.+.+.. .+....  .++++++
T Consensus       151 ~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~-~~~~~~--~~~vi~~  227 (388)
T PRK07337        151 LTAADVEAAWGERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAP-VSALSL--GDDVITI  227 (388)
T ss_pred             CCHHHHHhhcCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCC-cChhhc--cCCEEEE
Confidence            9999999999888999999999999999999999999999999999999999999998876542 222222  3578999


Q ss_pred             ccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchh-h-HHHHHHHHHHHHHHHH
Q 019298          241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLST-I-MQIMIHGNFLENFAGS  317 (343)
Q Consensus       241 ~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~-~-~~~l~~~~~~~~~~~~  317 (343)
                      +||||.|+++|+|+||++++        +++++++..... ...+++.+.|.++ ..++.+ . ..+.+.++.++++++.
T Consensus       228 ~S~SK~~~~~G~RiG~~~~~--------~~l~~~l~~~~~~~~~~~s~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~r~~  298 (388)
T PRK07337        228 NSFSKYFNMTGWRLGWLVVP--------EALVGTFEKLAQNLFICASALAQHAA-LACFEPDTLAIYERRRAEFKRRRDF  298 (388)
T ss_pred             EechhhcCCchhheeeeecC--------HHHHHHHHHHHHHhccCCChHHHHHH-HHHhccCchHHHHHHHHHHHHHHHH
Confidence            99999999999999999985        368888877653 3446788888887 555653 1 2333488899999999


Q ss_pred             HHHhhcCCCCcee-eCCCCceEeeecC
Q 019298          318 CVPSYKLIPELIN-FKSTGSSLKYLDL  343 (343)
Q Consensus       318 ~~~~L~~~~g~~~-~~~~~g~~~~~~l  343 (343)
                      +.+.|+++ |+.+ ..|++|+|+|+++
T Consensus       299 ~~~~L~~~-~~~~~~~p~~g~f~~~~~  324 (388)
T PRK07337        299 IVPALESL-GFKVPVMPDGAFYVYADC  324 (388)
T ss_pred             HHHHHHhc-CCccccCCCeeEEEEEec
Confidence            99999987 6663 4789999999975

>PRK08363 alanine aminotransferase; Validated

Probab=100.00  E-value=1.4e-45  Score=342.11  Aligned_cols=326  Identities=28%  Similarity=0.434  Sum_probs=262.1

Q ss_pred             cccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHH
Q 019298            2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPL   81 (343)
Q Consensus         2 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~   81 (343)
                      .+|++..+.++   .+..+.....+..   ..+.++|+|+.|.|.. ..+++++.+.+++.+.+... ...|+++.|.++
T Consensus         3 ~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~i~l~~g~p~~-~~~~p~~~~~~~~~~~~~~~-~~~Y~~~~g~~~   74 (398)
T PRK08363          3 RASERAMGVEY---AIRDVVLPARELE---KKGIKVIRLNIGDPVK-FDFQPPEHMKEAYCRAIKEG-HNYYGPSEGLPE   74 (398)
T ss_pred             chhHHHHhccH---HHHHHHHHHHHHH---hcCCCeEEEeCCCCCc-CCCCCCHHHHHHHHHHHHcC-CCCCCCCCCcHH
Confidence            45556655542   2344433333321   2367899999999852 13678899999999887653 357988899999


Q ss_pred             HHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCC
Q 019298           82 TRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEV  161 (343)
Q Consensus        82 lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  161 (343)
                      ||+++++++++.+|+++++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.++...++++.+
T Consensus        75 lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~  154 (398)
T PRK08363         75 LREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQP  154 (398)
T ss_pred             HHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcC
Confidence            99999999998889899999999999999999999999999999999999999999999999999888874333456789


Q ss_pred             CHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEc
Q 019298          162 DLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLG  241 (343)
Q Consensus       162 d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~  241 (343)
                      |++.+++.++++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+.+. ..++..+....++++++
T Consensus       155 d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~-~~~~~~~~~~~~vi~~~  233 (398)
T PRK08363        155 DIDDIRKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGK-HVSPGSLTKDVPVIVMN  233 (398)
T ss_pred             CHHHHHhhCCcceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCc-ccCHHHcCcCCcEEEEe
Confidence            99999999888889999999999999999999999999999999999999999999887653 23344455556899999


Q ss_pred             cCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh----hccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHH
Q 019298          242 SLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAG  316 (343)
Q Consensus       242 S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~  316 (343)
                      ||||.|+++|+|+||+++.++      +++++.++..    .....+++.+.|.++ ..+|.+..++++ .+++++++++
T Consensus       234 SfSK~~~~~GlRiG~~~~~~~------~~~~~~l~~~~~~~~~~~~~~s~~~q~~~-~~~l~~~~~~l~~~~~~~~~~~~  306 (398)
T PRK08363        234 GLSKVYFATGWRLGYIYFVDP------EGKLAEVREAIDKLARIRLCPNTPAQFAA-IAGLTGPMDYLEEYMKKLKERRD  306 (398)
T ss_pred             cchhccCCccceEEEEEEeCc------HHHHHHHHHHHHHHhcccccCChHHHHHH-HHHHhCChHHHHHHHHHHHHHHH
Confidence            999999999999999998321      2345544433    222356788889888 666665456665 8899999999


Q ss_pred             HHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          317 SCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       317 ~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      .+.+.|+.++++.+..|+||+|+|+++
T Consensus       307 ~l~~~L~~~~~~~~~~p~g~~~~~~~l  333 (398)
T PRK08363        307 YIYKRLNEIPGISTTKPQGAFYIFPRI  333 (398)
T ss_pred             HHHHHHhcCCCCEecCCCeEEEEEEEe
Confidence            999999988888887899999999753

>PRK09257 aromatic amino acid aminotransferase; Provisional

Probab=100.00  E-value=3e-46  Score=346.09  Aligned_cols=328  Identities=19%  Similarity=0.200  Sum_probs=249.6

Q ss_pred             CccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCC-CCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHH
Q 019298            5 NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTV-HSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR   83 (343)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr   83 (343)
                      +|....+++  .+..+...+....     .+++|||+.|.|.. ...++..+.+.+++++..+.....+|++..|.++||
T Consensus         3 ~~~~~~~~~--~~~~~~~~~~~~~-----~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR   75 (396)
T PRK09257          3 EHLEAAPAD--PILGLMEAFRADP-----RPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYR   75 (396)
T ss_pred             ccCCCCCCC--hHHHHHHHHhhCC-----CcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHH
Confidence            445566665  5666665554433     35789999997521 111222478889888877655556899999999999


Q ss_pred             HHHHHHHhhhCCCCCCCCcE--EEecChHHHHHHHHHHh--cCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC
Q 019298           84 RAIAEYLSRDLPYKLTPNDV--FVTSGCTQAIDVAMALL--SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW  159 (343)
Q Consensus        84 ~~ia~~~~~~~~~~~~~~~i--~~~~g~~~al~~~~~~l--~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  159 (343)
                      +++++|+.+..+..+++++|  ++|+|+++++..+++.+  +++||+|++++|+|+.|...++..|++++.+++..++++
T Consensus        76 ~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~  155 (396)
T PRK09257         76 QAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATK  155 (396)
T ss_pred             HHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccC
Confidence            99999997655545688887  99999999999998776  489999999999999999999999999999988444567


Q ss_pred             CCCHHHHHhhhcC---CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccC-CCCCCcccccC-CC
Q 019298          160 EVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG-DKPFVPMGVFG-ST  234 (343)
Q Consensus       160 ~~d~~~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~-~~~~~~~~~~~-~~  234 (343)
                      ++|++.+++.++.   ++.++++++||||||.++|.+++++|+++|++||+++|+||+|.++.++ +....++..+. ..
T Consensus       156 ~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~  235 (396)
T PRK09257        156 GLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAG  235 (396)
T ss_pred             ccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcC
Confidence            8999999988752   3455666999999999999999999999999999999999999998875 22233333333 23


Q ss_pred             CCEEEEccCccccCCCCCcEEEEEE--eCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhh------HHHH
Q 019298          235 VPILTLGSLSKRWIVPGWRLGWFVT--TDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTI------MQIM  305 (343)
Q Consensus       235 ~~~i~~~S~sK~~~~~G~r~G~i~~--~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~------~~~l  305 (343)
                      +++|+++||||+|+++|+|+||+++  +++..+   ..++.+++... ....+++.+.|.++ ..+|.+.      .+++
T Consensus       236 ~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~  311 (396)
T PRK09257        236 LELLVASSFSKNFGLYGERVGALSVVAEDAEEA---DRVLSQLKATIRTNYSNPPAHGAAIV-ATILNDPELRAEWEAEL  311 (396)
T ss_pred             CcEEEEEEcCCcCccccccceeEEEEeCCHHHH---HHHHHHHHHHhhhhcCCCcHHHHHHH-HHHhCCHHHHHHHHHHH
Confidence            5899999999999999999999984  221100   02334444433 23455688888877 6666653      2233


Q ss_pred             H-HHHHHHHHHHHHHHhhcCCC---CceeeCCCCceEeeecC
Q 019298          306 I-HGNFLENFAGSCVPSYKLIP---ELINFKSTGSSLKYLDL  343 (343)
Q Consensus       306 ~-~~~~~~~~~~~~~~~L~~~~---g~~~~~~~~g~~~~~~l  343 (343)
                      + .+++++++++.+.+.|+++.   ++.+..|+||+|+|+++
T Consensus       312 ~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l  353 (396)
T PRK09257        312 EEMRERIKAMRQLLVEALKAKGPSRDFDFIARQRGMFSYSGL  353 (396)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCcccccccceEEEecCC
Confidence            3 88999999999999998862   36677899999999975

>PLN02607 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=7.5e-46  Score=345.74  Aligned_cols=327  Identities=18%  Similarity=0.269  Sum_probs=261.0

Q ss_pred             cccCccccCcCc-cccHHHHHHHHH-hhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc-----------C
Q 019298            2 EISNGGIDNTGS-IITIKGMLSLLM-QSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS-----------E   68 (343)
Q Consensus         2 ~~s~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-----------~   68 (343)
                      .+|+|+...... ..+.......+. +..++..++.++|+|++++.     ......+.+.+++....           .
T Consensus        12 ~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~np~g~i~l~~aeN-----~l~~d~l~~~~~~~~~~~~~~~~~~~~~~   86 (447)
T PLN02607         12 GLSKVAVSETHGEDSPYFAGWKAYDEDPYDESHNPSGVIQMGLAEN-----QVSFDLLEEYLKQHPEASSWGGKGAPGFR   86 (447)
T ss_pred             hhhhhhhhcccCCCchHHHHHHHhcCCCCCcccCCCceEEEechhh-----hhhHHHHHHHHHhCchhhccccccccccc
Confidence            567777666632 113333332233 33555577889999999982     34567777777664320           1


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHhhhCC--CCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHH-hcC
Q 019298           69 KFNGYAPTAGLPLTRRAIAEYLSRDLP--YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA-FRH  145 (343)
Q Consensus        69 ~~~~Y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~-~~g  145 (343)
                      ....|.+..|.+.||+++|+|+++.++  .++++++|++|+|+++++..++.+++++||.|++++|+|+.+...+. ..|
T Consensus        87 ~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g  166 (447)
T PLN02607         87 ENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTG  166 (447)
T ss_pred             hhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCC
Confidence            234588889999999999999998776  36899999999999999999999999999999999999999987776 478


Q ss_pred             ceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298          146 IEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV  219 (343)
Q Consensus       146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~  219 (343)
                      .+++.++++.+++|.+|++++++++++      ++++++++|||||||.+++++++++|+++|++|++++|+||+|+.++
T Consensus       167 ~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~  246 (447)
T PLN02607        167 VKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSV  246 (447)
T ss_pred             cEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccc
Confidence            999999987777788999999998763      67899999999999999999999999999999999999999999998


Q ss_pred             cCCCCCCccccc----C--C-CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHH
Q 019298          220 FGDKPFVPMGVF----G--S-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVC  292 (343)
Q Consensus       220 ~~~~~~~~~~~~----~--~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a  292 (343)
                      |++.++.++..+    +  . .+++++++||||.||++|+|+||+++.+       +++++.++.... +..++.+.|.+
T Consensus       247 f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n-------~~l~~~~~~~~~-~~~~s~~~q~~  318 (447)
T PLN02607        247 FSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYN-------DKVVTTARRMSS-FTLVSSQTQHL  318 (447)
T ss_pred             cCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcC-------HHHHHHHHHHhh-cCCCCHHHHHH
Confidence            876555554332    1  1 4689999999999999999999999843       457777765543 34567788888


Q ss_pred             HHhccchhh---HHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          293 IMYGCLSTI---MQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       293 ~~~~~l~~~---~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      + ..+|++.   .++++ .+++++++++.+.+.|++. |+.+..+++|+|+|++|
T Consensus       319 ~-~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~~~~~~ag~fvw~~L  371 (447)
T PLN02607        319 L-ASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIECLKGNAGLFCWMNL  371 (447)
T ss_pred             H-HHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcccCCeeEEEEEEc
Confidence            8 7777763   23443 7889999999999999998 88888899999999986

>PRK05957 aspartate aminotransferase; Provisional

Probab=100.00  E-value=3.5e-45  Score=338.05  Aligned_cols=319  Identities=22%  Similarity=0.297  Sum_probs=262.9

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~   80 (343)
                      |++++|.....++   +........+.      ..+.++|+.|.|+    +++++.+.+++++.+.......|++..|.+
T Consensus         2 ~~~~~~~~~~~~~---~~~~~~~~~~~------~~~~~~l~~g~~~----~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~   68 (389)
T PRK05957          2 TQFTSRMDAVQSP---IIPVVGQLIRE------NPGTISLGQGVVS----YPPPPEAIEALNNFLANPENHKYQAVQGIP   68 (389)
T ss_pred             chhhHHHHhcCCc---HHHHHHHHHHh------CCCeEEccCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCH
Confidence            5677777555544   33333322222      2467999999964    678899999999887655556899999999


Q ss_pred             HHHHHHHHHHhhhCCCCCC-CCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC
Q 019298           81 LTRRAIAEYLSRDLPYKLT-PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW  159 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~-~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  159 (343)
                      ++|+++++++.+.+|..++ +++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.++.+  +++
T Consensus        69 ~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~  146 (389)
T PRK05957         69 PLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTD--DNY  146 (389)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecC--CCC
Confidence            9999999999988887777 7899999999999999999999999999999999999988888899999998874  457


Q ss_pred             CCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccccc-CCCCCEE
Q 019298          160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPIL  238 (343)
Q Consensus       160 ~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~-~~~~~~i  238 (343)
                      .+|+++++++++++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++....+.... +...++|
T Consensus       147 ~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i  226 (389)
T PRK05957        147 QLQPEAIEQAITPKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTI  226 (389)
T ss_pred             CcCHHHHHHhcCcCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEE
Confidence            899999999998889999999999999999999999999999999999999999999998875432232222 4446899


Q ss_pred             EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHH
Q 019298          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAG  316 (343)
Q Consensus       239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~  316 (343)
                      +++||||.|+++|+|+||++++        +++++++...... ..+++.+.|.++ ..+|.+...+++ .++.++++++
T Consensus       227 ~~~S~SK~~g~~GlRiG~~~~~--------~~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~r~  297 (389)
T PRK05957        227 SLYSLSKAYGFASWRIGYMVIP--------IHLLEAIKKIQDTILICPPVVSQYAA-LGALQVGKSYCQQHLPEIAQVRQ  297 (389)
T ss_pred             EEecchhhccCccceeEEEecC--------HHHHHHHHHHHhhcccCCCcHHHHHH-HHHHhCChHHHHHHHHHHHHHHH
Confidence            9999999999999999999985        3688888877643 446677888888 666765445555 7788999999


Q ss_pred             HHHHhhcCCCCc-eeeCCCCceEeeecC
Q 019298          317 SCVPSYKLIPEL-INFKSTGSSLKYLDL  343 (343)
Q Consensus       317 ~~~~~L~~~~g~-~~~~~~~g~~~~~~l  343 (343)
                      .+.+.|+.++++ .+..|+||+|+|+++
T Consensus       298 ~l~~~L~~~~~~~~~~~~~gg~~~~~~~  325 (389)
T PRK05957        298 ILLKSLGQLQDRCTLHPANGAFYCFLKV  325 (389)
T ss_pred             HHHHHHHhcCCCccccCCCeeEEEEEeC
Confidence            999999988775 677899999999874

>PRK07550 hypothetical protein; Provisional

Probab=100.00  E-value=5.2e-45  Score=336.98  Aligned_cols=322  Identities=22%  Similarity=0.253  Sum_probs=268.6

Q ss_pred             ccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHH
Q 019298            3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT   82 (343)
Q Consensus         3 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~l   82 (343)
                      +++|..+..+.  .++.+...+....   ..+.+.++|+.|.|+    .++++.+.+++.+.+.......|++..|.++|
T Consensus         2 ~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~l   72 (386)
T PRK07550          2 LNPLIAALFPP--PIPEVRAWLAGYD---GADGPLIDLSQAVPG----YPPPPELLRALAEAAADPAAHLYGPVEGLPEL   72 (386)
T ss_pred             cchhhhhcCCh--HHHHHHHHHHHHh---hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHH
Confidence            56677776655  6777777654443   236778999999965    55678899999888765556789888999999


Q ss_pred             HHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCC
Q 019298           83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD  162 (343)
Q Consensus        83 r~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d  162 (343)
                      |+++++++.+.+|..+++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.+++++++++.+|
T Consensus        73 r~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~  152 (386)
T PRK07550         73 REAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPD  152 (386)
T ss_pred             HHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCC
Confidence            99999999988898899999999999999999999999999999999999999999999999999999998766778899


Q ss_pred             HHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccccc-CCCCCEEEEc
Q 019298          163 LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLG  241 (343)
Q Consensus       163 ~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~-~~~~~~i~~~  241 (343)
                      .+++++.++++++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++....+.... +..+++++++
T Consensus       153 ~~~l~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~  232 (386)
T PRK07550        153 PAAAEALITPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLY  232 (386)
T ss_pred             HHHHHHHhcccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEe
Confidence            999999998889999999999999999999999999999999999999999999987654332222222 2345899999


Q ss_pred             cCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHH
Q 019298          242 SLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCV  319 (343)
Q Consensus       242 S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~  319 (343)
                      ||||.|+++|+|+||+++++        +++++++.... ...+++.+.|.++ ..++.+..++++ .++.++++++.+.
T Consensus       233 S~SK~~g~~G~RiG~i~~~~--------~~~~~~~~~~~~~~~~~s~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~l~  303 (386)
T PRK07550        233 SFSKSYALTGHRVGAVVASP--------ARIAEIEKFMDTVAICAPRIGQIAV-AWGLPNLADWRAGNRAEIARRRDAFR  303 (386)
T ss_pred             cchhhccCcccceEeeecCH--------HHHHHHHHHHhhcccCCCcHHHHHH-HHHhccHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999853        67777776654 3456788888888 677766556665 7888999999999


Q ss_pred             HhhcCCCCceeeCCCCceEeeecC
Q 019298          320 PSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       320 ~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +.|..++++.+ .+++|+|+|+++
T Consensus       304 ~~L~~~~~~~~-~~~g~~~~~~~~  326 (386)
T PRK07550        304 AVFARLPGWEL-LASGAYFAYVRH  326 (386)
T ss_pred             HHHHhCCCcee-CCCceEEEEecC
Confidence            99988767655 578999999864

>PRK08361 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.8e-45  Score=340.55  Aligned_cols=295  Identities=26%  Similarity=0.447  Sum_probs=253.6

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      ..+.++|+.|+|.    +++++.+.+++++++... ...|.+..|.++||+++++++.+.+|.++++++|++|+|+++++
T Consensus        32 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al  106 (391)
T PRK08361         32 MENVISLGIGEPD----FDTPKNIKEAAKRALDEG-WTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEAT  106 (391)
T ss_pred             hcCeEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHH
Confidence            3568999999965    566789999999887654 45798889999999999999988888889999999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~  193 (343)
                      ..++.+++++||+|++++|+|..+...+...|.+++.++++.++++.+|++++++.++++++++++++|+||||.+++.+
T Consensus       107 ~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~  186 (391)
T PRK08361        107 YLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKE  186 (391)
T ss_pred             HHHHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCCCCCcCcCHH
Confidence            99999999999999999999999999999999999999988776788999999999988899999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  273 (343)
                      ++++|+++|+++++++|+||+|.++.+++....++.... .+++++++||||+|+++|+|+||++++        +++++
T Consensus       187 ~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~i~~~s~SK~~~~~GlRiG~~~~~--------~~~~~  257 (391)
T PRK08361        187 VAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYA-PDNTILANSFSKTFAMTGWRLGFVIAP--------EQVIK  257 (391)
T ss_pred             HHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcC-CCCEEEEecCchhcCCcHhhhhhhccC--------HHHHH
Confidence            999999999999999999999999987654433433332 257999999999999999999999985        36777


Q ss_pred             HHhhhhc-cccCcchHHHHHHHhccchhhH--HHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          274 RMKKYFD-ILGDPATFIQVCIMYGCLSTIM--QIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       274 ~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~--~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++..... ..++++.+.|.++ ..+|.+..  ++++ .++.++++++.+.+.|+.++|+.+..|+||+|+|+++
T Consensus       258 ~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~~~~~l  330 (391)
T PRK08361        258 DMIKLHAYIIGNVASFVQIAG-IEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFYVFANI  330 (391)
T ss_pred             HHHHHHhhhccCCChHHHHHH-HHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEEEEEEC
Confidence            7776653 2457788888888 66666533  2344 8888999999999999998888888999999999864

>PRK05764 aspartate aminotransferase; Provisional

Probab=100.00  E-value=4.1e-45  Score=338.76  Aligned_cols=324  Identities=27%  Similarity=0.397  Sum_probs=272.8

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~   80 (343)
                      |++|+|..+..++  ++..+.....+..   ..+.+.++|+.|+|.    +++++.+.+++.+.+.+.. ..|++..|.+
T Consensus         2 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~   71 (393)
T PRK05764          2 MKLSKRVSRVTPS--ATLAVTAKAKELK---AQGRDVISLGAGEPD----FDTPEHIKEAAIEALDDGK-TKYTPAAGIP   71 (393)
T ss_pred             cchhhhhhhcCch--HHHHHHHHHHHHH---hccCCEEEeCCCCCC----CCCCHHHHHHHHHHHhcCC-CCcCCCCChH
Confidence            6789999998877  6666555544322   235788999999965    5677899999988876543 4699989999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (343)
                      .||+++++++.+.+|..+++++|++|+|+++++..++.+++++||.|++++|+|..+...++..|.+++.++.++++++.
T Consensus        72 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~  151 (393)
T PRK05764         72 ELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFK  151 (393)
T ss_pred             HHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCc
Confidence            99999999998888888899999999999999999999999999999999999999999999999999999987667788


Q ss_pred             CCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccccc--CCCCCEE
Q 019298          161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF--GSTVPIL  238 (343)
Q Consensus       161 ~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~--~~~~~~i  238 (343)
                      +|++.+++.++++++++++++|+||||.+++.+++++|+++|++|++++|+||+|+.+.+++....++..+  +..++++
T Consensus       152 ~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i  231 (393)
T PRK05764        152 LTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTI  231 (393)
T ss_pred             CCHHHHHHhhCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEE
Confidence            99999999998888999999999999999999999999999999999999999999998865443344333  2345899


Q ss_pred             EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHH
Q 019298          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAG  316 (343)
Q Consensus       239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~  316 (343)
                      +++||||.++++|+|+||++++        ++++++++.... ...+++++.|.++ ..+|.....+++ .++.++++++
T Consensus       232 ~~~s~SK~~~~~G~RiG~i~~~--------~~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~  302 (393)
T PRK05764        232 TVNGFSKAYAMTGWRLGYAAGP--------KELIKAMSKLQSHSTSNPTSIAQYAA-VAALNGPQDEVEEMRQAFEERRD  302 (393)
T ss_pred             EEecCcccccCccceeEEEecC--------HHHHHHHHHHHhhcccCCChHHHHHH-HHHHcCChHHHHHHHHHHHHHHH
Confidence            9999999999999999999974        468888877654 3457788888887 566653245554 7888999999


Q ss_pred             HHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          317 SCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       317 ~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      .+.+.|++++|+.+..|+||+|+|+++
T Consensus       303 ~l~~~L~~~~g~~~~~~~g~~~~~~~~  329 (393)
T PRK05764        303 LMVDGLNEIPGLECPKPEGAFYVFPNV  329 (393)
T ss_pred             HHHHHHhhCCCCcccCCCcceEEEEec
Confidence            999999998888887899999999864

>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase

Probab=100.00  E-value=3.1e-45  Score=339.11  Aligned_cols=308  Identities=23%  Similarity=0.347  Sum_probs=253.0

Q ss_pred             cHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCC
Q 019298           16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLP   95 (343)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~   95 (343)
                      .+..+...+.+...  ..+.+.++|+.|+|.    +++++.+++++++.+.  ....|+++.|.++||+++|+|+.+.++
T Consensus        11 ~~~~~~~~~~~~~~--~~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~~   82 (393)
T TIGR03538        11 PFEKLAALLAGVTP--PASKPPIALSIGEPK----HPTPAFVLEALRENLH--GLSTYPTTKGLPELRQAIARWLERRFD   82 (393)
T ss_pred             HHHHHHHHHHhhhh--hcCCCeEEecCCCCC----CCCCHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHHHHHHhhC
Confidence            45555444432211  126889999999964    6778999999998765  356899999999999999999998878


Q ss_pred             CC--CCCC-cEEEecChHHHHHHHHHHhcCCCCe--EEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhh
Q 019298           96 YK--LTPN-DVFVTSGCTQAIDVAMALLSRPGAN--ILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA  170 (343)
Q Consensus        96 ~~--~~~~-~i~~~~g~~~al~~~~~~l~~~gd~--vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~  170 (343)
                      .+  ++++ +|++|+|+++++..++++++++||.  |++++|+|..|...++..|.+++.+++++++++.+|++++++.+
T Consensus        83 ~~~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~  162 (393)
T TIGR03538        83 LPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESV  162 (393)
T ss_pred             CcccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHH
Confidence            75  7885 8999999999999999999999986  99999999999999999999999999977777889999999988


Q ss_pred             cCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC-CCCc-ccc---c--CCCCCEEEEccC
Q 019298          171 DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVP-MGV---F--GSTVPILTLGSL  243 (343)
Q Consensus       171 ~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~-~~~~-~~~---~--~~~~~~i~~~S~  243 (343)
                      .++++++++++||||||.+++.+++++|+++|++||+++|+||+|..+.+++. ...+ +..   .  ...+++|+++||
T Consensus       163 ~~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~  242 (393)
T TIGR03538       163 WRRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSL  242 (393)
T ss_pred             hhcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecc
Confidence            77899999999999999999999999999999999999999999999887642 2222 111   1  134689999999


Q ss_pred             ccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHh
Q 019298          244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPS  321 (343)
Q Consensus       244 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~  321 (343)
                      ||.|+++|+|+||++++        +++++++.+.... ..+++.+.|.++ ...+.+ .++++ .++.++++++.+.+.
T Consensus       243 SK~~~~~GlRvG~~i~~--------~~l~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~-~~~~~~~~~~~~~~~~~~~~~  312 (393)
T TIGR03538       243 SKRSNLPGLRSGFVAGD--------AEILKAFLRYRTYHGCAMPIPTQLAS-IAAWND-EQHVRENRALYREKFAAVLEI  312 (393)
T ss_pred             hhhcCCcccceEEEecC--------HHHHHHHHHHHHhhccCcCHHHHHHH-HHHhcC-hHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999985        3688888776542 446778888887 455554 34554 888999999999999


Q ss_pred             hcCCCCceeeCCCCceEeeecC
Q 019298          322 YKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       322 L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      |+.+  +.+..|++|+|+|+++
T Consensus       313 L~~~--~~~~~p~gg~f~~~~~  332 (393)
T TIGR03538       313 LGQV--LDLELPDAGFYLWPKV  332 (393)
T ss_pred             HHhh--CcccCCCeeEEEEEEC
Confidence            9874  4556899999999975

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

Probab=100.00  E-value=3.5e-45  Score=316.12  Aligned_cols=295  Identities=21%  Similarity=0.350  Sum_probs=264.3

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      ...++.|.+.+.    .++.+|.+.+++++..+++.+ +|+  .+.+++.+++++|+++++++.+.++.|++++|...++
T Consensus        24 ~~DvlPmWVADM----Df~~pp~i~~Al~~rvdhGvf-GY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi   96 (388)
T COG1168          24 NEDVLPMWVADM----DFPTPPEIIEALRERVDHGVF-GYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGI   96 (388)
T ss_pred             CCCcceeeeecc----cCCCCHHHHHHHHHHHhcCCC-CCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhH
Confidence            368999999994    599999999999999987654 787  5678999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCC-CCCCCCCHHHHHhhhcCC-ceEEEEeCCCCCcccccC
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP-DKGWEVDLDDIESLADQN-TVALVIINPGNPCGNVYS  191 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~~~~~-~~~i~~~~p~nptG~~~~  191 (343)
                      ..+++.++++||.|++..|.|+++....+..|.++...|+.. ++.|.+|+++||+++.+. .++.++||||||||.+++
T Consensus        97 ~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt  176 (388)
T COG1168          97 SLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWT  176 (388)
T ss_pred             HHHHHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCcccc
Confidence            999999999999999999999999999999999999999874 455888999999988764 589999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC--CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCch
Q 019298          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST--VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP  269 (343)
Q Consensus       192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~--~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~  269 (343)
                      +++|++|.++|++||+.||+||.|+++++.+..+.++..++..  ++.|.|.|.||+|.++|+++++++.+|       +
T Consensus       177 ~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n-------~  249 (388)
T COG1168         177 KEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISN-------R  249 (388)
T ss_pred             HHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecC-------H
Confidence            9999999999999999999999999999999777777666554  689999999999999999999999986       3


Q ss_pred             HHHHHHhhh-h-ccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcC-CCCceeeCCCCceEeeecC
Q 019298          270 KVVERMKKY-F-DILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKL-IPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       270 ~~~~~l~~~-~-~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~-~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++.++..+. . .....+|.++..|. .++++....|++ +.+.++.+++.+.+.|++ +|++.+..|+|++.+|+|+
T Consensus       250 ~lr~~~~~~l~~~~~~~~n~lg~~A~-~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~  326 (388)
T COG1168         250 ELRAKFLKRLKRNGLHGPSALGIIAT-EAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAWLDC  326 (388)
T ss_pred             HHHHHHHHHHHHhcCCCCchHHHHHH-HHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCCCceeeeeec
Confidence            454444333 2 23568899998888 899999999998 999999999999999987 7999999999999999986

>PRK06108 aspartate aminotransferase; Provisional

Probab=100.00  E-value=6.2e-45  Score=336.41  Aligned_cols=296  Identities=25%  Similarity=0.376  Sum_probs=254.1

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      ..++++|+.|+|+    +++++.+.+++++.+.+.. ..|+++.|.++||+++++++.+.+|..+++++|++|+|+++++
T Consensus        23 ~~~~i~l~~g~~~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al   97 (382)
T PRK06108         23 REGVLPLWFGESD----LPTPDFIRDAAAAALADGE-TFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQAL   97 (382)
T ss_pred             cCCeEEecCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHH
Confidence            3468999999964    7778999999999887643 4699999999999999999998888889999999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCC-CCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD-KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~  192 (343)
                      ..++..++++||.|++++|+|..+...++..|.+++.++++.+ ++|.+|++++++.++++++++++++||||||.+++.
T Consensus        98 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~  177 (382)
T PRK06108         98 MLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASR  177 (382)
T ss_pred             HHHHHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccCH
Confidence            9999999999999999999999999999999999999998753 467899999999888788999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCccccC-CCCCCccccc-CCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchH
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVFG-DKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK  270 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~-~~~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~  270 (343)
                      +++++|+++|+++|+++|+||+|.++.++ +....++..+ ...+++++++||||.|+++|+|+||++++        ++
T Consensus       178 ~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~--------~~  249 (382)
T PRK06108        178 DDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAP--------PA  249 (382)
T ss_pred             HHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCC--------HH
Confidence            99999999999999999999999999886 3333333333 23468999999999999999999999985        36


Q ss_pred             HHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          271 VVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       271 ~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +++++..... ...+++.+.|.++ ..+|.+...+++ .+++++++++.+.+.|++++|+.+..|++|+|+|+++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~q~a~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~~~~~l  323 (382)
T PRK06108        250 LGQVLEKLIEYNTSCVAQFVQRAA-VAALDEGEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRI  323 (382)
T ss_pred             HHHHHHHHHHhcccCCChHHHHHH-HHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeC
Confidence            8888876643 2456788888888 677766455555 8888999999999999988888887899999999874

>PRK07682 hypothetical protein; Validated

Probab=100.00  E-value=1.9e-45  Score=339.04  Aligned_cols=293  Identities=25%  Similarity=0.409  Sum_probs=251.5

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHH
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAI  113 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al  113 (343)
                      .+.|+|+.|+|+    +++++.+.+++.+.+.. ....|++..|.+++|+++++++++++|..++++ +|++|+|+++++
T Consensus        20 ~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al   94 (378)
T PRK07682         20 EGVISLGVGEPD----FVTPWNVREASIRSLEQ-GYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQAL   94 (378)
T ss_pred             CCeEEeCCCCCC----CCCCHHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH
Confidence            468999999965    55677788888887764 356799889999999999999998888888886 899999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~  193 (343)
                      ..++++++++||+|++++|+|+.|...++..|.+++.++++.++++.+|++++++++.++++++++++||||||.+++.+
T Consensus        95 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~  174 (378)
T PRK07682         95 DVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKS  174 (378)
T ss_pred             HHHHHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHH
Confidence            99999999999999999999999999999999999999887666788999999999888899999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  272 (343)
                      ++++|+++|++|++++|+||+|.++.+++. ..++..+.. .+++++++||||.|+++|+|+||++++        ++++
T Consensus       175 ~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~--------~~~i  245 (378)
T PRK07682        175 ELEEIAVIVEKHDLIVLSDEIYAELTYDEA-YTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAP--------VYFS  245 (378)
T ss_pred             HHHHHHHHHHHcCcEEEEehhhhhcccCCC-CCChhhcccccCCEEEEecCcccccChhhhhhhhhcC--------HHHH
Confidence            999999999999999999999999998753 223333332 368999999999999999999999985        3688


Q ss_pred             HHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          273 ERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       273 ~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +++...... ..+++.+.|.++ ..+|.+...+++ .++.++++++.+.+.|+++ |+.+..|+||+|+|+++
T Consensus       246 ~~l~~~~~~~~~~~~~~~q~a~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~g~~~~~~~~  316 (378)
T PRK07682        246 EAMLKIHQYSMMCAPTMAQFAA-LEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI-GLTCHVPGGAFYAFPSI  316 (378)
T ss_pred             HHHHHHHHhhccCCCHHHHHHH-HHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC-CCccCCCCeeEEEEEec
Confidence            888776542 456788889888 677765444454 8888999999999999998 88888899999999853

>PLN02231 alanine transaminase

Probab=100.00  E-value=1e-44  Score=343.56  Aligned_cols=297  Identities=23%  Similarity=0.311  Sum_probs=242.1

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc--C-CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS--E-KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  110 (343)
                      .+..|+|+.+.+    .++.  .+++...+.+.+  + ....|+++.|.++||++|++|+.+++|..+++++|++|+|++
T Consensus       128 ~p~~i~~~~~~~----~fp~--~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~  201 (534)
T PLN02231        128 HPSLLDKSETHG----LFSA--DAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGAS  201 (534)
T ss_pred             CCccCCCCCccc----cCCH--HHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHH
Confidence            346788875542    2332  444444455543  2 467899999999999999999999889999999999999999


Q ss_pred             HHHHHHHHHhc-CCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCC
Q 019298          111 QAIDVAMALLS-RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPG  183 (343)
Q Consensus       111 ~al~~~~~~l~-~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~  183 (343)
                      +++..++++++ .+||.|+++.|+|+.|...+...|.+++.++++++++|++|+++|++++++      ++++++++|||
T Consensus       202 ~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~  281 (534)
T PLN02231        202 PAVHMMMQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPG  281 (534)
T ss_pred             HHHHHHHHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCC
Confidence            99999999998 479999999999999999999999999999998777899999999998864      57889999999


Q ss_pred             CCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccC-CCCCCcccccC-------CCCCEEEEccCcccc-CCCCCcE
Q 019298          184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG-DKPFVPMGVFG-------STVPILTLGSLSKRW-IVPGWRL  254 (343)
Q Consensus       184 nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~-~~~~~~~~~~~-------~~~~~i~~~S~sK~~-~~~G~r~  254 (343)
                      ||||.+++.+++++|+++|+++|+++|+||+|.+++|+ +..+.++..+.       ...++++++||||.| +++|+|+
T Consensus       282 NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRi  361 (534)
T PLN02231        282 NPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRG  361 (534)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccce
Confidence            99999999999999999999999999999999999995 34444443331       123699999999976 7899999


Q ss_pred             EEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhh-------HHHHH----HHHHHHHHHHHHHHhhc
Q 019298          255 GWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTI-------MQIMI----HGNFLENFAGSCVPSYK  323 (343)
Q Consensus       255 G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~-------~~~l~----~~~~~~~~~~~~~~~L~  323 (343)
                      ||+++++.     ++++++++.+......+++...|.++ ..+++.+       ..+++    .++.++++++.+.+.|+
T Consensus       362 Gy~~~~~~-----~~~l~~~l~k~~~~~~~s~~~~Q~~~-~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~  435 (534)
T PLN02231        362 GYMEVTGF-----TSDVREQIYKVASVNLCSNISGQILA-SLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALN  435 (534)
T ss_pred             EEEEEecC-----CHHHHHHHHHHHhhhcCCChHHHHHH-HHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99987421     24688888777654556677788877 6666431       22232    57889999999999999


Q ss_pred             CCCCceeeCCCCceEeeec
Q 019298          324 LIPELINFKSTGSSLKYLD  342 (343)
Q Consensus       324 ~~~g~~~~~~~~g~~~~~~  342 (343)
                      +++|+.+..|+||+|+|++
T Consensus       436 ~~~gi~~~~p~Ggfylw~~  454 (534)
T PLN02231        436 SLEGVTCNKAEGAMYLFPR  454 (534)
T ss_pred             cCCCceecCCCeeeEEecc
Confidence            9989998899999999954

>PRK08912 hypothetical protein; Provisional

Probab=100.00  E-value=8.9e-45  Score=335.54  Aligned_cols=293  Identities=26%  Similarity=0.374  Sum_probs=248.4

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHH
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAI  113 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al  113 (343)
                      .++++|+.|.|+    .+.++.+.+++.+.+.+. ..+|+++.|.++||+++++++++.+|..++++ +|++|+|+++++
T Consensus        26 ~~~i~l~~g~p~----~~~p~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al  100 (387)
T PRK08912         26 HGAINLGQGFPD----DPGPEDVRRAAADALLDG-SNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEAL  100 (387)
T ss_pred             CCeEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHH
Confidence            478999999976    345677888877776543 46899999999999999999998888889998 999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~  193 (343)
                      ..++..++++||+|++++|+|+.+...++..|.+++.+++++ +++.+|++.+++.++.+++++++++||||||.+++.+
T Consensus       101 ~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~  179 (387)
T PRK08912        101 AAALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEP-PHWRLPRAALAAAFSPRTKAVLLNNPLNPAGKVFPRE  179 (387)
T ss_pred             HHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccCcCCHHHHHHHhCccceEEEEeCCCCCcCcccCHH
Confidence            999999999999999999999999999999999999998753 4578999999999888889999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  272 (343)
                      ++++|+++|++|++++|+||+|..+.+++....++..... .+++++++||||.|+++|+|+||++++        ++++
T Consensus       180 ~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~--------~~~~  251 (387)
T PRK08912        180 ELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAA--------PPLL  251 (387)
T ss_pred             HHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecC--------HHHH
Confidence            9999999999999999999999999887644334433332 468999999999999999999999985        4688


Q ss_pred             HHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          273 ERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       273 ~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +.+...... .++.++..|.++ ..++....++++ .+++++++++.+.+.|+.+ |+.+..++||+|+|+++
T Consensus       252 ~~l~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~g~~~l~~~l  322 (387)
T PRK08912        252 RVLAKAHQFLTFTTPPNLQAAV-AYGLGKPDDYFEGMRADLARSRDRLAAGLRRI-GFPVLPSQGTYFLTVDL  322 (387)
T ss_pred             HHHHHHHhhccccCChHHHHHH-HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEecc
Confidence            888766542 345666677777 455544345555 8899999999999999998 78887899999999875

>PRK07683 aminotransferase A; Validated

Probab=100.00  E-value=1.7e-44  Score=333.23  Aligned_cols=314  Identities=22%  Similarity=0.366  Sum_probs=259.9

Q ss_pred             cCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHH
Q 019298            4 SNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR   83 (343)
Q Consensus         4 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr   83 (343)
                      |.|.....+.  .+.........       .++.++|+.|.|.    +++++.+.+++.+.+... ...|++..|.++||
T Consensus         6 ~~~~~~~~~~--~~~~~~~~~~~-------~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~~~-~~~Y~~~~g~~~lr   71 (387)
T PRK07683          6 NPRVKDIQIS--GIRQFSNMVQN-------YDNLISLTIGQPD----FPTPSHVKEAAKRAITEN-YTSYTHNAGLLELR   71 (387)
T ss_pred             hHHHHhCCcc--HHHHHHHHHHh-------cCCeEEecCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHH
Confidence            4555555444  45554443321       4578999999965    566788999999987653 46899889999999


Q ss_pred             HHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCC
Q 019298           84 RAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD  162 (343)
Q Consensus        84 ~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d  162 (343)
                      +++++++.+++|.+++++ +|++|+|+++++..++++++++||+|++++|+|..+...++..|.+++.++.+. +++.+|
T Consensus        72 ~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~  150 (387)
T PRK07683         72 KAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRS-TGFRLT  150 (387)
T ss_pred             HHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCc-ccCCCC
Confidence            999999998888888998 999999999999999999999999999999999999999999999999998754 567789


Q ss_pred             HHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccccc-CCCCCEEEEc
Q 019298          163 LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLG  241 (343)
Q Consensus       163 ~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~-~~~~~~i~~~  241 (343)
                      .+.+++.++++++++++++||||||.+++.+++++|+++|+++|+++|+||+|..+.+++.. .++..+ +..+++|+++
T Consensus       151 ~~~l~~~~~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~-~~~~~~~~~~~~vi~~~  229 (387)
T PRK07683        151 AEALENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPH-TSIAHFPEMREKTIVIN  229 (387)
T ss_pred             HHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCc-CChhhccCCcCCeEEEe
Confidence            99999998888899999999999999999999999999999999999999999999876543 334444 2345899999


Q ss_pred             cCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHH
Q 019298          242 SLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCV  319 (343)
Q Consensus       242 S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~  319 (343)
                      ||||.|+++|+|+||++++        +++++++.+.... ..+++.+.|.++ ..+|.+...+++ .+++++++++.+.
T Consensus       230 s~SK~~~~pGlRiG~i~~~--------~~l~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~  300 (387)
T PRK07683        230 GLSKSHSMTGWRIGFLFAP--------SYLAKHILKVHQYNVTCASSISQYAA-LEALTAGKDDAKMMRHQYKKRRDYVY  300 (387)
T ss_pred             eccccccCccceeEEEEcC--------HHHHHHHHHHHHhccCCCChHHHHHH-HHHHhCChHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999985        3688888766432 345677888888 667765444554 7888999999999


Q ss_pred             HhhcCCCCceeeCCCCceEeeecC
Q 019298          320 PSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       320 ~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +.|... |+.+..|+||+|+|+.+
T Consensus       301 ~~l~~~-~~~~~~~~~~~~~~~~~  323 (387)
T PRK07683        301 NRLISM-GLDVEKPTGAFYLFPSI  323 (387)
T ss_pred             HHHHHc-CCcccCCCeeEEEEEec
Confidence            999887 78888899999999853

>PRK07590 L,L-diaminopimelate aminotransferase; Validated

Probab=100.00  E-value=2.1e-44  Score=335.02  Aligned_cols=289  Identities=16%  Similarity=0.224  Sum_probs=237.2

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE----KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~  109 (343)
                      +.++++|+.|+|+    +++++.+.+++++++...    ...+|+++.|.++||+++++++.+.+|.++++++|++|+|+
T Consensus        33 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga  108 (409)
T PRK07590         33 EAKIIRLGIGDVT----QPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGA  108 (409)
T ss_pred             CCceEEecCcCCC----CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCH
Confidence            5678999999955    677888999988887642    45689888999999999999998888999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCce-----------eEEeecCCCCCCCCCHHHHHhhhcCCceEEE
Q 019298          110 TQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIE-----------VRHFDLLPDKGWEVDLDDIESLADQNTVALV  178 (343)
Q Consensus       110 ~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~-----------~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~  178 (343)
                      ++++..+. .++.+||+|++++|+|..|...++..|.+           ++.++++.++++.+|+++      +++++++
T Consensus       109 ~~al~~l~-~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~------~~~k~i~  181 (409)
T PRK07590        109 KCDTGNIL-DIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE------EKVDIIY  181 (409)
T ss_pred             HHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcc------cCceEEE
Confidence            99999865 45689999999999999999999999986           888888765566665432      4789999


Q ss_pred             EeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEE
Q 019298          179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWF  257 (343)
Q Consensus       179 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i  257 (343)
                      +|+||||||.++|.+++++|+++|++||+++|+||+|..+.+++..+.++..++. .+++|+++||||+|+++|+|+||+
T Consensus       182 l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~  261 (409)
T PRK07590        182 LCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYT  261 (409)
T ss_pred             EeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEE
Confidence            9999999999999999999999999999999999999999876644444444443 247999999999999999999999


Q ss_pred             EEeCCCCCCCchHHHHH------------Hhhhhc-cccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHHHHhh
Q 019298          258 VTTDPCGMFRKPKVVER------------MKKYFD-ILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSCVPSY  322 (343)
Q Consensus       258 ~~~~~~~~~~~~~~~~~------------l~~~~~-~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~~~~L  322 (343)
                      ++++        +++++            +..... ...+++.+.|.++ ..++.+ ...+++ .++.++++++.+.+.|
T Consensus       262 i~~~--------~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~-~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L  332 (409)
T PRK07590        262 VVPK--------ELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAA-EAVYSPEGKAQIKELIDYYMENAKIIREGL  332 (409)
T ss_pred             EcCH--------HHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHH-HHHhcCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            9963        45542            111121 1235788889888 566653 234555 8889999999999999


Q ss_pred             cCCCCceeeCCCCceEeeecC
Q 019298          323 KLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       323 ~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +.+ |+.+..|++|+|+|+++
T Consensus       333 ~~~-~~~~~~~~g~~f~wi~~  352 (409)
T PRK07590        333 ESA-GFEVYGGVNAPYIWVKT  352 (409)
T ss_pred             Hhc-CCceecCCcceEEEEEC
Confidence            998 78887889999999975

>PTZ00376 aspartate aminotransferase; Provisional

Probab=100.00  E-value=6e-45  Score=337.98  Aligned_cols=326  Identities=15%  Similarity=0.141  Sum_probs=243.3

Q ss_pred             CccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHH
Q 019298            5 NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPT-VHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR   83 (343)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr   83 (343)
                      +|..+.+++  ++..+....++..     .++++||+.|.|. ..+...+.+.+.+++.+........+|+++.|.++||
T Consensus         6 ~~~~~~~~~--~~~~~~~~~~~~~-----~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR   78 (404)
T PTZ00376          6 SQVPLGPPD--PILGLAAAFKADP-----SPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFI   78 (404)
T ss_pred             hcCCcCCCC--hHHHHHHHHhhcC-----CcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHH
Confidence            344455555  5666666554322     4678999999853 1121223344555554433333457899999999999


Q ss_pred             HHHHHHHhhhCCCCCCCCcEE--EecChHHHHHHHHH---HhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCC
Q 019298           84 RAIAEYLSRDLPYKLTPNDVF--VTSGCTQAIDVAMA---LLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG  158 (343)
Q Consensus        84 ~~ia~~~~~~~~~~~~~~~i~--~~~g~~~al~~~~~---~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  158 (343)
                      +++++|+.+..+..+++++|+  .|.|+++++..++.   +++++||+|++++|+|+.|...++..|.+++.+++.++++
T Consensus        79 ~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~  158 (404)
T PTZ00376         79 EAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKT  158 (404)
T ss_pred             HHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCccc
Confidence            999999966555567889998  58999999988875   5679999999999999999999999999999999865566


Q ss_pred             CCCCHHHHHhhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC--CCCcccccCC
Q 019298          159 WEVDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK--PFVPMGVFGS  233 (343)
Q Consensus       159 ~~~d~~~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~--~~~~~~~~~~  233 (343)
                      +++|++.++++++   ++++++++++||||||.+++.+++++|+++|++|++++|+||+|.++.+++.  ...++..+..
T Consensus       159 ~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~  238 (404)
T PTZ00376        159 KGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAE  238 (404)
T ss_pred             CCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHh
Confidence            8999999999885   2456677899999999999999999999999999999999999999988641  2222333322


Q ss_pred             -CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH----HHhhhh-ccccCcchHHHHHHHhccchhh---HHH
Q 019298          234 -TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE----RMKKYF-DILGDPATFIQVCIMYGCLSTI---MQI  304 (343)
Q Consensus       234 -~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~----~l~~~~-~~~~~~~~~~~~a~~~~~l~~~---~~~  304 (343)
                       .+++|+++||||+|+++|+|+||+++.-     .++++++    .+++.. ....+++.++|.++ ..+|.+.   ..|
T Consensus       239 ~~~~vi~i~SfSK~~~~~GlRvG~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~  312 (404)
T PTZ00376        239 RGVEFLVAQSFSKNMGLYGERIGALHIVC-----ANKEEAANVLSQLKLIIRPMYSSPPIHGARIA-DRILSDPELRAEW  312 (404)
T ss_pred             cCCcEEEEEeCCCcccccccccceEEEEe-----CCHHHHHHHHHHHHHHHhhhcCCCchHHHHHH-HHHhCCHHHHHHH
Confidence             3489999999999999999999984210     0234444    444333 22345677888888 7777654   233


Q ss_pred             HH----HHHHHHHHHHHHHHhhcCCC---CceeeCCCCceEeeecC
Q 019298          305 MI----HGNFLENFAGSCVPSYKLIP---ELINFKSTGSSLKYLDL  343 (343)
Q Consensus       305 l~----~~~~~~~~~~~~~~~L~~~~---g~~~~~~~~g~~~~~~l  343 (343)
                      .+    .+++++++|+.+.+.|++++   ++.+..|+||+|+|+++
T Consensus       313 ~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~  358 (404)
T PTZ00376        313 LSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIINQIGMFSFTGL  358 (404)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCceEEEecCC
Confidence            22    56789999999999998862   35566899999999874

>TIGR03537 DapC succinyldiaminopimelate transaminase

Probab=100.00  E-value=1.6e-44  Score=329.26  Aligned_cols=288  Identities=21%  Similarity=0.325  Sum_probs=245.5

Q ss_pred             eeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHH
Q 019298           37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDV  115 (343)
Q Consensus        37 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~  115 (343)
                      +++|+.|.|.    +++++.+.+++++...  ....|+++.|.++||+++++++.+.+|++++++ +|++|+|+++++..
T Consensus         2 ~~~~~~g~p~----~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~   75 (350)
T TIGR03537         2 LFDFGTGDPK----EPTPPFIRKALIDAVP--EVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFH   75 (350)
T ss_pred             eEeccCCCCC----CCCCHHHHHHHHHHHh--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHH
Confidence            5799999964    6778899999988754  356899999999999999999998889889998 99999999999999


Q ss_pred             HHHHhcCCC---CeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298          116 AMALLSRPG---ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       116 ~~~~l~~~g---d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~  192 (343)
                      ++.+++++|   |+|++++|+|..|...++..|.+++.+++++++++.+|+++++++++++++++++++||||||.+++.
T Consensus        76 ~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~  155 (350)
T TIGR03537        76 FPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPR  155 (350)
T ss_pred             HHHHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCH
Confidence            999998887   69999999999999999999999999998766778899999999988889999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  272 (343)
                      +++++|+++|+++|+++|+||+|+.+.+++. ..++...+ .+++|+++||||.||++|+|+||++++        ++++
T Consensus       156 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~-~~~~i~~~s~SK~~g~~GlRiG~~~~~--------~~~~  225 (350)
T TIGR03537       156 SYLKETIAMCREHGIILCSDECYTEIYFGEP-PHSALEVG-IENVLAFHSLSKRSGMTGYRSGFVAGD--------EKLI  225 (350)
T ss_pred             HHHHHHHHHHHHcCcEEEEeccccccccCCC-CCchhhcC-cCCEEEEeecccccCCccccceeeecC--------HHHH
Confidence            9999999999999999999999998876543 22333332 358999999999999999999999874        4688


Q ss_pred             HHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          273 ERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       273 ~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++++..... ..+.+.+.|.++ ..++.+ .++++ .+++++++++.+.+.|+.. |+.+..|++|+|+|+++
T Consensus       226 ~~~~~~~~~~~~~~~~~~q~~~-~~~l~~-~~~~~~~r~~l~~~~~~~~~~l~~~-g~~~~~~~g~~~~~~~~  295 (350)
T TIGR03537       226 SFLRKLRANFGVASPDFVQAAA-KAAWSD-DNHVLERRKIFKRKRDLFIEFFNKV-GLEYLYPDATFYLWVKV  295 (350)
T ss_pred             HHHHHHHHhhccCCCHHHHHHH-HHHhCC-cHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeEEEEEEEC
Confidence            888876542 335555677776 455554 34444 8889999999999999988 78887899999999975

Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.

>PRK09082 methionine aminotransferase; Validated

Probab=100.00  E-value=1.5e-44  Score=333.61  Aligned_cols=294  Identities=22%  Similarity=0.340  Sum_probs=252.5

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a  112 (343)
                      ..++++|+.|.|+    +++++.+.+++++.+... ...|++..|.+++|+++++++.+.++...+++ +|++|+|++++
T Consensus        29 ~~~~i~l~~g~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~a  103 (386)
T PRK09082         29 EHGAINLSQGFPD----FDGPPYLVEALAYAMAAG-HNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEA  103 (386)
T ss_pred             hCCEEEecCCCCC----CCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHH
Confidence            3468999999965    566788999998887653 45899989999999999999998888777776 89999999999


Q ss_pred             HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       113 l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~  192 (343)
                      +..++.+++++||+|++++|+|..+...++..|.+++.++++. .++.+|++++++.++++++++++++||||||.+++.
T Consensus       104 l~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~  182 (386)
T PRK09082        104 LFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQP-PDFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWSA  182 (386)
T ss_pred             HHHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccccCCHHHHHHhcCccceEEEEeCCCCCCCcCCCH
Confidence            9999999999999999999999999999999999999999864 357899999999998889999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  271 (343)
                      +++++|+++|++||+++|+||+|.++.+++....++..+.. .+++++++||||.||++|+|+||++++        +++
T Consensus       183 ~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~--------~~l  254 (386)
T PRK09082        183 ADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAP--------AAL  254 (386)
T ss_pred             HHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCC--------HHH
Confidence            99999999999999999999999999987654444444433 468999999999999999999999985        478


Q ss_pred             HHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          272 VERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       272 ~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++.+++... ...+++.+.|.++ ..++.+..++++ .++.++++++.+.+.|++. |+.+..++||+|+|+++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~g~~~~~~~~  326 (386)
T PRK09082        255 SAEFRKVHQYNTFTVNTPAQLAL-ADYLRAEPEHYLELPAFYQAKRDRFRAALANS-RFKLLPCEGTYFQLVDY  326 (386)
T ss_pred             HHHHHHHHhhhcCCCChHHHHHH-HHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCeeEEEEEec
Confidence            888887754 3557888899888 666653334444 8889999999999999986 78887899999999874

>PRK08175 aminotransferase; Validated

Probab=100.00  E-value=3.4e-44  Score=332.26  Aligned_cols=293  Identities=20%  Similarity=0.315  Sum_probs=245.5

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a  112 (343)
                      +.++++|+.|.|+    ...++.+.+++.+.+.......|+++.|.++||+++++++.+++|..++++ ++++|+|++++
T Consensus        28 ~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~  103 (395)
T PRK08175         28 GEDIIDFSMGNPD----GPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEG  103 (395)
T ss_pred             CCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHH
Confidence            6789999999865    344666777777766555567899999999999999999998889888887 89999999999


Q ss_pred             HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc---CCceEEEEeCCCCCcccc
Q 019298          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD---QNTVALVIINPGNPCGNV  189 (343)
Q Consensus       113 l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~i~~~~p~nptG~~  189 (343)
                      +..++..++++||+|++++|+|+.+...++..|.+++.++++.++.   +.+++++.++   .+++++++++||||||.+
T Consensus       104 l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~---~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~  180 (395)
T PRK08175        104 LAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVD---FFNELERAIRESYPKPKMMILGFPSNPTAQC  180 (395)
T ss_pred             HHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCCC---cHHHHHHHHhhccCCceEEEEeCCCCCCCCC
Confidence            9999999999999999999999999888899999999998865433   4777877765   367899999999999999


Q ss_pred             cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCc
Q 019298          190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK  268 (343)
Q Consensus       190 ~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~  268 (343)
                      ++.+++++|+++|+++|+++|+||+|.++.+++....++..++. .+++++++||||.||++|+|+||++++        
T Consensus       181 ~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~--------  252 (395)
T PRK08175        181 VELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGN--------  252 (395)
T ss_pred             CCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCC--------
Confidence            99999999999999999999999999999887654444444432 357899999999999999999999974        


Q ss_pred             hHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          269 PKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       269 ~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +++++++++.... ..+++...|.++ ..+|.+...+++ .++.++++++.+.+.|+.+ |+.+..|++|+|+|+++
T Consensus       253 ~~l~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~~g~~i~i~l  327 (395)
T PRK08175        253 PELVSALARIKSYHDYGTFTPLQVAA-IAALEGDQQCVRDIAEQYKRRRDVLVKGLHEA-GWMVEMPKASMYVWAKI  327 (395)
T ss_pred             HHHHHHHHHHHhhcccCCCcHHHHHH-HHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCEEEEEEEEC
Confidence            4788888877543 445667778777 566665455555 7889999999999999998 78877899999999975

>PLN02376 1-aminocyclopropane-1-carboxylate synthase

Probab=100.00  E-value=1.8e-44  Score=340.05  Aligned_cols=300  Identities=20%  Similarity=0.315  Sum_probs=241.1

Q ss_pred             ccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHh----c-------CCCCCCCCCCCCHHHHHHHHHHHhhhCC-
Q 019298           28 VDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALL----S-------EKFNGYAPTAGLPLTRRAIAEYLSRDLP-   95 (343)
Q Consensus        28 ~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~----~-------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~-   95 (343)
                      ++...++.++|+|+.++..    + ..+.+.+.+++...    .       .....|++..|.++||+++|+|+++.+| 
T Consensus        39 y~~~~np~g~i~l~~aEN~----l-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~  113 (496)
T PLN02376         39 FHLSRNPHGIIQMGLAENQ----L-CLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGG  113 (496)
T ss_pred             CCcccCCCceEEeecchhh----h-hHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCC
Confidence            4444557789999999822    2 22333444333221    1       1344688889999999999999998877 


Q ss_pred             -CCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHH-hcCceeEEeecCCCCCCCCCHHHHHhhhc--
Q 019298           96 -YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA-FRHIEVRHFDLLPDKGWEVDLDDIESLAD--  171 (343)
Q Consensus        96 -~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--  171 (343)
                       ..+++++|++|+|+++++..+++++++|||.|++++|+|+.+...+. ..|.+++.++++.++++++|++.+++++.  
T Consensus       114 ~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a  193 (496)
T PLN02376        114 KVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKA  193 (496)
T ss_pred             CCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHH
Confidence             56899999999999999999999999999999999999999998777 58999999999776778999999976532  


Q ss_pred             ----CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccccc----CC----CCCEEE
Q 019298          172 ----QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF----GS----TVPILT  239 (343)
Q Consensus       172 ----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~----~~----~~~~i~  239 (343)
                          .+++++++++||||||.+++.+++++|+++|++|++++|+||+|..+.|.+..+.++..+    +.    .+++++
T Consensus       194 ~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~v  273 (496)
T PLN02376        194 QESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHI  273 (496)
T ss_pred             HhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEE
Confidence                367889999999999999999999999999999999999999999999877655554433    11    135788


Q ss_pred             EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhhHHHHH-----HHHHHHHH
Q 019298          240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-----HGNFLENF  314 (343)
Q Consensus       240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-----~~~~~~~~  314 (343)
                      ++||||.||++|+|+||+++++       +.+.+.++.... .+.++.+.|.++ ..+|.+ .+|++     .+++++++
T Consensus       274 v~S~SK~~glpGlRvG~li~~~-------~~l~~~~~~~~~-~~~vs~~~Q~a~-~~~L~d-~~~~~~~l~~~r~~l~~r  343 (496)
T PLN02376        274 VYSLSKDMGLPGFRVGIVYSFN-------DSVVSCARKMSS-FGLVSSQTQLML-ASMLSD-DQFVDNFLMESSRRLGIR  343 (496)
T ss_pred             EEeccccCCCCcceEEEEEECC-------HHHHHHHHHHhh-cCCCCHHHHHHH-HHHhCC-hhHHHHHHHHHHHHHHHH
Confidence            9999999999999999999864       346666555443 445788899988 777765 34432     68889999


Q ss_pred             HHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          315 AGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       315 ~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++.+.+.|++. |+.+..++||+|+|+++
T Consensus       344 ~~~l~~~L~~~-gi~~~~~~aG~flwi~l  371 (496)
T PLN02376        344 HKVFTTGIKKA-DIACLTSNAGLFAWMDL  371 (496)
T ss_pred             HHHHHHHHHHC-CCcccCCCceEEEEEEc
Confidence            99999999987 78887899999999985

>PRK07777 aminotransferase; Validated

Probab=100.00  E-value=7.4e-44  Score=329.40  Aligned_cols=294  Identities=27%  Similarity=0.390  Sum_probs=248.3

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHH
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAI  113 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al  113 (343)
                      .++++|+.|.|+    .+.++.+.+++.+.+... ...|+++.|.++||+++++++.+.+|...+++ +|++|+|+++++
T Consensus        24 ~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al   98 (387)
T PRK07777         24 TGAVNLGQGFPD----EDGPPEMLEAAQEAIAGG-VNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAI   98 (387)
T ss_pred             CCeEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHH
Confidence            478999999976    333566788888777653 36799989999999999999988888888776 799999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCC-CCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD-KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~  192 (343)
                      ..++..++++||+|+++.|+|..+...++..|.+++.++++++ +++.+|++++++.++++++++++++||||||.+++.
T Consensus        99 ~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~  178 (387)
T PRK07777         99 AAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHNPTGTVLTA  178 (387)
T ss_pred             HHHHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCCCCCccCCH
Confidence            9999999999999999999999999999999999999988765 467899999999988888999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  271 (343)
                      +++++|+++|+++++++|+||+|.++.+++....++..+.. .+++++++||||.|+++|+|+||++++        +++
T Consensus       179 ~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~--------~~l  250 (387)
T PRK07777        179 AELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGP--------APL  250 (387)
T ss_pred             HHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecC--------HHH
Confidence            99999999999999999999999999886654444444432 458999999999999999999999985        367


Q ss_pred             HHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          272 VERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       272 ~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +++++..... ....+.+.|.++ ..++.+...+++ .++.++++++.+.+.|+.+ |+.+..|+||+|+|+++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~g~~~~~~~~  322 (387)
T PRK07777        251 IAAVRAAKQYLTYVGGAPFQPAV-AHALDHEDAWVAALRDSLQAKRDRLAAGLAEA-GFEVHDSAGTYFLCADP  322 (387)
T ss_pred             HHHHHHHHhhcccCCCCHHHHHH-HHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC-CCCccCCCcceEEEecc
Confidence            8888766542 345566777776 555654456665 7889999999999999988 78887899999999863

>PRK07309 aromatic amino acid aminotransferase; Validated

Probab=100.00  E-value=8.7e-44  Score=328.99  Aligned_cols=292  Identities=23%  Similarity=0.398  Sum_probs=246.9

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEecChHHHH
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAI  113 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~al  113 (343)
                      ++.|+|+.|.|.    +++++.+.+++.++.... ...|++..|.++||+++++++.+.++..+.+ ++|++|+|+++++
T Consensus        30 ~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al  104 (391)
T PRK07309         30 PGILKLTLGEPD----FTTPDHVKEAAKRAIDAN-QSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEAL  104 (391)
T ss_pred             CCeEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH
Confidence            578999999965    566788899988877643 3579998999999999999999888887764 7999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC---CceEEEEeCCCCCccccc
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVY  190 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~~~~p~nptG~~~  190 (343)
                      ..++++++++||+|++++|+|..+...++..|.+++.++.+. +++.+|++.++++++.   +++++++++||||||.++
T Consensus       105 ~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~  183 (391)
T PRK07309        105 SASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTE-NDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTY  183 (391)
T ss_pred             HHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCC-cCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCc
Confidence            999999999999999999999999999999999999988753 4578999999998864   578999999999999999


Q ss_pred             CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchH
Q 019298          191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK  270 (343)
Q Consensus       191 ~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~  270 (343)
                      +.+++++|+++|++||+++|+|++|.++.+++....++..+. .+++++++||||.|+++|+|+||++++        ++
T Consensus       184 s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~g~~GlRvG~~v~~--------~~  254 (391)
T PRK07309        184 SREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYL-PDQTILINGLSKSHAMTGWRIGLIFAP--------AE  254 (391)
T ss_pred             CHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhc-cCCEEEEecChhhccCccceeEEEEeC--------HH
Confidence            999999999999999999999999999998654443443332 268999999999999999999999985        46


Q ss_pred             HHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHH-HHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          271 VVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIM-IHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       271 ~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l-~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +++++..... ...+++.+.|.++ ..+|++...+. ..+++++++++.+.+.|+.+ |+.+..|++|+|+|+++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~p~gg~~~~~~l  327 (391)
T PRK07309        255 FTAQLIKSHQYLVTAATTMAQFAA-VEALTNGKDDALPMKKEYIKRRDYIIEKMTDL-GFKIIKPDGAFYIFAKI  327 (391)
T ss_pred             HHHHHHHHHhhcccCCChHHHHHH-HHHHhCChhHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEEC
Confidence            8888876643 2456788888888 66676543333 37788999999999999988 78888899999999864

>PRK07324 transaminase; Validated

Probab=100.00  E-value=3e-44  Score=329.73  Aligned_cols=289  Identities=22%  Similarity=0.305  Sum_probs=246.9

Q ss_pred             ccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      -.+..+++|+.|+|+    ++.++.+ +++.+++....+ +|++..|.++||+++++++.     .+++++|++|+|+++
T Consensus        23 ~~~~~~~~~~~~e~~----~~~~~~~-~~~~~~~~~~~~-~Y~~~~G~~~lr~~ia~~~~-----~~~~~~vi~t~G~~~   91 (373)
T PRK07324         23 IAESCIDSLTLEELL----ALAGKNP-EAFYQELGQKKL-TYGWIEGSPEFKEAVASLYQ-----NVKPENILQTNGATG   91 (373)
T ss_pred             cccCCCCCCcHHHHH----hccCcch-HHHHHHHhcCCc-cCCCCCCCHHHHHHHHHHhc-----CCChhhEEEcCChHH
Confidence            347889999999975    5556666 777777766544 89999999999999999984     367899999999999


Q ss_pred             HHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccC
Q 019298          112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS  191 (343)
Q Consensus       112 al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~  191 (343)
                      ++..++.+++++||+|+++.|+|..+...++..|.+++.++++.++++.+|++++++.++++++++++++||||||.+++
T Consensus        92 al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~  171 (373)
T PRK07324         92 ANFLVLYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMD  171 (373)
T ss_pred             HHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999987778889999999988888999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (343)
Q Consensus       192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  271 (343)
                      .+++++|+++|++||+++|+||+|.++.+++. ..++..  ..+++|+++||||.|+++|+|+||++++        +++
T Consensus       172 ~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~-~~s~~~--~~~~~I~~~s~SK~~~~~G~RiG~i~~~--------~~l  240 (373)
T PRK07324        172 RAYLEEIVEIARSVDAYVLSDEVYRPLDEDGS-TPSIAD--LYEKGISTNSMSKTYSLPGIRVGWIAAN--------EEV  240 (373)
T ss_pred             HHHHHHHHHHHHHCCCEEEEEccccccccCCC-CCChhh--ccCCEEEEecchhhcCCccceeEEEecC--------HHH
Confidence            99999999999999999999999999887643 223322  2357899999999999999999999984        468


Q ss_pred             HHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          272 VERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       272 ~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++++++.... ..+.+.+.|.++ ..+|++...+++ .++.++++++.+.+.|.+.+++.+..|++|+|+|+++
T Consensus       241 i~~~~~~~~~~~~~~~~~~q~~a-~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~  313 (373)
T PRK07324        241 IDILRKYRDYTMICAGVFDDMLA-SLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKL  313 (373)
T ss_pred             HHHHHHHhCcEEecCChHHHHHH-HHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEe
Confidence            8888887653 456778888877 666766556666 7888899999999999888788878999999888754

>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed

Probab=100.00  E-value=2e-43  Score=323.93  Aligned_cols=306  Identities=23%  Similarity=0.298  Sum_probs=247.5

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~   80 (343)
                      |++|+|....+..  .+..+......      ++.+.++|+.|.|.    .+.++.+.+++++...   ..+|+++.|.+
T Consensus         1 ~~~~~~~~~~~~~--~~~~~~~~~~~------~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~---~~~Y~~~~G~~   65 (364)
T PRK07865          1 MPVSARLPDFPWD--TLAPAKATAAA------HPDGIVDLSVGTPV----DPVPPVIQEALAAAAD---APGYPTTAGTP   65 (364)
T ss_pred             CCccccCCCccHH--HHHHHHHHHHh------cCCCEEEcCCCCCC----CCCCHHHHHHHHHHHh---hCCCCCccCCH
Confidence            7899999988866  55555443322      25678999999864    4557888888877643   24899989999


Q ss_pred             HHHHHHHHHHhhhCCCC-CCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCC
Q 019298           81 LTRRAIAEYLSRDLPYK-LTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG  158 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~-~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  158 (343)
                      ++|+++++|+.+++|.. +++++|++|+|+++++..++..+ +++||.|++++|+|+.+...++..|.++..++      
T Consensus        66 ~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~------  139 (364)
T PRK07865         66 ELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRAD------  139 (364)
T ss_pred             HHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecC------
Confidence            99999999999988886 99999999999999999988888 69999999999999999999999999888763      


Q ss_pred             CCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccccc---CCCC
Q 019298          159 WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF---GSTV  235 (343)
Q Consensus       159 ~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~---~~~~  235 (343)
                         ++++++.   .+++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++.....+...   ...+
T Consensus       140 ---~~~~l~~---~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~  213 (364)
T PRK07865        140 ---SLTELGP---QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHT  213 (364)
T ss_pred             ---ChhhCCc---ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccc
Confidence               1233322   467899999999999999999999999999999999999999999988765322221110   1235


Q ss_pred             CEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHHHHHHHHHH
Q 019298          236 PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENF  314 (343)
Q Consensus       236 ~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~  314 (343)
                      ++|+++||||.|+++|+|+||++++        ++++++++.... ...+++.+.|.++ ..+|.+...+.+.++.++++
T Consensus       214 ~~i~~~S~SK~~~~~GlRiG~i~~~--------~~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~  284 (364)
T PRK07865        214 GLLAVHSLSKQSNLAGYRAGFVAGD--------PALVAELLEVRKHAGMMVPAPVQAAM-VAALGDDAHVREQRERYARR  284 (364)
T ss_pred             eEEEEeechhccCCCceeeEEEecC--------HHHHHHHHHHHHhcCCCcCHHHHHHH-HHHhCCHHHHHHHHHHHHHH
Confidence            8999999999999999999999884        468888877653 3457788888888 66776533333488899999


Q ss_pred             HHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          315 AGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       315 ~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++.+.+.|++. |+.+..|++|+|+|+++
T Consensus       285 ~~~l~~~L~~~-g~~~~~~~~~~~~~~~~  312 (364)
T PRK07865        285 RAVLRPALEAA-GFRVDHSEAGLYLWATR  312 (364)
T ss_pred             HHHHHHHHHHc-CCcccCCCccEEEEEeC
Confidence            99999999987 78877899999999864

>PRK05839 hypothetical protein; Provisional

Probab=100.00  E-value=3.2e-43  Score=323.24  Aligned_cols=284  Identities=20%  Similarity=0.266  Sum_probs=233.5

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      +.++++|+.|+|.    +++++.+.+++.+...  ....|+++.|.++||+++++++++++|.++++++|++|+|+++++
T Consensus        23 ~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al   96 (374)
T PRK05839         23 EYKGLDLTIGEPQ----FETPKFIQDALKNNAH--LLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVL   96 (374)
T ss_pred             CCCeEEcCCCCCC----CCCCHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHH
Confidence            5699999999965    6677888888887653  356899999999999999999999889889999999999999999


Q ss_pred             HHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccC
Q 019298          114 DVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS  191 (343)
Q Consensus       114 ~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~  191 (343)
                      ..++..++  .+||.|++++|+|+.|...++..|.+++.++++.++++.+|++..+  + ++++++++++||||||.+++
T Consensus        97 ~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~~~k~v~i~nP~NPTG~~~s  173 (374)
T PRK05839         97 FNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-QEVDLVILNSPNNPTGRTLS  173 (374)
T ss_pred             HHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-ccccEEEEeCCCCCcCcccC
Confidence            99888764  5789999999999999999999999999999977777777765543  2 36899999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccccc------CCCCCEEEEccCccccCCCCCcEEEEEEeCCCCC
Q 019298          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF------GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGM  265 (343)
Q Consensus       192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~------~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~  265 (343)
                      .+++++|+++|+++|+++|+||+|.++.+++. ..++...      ...+++|+++||||.|+++|+|+||++++     
T Consensus       174 ~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~-~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~-----  247 (374)
T PRK05839        174 LEELIEWVKLALKHDFILINDECYSEIYENTP-PPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGD-----  247 (374)
T ss_pred             HHHHHHHHHHHHHcCCEEEeccchhhcccCCC-CCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecC-----
Confidence            99999999999999999999999999865432 2222211      13368999999999999999999999984     


Q ss_pred             CCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          266 FRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       266 ~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                         ++++++++.... ...+.+...|.++ ..++.+ .++++ .+++++++++.+.+.|    ++.  .|++|+|+|+++
T Consensus       248 ---~~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~-~~~~~~~~~~~~~~~~~~~~~l----~~~--~p~gg~fi~~~~  316 (374)
T PRK05839        248 ---ASILKKYKAYRTYLGCASPLPLQKAA-AVAWLD-DEHAEFFRNIYAKNLKLAREIL----GIT--IPPATFYVWLPV  316 (374)
T ss_pred             ---HHHHHHHHHHHhhcCCCCChHHHHHH-HHHhcc-chHHHHHHHHHHHHHHHHHHhc----CCC--CCCeeEEEEEeC
Confidence               468888877653 2456777888877 545554 44554 7888999998887765    222  789999999975

>PRK02610 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.7e-43  Score=325.18  Aligned_cols=285  Identities=20%  Similarity=0.274  Sum_probs=237.6

Q ss_pred             ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHHHHHHhhhC--CCCCCCCcEEEecChHHH
Q 019298           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-FNGYAPTAGLPLTRRAIAEYLSRDL--PYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~--~~~~~~~~i~~~~g~~~a  112 (343)
                      +.++|+.|+|    .+++++.+.+++.+++.... ...|++ .|.++||+++++|+++++  ++.+++++|++|+|++++
T Consensus        29 ~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~a  103 (374)
T PRK02610         29 QLDRLDTNEF----PYDLPPDLKQKLAWLYQQGIESNRYPD-GGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDEL  103 (374)
T ss_pred             ceeEecCCCC----CCCCCHHHHHHHHHHHhhcccccCCCC-CchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHH
Confidence            5799999994    48889999999998876542 457965 699999999999998766  466899999999999999


Q ss_pred             HHHHHHHhcCCCC-eEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc----CCceEEEEeCCCCCcc
Q 019298          113 IDVAMALLSRPGA-NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD----QNTVALVIINPGNPCG  187 (343)
Q Consensus       113 l~~~~~~l~~~gd-~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~i~~~~p~nptG  187 (343)
                      |..++.+++.+|| +|++++|+|..|...++..|.+++.++++. +++++|+++++++++    ++++++++++||||||
T Consensus       104 l~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG  182 (374)
T PRK02610        104 IRSLLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDP-ETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTG  182 (374)
T ss_pred             HHHHHHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCc-ccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCC
Confidence            9988888777886 899999999999999999999999998753 458899999999886    4789999999999999


Q ss_pred             cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCC
Q 019298          188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR  267 (343)
Q Consensus       188 ~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~  267 (343)
                      .+++.++++++.++|  +++++|+||+|.+|.+..    .+..+...+++|+++||||+||++|+|+||++++       
T Consensus       183 ~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~----~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~-------  249 (374)
T PRK02610        183 NPLTAAELEWLRSLP--EDILVVIDEAYFEFSQTT----LVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGH-------  249 (374)
T ss_pred             CCCCHHHHHHHHhcc--CCcEEEEeccccccCccc----hHHHHhcCCCEEEEEecchhccCcccceeeeecC-------
Confidence            999999999999987  389999999999886321    1222334457899999999999999999999984       


Q ss_pred             chHHHHHHhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          268 KPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       268 ~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                       +++++.+.+... .++.+.+.|.++ ..++.+...+.+..+.+.++++.+.+.|+.++++.+ .|++|+|+|+++
T Consensus       250 -~~l~~~l~~~~~-~~~~~~~~q~a~-~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~p~~g~f~~~~l  321 (374)
T PRK02610        250 -PELIAVLEKVRL-PYNLPSFSQLAA-QLALEHRQELLAAIPEILQERDRLYQALQELPQLRV-WPSAANFLYLRL  321 (374)
T ss_pred             -HHHHHHHHHhcC-CCCCCHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEe-CCCcceEEEEeC
Confidence             468888877663 456788899888 777777667777555556668888899988878775 689999999975

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=100.00  E-value=2.9e-43  Score=329.12  Aligned_cols=295  Identities=25%  Similarity=0.358  Sum_probs=253.6

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--C-CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--K-FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  110 (343)
                      ....++|+.|.|+.  .+.+...+.+.+.+.++..  . ...|.++.|.++||+.+++++...+|+.+.+++|++|+|++
T Consensus        88 ~~~~i~f~~g~p~~--~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q  165 (459)
T COG1167          88 DPSVIDFAGGLPDP--SLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQ  165 (459)
T ss_pred             CCceecCCCCCCCc--ccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHH
Confidence            37889999999763  3556778888888877532  2 56888889999999999999997799999999999999999


Q ss_pred             HHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEe-CCCCCccc
Q 019298          111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVII-NPGNPCGN  188 (343)
Q Consensus       111 ~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~-~p~nptG~  188 (343)
                      ++++.+++.+++|||+|++.+|+|......++..|.+++.++++   +.++|+|+|++.++. ++++++++ +-|||||.
T Consensus       166 ~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d---~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~  242 (459)
T COG1167         166 QALDLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVD---EDGIDPEALEEALAQWKPKAVYVTPTFQNPTGV  242 (459)
T ss_pred             HHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCC---CCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCC
Confidence            99999999999999999999999999999999999999999985   346999999999876 45555443 33899999


Q ss_pred             ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCc
Q 019298          189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK  268 (343)
Q Consensus       189 ~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~  268 (343)
                      +||.+..++|+++|++||++||+||.|+.+.+++.+.+++..++..++||+++||||+ .+||+|+||++++.       
T Consensus       243 tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~-l~PglRlG~vv~p~-------  314 (459)
T COG1167         243 TMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKT-LAPGLRLGYVVAPP-------  314 (459)
T ss_pred             ccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhh-cccccceeeeeCCH-------
Confidence            9999999999999999999999999999999998877778888888999999999999 68999999999963       


Q ss_pred             hHHHHHHhhhhc-cccCcchHHHHHHHhccchh--hHHHHH-HHHHHHHHHHHHHHhhcCC-C-CceeeCCCCceEeeec
Q 019298          269 PKVVERMKKYFD-ILGDPATFIQVCIMYGCLST--IMQIMI-HGNFLENFAGSCVPSYKLI-P-ELINFKSTGSSLKYLD  342 (343)
Q Consensus       269 ~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~--~~~~l~-~~~~~~~~~~~~~~~L~~~-~-g~~~~~~~~g~~~~~~  342 (343)
                       ++++++..... ...+++.+.|.++ +..+.+  ..++++ +++.++++++.+.+.|.+. | +..+..|+||+|+|++
T Consensus       315 -~~~~~~~~~k~~~~~~~s~~~Q~~l-a~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~  392 (459)
T COG1167         315 -ELIEKLLRLKQAADLGPSSLSQAAL-AAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLE  392 (459)
T ss_pred             -HHHHHHHHHHHHhcCCCChHHHHHH-HHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEE
Confidence             68888887754 3668899999888 444443  233333 9999999999999999984 4 4558899999999997


Q ss_pred             C
Q 019298          343 L  343 (343)
Q Consensus       343 l  343 (343)
                      |
T Consensus       393 l  393 (459)
T COG1167         393 L  393 (459)
T ss_pred             c
Confidence            5

>PLN02397 aspartate transaminase

Probab=100.00  E-value=4.6e-43  Score=326.31  Aligned_cols=321  Identities=15%  Similarity=0.141  Sum_probs=232.4

Q ss_pred             cccCcCccccHHHHHHHHHhhccccccccceeEeccCC-CCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHH
Q 019298            7 GIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGD-PTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRA   85 (343)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~   85 (343)
                      ....+.+  ++..+...+..+.     +...++|+.|. |+........+.+.++....+..+...+|++..|.++||++
T Consensus        27 ~~~~~~~--~i~~~~~~~~~~~-----~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~a   99 (423)
T PLN02397         27 VEPAPPD--PILGVTEAFLADP-----SPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKL   99 (423)
T ss_pred             CCcCCCC--hHHHHHHHHhhCC-----CcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHH
Confidence            3344444  6777777665443     56789999997 44211111245666665554444445589999999999999


Q ss_pred             HHHHHhhhCCCCCCCCcEEE--ecChHHH--HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCC
Q 019298           86 IAEYLSRDLPYKLTPNDVFV--TSGCTQA--IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEV  161 (343)
Q Consensus        86 ia~~~~~~~~~~~~~~~i~~--~~g~~~a--l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  161 (343)
                      +++++.+......++++|..  +.+++++  +...+..++.|||+|++++|+|+.|...++..|++++.+++..++++++
T Consensus       100 ia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~  179 (423)
T PLN02397        100 SAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGL  179 (423)
T ss_pred             HHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCcc
Confidence            99999654333333344421  2333333  3333444456999999999999999999999999999998854455889


Q ss_pred             CHHHHHhhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC--CCCcccccC-CCC
Q 019298          162 DLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK--PFVPMGVFG-STV  235 (343)
Q Consensus       162 d~~~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~--~~~~~~~~~-~~~  235 (343)
                      |++.+++.+.   .+++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++.  ...++..+. ..+
T Consensus       180 d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~  259 (423)
T PLN02397        180 DFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGH  259 (423)
T ss_pred             CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCC
Confidence            9998887765   3567788899999999999999999999999999999999999999998651  222333332 224


Q ss_pred             CEEEEccCccccCCCCCcEEEEE--EeCCCCCCCchHHHH----HHhhhhc-cccCcchHHHHHHHhccchhhH---HH-
Q 019298          236 PILTLGSLSKRWIVPGWRLGWFV--TTDPCGMFRKPKVVE----RMKKYFD-ILGDPATFIQVCIMYGCLSTIM---QI-  304 (343)
Q Consensus       236 ~~i~~~S~sK~~~~~G~r~G~i~--~~~~~~~~~~~~~~~----~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~---~~-  304 (343)
                      ++|+++||||+|+++|+|+||++  +++       +++++    .+++... ...+++.+.|.++ ..+|++..   +| 
T Consensus       260 ~vI~~~SfSK~~~~~G~RvG~~v~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~-~~~L~~~~~~~~~~  331 (423)
T PLN02397        260 EILVAQSYAKNMGLYGERVGALSVVCKS-------ADVAVRVKSQLKLIARPMYSNPPIHGASIV-ATILGDPELFSEWT  331 (423)
T ss_pred             cEEEEEECcccCCCccccceEEEEEeCC-------HHHHHHHHHHHHHHHhcccCCCcHHHHHHH-HHHhCCHHHHHHHH
Confidence            79999999999999999999986  322       23333    4444432 2446677888887 67777632   34 


Q ss_pred             --HH-HHHHHHHHHHHHHHhhcCCCC----ceeeCCCCceEeeecC
Q 019298          305 --MI-HGNFLENFAGSCVPSYKLIPE----LINFKSTGSSLKYLDL  343 (343)
Q Consensus       305 --l~-~~~~~~~~~~~~~~~L~~~~g----~~~~~~~~g~~~~~~l  343 (343)
                        ++ .+++++++|+.+.+.|+++ |    +.+..|+||+|+|+++
T Consensus       332 ~~~~~~~~~~~~rr~~l~~~L~~~-~~~~~~~~~~p~gg~fl~~~l  376 (423)
T PLN02397        332 KELKGMADRIISMRQKLYDALEAR-GSPGDWSHITKQIGMFSFTGL  376 (423)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCcccCCceEEEecCC
Confidence              32 7889999999999999988 5    7777899999999975

>PRK01533 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=2.2e-43  Score=322.72  Aligned_cols=280  Identities=20%  Similarity=0.278  Sum_probs=236.7

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      ..++|+|+.|+    +++++++.+++++.+.+..  ...|+ ..|.++||+++++++      ++++++|++|+|++++|
T Consensus        28 ~~~~i~l~~ne----n~~~~~~~v~~a~~~~~~~--~~~Yp-~~g~~~Lr~aia~~~------~~~~~~I~vt~Gs~e~i   94 (366)
T PRK01533         28 DHSFVKLASNE----NPFGCSPRVLDELQKSWLD--HALYP-DGGATTLRQTIANKL------HVKMEQVLCGSGLDEVI   94 (366)
T ss_pred             CCceEEeCCCC----CCCCCCHHHHHHHHHHHHh--cCcCC-CCCHHHHHHHHHHHh------CCCcceEEECCCHHHHH
Confidence            56789999999    4588999999999887654  24575 478999999999998      57899999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~  193 (343)
                      ..++++++++||+|++++|+|+.|...++..|.+++.++++   ++.+|+++++++++++++++++|+||||||.+++.+
T Consensus        95 ~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~---~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~~  171 (366)
T PRK01533         95 QIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN---NGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDR  171 (366)
T ss_pred             HHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC---CCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCHH
Confidence            99999999999999999999999999999999999999873   346999999999888899999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  273 (343)
                      ++++|+++|++++ ++|+||+|.++.+.+.....+..+...+++|+++||||.|+++|+|+||++++        +++++
T Consensus       172 ~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~--------~~~~~  242 (366)
T PRK01533        172 KLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGH--------EELIE  242 (366)
T ss_pred             HHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCC--------HHHHH
Confidence            9999999998876 67789999988765432222333445578999999999999999999999884        47888


Q ss_pred             HHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++++... .++++.++|.++ .++|.+ .+|.+ .++.++++++++.+.++.+ |+.+.. .+|+|+|+++
T Consensus       243 ~l~~~~~-~~~~~~~~q~aa-~~~l~~-~~~~~~~~~~~~~~r~~~~~~l~~~-g~~~~~-~~~nf~~~~~  308 (366)
T PRK01533        243 KLNVVRL-PFNVSSLAQKAA-TIAFGD-DEFIEEIVRVNTEGLRQYESFCKEN-EIPFYQ-SQTNFIFLPV  308 (366)
T ss_pred             HHHHhcC-CCCcCHHHHHHH-HHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhC-CCccCC-CcCcEEEEeC
Confidence            8887764 568899999999 777765 56665 7778888888888888888 787744 4688999874

>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase

Probab=100.00  E-value=4.4e-42  Score=318.76  Aligned_cols=287  Identities=19%  Similarity=0.277  Sum_probs=229.0

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE----KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~  109 (343)
                      +.++++|+.|+|.    +++++.+.+++.+.+.+.    ...+|.|..|.++||+++|+++.+   ..+++++|++|+|+
T Consensus        32 ~~~~i~l~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~---~~~~~d~I~it~Ga  104 (402)
T TIGR03542        32 SADIIRLGIGDTT----QPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYR---GRIDPEEIFISDGA  104 (402)
T ss_pred             CCCeEEcCCCCCC----CCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHh---cCCCHHHEEECCCc
Confidence            5788999999954    677888999988887642    345798889999999999998733   24789999999999


Q ss_pred             HHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCc-----------eeEEeecCCCCCCCCCHHHHHhhhcCCceEEE
Q 019298          110 TQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHI-----------EVRHFDLLPDKGWEVDLDDIESLADQNTVALV  178 (343)
Q Consensus       110 ~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~-----------~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~  178 (343)
                      ++++..++ .++.+||+|++++|+|..|...++..|.           +++.++.+.++++.+|++.     ..++++++
T Consensus       105 ~~al~~l~-~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~i~  178 (402)
T TIGR03542       105 KCDVFRLQ-SLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE-----EPKIDIIY  178 (402)
T ss_pred             HHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc-----cCCceEEE
Confidence            99999865 5568999999999999999999999999           8888887655566555432     14679999


Q ss_pred             EeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEE
Q 019298          179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWF  257 (343)
Q Consensus       179 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i  257 (343)
                      +++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++..+.++..++. .+++|+++||||.||++|+|+||+
T Consensus       179 l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~  258 (402)
T TIGR03542       179 LCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWT  258 (402)
T ss_pred             EeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEE
Confidence            9999999999999999999999999999999999999999876543334444443 357999999999999999999999


Q ss_pred             EEeCCCCCCCchHHH--------HHHhhhh-ccccCcchHHHHHHHhccchhh-HHHH-HHHHHHHHHHHHHHHhhcCCC
Q 019298          258 VTTDPCGMFRKPKVV--------ERMKKYF-DILGDPATFIQVCIMYGCLSTI-MQIM-IHGNFLENFAGSCVPSYKLIP  326 (343)
Q Consensus       258 ~~~~~~~~~~~~~~~--------~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~-~~~l-~~~~~~~~~~~~~~~~L~~~~  326 (343)
                      +++.        +++        +.+.... ....+++.+.|.++ ..++.+. ..+. +.++.++++++.+.+.|++. 
T Consensus       259 i~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-  328 (402)
T TIGR03542       259 VVPK--------ELTYADGHSVIQDWERRQCTKFNGASYPVQRAA-EAAYAGEGLQPILEAISYYMENARILRKALEAA-  328 (402)
T ss_pred             EecH--------HHhhcchhhHHHHHHHHhhhcccCCCHHHHHHH-HHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-
Confidence            9964        343        2222222 22345788888887 6666542 2233 36788899999999999987 


Q ss_pred             CceeeCCCCceEeeecC
Q 019298          327 ELINFKSTGSSLKYLDL  343 (343)
Q Consensus       327 g~~~~~~~~g~~~~~~l  343 (343)
                      |+.+..|++|+|+|+++
T Consensus       329 ~~~~~~~~~~~f~~v~l  345 (402)
T TIGR03542       329 GFKVYGGEHAPYLWVKT  345 (402)
T ss_pred             CceecCCCceeEEEEEC
Confidence            78877788999999975

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

>PRK06358 threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=2e-42  Score=315.65  Aligned_cols=282  Identities=16%  Similarity=0.276  Sum_probs=235.6

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~  114 (343)
                      ..+++|+.+.+.    .++++.+.+++.+.+..  ..+|++. +.++||+++++|+      ++++++|++|+|+++++.
T Consensus        19 ~~~~~l~~~~~~----~~~p~~~~~a~~~~~~~--~~~Y~~~-~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~l~   85 (354)
T PRK06358         19 NMILDFSANINP----LGVPESLKQAITENLDK--LVEYPDP-DYLELRKRIASFE------QLDLENVILGNGATELIF   85 (354)
T ss_pred             cceEEecCCCCC----CCCCHHHHHHHHHHHHh--hhcCCCc-cHHHHHHHHHHHh------CCChhhEEECCCHHHHHH
Confidence            347999999843    56688999999887653  5579764 6899999999998      579999999999999999


Q ss_pred             HHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298          115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (343)
Q Consensus       115 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~  194 (343)
                      .+++++ .+ +.|++++|+|+.|...++..|.+++.++++.++++.+| +++++.+..+++++++++||||||.+++.++
T Consensus        86 ~~~~~~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~  162 (354)
T PRK06358         86 NIVKVT-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLISKEE  162 (354)
T ss_pred             HHHHHh-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCCccCHHH
Confidence            999887 44 68999999999999999999999999998766778899 6666666667899999999999999999999


Q ss_pred             HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (343)
Q Consensus       195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~  274 (343)
                      +++|+++|+++++++|+||+|.++.+++.....+...+..+++|+++||||.||++|+|+||+++++       +.++++
T Consensus       163 ~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~-------~~~~~~  235 (354)
T PRK06358        163 MKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSN-------KNLAEK  235 (354)
T ss_pred             HHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCC-------HHHHHH
Confidence            9999999999999999999999998876533334445556799999999999999999999999853       357788


Q ss_pred             HhhhhccccCcchHHHHHHHhccchhhHHHH-HHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          275 MKKYFDILGDPATFIQVCIMYGCLSTIMQIM-IHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       275 l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l-~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +..... .++++.+.|.++ ..+|++ .+++ +.++.++++++.+.+.|++++|+.+..|+ |.|+|+++
T Consensus       236 ~~~~~~-~~~~~~~~q~~~-~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~-g~f~~~~~  301 (354)
T PRK06358        236 LLQMRE-PWSINTFADLAG-QTLLDD-KEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPS-VNFIFFKL  301 (354)
T ss_pred             HHHhCC-CCcchHHHHHHH-HHHhcc-HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCc-ceEEEEEc
Confidence            877665 467788888888 777765 3454 48888999999999999988888776665 55899874

>PRK15481 transcriptional regulatory protein PtsJ; Provisional

Probab=100.00  E-value=1.6e-42  Score=324.50  Aligned_cols=284  Identities=17%  Similarity=0.181  Sum_probs=235.7

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      +...++|+.|.|.    .+++|.+.+++.+....  ...|+++.|.++||+++++++.+..+   .+++|++|+|++++|
T Consensus        84 ~~~~i~L~~g~p~----~~~~p~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iiit~G~~~al  154 (431)
T PRK15481         84 GTPLHDLAGGNPD----PQRLPDLSRYFARLSRT--PRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDLTSGAIDAI  154 (431)
T ss_pred             cchhhhhhcCCCC----hhHhHHHHHHHHHhhhh--hhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEEecCcHHHH
Confidence            3467899999854    44556677877776543  35799999999999999999975322   356999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEe-CCCCCcccccCH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII-NPGNPCGNVYSY  192 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~-~p~nptG~~~~~  192 (343)
                      ..++++++++||.|++++|+|+.|...++..|++++.++++.+   ++|++.+++++++++++++++ +||||||.+++.
T Consensus       155 ~~~~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~---g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~  231 (431)
T PRK15481        155 ERLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAE---GMQPEKLERALAQGARAVILTPRAHNPTGCSLSA  231 (431)
T ss_pred             HHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCC---CCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCH
Confidence            9999999999999999999999999999999999999988532   489999999887788888887 999999999999


Q ss_pred             HHHHHHHHHHhhc-CcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298          193 QHLQKLAETANKL-KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (343)
Q Consensus       193 ~~l~~l~~~~~~~-~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  271 (343)
                      +++++|+++|+++ ++++|+||+|.++.+.+. ...+ .. ..+++|+++||||+|+ +|+|+||++++        +++
T Consensus       232 ~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~-~~~~-~~-~~~~vi~~~SfSK~~~-~GlRiG~~i~~--------~~~  299 (431)
T PRK15481        232 RRAAALRNLLARYPQVLVIIDDHFALLSSSPY-HSVI-PQ-TTQRWALIRSVSKALG-PDLRLAFVASD--------SAT  299 (431)
T ss_pred             HHHHHHHHHHHhcCCceEEecCchhhhccCCC-CCCC-cC-CCCCEEEEeeeccccC-CCceeEEEeCC--------HHH
Confidence            9999999999999 999999999999976432 1122 11 2358999999999999 99999999985        468


Q ss_pred             HHHHhhhhcc-ccCcchHHHHHHHhccchhh--HHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          272 VERMKKYFDI-LGDPATFIQVCIMYGCLSTI--MQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       272 ~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~--~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++++...... ..+++.+.|.++ ..+|++.  .++++ .++.++++++.+.+.|++. |+.+..|++|+|+|+++
T Consensus       300 ~~~~~~~~~~~~~~~s~~~q~a~-~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~~~~p~gg~f~~~~l  373 (431)
T PRK15481        300 SARLRLRLNSGTQWVSHLLQDLV-YACLTDPEYQARLAQARLFYAQRRQKLARALQQY-GIAIPSPGDGLNLWLPL  373 (431)
T ss_pred             HHHHHHHHhccccCCCHHHHHHH-HHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCeEEEEEEC
Confidence            8888765432 356788999999 7777763  23444 8999999999999999988 78877899999999975

>PRK06836 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.2e-41  Score=314.92  Aligned_cols=324  Identities=23%  Similarity=0.306  Sum_probs=254.0

Q ss_pred             cCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHH
Q 019298            4 SNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPL   81 (343)
Q Consensus         4 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~   81 (343)
                      |.......+....++.++..... ..++.+...+++|+.|.|+    +++++.+.+++.+.+...  ....|++..|.++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~g~p~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~   77 (394)
T PRK06836          3 SEKIKGLLEKSSWIRKMFEEGAR-LKAEYGADNVFDFSLGNPS----VPPPAAVKEALRELAEEEDPGLHGYMPNAGYPE   77 (394)
T ss_pred             chHHHHHHhcccHHHHHHHHHHH-HHhhcCCCCeEEecCcCCC----CCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHH
Confidence            44444555554556666554332 1111234678999999854    567889999998877642  2568988899999


Q ss_pred             HHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCC
Q 019298           82 TRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEV  161 (343)
Q Consensus        82 lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  161 (343)
                      +|+++++++.+.++.++++++|++|+|+++++..+++.++++||.|++++|+|..+...++..|.+++.++++++ ++++
T Consensus        78 lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~-~~~~  156 (394)
T PRK06836         78 VREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTD-TFQP  156 (394)
T ss_pred             HHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCc-cCcC
Confidence            999999999988888899999999999999999999999999999999999999999999999999999998653 4789


Q ss_pred             CHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhh------cCcEEEEccCCCccccCCCCCCcccccCCCC
Q 019298          162 DLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK------LKTLVIADEVYGHLVFGDKPFVPMGVFGSTV  235 (343)
Q Consensus       162 d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~------~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~  235 (343)
                      |+++++++++++++++++++|+||||.+++.+++++|+++|++      ||+++|+||+|.++.+++.....+.  ...+
T Consensus       157 d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~--~~~~  234 (394)
T PRK06836        157 DLDALEAAITPKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIF--KYYD  234 (394)
T ss_pred             CHHHHHhhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChH--HccC
Confidence            9999999998889999999999999999999999999999999      8999999999999988754333322  2245


Q ss_pred             CEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc--ccCcchHHHHHHHhccchhhHHHHHHHHHHHH
Q 019298          236 PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI--LGDPATFIQVCIMYGCLSTIMQIMIHGNFLEN  313 (343)
Q Consensus       236 ~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~  313 (343)
                      ++++++||||.|+++|+|+||+++++....  -..++..+......  ..+++.+.|.++ ..++.+.    ..++.+++
T Consensus       235 ~~i~~~S~SK~~~~pGlRiG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~----~~~~~~~~  307 (394)
T PRK06836        235 NSIVVYSFSKSLSLPGERIGYIAVNPEMED--ADDLVAALVFANRILGFVNAPALMQRVV-AKCLDAT----VDVSIYKR  307 (394)
T ss_pred             cEEEEecchhhccCcceeeEEEecCHHHhh--hHHHHHHHHHHhhccccccCCHHHHHHH-HHHhCCh----HHHHHHHH
Confidence            899999999999999999999998642100  00112222222221  246778888888 4444431    14677889


Q ss_pred             HHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          314 FAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       314 ~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +++.+.+.|+++ |+.+..|++|+|+|+++
T Consensus       308 ~r~~l~~~L~~~-g~~~~~~~gg~~~~~~~  336 (394)
T PRK06836        308 NRDLLYDGLTEL-GFECVKPQGAFYLFPKS  336 (394)
T ss_pred             HHHHHHHHHHhC-CCEeecCCceEEEEEeC
Confidence            999999999988 78888899999999864

>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=100.00  E-value=9.8e-43  Score=319.63  Aligned_cols=297  Identities=29%  Similarity=0.471  Sum_probs=249.8

Q ss_pred             ceeEeccCCCCCCCCCCCcHHHHHHHHH-HHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHH
Q 019298           36 KVISLAMGDPTVHSCFHTTHVATEAVAE-ALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAI  113 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al  113 (343)
                      ++|||+.|++......++++++.+++.+ .........|+++.|.++||+++++|+++..+..++++ +|++++|+++++
T Consensus         2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~   81 (363)
T PF00155_consen    2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL   81 (363)
T ss_dssp             TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred             CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence            5799999996633222355666666655 33445677999999999999999999997788888999 999999999999


Q ss_pred             HHHHHHh-cCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCCCc
Q 019298          114 DVAMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPC  186 (343)
Q Consensus       114 ~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~npt  186 (343)
                      ..++..+ .++||+|++++|+|+.+...++..|.+++.+++..++++.+|+++|++.+++      +++++++++|||||
T Consensus        82 ~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPt  161 (363)
T PF00155_consen   82 FLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPT  161 (363)
T ss_dssp             HHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTT
T ss_pred             hhhhhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccccccc
Confidence            9999999 7899999999999999999999999999999988778899999999998887      56899999999999


Q ss_pred             ccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCc-ccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCC
Q 019298          187 GNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGM  265 (343)
Q Consensus       187 G~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~-~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~  265 (343)
                      |.+++.+++++|+++|+++|+++|+||+|..+.++.....+ ...+....++++++|+||+||++|+|+||++++     
T Consensus       162 G~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~-----  236 (363)
T PF00155_consen  162 GSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAP-----  236 (363)
T ss_dssp             TBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEE-----
T ss_pred             ccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccch-----
Confidence            99999999999999999999999999999999988654333 344555567999999999999999999999995     


Q ss_pred             CCchHHHHHHhhhhccccCcchHHHHHHHhccchhhHH---HHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeee
Q 019298          266 FRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQ---IMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYL  341 (343)
Q Consensus       266 ~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~---~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~  341 (343)
                         +++++.++........ +.+.|.++ ..++.+...   +++ .+++++++++.+.+.|++. |+.+..+++|+|+|+
T Consensus       237 ---~~~~~~l~~~~~~~~~-~~~~~~~~-~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~  310 (363)
T PF00155_consen  237 ---PELIERLRRFQRSGLS-SSPMQAAA-AAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVLPPEAGFFLWV  310 (363)
T ss_dssp             ---HHHHHHHHHHHHHTTS-SHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHSBSSEEEE
T ss_pred             ---hhhhhhhhhccccccc-cchhhHHH-HHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhheeeccCccEEEE
Confidence               4788888887653333 77777777 566665442   444 9999999999999999988 899888899999998


Q ss_pred             cC
Q 019298          342 DL  343 (343)
Q Consensus       342 ~l  343 (343)
                      ++
T Consensus       311 ~~  312 (363)
T PF00155_consen  311 RL  312 (363)
T ss_dssp             EE
T ss_pred             Ec
Confidence            63

On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....

>PRK09440 avtA valine--pyruvate transaminase; Provisional

Probab=100.00  E-value=5.2e-42  Score=320.02  Aligned_cols=321  Identities=20%  Similarity=0.252  Sum_probs=243.3

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCC
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE----KFNGYAPT   76 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~~   76 (343)
                      |.+|+||..+.... ++..+.....+...    ..++|+|+.|.|...  ..+.+.+.+++++.+...    ....|+++
T Consensus         1 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~i~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~   73 (416)
T PRK09440          1 MQFSKFGEKFTRHS-GITQLMDDLNDGLR----TPGAIMLGGGNPAHI--PEMEDYFRDLLADLLASGKLTEALGNYDGP   73 (416)
T ss_pred             CchhHHHHHHHhhh-cHHHHHHHHHHHhc----CCCceeccCCCCCcc--CCHHHHHHHHHHHHhcCcccccccccCCCC
Confidence            67899999988764 56666655554432    467899999997621  123456777877776542    34589999


Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC-----CCCeEEE-eCCCCcchHHHHHhcCc----
Q 019298           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR-----PGANILL-PRPGFPIYELSAAFRHI----  146 (343)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~-----~gd~vl~-~~p~~~~~~~~~~~~g~----  146 (343)
                      .|.++||+++++++++++|.++++++|++|+|+++++..++++++.     +||.|++ .+|+|+.|...+...+.    
T Consensus        74 ~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~  153 (416)
T PRK09440         74 QGKDELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSY  153 (416)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeec
Confidence            9999999999999998889999999999999999999999999984     5899999 69999999886654442    


Q ss_pred             eeEEeecCCCC-CCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298          147 EVRHFDLLPDK-GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (343)
Q Consensus       147 ~~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~  225 (343)
                      ....+++..++ .+.+|+++|+  +.++++++++++||||||.+++.+++++|+++|+++|+++|+||+|..+.... ..
T Consensus       154 ~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~-~~  230 (416)
T PRK09440        154 RPNIELLPEGQFKYHVDFEHLH--IDEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGI-IF  230 (416)
T ss_pred             ccccccccccccccCCCHHHcc--cCCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCc-ch
Confidence            22222332211 4679999987  35577899999999999999999999999999999999999999998543110 00


Q ss_pred             CcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHH
Q 019298          226 VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQI  304 (343)
Q Consensus       226 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~  304 (343)
                      ..... ...+++|+++||||. +++|+|+||++++        +++++++...... ..+++.+.|.++ ..+|.+. ++
T Consensus       231 ~~~~~-~~~~~vI~~~SfSK~-~~pGlRiG~~i~~--------~~l~~~~~~~~~~~~~~~s~~~q~~~-~~~l~~~-~~  298 (416)
T PRK09440        231 SEATP-LWNPNIILCMSLSKL-GLPGVRCGIVIAD--------EEIIEALSNMNGIISLAPGRLGPAIA-AEMIESG-DL  298 (416)
T ss_pred             hhcCc-cccCCeEEEeccccc-CCCcceEEEEeCC--------HHHHHHHHHHHHHhccCCCcHHHHHH-HHHhccc-hH
Confidence            01100 114689999999996 9999999999985        4688888877543 456788999988 6777653 23


Q ss_pred             HH-----HHHHHHHHHHHHHHhhcC-CC--CceeeCCCCceEeeecC
Q 019298          305 MI-----HGNFLENFAGSCVPSYKL-IP--ELINFKSTGSSLKYLDL  343 (343)
Q Consensus       305 l~-----~~~~~~~~~~~~~~~L~~-~~--g~~~~~~~~g~~~~~~l  343 (343)
                      .+     .++.++++++.+.+.|.+ ++  ++.+..|+||+|+|+++
T Consensus       299 ~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~fiw~~~  345 (416)
T PRK09440        299 LRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIFLWLWF  345 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceEEEEEC
Confidence            22     466778888888888865 33  35567899999999974

>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

Probab=100.00  E-value=6.7e-42  Score=307.99  Aligned_cols=278  Identities=22%  Similarity=0.355  Sum_probs=243.3

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~  114 (343)
                      .++++|+.++    +++++++.+.+++++.+.  .++.||++ ...+++++++++++     .+++++|++++|+.+.|.
T Consensus        22 ~~~i~LssNe----nP~gp~~~~~~~~~~~~~--~~~rYPd~-~~~~l~~a~a~~~~-----~~~~~~V~~gnGsde~i~   89 (356)
T COG0079          22 PGIIKLSSNE----NPYGPPPKVIEAIRAALD--KLNRYPDP-DYRELRAALAEYYG-----VVDPENVLVGNGSDELIE   89 (356)
T ss_pred             ccceeecCCC----CCCCCCHHHHHHHHHHHH--hhccCCCC-cHHHHHHHHHHHhC-----CCCcceEEEcCChHHHHH
Confidence            3689999999    668899999999988876  46789986 78999999999993     168899999999999999


Q ss_pred             HHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298          115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (343)
Q Consensus       115 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~  194 (343)
                      .++++++.+||+|+++.|+|..|...++..|.+++.++..+   |.+|++.+.+.+.++++++++||||||||..++.++
T Consensus        90 ~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~---~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~  166 (356)
T COG0079          90 LLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE---FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREE  166 (356)
T ss_pred             HHHHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc---cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHH
Confidence            99999999999999999999999999999999999998864   889999999999888999999999999999999999


Q ss_pred             HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (343)
Q Consensus       195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~  274 (343)
                      ++++++.+.+ +.++|+||||.+|..  .  .....+...+|+++++||||+||++|+|+||+++        ++++++.
T Consensus       167 l~~l~~~~~~-~~~vVvDEAY~eF~~--~--~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia--------~~~~i~~  233 (356)
T COG0079         167 LRALLEALPE-GGLVVIDEAYIEFSP--E--SSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIA--------NPELIAA  233 (356)
T ss_pred             HHHHHHhCCC-CcEEEEeCchhhcCC--c--hhhhhccCCCCEEEEEecHHhhhcchhceeeccC--------CHHHHHH
Confidence            9999999998 999999999999874  1  2222223456799999999999999999999887        4689999


Q ss_pred             HhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          275 MKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       275 l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +.+.+. .++.+.+++.++ .++|.+.....+.++.+.+.|+++.+.|+.++ +.-..|+.++|+++++
T Consensus       234 l~~vr~-p~~v~~~a~~aa-~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS~aNFvlv~~  299 (356)
T COG0079         234 LNKVRP-PFNVSSPALAAA-IAALRDADYLEESVERIREERERLYAALKALG-LFGVFPSQANFVLVRV  299 (356)
T ss_pred             HHHhcC-CCCCCHHHHHHH-HHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcEEEEEC
Confidence            999987 677899999888 78888753334499999999999999999995 6634788899999874

>PRK03317 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=3.9e-42  Score=315.81  Aligned_cols=285  Identities=17%  Similarity=0.245  Sum_probs=240.5

Q ss_pred             ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc--CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLS--EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      ..++|+.|++    .+++++.+++++++++..  .....|++ .|.+.||+++++|+++.+|.++++++|++|+|++++|
T Consensus        27 ~~i~l~~~~~----~~~~~~~~~~al~~~l~~~~~~~~~Y~~-~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l  101 (368)
T PRK03317         27 VPVRLNTNEN----PYPPSPALVADIAEAVAEAAAGLNRYPD-RDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEIL  101 (368)
T ss_pred             ceeEecCCCC----CCCCCHHHHHHHHHHHhhhhhhhccCCC-CchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHH
Confidence            5699999994    488999999999988753  24568976 5889999999999999889899999999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc-CCceEEEEeCCCCCcccccCH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~p~nptG~~~~~  192 (343)
                      ..++++++++||.|+++.|+|..|...++..|.+++.++..  +++++|+++++++++ ++++++++++||||||.+++.
T Consensus       102 ~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~  179 (368)
T PRK03317        102 QQLLQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPRA--ADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPL  179 (368)
T ss_pred             HHHHHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEcccC--CCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCH
Confidence            99999999999999999999999999999999888877653  467899999999886 477899999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  272 (343)
                      +++++|+++|   ++++|+||+|.++.+.+.. ......+..+++++++||||+||++|+|+||++++        ++++
T Consensus       180 ~~l~~l~~~~---~~~lI~DE~y~~~~~~~~~-~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~--------~~~~  247 (368)
T PRK03317        180 DDVEAILDAA---PGIVVVDEAYAEFRRSGTP-SALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAA--------PAVV  247 (368)
T ss_pred             HHHHHHHHHC---CceEEEeCCchhhcccCCc-CHHHHHHhCCCEEEEEechhhhccchhhhhhhhCC--------HHHH
Confidence            9999998877   6899999999998765432 22222334458999999999999999999999984        4788


Q ss_pred             HHHhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298          273 ERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD  342 (343)
Q Consensus       273 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~  342 (343)
                      +.++.... .++.+++.|.++ .++|.+...+.+.+++++++++.+.+.|+.+ |+.+..+++++++|.+
T Consensus       248 ~~l~~~~~-~~~~s~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~  314 (368)
T PRK03317        248 DALRLVRL-PYHLSAVTQAAA-RAALRHADELLASVAALRAERDRVVAWLREL-GLRVAPSDANFVLFGR  314 (368)
T ss_pred             HHHHhcCC-CCCCCHHHHHHH-HHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEeCCCCCcEEEEec
Confidence            88876653 457888999888 6777765566667778899999999999987 8887788899998865

>TIGR03539 DapC_actino succinyldiaminopimelate transaminase

Probab=100.00  E-value=2.2e-41  Score=309.46  Aligned_cols=296  Identities=21%  Similarity=0.289  Sum_probs=237.7

Q ss_pred             cHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCC
Q 019298           16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLP   95 (343)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~   95 (343)
                      +++.++....+..   .++...++|+.|+|.    .++++.+.+++++...   ...|+++.|.++||+++++++.+++|
T Consensus         5 ~~~~~~~~~~~~~---~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~~   74 (357)
T TIGR03539         5 PWDSLAPYKAKAA---SHPDGIVDLSVGTPV----DPVPPLIRAALAAAAD---APGYPQTWGTPELREAIVDWLERRRG   74 (357)
T ss_pred             hHHHHHHHHHHhh---hCCCCeEEccCCCCC----CCCCHHHHHHHHHHHh---hCCCCcccCCHHHHHHHHHHHHHhcC
Confidence            4455554444333   346788999999864    5567888888877653   35799999999999999999998888


Q ss_pred             CC-CCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCC
Q 019298           96 YK-LTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN  173 (343)
Q Consensus        96 ~~-~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~  173 (343)
                      +. +++++|++|+|+++++..++..+ +++||.|++++|+|+.+...++..|.+++.++         +++.+.   .++
T Consensus        75 ~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~---------~~~~l~---~~~  142 (357)
T TIGR03539        75 VPGLDPTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD---------DPTELD---PVG  142 (357)
T ss_pred             CCCCCcCeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC---------ChhhcC---ccC
Confidence            86 99999999999999999998887 79999999999999999998899999887763         223332   246


Q ss_pred             ceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccc--c-CCCCCEEEEccCccccCCC
Q 019298          174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV--F-GSTVPILTLGSLSKRWIVP  250 (343)
Q Consensus       174 ~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~--~-~~~~~~i~~~S~sK~~~~~  250 (343)
                      ++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++.....+..  . ...+++|+++||||.|+++
T Consensus       143 ~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~  222 (357)
T TIGR03539       143 PDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLA  222 (357)
T ss_pred             ccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCC
Confidence            889999999999999999999999999999999999999999988876532222211  0 1235799999999999999


Q ss_pred             CCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce
Q 019298          251 GWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI  329 (343)
Q Consensus       251 G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~  329 (343)
                      |+|+||++++        ++++++++..... ..+++.+.|.++ ..+|.+...+.+.++.++++++.+.+.|++. |+.
T Consensus       223 G~R~G~~i~~--------~~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~-g~~  292 (357)
T TIGR03539       223 GYRAGFVAGD--------PALVAELLTVRKHAGLMVPAPVQAAM-VAALGDDGHVAEQKARYAARRAQLKPALEKA-GFR  292 (357)
T ss_pred             ceeEEEEecC--------HHHHHHHHHHHhhcccCCCHHHHHHH-HHHcCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCC
Confidence            9999999974        3688888766542 457788888888 6667653334448888999999999999987 788


Q ss_pred             eeCCCCceEeeecC
Q 019298          330 NFKSTGSSLKYLDL  343 (343)
Q Consensus       330 ~~~~~~g~~~~~~l  343 (343)
                      +..|++|+|+|+++
T Consensus       293 ~~~p~~~~~~~~~~  306 (357)
T TIGR03539       293 IDHSEAGLYLWATR  306 (357)
T ss_pred             CcCCCccEEEEEEC
Confidence            88899999999863

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK14809 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2.7e-41  Score=309.06  Aligned_cols=276  Identities=20%  Similarity=0.302  Sum_probs=230.3

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      +.++++|+.|++    .+++++.+.+++++....  ...|++ .|.++||+++++++      ++++++|++|+|++++|
T Consensus        29 ~~~~i~l~~~~~----~~~~~~~~~~~~~~~~~~--~~~Y~~-~~~~~lr~~ia~~~------~~~~~~I~it~G~~~al   95 (357)
T PRK14809         29 PDDLVKLSSNEN----PHGPSPAAVEAIREAAER--VHSYPK-ASHADLTAALADRW------DVSPEQVWLANGGDGAL   95 (357)
T ss_pred             ccceeEecCCCC----CCCCCHHHHHHHHHHHhh--hhcCCC-CCHHHHHHHHHHHh------CCCcceEEECCCHHHHH
Confidence            567999999994    478888999999887653  467975 68899999999998      57899999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~  193 (343)
                      ..++++++++||.|++++|+|..|...+...|.+++.+++..++++.++.+++++.. ++++++++++||||||.++|.+
T Consensus        96 ~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPTG~~~s~~  174 (357)
T PRK14809         96 DYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNPTGSEIPLD  174 (357)
T ss_pred             HHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCCCcCCCHH
Confidence            999999999999999999999988888888999999999876667888888887765 3578999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  273 (343)
                      ++++|+++|++ +.++|+||+|.++.+.+.   ........+++++++||||.|+++|+|+||+++++        ++++
T Consensus       175 ~~~~l~~~~~~-~~~iI~De~y~~~~~~~~---~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~--------~~~~  242 (357)
T PRK14809        175 EVEALAERTDE-ETLVVVDEAYGEFAERPS---AVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPE--------EWAD  242 (357)
T ss_pred             HHHHHHHhCcc-CcEEEEechhhhccCCch---hHHHHhhCCCEEEEecchhHhcCcchhheeeecCH--------HHHH
Confidence            99999999975 789999999999876432   12223345689999999999999999999999863        6888


Q ss_pred             HHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++.+... .++.+.+.|.++ ..+|.+ ..+++ .++.++++++.+.+.|... +    .|.+|+|+|+++
T Consensus       243 ~~~~~~~-~~~~~~~~~~~a-~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~-~----~~~~g~f~~~~~  305 (357)
T PRK14809        243 AYARVNT-PFAASELACRAG-LAALDD-DEHVERTVETARWAREYIREELDAP-T----WESAGNFVLAEV  305 (357)
T ss_pred             HHHHhCC-CCCCCHHHHHHH-HHHhCC-HHHHHHHHHHHHHHHHHHHHHhcCc-c----CCCCCCEEEEEC
Confidence            8877654 456778888887 666665 45555 7888999999999988653 2    368899999874

>PRK09275 aspartate aminotransferase; Provisional

Probab=100.00  E-value=1.5e-41  Score=317.73  Aligned_cols=317  Identities=20%  Similarity=0.270  Sum_probs=232.4

Q ss_pred             ccccHHHHHHHHHhhccccc---cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 019298           13 SIITIKGMLSLLMQSVDDEK---NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEY   89 (343)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~---~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~   89 (343)
                      ...+|..-...+........   -=.++|+|+.|+|+    +++++.+.++. +++..   .+|+++.|.+++|++++++
T Consensus        75 ~~~g~~~r~~~~~~~~~~~~g~~~l~~~i~l~~g~p~----~~~~~~v~e~~-~~~~~---~~Y~~~~g~~~lreaia~~  146 (527)
T PRK09275         75 QKEGIEERFEAFLEEHKDVPGIDFLRDAVSYVRDQLG----FDADEFVYELV-DGIIG---DNYPVPDRMLKHTEKIVKD  146 (527)
T ss_pred             ccccHHHHHHHHHHhCCCCchHHHHHHHHhhcCCCCC----CCCCHHHHHHH-HHHhc---CCCCCCCCCHHHHHHHHHH
Confidence            33455555555554432100   01356999999965    77788888854 44432   3599999999999999996


Q ss_pred             Hhhh-CCCCC-C--CCcEEEecChHHHHHHHHHH-----hcCCCCeEEEeCCCCcchHHHHHhcCc--eeEEeecCCCCC
Q 019298           90 LSRD-LPYKL-T--PNDVFVTSGCTQAIDVAMAL-----LSRPGANILLPRPGFPIYELSAAFRHI--EVRHFDLLPDKG  158 (343)
Q Consensus        90 ~~~~-~~~~~-~--~~~i~~~~g~~~al~~~~~~-----l~~~gd~vl~~~p~~~~~~~~~~~~g~--~~~~~~~~~~~~  158 (343)
                      +.++ .+... .  .++|++|+|+++++..++.+     +++|||+|++++|+|+.|...+...|.  .++.++.+++++
T Consensus       147 ~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~  226 (527)
T PRK09275        147 YLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENE  226 (527)
T ss_pred             HHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccC
Confidence            6443 33222 2  34999999999999999886     679999999999999999998887754  455555556678


Q ss_pred             CCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhh--cCcEEEEccCCCccccCCCCCCcccccCCCCC
Q 019298          159 WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK--LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP  236 (343)
Q Consensus       159 ~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~--~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~  236 (343)
                      |.+|.++++++++++++++++++||||||.+++.+++++|+++|++  ++++||+||+|..+.+.   +.++... ..++
T Consensus       227 f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~s~~~~-~~~~  302 (527)
T PRK09275        227 WQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD---FRSLFAV-LPYN  302 (527)
T ss_pred             CCCCHHHHHhhcCCCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc---ccCHHHh-CCCC
Confidence            9999999999988899999999999999999999999999999964  59999999999998742   2222222 1258


Q ss_pred             EEEEccCccccCCCCCcEEEEEEeCCCCCC----------------------Cch---HHHHHH----hhhh-ccccCcc
Q 019298          237 ILTLGSLSKRWIVPGWRLGWFVTTDPCGMF----------------------RKP---KVVERM----KKYF-DILGDPA  286 (343)
Q Consensus       237 ~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~----------------------~~~---~~~~~l----~~~~-~~~~~~~  286 (343)
                      +|+++||||.|+++|+|+||++++++....                      .+|   .+++++    ++.. ..+.+++
T Consensus       303 ~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s  382 (527)
T PRK09275        303 TILVYSFSKYFGATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLS  382 (527)
T ss_pred             EEEEeehhhhccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCC
Confidence            999999999999999999999987531000                      000   022222    3333 3456778


Q ss_pred             hHHHHHH----HhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          287 TFIQVCI----MYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       287 ~~~~~a~----~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      .+.|.++    ..++|.....+.+ .++.++++++.+.+.|. . ++....|+|++|+|+++
T Consensus       383 ~p~Q~a~al~~~~all~~~~~~~~~~~~~~~~Rr~~l~~~Lg-~-~~~~~~p~g~fY~~~di  442 (527)
T PRK09275        383 TPQQVQMALFSLFALLDEEDAYKKAMKDIIRRRYKALYEGLG-L-PEPEDPNNAAYYTLIDL  442 (527)
T ss_pred             CHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHcC-C-CCcCCCCCeeEEEEEEh
Confidence            8888863    1455665556665 88999999999988883 2 34445799999999974

>PRK08056 threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=4.4e-41  Score=307.29  Aligned_cols=281  Identities=20%  Similarity=0.297  Sum_probs=231.0

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      +.++++|+.|++    .+++++.+++++.+.+..  ...|++ .+.+++|+++|+++      ++++++|++|+|+++++
T Consensus        19 ~~~~i~l~~~~~----~~~~p~~~~~a~~~~~~~--~~~y~~-~~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~l   85 (356)
T PRK08056         19 PDQLLDFSANIN----PLGMPVSLKRAIIDNLDC--AERYPD-VEYRHLHQALARHH------QVPASWILAGNGETESI   85 (356)
T ss_pred             hhhEEEeccccC----CCCCCHHHHHHHHHHHHh--cccCcC-ccHHHHHHHHHHHh------CcChhhEEECCCHHHHH
Confidence            567899999984    488899999999887653  347876 46899999999998      57899999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~  193 (343)
                      ..+++.+ .+|+ +++.+|+|..|...++..|.+++.+++++++++.+| +++++.+.++++++++++||||||.+++.+
T Consensus        86 ~~~~~~l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~NPTG~~~~~~  162 (356)
T PRK08056         86 FAVVSGL-KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPERQ  162 (356)
T ss_pred             HHHHHHh-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccCCCCEEEEeCCcCCCCCCCCHH
Confidence            9999887 6775 677899999999999999999999998766677777 455566667889999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  273 (343)
                      ++++|+++|+++++++|+||+|.++.+.+....+.  +...+++++++||||.|+++|+|+||+++++       +++++
T Consensus       163 ~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~-------~~~~~  233 (356)
T PRK08056        163 LLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQ--LADNPHLWVLRSLTKFYAIPGLRLGYLVNSD-------DAAVA  233 (356)
T ss_pred             HHHHHHHHHHhcCCEEEEecchhccCCcchHHHHH--hccCCCEEEEEechhhccCcchhheeeecCC-------HHHHH
Confidence            99999999999999999999999988755322221  2234689999999999999999999999853       35777


Q ss_pred             HHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++++... .++++.+.|.++ ..++++ ..|.+ .++.++++++.+.+.|+.++|+.+ .|.+|+|+|+++
T Consensus       234 ~l~~~~~-~~~~~~~~~~~a-~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~~~~~~~~~~~~  300 (356)
T PRK08056        234 RMRRQQM-PWSINAFAALAG-EVILQD-RAYQQATWQWLAEEGARFYQALCALPLLTV-WPGRANYLFLRC  300 (356)
T ss_pred             HHHHhCC-CCchhHHHHHHH-HHHhCC-HHHHHHHHHHHHHHHHHHHHHHhcCCCcEE-cCCCCcEEEEEc
Confidence            7776543 456777888777 666765 44554 788899999999999998888876 456799999874

>PRK05166 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2.7e-41  Score=310.40  Aligned_cols=282  Identities=18%  Similarity=0.280  Sum_probs=233.9

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      +.++++|+.|.+.    +++++.+.+++.+...  ...+|++..| .+||+++++++      ++++++|++|+|+++++
T Consensus        35 ~~~~i~l~~~~~~----~~~~~~~~~al~~~~~--~~~~Y~~~~g-~~lr~~ia~~~------~~~~~~i~~t~G~~~~l  101 (371)
T PRK05166         35 VPRIAKLGSNENP----LGPSPAVRRAFADIAE--LLRLYPDPQG-RALREAIAART------GVPADRIILGNGSEDLI  101 (371)
T ss_pred             CcceEEcCCCCCC----CCCCHHHHHHHHHHHH--HhhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHHH
Confidence            5578999999843    6778899999887543  2457998888 59999999998      56889999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~  193 (343)
                      ..++.+++++||.|+++.|+|+.+...++..|.+++.++++.  ++++|++++++.++++++++++++||||||.+++.+
T Consensus       102 ~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~  179 (371)
T PRK05166        102 AVICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTP--DLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTAD  179 (371)
T ss_pred             HHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCC--CCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHH
Confidence            999999999999999999999999999999999999998753  467999999999888889999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC-CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  272 (343)
                      ++++|+++|++ +.++|+||+|.++.+++..+..+..+. ..+++|+++||||.|+++|+|+||+++++       ++++
T Consensus       180 ~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~-------~~l~  251 (371)
T PRK05166        180 QLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSD-------PELV  251 (371)
T ss_pred             HHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCC-------HHHH
Confidence            99999999875 889999999999986543222222222 23579999999999999999999988753       4677


Q ss_pred             HHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          273 ERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       273 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +.+++... .++++.++|.++ .++|.+. ++++ .++.++++++.+.+.|+++ |+.+ .|.+|+|+|+++
T Consensus       252 ~~~~~~~~-~~~~~~~~q~~~-~~~l~~~-~~~~~~~~~~~~~r~~l~~~L~~~-g~~~-~p~~g~fl~~~~  318 (371)
T PRK05166        252 GLLDRVRT-PFNVNGAAQAAA-LAALDDE-EHLAKGVALALAERERLKKELAEM-GYRI-APSRANFLFFDA  318 (371)
T ss_pred             HHHHHhcc-CCCCCHHHHHHH-HHHhcCH-HHHHHHHHHHHHHHHHHHHHHHHC-cCee-CCCcCCEEEEeC
Confidence            87776554 456788888777 5666553 4555 7888999999999999988 7776 677899999874

>PRK03158 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.6e-41  Score=311.01  Aligned_cols=280  Identities=20%  Similarity=0.267  Sum_probs=235.1

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      ...+++|+.+++.    +++++.+.+++.+.+..  . .|.+..|.+++|+++++++      ++++++|++|+|+++++
T Consensus        28 ~~~~i~l~~n~~~----~~~~~~v~~a~~~~~~~--~-~~~p~~g~~~lr~~ia~~~------~~~~~~i~~t~G~~~~l   94 (359)
T PRK03158         28 LEKIVKLASNENP----YGPSPKVKEAIAAHLDE--L-ALYPDGYAPELRTKVAKHL------GVDEEQLLFGAGLDEVI   94 (359)
T ss_pred             CCceEEecCCCCC----CCCCHHHHHHHHHHHHH--h-hcCCCCcHHHHHHHHHHHh------CCCHHHEEECCCHHHHH
Confidence            3478999999953    67788999999887753  2 4555579999999999999      56789999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~  193 (343)
                      ..++++++++||.|++++|+|+.+...+...|.++..++++   ++.+|++++++.++++++++++++||||||.+++.+
T Consensus        95 ~~~~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~  171 (359)
T PRK03158         95 QMISRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHE  171 (359)
T ss_pred             HHHHHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHH
Confidence            99999999999999999999999999999999999999885   456899999998888889999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  273 (343)
                      ++.++++.|+ +|+++|+||+|.++.+++.....+...+..+++++++||||.|+++|+|+||++++        +++++
T Consensus       172 ~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~--------~~~~~  242 (359)
T PRK03158        172 ELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIAS--------EELIE  242 (359)
T ss_pred             HHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCC--------HHHHH
Confidence            9999999875 69999999999998876543333333445568999999999999999999999985        47888


Q ss_pred             HHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +++.... .++++.++|.++ ..+|.+ ..+++ .++.++++++.+.+.|.++ |+.+ .|.+|+|+|+++
T Consensus       243 ~~~~~~~-~~~~~~~~q~~~-~~~l~~-~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~-~~~~g~~i~~~~  308 (359)
T PRK03158        243 KLNIARP-PFNTTRIAQYAA-IAALED-QAFLKECVEKNAEGLEQYYAFCKEY-GLFY-YPSQTNFIFVDT  308 (359)
T ss_pred             HHHHhcC-CCCCCHHHHHHH-HHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHC-CCee-CCCcCcEEEEEC
Confidence            8877765 467899999998 777765 35555 6777888899999999888 7776 466789999874

>PRK07392 threonine-phosphate decarboxylase; Validated

Probab=100.00  E-value=1.7e-40  Score=304.05  Aligned_cols=279  Identities=17%  Similarity=0.243  Sum_probs=225.9

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      ..++++|+.+.    +.+++++.+.+++++.+..  ...|+++ +.++||+++|+++      ++++++|++|+|++++|
T Consensus        21 ~~~~i~l~~~~----n~~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~------~v~~~~I~it~G~~~~i   87 (360)
T PRK07392         21 PDAILDFSASI----NPLGPPESVIAAIQSALSA--LRHYPDP-DYRELRLALAQHH------QLPPEWILPGNGAAELL   87 (360)
T ss_pred             cccEEEeCCcC----CCCCCCHHHHHHHHHHHHH--hhcCCCc-CHHHHHHHHHHHh------CcChhhEEECCCHHHHH
Confidence            45679999998    3478889999999887764  5679875 4689999999999      57899999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC---CCCHHHHHhhhcCCceEEEEeCCCCCccccc
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW---EVDLDDIESLADQNTVALVIINPGNPCGNVY  190 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~  190 (343)
                      ..+++++. +||.|++++|+|..|...++..|.+++.++++.++++   ..+++.+++.. .+++++++++||||||.++
T Consensus        88 ~~~~~~l~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~NPTG~~~  165 (360)
T PRK07392         88 TWAGRELA-QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHNPTGKLW  165 (360)
T ss_pred             HHHHHHhC-CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCCCCCCCc
Confidence            99998875 6889999999999999999999999999998765543   35677776543 3678999999999999999


Q ss_pred             CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchH
Q 019298          191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK  270 (343)
Q Consensus       191 ~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~  270 (343)
                      +++++.+++   +++++ +|+||+|.++.+++........+...+++|+++||||+|+++|+|+||++++        ++
T Consensus       166 ~~~~l~~l~---~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~--------~~  233 (360)
T PRK07392        166 SREAILPLL---EQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAH--------PD  233 (360)
T ss_pred             CHHHHHHHH---HHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCC--------HH
Confidence            987766654   57775 6779999999876542222223444568999999999999999999999985        36


Q ss_pred             HHHHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          271 VVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       271 ~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +++++..... .++++.+.|.++ ..+|++ ..|.+ .++.++++++.+.+.|+.++|+.+ .+++|+|+|+++
T Consensus       234 ~~~~~~~~~~-~~~~s~~~q~~~-~~~l~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~~~~~~fl~~~~  303 (360)
T PRK07392        234 RLQRWQQWRD-PWPVNGLAAAAA-IAALAD-RDFQQQTWAWLPPAREALFQGLASLPGLTP-LPSAANFLLVQS  303 (360)
T ss_pred             HHHHHHhhCC-CCCCCHHHHHHH-HHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhCCCcEE-CCCCCCEEEEEc
Confidence            7777776553 467889999988 777765 45555 667889999999999998888876 568899999874

>PRK06225 aspartate aminotransferase; Provisional

Probab=100.00  E-value=4.5e-40  Score=303.46  Aligned_cols=287  Identities=20%  Similarity=0.272  Sum_probs=238.1

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      +.+.|+|+.+++    .+++++.+.+++.+++.......|+++.|.+++|+++++++      ++++++|++|+|+++++
T Consensus        27 ~~~~i~l~~~~~----~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l------~~~~~~v~~~~g~t~al   96 (380)
T PRK06225         27 DKEMIWMGQNTN----HLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDL------GLDDDEALITAGATESL   96 (380)
T ss_pred             cCCeEEccCCCC----CCCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhc------CCCCCcEEEeCCHHHHH
Confidence            567899999984    47889999999999987665678998899999999999998      56888999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecC-CCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL-PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~  192 (343)
                      ..++++++.+||+|++++|+|..+...+...|.+++.++++ .++++.+|++.+++.++++++++++++|+||||.+++.
T Consensus        97 ~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~  176 (380)
T PRK06225         97 YLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYTE  176 (380)
T ss_pred             HHHHHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCCH
Confidence            99999999999999999999999988889999999998874 33467899999999998889999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  272 (343)
                      +++++|+++|+++|+++|+||+|..+..+..   ....+. .++++++.||||.||++|+|+||++++        ++++
T Consensus       177 ~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~---~~~~~~-~~~~i~~~s~SK~~g~~G~RiG~i~~~--------~~l~  244 (380)
T PRK06225        177 EEIKEFAEIARDNDAFLLHDCTYRDFAREHT---LAAEYA-PEHTVTSYSFSKIFGMAGLRIGAVVAT--------PDLI  244 (380)
T ss_pred             HHHHHHHHHHHHCCcEEEEehhHHHHhccCC---chhhcC-CCCEEEEeechhhcCCccceeEEEecC--------HHHH
Confidence            9999999999999999999999988754321   112222 257899999999999999999999985        3688


Q ss_pred             HHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCce-eeCCCCceEeeecC
Q 019298          273 ERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELI-NFKSTGSSLKYLDL  343 (343)
Q Consensus       273 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~-~~~~~~g~~~~~~l  343 (343)
                      +.++.......+.+.+.|.++ ..+|....++++ .++.++++++.+.+.|++++|+. ...|.+|+|+|+++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~  316 (380)
T PRK06225        245 EVVKSIVINDLGTNVIAQEAA-IAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDI  316 (380)
T ss_pred             HHHHHHHhcccCCCHHHHHHH-HHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEc
Confidence            887766433456778888777 555554455655 56667788888888998877754 23577889999864

>PLN03026 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.2e-40  Score=306.42  Aligned_cols=275  Identities=21%  Similarity=0.238  Sum_probs=229.8

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      +.++|+|+.|++    .++++|.+.+++.+..   ..+.|++ .+.++||+++++++      ++++++|++|+|+++++
T Consensus        51 ~~~~i~l~~n~~----p~~~~~~v~~a~~~~~---~~~~Yp~-~~~~~lr~~ia~~~------~~~~~~I~~t~Ga~~~i  116 (380)
T PLN03026         51 PEDIVKLDANEN----PYGPPPEVLEALGNMK---FPYVYPD-PESRRLRAALAEDS------GLESENILVGCGADELI  116 (380)
T ss_pred             ccceEEccCCCC----CCCCCHHHHHHHHhhH---hhccCCC-CCHHHHHHHHHHHh------CcChhhEEEcCCHHHHH
Confidence            468899999984    4778888888886531   2346876 46899999999998      57889999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhh-cCCceEEEEeCCCCCcccccCH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA-DQNTVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~-~~~~~~i~~~~p~nptG~~~~~  192 (343)
                      ..++.+++++||+|++++|+|..|...++..|.+++.++.+  +++.+|++++++.+ .++++++++++||||||.+++.
T Consensus       117 ~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~  194 (380)
T PLN03026        117 DLLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRT--PDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISD  194 (380)
T ss_pred             HHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCH
Confidence            99999999999999999999999999999999999999874  45789999999988 6789999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  272 (343)
                      +++++|++.+    +++|+||+|.+|.+.+..   .......+++|+++||||.||++|+|+||++++        ++++
T Consensus       195 ~~l~~l~~~~----~~vi~DeaY~~~~~~~~~---~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~--------~~~i  259 (380)
T PLN03026        195 DDLLKILELP----ILVVLDEAYIEFSTQESR---MKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFP--------LSII  259 (380)
T ss_pred             HHHHHHHhcC----CEEEEECcchhhcCCcch---HHHHHhCCCEEEEecchHhhcCccccceeeecC--------HHHH
Confidence            9999998753    899999999998764321   122334578999999999999999999999985        4788


Q ss_pred             HHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          273 ERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       273 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +.+++... .++.+.++|.++ .++|.+. ++++ .++.++++|+.+.+.|+.++++.+ .|++|+|+|+++
T Consensus       260 ~~l~~~~~-~~~~~~~~q~aa-~~aL~~~-~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~p~~~~f~~~~~  327 (380)
T PLN03026        260 EYLWRAKQ-PYNVSVAAEVAA-CAALSNP-KYLEDVKNALVEERERLFGLLKEVPFLEP-YPSDANFILCRV  327 (380)
T ss_pred             HHHHHhcC-CCCCCHHHHHHH-HHHhhCH-HHHHHHHHHHHHHHHHHHHHHHHCCCCeE-CCCCCeEEEEEC
Confidence            88887765 456788888888 7777763 5555 888999999999999998855555 789999999864

>PLN02672 methionine S-methyltransferase

Probab=100.00  E-value=2.3e-40  Score=327.23  Aligned_cols=291  Identities=13%  Similarity=0.244  Sum_probs=235.3

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~a  112 (343)
                      +.++|+|+.|++    .+++++.+++++.+++...   .+  ..|.+++++++++++.+++|+..++ ++|++++|++++
T Consensus       696 g~~vI~LsinE~----d~ppPp~V~eAi~eal~~~---~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~el  766 (1082)
T PLN02672        696 ESSLIHMDVDES----FLPVPSAVKASIFESFVRQ---NI--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLAL  766 (1082)
T ss_pred             CCCEEEEeCCCC----CCCCCHHHHHHHHHHHhhc---CC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHH
Confidence            678999999994    4889999999999877532   22  3456789999999999988988765 589999999999


Q ss_pred             HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCC-CCccccc
Q 019298          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPG-NPCGNVY  190 (343)
Q Consensus       113 l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~-nptG~~~  190 (343)
                      +..++++++++||.|+++.|+|+.|...++..|.+++.++++++++|.+|.+.+++++++ +.+.+++++|| ||||.++
T Consensus       767 L~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~  846 (1082)
T PLN02672        767 FNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLY  846 (1082)
T ss_pred             HHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccC
Confidence            999999999999999999999999999999999999999997777899999999999876 45689999997 9999999


Q ss_pred             CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC--Cccc----ccCC---CCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298          191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF--VPMG----VFGS---TVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (343)
Q Consensus       191 ~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~--~~~~----~~~~---~~~~i~~~S~sK~~~~~G~r~G~i~~~~  261 (343)
                      +.+++++|+++|++||++||+||+|.++.|++...  .++.    .+..   ..+|++++||||.|+++|+|+||+++++
T Consensus       847 S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~  926 (1082)
T PLN02672        847 SNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALND  926 (1082)
T ss_pred             CHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCC
Confidence            99999999999999999999999999998865421  1111    1111   2479999999999999999999999864


Q ss_pred             CCCCCCchHHHHHHhhhhccccCcchHHHHHHH--hccch-hhHHH---H-HHHHHHHHHHHHHHHhhcCCCCceeeCCC
Q 019298          262 PCGMFRKPKVVERMKKYFDILGDPATFIQVCIM--YGCLS-TIMQI---M-IHGNFLENFAGSCVPSYKLIPELINFKST  334 (343)
Q Consensus       262 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~--~~~l~-~~~~~---l-~~~~~~~~~~~~~~~~L~~~~g~~~~~~~  334 (343)
                             ++++++++..... ..+....|.++.  .+++. ....|   + +.++.++++++.+.+.|+++ |+.+..|+
T Consensus       927 -------~eLi~~l~~~~~~-s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~-Gi~v~~Pe  997 (1082)
T PLN02672        927 -------SVLIDAFHSAPGL-SRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC-GWDVLEPQ  997 (1082)
T ss_pred             -------HHHHHHHHHhhhh-cCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEecCC
Confidence                   3488888765432 222223333330  22222 11223   2 27888999999999999998 88888999


Q ss_pred             CceEeeec
Q 019298          335 GSSLKYLD  342 (343)
Q Consensus       335 ~g~~~~~~  342 (343)
                      ||+|+|++
T Consensus       998 GGFfLwl~ 1005 (1082)
T PLN02672        998 GGISMVAK 1005 (1082)
T ss_pred             cEEEEEEE
Confidence            99999985

>PRK04870 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2.5e-40  Score=302.60  Aligned_cols=278  Identities=18%  Similarity=0.310  Sum_probs=232.4

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~a  112 (343)
                      +.++++|+.|++    .+++++.+++++.+++.......|++ .|.++||++++++++      +.+ ++|++|+|++++
T Consensus        25 ~~~~i~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~~------~~~~~~I~~t~G~~~~   93 (356)
T PRK04870         25 ATGMVKLDAMEN----PYRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAMG------VPAGADVLLGNGSDEL   93 (356)
T ss_pred             CCCceeCcCCCC----CCCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHhC------cCCCCcEEEcCCHHHH
Confidence            568999999994    48899999999999886555678987 678999999999983      333 589999999999


Q ss_pred             HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc-CCceEEEEeCCCCCcccccC
Q 019298          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYS  191 (343)
Q Consensus       113 l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~p~nptG~~~~  191 (343)
                      +..++++++++||+|++++|+|..|...++..|.+++.++++  +++.+|++++++++. .+++++++++||||||.+++
T Consensus        94 i~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~  171 (356)
T PRK04870         94 IQLLALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLT--ADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFD  171 (356)
T ss_pred             HHHHHHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCC
Confidence            999999999999999999999999999999999999999885  357899999999886 47899999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (343)
Q Consensus       192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  271 (343)
                      .+++++++++|   +.++|+||+|..+.+.+  ..  ......+++++++|||| |+++|+|+||++++        +++
T Consensus       172 ~~~~~~i~~~~---~~~ii~De~y~~~~~~~--~~--~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~--------~~~  235 (356)
T PRK04870        172 DADVERIIEAA---PGLVVVDEAYQPFAGDS--WL--PRLARFPNLLVMRTVSK-LGLAGLRLGYLAGH--------PAW  235 (356)
T ss_pred             HHHHHHHHHHC---CCEEEEECCchhhcCcc--hH--HHHhhCCCEEEEecchh-hhhHHHhhhhhhCC--------HHH
Confidence            99999999998   67899999999876432  11  12234468999999999 89999999999985        368


Q ss_pred             HHHHhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          272 VERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       272 ~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +++++.... .++.+.+.|.++ ..++++...+.+.+++++++++.+.+.|++++|+.+ .|.+|+|+|+++
T Consensus       236 i~~~~~~~~-~~~~~~~~q~~a-~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~  304 (356)
T PRK04870        236 IAELDKVRP-PYNVNVLTQATA-LFALEHVDVLDAQAAQLRAERTRLAAALAALPGVTV-FPSAANFILVRV  304 (356)
T ss_pred             HHHHHHccC-CCcCCHHHHHHH-HHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEE-CCCCCeEEEEEC
Confidence            888877654 456778888877 666665333334788899999999999999888876 577888999874

>PRK08637 hypothetical protein; Provisional

Probab=100.00  E-value=1.1e-39  Score=301.30  Aligned_cols=302  Identities=18%  Similarity=0.235  Sum_probs=224.3

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC---CCcEEEecChHH
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT---PNDVFVTSGCTQ  111 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~---~~~i~~~~g~~~  111 (343)
                      ..++|.++|...........+.+.+++++. ......+|+++.|.++||+++++++.+..+ ...   .++|++|+|+++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~~~I~it~G~~~   80 (388)
T PRK08637          3 ATKYNATIGMATEKGGPMYLSSLQDLLNDL-TPDEIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTNALTH   80 (388)
T ss_pred             ccceecceeeEecCCCcchHHHHHHHHHhh-ccccccCCCCCCCCHHHHHHHHHHHhccCc-cccccccceeeEccchHH
Confidence            456778888754222222333344433332 223567999999999999999999976443 233   368999999999


Q ss_pred             HHHHHHHHhcCCCCeEEEeCCCCcchHHHH-HhcCceeEEeecCCCCCCCCCHHHHHhhhc----CCceEEEEeCCCCCc
Q 019298          112 AIDVAMALLSRPGANILLPRPGFPIYELSA-AFRHIEVRHFDLLPDKGWEVDLDDIESLAD----QNTVALVIINPGNPC  186 (343)
Q Consensus       112 al~~~~~~l~~~gd~vl~~~p~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~i~~~~p~npt  186 (343)
                      ++..++.+++++||.|++++|+|+.|...+ ...|.+++.+++.. +++++|++++++.++    +.+.++++++|||||
T Consensus        81 al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~-~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPT  159 (388)
T PRK08637         81 GLSLVADLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFD-EDGGFDTDALKEALQAAYNKGKVIVILNFPNNPT  159 (388)
T ss_pred             HHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccC-CCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCC
Confidence            999999999999999999999999998875 46899999998843 234689999998876    345567788999999


Q ss_pred             ccccCHHHHHHHHHHHhh-----cCcEEEEccCCCccccCCCCCCcc-ccc-CCCCCE--EEEccCccccCCCCCcEEEE
Q 019298          187 GNVYSYQHLQKLAETANK-----LKTLVIADEVYGHLVFGDKPFVPM-GVF-GSTVPI--LTLGSLSKRWIVPGWRLGWF  257 (343)
Q Consensus       187 G~~~~~~~l~~l~~~~~~-----~~~~~i~D~ay~~~~~~~~~~~~~-~~~-~~~~~~--i~~~S~sK~~~~~G~r~G~i  257 (343)
                      |.+++.+++++|+++|++     |++++|+||+|.++.|++....++ ..+ +..+++  ++++|+||.|+++|+|+||+
T Consensus       160 G~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~  239 (388)
T PRK08637        160 GYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFI  239 (388)
T ss_pred             CCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEE
Confidence            999999999999999875     899999999999999877544332 222 334564  45679999999999999999


Q ss_pred             EEeCCCCCCCchHHHHHHhhh-----hccccCcchHHHHHHHhccchhhHHHHH----HHHHHHHHHHHHHHhhcCC---
Q 019298          258 VTTDPCGMFRKPKVVERMKKY-----FDILGDPATFIQVCIMYGCLSTIMQIMI----HGNFLENFAGSCVPSYKLI---  325 (343)
Q Consensus       258 ~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~~~l~~~~~~l~----~~~~~~~~~~~~~~~L~~~---  325 (343)
                      ++++...  .++++++.+...     ....++++.+.|.++ ..+|.+. .+.+    .+..++++++.+.+.|+..   
T Consensus       240 ~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~-~~~l~~~-~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~  315 (388)
T PRK08637        240 TFGTKAG--SSQTVKEALEKKVKGLIRSNISNGPHPSQSAV-LRALNSP-EFDKEKQEKFQILKERYEKTKEVLYDGKYD  315 (388)
T ss_pred             EEccccC--CcHHHHHHHHHHHHHHhhcccCCCCcHHHHHH-HHHhCCH-HHHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence            9753100  124567666532     112347788999999 7777653 3433    5566888888888888664   


Q ss_pred             CCceeeCCCCceEeeecC
Q 019298          326 PELINFKSTGSSLKYLDL  343 (343)
Q Consensus       326 ~g~~~~~~~~g~~~~~~l  343 (343)
                      +++.+..|++|+|+|+++
T Consensus       316 ~~~~~~~~~~g~~~~~~l  333 (388)
T PRK08637        316 DAWQAYPFNSGYFMCLKL  333 (388)
T ss_pred             CCcccccccceEEEEecC
Confidence            257777889999999975

>PRK09105 putative aminotransferase; Provisional

Probab=100.00  E-value=5.9e-40  Score=300.67  Aligned_cols=274  Identities=16%  Similarity=0.184  Sum_probs=226.1

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~  114 (343)
                      ++.++|+.|++    .+++++.+.+++.+.+..  ...|++. +.++||+++++++      ++++++|++|+|++++|.
T Consensus        43 ~~~i~l~~~~~----~~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~------~v~~e~I~it~Gs~~ai~  109 (370)
T PRK09105         43 EGAVFLNANEC----PLGPSPAARDAAARSAAL--SGRYDLE-LEDDLRTLFAAQE------GLPADHVMAYAGSSEPLN  109 (370)
T ss_pred             CCcEEecCCCC----CCCCCHHHHHHHHHHHHH--hcCCCCc-hHHHHHHHHHHHh------CcChhhEEEcCChHHHHH
Confidence            45799999984    478899999999887653  3468875 4899999999987      578999999999999999


Q ss_pred             HHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298          115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (343)
Q Consensus       115 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~  194 (343)
                      .++.+++++||+|++++|+|..|...++..|.+++.++++.  ++.+|++++++. .++++++++|+||||||.+++.++
T Consensus       110 ~~~~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~~  186 (370)
T PRK09105        110 YAVLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRA--DGAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPRAD  186 (370)
T ss_pred             HHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCHHH
Confidence            99999999999999999999999999999999999998753  467899999876 456889999999999999999999


Q ss_pred             HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (343)
Q Consensus       195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~  274 (343)
                      ++++++.++ +++++|+||+|..+...   .......+..+++++++||||+||++|+|+||++++        ++++++
T Consensus       187 l~~l~~~~~-~~~~lIvDEaY~~f~~~---~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~--------~~~i~~  254 (370)
T PRK09105        187 IEWLLANKP-AGSVLLVDEAYIHFSDA---PSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAAR--------PDLLAK  254 (370)
T ss_pred             HHHHHHhCC-CCcEEEEECchHHhccC---cchHHHHhhCCCEEEEecccHhhcCCccceeeeecC--------HHHHHH
Confidence            999999764 58999999999876532   111111233568999999999999999999999985        368888


Q ss_pred             HhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298          275 MKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD  342 (343)
Q Consensus       275 l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~  342 (343)
                      ++.. . ...++...|.++ .++|.+ .+|++ .+++++++++.+.+.|+++ |+.+..+++++| |++
T Consensus       255 l~~~-~-~~~~~~~~~~aa-~~~L~~-~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~~f~-~~~  317 (370)
T PRK09105        255 LARF-G-HNPLPVPAAAAG-LASLRD-PKLVPQRRAENAAVREDTIAWLKKK-GYKCTPSQANCF-MVD  317 (370)
T ss_pred             HHhc-C-CCCcCHHHHHHH-HHHHhC-HHHHHHHHHHHHHHHHHHHHHHHHC-CCCcCCCCCcEE-EEe
Confidence            8766 2 345677777777 666766 45665 7889999999999999988 888767777766 454

>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase

Probab=100.00  E-value=6.3e-40  Score=306.53  Aligned_cols=295  Identities=18%  Similarity=0.259  Sum_probs=216.9

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH-HHHhhhCCCC-CCCC--cEEEecChH
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIA-EYLSRDLPYK-LTPN--DVFVTSGCT  110 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia-~~~~~~~~~~-~~~~--~i~~~~g~~  110 (343)
                      .+.|+|++|+|+    ++++ .+..++.+++..   .+|+++.|...++++++ +|+.+.++.. ..++  +|++|+|++
T Consensus        94 ~~~i~l~~g~p~----~~~~-~~~~~~~~~~~~---~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat  165 (521)
T TIGR03801        94 RDIISYVIDQLG----FDPD-AFLYEMCDGIIG---DNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGT  165 (521)
T ss_pred             HHHHhhcCCCCC----CCCC-HHHHHHHHHhhc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHH
Confidence            356899999965    6654 444555555432   26987778888888877 5666554433 3444  899999999


Q ss_pred             HHHHHHHHH-----hcCCCCeEEEeCCCCcchHHHHHhc--CceeEEeecCCCCC-----CCCCHHHHHhhhcCCceEEE
Q 019298          111 QAIDVAMAL-----LSRPGANILLPRPGFPIYELSAAFR--HIEVRHFDLLPDKG-----WEVDLDDIESLADQNTVALV  178 (343)
Q Consensus       111 ~al~~~~~~-----l~~~gd~vl~~~p~~~~~~~~~~~~--g~~~~~~~~~~~~~-----~~~d~~~l~~~~~~~~~~i~  178 (343)
                      +++..++.+     +++|||+|++++|+|+.|...+...  |.+++.++.+++++     |.+|.+++++++++++++++
T Consensus       166 ~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~kai~  245 (521)
T TIGR03801       166 AAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIKALF  245 (521)
T ss_pred             HHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCcEEE
Confidence            999999887     6899999999999999999887776  66777777654433     88999999998888899999


Q ss_pred             EeCCCCCcccccCHHHHHHHHHHHhhc--CcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEE
Q 019298          179 IINPGNPCGNVYSYQHLQKLAETANKL--KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW  256 (343)
Q Consensus       179 ~~~p~nptG~~~~~~~l~~l~~~~~~~--~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~  256 (343)
                      +++||||||.+++.+++++|+++|++|  +++||+||+|+.|.+.   +.++... ..+++|+++||||.|+++|+|+||
T Consensus       246 l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~sl~~~-~~~~vI~v~SfSK~fg~~G~RlG~  321 (521)
T TIGR03801       246 VVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDD---FRSLFAE-LPYNTIGVYSFSKYFGATGWRLGT  321 (521)
T ss_pred             EeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhccc---ccchhhh-CCCCEEEEEcchhhccCchhhhhh
Confidence            999999999999999999999999986  9999999999998752   2232222 125899999999999999999999


Q ss_pred             EEEeCCCCC---CC--chHHHHHH------------------------hhhh-ccccCcchHHHH--H--HHhccchhhH
Q 019298          257 FVTTDPCGM---FR--KPKVVERM------------------------KKYF-DILGDPATFIQV--C--IMYGCLSTIM  302 (343)
Q Consensus       257 i~~~~~~~~---~~--~~~~~~~l------------------------~~~~-~~~~~~~~~~~~--a--~~~~~l~~~~  302 (343)
                      +++++....   ..  .++..+.+                        ++.. +...+++.+.|.  +  +..++|....
T Consensus       322 i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~~~  401 (521)
T TIGR03801       322 IALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDKEN  401 (521)
T ss_pred             hhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhccch
Confidence            998642100   00  00111112                        2222 234556666665  3  2245666555


Q ss_pred             HHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          303 QIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       303 ~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      .+.+ .++.++++++.+.+.| .+ .+....|+||+|+|+++
T Consensus       402 ~y~~~~~~~~~~R~~~l~~~L-g~-~~~~~~~~g~~Y~~~di  441 (521)
T TIGR03801       402 AYKAETKDICRRREKLLFRGL-GL-PLQEDPNDVAYYTLIDL  441 (521)
T ss_pred             hHHHHHHHHHHHHHHHHHHhc-CC-CCcCCCCCeEEEEEeeh
Confidence            6666 8889999999999888 22 23345789999999975

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).

>PRK14807 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2.2e-39  Score=295.52  Aligned_cols=277  Identities=19%  Similarity=0.322  Sum_probs=228.7

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~  114 (343)
                      ...++|+.|++    .+++++.+.+++++.+.......|++. +.+++|+++|+++      ++++++|++|+|+++++.
T Consensus        22 ~~~~~l~~~~~----~~~~p~~~~~a~~~~~~~~~~~~y~~~-~~~~lr~~ia~~~------~~~~~~i~it~G~~~~l~   90 (351)
T PRK14807         22 PYKYKMDANET----PFELPEEVIKNIQEIVKSSQVNIYPDP-TAEKLREELARYC------SVVPTNIFVGNGSDEIIH   90 (351)
T ss_pred             CceeEccCCCC----CCCCCHHHHHHHHHHhhcCcccCCCCc-cHHHHHHHHHHHh------CCCcccEEEecCHHHHHH
Confidence            45689999995    478899999999988765556788864 5699999999998      578899999999999999


Q ss_pred             HHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHH
Q 019298          115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       115 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~  193 (343)
                      .++++++++||+|++++|+|..+...++..|.+++.++++  +++.+|++.++++++. +++++++++||||||.+++.+
T Consensus        91 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~  168 (351)
T PRK14807         91 LIMLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLK--EDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIERE  168 (351)
T ss_pred             HHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHH
Confidence            9999999999999999999999999999999999999875  3467999999999875 789999999999999999998


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  273 (343)
                      ++.++++   +++.++|+||+|.++. + ....+  .....+++|+++||||.|+++|+|+||++++        +++++
T Consensus       169 ~l~~l~~---~~~~~~ivDe~y~~~~-~-~~~~~--~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~--------~~~~~  233 (351)
T PRK14807        169 DIIKIIE---KSRGIVVVDEAYFEFY-G-NTIVD--VINEFENLIVLRTLSKAFGLAGLRVGYAVAN--------ENILK  233 (351)
T ss_pred             HHHHHHH---hCCCEEEEeCcchhhc-c-cchHH--HhhhCCCEEEEecchHhcccchhceeeeecC--------HHHHH
Confidence            8877765   5567899999998863 2 22212  1234468999999999999999999999984        47888


Q ss_pred             HHhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      .++.... .+..+.+.|.++ ..+|++ ..+.+.++.++++++.+.+.|++++|+.+ .|.+|+|+|+++
T Consensus       234 ~~~~~~~-~~~~~~~~q~~~-~~~l~~-~~~~~~~~~~~~~r~~l~~~l~~~~g~~~-~~~~~~~~~i~~  299 (351)
T PRK14807        234 YLNLVKS-PYNINSLSQVIA-LKVLRT-GVLKERVNYILNERERLIKELSKIPGIKV-YPSKTNFILVKF  299 (351)
T ss_pred             HHHHccC-CCCcCHHHHHHH-HHHHhH-HHHHHHHHHHHHHHHHHHHHHHhCCCcEE-CcCCccEEEEEc
Confidence            8877654 356788889888 666664 33444777888999999999988888877 567788999875

>PRK08153 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.5e-39  Score=298.43  Aligned_cols=275  Identities=16%  Similarity=0.205  Sum_probs=230.4

Q ss_pred             ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHH
Q 019298           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV  115 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~  115 (343)
                      ..++|+.|++    ++++++.+.+++.+....  ...|+++ +.++||+++|+++      ++++++|++|+|++++|..
T Consensus        33 ~~~~l~~~~~----~~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~~ia~~~------~~~~~~I~it~G~~~~l~~   99 (369)
T PRK08153         33 FRARIGANES----GFGPSPSVIAAMREAAAE--IWKYGDP-ENHDLRHALAAHH------GVAPENIMVGEGIDGLLGL   99 (369)
T ss_pred             ceeEecCCCC----CCCCCHHHHHHHHHHHHH--hhcCCCC-ccHHHHHHHHHHh------CCCHHHEEEcCCHHHHHHH
Confidence            4469999994    488899999999887642  3579876 5799999999998      5788999999999999999


Q ss_pred             HHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhh-cCCceEEEEeCCCCCcccccCHHH
Q 019298          116 AMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA-DQNTVALVIINPGNPCGNVYSYQH  194 (343)
Q Consensus       116 ~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~-~~~~~~i~~~~p~nptG~~~~~~~  194 (343)
                      ++.+++++||.|+++.|+|+.+...+...|.+++.++++.   ..+|++++++.+ +++++++++++||||||.+++.++
T Consensus       100 ~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~---~~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~  176 (369)
T PRK08153        100 IVRLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRD---DREDLDALLDAARRENAPLVYLANPDNPMGSWHPAAD  176 (369)
T ss_pred             HHHHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCC---CCCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHH
Confidence            9999999999999999999999988888999999998743   257899988766 457889999999999999999999


Q ss_pred             HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (343)
Q Consensus       195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~  274 (343)
                      +++++++|++ ++++|+||+|..+.+++. ..++.  ...+++++++||||+||++|+|+||++++        +++++.
T Consensus       177 l~~l~~~~~~-~~~lI~DE~y~~~~~~~~-~~~~~--~~~~~~i~~~SfSK~~g~~GlRiG~~v~~--------~~~~~~  244 (369)
T PRK08153        177 IVAFIEALPE-TTLLVLDEAYCETAPAGA-APPID--TDDPNVIRMRTFSKAYGLAGARVGYAIGA--------PGTIKA  244 (369)
T ss_pred             HHHHHHhCCC-CcEEEEeCchhhhcCccc-chhhh--hcCCCEEEEecchHhccCcchheeeeecC--------HHHHHH
Confidence            9999999874 999999999999887543 22222  12458999999999999999999999985        368888


Q ss_pred             HhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          275 MKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       275 l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +.+... .++++++.|.++ ..+|.+ .++++ .++.++++++.+.+.|+.. |+.+ .|++|+|+|+++
T Consensus       245 l~~~~~-~~~~s~~~q~~~-~~~l~~-~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~-~p~~~~f~~~~~  309 (369)
T PRK08153        245 FDKVRN-HFGMNRIAQAAA-LAALKD-QAYLAEVVGKIAAARDRIAAIARAN-GLTP-LPSATNFVAIDC  309 (369)
T ss_pred             HHHhhc-CCCCCHHHHHHH-HHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHC-CCcc-CCCcCcEEEEEC
Confidence            877665 457889999998 677765 45565 8888999999999999887 7765 578999999864

>PRK03321 putative aminotransferase; Provisional

Probab=100.00  E-value=7.1e-40  Score=299.26  Aligned_cols=281  Identities=20%  Similarity=0.282  Sum_probs=234.0

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~  114 (343)
                      ..+|+|+.+.+.    +++++.+.+++.+.+..  ...|++ .|.+++|+++++++      ++++++|++++|+++++.
T Consensus        22 ~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~~-~g~~~lr~~ia~~~------~~~~~~I~~~~G~~~~l~   88 (352)
T PRK03321         22 PGAIKLSSNETP----FGPLPSVRAAIARAAAG--VNRYPD-MGAVELRAALAEHL------GVPPEHVAVGCGSVALCQ   88 (352)
T ss_pred             ccceeccCCCCC----CCCCHHHHHHHHHHHHh--cCcCCC-CcHHHHHHHHHHHh------CcCHHHEEECCCHHHHHH
Confidence            468999999954    67788999999887653  457864 79999999999999      467889999999999999


Q ss_pred             HHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298          115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (343)
Q Consensus       115 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~  194 (343)
                      .++..++++||+|+++.|+|..|...++..|.+++.+++++  ++++|++.+++.++++++++++++||||||.+++.++
T Consensus        89 ~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~  166 (352)
T PRK03321         89 QLVQATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTP--DHTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAE  166 (352)
T ss_pred             HHHHHhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCC--CCCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHH
Confidence            99999999999999999999998888899999999998764  3578999999999888999999999999999999999


Q ss_pred             HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (343)
Q Consensus       195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~  274 (343)
                      +.++++.+ ++++++|+||+|.++.+++.....+......+++++++||||.||++|+|+||++++        +++++.
T Consensus       167 l~~l~~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~--------~~~~~~  237 (352)
T PRK03321        167 LARFLDAV-PADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGH--------PEVIAA  237 (352)
T ss_pred             HHHHHHhC-CCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCC--------HHHHHH
Confidence            99999876 469999999999999886643333344445578999999999999999999999985        368888


Q ss_pred             HhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          275 MKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       275 l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +++... .++.+.++|.++ .++|.....+.+.++.+.++++.+.+.|+.. |+.+ .+.+|+|+|+++
T Consensus       238 ~~~~~~-~~~~s~~~q~~a-~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~-~~~~g~~i~i~l  302 (352)
T PRK03321        238 LRKVAV-PFSVNSLAQAAA-IASLAAEDELLERVDAVVAERDRVRAALRAA-GWTV-PPSQANFVWLPL  302 (352)
T ss_pred             HHHhcC-CCCCCHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCcc-CCCCCCEEEEeC
Confidence            876643 567788888877 5666655666666677777788899999887 7765 456789999874

>PRK05387 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.4e-39  Score=297.53  Aligned_cols=275  Identities=17%  Similarity=0.278  Sum_probs=225.9

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      ..++|+|+.|++    .+++++.+.+++++.+.+. ...|++. +.++||+++|+++      ++++++|++|+|++++|
T Consensus        23 ~~~~i~l~~~~~----~~~~~~~~~~a~~~~~~~~-~~~y~~~-~~~~lr~aia~~~------~~~~~~I~it~G~~~al   90 (353)
T PRK05387         23 LAKLIKLNTNEN----PYPPSPKVLEAIRAALGDD-LRLYPDP-NADALRQAIAAYY------GLDPEQVFVGNGSDEVL   90 (353)
T ss_pred             ccceeeccCCCC----CCCCCHHHHHHHHHHhhhh-hhcCCCC-cHHHHHHHHHHHh------CCCHHHEEEcCCHHHHH
Confidence            357899999994    3777889999998877643 4679765 6699999999998      47899999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~  193 (343)
                      ..++++++++||+|++++|+|+.|...++..|.+++.++++  +++.+|++++++    .++++++++||||||.+++.+
T Consensus        91 ~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~----~~~~v~~~~P~NPtG~~~~~~  164 (353)
T PRK05387         91 AHAFLAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLD--DDFSIDVEDYLR----PNGGIIFPNPNAPTGIALPLA  164 (353)
T ss_pred             HHHHHHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecC--CCCCCCHHHHHh----cCCEEEEeCCCCCCCCCCCHH
Confidence            99999999999999999999999999999999999999875  357799999874    357889999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  273 (343)
                      ++++|++.++  ++++|+||+|..+.  +....+  .....+++++++||||.|+++|+|+||++++        +++++
T Consensus       165 ~~~~l~~~~~--~~~livDe~y~~~~--~~~~~~--~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~--------~~~~~  230 (353)
T PRK05387        165 EIERILAANP--DSVVVIDEAYVDFG--GESAIP--LIDRYPNLLVVQTFSKSRSLAGLRVGFAIGH--------PELIE  230 (353)
T ss_pred             HHHHHHHhCC--CcEEEEeCcccccC--CcchHH--HHhhCCCEEEEEehhHhhcchhhhceeeecC--------HHHHH
Confidence            9999998654  89999999998753  322112  2233468999999999999999999999984        46888


Q ss_pred             HHhhhhcc--ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          274 RMKKYFDI--LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       274 ~l~~~~~~--~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +++.....  .++++.+.|.++ ..++.+...+-+.+++++++++.+.+.|+++ |+.+ .|.+|+|+|+++
T Consensus       231 ~l~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~~~  299 (353)
T PRK05387        231 ALNRVKNSFNSYPLDRLAQAGA-IAAIEDEAYFEETRAKVIATRERLVEELEAL-GFEV-LPSKANFVFARH  299 (353)
T ss_pred             HHHHhhccCCCCCcCHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeE-CCCcCcEEEEEC
Confidence            88776542  346778888888 6667653333348888999999999999988 7876 577889999864

>PRK04781 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=4.7e-39  Score=294.38  Aligned_cols=274  Identities=18%  Similarity=0.278  Sum_probs=220.8

Q ss_pred             ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHH
Q 019298           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV  115 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~  115 (343)
                      ..+.++..+    +.+++++..         ...+..|+++ +.++||+++++++      ++++++|++|+|++++|..
T Consensus        32 ~~~~~~~ne----~~~~~~~~~---------~~~~~~Y~~~-~~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l~~   91 (364)
T PRK04781         32 GDVWLNANE----SAWANPADP---------DASTRRYPDP-QPPGLRSALAALY------GCAPEQLLIGRGSDEAIDL   91 (364)
T ss_pred             CCEEeeCCC----CCCCCChhh---------cchhccCCCC-CHHHHHHHHHHHh------CcChHHEEEeCCHHHHHHH
Confidence            457787776    335555421         1124679875 4699999999998      5689999999999999999


Q ss_pred             HHHHhcCCC-CeEEEeCCCCcchHHHHHhcCceeEEeecCC-CCCCCCCHHHHHhhh-cCCceEEEEeCCCCCcccccCH
Q 019298          116 AMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLP-DKGWEVDLDDIESLA-DQNTVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       116 ~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~~-~~~~~~i~~~~p~nptG~~~~~  192 (343)
                      ++++++.+| |+|++++|+|..|...++..|.+++.+++.. ++++.+|++++++.. +++++++++++||||||.+++.
T Consensus        92 ~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~  171 (364)
T PRK04781         92 LVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIAL  171 (364)
T ss_pred             HHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCH
Confidence            999999888 7999999999999988899999999999853 356778999986544 5688999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  272 (343)
                      ++++++++.|++ ++++|+||+|.+|.+...   ........+++|+++||||+||++|+|+||++++        ++++
T Consensus       172 ~~~~~l~~~~~~-~~~iI~Deay~~f~~~~~---~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~--------~~l~  239 (364)
T PRK04781        172 DQIERALQALQG-KALVVVDEAYGEFSDVPS---AVGLLARYDNLAVLRTLSKAHALAAARIGSLIAN--------AELI  239 (364)
T ss_pred             HHHHHHHHhCCC-CcEEEEeCcchhhcCCcc---hHHHHhhCCCEEEEecChhhcccccceeeeeeCC--------HHHH
Confidence            999999999864 789999999999875321   1222344578999999999999999999999985        4788


Q ss_pred             HHHhhhhccccCcchHHHHHHHhccchhh--HHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          273 ERMKKYFDILGDPATFIQVCIMYGCLSTI--MQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       273 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~--~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +.+++... .++.+.+.|.++ ..+|.+.  ....+.++.++++|+.+.+.|+.++|+....|++|+|+|+++
T Consensus       240 ~~l~~~~~-~~~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~  310 (364)
T PRK04781        240 AVLRRCQA-PYPVPTPCAALA-EQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRF  310 (364)
T ss_pred             HHHHhccC-CCCCCHHHHHHH-HHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEc
Confidence            98888765 456778888877 5677653  233346678899999999999998887644789999999975

>PRK02731 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=5.5e-39  Score=295.06  Aligned_cols=280  Identities=16%  Similarity=0.244  Sum_probs=233.5

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      +.++++|+.+.+.    +++++.+++++.+....  ...|++.. ..++|+++++++      ++++++|++|+|+++++
T Consensus        31 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~~~~-~~~lr~~ia~~~------~~~~~~i~~t~G~~~~l   97 (367)
T PRK02731         31 IADIIKLASNENP----LGPSPKAIEAIRAAADE--LHRYPDGS-GFELKAALAEKF------GVDPERIILGNGSDEIL   97 (367)
T ss_pred             CCceEEecCCCCC----CCCCHHHHHHHHHHHHh--hcCCCCCc-HHHHHHHHHHHh------CcCHHHEEEcCCHHHHH
Confidence            6678999999843    56788899999887653  46898754 479999999998      56789999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~  193 (343)
                      ..++.+++++||+|++++|+|..+...+...|.+++.++.   +++.+|++.+++.++++++++++++||||||.+++.+
T Consensus        98 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~  174 (367)
T PRK02731         98 ELLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA---KDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAE  174 (367)
T ss_pred             HHHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc---cCCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHH
Confidence            9999999999999999999999998888889999998876   4577999999999988889999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  273 (343)
                      +++++++.|+ +++++|+||+|..+.+++.....+......+++++++||||.||++|+|+||++++        +++++
T Consensus       175 ~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~--------~~~~~  245 (367)
T PRK02731        175 EVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAP--------PEIID  245 (367)
T ss_pred             HHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCC--------HHHHH
Confidence            9999999885 69999999999998876543333333344568999999999999999999999985        36888


Q ss_pred             HHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +++.... .+..+.++|.++ ..++++ ..+++ .++.++++++.+.+.|+++ |+.+. |.+|+|+|+++
T Consensus       246 ~l~~~~~-~~~~~~~~~~~a-~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~~i~~  311 (367)
T PRK02731        246 ALNRVRQ-PFNVNSLALAAA-VAALDD-DAFVEKSRALNAEGMAWLTEFLAEL-GLEYI-PSVGNFILVDF  311 (367)
T ss_pred             HHHHccC-CCCCCHHHHHHH-HHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCceEEEEEC
Confidence            8877654 345677888888 666665 34544 7888899999999999988 78764 66789999874

>PRK14808 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=6.4e-39  Score=290.13  Aligned_cols=272  Identities=17%  Similarity=0.229  Sum_probs=218.4

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      .+.+.++|+.|++    .+++++.+++++.+++.....+.|+++ |.++||+++++++++.+   +++++|++|+|++++
T Consensus        17 ~~~~~i~l~~~~~----~~~~p~~~~~~~~~~~~~~~~~~Y~~~-~~~~Lr~aia~~~~~~~---~~~~~i~it~Ga~~~   88 (335)
T PRK14808         17 EKRDRTYLALNEN----PFPFPEDLVDEVFRRLNSDTLRIYYDS-PDEELIEKILSYLDTDF---LSKNNVSVGNGADEI   88 (335)
T ss_pred             CCCceeEecCCCC----CCCCCHHHHHHHHHHhhhhhhhcCCCC-ChHHHHHHHHHHhCCCC---CCcceEEEcCCHHHH
Confidence            3678899999994    488999999999887765445568764 89999999999996532   789999999999999


Q ss_pred             HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       113 l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~  192 (343)
                      |..+++.+    |.|++++|+|..|...++..|.+++.++++.+  +.++...    + ..++++++++||||||.+++.
T Consensus        89 i~~~~~~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~----~-~~~~~i~i~nP~NPTG~~~s~  157 (335)
T PRK14808         89 IYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKD--LRIPEVN----V-GEGDVVFIPNPNNPTGHVFER  157 (335)
T ss_pred             HHHHHHHh----CcEEECCCCHHHHHHHHHHcCCeEEEecCCCc--CCCChhH----c-cCCCEEEEeCCCCCCCCCcCH
Confidence            99999887    67999999999999999999999999988643  3444332    2 246889999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  272 (343)
                      +++++|+    ++++++|+||+|.+|.  +....+  .....+++++++||||+|+++|+|+||++++        ++++
T Consensus       158 ~~l~~l~----~~~~~ii~DE~Y~~f~--~~~~~~--~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~--------~~~~  221 (335)
T PRK14808        158 EEIERIL----KTGAFVALDEAYYEFH--GESYVD--LLKKYENLAVIRTFSKAFSLAAQRIGYVVSS--------EKFI  221 (335)
T ss_pred             HHHHHHH----hcCCEEEEECchhhhc--CCchHH--HHHhCCCEEEEEechhhccCcccceEEEEeC--------HHHH
Confidence            9998886    4799999999999974  222211  1233458999999999999999999999985        3688


Q ss_pred             HHHhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          273 ERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       273 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +++.+... .++.+.++|.++ ..++++...+.+.++.++++++.+.+.|+.+ |+.+..+ .|.|+|+++
T Consensus       222 ~~l~~~~~-~~~~~~~~q~a~-~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~-~g~f~~~~l  288 (335)
T PRK14808        222 DAYNRVRL-PFNVSYVSQMFA-KVALDHREIFEERTKFIVEERERMKSALREM-GYRITDS-RGNFVFIFM  288 (335)
T ss_pred             HHHHHhcC-CCCCCHHHHHHH-HHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCC-CCeEEEEeC
Confidence            88877663 456788888888 7777764444457788888899999999988 7877555 567889864

>PRK03967 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=9.7e-39  Score=289.48  Aligned_cols=271  Identities=20%  Similarity=0.271  Sum_probs=220.7

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      +...++|+.+++    .+++++.+.+++.+++.......|++ .|.+++|+++++++      ++++++|++|+|+++++
T Consensus        17 ~~~~i~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Y~~-~g~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l   85 (337)
T PRK03967         17 GNYRIWLDKNEN----PFDLPEELKEEIFEELKRVPFNRYPH-ITSDPLREAIAEFY------GLDAENIAVGNGSDELI   85 (337)
T ss_pred             CCceEEecCCCC----CCCCCHHHHHHHHHHhhcCccccCCC-CCHHHHHHHHHHHh------CcCcceEEEcCCHHHHH
Confidence            346799999994    47888999999998876545678975 68999999999999      47899999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~  193 (343)
                      ..++..+  +||+|++++|+|..|...++..|.+++.++++  .++.+|++.+++.. .+++++++++||||||.+++.+
T Consensus        86 ~~~~~~~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~  160 (337)
T PRK03967         86 SYLVKLF--EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLK--EDFTIDGERIAEKA-KNASAVFICSPNNPTGNLQPEE  160 (337)
T ss_pred             HHHHHHh--CCCeEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHH
Confidence            9988776  79999999999999988889999999999875  34779999998865 4678888999999999999988


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  273 (343)
                      ++.+++    ++++++|+||+|.++...  ...+  .....+++|+++||||+|+++|+|+||++++        +++++
T Consensus       161 ~l~~i~----~~~~~ii~De~y~~~~~~--~~~~--~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~--------~~~i~  224 (337)
T PRK03967        161 EILKVL----ETGKPVVLDEAYAEFSGK--SLIG--LIDEYPNLILLRTFSKAFGLAGIRAGYAIAN--------EEIID  224 (337)
T ss_pred             HHHHHH----hcCCEEEEECchhhhccc--chHH--HHhhCCCEEEEecchHhhcchhhhheeeecC--------HHHHH
Confidence            777665    369999999999987522  1111  1233468999999999999999999999985        46888


Q ss_pred             HHhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++++... .++.+.++|.++ ..+|++...+.+.++.+.++|+.+.+.|.++     ..|++|+|+|+++
T Consensus       225 ~~~~~~~-~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-----~~~~~~~~~~~~~  287 (337)
T PRK03967        225 ALYRIKP-PFSLNILTMKIV-RLALDHYDLIEERIDYIIKERERVRRELGEY-----AYPSDANFLLLKL  287 (337)
T ss_pred             HHHhhcC-CCCCCHHHHHHH-HHHHhCHHHHHHHHHHHHHHHHHHHHHhccC-----cCCCCCcEEEEhH
Confidence            8887765 456788999998 7777764444446677778888888888764     2578999999874

>PRK01688 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=2.2e-39  Score=295.33  Aligned_cols=272  Identities=21%  Similarity=0.293  Sum_probs=221.1

Q ss_pred             ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHH
Q 019298           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV  115 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~  115 (343)
                      ..++|+.++    +.+++++.+        .....+.|++. ...++++.+++++      ++++++|++|+|++++|..
T Consensus        29 ~~~~l~~Ne----np~~~~~~~--------~~~~~~~Yp~~-~~~~l~~~~a~~~------g~~~~~I~~~~Gs~e~i~~   89 (351)
T PRK01688         29 GDVWLNANE----YPTAVEFQL--------TQQTLNRYPEC-QPKAVIENYAAYA------GVKPEQVLVSRGADEGIEL   89 (351)
T ss_pred             CceEecCCC----CCCCCChhh--------cccccccCCCC-ChHHHHHHHHHHh------CCCHHHEEEcCCHHHHHHH
Confidence            469999998    346666543        11235679875 3589999999998      6799999999999999999


Q ss_pred             HHHHhcCCC-CeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298          116 AMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (343)
Q Consensus       116 ~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~  194 (343)
                      ++++++++| |.|+++.|+|..|...++..|.+++.+++++  ++.+|++++++++ ++++++++||||||||..++.++
T Consensus        90 ~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~--~~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~~  166 (351)
T PRK01688         90 LIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLD--NWQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQD  166 (351)
T ss_pred             HHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCC--CCCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHHH
Confidence            999999887 8999999999999999999999999998853  4789999999887 57899999999999999999999


Q ss_pred             HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (343)
Q Consensus       195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~  274 (343)
                      +++|++.|++ +.++|+||+|.+|.... .  ....+...+++++++||||+||++|+|+||++++        +++++.
T Consensus       167 l~~l~~~~~~-~~~vivDEay~~f~~~~-s--~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~--------~~~i~~  234 (351)
T PRK01688        167 LRTLLELTRG-KAIVVADEAYIEFCPQA-S--LAGWLAEYPHLVILRTLSKAFALAGLRCGFTLAN--------EEVINL  234 (351)
T ss_pred             HHHHHHhCCC-CcEEEEECchhhcCCCC-C--hHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCC--------HHHHHH
Confidence            9999999986 68899999999986321 1  1122344568999999999999999999999984        478888


Q ss_pred             HhhhhccccCcchHHHHHHHhccchhh-HHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          275 MKKYFDILGDPATFIQVCIMYGCLSTI-MQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       275 l~~~~~~~~~~~~~~~~a~~~~~l~~~-~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +++... .++++.+.+.++ ..+|.+. .++++ .++.+.++|+.+.+.|+.++++....|++|+|+|+++
T Consensus       235 l~~~~~-~~~v~~~~~~~a-~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~  303 (351)
T PRK01688        235 LLKVIA-PYPLSTPVADIA-AQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARF  303 (351)
T ss_pred             HHhccC-CCCCCHHHHHHH-HHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEc
Confidence            887764 355677777666 5566542 24554 7788889999999999998777645788999999864

>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=7.5e-39  Score=277.29  Aligned_cols=264  Identities=26%  Similarity=0.397  Sum_probs=233.1

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHhhhCC--CCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhc-C
Q 019298           69 KFNGYAPTAGLPLTRRAIAEYLSRDLP--YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFR-H  145 (343)
Q Consensus        69 ~~~~Y~~~~g~~~lr~~ia~~~~~~~~--~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~-g  145 (343)
                      ....|.+..|.+.+|+++|+|+.+.+|  ...+|++++++.|++.++.+++..|.+|||..++|.|.|+++..-++.. |
T Consensus       113 ~la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTg  192 (471)
T KOG0256|consen  113 ELAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTG  192 (471)
T ss_pred             hHhhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccC
Confidence            345788888999999999999998665  4578999999999999999999999999999999999999998766654 8


Q ss_pred             ceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298          146 IEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV  219 (343)
Q Consensus       146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~  219 (343)
                      .+++++.+..++++.++.+++|+++.+      +.+.++++||+||.|.+++++++..++++++++|+++|+||+|+..+
T Consensus       193 veivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sV  272 (471)
T KOG0256|consen  193 VEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSV  272 (471)
T ss_pred             ceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccc
Confidence            899999999999999999999987753      67889999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCcccccC-----CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHH
Q 019298          220 FGDKPFVPMGVFG-----STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIM  294 (343)
Q Consensus       220 ~~~~~~~~~~~~~-----~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~  294 (343)
                      |+...+.++.++.     ..+++.+++|+||.||+||+|+|.+..-+       ..++...+++.. ++.+++..|..+ 
T Consensus       273 F~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~n-------e~VvsaA~kmss-f~~vSs~tQ~~l-  343 (471)
T KOG0256|consen  273 FDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNN-------EDVVSAATKMSS-FGLVSSQTQYLL-  343 (471)
T ss_pred             cCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecC-------hHHHHHHHHHhh-ccCCcHHHHHHH-
Confidence            9988777655542     34579999999999999999999999864       457887777765 678899999999 


Q ss_pred             hccchhhHHHHH-----HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          295 YGCLSTIMQIMI-----HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       295 ~~~l~~~~~~l~-----~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ..+|++ .+|.+     ..++++.+..++.+.|+++ |++++..++|+|+|+||
T Consensus       344 a~LLSD-~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl~s~AGlF~wvDl  395 (471)
T KOG0256|consen  344 ASLLSD-EEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPCLKSNAGLFCWVDL  395 (471)
T ss_pred             HHHhch-HHHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCceeecCCeeEEEEEh
Confidence            888887 55555     8888999999999999999 99999999999999986

>TIGR01141 hisC histidinol-phosphate aminotransferase

Probab=100.00  E-value=3.9e-38  Score=287.24  Aligned_cols=280  Identities=21%  Similarity=0.351  Sum_probs=232.4

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      +.++|||++|++    .+++++.+++++.++...  ...|+++.+ +++|+++++++      ++++++|++++|+++++
T Consensus        18 ~~~~i~l~~~~~----~~~~~~~~~~a~~~~~~~--~~~y~~~~~-~~lr~~ia~~~------~~~~~~i~~~~G~~~~l   84 (346)
T TIGR01141        18 GKEVIKLNSNEN----PFGPPPKAKEALRAEADK--LHRYPDPDP-AELKQALADYY------GVDPEQILLGNGSDEII   84 (346)
T ss_pred             CCceEEccCCCC----CCCCCHHHHHHHHHhHHH--hhcCCCCCH-HHHHHHHHHHh------CcChHHEEEcCCHHHHH
Confidence            468999999995    377889999999987642  357887665 99999999999      46789999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~  193 (343)
                      ..++++++++||+|++++|+|+.+...++..|.+++.++++.+  +.+|++++++.++++++++++++|+||||.+++.+
T Consensus        85 ~~~~~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~  162 (346)
T TIGR01141        85 ELLIRAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDED--GQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRS  162 (346)
T ss_pred             HHHHHHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCC--CCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHH
Confidence            9999999999999999999999988888999999999987643  66899999998887899999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  273 (343)
                      +++++++.++ +++++|+|++|..+...+..   .......+++++++|+||.|+++|+|+||++++        +++++
T Consensus       163 ~~~~l~~~~~-~~~~ii~D~~y~~~~~~~~~---~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~--------~~~~~  230 (346)
T TIGR01141       163 DIEAVLERTP-EDALVVVDEAYGEFSGEPST---LPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIAN--------AEIID  230 (346)
T ss_pred             HHHHHHHhCC-CCcEEEEECchhhhcCCccH---HHHHhhCCCEEEEehhhHhhhchhhhceeeecC--------HHHHH
Confidence            9999999987 79999999999976643221   111223347899999999999999999999984        36888


Q ss_pred             HHhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +++.... .++.++++|.++ ..++++...+.+.+++++++++.+.+.|++++|+.+ .|.+|+|+|+++
T Consensus       231 ~~~~~~~-~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~g~~~~~~~  297 (346)
T TIGR01141       231 ALNKVRA-PFNLSRLAQAAA-IAALRDDDFIEKTVEEINAERERLYDGLKKLPGLEV-YPSDANFVLIRF  297 (346)
T ss_pred             HHHhccC-CCCCCHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE-CCCcCCEEEEec
Confidence            8877654 356678888887 666766443334889999999999999998888885 566789999864

Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.

>PRK07908 hypothetical protein; Provisional

Probab=100.00  E-value=3.1e-37  Score=281.38  Aligned_cols=271  Identities=20%  Similarity=0.263  Sum_probs=217.8

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      ..+.+||+.++    +.+++++.+++++.+.+.+  ...|+++.|.+++|+++++++      ++++++|++|+|+++++
T Consensus        21 ~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~------~~~~~~I~it~Ga~~al   88 (349)
T PRK07908         21 GPGLLDFAVNV----RHDTPPEWLRERLAARLGD--LAAYPSTEDERRARAAVAARH------GRTPDEVLLLAGAAEGF   88 (349)
T ss_pred             CCCeEEecCCC----CCCCCCHHHHHHHHHHhhH--hhcCCCccchHHHHHHHHHHh------CcChhhEEECCCHHHHH
Confidence            67899999999    4477889999999988753  457998889999999999998      56899999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~  193 (343)
                      ..+++ + ++| .+++..|+|..+...++..|.+++.++++.+  +.+|++.+    +++++++++++||||||.+++.+
T Consensus        89 ~~~~~-l-~~~-~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~--~~~d~~~l----~~~~~~i~l~np~NPTG~~~~~~  159 (349)
T PRK07908         89 ALLAR-L-RPR-RAAVVHPSFTEPEAALRAAGIPVHRVVLDPP--FRLDPAAV----PDDADLVVIGNPTNPTSVLHPAE  159 (349)
T ss_pred             HHHHh-c-CCC-eEEEeCCCChHHHHHHHHcCCEEEeeccCcc--cCcChhHh----ccCCCEEEEcCCCCCCCCCcCHH
Confidence            99988 4 564 6677899999999999999999999988643  67888865    34678999999999999999987


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  273 (343)
                      ++.++   |+ ++.++|+||+|.++..+ . ..++... ..+++++++||||.|+++|+|+||++++        +++++
T Consensus       160 ~l~~l---~~-~~~~iIvDe~y~~~~~~-~-~~~l~~~-~~~~~i~i~S~SK~~~l~GlRiG~~~~~--------~~~~~  224 (349)
T PRK07908        160 QLLAL---RR-PGRILVVDEAFADAVPG-E-PESLAGD-DLPGVLVLRSLTKTWSLAGLRVGYALGA--------PDVLA  224 (349)
T ss_pred             HHHHH---Hh-cCCEEEEECcchhhccC-C-ccccccc-cCCCEEEEeecccccCCccceeeeeecC--------HHHHH
Confidence            66555   54 47889999999987543 2 2333332 3357999999999999999999999984        46888


Q ss_pred             HHhhhhccccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          274 RMKKYFDILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +++.... .+..++..+.++ .+++.. ...+++ .+++++++++.+.+.|+++ |+.+..|++|+|+|+++
T Consensus       225 ~~~~~~~-~~~~~~~~~~a~-~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~~~~~~~  293 (349)
T PRK07908        225 RLTRGRA-HWPVGTLQLEAI-AACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GARVVDPAAAPFVLVRV  293 (349)
T ss_pred             HHHhcCC-CCCccHHHHHHH-HHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcEeccCCCceEEEEEC
Confidence            8876654 345666667666 555542 223444 8889999999999999988 88887889999999975

>PRK06425 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=2.3e-37  Score=279.98  Aligned_cols=262  Identities=17%  Similarity=0.172  Sum_probs=204.0

Q ss_pred             ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHH
Q 019298           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV  115 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~  115 (343)
                      .+++|+.++    ++++.             ....+.|+.+ ...+||+++++++      ++++++|++|+|++++|..
T Consensus        17 ~~i~l~~Ne----np~~~-------------~~~~~~Yp~~-~~~~lr~~ia~~~------~~~~~~I~it~Gs~~~l~~   72 (332)
T PRK06425         17 RIIDFSANI----NDFMD-------------IGDISIYPEI-SYTDIEDQIKIYT------QGLKIKVLIGPGLTHFIYR   72 (332)
T ss_pred             CEEEecccc----CCCcC-------------hhhcccCcCc-CHHHHHHHHHHHh------CCCcceEEECCCHHHHHHH
Confidence            679999998    33321             1124579764 5799999999999      5789999999999999999


Q ss_pred             HHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHH
Q 019298          116 AMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHL  195 (343)
Q Consensus       116 ~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l  195 (343)
                      +++ ++++| .|++++|+|+.|...++..|.+++.++++.   +.+|.+.+++   .+++++++|+||||||.+++.+++
T Consensus        73 ~~~-~~~~~-~vv~~~P~y~~y~~~~~~~G~~v~~vp~~~---~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~  144 (332)
T PRK06425         73 LLS-YINVG-NIIIVEPNFNEYKGYAFTHGIRISALPFNL---INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSL  144 (332)
T ss_pred             HHH-HhCCC-cEEEeCCChHHHHHHHHHcCCeEEEEeCCc---ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHH
Confidence            997 45776 566779999999999999999999998853   3456665553   378899999999999999999999


Q ss_pred             HHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHH
Q 019298          196 QKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM  275 (343)
Q Consensus       196 ~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l  275 (343)
                      ++|+++|+++++++|+||+|.++.+++. ..........+++|+++||||+|+++|+|+||++++        +++++.+
T Consensus       145 ~~l~~~a~~~~~~iI~DE~Y~~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~--------~~li~~l  215 (332)
T PRK06425        145 LTISEICRKKGALLFIDEAFIDFVPNRA-EEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATD--------DYNMKIS  215 (332)
T ss_pred             HHHHHHHHHcCCEEEEecchhccccccc-hhHHHHhccCCCEEEEeecHHhcCCchhhheeeecC--------HHHHHHH
Confidence            9999999999999999999999986542 112222234468999999999999999999999985        3688888


Q ss_pred             hhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          276 KKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       276 ~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++... .+..+..++.++ .. . ....+++ .++.++++|+.+.+.|+++ |+.+..+.+|+|+|+++
T Consensus       216 ~~~~~-~~~~~~~~~~~l-~~-~-~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~g~f~~~~~  279 (332)
T PRK06425        216 RKITE-PWSVCDPAIDFI-RS-I-DLDYVAKHSLDIMENERSYLINNLEAM-GFRAAGDPSANFITFMI  279 (332)
T ss_pred             HHcCC-CCccCHHHHHHH-HH-h-hhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCceEEEEEc
Confidence            77654 233444443333 11 1 1133443 7889999999999999998 78775567889999864

>PRK04635 histidinol-phosphate aminotransferase; Provisional

Probab=100.00  E-value=1.8e-37  Score=283.24  Aligned_cols=270  Identities=19%  Similarity=0.295  Sum_probs=214.2

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~  114 (343)
                      .+.++|+.+++    .+++++.+     . .  ...+.|++. +.++||+++|+++      ++++++|++|+|++++|.
T Consensus        31 ~~~~~l~~ne~----~~~~~~~~-----~-~--~~~~~Yp~~-~~~~Lr~aia~~~------~~~~~~I~it~Gs~~~i~   91 (354)
T PRK04635         31 RGDIWINANES----PFNNEYKL-----D-L--ARLNRYPEC-QPPELINAYSAYA------GVAPEQILTSRGADEAIE   91 (354)
T ss_pred             CCcEEeeCCCC----CCCCChhh-----h-h--HHhccCCCC-CHHHHHHHHHHHh------CcCHHHEEEeCCHHHHHH
Confidence            45699999984    35555533     1 1  124679885 5799999999998      679999999999999999


Q ss_pred             HHHHHhcCCC-CeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298          115 VAMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       115 ~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~  193 (343)
                      .++++++++| |+|+++.|+|..|...++..|.+++.++++.  ++.+|.+.++. + ++++++++|+||||||.+++.+
T Consensus        92 ~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~~  167 (354)
T PRK04635         92 LLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTA--DYQLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDRA  167 (354)
T ss_pred             HHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCC--CCCCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCHH
Confidence            9999999998 9999999999999999999999999998853  46789988873 3 5789999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  273 (343)
                      ++++|++.|+  ++++|+||+|.++.... ....  .....+++++++||||+||++|+|+||++++        +++++
T Consensus       168 ~l~~l~~~~~--~~~vivDeay~~~~~~~-s~~~--~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~--------~~~~~  234 (354)
T PRK04635        168 DIEQLIEMTP--DAIVVVDEAYIEFCPEY-SVAD--LLASYPNLVVLRTLSKAFALAGARCGFTLAN--------EELIE  234 (354)
T ss_pred             HHHHHHHhCC--CcEEEEeCchHhhccCc-chHH--HHhhCCCEEEEechHHHhhhhHHHHhhhhCC--------HHHHH
Confidence            9999999887  49999999999876331 1111  1233468999999999999999999999884        46888


Q ss_pred             HHhhhhccccCcchHHHHHHHhccchhh-HHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          274 RMKKYFDILGDPATFIQVCIMYGCLSTI-MQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~-~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      .+..... .++.+...|.++ .++|.+. .++++ .++.++++|+.+.+.|++++++.+.++ +|+|+|+++
T Consensus       235 ~l~~~~~-~~~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~g~f~~~~~  303 (354)
T PRK04635        235 ILMRVIA-PYPVPLPVSEIA-TQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLEG-NGNYVLAKF  303 (354)
T ss_pred             HHHhhcC-CCCCCHHHHHHH-HHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCC-CCcEEEEEC
Confidence            8876544 345666677666 5555432 23333 778899999999999999866776544 578999864

>PRK05664 threonine-phosphate decarboxylase; Reviewed

Probab=100.00  E-value=1.9e-36  Score=273.75  Aligned_cols=255  Identities=15%  Similarity=0.167  Sum_probs=199.5

Q ss_pred             cceeEeccCCCCCCCCCCCc-HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           35 KKVISLAMGDPTVHSCFHTT-HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      .++|+|+.++.    +++++ +.+.+   ..     ...|+..  ..+||+++++++        .+++|++|+|++++|
T Consensus        20 ~~~i~l~~ne~----p~~~~~~~~~~---~~-----~~~yp~~--~~~Lr~~ia~~~--------~~~~I~it~Gs~~al   77 (330)
T PRK05664         20 ADWLDLSTGIA----PWPWPVPAIPA---DA-----WARLPET--DDGLEAAARAYY--------GAPQLLPVAGSQAAI   77 (330)
T ss_pred             HHheeecCCcC----CCCCCCcccCH---HH-----HHhCCCC--hHHHHHHHHHHh--------CCCCEEECcCHHHHH
Confidence            46799999972    23333 22221   12     2348653  489999999998        358999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~  193 (343)
                      ..++.  +.+||+|++++|+|+.|...++..|.+++.+++          +.+++.++ +++++++++||||||.+++.+
T Consensus        78 ~~~~~--~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~----------~~~~~~~~-~~~~v~l~nP~NPTG~~~s~~  144 (330)
T PRK05664         78 QALPR--LRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDE----------AEVEAALD-SLDVLVVVNPNNPTGRRFDPA  144 (330)
T ss_pred             HHHHH--ccCCCEEEEcCCChHHHHHHHHHcCCeEEEech----------hhHhhhhc-CCCEEEEeCCcCCCCCccCHH
Confidence            98863  579999999999999999999999999998865          23444443 567899999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  273 (343)
                      ++++|+++|+++++++|+||+|.++..    ..++..+...+++++++||||+||++|+|+||++++        +++++
T Consensus       145 ~l~~l~~~~~~~~~~iI~DE~y~~~~~----~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~--------~~l~~  212 (330)
T PRK05664        145 RLLAWHARLAARGGWLVVDEAFMDNTP----QHSLAACAHRPGLIVLRSFGKFFGLAGARLGFVLAE--------PALLR  212 (330)
T ss_pred             HHHHHHHHHHhcCCEEEEECCcccCCC----cccccccccCCCEEEEeeccccccCCCcceEEEEeC--------HHHHH
Confidence            999999999999999999999987641    123344445568999999999999999999999985        36888


Q ss_pred             HHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCc--eEeeecC
Q 019298          274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGS--SLKYLDL  343 (343)
Q Consensus       274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g--~~~~~~l  343 (343)
                      .+.+... .+..+...|.++ ..+|.+. .+.+ .++.++++++.+.+.|+++ |+.   +.+|  +|+|+++
T Consensus       213 ~~~~~~~-~~~~~~~~~~~~-~~~L~~~-~~~~~~~~~~~~~r~~l~~~L~~~-~~~---~~~~~~~f~~~~~  278 (330)
T PRK05664        213 ALAELLG-PWTVSGPTRWLA-QAALADT-PWQRRQRERLLAASQRLAALLRRH-GLT---PAGGCALFQWVRT  278 (330)
T ss_pred             HHHHhcC-CCCCCHHHHHHH-HHHHhCh-HHHHHHHHHHHHHHHHHHHHHHHC-CCc---ccCCcceEEEEec
Confidence            8887654 345677888887 6667653 3344 8889999999999999987 653   3444  8888863

>PRK06959 putative threonine-phosphate decarboxylase; Provisional

Probab=100.00  E-value=1.7e-36  Score=274.64  Aligned_cols=258  Identities=14%  Similarity=0.160  Sum_probs=203.0

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEecChHHHH
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVTSGCTQAI  113 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~~~~g~~~al  113 (343)
                      ..+++|+.++    +++++++.....  ..     +..|+++ . .+||+++++++      ++. +++|++|+|++++|
T Consensus        24 ~~~i~ls~Ne----np~~~~~~~~~~--~~-----~~~Yp~~-~-~~L~~~ia~~~------~~~~~~~I~i~~Gs~e~i   84 (339)
T PRK06959         24 DAWLDLSTGI----NPHGYPVPPVPA--DA-----WRRLPED-D-DGLAACAARYY------GAPDAAHVLPVAGSQAAI   84 (339)
T ss_pred             hhhceeccCC----CCCCCCCCCCCH--HH-----HHhCCCc-h-HHHHHHHHHHh------CCCCcccEEECcCHHHHH
Confidence            5679999999    334444211111  11     3468864 3 89999999998      444 58999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~  193 (343)
                      ..+.. ++++|+ |+++.|+|..|...++..|.+++.++.+.        +.+.    +..+++++|+||||||.+++.+
T Consensus        85 ~~l~~-~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~--------~~~~----~~~~~v~l~nPnNPTG~~~s~~  150 (339)
T PRK06959         85 RALPA-LLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA--------DTLP----AALTHLIVVNPNNPTAERLPAA  150 (339)
T ss_pred             HHHHH-hcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc--------hhcc----ccCCEEEEeCCCCCCCCCCCHH
Confidence            97765 567776 88899999999999999999998886532        2222    2456899999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  273 (343)
                      +++++++.|++++.++|+||+|.++.+.    .++..+...+++|+++||||.||++|+|+||++++        +++++
T Consensus       151 ~l~~l~~~~~~~~~~vI~DEay~~~~~~----~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~--------~~li~  218 (339)
T PRK06959        151 RLLRWHAQLAARGGTLIVDEAFADTLPA----ASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAA--------PALLA  218 (339)
T ss_pred             HHHHHHHHHHHcCCEEEEECCCccCCCc----ccchhccCCCCEEEEecChhhcCCcchheEEEecC--------HHHHH
Confidence            9999999999999999999999997643    22223323467999999999999999999999985        47899


Q ss_pred             HHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++++... .++.+.++|.++ .++|.+ .++.+ .++.++++|+.+.+.|+++ |+.+.  .+++|+|+++
T Consensus       219 ~l~~~~~-~~~vs~~~q~a~-~~~L~~-~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~--~~~~f~~~~~  283 (339)
T PRK06959        219 ALRDALG-AWTVSGPARHAV-RAAFAD-AAWQAAMRERLAADGARLAALLRAH-GFAVH--ATPLFSWTDD  283 (339)
T ss_pred             HHHHhcC-CCCCcHHHHHHH-HHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHC-CCCcc--CcceEEEEeC
Confidence            9988765 456788889888 777776 44555 8899999999999999998 77763  3689999874

>PRK00950 histidinol-phosphate aminotransferase; Validated

Probab=100.00  E-value=2.9e-36  Score=276.42  Aligned_cols=272  Identities=18%  Similarity=0.286  Sum_probs=217.9

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE-ecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV-TSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~-~~g~~~a  112 (343)
                      +.++++|+.+++    .++++|.+++++.+.+..  ...|+++. .+++|+++++++      ++++++|++ ++|++++
T Consensus        33 ~~~~i~l~~~~~----~~~~~~~~~~~~~~~~~~--~~~y~~~~-~~~lr~~ia~~~------~~~~~~i~~~~~Ga~~~   99 (361)
T PRK00950         33 PESIIKLGSNEN----PLGPSPKAVEAIEKELSK--IHRYPEPD-APELREALSKYT------GVPVENIIVGGDGMDEV   99 (361)
T ss_pred             ccceEEccCCCC----CCCCCHHHHHHHHHHHHh--hcCCCCCC-HHHHHHHHHHHh------CCCHHHEEEeCCCHHHH
Confidence            448899999984    477888899988887653  35788754 499999999998      568899999 7899999


Q ss_pred             HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       113 l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~  192 (343)
                      +..++++++++||.|++++|+|..+...++..|.+++.++.+  +++.+|++++++.++++++++++++|+||||.+++.
T Consensus       100 i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~  177 (361)
T PRK00950        100 IDTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKRE--EDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPE  177 (361)
T ss_pred             HHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCH
Confidence            999999999999999999999999988889999999888743  457899999999888788999999999999999998


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  272 (343)
                      +++.+++   +++|+++|+||+|.++.  +.....+  ....+++++++||||+||++|+|+||++++        ++++
T Consensus       178 ~~l~~l~---~~~~~~li~De~y~~~~--~~~~~~~--~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~--------~~~~  242 (361)
T PRK00950        178 EDIRKIL---ESTDALVFVDEAYVEFA--EYDYTPL--ALEYDNLIIGRTFSKVFGLAGLRIGYGFVP--------EWLI  242 (361)
T ss_pred             HHHHHHH---HHCCcEEEEECchhhhC--ccchHHH--HHhcCCEEEEEeehHhhcCchhhcchhcCC--------HHHH
Confidence            8776665   57799999999999875  2221121  223358999999999999999999999985        3688


Q ss_pred             HHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          273 ERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       273 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +.+++... .+..+.+.|.++ ..++.+ .++++ .+++++++++.+.+.|.    +.+ .|++|+|+|+++
T Consensus       243 ~~~~~~~~-~~~~~~~~~~~a-~~~l~~-~~~~~~~~~~~~~~r~~l~~~l~----~~~-~~~~~~~i~~~~  306 (361)
T PRK00950        243 DYYMRAKT-PFSLTRLSQAAA-IAALSD-KEYIEKSIEHGIKSREYLYNELP----FKV-YPSEANFVLVDV  306 (361)
T ss_pred             HHHHHhcC-CCCCCHHHHHHH-HHHhcC-HHHHHHHHHHHHHHHHHHHhhcC----eeE-CCCcceEEEEEC
Confidence            88877654 345677788777 566665 34444 77788888888877765    444 577899999874

>PRK08354 putative aminotransferase; Provisional

Probab=100.00  E-value=3.7e-35  Score=263.22  Aligned_cols=239  Identities=17%  Similarity=0.213  Sum_probs=184.3

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      +.++|+|+.+.+    .++ ++.+.+++.+++..  .+.|+.   ...+|+++++++.         ++|++|+|++++|
T Consensus         7 ~~~~i~l~~~~n----p~~-p~~~~~a~~~~~~~--~~~yp~---~~~l~~~ia~~~~---------~~I~vt~G~~~al   67 (311)
T PRK08354          7 EEGLIDFSASVN----PYP-PEWLDEMFERAKEI--SGRYTY---YEWLEEEFSKLFG---------EPIVITAGITEAL   67 (311)
T ss_pred             ccceeEecCCCC----CCC-CHHHHHHHHHHHHH--hhcCCC---hHHHHHHHHHHHC---------CCEEECCCHHHHH
Confidence            567899999972    344 47888888887653  456864   4789999999982         5899999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~  193 (343)
                      ..++..+ .+||+|++++|+|+.|...++..|.+++.+        .+|++.+++.++ +++++++++||||||.+++.+
T Consensus        68 ~~~~~~~-~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~~  137 (311)
T PRK08354         68 YLIGILA-LRDRKVIIPRHTYGEYERVARFFAARIIKG--------PNDPEKLEELVE-RNSVVFFCNPNNPDGKFYNFK  137 (311)
T ss_pred             HHHHHhh-CCCCeEEEeCCCcHHHHHHHHHcCCEEeec--------CCCHHHHHHhhc-CCCEEEEecCCCCCCCccCHH
Confidence            9888544 589999999999999999999999998764        257889988776 567899999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  273 (343)
                      ++++|+++|+++|+++|+||+|.+|.+++...       ..+++++++||||+|+++|+|+||+++           +.+
T Consensus       138 ~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~-------~~~~vi~~~S~SK~~~l~GlRiG~~v~-----------~~~  199 (311)
T PRK08354        138 ELKPLLDAVEDRNALLILDEAFIDFVKKPESP-------EGENIIKLRTFTKSYGLPGIRVGYVKG-----------FEE  199 (311)
T ss_pred             HHHHHHHHhhhcCcEEEEeCcchhcccccccc-------CCCcEEEEeccHhhcCCccceeeeeee-----------hHH
Confidence            99999999999999999999999998764311       146899999999999999999999997           344


Q ss_pred             HHhhhhccccCcchHHHHHHHhccchhhHHH-HHHHHHHHHHHHHHHHh
Q 019298          274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQI-MIHGNFLENFAGSCVPS  321 (343)
Q Consensus       274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~-l~~~~~~~~~~~~~~~~  321 (343)
                      .++.... .+..+...+.++ ..++.+..++ .+.++.++++++.+.+.
T Consensus       200 ~l~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~  246 (311)
T PRK08354        200 AFRSVRM-PWSIGSTGYAFL-EFLIEDDFEHLRKTMPLIWREKERFEKA  246 (311)
T ss_pred             HHHHcCC-CccCCHHHHHHH-HHHHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence            5554443 344555666666 5555432122 22445555555544433

>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase

Probab=100.00  E-value=2.4e-35  Score=266.64  Aligned_cols=264  Identities=18%  Similarity=0.218  Sum_probs=212.4

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      .+..++|+.|.+.    ++++  ..+.   .  .....+|+++.+ +++|+.+++++      ++++++|++|+|+++++
T Consensus        16 ~~~~~~~~~~~~~----~~~~--~~~~---~--~~~~~~y~~~~~-~~lr~~la~~~------~~~~~~i~~t~G~~~~i   77 (330)
T TIGR01140        16 PEDWLDFSTGINP----LGPP--VPPI---P--ASAWARYPDPEY-DELRAAAAAYY------GLPAASVLPVNGAQEAI   77 (330)
T ss_pred             hhheeEccccCCC----CCCC--hhhc---c--hHHHhhCCCccH-HHHHHHHHHHh------CCChhhEEECCCHHHHH
Confidence            5568999999843    3322  2111   1  113467988765 99999999998      46789999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~  193 (343)
                      ..+... +.+| .|++++|+|..+...++..|.+++.++         |++.+++.++ +++++++++||||||.+++.+
T Consensus        78 ~~~~~~-l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~---------d~~~l~~~~~-~~~~v~i~~p~NPtG~~~~~~  145 (330)
T TIGR01140        78 YLLPRL-LAPG-RVLVLAPTYSEYARAWRAAGHEVVELP---------DLDRLPAALE-ELDVLVLCNPNNPTGRLIPPE  145 (330)
T ss_pred             HHHHHH-hCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC---------CHHHHHhhcc-cCCEEEEeCCCCCCCCCCCHH
Confidence            998766 4677 799999999999999999999988875         6888988884 577899999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccc-cCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV-FGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~-~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  272 (343)
                      ++++|+++|+++|+++|+||+|..+.+..    ++.. .+..+++|+++||||.||++|+|+||++++        ++++
T Consensus       146 ~~~~l~~~a~~~~~~ii~De~y~~~~~~~----~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~--------~~~~  213 (330)
T TIGR01140       146 TLLALAARLRARGGWLVVDEAFIDFTPDA----SLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAH--------PALL  213 (330)
T ss_pred             HHHHHHHHhHhcCCEEEEECcccccCCcc----chhhHhccCCCEEEEEecchhhcCchhhhhheeCC--------HHHH
Confidence            99999999999999999999999887542    1221 233468999999999999999999999985        3688


Q ss_pred             HHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          273 ERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       273 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +++..... .+.++.++|.++ ..++++ ..|.+ .+++++++++.+.+.|++++++.+ .|.+|+|+|+++
T Consensus       214 ~~l~~~~~-~~~~s~~~q~~~-~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~f~~~~~  281 (330)
T TIGR01140       214 ARLREALG-PWTVNGPARAAG-RAALAD-TAWQAATRARLAAERARLAALLARLGGLEV-VGGTALFLLVRT  281 (330)
T ss_pred             HHHHhcCC-CCCchHHHHHHH-HHHHhc-hHHHHHHHHHHHHHHHHHHHHHHhCCCceE-CCCCCeEEEEEc
Confidence            88877654 456678888888 677765 34544 789999999999999999855665 567899999874

This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.

>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=4.9e-35  Score=253.35  Aligned_cols=325  Identities=18%  Similarity=0.196  Sum_probs=252.7

Q ss_pred             CccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCC-CCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHH
Q 019298            5 NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHS-CFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR   83 (343)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr   83 (343)
                      +.....|++  +|..+...+..+.     ++++|||++|...... ..+..+.++++-+....+.....|.|..|.++++
T Consensus         3 ~~i~~~p~D--pIlgL~e~f~~D~-----R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~   75 (396)
T COG1448           3 EKIEAAPAD--PILGLKEAFKADP-----RPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFL   75 (396)
T ss_pred             cccccCCCC--chhHHHHHHhcCC-----CcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHH
Confidence            445667777  8999999999987     7899999999844322 3667788888877777777788999999999999


Q ss_pred             HHHHHHHhhhCCCC---CCCCcE--EEecChHHHHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCC
Q 019298           84 RAIAEYLSRDLPYK---LTPNDV--FVTSGCTQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD  156 (343)
Q Consensus        84 ~~ia~~~~~~~~~~---~~~~~i--~~~~g~~~al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~  156 (343)
                      +++++++   +|..   +..+++  +-|.|+|+||......+.  .+..+|++++|+|+++.......|+++..+++...
T Consensus        76 ~~~~~ll---FG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~  152 (396)
T COG1448          76 EAVQKLL---FGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDA  152 (396)
T ss_pred             HHHHHHh---cCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeecccc
Confidence            9999999   5533   455555  678999999999988874  46678999999999999999999999999998877


Q ss_pred             CCCCCCHHHHHhhhcC--CceEEEEe-CCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCC-CCCCcccccC
Q 019298          157 KGWEVDLDDIESLADQ--NTVALVII-NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD-KPFVPMGVFG  232 (343)
Q Consensus       157 ~~~~~d~~~l~~~~~~--~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~-~~~~~~~~~~  232 (343)
                      .+..+|++.+...++.  ...++++. .+|||||..++.++|++|+++.++++.+.+.|-||++|..+- ++...++.+.
T Consensus       153 ~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a  232 (396)
T COG1448         153 ETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFA  232 (396)
T ss_pred             ccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHH
Confidence            7778999998887764  23344444 449999999999999999999999999999999999987653 2222333332


Q ss_pred             C-CCCEEEEccCccccCCCCCcEEEEE--EeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhh---HHHH
Q 019298          233 S-TVPILTLGSLSKRWIVPGWRLGWFV--TTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTI---MQIM  305 (343)
Q Consensus       233 ~-~~~~i~~~S~sK~~~~~G~r~G~i~--~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~---~~~l  305 (343)
                      . ...++++.|+||+||++|.|+|.+.  +.+.+..   ..+..+++.. +..+++||......+ ..+|+++   +.|.
T Consensus       233 ~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a---~~v~sqlk~~iR~~ySnPP~~Ga~vv-a~IL~~p~Lra~W~  308 (396)
T COG1448         233 EVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEA---DRVLSQLKAIIRTNYSNPPAHGAAVV-ATILNNPELRAEWE  308 (396)
T ss_pred             HhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHH---HHHHHHHHHHHHhccCCCchhhHHHH-HHHhCCHHHHHHHH
Confidence            2 2248999999999999999999943  3332100   1233344444 445778888888877 8888875   4555


Q ss_pred             H----HHHHHHHHHHHHHHhhcCC-C--CceeeCCCCceEeeecC
Q 019298          306 I----HGNFLENFAGSCVPSYKLI-P--ELINFKSTGSSLKYLDL  343 (343)
Q Consensus       306 ~----~~~~~~~~~~~~~~~L~~~-~--g~~~~~~~~g~~~~~~l  343 (343)
                      .    +++++.++|..+.+.|+.. +  .|.++..+.|||-+..|
T Consensus       309 ~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gl  353 (396)
T COG1448         309 QELEEMRQRILEMRQALVDALKALGAPRNFDFIISQRGMFSYTGL  353 (396)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhhcCceeecCCC
Confidence            4    9999999999999999873 2  37777889999988754

>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=2.6e-33  Score=233.78  Aligned_cols=313  Identities=24%  Similarity=0.322  Sum_probs=230.5

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHH----HHHHhcC----CCCC
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAV----AEALLSE----KFNG   72 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~----~~~~~~~----~~~~   72 (343)
                      |.+|..+.++..- .++.++++++-+..+    .++.|.|+.|.|.      ..|++.+..    .+.+..+    ...+
T Consensus         1 m~fs~fGdkft~~-sGi~~lMdDl~d~Lr----t~g~imLggGNPa------~iPem~~~f~~~~aemla~~~~~e~~cn   69 (417)
T COG3977           1 MQFSLFGDKFTRH-SGITQLMDDLNDGLR----TPGAIMLGGGNPA------RIPEMDDYFQDLLAEMLASGKATEALCN   69 (417)
T ss_pred             CchhhhhHHhhhh-hhHHHHHHHHHhhcc----CCCceeeCCCCcc------cChhHHHHHHHHHHHHHhcchHHHHHhc
Confidence            6788888887754 489999999999986    5569999999864      234454444    3444333    4679


Q ss_pred             CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC---CC--CeEEEe-CCCCcchHHHHHhcCc
Q 019298           73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR---PG--ANILLP-RPGFPIYELSAAFRHI  146 (343)
Q Consensus        73 Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~---~g--d~vl~~-~p~~~~~~~~~~~~g~  146 (343)
                      |..++|...|.++++.++++++|+.+.+++|.+|+|++.+.+-++..+..   .|  ..|++| .|.|-+|.+....-..
T Consensus        70 Y~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~  149 (417)
T COG3977          70 YDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDL  149 (417)
T ss_pred             CCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccc
Confidence            99999999999999999999999999999999999999999999887753   23  355555 8999988765443222


Q ss_pred             eeEE---eecCCCC--CCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccC
Q 019298          147 EVRH---FDLLPDK--GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG  221 (343)
Q Consensus       147 ~~~~---~~~~~~~--~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~  221 (343)
                      -+..   +++.+..  .+.+|.+++.-  .+.+.+|+++.|.||||.+++.+++.+|..++++||+.+|+|.+|+.    
T Consensus       150 fVs~kP~iel~~~g~FKY~vDF~~l~i--~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~----  223 (417)
T COG3977         150 FVSAKPNIELLPAGQFKYHVDFEHLHI--GESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGV----  223 (417)
T ss_pred             eeeccCCcccccccceeeccCHHHccc--ccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCC----
Confidence            1111   1122222  25577777653  46788999999999999999999999999999999999999999986    


Q ss_pred             CCCCCccc--cc--CCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhc
Q 019298          222 DKPFVPMG--VF--GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYG  296 (343)
Q Consensus       222 ~~~~~~~~--~~--~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~  296 (343)
                        +++.+.  ..  .=.+|+|.|.|+||. |+||.|+|.+++        |+++++.+..+..+ +..+..+.++.+ ..
T Consensus       224 --PFP~iifsd~~~~w~~NiilC~SLSK~-GLPG~R~GIiIa--------ne~viqaitnmn~iisLap~~~G~Aia-~~  291 (417)
T COG3977         224 --PFPGIIFSDATPLWNENIILCMSLSKL-GLPGSRCGIIIA--------NEKVIQAITNMNGIISLAPGRMGPAIA-AE  291 (417)
T ss_pred             --CCCceecccccccCCCCEEEEeehhhc-CCCCcceeEEEc--------cHHHHHHHHhccceeeecCCCccHHHH-HH
Confidence              222111  11  113589999999999 999999999998        46899999888654 556666766666 22


Q ss_pred             cchhhHHHHH-----HHHHHHHHHHHHHHhhcC-CCC--ceeeCCCCceEeeecC
Q 019298          297 CLSTIMQIMI-----HGNFLENFAGSCVPSYKL-IPE--LINFKSTGSSLKYLDL  343 (343)
Q Consensus       297 ~l~~~~~~l~-----~~~~~~~~~~~~~~~L~~-~~g--~~~~~~~~g~~~~~~l  343 (343)
                      ++.. ..+++     .+..|+++.+...+.|++ +|.  +.+++|+|+.|+|+.|
T Consensus       292 mie~-gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWLWf  345 (417)
T COG3977         292 MIES-GDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLWLWF  345 (417)
T ss_pred             Hhhc-chHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccceeeecCCcceeehhhh
Confidence            2221 12222     555666666666666654 443  4588999999999975

>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]

Probab=100.00  E-value=3.4e-32  Score=237.89  Aligned_cols=261  Identities=18%  Similarity=0.271  Sum_probs=210.9

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHh-hhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCcee
Q 019298           70 FNGYAPTAGLPLTRRAIAEYLS-RDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEV  148 (343)
Q Consensus        70 ~~~Y~~~~g~~~lr~~ia~~~~-~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~  148 (343)
                      ..+|++..|.++|+..+.++.+ .........-.|++|+|.+.+++.+++.++++||.|++...+|..-....+..|+.+
T Consensus        93 alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~  172 (472)
T KOG0634|consen   93 ALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKI  172 (472)
T ss_pred             hhccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceE
Confidence            3489999999999999999664 222323344489999999999999999999999999999999999888889999999


Q ss_pred             EEeecCCCCCCCCCHHHHHhhhcC---C-----ceEEEEeCC--CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCcc
Q 019298          149 RHFDLLPDKGWEVDLDDIESLADQ---N-----TVALVIINP--GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHL  218 (343)
Q Consensus       149 ~~~~~~~~~~~~~d~~~l~~~~~~---~-----~~~i~~~~p--~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~  218 (343)
                      +.++++   ..++++|.|++.+..   .     .+-|+.+.|  +||||..++.+..++|.++|++||++||+||.|..+
T Consensus       173 ipv~md---~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~L  249 (472)
T KOG0634|consen  173 IPVKMD---QDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFL  249 (472)
T ss_pred             Eecccc---CCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCcccee
Confidence            988884   346899999987753   1     134555656  899999999999999999999999999999999999


Q ss_pred             ccCC--------CC-----------CCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh
Q 019298          219 VFGD--------KP-----------FVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF  279 (343)
Q Consensus       219 ~~~~--------~~-----------~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~  279 (343)
                      .++.        .+           .+++.+++.++|||...||||. ..||+|+||+.+++        .++++.-...
T Consensus       250 q~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKi-iaPGlRlG~it~~~--------~~l~ril~~a  320 (472)
T KOG0634|consen  250 QMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKI-IAPGLRLGWITGNS--------LFLKRILDLA  320 (472)
T ss_pred             eccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhh-hcCcceeEEeecCH--------HHHHHHhhhc
Confidence            8872        11           2234455677899999999999 58999999999853        5777666554


Q ss_pred             cc-ccCcchHHHHHHHhccchhh--H---HHHH-HHHHHHHHHHHHHHhhcC-CCCc--eeeCCCCceEeeecC
Q 019298          280 DI-LGDPATFIQVCIMYGCLSTI--M---QIMI-HGNFLENFAGSCVPSYKL-IPEL--INFKSTGSSLKYLDL  343 (343)
Q Consensus       280 ~~-~~~~~~~~~~a~~~~~l~~~--~---~~l~-~~~~~~~~~~~~~~~L~~-~~g~--~~~~~~~g~~~~~~l  343 (343)
                      .. +.+++.+.|..+ ++.|++-  .   +|+. .+..|.++|+.+..+|.+ +|+.  .++.|.+|+|+|+++
T Consensus       321 e~~t~~pSg~sq~iv-~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i  393 (472)
T KOG0634|consen  321 EVATSGPSGFSQGIV-YAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEI  393 (472)
T ss_pred             ceeecCcccccHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEe
Confidence            43 567899999998 7777652  2   2333 888899999999999987 6654  588999999999974

>cd00609 AAT_like Aspartate aminotransferase family

Probab=100.00  E-value=5.7e-31  Score=240.08  Aligned_cols=294  Identities=31%  Similarity=0.507  Sum_probs=233.3

Q ss_pred             eEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHH
Q 019298           38 ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAM  117 (343)
Q Consensus        38 i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~  117 (343)
                      +||+.|.+.    +..++.+.+++...........|++..|..++++.+++++...++.....+++++++|+++++..++
T Consensus         1 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~   76 (350)
T cd00609           1 IDLSIGEPD----FPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLL   76 (350)
T ss_pred             CCCCCCCCC----CCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHH
Confidence            578888843    5666777666654222334567888899999999999999987766666889999999999999999


Q ss_pred             HHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHH
Q 019298          118 ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQK  197 (343)
Q Consensus       118 ~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~  197 (343)
                      .++.++||+|+++.++|.++...++..|.+++.++.........+.+.++....++++++++++|+||||.+++.+++++
T Consensus        77 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~  156 (350)
T cd00609          77 RALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEE  156 (350)
T ss_pred             HHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHH
Confidence            99999999999999999999999999999999998865444333336666666778899999999999999999999999


Q ss_pred             HHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh
Q 019298          198 LAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK  277 (343)
Q Consensus       198 l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~  277 (343)
                      |+++|+++|+++|+|++|+.+.+.+............+.+++++|++|.++.+|.|+||+++++       +++.+.++.
T Consensus       157 l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~-------~~~~~~~~~  229 (350)
T cd00609         157 LAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPP-------EELLERLKK  229 (350)
T ss_pred             HHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCH-------HHHHHHHHH
Confidence            9999999999999999999887765443222233444578999999999988999999999853       257777776


Q ss_pred             hhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          278 YFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       278 ~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      .... .+.++...+.++ ..++....++++ .+++++++++.+.+.|.+++...+..+.+|+|+|+++
T Consensus       230 ~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~  296 (350)
T cd00609         230 LLPYTTSGPSTLSQAAA-AAALDDGEEHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDL  296 (350)
T ss_pred             HHHhcccCCChHHHHHH-HHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEec
Confidence            6443 457777878777 666665423443 7888999999999999987544435778899999864

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi

>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=3.5e-32  Score=234.38  Aligned_cols=269  Identities=24%  Similarity=0.380  Sum_probs=228.5

Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc-CCCCeEEEeCCCCcchHHHHHhcCc
Q 019298           68 EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RPGANILLPRPGFPIYELSAAFRHI  146 (343)
Q Consensus        68 ~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~~gd~vl~~~p~~~~~~~~~~~~g~  146 (343)
                      +.+..|..++|.+-+|+.+|+|+.++-|.+.+|++|++|+|++.++..++..++ .+.+.|++|-|.|+-|...+...|.
T Consensus       104 Gs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~l~~~  183 (475)
T KOG0258|consen  104 GSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATISLLGG  183 (475)
T ss_pred             CcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHHHHhCC
Confidence            367899999999999999999999999988999999999999999999998875 5779999999999999999999999


Q ss_pred             eeEEeecCCCCCCCCCHHHHHhhhcC-----CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccC
Q 019298          147 EVRHFDLLPDKGWEVDLDDIESLADQ-----NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG  221 (343)
Q Consensus       147 ~~~~~~~~~~~~~~~d~~~l~~~~~~-----~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~  221 (343)
                      ..+.+.++++.+|.+|.++|++.+.+     +++++++.||.||||++++.+.+++|+++|.+++++++-||+|+..+|.
T Consensus       184 ~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~  263 (475)
T KOG0258|consen  184 TQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYT  263 (475)
T ss_pred             cccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccC
Confidence            99999999999999999999987754     6789999999999999999999999999999999999999999999887


Q ss_pred             C-CCCCccccc--------CCCCCEEEEccCccccCC-CCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHH
Q 019298          222 D-KPFVPMGVF--------GSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQV  291 (343)
Q Consensus       222 ~-~~~~~~~~~--------~~~~~~i~~~S~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  291 (343)
                      + +.++++...        .+..-++.++|.||.+.. +|.|-||+-.-+     .+|+..+.+.++.....+++...|.
T Consensus       264 ~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n-----~~prv~~qi~Kl~si~lc~~V~GQ~  338 (475)
T KOG0258|consen  264 TGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLN-----RDPRVKQQIKKLASIKLCPQVSGQK  338 (475)
T ss_pred             CCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeeccc-----CChhHHHHHHHHHhhhhcCCccchh
Confidence            5 355554321        112246899999999877 999999987755     2467788887777666677777777


Q ss_pred             HHHhccchhh-------HHHHH----HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298          292 CIMYGCLSTI-------MQIMI----HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD  342 (343)
Q Consensus       292 a~~~~~l~~~-------~~~l~----~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~  342 (343)
                      .+ ...+.-+       ..+.+    ....++++...+.+.++.++|+.+..++|+||+|-+
T Consensus       339 ~v-dl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY~fP~  399 (475)
T KOG0258|consen  339 LV-DLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMYLFPQ  399 (475)
T ss_pred             hh-ceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCccceeeccc
Confidence            77 3333321       22222    778888999999999999999999999999999864

>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional

Probab=100.00  E-value=2.8e-31  Score=247.81  Aligned_cols=281  Identities=12%  Similarity=0.065  Sum_probs=207.5

Q ss_pred             ccceeEeccCCCCCCCCCCCcH---HHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTH---VATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  110 (343)
                      +.++++|++|+|.  ..+.+++   .+.+++.+++..+. ..|++..|.++||++++++++        .+++++|+|++
T Consensus        35 g~~~~~L~~g~p~--~D~~tds~t~a~~~a~~~a~~~g~-~~Y~~~~g~~~Lreaia~~~~--------~~~vv~t~ggt  103 (460)
T PRK13238         35 GYNPFLLKSEDVF--IDLLTDSGTGAMSDRQWAAMMRGD-EAYAGSRSYYRLEDAVKDIFG--------YPYTIPTHQGR  103 (460)
T ss_pred             CCCEEeCCCCCCC--CCCCCCCCchhhhHHHHHHHHhCC-cccCCCCCHHHHHHHHHHHhC--------CCcEEECCCHH
Confidence            7899999999984  1244433   67888777776543 479999999999999999993        46899999999


Q ss_pred             HHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCC------CCCC--CCHHHHHhhhcC----CceEEE
Q 019298          111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD------KGWE--VDLDDIESLADQ----NTVALV  178 (343)
Q Consensus       111 ~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~------~~~~--~d~~~l~~~~~~----~~~~i~  178 (343)
                      +++..++.+++++|| |+++.|.|..|...+...|.+++.+++++.      +.|.  +|+++|++.+++    ++++|+
T Consensus       104 ~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Iv  182 (460)
T PRK13238        104 AAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIV  182 (460)
T ss_pred             HHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCceeEEE
Confidence            999999999999999 999999999999989999999999988642      3444  999999999874    688999


Q ss_pred             EeCCCCCcc-cccCHHHHHHHHHHHhhcCcEEEEccCCCc--cccCC-----CCCCcccccCCCCCEEEEccCccccCCC
Q 019298          179 IINPGNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGH--LVFGD-----KPFVPMGVFGSTVPILTLGSLSKRWIVP  250 (343)
Q Consensus       179 ~~~p~nptG-~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~--~~~~~-----~~~~~~~~~~~~~~~i~~~S~sK~~~~~  250 (343)
                      +++|+|||| .+++.+++++|.++|++||+++|+|+++..  .+|..     ....++..+     +..++|++|.+.++
T Consensus       183 l~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i-----~~~~~s~~D~~~~S  257 (460)
T PRK13238        183 MTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEI-----AREMFSYADGLTMS  257 (460)
T ss_pred             EecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHH-----hhhhcccCcEEEEe
Confidence            999999997 999999999999999999999999997632  33321     111121111     12334555555555


Q ss_pred             CCcE------EEEEEeCCCCCCCchHHHHHHhhhh----c-cccC-cchHHHHHHHhccchh--hHHHHHHHHHHHHHHH
Q 019298          251 GWRL------GWFVTTDPCGMFRKPKVVERMKKYF----D-ILGD-PATFIQVCIMYGCLST--IMQIMIHGNFLENFAG  316 (343)
Q Consensus       251 G~r~------G~i~~~~~~~~~~~~~~~~~l~~~~----~-~~~~-~~~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~  316 (343)
                      |+|+      |++++++       +++.++++...    . ..++ .+...|.|+ ...|.+  ...++   +...++++
T Consensus       258 g~K~g~~~~GG~i~~~d-------~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Al-a~~l~e~~~~~~~---~~~~~~~~  326 (460)
T PRK13238        258 AKKDAMVNIGGLLCFRD-------EDLFTECRTLCILYEGFPTYGGLAGRDMEAL-AVGLYEGMDEDYL---AYRIGQVE  326 (460)
T ss_pred             cccCCCCcceeEEEcCh-------HHHHHHhhhcccccCCcccccCcHHHHHHHH-HhhHHHhhChHHH---HHHHHHHH
Confidence            5554      3455432       46888887663    1 1233 344446666 333332  12222   22334678


Q ss_pred             HHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          317 SCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       317 ~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      .+.+.|++. |+++..|+||+|+|+++
T Consensus       327 ~l~~~L~~~-G~~~~~p~Gg~~v~~d~  352 (460)
T PRK13238        327 YLGEGLEEA-GVPIQTPAGGHAVFVDA  352 (460)
T ss_pred             HHHHHHHHC-CCCeEccCCceEEEEEc
Confidence            899999887 99988999999999874

>cd00617 Tnase_like Tryptophanase family (Tnase)

Probab=99.97  E-value=2e-29  Score=232.30  Aligned_cols=286  Identities=13%  Similarity=0.082  Sum_probs=207.4

Q ss_pred             ccccceeEeccCCC--CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298           32 KNEKKVISLAMGDP--TVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (343)
Q Consensus        32 ~~~~~~i~l~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~  109 (343)
                      ..+-++++|..+++  +..+..++ ..+.+++..++..+.. .|.+..|.++|+++++++++        .+++++|+|+
T Consensus         8 ~~g~n~~~l~~~~v~iDlltds~t-~ams~~~~~a~~~gd~-~Y~~~~g~~~Leeaia~~~g--------~~~vv~t~~G   77 (431)
T cd00617           8 EAGYNVFLLRSEDVYIDLLTDSGT-GAMSDYQWAAMMLGDE-AYAGSKSFYDLEDAVQDLFG--------FKHIIPTHQG   77 (431)
T ss_pred             HcCCCEEeCCCCCcCCCCCCCCCc-HHHHHHHHHHHHhCCC-ccCCCCCHHHHHHHHHHHHC--------CCeEEEcCCH
Confidence            34889999999998  53333322 3555555555554443 59999999999999999993        4689999999


Q ss_pred             HHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCC--------CCCCHHHHHhhhcCC----ceEE
Q 019298          110 TQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG--------WEVDLDDIESLADQN----TVAL  177 (343)
Q Consensus       110 ~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~--------~~~d~~~l~~~~~~~----~~~i  177 (343)
                      ++++..++.++++|||.| ++.|+|..+...+...|...+.+++++..+        +.+|+++|++.++++    +++|
T Consensus        78 t~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I  156 (431)
T cd00617          78 RGAENILFSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYI  156 (431)
T ss_pred             HHHHHHHHHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEE
Confidence            999999999999999988 689999999999999999999999875432        449999999999764    6789


Q ss_pred             EEeCCCCCc-ccccCHHHHHHHHHHHhhcCcEEEEccCCCc--ccc-----CCCCCCcccccCCCCCEEEEccCccccCC
Q 019298          178 VIINPGNPC-GNVYSYQHLQKLAETANKLKTLVIADEVYGH--LVF-----GDKPFVPMGVFGSTVPILTLGSLSKRWIV  249 (343)
Q Consensus       178 ~~~~p~npt-G~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~--~~~-----~~~~~~~~~~~~~~~~~i~~~S~sK~~~~  249 (343)
                      ++++|+||+ |++++.++++++.++|++||+++|+|++...  ..+     ++....++..     .++.++|++|.+.+
T Consensus       157 ~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~e-----i~~e~~s~sd~~~m  231 (431)
T cd00617         157 VLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAE-----IAREMFSYADGCTM  231 (431)
T ss_pred             EEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHH-----HHHHhhccCCEEEE
Confidence            999999998 9999999999999999999999999999542  122     1111122211     23456677777777


Q ss_pred             CCCc------EEEEEEeCCCCCCCchHHHHHHhhhh----c-c-ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHH
Q 019298          250 PGWR------LGWFVTTDPCGMFRKPKVVERMKKYF----D-I-LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGS  317 (343)
Q Consensus       250 ~G~r------~G~i~~~~~~~~~~~~~~~~~l~~~~----~-~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~  317 (343)
                      +|+|      .||+++++       ++++++++...    . . ++..+.....++ ...|.+..+ .+..+...++++.
T Consensus       232 S~~K~~~~~~GG~i~~~d-------~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~-A~gL~e~~~-~~~l~~~~~~r~~  302 (431)
T cd00617         232 SAKKDGLVNIGGFLALRD-------DELYEEARQRVVLYEGFVTYGGMAGRDMEAL-AQGLREAVE-EDYLRHRVEQVRY  302 (431)
T ss_pred             EeecCCCCccceEEEeCc-------HHHHHHHHHhccccCCccccccccHHHHHHH-HHHHHhccc-HHHHHHHHHHHHH
Confidence            7776      56888754       35888877432    1 1 112222222333 334433211 2322333335588


Q ss_pred             HHHhhcCCCCceeeCCCCceEeeecC
Q 019298          318 CVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       318 ~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +.+.|++. |+++..|+||+|+|++.
T Consensus       303 l~~~L~~~-G~~v~~P~Ggh~v~~d~  327 (431)
T cd00617         303 LGDRLDEA-GVPIVEPAGGHAVFIDA  327 (431)
T ss_pred             HHHHHHHC-CCCccCCCcceEEEEEh
Confidence            88999998 89988999999999973

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.

>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]

Probab=99.96  E-value=1e-28  Score=202.57  Aligned_cols=240  Identities=20%  Similarity=0.283  Sum_probs=195.9

Q ss_pred             HHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCC-CeEEEeCCCCcchHHHHHhcCceeEEeecCCCCC
Q 019298           80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG  158 (343)
Q Consensus        80 ~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  158 (343)
                      ..++.++++-      .+..+|+|++..|+.+.|..+++..+.|| ++|+...|+|..|...+...+.+++.+++.+  +
T Consensus        72 k~ls~a~~~d------kpLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~p--d  143 (375)
T KOG0633|consen   72 KRLSDALAQD------KPLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNP--D  143 (375)
T ss_pred             chhhhhcccC------CCCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCC--C
Confidence            4455554433      37899999999999999999999999999 8999999999999999999999999999886  6


Q ss_pred             CCCCHHHHHhhhcC--CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCC
Q 019298          159 WEVDLDDIESLADQ--NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP  236 (343)
Q Consensus       159 ~~~d~~~l~~~~~~--~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~  236 (343)
                      |.+|.|++.+.+..  .++.+++++|+||||..+..+++.++.+.-.  |.++++||+|.+|.-.++   .+.-....+|
T Consensus       144 F~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~--nglVVvDEAYidFsg~~S---~~~lV~kYpN  218 (375)
T KOG0633|consen  144 FSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPD--NGLVVVDEAYIDFSGVES---RMKLVKKYPN  218 (375)
T ss_pred             ccccHHHHHHHHhccccceEEEEcCCCCCCcccccHHHHHHHHhCCC--CcEEEEeeeeEeeccccc---cchHhHhCCc
Confidence            88999999998764  6789999999999999999999999998665  799999999999864333   2333456678


Q ss_pred             EEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccch--hhHHHHHHHHHHHHH
Q 019298          237 ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLS--TIMQIMIHGNFLENF  314 (343)
Q Consensus       237 ~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~--~~~~~l~~~~~~~~~  314 (343)
                      ++++.+|||+||++|+|+||...+-        ++++.+-.... .++.+.....++ .++|+  +...+...+..+.+.
T Consensus       219 LivlqTlSKsfGLAGiRvG~~~~~~--------~ia~iln~~Ka-PYNiS~~~s~~A-L~Als~~n~kkme~~rdaiv~e  288 (375)
T KOG0633|consen  219 LIVLQTLSKSFGLAGIRVGYGAFPL--------SIAEILNRAKA-PYNISVAGSVAA-LAALSDSNGKKMEDVRDAIVRE  288 (375)
T ss_pred             eeehhhhhhhcCcceeEeecccccH--------HHHHHHHhccC-CccccchhHHHH-HHhcCcccchHHHHHHHHHHHH
Confidence            9999999999999999999988753        56666665554 344555555555 46666  334444489999999


Q ss_pred             HHHHHHhhcCCCCce-eeCCCCceEeeec
Q 019298          315 AGSCVPSYKLIPELI-NFKSTGSSLKYLD  342 (343)
Q Consensus       315 ~~~~~~~L~~~~g~~-~~~~~~g~~~~~~  342 (343)
                      |.++.+.|..+|++. +..+..++|+.++
T Consensus       289 r~RL~keLt~v~~~~~~~gg~daNFiLi~  317 (375)
T KOG0633|consen  289 RERLFKELTEVPFLNDYPGGSDANFILIE  317 (375)
T ss_pred             HHHHHHHhhcCccccCCCCcccccEEEEE
Confidence            999999999998877 6688889998875

>PLN02822 serine palmitoyltransferase

Probab=99.96  E-value=1e-27  Score=225.72  Aligned_cols=285  Identities=14%  Similarity=0.102  Sum_probs=207.0

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc-CC-----CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS-EK-----FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT  106 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~  106 (343)
                      ++++++||+.+++   .++..+|.+++++.+++++ +.     -..|++..+..+|++++++++.       .++.|+++
T Consensus       107 ~G~~~id~~s~~~---lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~-------~~~~i~~s  176 (481)
T PLN02822        107 NGKDVVNFASANY---LGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLG-------TPDSILYS  176 (481)
T ss_pred             CCceEEEeECCCc---CCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhC-------CCCEEEEC
Confidence            3678999999873   3466799999999999976 21     1146666678999999999994       35788888


Q ss_pred             cChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc--CCc-eEEEEeCCC
Q 019298          107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD--QNT-VALVIINPG  183 (343)
Q Consensus       107 ~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--~~~-~~i~~~~p~  183 (343)
                      +|.+ ++..++.+++++||.|++....|..+...+...+.+++.++.++.+++..+++++++...  +++ ++|++..++
T Consensus       177 ~G~~-a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~  255 (481)
T PLN02822        177 YGLS-TIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIY  255 (481)
T ss_pred             CHHH-HHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCC
Confidence            8877 578889999999999999988888887788888888888875432222222333322211  223 577777889


Q ss_pred             CCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC--CCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298          184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK--PFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (343)
Q Consensus       184 nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~--~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~  261 (343)
                      |++|.+.+   +++|+++|++||+++|+||+|+..+++..  ..............|+++||||+|++.|   ||++++ 
T Consensus       256 ~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g~-  328 (481)
T PLN02822        256 QNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFCTGS-  328 (481)
T ss_pred             CCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEcC-
Confidence            99999977   78889999999999999999997777632  2111111112245699999999999888   999985 


Q ss_pred             CCCCCCchHHHHHHhhhh-cccc--CcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceE
Q 019298          262 PCGMFRKPKVVERMKKYF-DILG--DPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSL  338 (343)
Q Consensus       262 ~~~~~~~~~~~~~l~~~~-~~~~--~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~  338 (343)
                             +++++.++... ...+  +.++..+.++ .++|+....+-+.+++++++++.+.+.|++++|+.+..+.++++
T Consensus       329 -------~~ii~~~~~~~~~~~fsa~lPp~~~~Aa-~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi  400 (481)
T PLN02822        329 -------ARVVDHQRLSSSGYVFSASLPPYLASAA-ITAIDVLEDNPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPI  400 (481)
T ss_pred             -------HHHHHHHHhcCCceeeccccCHHHHHHH-HHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCE
Confidence                   36788776543 2222  3456666666 45555433334488899999999999999877888767788999


Q ss_pred             eeecC
Q 019298          339 KYLDL  343 (343)
Q Consensus       339 ~~~~l  343 (343)
                      +|+.+
T Consensus       401 ~~l~l  405 (481)
T PLN02822        401 VFLHL  405 (481)
T ss_pred             EEEEe
Confidence            88753

>TIGR00858 bioF 8-amino-7-oxononanoate synthase

Probab=99.96  E-value=1.5e-26  Score=211.95  Aligned_cols=275  Identities=12%  Similarity=0.110  Sum_probs=194.7

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCC----CHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--FNGYAPTAG----LPLTRRAIAEYLSRDLPYKLTPNDVFVT  106 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~g----~~~lr~~ia~~~~~~~~~~~~~~~i~~~  106 (343)
                      ++.+++||+.|+|   .+++.++.+.+++++++....  ...|....|    ..+++++++++++       .+++++++
T Consensus        14 ~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~-------~~~~i~~~   83 (360)
T TIGR00858        14 DGRRLLNFSSNDY---LGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKG-------TEAALLFS   83 (360)
T ss_pred             CCceEEecccCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC-------CCCEEEEC
Confidence            4788999999953   234567899999999886411  112222223    3457788877773       35677888


Q ss_pred             cChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC----CceEEEEeCC
Q 019298          107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----NTVALVIINP  182 (343)
Q Consensus       107 ~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~i~~~~p  182 (343)
                      +|+.+ +..+++.++++||+|+++.|+|..+...++..|.+++.++.       +|++.+++.++.    ++++++++++
T Consensus        84 ~G~~~-~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~v~~~~~  155 (360)
T TIGR00858        84 SGYLA-NVGVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNRGERRKLIVTDGV  155 (360)
T ss_pred             chHHH-HHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcccCCCeEEEEeCC
Confidence            77555 44567788899999999999999999999999988877652       578889888764    3577778888


Q ss_pred             CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC--CcccccCCCCCEEEEccCccccCCCCCcEEEEEEe
Q 019298          183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF--VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT  260 (343)
Q Consensus       183 ~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~--~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~  260 (343)
                      +||||..   .++++|.++|+++|+++|+||+|..+.++....  .....+...+++|+++|+||+|+++|   ||++++
T Consensus       156 ~~~~G~~---~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~~  229 (360)
T TIGR00858       156 FSMDGDI---APLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAGS  229 (360)
T ss_pred             ccCCCCC---cCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEcC
Confidence            9999988   457888889999999999999998765543211  12222333467899999999998877   999874


Q ss_pred             CCCCCCCchHHHHHHhhhhcc---ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCce
Q 019298          261 DPCGMFRKPKVVERMKKYFDI---LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSS  337 (343)
Q Consensus       261 ~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~  337 (343)
                              +++++.++.....   ....++..+.++ .++++.....-+.+++++++++.+.+.|+++ ++.+ .+.+++
T Consensus       230 --------~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~-~~~~~~  298 (360)
T TIGR00858       230 --------QALIDYLINRARTLIFSTALPPAVAAAA-LAALELIQEEPWRREKLLALIARLRAGLEAL-GFTL-MPSCTP  298 (360)
T ss_pred             --------HHHHHHHHHhCccceecCCCCHHHHHHH-HHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc-CCcc-CCCCCC
Confidence                    3577777544221   223444444444 4444432222237889999999999999987 6776 356778


Q ss_pred             Eeeec
Q 019298          338 LKYLD  342 (343)
Q Consensus       338 ~~~~~  342 (343)
                      ++|+.
T Consensus       299 ~~~~~  303 (360)
T TIGR00858       299 IVPVI  303 (360)
T ss_pred             EEEEE
Confidence            88875

This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.

>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]

Probab=99.95  E-value=1.1e-27  Score=203.66  Aligned_cols=327  Identities=16%  Similarity=0.131  Sum_probs=247.2

Q ss_pred             ccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHH
Q 019298            6 GGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRR   84 (343)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~   84 (343)
                      .....||+  +|..+...+..+.     .+.+|||++|..+..++-| ..+.+++|-++........+|.|..|.+++.+
T Consensus        30 ~V~maPpD--pILGVTeAfk~D~-----n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k  102 (427)
T KOG1411|consen   30 HVEMAPPD--PILGVTEAFKKDP-----NPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNK  102 (427)
T ss_pred             cCCCCCCC--CcccHHHHHhcCC-----CcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHH
Confidence            34567777  8999999999887     7899999999977655544 77888888777666556679999999999999


Q ss_pred             HHHHHHhhhCCCCCCCCcEE--EecChHHHHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298           85 AIAEYLSRDLPYKLTPNDVF--VTSGCTQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (343)
Q Consensus        85 ~ia~~~~~~~~~~~~~~~i~--~~~g~~~al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (343)
                      ..+++.-..-...+..++|+  -+-+++.++......|.  -++..|.+++|+|.+.....+..|+.+..+........+
T Consensus       103 ~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~g  182 (427)
T KOG1411|consen  103 LSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRG  182 (427)
T ss_pred             HHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccccc
Confidence            99999943222224555664  45678889988877764  368899999999999999999999999988877767778


Q ss_pred             CCHHHHHhhhcCCc-eEEE-EeCC-CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC--CCCcccccC-CC
Q 019298          161 VDLDDIESLADQNT-VALV-IINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK--PFVPMGVFG-ST  234 (343)
Q Consensus       161 ~d~~~l~~~~~~~~-~~i~-~~~p-~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~--~~~~~~~~~-~~  234 (343)
                      +|++.+.+-+.+.+ ..++ +..+ |||||+..+.|+|++|.++.++.+.+.+.|.+|++|..++-  +..+++.+. +.
T Consensus       183 ld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g  262 (427)
T KOG1411|consen  183 LDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDG  262 (427)
T ss_pred             cchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcC
Confidence            99888777665522 2333 3333 99999999999999999999999999999999999987753  333344443 34


Q ss_pred             CCEEEEccCccccCCCCCcEEE--EEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhh---HHHHH--
Q 019298          235 VPILTLGSLSKRWIVPGWRLGW--FVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTI---MQIMI--  306 (343)
Q Consensus       235 ~~~i~~~S~sK~~~~~G~r~G~--i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~---~~~l~--  306 (343)
                      .+++++.|+.|.+|+.|.|+|.  ++|.+.+..   ..+..+++.+ +..++++|......+ ..+|+++   .+|+.  
T Consensus       263 ~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A---~rV~SQlk~liRpmYSnPP~hGArIv-~~Il~d~~l~~~W~~ev  338 (427)
T KOG1411|consen  263 HEILLAQSYAKNMGLYGERVGALSVVCKDADEA---KRVESQLKILIRPMYSNPPLHGARIV-ATILSDPDLKNQWLGEV  338 (427)
T ss_pred             CceEeehhhhhhcchhhhccceeEEEecCHHHH---HHHHHHHHHHhcccccCCCccchhhh-hhccCChHHHHHHHHHH
Confidence            4799999999999999999998  566543210   1233455544 344667777777666 7888875   45554  


Q ss_pred             --HHHHHHHHHHHHHHhhcCC--C-CceeeCCCCceEeeecC
Q 019298          307 --HGNFLENFAGSCVPSYKLI--P-ELINFKSTGSSLKYLDL  343 (343)
Q Consensus       307 --~~~~~~~~~~~~~~~L~~~--~-g~~~~~~~~g~~~~~~l  343 (343)
                        +..++...|..+.+.|...  + .|.....+-|+|.|-.|
T Consensus       339 k~MadRi~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~fTgl  380 (427)
T KOG1411|consen  339 KGMADRIISMRQQLFDALEKEGSPGNWSHITKQIGMFCFTGL  380 (427)
T ss_pred             HHHHHhhhhhHHHHhHHhhcCCCCccHHHHHHhhheeeecCC
Confidence              7888888888888888763  2 35555788899988653

>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase

Probab=99.95  E-value=3.1e-26  Score=212.46  Aligned_cols=270  Identities=14%  Similarity=0.095  Sum_probs=193.5

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC---CC----HHHHHHHHHHHhhhCCCCCCCCcEEE
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTA---GL----PLTRRAIAEYLSRDLPYKLTPNDVFV  105 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~---g~----~~lr~~ia~~~~~~~~~~~~~~~i~~  105 (343)
                      ++.++|||+.+++   .+++.+|++++++.+++.... .+|+++.   |.    .++++++|++++        .+++++
T Consensus        36 ~g~~~i~~~~~~~---lg~~~~~~v~~~~~~~~~~~~-~~~~~s~~~~G~~~~~~~le~~ia~~~g--------~~~~ii  103 (393)
T TIGR01822        36 DGREVLNFCANNY---LGLSSHPDLIQAAKDALDEHG-FGMSSVRFICGTQDIHKELEAKIAAFLG--------TEDTIL  103 (393)
T ss_pred             CCceEEEeeCCCc---cccCCCHHHHHHHHHHHHHhC-CCCCCcCcccCChHHHHHHHHHHHHHhC--------CCcEEE
Confidence            3678999999983   457889999999999887522 2566655   75    789999999983        357888


Q ss_pred             ecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEE
Q 019298          106 TSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVI  179 (343)
Q Consensus       106 ~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~  179 (343)
                      ++|+++++..++.+++++||.|+++.|+|+.+...++..+.+...+.       ..|++++++.+++      ++++|++
T Consensus       104 ~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~~v~~  176 (393)
T TIGR01822       104 YASCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEARAAGARHRLIAT  176 (393)
T ss_pred             ECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhhhcCCCceEEEE
Confidence            88999999999999999999999999999999888877776654432       2688999888764      5677788


Q ss_pred             eCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEE
Q 019298          180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFV  258 (343)
Q Consensus       180 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~  258 (343)
                      .+++||||.+.   ++++|+++|++||+++|+|++|.....+..........+. .+.+++++|+||.+  +|+|+||++
T Consensus       177 ~~v~~~tG~~~---~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l--~g~r~G~~~  251 (393)
T TIGR01822       177 DGVFSMDGVIA---PLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKAL--GGASGGFTT  251 (393)
T ss_pred             eCCccCCCCcC---CHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHh--hCCCcEEEE
Confidence            88899999995   4788899999999999999999643332211111111111 13569999999995  468999998


Q ss_pred             EeCCCCCCCchHHHHHHhhhh-cc-cc-CcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCC
Q 019298          259 TTDPCGMFRKPKVVERMKKYF-DI-LG-DPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTG  335 (343)
Q Consensus       259 ~~~~~~~~~~~~~~~~l~~~~-~~-~~-~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~  335 (343)
                      ++        +++++.++... .. .. ..++..+.++ ..++......-+.+++++++++.+.+.|+++ |+.+..+.+
T Consensus       252 ~~--------~~~~~~l~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~  321 (393)
T TIGR01822       252 AR--------KEVVELLRQRSRPYLFSNSLPPAVVGAS-IKVLEMLEASNELRDRLWANTRYFRERMEAA-GFDIKPADH  321 (393)
T ss_pred             eC--------HHHHHHHHHhCccceecCCCCHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCC
Confidence            85        36777776542 21 22 2334433443 3444322222237788999999999999876 777644444


Q ss_pred             c
Q 019298          336 S  336 (343)
Q Consensus       336 g  336 (343)
                      .
T Consensus       322 ~  322 (393)
T TIGR01822       322 P  322 (393)
T ss_pred             C
Confidence            4

This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.

>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional

Probab=99.95  E-value=3.7e-26  Score=212.24  Aligned_cols=278  Identities=14%  Similarity=0.078  Sum_probs=196.0

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  110 (343)
                      +++++|||+.|++   ++++.++.+.+++++++.....  ..|....|.+++++++++++.+.+|.   +++|++|+| +
T Consensus        40 ~g~~~i~l~~~~~---~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~i~~tsG-~  112 (397)
T PRK06939         40 DGKEVINFCANNY---LGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGT---EDAILYSSC-F  112 (397)
T ss_pred             CCCeEEEeeccCc---cccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCC---CcEEEEcCh-H
Confidence            4778999999873   3477889999999998865321  12233468888999999988887663   367888887 7


Q ss_pred             HHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCC
Q 019298          111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGN  184 (343)
Q Consensus       111 ~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~n  184 (343)
                      +++..++++++++||.|++++|+|+.+...+...|.+++.++.       .|++.+++.+++      ++++++..+.+|
T Consensus       113 ~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~  185 (397)
T PRK06939        113 DANGGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFS  185 (397)
T ss_pred             HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcC
Confidence            7888899999999999999999999998888888888776643       478888877753      455666556789


Q ss_pred             CcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEeCCC
Q 019298          185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPC  263 (343)
Q Consensus       185 ptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~  263 (343)
                      ++|..   +++++|.++|++||+++|+||+|....++..........+. .+.+++++|+||+++  |.|+||++++   
T Consensus       186 ~~G~~---~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~--g~r~G~v~~~---  257 (397)
T PRK06939        186 MDGDI---APLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALG--GASGGYTAGR---  257 (397)
T ss_pred             CCCCc---CCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhC--ccCceEEEeC---
Confidence            99987   67889999999999999999999642222111111111111 134699999999973  5689999985   


Q ss_pred             CCCCchHHHHHHhhhhc-c--ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEe
Q 019298          264 GMFRKPKVVERMKKYFD-I--LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLK  339 (343)
Q Consensus       264 ~~~~~~~~~~~l~~~~~-~--~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~  339 (343)
                           +++++.++.... .  ....++..+.++ .++++.....-+.+++++++++.+.+.|+.+ |+.+..+.++++.
T Consensus       258 -----~~~~~~l~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~  329 (397)
T PRK06939        258 -----KEVIDWLRQRSRPYLFSNSLAPAIVAAS-IKVLELLEESDELRDRLWENARYFREGMTAA-GFTLGPGEHPIIP  329 (397)
T ss_pred             -----HHHHHHHHHhCccccccCCCCHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCEEE
Confidence                 367787765432 1  122233333433 3333322222247888999999999999887 6776556666653

>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family

Probab=99.95  E-value=5.9e-26  Score=205.40  Aligned_cols=255  Identities=16%  Similarity=0.122  Sum_probs=184.3

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeE
Q 019298           48 HSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANI  127 (343)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~v  127 (343)
                      |.++..+|.++++..++++.-  .  +...-+.+|++.+|+|+      +++++++++++|+++++..++.+++++||+|
T Consensus        29 ylgl~~~~~~~~~~~~~~~~~--~--g~~~~~~~Le~~lA~~~------g~~~e~ilv~~gg~~a~~~~~~al~~~gd~V   98 (346)
T TIGR03576        29 LTGLAGGFKIDEEDLELLETY--V--GPAIFEEKVQELGREHL------GGPEEKILVFNRTSSAILATILALEPPGRKV   98 (346)
T ss_pred             cccCCCChhHHHHHHHHHHHh--c--CCHHHHHHHHHHHHHHc------CCCcceEEEECCHHHHHHHHHHHhCCCCCEE
Confidence            455778899999988887641  1  12233456666666666      4578999999999999999999999999999


Q ss_pred             EEe---CCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298          128 LLP---RPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (343)
Q Consensus       128 l~~---~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~  204 (343)
                      +++   .|+|..|...++..|.++..+         .++++++.  .+++++|++ +++||+|.+++.+++++|+++|++
T Consensus        99 li~~~d~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~--~~~~~lIii-tg~s~~G~v~~~~~L~~i~~la~~  166 (346)
T TIGR03576        99 VHYLPEKPAHPSIPRSCKLAGAEYFES---------DELSELKK--IDGTSLVVI-TGSTMDLKVVSEEDLKRVIKQAKS  166 (346)
T ss_pred             EECCCCCCCchhHHHHHHHcCCEEecc---------CCHHHHhh--CcCceEEEE-ECCCCCCcccCHHHHHHHHHHHHH
Confidence            975   579999999999999876332         14555433  235666666 567999999999999999999999


Q ss_pred             cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-cc
Q 019298          205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LG  283 (343)
Q Consensus       205 ~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~  283 (343)
                      +|+++|+||+|+.++.+.....+.....   ..++++||||  +++|+|+||++++        +++++.+++.... ..
T Consensus       167 ~~~~livDEAy~~~~~~~~~~~~~~~~~---~divv~s~SK--alaG~r~G~v~~~--------~~li~~l~~~~~~~~~  233 (346)
T TIGR03576       167 KEAIVLVDDASGARVRRLYGQPPALDLG---ADLVVTSTDK--LMDGPRGGLLAGR--------KELVDKIKSVGEQFGL  233 (346)
T ss_pred             cCCEEEEECCccccccccCCCCCHHHcC---CcEEEeccch--hccccceEEEEeC--------HHHHHHHHHhhcCccc
Confidence            9999999999998754311111111121   2377889999  4789999999985        4788989887542 33


Q ss_pred             CcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          284 DPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       284 ~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +.+++.|.++ .++|+... .-..++.++++++.+.+.++.   +.+ .++.++|+|+++
T Consensus       234 s~~~~~~~aa-~~aL~~~~-~~~~~~~l~~r~~~~~~~l~~---~~~-~~~~~~f~~~~~  287 (346)
T TIGR03576       234 EAQAPLLAAV-VRALEEFE-LSRIRDAFKRKEEVYLRLFDK---LNV-ERTPTGFVIKGV  287 (346)
T ss_pred             CccHHHHHHH-HHHHhhcc-HHHHHHHHHHHHHHHHHHHHh---CCC-CcCCCeEEEEeC
Confidence            4677778777 66665422 223677888888888877774   344 344555899864

Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.

>PRK07049 methionine gamma-lyase; Validated

Probab=99.95  E-value=5.9e-26  Score=210.76  Aligned_cols=229  Identities=14%  Similarity=0.137  Sum_probs=177.8

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH----HhcC
Q 019298           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRH  145 (343)
Q Consensus        70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~g  145 (343)
                      +++|+.+ ....|++.+|++.        ..+++++++|+++++..++.+++++||.|+++.|+|+.+...+    ...|
T Consensus        77 y~R~~~P-t~~~Le~~lA~le--------g~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~G  147 (427)
T PRK07049         77 YSRFNHP-NSEIVEDRLAVYE--------GAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFG  147 (427)
T ss_pred             ccCCCCc-CHHHHHHHHHHHh--------CCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcC
Confidence            4567753 5689999999998        3567889999999999999999999999999999999987664    4568


Q ss_pred             ceeEEeecCCCCCCCCCHHHHHhhhc-----CCceEEEEeCCCCCcccccCHHHHHHHHHHHhh---cCcEEEEccCCCc
Q 019298          146 IEVRHFDLLPDKGWEVDLDDIESLAD-----QNTVALVIINPGNPCGNVYSYQHLQKLAETANK---LKTLVIADEVYGH  217 (343)
Q Consensus       146 ~~~~~~~~~~~~~~~~d~~~l~~~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~---~~~~~i~D~ay~~  217 (343)
                      .+++.++.      ..|.+.+++.+.     +++++|++++|+||||.+++.+++.++++.|+.   +++++|+|++|..
T Consensus       148 i~~v~~~~------~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~  221 (427)
T PRK07049        148 VGAVGFAD------GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLG  221 (427)
T ss_pred             cEEEEEeC------CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccc
Confidence            77666641      146677776653     468999999999999999999999999998754   6899999999876


Q ss_pred             cccCCCCCCcccccCCCCCEEEEccCccccC-CCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHh
Q 019298          218 LVFGDKPFVPMGVFGSTVPILTLGSLSKRWI-VPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMY  295 (343)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~  295 (343)
                      .....    ++    ..+..++++|+||.|+ .+|+|+||++++        ++++++++..... ....+++.+.++ .
T Consensus       222 ~~~~~----pl----~~g~divv~S~SK~~gG~~glr~G~vv~~--------~~l~~~l~~~~~~~g~~ls~~~a~l~-~  284 (427)
T PRK07049        222 PVFQK----PL----EHGADLSVYSLTKYVGGHSDLVAGAVLGR--------KALIRQVRALRSAIGTQLDPHSCWML-G  284 (427)
T ss_pred             cccCC----cc----ccCCCEEEEcCceeecCCCCcEEEEEECC--------HHHHHHHHHHHHhcCCCCCHHHHHHH-H
Confidence            43211    11    1234599999999999 499999999874        3688888776543 446788888877 4


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          296 GCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       296 ~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      ..|.   .+..+.++..++++.+.+.|+++|++. ++.|
T Consensus       285 r~L~---tl~~R~~~~~~~a~~la~~L~~~p~V~~v~yp  320 (427)
T PRK07049        285 RSLE---TLVLRMERANRNARAVAEFLRDHPKVEKLHYL  320 (427)
T ss_pred             cCCC---hHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence            4443   334466777999999999999998877 5555

>PRK10534 L-threonine aldolase; Provisional

Probab=99.95  E-value=1.5e-26  Score=209.75  Aligned_cols=268  Identities=15%  Similarity=0.105  Sum_probs=184.2

Q ss_pred             eEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHH
Q 019298           38 ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAM  117 (343)
Q Consensus        38 i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~  117 (343)
                      |||+...    +.. ++|.+++++.+....  ...|.|..+..+|+++++++++        .+.+++++|+++++..++
T Consensus         2 ~~~~~~~----~~~-p~~~~~~a~~~~~~~--~~~Y~~~~~~~~L~~~la~~~g--------~~~~~v~~~g~~a~~~~l   66 (333)
T PRK10534          2 IDLRSDT----VTR-PSRAMLEAMMAAPVG--DDVYGDDPTVNALQDYAAELSG--------KEAALFLPTGTQANLVAL   66 (333)
T ss_pred             ccccccc----CCC-CCHHHHHHHHhccCC--CcccCCCHHHHHHHHHHHHHhC--------CCeEEEeCchHHHHHHHH
Confidence            6777776    223 788999998775433  3578766788999999999982        345578888888888888


Q ss_pred             HHhcCCCCeEEEeCCCCcc-hHHH-HHhcC-ceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCCCccc
Q 019298          118 ALLSRPGANILLPRPGFPI-YELS-AAFRH-IEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGN  188 (343)
Q Consensus       118 ~~l~~~gd~vl~~~p~~~~-~~~~-~~~~g-~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~nptG~  188 (343)
                      .+++++||+|+++.|+|.. |... +...+ ...+.++.+  .++.+|+++|++++++      +++++++|||+  ||.
T Consensus        67 ~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~  142 (333)
T PRK10534         67 LSHCERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAA--ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGK  142 (333)
T ss_pred             HHhcCCCCeeEEechhhhhHhcCCchHHhcCceEEeecCC--CCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCe
Confidence            8888999999999888853 3321 23333 566666553  4578999999998865      57889999766  599


Q ss_pred             ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEE-EEEEeCCCCCCC
Q 019298          189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG-WFVTTDPCGMFR  267 (343)
Q Consensus       189 ~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G-~i~~~~~~~~~~  267 (343)
                      +++.+++++|+++|+++++++++||+|......... ..........+.+ +.||||.|+++   +| |++++       
T Consensus       143 v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~-~~~~~~~~~~~~~-~~s~SK~~~~~---~G~~~~~~-------  210 (333)
T PRK10534        143 VLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYG-CELKEITQYCDSF-TICLSKGLGTP---VGSLLVGN-------  210 (333)
T ss_pred             ecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcC-CCHHHHHhcCCEE-EEEeEcCCCCc---ccceEEcC-------
Confidence            999999999999999999999999998732211001 1111111111222 34899998764   68 56653       


Q ss_pred             chHHHHHHhhhhcccc---CcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          268 KPKVVERMKKYFDILG---DPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       268 ~~~~~~~l~~~~~~~~---~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                       +++++.+++......   ..+...+.++ ...|.+   ..+..++..++|+++.+.|+++ |+.+..+ +++|+|+++
T Consensus       211 -~~~i~~~~~~~~~~~~~~~~~~~~~a~~-~~~l~~---~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~-~~nfv~~~~  282 (333)
T PRK10534        211 -RDYIKRARRWRKMTGGGMRQAGILAAAG-LYALKH---NVARLQEDHDNAAWLAEQLREA-GADVMRQ-DTNMLFVRV  282 (333)
T ss_pred             -HHHHHHHHHHHHHhCCchhhHHHHHHHH-HHHHHh---hHHHHHHHHHHHHHHHHHHHhC-CCccCCC-CceEEEEEC
Confidence             578888887764221   2233445554 333332   2233444555778999999998 8887555 799999874

>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]

Probab=99.95  E-value=4.3e-26  Score=191.48  Aligned_cols=331  Identities=14%  Similarity=0.135  Sum_probs=241.9

Q ss_pred             cccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhc-CCCCCCCCCCCC
Q 019298            2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLS-EKFNGYAPTAGL   79 (343)
Q Consensus         2 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~Y~~~~g~   79 (343)
                      .+......++|.  .++.+...+.++.     .+.++||++|..+...+-| ..|.++++-.+...+ ...++|.|..|.
T Consensus         4 s~f~~I~~a~p~--~vf~~~~~y~~d~-----~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl   76 (410)
T KOG1412|consen    4 SFFANIPVAPPI--EVFKLNASYGEDL-----DPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGL   76 (410)
T ss_pred             chhcCCccCChH--HHHhhHHHhcccC-----CcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCc
Confidence            344455566655  6788888888877     6788999999877655555 567777665555443 356799999999


Q ss_pred             HHHHHHHHHHHhhhCCCCCCCCcE--EEecChHHHHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcC-ceeEEeecC
Q 019298           80 PLTRRAIAEYLSRDLPYKLTPNDV--FVTSGCTQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRH-IEVRHFDLL  154 (343)
Q Consensus        80 ~~lr~~ia~~~~~~~~~~~~~~~i--~~~~g~~~al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g-~~~~~~~~~  154 (343)
                      +.|+++.++.+-+.....+..+++  +-+-|+++|+......|.  -+..+|.+..|+|.+....++..| ..+..++..
T Consensus        77 ~~F~~~A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yW  156 (410)
T KOG1412|consen   77 PTFTKAATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYW  156 (410)
T ss_pred             hhhhhhhHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeee
Confidence            999999999985543344667776  456778999998877763  245689999999999999999999 456667776


Q ss_pred             CCCCCCCCHHHHHhhhcCCc--eEEEEeCC-CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC--Cccc
Q 019298          155 PDKGWEVDLDDIESLADQNT--VALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF--VPMG  229 (343)
Q Consensus       155 ~~~~~~~d~~~l~~~~~~~~--~~i~~~~p-~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~--~~~~  229 (343)
                      ..+.-.+|++.+...+...|  ..++++.+ |||||...+.|+|.+|++..++.+.+.+.|-+|++|..++...  ..++
T Consensus       157 d~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR  236 (410)
T KOG1412|consen  157 DAENKCVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIR  236 (410)
T ss_pred             cCCCceecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHH
Confidence            66667899999988876533  34556666 9999999999999999999999999999999999998876532  2333


Q ss_pred             ccCCC-CCEEEEccCccccCCCCCcEEEE--EEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhh---H
Q 019298          230 VFGST-VPILTLGSLSKRWIVPGWRLGWF--VTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTI---M  302 (343)
Q Consensus       230 ~~~~~-~~~i~~~S~sK~~~~~G~r~G~i--~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~---~  302 (343)
                      .+-+. ..+++|.||+|.||+.+.|+|-+  ++.++..+   +.+..+|.... ...++|+.+....+ ...|+.+   .
T Consensus       237 ~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i---~~v~SQl~lviR~~~SNPPAyGArIV-~kvL~tP~lre  312 (410)
T KOG1412|consen  237 YFVEQGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVI---AGVKSQLTLVIRSNWSNPPAYGARIV-HKVLSTPELRE  312 (410)
T ss_pred             HHHhcCCeEEEEhhhhhhcccccccccceEEEecChhHH---HHHHHHHHHHHhhccCCCcchhhHHH-HHHhcCHHHHH
Confidence            33222 35899999999999999999984  44332211   12334444443 33567777777777 6677765   3


Q ss_pred             HHHH----HHHHHHHHHHHHHHhhcCC--CC-ceeeCCCCceEeeecC
Q 019298          303 QIMI----HGNFLENFAGSCVPSYKLI--PE-LINFKSTGSSLKYLDL  343 (343)
Q Consensus       303 ~~l~----~~~~~~~~~~~~~~~L~~~--~g-~~~~~~~~g~~~~~~l  343 (343)
                      +|..    +-.++.+.|..+++.|..+  || |.....|-|||-|-.|
T Consensus       313 ~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGL  360 (410)
T KOG1412|consen  313 QWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYTGL  360 (410)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHhhccceeecCC
Confidence            4443    6667788888888888765  55 5555778899877543

>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.95  E-value=3.7e-25  Score=202.83  Aligned_cols=263  Identities=13%  Similarity=0.093  Sum_probs=183.0

Q ss_pred             CCCcHHHHHHHHHHHhcCCC-----CCCC--CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCC
Q 019298           51 FHTTHVATEAVAEALLSEKF-----NGYA--PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP  123 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~-----~~Y~--~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~  123 (343)
                      -+..+++.+++.+.......     +...  ...-..++++.+++++      ++  +++++++|+++++..++.+++++
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~--~~i~~~~g~t~al~~~l~~~~~~   82 (361)
T cd06452          11 GRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFL------GM--DEARVTPGAREGKFAVMHSLCEK   82 (361)
T ss_pred             CCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHc------CC--ceEEEeCCHHHHHHHHHHHhcCC
Confidence            45778888888887632110     0111  1123568899999988      23  89999999999999999999999


Q ss_pred             CCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc-------CCceEEEEeCCCCCcccccCHHHHH
Q 019298          124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-------QNTVALVIINPGNPCGNVYSYQHLQ  196 (343)
Q Consensus       124 gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-------~~~~~i~~~~p~nptG~~~~~~~l~  196 (343)
                      ||+|+++.++|......++..|++++.++.+.+.++.+|+++++++++       .+++++++++|+||||..   .+++
T Consensus        83 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~---~~~~  159 (361)
T cd06452          83 GDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNL---HDAK  159 (361)
T ss_pred             CCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeee---ccHH
Confidence            999999999988777778889999999988765557899999998885       267899999999999988   6678


Q ss_pred             HHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHh
Q 019298          197 KLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK  276 (343)
Q Consensus       197 ~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~  276 (343)
                      +|+++|+++|+++|+|++|.....    ......+   +..++++|+||+++. +.|+||++++        ++++++++
T Consensus       160 ~i~~~~~~~~~~vivD~a~~~g~~----~~~~~~~---~~d~~~~s~~K~l~~-~~~~G~l~~~--------~~~~~~l~  223 (361)
T cd06452         160 KIAKVCHEYGVPLLLNGAYTVGRM----PVSGKEL---GADFIVGSGHKSMAA-SAPIGVLATT--------EEWADIVF  223 (361)
T ss_pred             HHHHHHHHcCCeEEEECCcccCCc----CCCHHHc---CCCEEEecCCccccC-CCCeEEEEEC--------HHHHHHHh
Confidence            899999999999999999985221    1111122   345999999999874 4599999985        35777776


Q ss_pred             hhhcc--------c-cCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeC--CCCceEeee
Q 019298          277 KYFDI--------L-GDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFK--STGSSLKYL  341 (343)
Q Consensus       277 ~~~~~--------~-~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~--~~~g~~~~~  341 (343)
                      .....        . .........++ .+++....+.++...+..++++++.+.|+++||+.+..  +...+|+.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~al~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~  298 (361)
T cd06452         224 RTSQMFKIKEVELLGCTLRGAPLVTL-MASFPHVKERVKRWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFF  298 (361)
T ss_pred             ccccccccceeeeeccccCchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEE
Confidence            54321        0 11111112222 22222112233334444455678889999998888642  334444433

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.

>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative

Probab=99.95  E-value=2.4e-25  Score=205.92  Aligned_cols=273  Identities=16%  Similarity=0.122  Sum_probs=197.9

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++++||+.+++   ++++++|.+.+++.+++.+.  ....|....|.+++++++++++.+.++.   ++.+++++| ++
T Consensus        32 g~~~id~~~~~~---~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~~i~~~sG-~~  104 (385)
T TIGR01825        32 GKEVINLSSNNY---LGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT---EAALVFQSG-FN  104 (385)
T ss_pred             CceEEEeeccCc---cCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC---CcEEEECcH-HH
Confidence            788999999863   34778899999999988642  2346777789999999999999886662   456777777 56


Q ss_pred             HHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC----CceEEEEeCCCCCcc
Q 019298          112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----NTVALVIINPGNPCG  187 (343)
Q Consensus       112 al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~i~~~~p~nptG  187 (343)
                      ++..++.+++++||.|+++.|+|..+...+...|.++..++       .+|++++++.+++    +++++++++++||||
T Consensus       105 a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG  177 (385)
T TIGR01825       105 TNQGVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPSYGKKLIVTDGVFSMDG  177 (385)
T ss_pred             HHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEecCCcCCC
Confidence            67788888899999999999999998877777787766542       3678888876653    567777778899999


Q ss_pred             cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcc--cccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCC
Q 019298          188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM--GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGM  265 (343)
Q Consensus       188 ~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~--~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~  265 (343)
                      .+.+   +++|.++|++||+++|+||+|..+.++.......  .... .+.++++.||||.|+++|   ||++++     
T Consensus       178 ~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~g---G~~~~~-----  245 (385)
T TIGR01825       178 DVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIGVVG---GYAAGH-----  245 (385)
T ss_pred             CccC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhhcCC---CEEecC-----
Confidence            9855   6788999999999999999998765542111111  1122 356899999999998766   998874     


Q ss_pred             CCchHHHHHHhhhhc-c-cc-CcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCce
Q 019298          266 FRKPKVVERMKKYFD-I-LG-DPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSS  337 (343)
Q Consensus       266 ~~~~~~~~~l~~~~~-~-~~-~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~  337 (343)
                         +++++.+..... . .. ..++..+.++ .+++....++.+..+++.++++.+.+.|+++ |+++..+++.+
T Consensus       246 ---~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~  315 (385)
T TIGR01825       246 ---KELIEYLKNRARPFLFSTAQPPAVVAAL-AAAVDELQRSPELMERLWDNTRFFKAGLGKL-GYDTGGSETPI  315 (385)
T ss_pred             ---HHHHHHHHHhCccccccCCCCHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCE
Confidence               367777765432 1 12 2345555555 4444322222346677788899999999887 78765666543

This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.

>cd06502 TA_like Low-specificity threonine aldolase (TA)

Probab=99.95  E-value=7.9e-26  Score=205.54  Aligned_cols=262  Identities=13%  Similarity=0.091  Sum_probs=187.5

Q ss_pred             CCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEE
Q 019298           49 SCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANIL  128 (343)
Q Consensus        49 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl  128 (343)
                      +.+++++.+++++.++....  ..|.+.....++++.+++++      +  ++++++++|+++++..+++.+.++||+|+
T Consensus         6 ~~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~~a~~~------g--~~~~~~~~~gt~a~~~~~~~l~~~gd~v~   75 (338)
T cd06502           6 TVTGPTPEMLEAMAAANVGD--DVYGEDPTTAKLEARAAELF------G--KEAALFVPSGTAANQLALAAHTQPGGSVI   75 (338)
T ss_pred             cCCCCCHHHHHHHHhcccCC--cccCCCHHHHHHHHHHHHHh------C--CCeEEEecCchHHHHHHHHHhcCCCCeEE
Confidence            34678999999998865322  36766667788888888887      2  56788888889999999999999999999


Q ss_pred             EeCCCCcchHH---HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-------CceEEEEeCCCCCcccccCHHHHHHH
Q 019298          129 LPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-------NTVALVIINPGNPCGNVYSYQHLQKL  198 (343)
Q Consensus       129 ~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-------~~~~i~~~~p~nptG~~~~~~~l~~l  198 (343)
                      ++.|+|..+..   .+...|.+++.++.+   .+.+|++++++++++       +++++++++|+|| |.+++.+++++|
T Consensus        76 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i  151 (338)
T cd06502          76 CHETAHIYTDEAGAPEFLSGVKLLPVPGE---NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAI  151 (338)
T ss_pred             EecCcceeeecCCcHHHHcCceEEeecCC---CCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHH
Confidence            99999976432   345578888888763   256999999999864       6789999999997 667799999999


Q ss_pred             HHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh
Q 019298          199 AETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY  278 (343)
Q Consensus       199 ~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~  278 (343)
                      +++|+++|+++|+|++|..+....... .+.......+ +++.|+||+|+++|   |+++..+       ++++++++..
T Consensus       152 ~~~~~~~~~~livDea~~~~~~~~~~~-~~~~~~~~~d-~~~~s~sK~~~~~~---g~~~~~~-------~~~~~~~~~~  219 (338)
T cd06502         152 SALAKENGLPLHLDGARLANAAAALGV-ALKTYKSGVD-SVSFCLSKGGGAPV---GAVVVGN-------RDFIARARRR  219 (338)
T ss_pred             HHHHHHcCCeEeechHHHHHHHHhcCC-CHHHHHhcCC-EEEEeccccCCCcc---ceEEECC-------HHHHHHHHHH
Confidence            999999999999999986542211111 1111111122 56889999999887   5544422       4688887765


Q ss_pred             hcc---ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEee
Q 019298          279 FDI---LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKY  340 (343)
Q Consensus       279 ~~~---~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~  340 (343)
                      ...   ....+++.+.++ ..+|.. ..+.+.++++.++++++.+.|+.+ |+.+..+. +.|+.
T Consensus       220 ~~~~~~~~~~~~~~~~a~-~~~L~~-~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~-~~~~~  280 (338)
T cd06502         220 RKQAGGGMRQSGFLAAAG-LAALEN-DLWLRRLRHDHEMARRLAEALEEL-GGLESEVQ-TNIVL  280 (338)
T ss_pred             HHHhCCChhhHHHHHHHH-HHHhcC-chHHHHHHHHHHHHHHHHHHHHhc-CCCccccc-CCeEE
Confidence            421   234455666666 555554 245566678888889999999887 45543333 33333

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.

>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.94  E-value=6.2e-25  Score=201.73  Aligned_cols=261  Identities=13%  Similarity=0.079  Sum_probs=181.3

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCC-------CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCC
Q 019298           53 TTHVATEAVAEALLSEKFNGYAP-------TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA  125 (343)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~Y~~-------~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd  125 (343)
                      ..+++.+++.+.-.....+++..       ..-...+++.+|++++        .+++++++|+++++..++.++.++||
T Consensus        20 ~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g--------~~~~~i~~g~~~a~~~~~~~l~~~gd   91 (370)
T TIGR02539        20 LTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFLG--------MDEARVTHGAREGKFAVMHALCKEGD   91 (370)
T ss_pred             CcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHhC--------CCceEEECChHHHHHHHHHHhhCCCC
Confidence            55667777766543211111110       0124678888888882        35677899999999999999999999


Q ss_pred             eEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-------CceEEEEeCCCCCcccccCHHHHHHH
Q 019298          126 NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-------NTVALVIINPGNPCGNVYSYQHLQKL  198 (343)
Q Consensus       126 ~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-------~~~~i~~~~p~nptG~~~~~~~l~~l  198 (343)
                      .|+++.+.|......++..|.+++.++...+.++.+|+++|++.++.       ++++|++++|+||||...   ++++|
T Consensus        92 ~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~---~l~~i  168 (370)
T TIGR02539        92 WVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLP---DAGKV  168 (370)
T ss_pred             EEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCcccc---CHHHH
Confidence            99999999766667788899999999876555688999999998852       577899999999999984   56778


Q ss_pred             HHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh
Q 019298          199 AETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY  278 (343)
Q Consensus       199 ~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~  278 (343)
                      +++|+++|+++|+|++|.....+    ......   +..++++|+||+|++ |.|+||++++        +++++.++..
T Consensus       169 ~~la~~~~~~livDea~~~g~~~----~~~~~~---~~di~v~s~sK~~~~-~g~~G~l~~~--------~~~i~~l~~~  232 (370)
T TIGR02539       169 AKVCREKGVPLLLNCAYTVGRMP----VSAKEI---GADFIVGSGHKSMAA-SGPCGVLGMS--------EEWEDIVLRK  232 (370)
T ss_pred             HHHHHHcCCeEEEECccccCCcC----CCHHHc---CCCEEEeeCcccccC-CCCEEEEEEC--------HHHHhhhccc
Confidence            88899999999999999974211    111111   234778999999874 6689999985        3678877765


Q ss_pred             hccc---------cCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCcee--eCCCCceEeeec
Q 019298          279 FDIL---------GDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN--FKSTGSSLKYLD  342 (343)
Q Consensus       279 ~~~~---------~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~--~~~~~g~~~~~~  342 (343)
                      ...+         .......+.++ .+++.+..++++...+..++++++.+.|+++ |+.+  ..|+.++|++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~-~~al~~~~~~l~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~  305 (370)
T TIGR02539       233 SRYSPVKEVELLGCTSRGAPIVTM-MASFPHVVERVKRWDEEVKKTRWFVAELEDI-GFIQLGQKPKEHDLVKFE  305 (370)
T ss_pred             ccCCccceeeeecccccccHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CcEEEccCCCcCceEEEE
Confidence            4210         11111133333 3344433344443334444456899999998 7774  357788888775

Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.

>PLN02721 threonine aldolase

Probab=99.94  E-value=5e-25  Score=201.47  Aligned_cols=277  Identities=16%  Similarity=0.113  Sum_probs=181.1

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~  114 (343)
                      ..+++|+.+.+.    . +++.+++++++.........|++  ...+|+++++++++.        +.+++++++++++.
T Consensus         5 ~~~~~~~~~~~~----~-~~~~~~~a~~~~~~~~~~~~~~~--~~~~l~~~la~~~~~--------~~~~~~~~Gs~a~~   69 (353)
T PLN02721          5 SRVVDLRSDTVT----K-PTDAMRAAMANAEVDDDVLGYDP--TALRLEEEMAKIFGK--------EAALFVPSGTMGNL   69 (353)
T ss_pred             hhhhhhhccccc----C-CCHHHHHHHHhccCCCcccCCCH--HHHHHHHHHHHHhCC--------ceeEEecCccHHHH
Confidence            356889999854    3 57888888876422222233433  368999999999942        33566666666666


Q ss_pred             HHHHHhcC-CCCeEEEeCCCCcchHH---HHHhcCceeEEeecCCCCCCCCCHHHHHhhhc-------CCceEEEEeCC-
Q 019298          115 VAMALLSR-PGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-------QNTVALVIINP-  182 (343)
Q Consensus       115 ~~~~~l~~-~gd~vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-------~~~~~i~~~~p-  182 (343)
                      .++..+++ +||+|++++|+|.....   .+...|.+++.++.+  .++.+|++++++.++       +++++++++++ 
T Consensus        70 ~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~  147 (353)
T PLN02721         70 ISVLVHCDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNN--EDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTH  147 (353)
T ss_pred             HHHHHHccCCCCeEEEcCccceehhcccchhhhcCceeEecCCC--cCCCcCHHHHHHHHHhccCCCCCcceEEEEeccc
Confidence            77777777 99999999999864443   567789888888764  345689999999987       47888888775 


Q ss_pred             CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCC
Q 019298          183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP  262 (343)
Q Consensus       183 ~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~  262 (343)
                      +||||.+++.+++++|.++|+++|+++|+|++|.......... ....... ....++.|+||.|+.   ++||++..+ 
T Consensus       148 ~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~-~~~~~~~-~~d~~~~s~sK~l~~---~~G~~~~~~-  221 (353)
T PLN02721        148 ANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGV-PVHRLVK-AADSVSVCLSKGLGA---PVGSVIVGS-  221 (353)
T ss_pred             cccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCC-CHHHHhh-hCCEEEEecccccCC---ceeeEEecC-
Confidence            7899999999999999999999999999999986422110011 1111111 112445579999764   357644322 


Q ss_pred             CCCCCchHHHHHHhhhhccc-cCcchHHHHHH-HhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCcee-eCCCCceEe
Q 019298          263 CGMFRKPKVVERMKKYFDIL-GDPATFIQVCI-MYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN-FKSTGSSLK  339 (343)
Q Consensus       263 ~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~a~-~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~-~~~~~g~~~  339 (343)
                            +++++.+....... .........++ ....+   ..+++..++..++++.+.+.|++++++.+ ..+..++|+
T Consensus       222 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~  292 (353)
T PLN02721        222 ------KSFIRKAKRLRKTLGGGMRQVGVLAAAALVAL---QENVPKLEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIV  292 (353)
T ss_pred             ------HHHHHhHHHHHHhcCCCeehhHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhCCCcEEecCCccceEE
Confidence                  46777766554321 12222222221 01112   23344444556778899999998878753 334445678


Q ss_pred             eecC
Q 019298          340 YLDL  343 (343)
Q Consensus       340 ~~~l  343 (343)
                      |+++
T Consensus       293 ~~~~  296 (353)
T PLN02721        293 YFDI  296 (353)
T ss_pred             EEEc
Confidence            8764

>PRK13392 5-aminolevulinate synthase; Provisional

Probab=99.94  E-value=8.9e-25  Score=203.57  Aligned_cols=271  Identities=14%  Similarity=0.137  Sum_probs=186.5

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF------NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~  107 (343)
                      +++.++|+..+   |.+++.+|.+++++.+++.....      ..|+......+|++.++++++       .++.+++++
T Consensus        45 ~~~~~~~~sn~---yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g-------~~~~i~~~s  114 (410)
T PRK13392         45 PRRVTIWCSND---YLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHG-------KESALLFTS  114 (410)
T ss_pred             CceEEEEECCC---ccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhC-------CCCEEEECc
Confidence            34578888866   45688899999999998864211      123222245789999999883       245666666


Q ss_pred             ChHHHHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhh----cCCceEEEEeC
Q 019298          108 GCTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA----DQNTVALVIIN  181 (343)
Q Consensus       108 g~~~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~----~~~~~~i~~~~  181 (343)
                      | ++++..++..+..  +|+.|+++...|..+...++..|.++..++.   +    |.+.+++.+    .+++++|++++
T Consensus       115 G-~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~---~----d~~~l~~~l~~~~~~~t~~v~i~~  186 (410)
T PRK13392        115 G-YVSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRH---N----DLADLEEQLASVDPDRPKLIAFES  186 (410)
T ss_pred             H-HHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeC---C----CHHHHHHHHHhccCCCCEEEEEeC
Confidence            6 5677777776643  7898888888888877778888888766642   1    344444443    24678999999


Q ss_pred             CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCC-EEEEccCccccCCCCCcEEEEEEe
Q 019298          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRWIVPGWRLGWFVTT  260 (343)
Q Consensus       182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~-~i~~~S~sK~~~~~G~r~G~i~~~  260 (343)
                      |+||||.+++   +++|.++|+++|+++|+||+|....++..........+..++ .++++|+||+||++|   ||++++
T Consensus       187 ~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~  260 (410)
T PRK13392        187 VYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAAS  260 (410)
T ss_pred             CCCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhcC
Confidence            9999999976   778888888999999999999954443221111111111122 388999999999988   999874


Q ss_pred             CCCCCCCchHHHHHHhhhhc---cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCce
Q 019298          261 DPCGMFRKPKVVERMKKYFD---ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSS  337 (343)
Q Consensus       261 ~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~  337 (343)
                              +++++.+++...   .+...++..+.++ .++|+......+.+++++++++.+.+.|+++ |+.+..+++++
T Consensus       261 --------~~~~~~l~~~~~~~~~s~~~~~~~~~a~-~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~  330 (410)
T PRK13392        261 --------ADLIDFVRSFAPGFIFTTALPPAVAAGA-TAAIRHLKTSQTERDAHQDRVAALKAKLNAN-GIPVMPSPSHI  330 (410)
T ss_pred             --------HHHHHHHHHhCcchhccCcCCHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCE
Confidence                    367887776543   1334555666666 5666543333346778899999999999988 78865566555


Q ss_pred             E
Q 019298          338 L  338 (343)
Q Consensus       338 ~  338 (343)
                      +
T Consensus       331 ~  331 (410)
T PRK13392        331 V  331 (410)
T ss_pred             E
Confidence            4

>PRK05958 8-amino-7-oxononanoate synthase; Reviewed

Probab=99.94  E-value=2.3e-24  Score=199.46  Aligned_cols=279  Identities=14%  Similarity=0.128  Sum_probs=187.3

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  110 (343)
                      +++++|||+.+++   .++.++|.+.+++.+++..-.  ...|....|...+++.+++.+.+.++   .++.++++ +++
T Consensus        37 ~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~---~~~~i~~~-~g~  109 (385)
T PRK05958         37 DGRRMLNFASNDY---LGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG---AERALLFS-SGY  109 (385)
T ss_pred             CCceEEEeeCCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC---CCcEEEEC-cHH
Confidence            4889999999862   235578999999999886411  11222223434444444444444333   24445554 555


Q ss_pred             HHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCC---ceEEEEeCCCCCcc
Q 019298          111 QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN---TVALVIINPGNPCG  187 (343)
Q Consensus       111 ~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~---~~~i~~~~p~nptG  187 (343)
                      +++..+++.++++||.|+++.|+|+.+...+...|.+++.++.       .|++.+++.+++.   +.++++.+++|++|
T Consensus       110 ~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G  182 (385)
T PRK05958        110 AANLAVLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKWRAGRALIVTESVFSMDG  182 (385)
T ss_pred             HHHHHHHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhccCCCeEEEEEecccCCC
Confidence            6666777888999999999999999999888888988887753       3788998888652   44555556799999


Q ss_pred             cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCC--CCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCC
Q 019298          188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD--KPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGM  265 (343)
Q Consensus       188 ~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~--~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~  265 (343)
                      ..   .++++|+++|++||+++|+||+|+.+.++.  ........+...++++++.|+||.|+.+|   ||++++     
T Consensus       183 ~~---~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G---g~~~~~-----  251 (385)
T PRK05958        183 DL---APLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG---AAVLGS-----  251 (385)
T ss_pred             Cc---CCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC---cEEEcC-----
Confidence            88   558889999999999999999997655442  22211112334457899999999998877   898774     


Q ss_pred             CCchHHHHHHhhhh-cc--ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298          266 FRKPKVVERMKKYF-DI--LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD  342 (343)
Q Consensus       266 ~~~~~~~~~l~~~~-~~--~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~  342 (343)
                         +++.+.+.... ..  ....++....++ .++|+......+.++++.++++.+.+.|+.+ |+++..+.+ .|+|+.
T Consensus       252 ---~~~~~~~~~~~~~~~~~~~~~~~~~aa~-~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~-~~~~~~  325 (385)
T PRK05958        252 ---ETLIDYLINRARPFIFTTALPPAQAAAA-RAALRILRREPERRERLAALIARLRAGLRAL-GFQLMDSQS-AIQPLI  325 (385)
T ss_pred             ---HHHHHHHHHhCccceecCCCCHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCcCCCCC-CEEEEE
Confidence               35666665432 11  223444444444 4555432222236788899999999999987 677655544 455654

>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT)

Probab=99.94  E-value=3e-24  Score=199.71  Aligned_cols=280  Identities=15%  Similarity=0.072  Sum_probs=192.6

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC------CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE------KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~  107 (343)
                      +++.++|..+.      ..+++.+++++...+...      ....|....+.+.+++.+++++.+.+|.  +...|+++ 
T Consensus        18 ~~~~~~~~~~~------~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~--~~~~v~~~-   88 (402)
T cd00378          18 QRETLELIASE------NFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGA--EYANVQPH-   88 (402)
T ss_pred             HHhCeeeeccC------CcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCC--CceeeecC-
Confidence            35578887776      345889999987765321      1223444456677787766666555553  33455555 


Q ss_pred             ChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH-----HHhcCceeEEeecCCC-CCCCCCHHHHHhhhc-CCceEEEEe
Q 019298          108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELS-----AAFRHIEVRHFDLLPD-KGWEVDLDDIESLAD-QNTVALVII  180 (343)
Q Consensus       108 g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~-----~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~~~-~~~~~i~~~  180 (343)
                      |+++++..++.+++++||+|+++.|+|+.+...     ++..|.++..+++..+ +++.+|++++++.+. +++++++++
T Consensus        89 sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~  168 (402)
T cd00378          89 SGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAG  168 (402)
T ss_pred             CcHHHHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEec
Confidence            457999999999999999999999999866443     5567777777766544 267899999999885 578888888


Q ss_pred             CCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCC-CccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298          181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVY-GHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT  259 (343)
Q Consensus       181 ~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay-~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~  259 (343)
                      +|+||+.     .++++|+++|+++|+++|+|++| .++.+.+....++.  .  . .++++|+||+|  +|+|.||+++
T Consensus       169 ~~~~~~~-----~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~--~-dv~~~s~sK~l--~G~~gg~i~~  236 (402)
T cd00378         169 ASAYPRP-----IDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--G--A-DVVTTTTHKTL--RGPRGGLILT  236 (402)
T ss_pred             CcccCCC-----cCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--C--C-cEEEeccccCC--CCCCceEEEe
Confidence            8888743     35788999999999999999996 44444442222222  1  1 27899999985  7899999998


Q ss_pred             eCCCCCCCchHHHHHHhhhhc-cccCcch-HHHHHHHhccchhh-H-HHHHHHHHHHHHHHHHHHhhcCCCCceee-CCC
Q 019298          260 TDPCGMFRKPKVVERMKKYFD-ILGDPAT-FIQVCIMYGCLSTI-M-QIMIHGNFLENFAGSCVPSYKLIPELINF-KST  334 (343)
Q Consensus       260 ~~~~~~~~~~~~~~~l~~~~~-~~~~~~~-~~~~a~~~~~l~~~-~-~~l~~~~~~~~~~~~~~~~L~~~~g~~~~-~~~  334 (343)
                      ++       ++++++++.... ...+.+. ....++ ..++... . .+-+.+++++++++.+.+.|.++ |+.+. .|+
T Consensus       237 ~~-------~~~~~~l~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~  307 (402)
T cd00378         237 RK-------GELAKKINSAVFPGLQGGPHLHVIAAK-AVALKEALEPEFKAYAKQVVENAKALAEALKER-GFKVVSGGT  307 (402)
T ss_pred             cc-------HHHHHHHHHHhCccccCCchHHHHHHH-HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEeecCC
Confidence            53       357777766543 2222222 222222 2222221 2 22337788999999999999988 88854 568


Q ss_pred             CceEeeecC
Q 019298          335 GSSLKYLDL  343 (343)
Q Consensus       335 ~g~~~~~~l  343 (343)
                      +++|+|+++
T Consensus       308 ~~~~v~v~~  316 (402)
T cd00378         308 DNHLVLVDL  316 (402)
T ss_pred             CCeEEEEeC
Confidence            899999874

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.

>PRK02627 acetylornithine aminotransferase; Provisional

Probab=99.93  E-value=3.3e-24  Score=199.10  Aligned_cols=286  Identities=15%  Similarity=0.098  Sum_probs=191.9

Q ss_pred             cccceeEeccCCCCCCCCCCC-cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFHT-THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++..+||..|.+..  .++. +|.+.+++++++....   +....+..++++.+++++.+..    ..+++++++|+++
T Consensus        37 dg~~~iD~~~g~~~~--~lG~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~la~~l~~~~----~~~~v~~~~gg~e  107 (396)
T PRK02627         37 DGKEYLDFLAGIAVN--NLGHCHPKLVEAIQEQAAKLI---HTSNLYYIEPQEELAEKLVELS----GMDKVFFCNSGAE  107 (396)
T ss_pred             CCCEEEECCccHHhc--cCCCCCHHHHHHHHHHHhhcc---ccccccCCHHHHHHHHHHHhhc----CCCEEEECCCcHH
Confidence            378899999987652  3454 6999999999886531   1111233578888888887643    3489999999999


Q ss_pred             HHHHHHHHhcCCC-------CeEEEeCCCCcchHHHHHhcCceeEE-eecCC-CCCC----CCCHHHHHhhhcCCceEEE
Q 019298          112 AIDVAMALLSRPG-------ANILLPRPGFPIYELSAAFRHIEVRH-FDLLP-DKGW----EVDLDDIESLADQNTVALV  178 (343)
Q Consensus       112 al~~~~~~l~~~g-------d~vl~~~p~~~~~~~~~~~~g~~~~~-~~~~~-~~~~----~~d~~~l~~~~~~~~~~i~  178 (343)
                      ++..+++.+...+       ++|++..++|.++...+...+..... ....+ ..++    ..|++++++.+++++++++
T Consensus       108 A~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~vi  187 (396)
T PRK02627        108 ANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAITDKTAAVM  187 (396)
T ss_pred             HHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcCCCeEEEE
Confidence            9999999765322       68999999998876655544322111 00000 0111    1289999999987888888


Q ss_pred             EeCCCCCcc-cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEE
Q 019298          179 IINPGNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF  257 (343)
Q Consensus       179 ~~~p~nptG-~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i  257 (343)
                      ++.++||+| .+++.+.+++|.++|++||+++|+||+|.++.+.+.. .++.......+   +.||||.++ +|+|+||+
T Consensus       188 i~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~-~~~~~~~~~pd---i~t~sK~~~-~G~rig~~  262 (396)
T PRK02627        188 LEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKL-FAYQHYGIEPD---IMTLAKGLG-GGVPIGAV  262 (396)
T ss_pred             EecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCce-eeehhcCCCCC---EEEEcchhh-CCcccEEE
Confidence            888899999 6889999999999999999999999999988665432 12222222223   236999998 89999999


Q ss_pred             EEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhc----CCCCceeeC
Q 019298          258 VTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYK----LIPELINFK  332 (343)
Q Consensus       258 ~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~----~~~g~~~~~  332 (343)
                      ++++        ++++.+.... ...++.+++.+.++ .++|+.... .+..++++++.+.+.+.|.    .+|.+.. .
T Consensus       263 ~~~~--------~~~~~~~~~~~~~t~~~~~~~~~aa-~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~  331 (396)
T PRK02627        263 LAKE--------KVADVFTPGDHGSTFGGNPLACAAA-LAVIEIIEE-EGLLENAAEVGEYLRAKLRELLEKYPGIKE-V  331 (396)
T ss_pred             EEcH--------HHHhccCCCCCCCCCCCCHHHHHHH-HHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHHhCCCeee-e
Confidence            9853        5777766432 23557788888888 555542211 1134444444444444443    3433322 2


Q ss_pred             CCCceEeeecC
Q 019298          333 STGSSLKYLDL  343 (343)
Q Consensus       333 ~~~g~~~~~~l  343 (343)
                      +..|+++|+++
T Consensus       332 ~~~g~~~~i~~  342 (396)
T PRK02627        332 RGLGLMIGIEL  342 (396)
T ss_pred             ccCcEEEEEEe
Confidence            33578888764

>PRK10874 cysteine sulfinate desulfinase; Provisional

Probab=99.93  E-value=9.3e-24  Score=196.30  Aligned_cols=272  Identities=18%  Similarity=0.176  Sum_probs=190.5

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCC--CCCC------CCCCHHHHHHHHHHHhhhCCCCC-CCCcEEE
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN--GYAP------TAGLPLTRRAIAEYLSRDLPYKL-TPNDVFV  105 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~Y~~------~~g~~~lr~~ia~~~~~~~~~~~-~~~~i~~  105 (343)
                      .+.+.|+.+..     .+.++.+.+++.+.+.+...+  ....      ....+++|+.+++++      +. ++++|++
T Consensus        18 ~~~~yld~a~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~~i~~   86 (401)
T PRK10874         18 DAGVYLDSAAT-----ALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLL------NAPDAKNIVW   86 (401)
T ss_pred             CceEEEeCCcc-----cCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHc------CCCCCCEEEE
Confidence            35789998872     246788889988887642110  0000      112457888888888      44 6889999


Q ss_pred             ecChHHHHHHHHHHh----cCCCCeEEEeCCCCcc----hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEE
Q 019298          106 TSGCTQAIDVAMALL----SRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL  177 (343)
Q Consensus       106 ~~g~~~al~~~~~~l----~~~gd~vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i  177 (343)
                      ++|+++++..+++++    .++||+|++++|+|++    +...++..|.+++.++.+  .++.+|++++++.++++++++
T Consensus        87 ~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~~t~lv  164 (401)
T PRK10874         87 TRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLG--ADRLPDVDLLPELITPRTRIL  164 (401)
T ss_pred             ECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecC--CCCcCCHHHHHHhcCcCcEEE
Confidence            999999999999998    3789999999999865    455667889999999875  345789999999998899999


Q ss_pred             EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEE
Q 019298          178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF  257 (343)
Q Consensus       178 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i  257 (343)
                      ++++|+||||.+++   +++|+++|+++|+++|+|++|+...+.    ..+...   +..+++.|++|.||.+|  +||+
T Consensus       165 ~i~~~~n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~~----~~~~~~---~~d~~~~s~~K~~gp~G--~G~l  232 (401)
T PRK10874        165 ALGQMSNVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHFP----ADVQAL---DIDFYAFSGHKLYGPTG--IGVL  232 (401)
T ss_pred             EEeCCcccccCcCC---HHHHHHHHHHcCCEEEEECCccccccc----CCchhc---CCCEEEEecccccCCCc--cEEE
Confidence            99999999999965   577888889999999999999753221    112222   23488899999988777  5888


Q ss_pred             EEeCCCCCCCchHHHHHHhhhh---------------------cc-ccCcchHHHHHHHhccchhhH--HHHHHHHHHHH
Q 019298          258 VTTDPCGMFRKPKVVERMKKYF---------------------DI-LGDPATFIQVCIMYGCLSTIM--QIMIHGNFLEN  313 (343)
Q Consensus       258 ~~~~~~~~~~~~~~~~~l~~~~---------------------~~-~~~~~~~~~~a~~~~~l~~~~--~~l~~~~~~~~  313 (343)
                      ++++        ++++++....                     .. .+.++.....++ .+++....  .+.+.+++.++
T Consensus       233 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al-~~al~~l~~~g~~~~~~~~~~  303 (401)
T PRK10874        233 YGKS--------ELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGL-SAALEWLADIDINQAESWSRS  303 (401)
T ss_pred             EEch--------HHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHH-HHHHHHHHHhCHHHHHHHHHH
Confidence            8743        4555543211                     00 123343444444 33332111  11125777788


Q ss_pred             HHHHHHHhhcCCCCceeeCCCCceEee
Q 019298          314 FAGSCVPSYKLIPELINFKSTGSSLKY  340 (343)
Q Consensus       314 ~~~~~~~~L~~~~g~~~~~~~~g~~~~  340 (343)
                      .++.+.+.|+++||+.+..+..+.+++
T Consensus       304 l~~~l~~~l~~~~g~~~~~~~~~~i~~  330 (401)
T PRK10874        304 LATLAEDALAKLPGFRSFRCQDSSLLA  330 (401)
T ss_pred             HHHHHHHHHhcCCCEEEeCCCCCcEEE
Confidence            889999999998898865544444444

>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA

Probab=99.93  E-value=7.9e-24  Score=196.59  Aligned_cols=272  Identities=16%  Similarity=0.180  Sum_probs=188.7

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CCCCC-------CCCHHHHHHHHHHHhhhCCCCC-CCCcEEE
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN-GYAPT-------AGLPLTRRAIAEYLSRDLPYKL-TPNDVFV  105 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~~-------~g~~~lr~~ia~~~~~~~~~~~-~~~~i~~  105 (343)
                      .+.+.|+.+..     .+.++.+.+++.+.+.....+ .+...       ...+++|+.+++++      +. ++++|++
T Consensus        15 ~~~iyld~a~~-----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~~i~~   83 (398)
T TIGR03392        15 DGTVYLDSAAT-----ALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFL------NAPDAENIVW   83 (398)
T ss_pred             CCeEEeeCccc-----cCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHh------CCCCCCeEEE
Confidence            35789998872     246788899988877532111 11111       12356888999988      34 4789999


Q ss_pred             ecChHHHHHHHHHHh----cCCCCeEEEeCCCCcc----hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEE
Q 019298          106 TSGCTQAIDVAMALL----SRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL  177 (343)
Q Consensus       106 ~~g~~~al~~~~~~l----~~~gd~vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i  177 (343)
                      |+|+++++..++.++    .++||+|++++|+|++    +...++..|.+++.++++.  ++.+|+++++++++++++++
T Consensus        84 t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~~i~~~t~lv  161 (398)
T TIGR03392        84 TRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGA--DLLPDIRQLPELLTPRTRIL  161 (398)
T ss_pred             eCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHHhccCceEE
Confidence            999999999999987    4789999999999865    4456678899999998753  35689999999998889999


Q ss_pred             EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEE
Q 019298          178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF  257 (343)
Q Consensus       178 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i  257 (343)
                      ++++|+||||.+++   +++|+++|+++|+++++|++|+...+.    ..+...   +..+++.|++|.|+.+|  +||+
T Consensus       162 ~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~~----~~~~~~---~~d~~~~s~~K~~gp~G--~G~l  229 (398)
T TIGR03392       162 ALGQMSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHGP----PDVQAL---DIDFYAFSGHKLYGPTG--IGVL  229 (398)
T ss_pred             EEECccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCCC----CChhhc---CCCEEEEecccccCCCc--eEEE
Confidence            99999999999965   577888899999999999999753221    122212   23378889999988776  8999


Q ss_pred             EEeCCCCCCCchHHHHHHhhhh---------------------cc-ccCcchHHHHHHHhccchhhH--HHHHHHHHHHH
Q 019298          258 VTTDPCGMFRKPKVVERMKKYF---------------------DI-LGDPATFIQVCIMYGCLSTIM--QIMIHGNFLEN  313 (343)
Q Consensus       258 ~~~~~~~~~~~~~~~~~l~~~~---------------------~~-~~~~~~~~~~a~~~~~l~~~~--~~l~~~~~~~~  313 (343)
                      +++.        ++++++....                     .. .+.++.....++ .+++....  .+.+.+++.++
T Consensus       230 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~-~~al~~l~~~g~~~i~~~~~~  300 (398)
T TIGR03392       230 YGKT--------ELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGL-SAALEWLTDIDIAAAEAWSVS  300 (398)
T ss_pred             EEcH--------HHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHH-HHHHHHHHHhCHHHHHHHHHH
Confidence            8753        4555443211                     00 112333333333 33332111  11226677788


Q ss_pred             HHHHHHHhhcCCCCceeeCCCCceEee
Q 019298          314 FAGSCVPSYKLIPELINFKSTGSSLKY  340 (343)
Q Consensus       314 ~~~~~~~~L~~~~g~~~~~~~~g~~~~  340 (343)
                      .++.+.+.|.++||+.+..+..+.+++
T Consensus       301 l~~~l~~~l~~l~g~~~~~~~~~~i~~  327 (398)
T TIGR03392       301 LADLAEERLAQLPGFRSFRCPGSSLLA  327 (398)
T ss_pred             HHHHHHHHHhcCCCeEEeCCCCCcEEE
Confidence            889999999888888855443344443

Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.

>PRK08247 cystathionine gamma-synthase; Reviewed

Probab=99.93  E-value=5.4e-24  Score=194.75  Aligned_cols=232  Identities=18%  Similarity=0.176  Sum_probs=175.3

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchH----HHHHhcC
Q 019298           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRH  145 (343)
Q Consensus        70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g  145 (343)
                      +.+|+. +...+|++.++++.+        .+..++++|+++++..++ .++++||+|+++.|+|+...    ..+...|
T Consensus        46 y~r~~~-pt~~~le~~la~l~g--------~~~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G  115 (366)
T PRK08247         46 YSRTGN-PTRGVLEQAIADLEG--------GDQGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWN  115 (366)
T ss_pred             ccCCCC-chHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccC
Confidence            456665 356899999999983        234577888899999876 57789999999999998743    3445578


Q ss_pred             ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (343)
Q Consensus       146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~  225 (343)
                      .++..++.       .|++++++++++++++|++++|+||+|..   .++++|+++|+++|+++|+|++|.......   
T Consensus       116 ~~v~~vd~-------~d~~~l~~~i~~~tklv~le~P~NP~~~~---~dl~~I~~la~~~g~~lIvD~t~~~~~~~~---  182 (366)
T PRK08247        116 VRFVYVNT-------ASLKAIEQAITPNTKAIFIETPTNPLMQE---TDIAAIAKIAKKHGLLLIVDNTFYTPVLQR---  182 (366)
T ss_pred             ceEEEECC-------CCHHHHHHhcccCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCccccccC---
Confidence            88887754       37899999998889999999999998765   899999999999999999999996432211   


Q ss_pred             CcccccCCCCCEEEEccCccccCCC-CCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHH
Q 019298          226 VPMGVFGSTVPILTLGSLSKRWIVP-GWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQ  303 (343)
Q Consensus       226 ~~~~~~~~~~~~i~~~S~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~  303 (343)
                       +.    ..+..++++|+||.++.+ +.+.|++++++       +++.++++..+.. ....+++.+.++ ...|+   .
T Consensus       183 -p~----~~g~di~i~S~sK~~~g~~d~~~G~iv~~~-------~~l~~~~~~~~~~~g~~~s~~~a~l~-~~~l~---t  246 (366)
T PRK08247        183 -PL----EEGADIVIHSATKYLGGHNDVLAGLVVAKG-------QELCERLAYYQNAAGAVLSPFDSWLL-IRGMK---T  246 (366)
T ss_pred             -ch----hcCCcEEEeecceeccCCCceeeeEEecCh-------HHHHHHHHHHHHhcCCCCChHHHHHH-HhccC---c
Confidence             11    123459999999998874 46899988753       3577777655543 345667767666 34443   2


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCce-eeCC-CCceEee
Q 019298          304 IMIHGNFLENFAGSCVPSYKLIPELI-NFKS-TGSSLKY  340 (343)
Q Consensus       304 ~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~-~~g~~~~  340 (343)
                      +..+.++.+++++.+.+.|+++|++. ++.| .||+|.|
T Consensus       247 l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf  285 (366)
T PRK08247        247 LALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSF  285 (366)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEE
Confidence            33356677999999999999999987 5555 8999987

>TIGR00707 argD acetylornithine and succinylornithine aminotransferases

Probab=99.93  E-value=3.3e-24  Score=197.95  Aligned_cols=282  Identities=16%  Similarity=0.089  Sum_probs=189.2

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEK--FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  110 (343)
                      +.+.|||..|....+  ++ .+|.+.+++.+++.+..  ...|+. ....+|++.+++++    |    .+++++++|++
T Consensus        26 g~~~id~~~~~~~~~--lG~~~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~----g----~~~~~~~~sg~   94 (379)
T TIGR00707        26 GKEYLDFVAGIAVNS--LGHAHPKLVEALKEQLEKLVHVSNLYYT-EPQEELAEKLVEHS----G----ADRVFFCNSGA   94 (379)
T ss_pred             CCEEEEcCcchhhcc--CCCCCHHHHHHHHHHHhhccccccccCC-HHHHHHHHHHHhhC----C----CCEEEEeCCcH
Confidence            778999999865422  33 55899999999887531  123432 23445555555554    2    35999999999


Q ss_pred             HHHHHHHHHhc---C----CCCeEEEeCCCCcchHHHHHhcCceeEE----eecCCCCCCCC--CHHHHHhhhcCCceEE
Q 019298          111 QAIDVAMALLS---R----PGANILLPRPGFPIYELSAAFRHIEVRH----FDLLPDKGWEV--DLDDIESLADQNTVAL  177 (343)
Q Consensus       111 ~al~~~~~~l~---~----~gd~vl~~~p~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~--d~~~l~~~~~~~~~~i  177 (343)
                      +++..+++.+.   .    ++|+|++++|+|+.+...+...+.....    .++..+..+..  |++.+++.++++++++
T Consensus        95 ~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v  174 (379)
T TIGR00707        95 EANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAV  174 (379)
T ss_pred             HHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEE
Confidence            99999988662   2    3799999999998887766665543321    12221111111  7999999988778888


Q ss_pred             EEeCCCCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEE
Q 019298          178 VIINPGNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW  256 (343)
Q Consensus       178 ~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~  256 (343)
                      +++.++||+|.. ++.+++++|.++|+++++++|+||+|.++.+.+.. .+........+++   +|||.++ +|+|+||
T Consensus       175 ~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~-~~~~~~~~~~d~~---t~sK~~~-~G~riG~  249 (379)
T TIGR00707       175 IVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKF-FAYEHYGIEPDII---TLAKGLG-GGVPIGA  249 (379)
T ss_pred             EEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchh-hhHHhcCCCCCEE---EEccccc-CCcccEE
Confidence            886557788864 78999999999999999999999999987655432 1211122222333   6899998 9999999


Q ss_pred             EEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCC---CCceeeC
Q 019298          257 FVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLI---PELINFK  332 (343)
Q Consensus       257 i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~---~g~~~~~  332 (343)
                      ++++        +++++.++... ....+.+++.|.++ .++|+.... .+.+++++++++.+.+.|+++   .++.. .
T Consensus       250 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~aa-~aaL~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~  318 (379)
T TIGR00707       250 TLAK--------EEVAEAFTPGDHGSTFGGNPLACAAA-LAVLEVIEK-ERLLENVKEKGDYFKERLEELGKNYPNKE-V  318 (379)
T ss_pred             EEEc--------HHHHhhhcCCCCCCCCCCCHHHHHHH-HHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHhhCCCCc-c
Confidence            9985        36888877642 23456788888888 555542111 125667777777777776653   12211 2


Q ss_pred             CCCceEeeec
Q 019298          333 STGSSLKYLD  342 (343)
Q Consensus       333 ~~~g~~~~~~  342 (343)
                      +..|+|+|++
T Consensus       319 ~~~g~~~~~~  328 (379)
T TIGR00707       319 RGKGLMLGIE  328 (379)
T ss_pred             ccCceEEEEE
Confidence            3468888875

Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)

>PRK07179 hypothetical protein; Provisional

Probab=99.93  E-value=8.4e-24  Score=196.82  Aligned_cols=273  Identities=14%  Similarity=0.060  Sum_probs=189.8

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC---C--CCCCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE---K--FNGYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~Y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~  107 (343)
                      +...++|+..+   |.++..+|++++++.++++.-   .  ...|.. .....+|++.+++++        ..+.+++++
T Consensus        53 g~~~~~~~~~~---YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~--------g~~~~~~~~  121 (407)
T PRK07179         53 GPDAIILQSND---YLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFT--------GFESCLLCQ  121 (407)
T ss_pred             CCcEEEeecCC---ccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHh--------CCCcEEEEC
Confidence            55567787766   456778899999999998641   1  112211 123578888898888        235678899


Q ss_pred             ChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCc
Q 019298          108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPC  186 (343)
Q Consensus       108 g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~npt  186 (343)
                      |+++++..+++++..+||.|++..+.|......+...|.++..++.       .|++++++.+++ ++++|++++++|||
T Consensus       122 sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~lV~v~~v~n~t  194 (407)
T PRK07179        122 SGWAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-------NDVDHLRRQIERHGPGIIVVDSVYSTT  194 (407)
T ss_pred             CHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCCC
Confidence            9999999999999999999999999998887777778887665532       489999998875 57788888999999


Q ss_pred             ccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCC-EEEEccCccccCCCCCcEEEEEEeCCCCC
Q 019298          187 GNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRWIVPGWRLGWFVTTDPCGM  265 (343)
Q Consensus       187 G~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~-~i~~~S~sK~~~~~G~r~G~i~~~~~~~~  265 (343)
                      |.+.+   +++|.++|+++|+++|+||+|....++......+..++...+ .+++.|+||+++.   |+||++++     
T Consensus       195 G~i~p---l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g~---~~G~l~~~-----  263 (407)
T PRK07179        195 GTIAP---LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAG---RAGIITCP-----  263 (407)
T ss_pred             Ccccc---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhhc---cCeEEEeC-----
Confidence            99977   677888899999999999999865443222111222222122 4889999999863   68999885     


Q ss_pred             CCchHHHHHHhhhhc--cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeee
Q 019298          266 FRKPKVVERMKKYFD--ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYL  341 (343)
Q Consensus       266 ~~~~~~~~~l~~~~~--~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~  341 (343)
                         +++++.+.....  ...++....+.++..+++......-+.+++++++++.+.+.|+++ |+.+. . .+.++++
T Consensus       264 ---~~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~-~-~~~i~~l  335 (407)
T PRK07179        264 ---RELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSEL-GYNIR-S-ESQIIAL  335 (407)
T ss_pred             ---HHHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCC-C-CCCEEEE
Confidence               356666654422  122222223333223444332222237788999999999999988 77764 3 3455554

>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional

Probab=99.93  E-value=1.8e-23  Score=193.07  Aligned_cols=266  Identities=14%  Similarity=0.065  Sum_probs=185.9

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCC-------CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-------NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT  106 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~  106 (343)
                      ....|||.--.    -.-++++++.+++.+.......       ..+.......++|+.+|++++        .++++++
T Consensus        17 ~~~~~~~~~~~----~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g--------~~~~~~~   84 (387)
T PRK09331         17 EEEFINLDPIQ----RGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLG--------MDEARVT   84 (387)
T ss_pred             cccccccChhh----cCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhC--------CCcEEEe
Confidence            45567765433    1246788999999888743110       011112246889999999983        3578899


Q ss_pred             cChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-------CceEEEE
Q 019298          107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-------NTVALVI  179 (343)
Q Consensus       107 ~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-------~~~~i~~  179 (343)
                      +|+++++..++.+++++||+|+++.++|......++..|++++.++...+.++.+|++++++.++.       +++++++
T Consensus        85 ~g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l  164 (387)
T PRK09331         85 HGAREGKFAVMHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALL  164 (387)
T ss_pred             CCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEE
Confidence            999999999999999999999999999988777788899999999874335677999999998853       5789999


Q ss_pred             eCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298          180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT  259 (343)
Q Consensus       180 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~  259 (343)
                      ++|+|+||..   .++++|+++|+++|+++|+|++|+....    +.....+   +..++++|++|++++ +.++||+++
T Consensus       165 ~~~~~~tG~~---~~l~~I~~la~~~g~~livD~a~~~g~~----~~~~~~~---g~D~~~~s~~K~l~~-~~~~G~l~~  233 (387)
T PRK09331        165 THVDGNYGNL---ADAKKVAKVAHEYGIPFLLNGAYTVGRM----PVDGKKL---GADFIVGSGHKSMAA-SAPSGVLAT  233 (387)
T ss_pred             ECCCCCCccc---ccHHHHHHHHHHcCCEEEEECCcccCCc----CCCHHHc---CCCEEEeeCcccccC-CCCEEEEEE
Confidence            9999999988   6688899999999999999999986221    1111222   234889999999764 458999988


Q ss_pred             eCCCCCCCchHHHHHHhhhhc---------cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298          260 TDPCGMFRKPKVVERMKKYFD---------ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN  330 (343)
Q Consensus       260 ~~~~~~~~~~~~~~~l~~~~~---------~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~  330 (343)
                      +        +++++.++....         .....+.....++ .+.+....+.++.+++..++.+.+.+.|++++|+++
T Consensus       234 ~--------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~~  304 (387)
T PRK09331        234 T--------EEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTL-MASFPHVVERVKRWDEEVKKARWFVDELEKIEGFKQ  304 (387)
T ss_pred             C--------HHHHhhcccccCCCcccceeeeceecCchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence            5        356666544311         0111111111111 122222123333455566777788999999989886


Q ss_pred             e
Q 019298          331 F  331 (343)
Q Consensus       331 ~  331 (343)
                      .
T Consensus       305 ~  305 (387)
T PRK09331        305 L  305 (387)
T ss_pred             e
Confidence            5

>PLN02242 methionine gamma-lyase

Probab=99.93  E-value=2.6e-24  Score=199.10  Aligned_cols=219  Identities=16%  Similarity=0.110  Sum_probs=165.8

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH-----HhcCceeEEe
Q 019298           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA-----AFRHIEVRHF  151 (343)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~-----~~~g~~~~~~  151 (343)
                      +...+|++.+|+++        ..+.+++++|+++++..++.+++++||.|+++.|.|+.+...+     +..|.+++.+
T Consensus        76 Pt~~~LE~~lA~l~--------g~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~  147 (418)
T PLN02242         76 PTVLNLGRQMAALE--------GTEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFV  147 (418)
T ss_pred             hhHHHHHHHHHHHh--------CCCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEc
Confidence            45688999999998        3467889999999999999999999999999999998876654     3367676655


Q ss_pred             ecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccc
Q 019298          152 DLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV  230 (343)
Q Consensus       152 ~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~  230 (343)
                      +.       .|++++++++++ ++++|++++|+||||.+.   ++++|+++|+++|+++|+|++|..+.+...      .
T Consensus       148 d~-------~d~e~l~~~i~~~~tklV~lesp~NPtG~v~---dl~~I~~la~~~gi~livDea~~~~~~~~~------~  211 (418)
T PLN02242        148 DI-------TDLEAVKKAVVPGKTKVLYFESISNPTLTVA---DIPELARIAHEKGVTVVVDNTFAPMVLSPA------R  211 (418)
T ss_pred             CC-------CCHHHHHHhcCcCCCEEEEEecCCCCCCccc---CHHHHHHHHHHhCCEEEEECCCCccCCCHH------H
Confidence            43       278999999987 499999999999999995   678889999999999999999987654211      1


Q ss_pred             cCCCCCEEEEccCccccCCCCCcE-EEEEEeCCCCCCCchHHHHHHhhhhc---cccCcchHHHHHHHhccchhhHHHHH
Q 019298          231 FGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYFD---ILGDPATFIQVCIMYGCLSTIMQIMI  306 (343)
Q Consensus       231 ~~~~~~~i~~~S~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~~l~~~~~~l~  306 (343)
                      +   +..++++|+||.++++|.++ ||++++        ++++++++....   ...+.+...|.+. ..++.. ..+..
T Consensus       212 ~---g~divv~S~SK~l~g~g~~~gG~iv~~--------~~li~~l~~~~~~~~~~~g~~~~~~~A~-l~~~~l-~tl~~  278 (418)
T PLN02242        212 L---GADVVVHSISKFISGGADIIAGAVCGP--------AELVNSMMDLHHGALMLLGPTMNPKVAF-ELSERL-PHLSL  278 (418)
T ss_pred             c---CCcEEEEeCccccCCCCCceEEEEEcC--------HHHHHHHHHHhhhhhhccCCCCCHHHHH-HHHcCC-CcHHH
Confidence            1   24599999999999999884 888864        367777776532   1233344444444 222221 22223


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298          307 HGNFLENFAGSCVPSYKLIPELINFKS  333 (343)
Q Consensus       307 ~~~~~~~~~~~~~~~L~~~~g~~~~~~  333 (343)
                      ++++++++++.+.+.|+++ ++.+..|
T Consensus       279 r~~~~~~~a~~la~~L~~~-~~~V~yP  304 (418)
T PLN02242        279 RMKEHCRRAMEYAKRMKEL-GLKVIYP  304 (418)
T ss_pred             HHHHHHHHHHHHHHHHHhC-CCEEECC
Confidence            7778999999999999998 5676555

>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)

Probab=99.93  E-value=1.3e-23  Score=191.91  Aligned_cols=271  Identities=17%  Similarity=0.113  Sum_probs=182.8

Q ss_pred             ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCC----CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--FNGYAP----TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~----~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~  109 (343)
                      .+++|+..+   +.+...+|++.+++++++++..  ..+|..    .....++++.+++++    +  .  ++.++++++
T Consensus         2 ~~~~~~~~~---~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~--~--~~~iv~~sg   70 (349)
T cd06454           2 KVLNFCSND---YLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFH----G--K--EAALVFSSG   70 (349)
T ss_pred             CceecccCC---ccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHh----C--C--CCEEEeccH
Confidence            457787776   3445567999999999997521  112322    223356666666666    2  1  234555566


Q ss_pred             HHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-----CceEEEEeCCCC
Q 019298          110 TQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-----NTVALVIINPGN  184 (343)
Q Consensus       110 ~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-----~~~~i~~~~p~n  184 (343)
                      ++++..++++++++||.|++++|+|..+...+...|.+++.++.       +|.+.+++.+++     +++++++++++|
T Consensus        71 ~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~le~~i~~~~~~~~~~~v~~~~~~~  143 (349)
T cd06454          71 YAANDGVLSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKH-------NDMEDLEKLLREARRPYGKKLIVTEGVYS  143 (349)
T ss_pred             HHHHHHHHHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHHhhccCCCeEEEEecccc
Confidence            77888888888899999999999999988888888988877642       467788877753     456777889999


Q ss_pred             CcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCC-CCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCC
Q 019298          185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP-FVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPC  263 (343)
Q Consensus       185 ptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~-~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~  263 (343)
                      |||...   ++++|+++|+++|+++|+|++|+...++... ..........+.+++++|+||.|+++|   ||++++   
T Consensus       144 ~tG~~~---~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~---  214 (349)
T cd06454         144 MDGDIA---PLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGS---  214 (349)
T ss_pred             CCCCcc---CHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECC---
Confidence            999984   5788889999999999999999753332111 100111123456799999999998766   888874   


Q ss_pred             CCCCchHHHHHHhhhhc-c--ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEee
Q 019298          264 GMFRKPKVVERMKKYFD-I--LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKY  340 (343)
Q Consensus       264 ~~~~~~~~~~~l~~~~~-~--~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~  340 (343)
                           +++.+.++.... .  ....++....++ .+.+....+..+.+++++++++.+.+.|.++ |+.+..+.++.+.+
T Consensus       215 -----~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~  287 (349)
T cd06454         215 -----KELIDYLRSYARGFIFSTSLPPAVAAAA-LAALEVLQGGPERRERLQENVRYLRRGLKEL-GFPVGGSPSHIIPP  287 (349)
T ss_pred             -----HHHHHHHHHhchhhhccCCCCHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc-CCcccCCCCCcEEE
Confidence                 356666654422 1  223455545454 4444432222337888899999999999887 77754554555444

The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.

>PLN02483 serine palmitoyltransferase

Probab=99.93  E-value=1.3e-23  Score=198.31  Aligned_cols=274  Identities=12%  Similarity=0.106  Sum_probs=185.5

Q ss_pred             cccceeEeccCCCCCCCCCC-CcH----HHHHHHHHHHhc--CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTH----VATEAVAEALLS--EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV  105 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~----~~~~~~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~  105 (343)
                      ...+.+||+..+   |.++. .++    .+.+++++.-..  +.-..|+...+..++++.+|++++       .++.+++
T Consensus        98 ~~~~~~n~~s~~---YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-------~~~ai~~  167 (489)
T PLN02483         98 KTRRCLNLGSYN---YLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-------KPAAIVF  167 (489)
T ss_pred             CCceEEEeecCC---ccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-------CCcEEEE
Confidence            467788888877   33444 233    444444443211  122247777788999999999994       3567777


Q ss_pred             ecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc-------CC-----
Q 019298          106 TSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-------QN-----  173 (343)
Q Consensus       106 ~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-------~~-----  173 (343)
                      ++| ..+...++.+++++||.|++++|+|.++...++..|++++.++..       |.+.+++.++       ++     
T Consensus       168 ~~G-~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~  239 (489)
T PLN02483        168 GMG-YATNSTIIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPW  239 (489)
T ss_pred             CCH-HHHHHHHHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhhhhccccccccCC
Confidence            666 455557778889999999999999999999999999999988753       3455544432       11     


Q ss_pred             ceEEEEeCC-CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCC--CCCCcccccCCCCCEEEEccCccccCCC
Q 019298          174 TVALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD--KPFVPMGVFGSTVPILTLGSLSKRWIVP  250 (343)
Q Consensus       174 ~~~i~~~~p-~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~--~~~~~~~~~~~~~~~i~~~S~sK~~~~~  250 (343)
                      .++++++.+ .|++|..   .++++|+++|++||+++|+||+|+....+.  .........+..+.+|+++||||+|++.
T Consensus       240 ~k~livve~v~s~~G~~---~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~  316 (489)
T PLN02483        240 KKIIVIVEGIYSMEGEL---CKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSC  316 (489)
T ss_pred             ceEEEEECCCCCCCCcc---cCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccC
Confidence            255666655 6999999   578888999999999999999998544332  2222222233345679999999999988


Q ss_pred             CCcEEEEEEeCCCCCCCchHHHHHHhhhhc---cc-cCcchHHHHHHHhccch----h--hHHHHHHHHHHHHHHHHHHH
Q 019298          251 GWRLGWFVTTDPCGMFRKPKVVERMKKYFD---IL-GDPATFIQVCIMYGCLS----T--IMQIMIHGNFLENFAGSCVP  320 (343)
Q Consensus       251 G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~---~~-~~~~~~~~~a~~~~~l~----~--~~~~l~~~~~~~~~~~~~~~  320 (343)
                      |   ||++++        +++++.++....   .. ..+++..+.+.  ++|.    +  .....+.+++++++++.+.+
T Consensus       317 G---G~i~~~--------~~li~~l~~~~~~~~~~~~~~p~~~~~~~--aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~  383 (489)
T PLN02483        317 G---GYIAGS--------KELIQYLKRTCPAHLYATSMSPPAVQQVI--SAIKVILGEDGTNRGAQKLAQIRENSNFFRS  383 (489)
T ss_pred             c---eEEEcC--------HHHHHHHHHhCccccccCCcCHHHHHHHH--HHHHHHHhCccccchHHHHHHHHHHHHHHHH
Confidence            7   999874        478888886532   12 22333444332  3332    1  11223477889999999999


Q ss_pred             hhcCCCCceeeCCCCceEeee
Q 019298          321 SYKLIPELINFKSTGSSLKYL  341 (343)
Q Consensus       321 ~L~~~~g~~~~~~~~g~~~~~  341 (343)
                      .|+++ |+.+..+.++..+|+
T Consensus       384 ~L~~~-G~~v~~~~~sp~~~l  403 (489)
T PLN02483        384 ELQKM-GFEVLGDNDSPVMPI  403 (489)
T ss_pred             HHHHC-CCcccCCCCCCEEEE
Confidence            99998 787655555555443

>TIGR01979 sufS cysteine desulfurases, SufS subfamily

Probab=99.92  E-value=1.4e-22  Score=188.62  Aligned_cols=267  Identities=17%  Similarity=0.202  Sum_probs=187.0

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCC----CCCC----CCCCHHHHHHHHHHHhhhCCCCCC-CCcEE
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN----GYAP----TAGLPLTRRAIAEYLSRDLPYKLT-PNDVF  104 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~Y~~----~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~  104 (343)
                      +.+++.|+.+..     .++++.+.+++.+.+.....+    .+..    ....+++|+.+++++      +.+ +++|+
T Consensus        16 ~~~~~yld~~~~-----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~------~~~~~~~v~   84 (403)
T TIGR01979        16 GKPLVYLDSAAT-----SQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFI------NAASDEEIV   84 (403)
T ss_pred             CCceEEEeCccc-----cCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHh------CcCCCCeEE
Confidence            557899999983     246788888888776532110    0100    113458889999988      345 67999


Q ss_pred             EecChHHHHHHHHHHh----cCCCCeEEEeCCCCcch----HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceE
Q 019298          105 VTSGCTQAIDVAMALL----SRPGANILLPRPGFPIY----ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA  176 (343)
Q Consensus       105 ~~~g~~~al~~~~~~l----~~~gd~vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~  176 (343)
                      +|+|+++++..++.++    .++||+|+++++.|++.    ...+...|.+++.++.+  .++.+|++++++.+++++++
T Consensus        85 ~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~i~~~~~l  162 (403)
T TIGR01979        85 FTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLD--DDGTLDLDDLEKLLTEKTKL  162 (403)
T ss_pred             EeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC--CCCCCCHHHHHHHhccCCeE
Confidence            9999999999998875    57899999999988653    34556779999998876  34568999999999889999


Q ss_pred             EEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEE
Q 019298          177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW  256 (343)
Q Consensus       177 i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~  256 (343)
                      +++++|+||||..++   +++|+++|+++|+++|+|++|+...    .+..+.   ..+..+++.|++|.+|.+|  +|+
T Consensus       163 v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~----~~~~~~---~~~~d~~~~s~~K~~gp~G--~g~  230 (403)
T TIGR01979       163 VAITHVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPH----MPVDVQ---ALDCDFYVFSGHKMYGPTG--IGV  230 (403)
T ss_pred             EEEEcccccccccCC---HHHHHHHHHHcCCEEEEEchhhcCc----cccCcc---ccCCCEEEEecccccCCCC--ceE
Confidence            999999999999976   6778888999999999999997532    111222   2234599999999987676  888


Q ss_pred             EEEeCCCCCCCchHHHHHHhhhh---------------------cc-ccCcchHHHHHHHhccchhhHH--HHHHHHHHH
Q 019298          257 FVTTDPCGMFRKPKVVERMKKYF---------------------DI-LGDPATFIQVCIMYGCLSTIMQ--IMIHGNFLE  312 (343)
Q Consensus       257 i~~~~~~~~~~~~~~~~~l~~~~---------------------~~-~~~~~~~~~~a~~~~~l~~~~~--~l~~~~~~~  312 (343)
                      ++++.        ++++++....                     .. .+.++.....++ ..+++...+  .-+.+++..
T Consensus       231 l~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al-~~al~~~~~~g~~~~~~~~~  301 (403)
T TIGR01979       231 LYGKE--------ELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGL-GAAIDYLEAIGLENIEAHEH  301 (403)
T ss_pred             EEEch--------HHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHH-HHHHHHHHHhCHHHHHHHHH
Confidence            88753        3444432110                     00 112333333333 333322122  112678888


Q ss_pred             HHHHHHHHhhcCCCCceeeCCC
Q 019298          313 NFAGSCVPSYKLIPELINFKST  334 (343)
Q Consensus       313 ~~~~~~~~~L~~~~g~~~~~~~  334 (343)
                      +.++.+.+.|+.++|+++..|.
T Consensus       302 ~l~~~l~~~l~~~~g~~~~~~~  323 (403)
T TIGR01979       302 ELTAYALERLGEIPGLRIYGPR  323 (403)
T ss_pred             HHHHHHHHHHhcCCCEEEeCCC
Confidence            8899999999888888876554

This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.

>PRK06234 methionine gamma-lyase; Provisional

Probab=99.92  E-value=1.9e-23  Score=193.06  Aligned_cols=221  Identities=15%  Similarity=0.134  Sum_probs=165.0

Q ss_pred             CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH----HHhcCceeEE
Q 019298           75 PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRH  150 (343)
Q Consensus        75 ~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~  150 (343)
                      +..+..+|+++++++++        .+++++++|+++++..++.+++++||+|+++.|.|+.+...    +...|.+++.
T Consensus        62 ~~p~~~~Le~~iA~~~g--------~~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~  133 (400)
T PRK06234         62 GNPTSTEVENKLALLEG--------GEAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTF  133 (400)
T ss_pred             CCccHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEE
Confidence            44678999999999983        35678899999999999999999999999999999765543    4667888888


Q ss_pred             eecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhc--CcEEEEccCCCccccCCCCCCcc
Q 019298          151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL--KTLVIADEVYGHLVFGDKPFVPM  228 (343)
Q Consensus       151 ~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~--~~~~i~D~ay~~~~~~~~~~~~~  228 (343)
                      ++.       .|++++++++++++++|++++|+||||.+.+   +++|+++|+++  |+++|+|++|....+..    ++
T Consensus       134 vd~-------~d~e~l~~~i~~~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~~----~l  199 (400)
T PRK06234        134 VDT-------SNLEEVRNALKANTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQR----PL  199 (400)
T ss_pred             ECC-------CCHHHHHHHhccCCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcCC----ch
Confidence            754       2789999999888999999999999999965   67777888886  99999999998765431    11


Q ss_pred             cccCCCCCEEEEccCccccCCCCCcE-EEEEEeCCCCCCCchHHHHHHhhh--hc-cccCcchHHHHHHHhccchhhHHH
Q 019298          229 GVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKY--FD-ILGDPATFIQVCIMYGCLSTIMQI  304 (343)
Q Consensus       229 ~~~~~~~~~i~~~S~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~l~~~--~~-~~~~~~~~~~~a~~~~~l~~~~~~  304 (343)
                       .   .+..++++|+||.++++|+++ ||++++        ++++++++..  .. .....++.....+ ...|+.   +
T Consensus       200 -~---~g~Divv~S~sK~l~g~g~~~gG~v~~~--------~~~~~~l~~~~~~~~~g~~l~p~~a~l~-~~~l~t---l  263 (400)
T PRK06234        200 -Q---LGADVVVHSATKYLNGHGDVIAGFVVGK--------EEFINQVKLFGIKDMTGSVIGPFEAFLI-IRGMKT---L  263 (400)
T ss_pred             -h---hCCcEEEeeccccccCCCCceeEEEEec--------HHHHHHHHHHHHHHhcCCCCCHHHHHHH-HhccCc---H
Confidence             1   134599999999999999876 888874        3577777643  22 2345566555544 333332   2


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          305 MIHGNFLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       305 l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      -.+.++..++...+.+.|+.+|.+. ++.|
T Consensus       264 ~~r~~~~~~na~~~a~~L~~~~~V~~V~~p  293 (400)
T PRK06234        264 QIRMEKHCKNAMKVAKFLESHPAVEKVYYP  293 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCeeEEECC
Confidence            2255566678888888888876655 4444

>PRK03244 argD acetylornithine aminotransferase; Provisional

Probab=99.92  E-value=1.6e-23  Score=194.50  Aligned_cols=287  Identities=16%  Similarity=0.077  Sum_probs=189.7

Q ss_pred             cccceeEeccCCCCCCCCCCC-cHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298           33 NEKKVISLAMGDPTVHSCFHT-THVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~  109 (343)
                      ++++.+||..|.+..  .++. +|.+.+++++++++.  ....|+.+.+ .+|.+.+++++    +. ..++++++++|+
T Consensus        41 dg~~~lD~~s~~~~~--~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~-~~la~~l~~~~----~~-~~~~~v~~~~sg  112 (398)
T PRK03244         41 DGKEYLDLLGGIAVN--ALGHAHPAVVEAVTRQLATLGHVSNLFATEPQ-IALAERLVELL----GA-PEGGRVFFCNSG  112 (398)
T ss_pred             CCCEEEECCcCHhhc--cCCCCCHHHHHHHHHHHHhccCccCccCCHHH-HHHHHHHHHhC----CC-CCCCEEEEeCch
Confidence            478899999887552  3444 799999999998753  2234654322 44555555544    31 235799999999


Q ss_pred             HHHHHHHHHHhcCCC-CeEEEeCCCCcchHHHHHhc-CceeEEeec---CCCCCC--CCCHHHHHhhhcCCceEEEEeCC
Q 019298          110 TQAIDVAMALLSRPG-ANILLPRPGFPIYELSAAFR-HIEVRHFDL---LPDKGW--EVDLDDIESLADQNTVALVIINP  182 (343)
Q Consensus       110 ~~al~~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~-g~~~~~~~~---~~~~~~--~~d~~~l~~~~~~~~~~i~~~~p  182 (343)
                      ++++..+++.+..+| +.|+..+++|+++...+... |........   ......  ..|++.+++.+.+++++++++.+
T Consensus       113 sea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aviiep~  192 (398)
T PRK03244        113 AEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVDDDTAAVFLEPI  192 (398)
T ss_pred             HHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhcCCeEEEEEecc
Confidence            999999999776565 57777788998775544432 211111000   000000  03789999988777888888888


Q ss_pred             CCCcccccCHHH-HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298          183 GNPCGNVYSYQH-LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (343)
Q Consensus       183 ~nptG~~~~~~~-l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~  261 (343)
                      +||+|.+++.++ +++|.++|++||+++|+||+|.++...+... .+...+..+++   .+|||+++ +|+|+||+++++
T Consensus       193 ~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~~~~~~~~pDi---~t~sK~l~-~G~~ig~~~~~~  267 (398)
T PRK03244        193 QGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWF-AHQHDGVTPDV---VTLAKGLG-GGLPIGACLAFG  267 (398)
T ss_pred             cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHH-hhhhhCCCCCE---EEEchhhh-CCcccEEEEEcH
Confidence            999999986654 9999999999999999999999876555321 11111212232   37899987 899999999963


Q ss_pred             CCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce-e-eCCCCceE
Q 019298          262 PCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI-N-FKSTGSSL  338 (343)
Q Consensus       262 ~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~-~~~~~g~~  338 (343)
                              ++++.+... ...+++.+++.+.++ .+.|+... -.+..++++++++.+.+.|+++ ++. + .....|++
T Consensus       268 --------~~~~~~~~~~~~~t~~~~~~~~aaa-~a~l~~~~-~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~v~g~g~~  336 (398)
T PRK03244        268 --------PAADLLTPGLHGSTFGGNPVACAAA-LAVLDTIA-SEGLLENAERLGEQLRAGIEAL-GHPLVDHVRGRGLL  336 (398)
T ss_pred             --------HHHhhccCCCCcCCCCCCHHHHHHH-HHHHHHHH-hccHHHHHHHHHHHHHHHHHhc-CCCceeeEeeccEE
Confidence                    577766543 233557788888888 44433111 0126677888888888888875 332 1 12236888


Q ss_pred             eeecC
Q 019298          339 KYLDL  343 (343)
Q Consensus       339 ~~~~l  343 (343)
                      +|+.+
T Consensus       337 ~~i~~  341 (398)
T PRK03244        337 LGIVL  341 (398)
T ss_pred             EEEEE
Confidence            88753

>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed

Probab=99.92  E-value=7.5e-23  Score=188.80  Aligned_cols=226  Identities=18%  Similarity=0.220  Sum_probs=163.1

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH----HHhcC
Q 019298           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRH  145 (343)
Q Consensus        70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g  145 (343)
                      +.+|+. +....|++.+|++++        .+..+++++++.++..++.+++++||+|+++.|.|+.+...    +...|
T Consensus        59 y~r~~~-p~~~~Le~~lA~l~G--------~~~~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G  129 (398)
T PRK07504         59 YSRYSN-PTVDMFEKRMCALEG--------AEDARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYG  129 (398)
T ss_pred             eecCCC-chHHHHHHHHHHHhC--------CCeeeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcC
Confidence            445654 356899999999983        33445677888999888888889999999999999875443    34567


Q ss_pred             ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (343)
Q Consensus       146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~  225 (343)
                      .++..++       .+|++++++++++++++|++++|+||||.+.+   +++|.++|+++|+++|+|++|....+..   
T Consensus       130 ~~v~~vd-------~~d~e~l~~ai~~~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~~~---  196 (398)
T PRK07504        130 IESTLVD-------GLDLDNWEKAVRPNTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPLFQK---  196 (398)
T ss_pred             eEEEEEC-------CCCHHHHHHhcCcCceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccccCC---
Confidence            7777763       26899999999889999999999999999976   6777888889999999999998654321   


Q ss_pred             CcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH-HHHhhh-hccccCcchHHHHHHHhccchhhHH
Q 019298          226 VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV-ERMKKY-FDILGDPATFIQVCIMYGCLSTIMQ  303 (343)
Q Consensus       226 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~-~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~  303 (343)
                       +. .+   +..+++.|+||.|+++|+++|++++.++       +.+ +.++.. .......+++..+.+ ...|   ..
T Consensus       197 -~~-~~---gaDivv~S~sK~l~g~g~~~GG~vv~~~-------~~i~~~~~~~~~~~g~~~s~~~A~~~-l~~L---~t  260 (398)
T PRK07504        197 -PL-EL---GAHIVVYSATKHIDGQGRCLGGVVLSDK-------AWIEEHLQDYFRHTGPSLSPFNAWTL-LKGL---ET  260 (398)
T ss_pred             -ch-hh---CCCEEEeeccccccCCccceEEEEEeCc-------HHHHHHHHHHHHHhCCCCCHHHHHHH-Hhcc---ch
Confidence             11 11   3348999999999999999976555432       333 344433 222334555555554 3333   33


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          304 IMIHGNFLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       304 ~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      +..+.++..++...+.+.|+++|++. ++.|
T Consensus       261 l~~R~~~~~~na~~la~~L~~~p~v~~v~yp  291 (398)
T PRK07504        261 LPVRVRQQTESAAAIADFLAGHPKVARVIYP  291 (398)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCccEEECC
Confidence            44466677788888899999887765 4444

>PRK01278 argD acetylornithine transaminase protein; Provisional

Probab=99.92  E-value=7.9e-23  Score=189.22  Aligned_cols=245  Identities=18%  Similarity=0.129  Sum_probs=166.7

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      +++.++||..|.-..+.++ .+|.+.+++++++.....  .+. ....+....+++.+.+..    ..+++++++|++++
T Consensus        29 dG~~~lD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~--~~~-~~~~~~~~~la~~l~~~~----~~~~v~~~~sGseA  100 (389)
T PRK01278         29 DGERYLDFASGIAVNSLGH-AHPHLVEALKEQAEKLWH--VSN-LYRIPEQERLAERLVENS----FADKVFFTNSGAEA  100 (389)
T ss_pred             CCCEEEECCccHhhccCCC-CCHHHHHHHHHHHHhcCc--ccc-ccCChHHHHHHHHHHhhC----CCCEEEEcCCcHHH
Confidence            3788999988764332223 789999999999875211  111 112233344445443311    34799999999999


Q ss_pred             HHHHHHHh----cCCCC----eEEEeCCCCcchHHHHHhcCceeEEeec-CC-CCCCC----CCHHHHHhhhcCCceEEE
Q 019298          113 IDVAMALL----SRPGA----NILLPRPGFPIYELSAAFRHIEVRHFDL-LP-DKGWE----VDLDDIESLADQNTVALV  178 (343)
Q Consensus       113 l~~~~~~l----~~~gd----~vl~~~p~~~~~~~~~~~~g~~~~~~~~-~~-~~~~~----~d~~~l~~~~~~~~~~i~  178 (343)
                      +..+++.+    ..+||    +|++.+++|+++...+...+........ .+ ..++.    .|++.+++.+++++++|+
T Consensus       101 ~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~avi  180 (389)
T PRK01278        101 VECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNTAAIL  180 (389)
T ss_pred             HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCeEEEE
Confidence            99998876    34565    8999999999887666555433222110 00 11111    589999999987788888


Q ss_pred             EeCCCCCcc-cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEE
Q 019298          179 IINPGNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF  257 (343)
Q Consensus       179 ~~~p~nptG-~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i  257 (343)
                      ++.++||+| .+++.+.+++|.++|++||+++|+||+|.++.+.+... ......-...   +.|+||.++ +|+|+||+
T Consensus       181 vep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~-~~~~~~~~pd---i~t~sK~l~-~G~~ig~~  255 (389)
T PRK01278        181 IEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLF-AHEWAGVTPD---IMAVAKGIG-GGFPLGAC  255 (389)
T ss_pred             EecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcce-eecccCCCCC---EEEEehhcc-CCcceEEE
Confidence            886688998 78899999999999999999999999999876655421 1111111112   348999987 89999999


Q ss_pred             EEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccch
Q 019298          258 VTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLS  299 (343)
Q Consensus       258 ~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~  299 (343)
                      ++++        ++.+.+.... ..+.+.+++.++++ .+.|+
T Consensus       256 ~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa-~a~l~  289 (389)
T PRK01278        256 LATE--------EAAKGMTPGTHGSTYGGNPLAMAVG-NAVLD  289 (389)
T ss_pred             EEcH--------HHHhccCCCCCCCCCCccHHHHHHH-HHHHH
Confidence            9863        5666665443 23556788888887 45543

>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated

Probab=99.92  E-value=2.1e-22  Score=187.47  Aligned_cols=266  Identities=16%  Similarity=0.168  Sum_probs=185.5

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC--------CCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT--------AGLPLTRRAIAEYLSRDLPYKLTPNDVFVT  106 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~--------~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~  106 (343)
                      .+++.|+.+..     .+.++.+.+++.+.+.....+.....        .-..++|+.++++++.     .++++|++|
T Consensus        22 ~~~iYld~a~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~-----~~~~~v~~t   91 (406)
T PRK09295         22 LPLAYLDSAAS-----AQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINA-----RSAEELVFV   91 (406)
T ss_pred             CceEEEeCccc-----ccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCc-----CCCCeEEEe
Confidence            35789998872     35678888998887753211111100        1135788888888831     257899999


Q ss_pred             cChHHHHHHHHHHh----cCCCCeEEEeCCCCcc----hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEE
Q 019298          107 SGCTQAIDVAMALL----SRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALV  178 (343)
Q Consensus       107 ~g~~~al~~~~~~l----~~~gd~vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~  178 (343)
                      +|+++++..+++++    .++||+|+++++.|++    +...++..|.+++.++++.  ++.+|+++|++++++++++++
T Consensus        92 ~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv~  169 (406)
T PRK09295         92 RGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPALFDERTRLLA  169 (406)
T ss_pred             CCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCCCHHHHHHhcCCCcEEEE
Confidence            99999999998874    5789999999988864    4456677899999998753  456899999999988899999


Q ss_pred             EeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEE
Q 019298          179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV  258 (343)
Q Consensus       179 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~  258 (343)
                      +++|+||||.+++   +++|+++|+++|+++++|++|+...    .+..+..   .+..+++.|++|.+|.+|  +||++
T Consensus       170 l~~~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~----~~~~~~~---~~~D~~~~s~~K~~gp~G--~G~l~  237 (406)
T PRK09295        170 ITHVSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAVMH----HPVDVQA---LDCDFYVFSGHKLYGPTG--IGILY  237 (406)
T ss_pred             EecchhcccccCC---HHHHHHHHHHcCCEEEEEcccccCc----cccCchh---cCCCEEEeehhhccCCCC--cEEEE
Confidence            9999999999976   5778888899999999999997632    1122222   223488999999887776  79998


Q ss_pred             EeCCCCCCCchHHHHHHhhh-----------------------hccccCcchHHHHHHHhccchhhHH--HHHHHHHHHH
Q 019298          259 TTDPCGMFRKPKVVERMKKY-----------------------FDILGDPATFIQVCIMYGCLSTIMQ--IMIHGNFLEN  313 (343)
Q Consensus       259 ~~~~~~~~~~~~~~~~l~~~-----------------------~~~~~~~~~~~~~a~~~~~l~~~~~--~l~~~~~~~~  313 (343)
                      +++        ++++.+...                       +...+.++.....++ .++++...+  +-+.+++.++
T Consensus       238 ~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l-~~al~~~~~~g~~~i~~~~~~  308 (406)
T PRK09295        238 VKE--------ALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGL-GAALDYVSALGLNNIAEYEQN  308 (406)
T ss_pred             Ech--------HhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHH-HHHHHHHHHhCHHHHHHHHHH
Confidence            853        333332210                       001223444444444 444432111  1126677888


Q ss_pred             HHHHHHHhhcCCCCceeeCC
Q 019298          314 FAGSCVPSYKLIPELINFKS  333 (343)
Q Consensus       314 ~~~~~~~~L~~~~g~~~~~~  333 (343)
                      .++.+.+.|.+++|+.+..|
T Consensus       309 l~~~l~~~l~~~~~~~~~~~  328 (406)
T PRK09295        309 LMHYALSQLESVPDLTLYGP  328 (406)
T ss_pred             HHHHHHHHHhcCCCEEEeCC
Confidence            88999999988888886555

>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase

Probab=99.92  E-value=1.5e-22  Score=188.11  Aligned_cols=269  Identities=14%  Similarity=0.098  Sum_probs=182.8

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCC------CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN------GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g  108 (343)
                      ++.++|+..+   |.++..+|++++++.++++.-...      .|.......+|++.++++++        .+..+++++
T Consensus        45 ~~~~~~~sn~---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g--------~~~~l~~~s  113 (402)
T TIGR01821        45 KDVTVWCSND---YLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG--------KESALVFTS  113 (402)
T ss_pred             eeEEEeEccC---cCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC--------CCeEEEECc
Confidence            5678888887   567889999999999998752111      12222235678888888872        234566666


Q ss_pred             hHHHHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc---C-CceEEEEeCC
Q 019298          109 CTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD---Q-NTVALVIINP  182 (343)
Q Consensus       109 ~~~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~-~~~~i~~~~p  182 (343)
                      +++++..++..+..  +++.|+.....|......+...|.++..++.       .|.+++++.++   + ++++|++++|
T Consensus       114 G~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~e~~  186 (402)
T TIGR01821       114 GYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKIIAFESV  186 (402)
T ss_pred             hHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccCCCCeEEEEcCC
Confidence            68888888888764  6777777766777766677777777655432       25677776664   2 5678999999


Q ss_pred             CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298          183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (343)
Q Consensus       183 ~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~  261 (343)
                      +||+|.+.+   +++|.++|+++|+++|+||+|+...++..........+- ....++++||||+|++.|   ||++++ 
T Consensus       187 ~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~-  259 (402)
T TIGR01821       187 YSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAAS-  259 (402)
T ss_pred             CCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecC-
Confidence            999999965   788888899999999999999854443221111111111 123588899999999988   998874 


Q ss_pred             CCCCCCchHHHHHHhhhhc---cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCce
Q 019298          262 PCGMFRKPKVVERMKKYFD---ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSS  337 (343)
Q Consensus       262 ~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~  337 (343)
                             +++++.++....   .+...++..+.++ .++|+.....-+.++++.++++++.+.|+++ |+.+..+.+++
T Consensus       260 -------~~~~~~l~~~~~~~~~t~~~~~~~~aaa-~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~i  329 (402)
T TIGR01821       260 -------RKLIDAIRSYAPGFIFTTSLPPAIAAGA-TASIRHLKESQDLRRAHQENVKRLKNLLEAL-GIPVIPNPSHI  329 (402)
T ss_pred             -------HHHHHHHHHhCcCceecCcCCHHHHHHH-HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCE
Confidence                   367777765432   2334566666666 4555432222225666778889999999887 77765555443

This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.

>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase

Probab=99.92  E-value=8.6e-23  Score=187.27  Aligned_cols=226  Identities=18%  Similarity=0.180  Sum_probs=168.7

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh----cC
Q 019298           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----RH  145 (343)
Q Consensus        70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~----~g  145 (343)
                      +.+|+. .....|++.++++.+        .+++++++|++++|..++.+++++||+|+++.|+|......+..    .+
T Consensus        45 Y~R~~~-p~~~~le~~lA~l~g--------~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~  115 (382)
T TIGR02080        45 YSRSGN-PTRDLLQQALAELEG--------GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGC  115 (382)
T ss_pred             ccCCCC-chHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcC
Confidence            567765 356889999999882        47899999999999999999999999999999999865443322    23


Q ss_pred             ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (343)
Q Consensus       146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~  225 (343)
                      .++..++       ..|++.+++++++++++|++++|+||||.+++   +++|+++|+++|+++|+|++|..+....   
T Consensus       116 ~~v~~~d-------~~d~~~l~~ai~~~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~~---  182 (382)
T TIGR02080       116 FRVLFVD-------QGDEQALRAALAQKPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQN---  182 (382)
T ss_pred             eEEEEEC-------CCCHHHHHHhcCcCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccCC---
Confidence            4444432       13789999999888999999999999999976   5677888889999999999998654221   


Q ss_pred             CcccccCCCCCEEEEccCccccCC-CCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHH
Q 019298          226 VPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQ  303 (343)
Q Consensus       226 ~~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~  303 (343)
                       ++. +.   ..++++|+||.++. ++++.|++++.+       ++++++++..... ....+++....+ ..-|   ..
T Consensus       183 -pl~-~g---aDivv~S~sK~l~G~~~~~~G~i~~~~-------~~~~~~l~~~~~~~g~~~sp~~a~l~-lr~l---~t  246 (382)
T TIGR02080       183 -PLA-LG---ADLVLHSCTKYLNGHSDVIAGAVIAKD-------PQVAEELAWWANNLGVTGGAFDSYLT-LRGL---RT  246 (382)
T ss_pred             -chh-hC---CCEEEeecceeccCCCCceeEEEEeCC-------HHHHHHHHHHHHccCCCCCHHHHHHH-Hccc---ch
Confidence             111 11   23899999999875 678999988754       4677777766543 446677766555 2222   33


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          304 IMIHGNFLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       304 ~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      +..+.++..++...+.+.|+.+|.+. |+.|
T Consensus       247 l~~R~~~~~~na~~~a~~L~~~p~v~~V~yP  277 (382)
T TIGR02080       247 LVARMRLQQRNAQAIVEYLQTQPLVKKIYYP  277 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCeeEEECC
Confidence            34467788889999999999887766 5554

This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.

>PRK08133 O-succinylhomoserine sulfhydrylase; Validated

Probab=99.92  E-value=1.3e-22  Score=186.85  Aligned_cols=219  Identities=18%  Similarity=0.171  Sum_probs=163.2

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH----HHHhcCceeEEeec
Q 019298           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFDL  153 (343)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~~  153 (343)
                      -..+|++.+++++        ..+++++++|+++++..++.+++++||+|+++.+.|.....    .+...|.+++.++.
T Consensus        62 ~~~~le~~la~l~--------g~~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~  133 (390)
T PRK08133         62 TVTMFQERLAALE--------GAEACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDL  133 (390)
T ss_pred             HHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECC
Confidence            4578899999988        34678999999999999999999999999999999976543    45567888888865


Q ss_pred             CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (343)
Q Consensus       154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~  233 (343)
                      .       |.+++++++++++++|++++|+||||.+.   ++++|+++|+++|+++|+|++|.......    ++ ..  
T Consensus       134 ~-------d~~~l~~~i~~~tklV~ie~p~NptG~v~---dl~~I~~la~~~gi~livD~t~~~~~~~~----pl-~~--  196 (390)
T PRK08133        134 T-------DLDAWRAAVRPNTKLFFLETPSNPLTELA---DIAALAEIAHAAGALLVVDNCFCTPALQQ----PL-KL--  196 (390)
T ss_pred             C-------CHHHHHHhcCcCCeEEEEECCCCCCCCcC---CHHHHHHHHHHcCCEEEEECCCcccccCC----ch-hh--
Confidence            2       68999999988999999999999999996   46888889999999999999997543221    11 11  


Q ss_pred             CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHHHHHHHH
Q 019298          234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLE  312 (343)
Q Consensus       234 ~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~  312 (343)
                       +..++++|+||.++.+|.++|++++.+       +++++++..... .....++..+.++    ++....+..+.++..
T Consensus       197 -g~Divv~S~sK~~~g~g~~~GG~vv~~-------~~~~~~~~~~~~~~g~~~~~~~a~~~----l~gl~tl~~R~~~~~  264 (390)
T PRK08133        197 -GADVVIHSATKYLDGQGRVLGGAVVGS-------KELMEEVFGFLRTAGPTLSPFNAWVF----LKGLETLSLRMEAHS  264 (390)
T ss_pred             -CCcEEEeecceeecCCcceEeEEEEcC-------HHHHHHHHHHHHHhCCCCCHHHHHHH----HcccchHHHHHHHHH
Confidence             224889999999999999986555433       245565554432 2334555554444    222133344667777


Q ss_pred             HHHHHHHHhhcCCCCce-eeCC
Q 019298          313 NFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       313 ~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      +++..+.+.|++.|++. ++.|
T Consensus       265 ~~a~~la~~L~~~p~v~~v~yp  286 (390)
T PRK08133        265 ANALALAEWLEAHPGVERVFYP  286 (390)
T ss_pred             HHHHHHHHHHHhCCCeeEEECC
Confidence            88999999999988876 4444

>PRK08249 cystathionine gamma-synthase; Provisional

Probab=99.91  E-value=1.6e-22  Score=186.31  Aligned_cols=220  Identities=15%  Similarity=0.151  Sum_probs=164.5

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH----HHHhcCceeEEee
Q 019298           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFD  152 (343)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~  152 (343)
                      +...+|++.++++.+        .+..++++++++++..++.+++++||+|+++.|+|.+...    .+...|.++..++
T Consensus        64 p~~~~le~~lA~l~g--------~~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd  135 (398)
T PRK08249         64 PTVQAFEEKVRILEG--------AEAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCE  135 (398)
T ss_pred             hHHHHHHHHHHHHhC--------CCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcC
Confidence            456889999999983        3567777888999999999999999999999999987543    3455687776654


Q ss_pred             cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (343)
Q Consensus       153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~  232 (343)
                      .       .|++++++++++++++|++++|+||||.+++   +++|+++|+++|+++|+|++|+......    +.. . 
T Consensus       136 ~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~----~l~-~-  199 (398)
T PRK08249        136 T-------GDHEQIEAEIAKGCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQN----PLA-L-  199 (398)
T ss_pred             C-------CCHHHHHHhcCCCCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccCC----chh-h-
Confidence            2       5899999999888999999999999999976   6678888999999999999999654321    111 1 


Q ss_pred             CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHHHHHHH
Q 019298          233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGNFL  311 (343)
Q Consensus       233 ~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~  311 (343)
                        +..++++|+||.++.+|.++|++++.+       ++++++++..... ....++..+..+ ...+   ..+..+.++.
T Consensus       200 --~~Divv~S~sK~l~g~~~~~gG~vv~~-------~~l~~~l~~~~~~~g~~~s~~~a~l~-l~~l---~tL~~R~~~~  266 (398)
T PRK08249        200 --GADLVIHSATKFLSGHADALGGVVCGS-------KELMEQVYHYREINGATMDPMSAYLI-LRGM---KTLKLRVRQQ  266 (398)
T ss_pred             --CCCEEeccCceecCCCCCceEEEEECC-------HHHHHHHHHHHHhcCCCCCHHHHHHH-HhCc---chHHHHHHHH
Confidence              223888999999998888875544432       4677877766543 345666666655 3332   2333366777


Q ss_pred             HHHHHHHHHhhcCCCCce-eeCC
Q 019298          312 ENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       312 ~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      .+++..+.+.|+++|.+. ++.|
T Consensus       267 ~~na~~la~~L~~~p~v~~V~yP  289 (398)
T PRK08249        267 QESAMALAKYLQTHPKVEAVYYP  289 (398)
T ss_pred             HHHHHHHHHHHHcCCCeeEEECC
Confidence            888899999999887666 4444

>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits

Probab=99.91  E-value=2.2e-22  Score=187.06  Aligned_cols=264  Identities=18%  Similarity=0.177  Sum_probs=181.4

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-----CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP-----TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-----~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g  108 (343)
                      ..++++|++|.|.    ++.++.+.++..++  . ....|.+     ..|.+++++++++++.+.+|.  +.++++++++
T Consensus        19 ~~~~~~l~~g~~~----~~~p~~~~~~~~~~--~-~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~--~~~~v~~~~~   89 (398)
T cd00613          19 DQSMSFLGSGTYK----HNPPAVIKRNILEN--E-FYTAYTPYQPEISQGRLQALFELQTMLCELTGM--DVANASLQDE   89 (398)
T ss_pred             ccCcccccccccC----CcCcHHHHHHhccc--c-CcccCCCCChhhhhhHHHHHHHHHHHHHHHHCC--CccceeccCc
Confidence            4566999999954    66677777666655  2 2235665     678999999999999987764  4447766664


Q ss_pred             hH-HHHHHHHHHhcCC--CCeEEEeCCCCcchHHHHHhcC----ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeC
Q 019298          109 CT-QAIDVAMALLSRP--GANILLPRPGFPIYELSAAFRH----IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN  181 (343)
Q Consensus       109 ~~-~al~~~~~~l~~~--gd~vl~~~p~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~  181 (343)
                      ++ ++...+..++..+  ||+|++++|.|+.+...+...|    .+++.+++.  +++.+|++++++.+.++++++++++
T Consensus        90 g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~t~~viv~~  167 (398)
T cd00613          90 ATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSD--EGGTVDLEALKEEVSEEVAALMVQY  167 (398)
T ss_pred             hHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccC--CCCCcCHHHHHHhcCCCeEEEEEEC
Confidence            44 4544555555565  9999999999999988888777    888888764  3456899999999988899999998


Q ss_pred             CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCC----CCcEEEE
Q 019298          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP----GWRLGWF  257 (343)
Q Consensus       182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~----G~r~G~i  257 (343)
                      |+ |+|.+.  +.+++|+++|+++|+++|+|+++.......    ...   ..+..++++|++|.+ .+    |+++||+
T Consensus       168 ~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~~~~----~~~---~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l  236 (398)
T cd00613         168 PN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLTGLK----PPG---EYGADIVVGNLQKTG-VPHGGGGPGAGFF  236 (398)
T ss_pred             CC-CCceec--chHHHHHHHHHhcCCEEEEEeccccccCCC----ChH---HcCCCEEEeeccccC-CCCCCCCCceeEE
Confidence            85 899993  446999999999999999999876422110    111   113459999999997 55    7999999


Q ss_pred             EEeCCCCCCCchHHHHHHhhh------------------------------hc-cccCcchHHHHHHHhccchhhHHHH-
Q 019298          258 VTTDPCGMFRKPKVVERMKKY------------------------------FD-ILGDPATFIQVCIMYGCLSTIMQIM-  305 (343)
Q Consensus       258 ~~~~~~~~~~~~~~~~~l~~~------------------------------~~-~~~~~~~~~~~a~~~~~l~~~~~~l-  305 (343)
                      .+++        ++++.+...                              .. .....+...+.+. ..+.......+ 
T Consensus       237 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~-~~l~~~~~~g~~  307 (398)
T cd00613         237 AVKK--------ELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAA-MYIVYLGPEGLK  307 (398)
T ss_pred             EEhh--------hhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHH-HHHHHhCHHHHH
Confidence            9853        344432110                              00 1111122223333 22221112233 


Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCc
Q 019298          306 IHGNFLENFAGSCVPSYKLIPEL  328 (343)
Q Consensus       306 ~~~~~~~~~~~~~~~~L~~~~g~  328 (343)
                      +.+++++++++++.+.|+++++.
T Consensus       308 ~~~~~~~~~~~~l~~~L~~~~~~  330 (398)
T cd00613         308 EIAERAHLNANYLAKRLKEVGGV  330 (398)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCc
Confidence            37889999999999999887544

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

>PRK08776 cystathionine gamma-synthase; Provisional

Probab=99.91  E-value=1.4e-22  Score=186.91  Aligned_cols=225  Identities=17%  Similarity=0.192  Sum_probs=165.3

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcc----hHHHHHhcC
Q 019298           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI----YELSAAFRH  145 (343)
Q Consensus        70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~----~~~~~~~~g  145 (343)
                      +.+|+++ ....|++.++++.+       .++. ++++++++++..++.+++++||+|+++.|+|..    +...+...|
T Consensus        54 y~R~~~p-~~~~Le~~lA~l~g-------~~~~-v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g  124 (405)
T PRK08776         54 YTRSGNP-TRDLLGEALAELEG-------GAGG-VITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGH  124 (405)
T ss_pred             ccCCCCh-HHHHHHHHHHHHhC-------CCce-EEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcC
Confidence            3445542 35678888888762       2344 555556899999999999999999999999987    334455567


Q ss_pred             ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (343)
Q Consensus       146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~  225 (343)
                      .++..++.       .|++++++.++++++++++++|+||||.+   .++++|+++|+++|+++|+|++|.....    .
T Consensus       125 ~~v~~v~~-------~d~~~l~~~i~~~tklV~l~~P~NPtG~v---~dl~~I~~la~~~gi~vIvD~a~a~~~~----~  190 (405)
T PRK08776        125 FALITADL-------TDPRSLADALAQSPKLVLIETPSNPLLRI---TDLRFVIEAAHKVGALTVVDNTFLSPAL----Q  190 (405)
T ss_pred             cEEEEECC-------CCHHHHHHhcCcCCeEEEEECCCCCCCcc---CCHHHHHHHHHHcCCEEEEECCCccccc----C
Confidence            77777643       37899999988889999999999999999   5688899999999999999999985321    1


Q ss_pred             CcccccCCCCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHH
Q 019298          226 VPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQ  303 (343)
Q Consensus       226 ~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~  303 (343)
                      .++. +.   ..+++.|.+|.++.+| ...|++++++       +++.++++..... ....+++.+.++ ...    .+
T Consensus       191 ~pl~-~g---aDivv~S~tK~l~g~~~~~~G~vv~~~-------~~l~~~l~~~~~~~g~~~s~~~a~l~-~~g----l~  254 (405)
T PRK08776        191 KPLE-FG---ADLVLHSTTKYINGHSDVVGGAVVARD-------AELHQQLVWWANALGLTGSPFDAFLT-LRG----LR  254 (405)
T ss_pred             Cccc-cc---CCEEEecCceeecCCCCceEEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHH-Hhh----hC
Confidence            1221 22   2389999999998764 6788887754       3577777654332 335677766666 222    34


Q ss_pred             HHH-HHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          304 IMI-HGNFLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       304 ~l~-~~~~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      +++ +.++..++...+.+.|+.+|.+. +..|
T Consensus       255 tl~~r~~~~~~na~~la~~L~~~p~v~~V~yP  286 (405)
T PRK08776        255 TLDARLRVHQENADAIAALLDGHAAVNQVYYP  286 (405)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHcCCCeeEEECC
Confidence            555 78888899999999999888766 5554

>PRK08045 cystathionine gamma-synthase; Provisional

Probab=99.91  E-value=1.8e-22  Score=185.25  Aligned_cols=226  Identities=16%  Similarity=0.195  Sum_probs=168.6

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh----cC
Q 019298           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----RH  145 (343)
Q Consensus        70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~----~g  145 (343)
                      +.+|+.+ ....|++.+|++.+        .+.+++++|+++++..++.+++++||+|++++|+|+.....+..    .+
T Consensus        46 Y~R~~~p-t~~~L~~~lA~l~g--------~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~g  116 (386)
T PRK08045         46 YSRRGNP-TRDVVQRALAELEG--------GAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGC  116 (386)
T ss_pred             eeCCCCc-cHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCC
Confidence            5566663 56899999999983        34799999999999999999999999999999999864433222    23


Q ss_pred             ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (343)
Q Consensus       146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~  225 (343)
                      .++..++       ..|++++++.+++++++|++++|+||||.+++   +++|.++|+++|+++|+|++|......    
T Consensus       117 i~v~~vd-------~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~~----  182 (386)
T PRK08045        117 YRVLFVD-------QGDEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPALQ----  182 (386)
T ss_pred             eEEEEeC-------CCCHHHHHHhcccCCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccC----
Confidence            3454442       25789999999888999999999999999976   567777788999999999999874321    


Q ss_pred             CcccccCCCCCEEEEccCccccCC-CCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHH
Q 019298          226 VPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQ  303 (343)
Q Consensus       226 ~~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~  303 (343)
                      .++. +..   .++++|++|.++. .+.+.|++++.+       ++++++++.... .....+++.+..+ ...|+   .
T Consensus       183 ~pl~-~ga---Divv~S~tK~l~G~~d~~~G~vi~~~-------~~~~~~l~~~~~~~g~~~~p~~~~l~-~rgl~---t  247 (386)
T PRK08045        183 NPLA-LGA---DLVLHSCTKYLNGHSDVVAGVVIAKD-------PDVVTELAWWANNIGVTGGAFDSYLL-LRGLR---T  247 (386)
T ss_pred             Cchh-hCC---CEEEeecceeccCCCCceeEEEEeCc-------HHHHHHHHHHHHhcCCCCCHHHHHHH-Hhhhc---c
Confidence            1121 122   3899999999875 557889988753       457777765543 3456777777776 33332   2


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          304 IMIHGNFLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       304 ~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      +-.++++..+++..+.++|+.+|.+. |+.|
T Consensus       248 l~~R~~~~~~na~~la~~L~~~p~v~~V~yp  278 (386)
T PRK08045        248 LVPRMELAQRNAQAIVKYLQTQPLVKKLYHP  278 (386)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCEeEEECC
Confidence            23388889999999999999988776 5444

>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily

Probab=99.91  E-value=3e-22  Score=186.03  Aligned_cols=263  Identities=16%  Similarity=0.179  Sum_probs=180.4

Q ss_pred             eeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC---CCCCCCCCC----CHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298           37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSEK---FNGYAPTAG----LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (343)
Q Consensus        37 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Y~~~~g----~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~  109 (343)
                      .+.|+.+.+     .++++.+++++.+.+....   ...|....+    ..++|+.+++++      +.++++|++++|+
T Consensus        18 ~~yl~~~~~-----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~------~~~~~~v~~~~~~   86 (397)
T TIGR01976        18 RVFFDNPAG-----TQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLL------NADPPEVVFGANA   86 (397)
T ss_pred             eEEecCCcc-----CCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHc------CCCCCeEEEeCCH
Confidence            588888873     3577889999988875421   123544323    357788888877      3456689999999


Q ss_pred             HHHHHHHHHHh---cCCCCeEEEeCCCCcchH----HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCC
Q 019298          110 TQAIDVAMALL---SRPGANILLPRPGFPIYE----LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP  182 (343)
Q Consensus       110 ~~al~~~~~~l---~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p  182 (343)
                      ++++..++.++   .++||+|++.+|.|.+..    ..++..|.+++.++++++ ++.+|++++++.++++++++++++|
T Consensus        87 t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~l~~~i~~~~~lv~i~~~  165 (397)
T TIGR01976        87 TSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEA-TGELHPDDLASLLSPRTRLVAVTAA  165 (397)
T ss_pred             HHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecccc-CCCcCHHHHHHhcCCCceEEEEeCC
Confidence            99998877775   579999999999986643    456778999999887643 3578999999999888999999999


Q ss_pred             CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCC
Q 019298          183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP  262 (343)
Q Consensus       183 ~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~  262 (343)
                      +||||..++   +++|+++|+++|+++++|+++..    +.....+.   ..+..+++.|++|.|   |.|+|++++++ 
T Consensus       166 ~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~----~~~~~~~~---~~~~d~~~~s~~K~~---g~~~G~l~~~~-  231 (397)
T TIGR01976       166 SNTLGSIVD---LAAITELVHAAGALVVVDAVHYA----PHGLIDVQ---ATGADFLTCSAYKFF---GPHMGILWGRP-  231 (397)
T ss_pred             CCCCCccCC---HHHHHHHHHHcCCEEEEehhhhc----cccCCCHH---HcCCCEEEEechhhc---CCceEEEEEcH-
Confidence            999999964   78888889999999999999853    21111222   223347778999996   45689998853 


Q ss_pred             CCCCCchHHHHHHhhhhcc-----------ccCcchHHHHHHHhccchhhHH---------------HHH-HHHHHHHHH
Q 019298          263 CGMFRKPKVVERMKKYFDI-----------LGDPATFIQVCIMYGCLSTIMQ---------------IMI-HGNFLENFA  315 (343)
Q Consensus       263 ~~~~~~~~~~~~l~~~~~~-----------~~~~~~~~~~a~~~~~l~~~~~---------------~l~-~~~~~~~~~  315 (343)
                             ++++.+......           .+.++.....++ .+++....+               +++ .+++..+.+
T Consensus       232 -------~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l-~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~  303 (397)
T TIGR01976       232 -------ELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGV-VAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLA  303 (397)
T ss_pred             -------HHHhhCCCccccCccCCCcchhcCCCCCHHHHHHH-HHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHH
Confidence                   566555433210           111222222122 222221111               122 566677788


Q ss_pred             HHHHHhhcCCCCceeeCC
Q 019298          316 GSCVPSYKLIPELINFKS  333 (343)
Q Consensus       316 ~~~~~~L~~~~g~~~~~~  333 (343)
                      +.+.+.|++++++.+..+
T Consensus       304 ~~l~~~L~~~~~~~~~~~  321 (397)
T TIGR01976       304 EYLLVGLSDLPGVTLYGV  321 (397)
T ss_pred             HHHHHHHhcCCCEEEeCC
Confidence            888899988877886554

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.

>PRK09064 5-aminolevulinate synthase; Validated

Probab=99.91  E-value=2.5e-22  Score=187.04  Aligned_cols=273  Identities=15%  Similarity=0.115  Sum_probs=180.9

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF------NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~  107 (343)
                      +++.++|+..+   |.+++.+|.+.+++.+++.....      ..|.+.....+|++.+++++.       .++.+++++
T Consensus        45 ~~~~~~~~s~d---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g-------~~~~~~~~s  114 (407)
T PRK09064         45 EREVTVWCSND---YLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHG-------KEAALVFTS  114 (407)
T ss_pred             CceEEEEECCC---CcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhC-------CCcEEEECc
Confidence            35678998887   45688899999999998865311      113333345678888888772       244555555


Q ss_pred             ChHHHHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc----CCceEEEEeC
Q 019298          108 GCTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD----QNTVALVIIN  181 (343)
Q Consensus       108 g~~~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~i~~~~  181 (343)
                       ++++...++..+..  +++.|+.....|......+...+.++..++.       .|++.+++.++    +++++|++++
T Consensus       115 -G~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~  186 (407)
T PRK09064        115 -GYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLIAFES  186 (407)
T ss_pred             -HHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEEEEeC
Confidence             45676666776654  7777777777777666666767776655532       36777777664    3578899999


Q ss_pred             CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEe
Q 019298          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTT  260 (343)
Q Consensus       182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~  260 (343)
                      ++||+|.+.+   +++|.++|+++|+++|+||+|+...++..........+. ...+++++||||+||+.|   ||++++
T Consensus       187 v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~~  260 (407)
T PRK09064        187 VYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAGS  260 (407)
T ss_pred             CCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC---ceEecC
Confidence            9999999965   788888899999999999999844343221111111111 123688999999999888   998874


Q ss_pred             CCCCCCCchHHHHHHhhhhc---cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCce
Q 019298          261 DPCGMFRKPKVVERMKKYFD---ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSS  337 (343)
Q Consensus       261 ~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~  337 (343)
                              +++++.++....   .+...++..+.++ .+.++...+.-..+++++++++.+.+.|+++ |+.+..+. +.
T Consensus       261 --------~~~~~~l~~~~~~~~~t~~~~~~~~~aa-~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-~~  329 (407)
T PRK09064        261 --------AALVDAVRSYAPGFIFTTSLPPAIAAAA-LASIRHLKESNEERERHQERAAKLKAALDAA-GIPVMPNE-SH  329 (407)
T ss_pred             --------HHHHHHHHHhCccccccCcCCHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCCCCC-CC
Confidence                    367777765432   1234555555555 3443322222125678889999999999887 77764444 44


Q ss_pred             Eeee
Q 019298          338 LKYL  341 (343)
Q Consensus       338 ~~~~  341 (343)
                      ++++
T Consensus       330 iv~i  333 (407)
T PRK09064        330 IVPV  333 (407)
T ss_pred             EEEE
Confidence            4443

>PRK07811 cystathionine gamma-synthase; Provisional

Probab=99.91  E-value=2.2e-22  Score=185.28  Aligned_cols=220  Identities=18%  Similarity=0.133  Sum_probs=161.2

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh----cCceeEEee
Q 019298           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----RHIEVRHFD  152 (343)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~----~g~~~~~~~  152 (343)
                      ....+|++++|++++        .+..++++++++++..++.+++++||+|+++.|+|......+..    .|.++..++
T Consensus        61 p~~~~Le~~lA~~~g--------~~~~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d  132 (388)
T PRK07811         61 PTRTALEEQLAALEG--------GAYGRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVD  132 (388)
T ss_pred             ccHHHHHHHHHHHhC--------CCceEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeC
Confidence            567899999999984        23345556678999999999999999999999999865443322    466666554


Q ss_pred             cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (343)
Q Consensus       153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~  232 (343)
                      .       .|++++++.+++++++|++++|+||||..   .++++|+++|+++|+++|+|++|+......    ++. . 
T Consensus       133 ~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~~---~dl~~I~~la~~~gi~lIvD~a~a~~~~~~----p~~-~-  196 (388)
T PRK07811        133 L-------SDLDAVRAAITPRTKLIWVETPTNPLLSI---TDIAALAELAHDAGAKVVVDNTFASPYLQQ----PLA-L-  196 (388)
T ss_pred             C-------CCHHHHHHhcCcCCeEEEEECCCCCccee---cCHHHHHHHHHHcCCEEEEECCCCccccCC----chh-h-
Confidence            3       47999999998899999999999999988   678888999999999999999998643221    111 1 


Q ss_pred             CCCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHHHHHH
Q 019298          233 STVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGNF  310 (343)
Q Consensus       233 ~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~  310 (343)
                        +..++++|++|.++.+| .+.||+++++       +++.++++..+.. ....++.....+ ...|+   .+-.+.++
T Consensus       197 --gaDivv~S~sK~l~g~~~~~gG~vv~~~-------~~l~~~~~~~~~~~g~~~s~~~a~l~-~~~L~---tl~~R~~~  263 (388)
T PRK07811        197 --GADVVVHSTTKYIGGHSDVVGGALVTND-------EELDEAFAFLQNGAGAVPGPFDAYLT-LRGLK---TLAVRMDR  263 (388)
T ss_pred             --CCcEEEecCceeecCCCCcEEEEEEECC-------HHHHHHHHHHHHhcCCCCCHHHHHHH-HhccC---cHHHHHHH
Confidence              22399999999998865 5679988754       3566766655443 334455544433 33333   23336666


Q ss_pred             HHHHHHHHHHhhcCCCCce-eeCC
Q 019298          311 LENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       311 ~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      ..++...+.+.|+.+|++. ++.|
T Consensus       264 ~~~na~~la~~L~~~p~v~~V~yP  287 (388)
T PRK07811        264 HSENAEAVAEFLAGHPEVSTVLYP  287 (388)
T ss_pred             HHHHHHHHHHHHHhCCCeeEEECC
Confidence            7788888999999888876 5555

>PRK06460 hypothetical protein; Provisional

Probab=99.91  E-value=1.7e-22  Score=185.22  Aligned_cols=218  Identities=14%  Similarity=0.090  Sum_probs=156.2

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCc----chHHHHHhcCceeEEee
Q 019298           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP----IYELSAAFRHIEVRHFD  152 (343)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~----~~~~~~~~~g~~~~~~~  152 (343)
                      ....+|++++|++++      .. ..++ ++++++++..++.+++++||+|+++.|.|.    .+...++..|.++..++
T Consensus        45 p~~~~L~~~lA~l~g------~~-~~v~-~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~  116 (376)
T PRK06460         45 PTVLELTKKIVELEN------AE-MGVA-FSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASN  116 (376)
T ss_pred             ccHHHHHHHHHHHhC------CC-cEEE-eCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEEC
Confidence            467899999999983      22 3444 455579999999999999999999987653    34556777898888775


Q ss_pred             cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (343)
Q Consensus       153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~  232 (343)
                      .+       +.+.+++.++++++++++++|+||||.+++.+   +|+++|+++|+++|+|++|.....    ..+   + 
T Consensus       117 ~~-------~~~~l~~~~~~~tklV~l~sp~NPtG~v~d~~---~I~~la~~~g~~vivDea~~~~~~----~~~---l-  178 (376)
T PRK06460        117 PG-------SDNIIEKAKSKRYDVVFVENITNPLLRVVDIT---ELSKVCKENGSILIVDATFSTPIN----QKP---L-  178 (376)
T ss_pred             CC-------CHHHHHHhcCCCceEEEEECCCCCCCcccCHH---HHHHHHHHcCCEEEEECCcCcccc----CCh---h-
Confidence            42       22345555566889999999999999998764   577888899999999999975321    111   1 


Q ss_pred             CCCCEEEEccCccccCCC-CCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHH
Q 019298          233 STVPILTLGSLSKRWIVP-GWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGN  309 (343)
Q Consensus       233 ~~~~~i~~~S~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~  309 (343)
                      ..+..++++|+||.|+.. +.++||++++        ++++++++..... ..+.++.....+    ++. .++++ +++
T Consensus       179 ~~~~divv~S~sK~l~G~~~~~~G~~~~~--------~~l~~~l~~~~~~~g~~~~~~~a~~~----l~~-~~~l~~r~~  245 (376)
T PRK06460        179 ELGADIVVHSASKFLAGHNDVIAGLAAGY--------GKLLNVIDQMRRTLGTSLDPHAAYLT----LRG-IKTLKIRMD  245 (376)
T ss_pred             hcCCCEEEeecceeccCCCCceEEEEecC--------HHHHHHHHHHHHhcCCCCCHHHHHHH----Hhc-hhhHHHHHH
Confidence            113459999999998654 3789998874        4688888766532 223444332222    222 35555 888


Q ss_pred             HHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          310 FLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       310 ~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      ++.++++.+.+.|+++|.+. ++.|
T Consensus       246 ~~~~n~~~l~~~L~~~p~v~~v~yp  270 (376)
T PRK06460        246 VINRNAEQIAEFLEGHPKVVKVYYP  270 (376)
T ss_pred             HHHHHHHHHHHHHHcCCCccEEECC
Confidence            89999999999999888776 5444

>PRK02948 cysteine desulfurase; Provisional

Probab=99.91  E-value=2.5e-22  Score=185.46  Aligned_cols=262  Identities=15%  Similarity=0.044  Sum_probs=180.9

Q ss_pred             eEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC--------CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298           38 ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT--------AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (343)
Q Consensus        38 i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~--------~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~  109 (343)
                      +.|+.+..     .++++.+.+++.+.+.... .++...        .-..++|+.+++++      +.++++|++++|+
T Consensus         2 ~yld~a~~-----~~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~i~~~~g~   69 (381)
T PRK02948          2 IYLDYAAT-----TPMSKEALQTYQKAASQYF-GNESSLHDIGGTASSLLQVCRKTFAEMI------GGEEQGIYFTSGG   69 (381)
T ss_pred             EeccCCCC-----CCCCHHHHHHHHHHHHhcC-CCCccccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCcH
Confidence            44555542     3567889999988776321 111110        11346677777777      4578899999999


Q ss_pred             HHHHHHHHHHhc----CCCCeEEEeCCCCcchHH---HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCC
Q 019298          110 TQAIDVAMALLS----RPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP  182 (343)
Q Consensus       110 ~~al~~~~~~l~----~~gd~vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p  182 (343)
                      ++++..++.++.    ++||+|++....|+++..   .++..|.+++.++++  .++.+|++++++.++++++++++++|
T Consensus        70 t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~~~~~lv~~~~~  147 (381)
T PRK02948         70 TESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVD--KSGLIRLVDLERAITPDTVLASIQHA  147 (381)
T ss_pred             HHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeC--CCCCCCHHHHHHhcCCCCEEEEEECC
Confidence            999999888875    578999999977765544   456679999998875  34568999999999888899999999


Q ss_pred             CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCC
Q 019298          183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP  262 (343)
Q Consensus       183 ~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~  262 (343)
                      +||||.+++   +++|.++|+++|+++++|+++....    ....+   ...+..+++.|+||.||.+|  +|++++++.
T Consensus       148 ~n~tG~~~~---~~~I~~l~~~~~~~vivD~~~~~g~----~~~~~---~~~~~d~~~~s~~K~~gp~G--~G~l~~~~~  215 (381)
T PRK02948        148 NSEIGTIQP---IAEIGALLKKYNVLFHSDCVQTFGK----LPIDV---FEMGIDSLSVSAHKIYGPKG--VGAVYINPQ  215 (381)
T ss_pred             cCCcEeehh---HHHHHHHHHHcCCEEEEEChhhccc----cccCc---ccCCCCEEEecHHhcCCCCc--EEEEEEcCC
Confidence            999999965   6678888999999999997665421    11111   22235588999999998888  788887543


Q ss_pred             CCCCCchHHHH-HHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCcee
Q 019298          263 CGMFRKPKVVE-RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELIN  330 (343)
Q Consensus       263 ~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~  330 (343)
                      ....   .... .........+.++..++.++ .+++....++++ .++++++.++++.+.|+++ |+.+
T Consensus       216 ~~~~---~~~~~~~~~~~~~~~t~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~v  280 (381)
T PRK02948        216 VRWK---PVFPGTTHEKGFRPGTVNVPGIAAF-LTAAENILKNMQEESLRFKELRSYFLEQIQTL-PLPI  280 (381)
T ss_pred             CCCC---CcccCCCCCCCcCCCCccHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCE
Confidence            2100   0000 00000112456677777766 666655434444 8899999999999999988 6653

>PRK07503 methionine gamma-lyase; Provisional

Probab=99.91  E-value=2.4e-22  Score=185.73  Aligned_cols=225  Identities=17%  Similarity=0.170  Sum_probs=163.6

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchH----HHHHhcC
Q 019298           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRH  145 (343)
Q Consensus        70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g  145 (343)
                      +.+|+. +....|++.++++++        .++.+++++++.++..++.+++++||+|+++.|+|....    ..+...|
T Consensus        59 y~r~~~-p~~~~le~~lA~l~g--------~~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G  129 (403)
T PRK07503         59 YSRISN-PTLALLEQRMASLEG--------GEAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFG  129 (403)
T ss_pred             eeCCCC-chHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCC
Confidence            344544 356899999999983        244577778889999999999999999999999997533    3345678


Q ss_pred             ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (343)
Q Consensus       146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~  225 (343)
                      .++..++..       |++++++++++++++|++++|+||||.+.+   +++|+++|+++|+++|+|++|+..... .  
T Consensus       130 ~~v~~vd~~-------d~~~l~~~i~~~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~~-~--  196 (403)
T PRK07503        130 VTVRHVDLT-------DPAALKAAISDKTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYLQ-R--  196 (403)
T ss_pred             EEEEEeCCC-------CHHHHHHhcCccCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC-C--
Confidence            888877642       689999999888999999999999999954   788888899999999999999864321 1  


Q ss_pred             CcccccCCCCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhh--hcc-ccCcchHHHHHHHhccchhh
Q 019298          226 VPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY--FDI-LGDPATFIQVCIMYGCLSTI  301 (343)
Q Consensus       226 ~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~--~~~-~~~~~~~~~~a~~~~~l~~~  301 (343)
                       ++. +   +..++++|+||.++.+| .+.|+++.+        ++++++++..  ... ....+++.++.+ ...|+  
T Consensus       197 -~l~-~---g~Di~v~S~tK~l~g~gd~~gG~v~~~--------~~l~~~l~~~~~~~~~g~~~s~~~a~l~-l~~L~--  260 (403)
T PRK07503        197 -PLE-L---GADLVVHSATKYLGGHGDITAGLVVGG--------KALADRIRLEGLKDMTGAVMSPFDAFLL-MRGLK--  260 (403)
T ss_pred             -chh-h---CCCEEEccccccccCCCceeEEEEEcC--------HHHHHHHHhhhHHhCcCCCCCHHHHHHH-HcCcc--
Confidence             111 1   23499999999999876 677887752        4677777633  322 345666666555 33332  


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          302 MQIMIHGNFLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       302 ~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                       .+-.+.++..++...+.+.|+.+|.+. ++.|
T Consensus       261 -tl~~r~~~~~~na~~~a~~L~~~p~v~~V~~P  292 (403)
T PRK07503        261 -TLALRMDRHCASAQAVAEWLARHPAVELVHYP  292 (403)
T ss_pred             -hHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence             233355556678888888898887766 4444

>TIGR01328 met_gam_lyase methionine gamma-lyase

Probab=99.91  E-value=2.4e-22  Score=185.06  Aligned_cols=226  Identities=13%  Similarity=0.115  Sum_probs=163.7

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchH----HHHHhcC
Q 019298           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRH  145 (343)
Q Consensus        70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g  145 (343)
                      ..+|+. +....|++.+|++++        .+..+++++++.++..++.+++++||.|+++.|.|....    ..+...|
T Consensus        53 y~r~~~-p~~~~le~~lA~l~g--------~~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G  123 (391)
T TIGR01328        53 YSRLGN-PTVSNLEGRIAFLEG--------TEAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFG  123 (391)
T ss_pred             eeCCCC-chHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCC
Confidence            344554 345789999999983        345778888899999999999999999999999886533    3445578


Q ss_pred             ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (343)
Q Consensus       146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~  225 (343)
                      .++..++.+       |++++++++++++++|++++|+||+|.+.+   +++|+++|+++|+++|+|++|+......   
T Consensus       124 ~~~~~vd~~-------d~e~l~~~i~~~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~~~---  190 (391)
T TIGR01328       124 IQVDFINMA-------IPEEVKAHIKDNTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPMLTN---  190 (391)
T ss_pred             eEEEEECCC-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhccCC---
Confidence            888877652       689999999888999999999999999965   6778888899999999999998643321   


Q ss_pred             CcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh--cc-ccCcchHHHHHHHhccchhhH
Q 019298          226 VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF--DI-LGDPATFIQVCIMYGCLSTIM  302 (343)
Q Consensus       226 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~--~~-~~~~~~~~~~a~~~~~l~~~~  302 (343)
                       ++.    .+..++++|+||.++++|.++|++++.+       ++++++++...  .. ....++...+++ ...|+   
T Consensus       191 -~~~----~g~Divv~S~sK~lgg~g~~~gG~v~~~-------~~li~~l~~~~~~~~~g~~l~~~~a~l~-l~~L~---  254 (391)
T TIGR01328       191 -PVA----LGVDVVVHSATKYIGGHGDVVAGLICGK-------AELLQQIRMVGIKDMTGSVISPFDAWLI-LRGLK---  254 (391)
T ss_pred             -chh----cCCCEEEccccccccCCCCceEEEEEcC-------HHHHHHHHHHHHHhCCCCCCCcHHHHHH-HhCcC---
Confidence             111    1233899999999999998865444433       46777777542  12 234455544444 23332   


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          303 QIMIHGNFLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       303 ~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      .+..+.++..++...+.+.|+.+|++. ++.|
T Consensus       255 tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp  286 (391)
T TIGR01328       255 TLNIRMKRHSENAMKVAEYLKSHPAVEKVYYP  286 (391)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence            333367777888888899999888766 4444

This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.

>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional

Probab=99.91  E-value=2.5e-22  Score=185.39  Aligned_cols=226  Identities=15%  Similarity=0.106  Sum_probs=166.8

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcc----hHHHHHhcC
Q 019298           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI----YELSAAFRH  145 (343)
Q Consensus        70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~----~~~~~~~~g  145 (343)
                      +.+|+.+ ...+|++.+|++.        ..++.+++++++.++..++.+++++||+|+++...|++    +...++..|
T Consensus        64 Y~r~~~p-~~~~le~~lA~l~--------g~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G  134 (403)
T PRK07810         64 YSRYGNP-TVSMFEERLRLIE--------GAEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWG  134 (403)
T ss_pred             eeCCCCc-hHHHHHHHHHHHh--------CCCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcC
Confidence            4566654 4789999999998        34588888888999999998899999999998866633    344566779


Q ss_pred             ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (343)
Q Consensus       146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~  225 (343)
                      .+++.++.       .|++++++++++++++|++++|+||+|.+.   ++++|+++|+++|+++|+|++|+...+..   
T Consensus       135 ~~v~~vd~-------~d~~~l~~ai~~~tklV~~esp~Nptg~v~---dl~~I~~la~~~g~~vivD~a~a~~~~~~---  201 (403)
T PRK07810        135 VETVFVDG-------EDLSQWEEALSVPTQAVFFETPSNPMQSLV---DIAAVSELAHAAGAKVVLDNVFATPLLQR---  201 (403)
T ss_pred             cEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCeec---CHHHHHHHHHHcCCEEEEECCCCccccCC---
Confidence            99888853       378999999988899999999999999995   57888888999999999999998654321   


Q ss_pred             CcccccCCCCCEEEEccCccccCCCCCcE-EEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHH
Q 019298          226 VPMGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQ  303 (343)
Q Consensus       226 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~  303 (343)
                       +. .+   +..+++.|++|.++.+|.++ |++++++       ..+.++++.. .......+++.++++ ...|   ..
T Consensus       202 -~~-~~---gaDivv~S~tK~l~g~g~~~gG~v~~~~-------~~~~~~l~~~~~~~g~~~s~~~a~l~-l~~L---~t  265 (403)
T PRK07810        202 -GL-PL---GADVVVYSGTKHIDGQGRVLGGAILGDR-------EYIDGPVQKLMRHTGPALSAFNAWVL-LKGL---ET  265 (403)
T ss_pred             -hh-hc---CCcEEEccCCceecCCcCceeEEEEeCh-------HHHHHHHHHHHHHhCCCCCHHHHHHH-Hhcc---Cc
Confidence             11 11   23489999999999999988 6666542       1233345543 222346677766666 3333   23


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          304 IMIHGNFLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       304 ~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      +..+.++..++...+.++|+++|++. ++.|
T Consensus       266 l~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP  296 (403)
T PRK07810        266 LALRVRHSNASALRIAEFLEGHPAVRWVRYP  296 (403)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence            33477777778888888999888776 5444

>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase

Probab=99.91  E-value=3.7e-22  Score=183.49  Aligned_cols=225  Identities=19%  Similarity=0.223  Sum_probs=165.6

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcch----HHHHHhcC
Q 019298           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIY----ELSAAFRH  145 (343)
Q Consensus        70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~----~~~~~~~g  145 (343)
                      +.+|+. ....+|++.++++++        .+.+++++|+++++..++.+++++||+|+++.+.|...    ...+...|
T Consensus        48 y~r~~~-p~~~~le~~la~l~g--------~~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g  118 (380)
T TIGR01325        48 YSRYAN-PTVAAFEERIAALEG--------AERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFG  118 (380)
T ss_pred             eecCCC-chHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhC
Confidence            455654 346899999999882        36788899999999999999999999999999988653    33456678


Q ss_pred             ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (343)
Q Consensus       146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~  225 (343)
                      .++..++..       |++++++++++++++|++++|+||+|.+.   ++++|.++|+++|+++|+|++|.......   
T Consensus       119 ~~v~~v~~~-------d~~~l~~~i~~~tklV~le~p~np~g~~~---dl~~I~~la~~~gi~livD~a~~~~~~~~---  185 (380)
T TIGR01325       119 IEVSFVDPT-------DLNAWEAAVKPNTKLVFVETPSNPLGELV---DIAALAELAHAIGALLVVDNVFATPVLQQ---  185 (380)
T ss_pred             CEEEEECCC-------CHHHHHHhcCCCceEEEEECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCcccccCC---
Confidence            888877642       68999998888899999999999999995   57888888999999999999998643221   


Q ss_pred             CcccccCCCCCEEEEccCccccCCCCCcE-EEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHH
Q 019298          226 VPMGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQ  303 (343)
Q Consensus       226 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~  303 (343)
                       ++ .+   +..+++.|+||.++.+|.++ |+++++        +++++.++.... .....++....++ ...+   ..
T Consensus       186 -pl-~~---g~Divv~S~sK~l~g~g~~~gG~vv~~--------~~~~~~l~~~~~~~g~~~~p~~a~~~-l~~l---~t  248 (380)
T TIGR01325       186 -PL-KL---GADVVVYSATKHIDGQGRVMGGVIAGS--------EELMAEVAVYLRHTGPAMSPFNAWVL-LKGL---ET  248 (380)
T ss_pred             -ch-hh---CCCEEEeeccceecCCCCeEEEEEEeC--------HHHHHHHHHHHHhhCCCCCHHHHHHH-Hhcc---Cc
Confidence             11 11   23488999999999999887 555553        357777765532 2334444444333 2222   22


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          304 IMIHGNFLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       304 ~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      +..+.++..+++..+.+.|+++|++. +..|
T Consensus       249 l~~r~~~~~~~a~~la~~L~~~p~v~~V~yp  279 (380)
T TIGR01325       249 LSLRMQKQFDSALAIAEWLQAQPQVQAVYYP  279 (380)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCccEEECC
Confidence            33377778888999999999988766 4444

This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.

>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase

Probab=99.90  E-value=6.3e-22  Score=185.24  Aligned_cols=266  Identities=14%  Similarity=0.193  Sum_probs=183.5

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCC--C---CCC---CCCCHHHHHHHHHHHhhhCCCCCC-CCcEEE
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN--G---YAP---TAGLPLTRRAIAEYLSRDLPYKLT-PNDVFV  105 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---Y~~---~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~~  105 (343)
                      .+.+.|+.+..     .++++.+.+++.+.+.+...+  .   |..   .....++|+.++++++      .. +++|++
T Consensus        31 ~~~iyLd~a~~-----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------~~~~~~v~~   99 (424)
T PLN02855         31 SKLVYLDNAAT-----SQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFIN------ASTSREIVF   99 (424)
T ss_pred             CCeEEeeCccc-----cCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcC------CCCCCEEEE
Confidence            45799999873     356788889988876532111  1   110   0123578889999883      33 579999


Q ss_pred             ecChHHHHHHHHHHh----cCCCCeEEEeCCCCcc----hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEE
Q 019298          106 TSGCTQAIDVAMALL----SRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL  177 (343)
Q Consensus       106 ~~g~~~al~~~~~~l----~~~gd~vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i  177 (343)
                      |+|+++++..+++.+    .++||+|+++.+.|++    +...++..|.+++.++++.+  ..+|++++++.++++++++
T Consensus       100 t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~--~~~~~~~l~~~i~~~t~lv  177 (424)
T PLN02855        100 TRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPD--EVLDVEQLKELLSEKTKLV  177 (424)
T ss_pred             eCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCC--CCcCHHHHHHHhccCceEE
Confidence            999999999998863    5789999999998864    44556778999999987643  3489999999998889999


Q ss_pred             EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEE
Q 019298          178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF  257 (343)
Q Consensus       178 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i  257 (343)
                      ++++++||||..++.   ++|+++|+++|+++++|++|...    ..+..+.   ..+..+++.|++|.+|.+|  +||+
T Consensus       178 ~i~~~~n~tG~~~~~---~~I~~l~~~~g~~vivD~a~~~g----~~~~~~~---~~~~d~~~~s~~K~~gp~G--~G~l  245 (424)
T PLN02855        178 ATHHVSNVLGSILPV---EDIVHWAHAVGAKVLVDACQSVP----HMPVDVQ---TLGADFLVASSHKMCGPTG--IGFL  245 (424)
T ss_pred             EEeCccccccccCCH---HHHHHHHHHcCCEEEEEhhhhcC----CcCCCch---hcCCCEEEeecccccCCCc--cEEE
Confidence            999999999999874   67788889999999999999642    1111222   2223488999999877666  8999


Q ss_pred             EEeCCCCCCCchHHHHHHhhhh---------------------ccccCcchHHHHHHHhccchhhHH--HHHHHHHHHHH
Q 019298          258 VTTDPCGMFRKPKVVERMKKYF---------------------DILGDPATFIQVCIMYGCLSTIMQ--IMIHGNFLENF  314 (343)
Q Consensus       258 ~~~~~~~~~~~~~~~~~l~~~~---------------------~~~~~~~~~~~~a~~~~~l~~~~~--~l~~~~~~~~~  314 (343)
                      +++.        ++++++....                     ....+.+.+...+...++++...+  +-+.+++..+.
T Consensus       246 ~~~~--------~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l  317 (424)
T PLN02855        246 WGKS--------DLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVEL  317 (424)
T ss_pred             EEch--------hhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            8853        3444332110                     011112333333332444432111  11267778888


Q ss_pred             HHHHHHhhcCCCCceeeCC
Q 019298          315 AGSCVPSYKLIPELINFKS  333 (343)
Q Consensus       315 ~~~~~~~L~~~~g~~~~~~  333 (343)
                      ++.+.+.|.+++|++++.+
T Consensus       318 ~~~l~~~L~~~~g~~i~~~  336 (424)
T PLN02855        318 GTYLYEKLSSVPGVRIYGP  336 (424)
T ss_pred             HHHHHHHHhcCCCEEEeCC
Confidence            9999999988888886543

>PRK06767 methionine gamma-lyase; Provisional

Probab=99.90  E-value=6.7e-22  Score=182.13  Aligned_cols=225  Identities=16%  Similarity=0.106  Sum_probs=160.7

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh----cC
Q 019298           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----RH  145 (343)
Q Consensus        70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~----~g  145 (343)
                      +.+|+. +...+|++.+|++++        .++.+++++++.++..++.+++++||+|+++.|.|......+..    .|
T Consensus        55 y~r~~~-pt~~~Le~~lA~l~G--------~~~al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~g  125 (386)
T PRK06767         55 YSRLGN-PTVKLFEERMAVLEG--------GEEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFM  125 (386)
T ss_pred             ccCCCC-cchHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcC
Confidence            445554 356899999999983        24455566667899999989999999999999998776554433    35


Q ss_pred             ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (343)
Q Consensus       146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~  225 (343)
                      .++..++.       .|++++++++++++++|++++|+||||.+++   +++|.++|+++|+++|+|++|...... .  
T Consensus       126 i~~~~~~~-------~d~~~l~~~i~~~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~-~--  192 (386)
T PRK06767        126 ITHSFCDM-------ETEADIENKIRPNTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYLQ-R--  192 (386)
T ss_pred             eEEEEeCC-------CCHHHHHHhhCcCceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcccccC-C--
Confidence            54444422       3789999999888999999999999999965   677788888999999999999753322 1  


Q ss_pred             CcccccCCCCCEEEEccCccccCCCCCcE-EEEEEeCCCCCCCchHHHHHHhh-hhc-cccCcchHHHHHHHhccchhhH
Q 019298          226 VPMGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKK-YFD-ILGDPATFIQVCIMYGCLSTIM  302 (343)
Q Consensus       226 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~l~~-~~~-~~~~~~~~~~~a~~~~~l~~~~  302 (343)
                       ++. .   +..+++.|+||.++++|.++ ||+++++        ++++++.. ... .....+++.++++ ...|+   
T Consensus       193 -pl~-~---g~Div~~S~sK~l~g~g~~~gG~v~~~~--------~~i~~~~~~~~~~~g~~~~~~~a~l~-~~~L~---  255 (386)
T PRK06767        193 -PLE-L---GCDAVVHSATKYIGGHGDVVAGVTICKT--------RALAEKIRPMRKDIGGIMAPFDAWLL-LRGLK---  255 (386)
T ss_pred             -chh-c---CCcEEEecCcceecCCCCceeEEEEeCh--------HHHHHHHHHHHHHhCCCCCHHHHHHH-HcCCC---
Confidence             111 1   22388999999999999986 7888753        45555432 222 2234455555554 33333   


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          303 QIMIHGNFLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       303 ~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      ....+.++.+++...+.+.|+++|++. +..|
T Consensus       256 tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p  287 (386)
T PRK06767        256 TLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYP  287 (386)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHcCCCccEEECC
Confidence            222366788999999999999999988 5544

>PRK07050 cystathionine beta-lyase; Provisional

Probab=99.90  E-value=7.1e-22  Score=181.96  Aligned_cols=226  Identities=16%  Similarity=0.098  Sum_probs=168.7

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH----HHHhcC
Q 019298           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRH  145 (343)
Q Consensus        70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g  145 (343)
                      +.+|+. +...+|++.++++.        ..+++++++|+++++..++.+++++||+|+++.|+|..+..    .+...|
T Consensus        59 Y~r~~~-pt~~~Le~~lA~l~--------g~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~G  129 (394)
T PRK07050         59 YGLHAT-PTSLALAQRLAEIE--------GGRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFG  129 (394)
T ss_pred             cCCCCC-HHHHHHHHHHHHHh--------CCCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcC
Confidence            455544 34678888898887        35799999999999999999999999999999999998663    456678


Q ss_pred             ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (343)
Q Consensus       146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~  225 (343)
                      +++..++..       +.+.+++++++++++|++++|+||+|..   .++++|+++|+++|+++|+|++|....+-    
T Consensus       130 i~v~~vd~~-------~~~~l~~~i~~~tklV~le~p~Np~~~~---~di~~I~~ia~~~gi~livD~a~a~~~~~----  195 (394)
T PRK07050        130 ITVRFYDPL-------IGAGIADLIQPNTRLIWLEAPGSVTMEV---PDVPAITAAARARGVVTAIDNTYSAGLAF----  195 (394)
T ss_pred             eEEEEECCC-------CHHHHHHhcCCCCeEEEEECCCCCCccH---hhHHHHHHHHHHcCCEEEEECCccccccc----
Confidence            888877531       3577888888899999999999999866   89999999999999999999999863321    


Q ss_pred             CcccccCCCCCEEEEccCccccCC-CCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHH
Q 019298          226 VPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQ  303 (343)
Q Consensus       226 ~~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~  303 (343)
                      .+. ..   +..+++.|++|.++. .+.+.|++++.+       +++.++++..+. ...+.++.....+ ...|   ..
T Consensus       196 ~~l-~~---GaDi~v~S~tK~~~g~~~~~gG~v~~~~-------~~~~~~~~~~~~~~G~~~~~~~a~l~-lr~l---~t  260 (394)
T PRK07050        196 KPF-EH---GVDISVQALTKYQSGGSDVLMGATITAD-------AELHAKLKLARMRLGIGVSADDCSLV-LRGL---PS  260 (394)
T ss_pred             CHH-Hc---CCeEEEEECCceecCCCCeeEEEEEECC-------HHHHHHHHHHHHhcCCCCCHHHHHHH-HcCC---Cc
Confidence            111 11   235999999999875 446789888754       467777776654 2445666655444 2223   23


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          304 IMIHGNFLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       304 ~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      +..+.++..++...+.+.|+++|++. ++.|
T Consensus       261 l~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p  291 (394)
T PRK07050        261 LQVRLAAHDRSALEVAEWLKARPEIATVLHP  291 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence            44466777777778888998887766 4433

>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

Probab=99.90  E-value=7.7e-22  Score=180.93  Aligned_cols=220  Identities=15%  Similarity=0.105  Sum_probs=167.1

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH----HHHhcCceeEEee
Q 019298           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFD  152 (343)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~  152 (343)
                      ....+|++.++++++        .+..++++++++|+..++.+++++||+|+++.++|.....    .+...|.++..++
T Consensus        40 p~~~~le~~la~l~g--------~~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~  111 (369)
T cd00614          40 PTVDALEKKLAALEG--------GEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVD  111 (369)
T ss_pred             hhHHHHHHHHHHHHC--------CCCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeC
Confidence            457889999999883        3577888888999999999999999999999999987654    3446688877775


Q ss_pred             cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (343)
Q Consensus       153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~  232 (343)
                      .+       |++++++++++++++|++.+|+||+|.+.+   +++|+++|+++|+++|+|++|+...+.    .+.    
T Consensus       112 ~~-------d~~~l~~~i~~~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~----~~~----  173 (369)
T cd00614         112 PD-------DPEALEAAIKPETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQ----RPL----  173 (369)
T ss_pred             CC-------CHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcC----Chh----
Confidence            42       589999999888999999999999999965   778889999999999999999865431    111    


Q ss_pred             CCCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHHHHHH
Q 019298          233 STVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMIHGNF  310 (343)
Q Consensus       233 ~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~  310 (343)
                      ..+..+++.|+||.++.+| .+.||+++++       .+++++++.... .....++....++ ...|+   ....++++
T Consensus       174 ~~g~Divv~S~tK~l~g~~~~~gG~v~~~~-------~~l~~~l~~~~~~~g~~~~p~~a~~~-l~~l~---tl~~r~~~  242 (369)
T cd00614         174 ELGADIVVHSATKYIGGHSDVIAGVVVGSG-------EALIQRLRFLRLALGTILSPFDAWLL-LRGLK---TLPLRMER  242 (369)
T ss_pred             hhCCcEEEeccceeccCCCCceEEEEEeCc-------HHHHHHHHHHHHhhCCCCCHHHHHHH-HcCCC---CHHHHHHH
Confidence            1134599999999998877 7889998853       257777776543 2345566665555 33333   23336777


Q ss_pred             HHHHHHHHHHhhcCCCCce-eeCC
Q 019298          311 LENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       311 ~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      ..++...+.+.|+++|++. +..|
T Consensus       243 ~~~na~~la~~L~~~~~v~~V~~p  266 (369)
T cd00614         243 HSENALKVAEFLEKHPKVERVYYP  266 (369)
T ss_pred             HHHHHHHHHHHHHcCCCccEEECC
Confidence            8889999999999987765 4444

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.

>PRK08861 cystathionine gamma-synthase; Provisional

Probab=99.90  E-value=6.6e-22  Score=181.06  Aligned_cols=226  Identities=15%  Similarity=0.134  Sum_probs=167.6

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH----HhcC
Q 019298           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRH  145 (343)
Q Consensus        70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~g  145 (343)
                      +.+|+. +....|++++|++.        ..+++++++|+++++..++.+++++||+|+++.|+|+.....+    ...|
T Consensus        47 Y~R~~n-pt~~~Le~~lA~le--------g~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~g  117 (388)
T PRK08861         47 YTRSGN-PNRGLLEQTLSELE--------SGKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGD  117 (388)
T ss_pred             ccCCCC-chHHHHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCC
Confidence            455555 45789999999998        3589999999999999999999999999999999998643322    2345


Q ss_pred             ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (343)
Q Consensus       146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~  225 (343)
                      .++..++.       .|++++++++++++++|++++|+||||.+++.   ++|+++|+++|+++|+|++|....+..   
T Consensus       118 i~v~~vd~-------~d~e~l~~~i~~~tklV~lesP~NPtG~v~dl---~~I~~la~~~gi~vIvDea~~~~~~~~---  184 (388)
T PRK08861        118 FKVQFVDQ-------SDAAALDAALAKKPKLILLETPSNPLVRVVDI---AELCQKAKAVGALVAVDNTFLTPVLQK---  184 (388)
T ss_pred             eEEEEECC-------CCHHHHHHhcCcCCeEEEEECCCCCCCcccCH---HHHHHHHHHcCCEEEEECCccccccCC---
Confidence            66666632       47899999998899999999999999999774   577788889999999999998644321   


Q ss_pred             CcccccCCCCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHH
Q 019298          226 VPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQ  303 (343)
Q Consensus       226 ~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~  303 (343)
                       ++ .++   -.++++|++|.++.++ ...|++++.+       +++.++++..+.. ....+++....+ ..-|   ..
T Consensus       185 -pl-~~G---aDivv~S~tK~l~G~~d~~gG~i~~~~-------~~~~~~~~~~~~~~G~~~~p~~a~l~-~rgl---~T  248 (388)
T PRK08861        185 -PL-ELG---ADFVIHSTTKYINGHSDVIGGVLITKT-------KEHAEELAWWGNCIGATGTPFDSYMT-LRGI---RT  248 (388)
T ss_pred             -Cc-ccC---CCEEEeecceeccCCCcceeEEEEecH-------HHHHHHHHHHHhccCCCCChHHHHHH-HhcC---CC
Confidence             11 122   2399999999988754 6788887743       3566667655443 345567665555 2222   22


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          304 IMIHGNFLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       304 ~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      +--+.++..++...+.+.|+.+|.+. |+.|
T Consensus       249 l~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP  279 (388)
T PRK08861        249 LGARMRVHEESAQQILAYLQTQSLVGTIYHP  279 (388)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCeeEEECC
Confidence            22277778888889999999988776 5555

>PRK13393 5-aminolevulinate synthase; Provisional

Probab=99.90  E-value=2.7e-21  Score=179.89  Aligned_cols=270  Identities=13%  Similarity=0.100  Sum_probs=181.1

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCC--CC----CCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN--GY----APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~Y----~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~  107 (343)
                      +++.++|+..+   |.++..+|++++++.++++.-..+  .+    ....-..+|++.+++++.        .+..++++
T Consensus        44 ~~~~~~~~sn~---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g--------~~~~~~~~  112 (406)
T PRK13393         44 PREVTVWCSND---YLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHG--------KEAALLFT  112 (406)
T ss_pred             CccEEEeeccc---ccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhC--------CCcEEEeC
Confidence            35678888887   456778999999999998752110  11    111124567788887772        25555555


Q ss_pred             ChHHHHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc----CCceEEEEeC
Q 019298          108 GCTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD----QNTVALVIIN  181 (343)
Q Consensus       108 g~~~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~i~~~~  181 (343)
                      ++++++..++..+..  +||.|++....|......++..|.++..++.       .|++.+++.++    ++++++++++
T Consensus       113 SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~~~  185 (406)
T PRK13393        113 SGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLDPHRPKLVAFES  185 (406)
T ss_pred             CcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhccCCCCEEEEEcC
Confidence            556788888887765  7888888888888777777777877666543       25666766553    2567888899


Q ss_pred             CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC-CCEEEEccCccccCCCCCcEEEEEEe
Q 019298          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST-VPILTLGSLSKRWIVPGWRLGWFVTT  260 (343)
Q Consensus       182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~-~~~i~~~S~sK~~~~~G~r~G~i~~~  260 (343)
                      ++|++|.+.+   +++|.++|+++++++|+||+|+...++..........+.. ..+|+++||||.|++.|   ||++++
T Consensus       186 v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G---G~~~~~  259 (406)
T PRK13393        186 VYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG---GYITGS  259 (406)
T ss_pred             CCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC---ceeeCC
Confidence            9999999966   7888888999999999999998544442221111111111 23588899999999888   998864


Q ss_pred             CCCCCCCchHHHHHHhhhhc---cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCce
Q 019298          261 DPCGMFRKPKVVERMKKYFD---ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSS  337 (343)
Q Consensus       261 ~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~  337 (343)
                              +++++.++....   .+...++..++++ .++|+...+....+.+++++++++.+.|+++ |+.+..+.+.+
T Consensus       260 --------~~~~~~l~~~~~~~~~t~~~~p~~~aa~-~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~i  329 (406)
T PRK13393        260 --------AALCDFIRSFASGFIFTTSLPPAVAAGA-LASVRHLKASSAERERHQDRVARLRARLDKA-GIPHLPNPSHI  329 (406)
T ss_pred             --------HHHHHHHHHhCcCceecCccCHHHHHHH-HHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCe
Confidence                    367777766532   1334566666666 4555432222234567788889999999876 77654555544

>cd00610 OAT_like Acetyl ornithine aminotransferase family

Probab=99.90  E-value=8.9e-22  Score=183.83  Aligned_cols=289  Identities=17%  Similarity=0.120  Sum_probs=187.2

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      ++++.|||+.|...  ..++ .+|.+.+++.+++...  ..|+...+..++...+++.+.+.++  ...+++++++|+++
T Consensus        34 dG~~~id~~~~~~~--~~lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgse  107 (413)
T cd00610          34 DGNRYLDFLSGIGV--LNLGHNHPEVVEALKEQLAKL--THFSLGFFYNEPAVELAELLLALTP--EGLDKVFFVNSGTE  107 (413)
T ss_pred             CCCEEEEcCccHHh--hccCCCCHHHHHHHHHHHHhC--cCccCcccCCHHHHHHHHHHHHhCC--CCCCEEEEcCcHHH
Confidence            37889999987533  2344 7899999999998643  3454432344555555555555443  35789999999999


Q ss_pred             HHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCCC----CCCCCCHHHHHhhhcC
Q 019298          112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPD----KGWEVDLDDIESLADQ  172 (343)
Q Consensus       112 al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~----~~~~~d~~~l~~~~~~  172 (343)
                      ++..+++.+.  .++++|++.+++|+++.......+.             ++..++.+..    ..+..|++.|++.++.
T Consensus       108 a~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~  187 (413)
T cd00610         108 AVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEE  187 (413)
T ss_pred             HHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhc
Confidence            9999999874  5689999999999886554443321             2344443211    1234588999988865


Q ss_pred             --CceEEEEeCC-CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccC
Q 019298          173 --NTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI  248 (343)
Q Consensus       173 --~~~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~  248 (343)
                        +...+++++| +|++|..+ +.+.+++|.++|++||+++|+||+|.++...+... ....++...+   +.|+||.++
T Consensus       188 ~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~-~~~~~~~~~d---~~t~sK~l~  263 (413)
T cd00610         188 HPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMF-AFEHFGVEPD---IVTLGKGLG  263 (413)
T ss_pred             CCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchh-hHhhcCCCCC---eEEEccccc
Confidence              3445556666 67779876 67789999999999999999999999864433211 1111121112   348899988


Q ss_pred             CCCCcEEEEEEeCCCCCCCchHHHHHH--hhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCC
Q 019298          249 VPGWRLGWFVTTDPCGMFRKPKVVERM--KKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLI  325 (343)
Q Consensus       249 ~~G~r~G~i~~~~~~~~~~~~~~~~~l--~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~  325 (343)
                      . |+|+||++++        +++++.+  .... ..+.+.+++.+.++ .++|+...+ .+..++++++.+.+.+.|+.+
T Consensus       264 ~-g~~~g~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~~a~-~a~l~~l~~-~~~~~~~~~~~~~l~~~l~~~  332 (413)
T cd00610         264 G-GLPLGAVLGR--------EEIMDAFPAGPGLHGGTFGGNPLACAAA-LAVLEVLEE-EGLLENAAELGEYLRERLREL  332 (413)
T ss_pred             C-ccccEEEEEc--------HHHHHhhccCCCCCCCCCCcCHHHHHHH-HHHHHHHHh-ccHHHHHHHHHHHHHHHHHHH
Confidence            6 7999999884        3677775  2222 23456677777776 444432111 126677777777777777654


Q ss_pred             C---CceeeCCCCceEeeec
Q 019298          326 P---ELINFKSTGSSLKYLD  342 (343)
Q Consensus       326 ~---g~~~~~~~~g~~~~~~  342 (343)
                      .   ++.......|.++|+.
T Consensus       333 ~~~~~~~~~~~~~g~~~~~~  352 (413)
T cd00610         333 AEKHPLVGDVRGRGLMIGIE  352 (413)
T ss_pred             HhhCCcEEEeecCceEEEEE
Confidence            1   1221123346666654

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.

>PRK08574 cystathionine gamma-synthase; Provisional

Probab=99.90  E-value=1.7e-21  Score=178.87  Aligned_cols=219  Identities=15%  Similarity=0.092  Sum_probs=161.0

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHH---hcCceeEEeec
Q 019298           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA---FRHIEVRHFDL  153 (343)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~---~~g~~~~~~~~  153 (343)
                      +...+|++.+|+++        ..+++++++|+++++..++.+++++||+|+++.|+|..+...++   ..|.++..+. 
T Consensus        53 p~~~~lE~~lA~l~--------g~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~-  123 (385)
T PRK08574         53 PTLRPLEEALAKLE--------GGVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY-  123 (385)
T ss_pred             ccHHHHHHHHHHHh--------CCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC-
Confidence            46789999999998        34678888999999999999999999999999999998766553   3466665542 


Q ss_pred             CCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298          154 LPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (343)
Q Consensus       154 ~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~  232 (343)
                             +|.+++++++++ ++++|++++|+||||.+++   +++|+++|+++|+++|+|++|+.....    .++    
T Consensus       124 -------~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~~----~~l----  185 (385)
T PRK08574        124 -------PSTEDIIEAIKEGRTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLLY----RPL----  185 (385)
T ss_pred             -------CCHHHHHHhcCccCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccC----Chh----
Confidence                   468899999987 8999999999999999976   567888899999999999999753211    111    


Q ss_pred             CCCCEEEEccCccccCCCCCcE-EEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHHHHHH
Q 019298          233 STVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGNF  310 (343)
Q Consensus       233 ~~~~~i~~~S~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~  310 (343)
                      ..+..+++.|+||.++.+|..+ |++++.+       .++.++++..... ....+++..+.+ ...|+   .+..+.++
T Consensus       186 ~~GaDivv~S~sK~l~g~~d~~gG~vi~~~-------~~~~~~~~~~~~~~g~~~~p~~a~l~-l~~l~---tL~~R~~~  254 (385)
T PRK08574        186 RHGADFVVHSLTKYIAGHNDVVGGVAVAWS-------GEFLEELWEWRRRLGTIMQPFEAYLV-LRGLK---TLEVRFER  254 (385)
T ss_pred             hhCCcEEEeeCceeecCCCCceeEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHH-HcccC---cHHHHHHH
Confidence            1233599999999998888765 6566643       3577777655442 334555544444 33333   23336666


Q ss_pred             HHHHHHHHHHhhcCCCCce-eeCC
Q 019298          311 LENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       311 ~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      ..++...+.+.|+.+|.+. |+.|
T Consensus       255 ~~~na~~la~~L~~~p~v~~V~yP  278 (385)
T PRK08574        255 QCRNAMAIAEFLSEHPKVAEVYYP  278 (385)
T ss_pred             HHHHHHHHHHHHHcCCCcCEEECC
Confidence            6778888888998887765 4444

>cd06453 SufS_like Cysteine desulfurase (SufS)-like

Probab=99.90  E-value=1.9e-21  Score=179.16  Aligned_cols=253  Identities=15%  Similarity=0.162  Sum_probs=174.6

Q ss_pred             CCCcHHHHHHHHHHHhcCCCC--CCC----C--CCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEecChHHHHHHHHHHhc
Q 019298           51 FHTTHVATEAVAEALLSEKFN--GYA----P--TAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVTSGCTQAIDVAMALLS  121 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~--~Y~----~--~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~~~~g~~~al~~~~~~l~  121 (343)
                      .++++.+.+++.+.+.+...+  ...    +  .....++|+.++++++      .+ ++++++|+|+++++..++.++.
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~~v~~~~g~t~a~~~~~~~l~   82 (373)
T cd06453           9 SQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFIN------APSPDEIIFTRNTTEAINLVAYGLG   82 (373)
T ss_pred             cCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------CCCCCeEEEeCCHHHHHHHHHHHhh
Confidence            346788888888877432110  000    0  1223568888888883      34 6799999999999999999998


Q ss_pred             C---CCCeEEEeCCCCcch----HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298          122 R---PGANILLPRPGFPIY----ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (343)
Q Consensus       122 ~---~gd~vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~  194 (343)
                      .   +||+|++++++|++.    ...++..|.+++.++.+  .++.+|++++++.+.++++++++++|+||||...+   
T Consensus        83 ~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~---  157 (373)
T cd06453          83 RANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVD--DDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINP---  157 (373)
T ss_pred             hcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecC--CCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCC---
Confidence            7   899999999999874    33455679999999875  45679999999999888999999999999999976   


Q ss_pred             HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (343)
Q Consensus       195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~  274 (343)
                      +++|.++|+++|+++++|++|+....    +..+...   +..+++.|++|.++.  .++|++++++        +++++
T Consensus       158 ~~~i~~~~~~~~~~li~D~a~~~~~~----~~~~~~~---~~d~~~~s~~K~~~~--~g~g~~~~~~--------~~~~~  220 (373)
T cd06453         158 VKEIGEIAHEAGVPVLVDGAQSAGHM----PVDVQDL---GCDFLAFSGHKMLGP--TGIGVLYGKE--------ELLEE  220 (373)
T ss_pred             HHHHHHHHHHcCCEEEEEhhhhcCce----eeecccc---CCCEEEeccccccCC--CCcEEEEEch--------HHhhc
Confidence            56788888899999999999875321    1111111   233777899999876  5589998853        45555


Q ss_pred             Hhhhhc---------------------c-ccCcchHHHHHHHhccchhhH--HHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298          275 MKKYFD---------------------I-LGDPATFIQVCIMYGCLSTIM--QIMIHGNFLENFAGSCVPSYKLIPELIN  330 (343)
Q Consensus       275 l~~~~~---------------------~-~~~~~~~~~~a~~~~~l~~~~--~~l~~~~~~~~~~~~~~~~L~~~~g~~~  330 (343)
                      ++....                     . .+.++.....++ ..++....  .+-+.+++.+++++.+.+.|++++++.+
T Consensus       221 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al-~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~  299 (373)
T cd06453         221 MPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGL-GAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRV  299 (373)
T ss_pred             CCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHH-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence            443210                     0 012333333333 22322111  1122667777888899999998888886


Q ss_pred             eC
Q 019298          331 FK  332 (343)
Q Consensus       331 ~~  332 (343)
                      ..
T Consensus       300 ~~  301 (373)
T cd06453         300 YG  301 (373)
T ss_pred             eC
Confidence            43

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.

>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type

Probab=99.90  E-value=2.6e-21  Score=178.79  Aligned_cols=262  Identities=11%  Similarity=0.080  Sum_probs=181.4

Q ss_pred             CCCcHHHHHHHHHHHhcCC-----CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc----
Q 019298           51 FHTTHVATEAVAEALLSEK-----FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS----  121 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~-----~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~----  121 (343)
                      .++++.+++++.+.+.+..     .+.|+. .+.+.+++++++++.. .+. .++++|++|+|+++++..+++++.    
T Consensus         9 ~~~~~~v~~~~~~~~~~~~~n~~~~~~~~~-~~~~~l~~a~~~~~~~-~~~-~~~~~i~~t~g~teal~~~~~~~~~~~~   85 (382)
T TIGR03403         9 TMLDPKVKELMDPFFCDIYGNPNSLHQFGT-ATHPAIAEALDKLYKG-INA-RDLDDIIITSCATESNNWVLKGVYFDEI   85 (382)
T ss_pred             CCCCHHHHHHHHHHHHhcCcCCccccHHHH-HHHHHHHHHHHHHHHH-cCc-CCCCeEEEeCCHHHHHHHHHHHHHHhhc
Confidence            3567889999988876421     122332 3557888888888753 221 267899999999999999998762    


Q ss_pred             -CC-CCeEEEeCCCCcchHHH---HHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHH
Q 019298          122 -RP-GANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQ  196 (343)
Q Consensus       122 -~~-gd~vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~  196 (343)
                       ++ +++|++..+.|+.+...   ++..|.+++.+++++  ++.+|++.+++.++++++++++++|+||||..++   ++
T Consensus        86 ~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~--~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~---~~  160 (382)
T TIGR03403        86 LKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINE--QGTITAEQVREAITEKTALVSVMWANNETGMIFP---IK  160 (382)
T ss_pred             ccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCC--CCCCCHHHHHHhcccCCeEEEEEcccCCCccccC---HH
Confidence             45 47899998777665543   456799999998763  3568999999999888999999999999999977   45


Q ss_pred             HHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH--HH
Q 019298          197 KLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV--ER  274 (343)
Q Consensus       197 ~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~--~~  274 (343)
                      +|.++|+++|+++++|+++....    .+..+...   +-.+++.|++|.+|.+|  +|++.+.+...+.  +.+.  ..
T Consensus       161 ~I~~la~~~g~~~ivD~a~~~g~----~~~~~~~~---~~D~~~~s~~K~~gp~G--~g~l~vr~~~~~~--p~~~g~~~  229 (382)
T TIGR03403       161 EIGEICKERGVLFHTDAVQAIGK----IPVDVQKA---GVDFLSFSAHKFHGPKG--VGGLYIRKGVELT--PLFHGGEH  229 (382)
T ss_pred             HHHHHHHHcCCEEEEechhhcCC----CccCcccc---CCCEEEEcchhhCCCCc--eEEEEECCCCCCC--CcccCCCC
Confidence            77888889999999999987421    11112111   22388899999887778  5888775433211  1111  00


Q ss_pred             HhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCC
Q 019298          275 MKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKST  334 (343)
Q Consensus       275 l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~  334 (343)
                      +..  ...+.++...+.++ ..++....+.++ .++++++.++++.+.|.++||+.+..+.
T Consensus       230 ~~~--~~~gt~~~~~~~al-~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~  287 (382)
T TIGR03403       230 MGG--RRSGTLNVPYIVAM-GEAMRLANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDR  287 (382)
T ss_pred             CCC--cccCCcChHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCC
Confidence            111  11345666666565 444443333344 6788899999999999988888876553

Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.

>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed

Probab=99.89  E-value=2.9e-21  Score=179.41  Aligned_cols=279  Identities=18%  Similarity=0.101  Sum_probs=181.3

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      +++++||..|.-..+.++ .+|++.+++.+++++..  .+...... +....+++.+....    ..+.+++++++++++
T Consensus        39 G~~~iD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~--~~~~~~~~-~~~~~l~~~l~~~~----~~~~~~~~~sGseA~  110 (403)
T PRK05093         39 GKEYIDFAGGIAVTALGH-CHPALVKALKEQGEKLW--HISNVFTN-EPALRLAKKLIDAT----FAERVFFANSGAEAN  110 (403)
T ss_pred             CCEEEEcCcCHHhccCCC-CCHHHHHHHHHHHHhcC--cccCccCC-HHHHHHHHHHHhhC----CCCEEEEeCchHHHH
Confidence            778999988743322223 88999999999987521  11111111 22234444443311    246999999999999


Q ss_pred             HHHHHHhc--------CCCCeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCCCCCCCCCHHHHHhhhcC
Q 019298          114 DVAMALLS--------RPGANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGWEVDLDDIESLADQ  172 (343)
Q Consensus       114 ~~~~~~l~--------~~gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~~~l~~~~~~  172 (343)
                      ..+++...        ...++|+..+-+|++....+...+.             ++..++.       -|++.+++.+.+
T Consensus       111 e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~  183 (403)
T PRK05093        111 EAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-------NDLAAVKAVIDD  183 (403)
T ss_pred             HHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-------CCHHHHHHHhcC
Confidence            99998652        1235788788777765433322211             1111111       278999998876


Q ss_pred             CceEEEEeCCCCCccccc--CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCC
Q 019298          173 NTVALVIINPGNPCGNVY--SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP  250 (343)
Q Consensus       173 ~~~~i~~~~p~nptG~~~--~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~  250 (343)
                      ++++|+++ |.||+|-++  +.+.+++|+++|++||+++|+||+|.++.+.+... +....+....   +.||||+++ +
T Consensus       184 ~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~-~~~~~~~~pd---i~s~sK~l~-~  257 (403)
T PRK05093        184 HTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLF-AYMHYGVTPD---ILTSAKALG-G  257 (403)
T ss_pred             CeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch-hhhhcCCCCC---EEEeccccc-C
Confidence            66666666 888877665  88999999999999999999999999887666421 2111211112   568999988 8


Q ss_pred             CCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCC---
Q 019298          251 GWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIP---  326 (343)
Q Consensus       251 G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~---  326 (343)
                      |+|+||+++++        ++++.+... ...+.+.+++.|.++ .++|+.. .-.+.+++++++++.+.+.|+++.   
T Consensus       258 G~rig~vv~~~--------~i~~~l~~~~~~~t~~~~~~~~~aa-~a~L~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~  327 (403)
T PRK05093        258 GFPIGAMLTTA--------EIASHFKVGTHGSTYGGNPLACAVA-EAVFDII-NTPEVLEGVKARRQRFVDGLQKINQKY  327 (403)
T ss_pred             CcceEEEEEcH--------HHHhhcCCCCCCCCCCCCHHHHHHH-HHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhC
Confidence            99999999963        677777653 333556788888887 4444321 111267888899999999888751   


Q ss_pred             CceeeCCCCceEeeecC
Q 019298          327 ELINFKSTGSSLKYLDL  343 (343)
Q Consensus       327 g~~~~~~~~g~~~~~~l  343 (343)
                      ++....+.+|+++|+.+
T Consensus       328 ~~~~~~~~~G~~~~~~l  344 (403)
T PRK05093        328 GVFSEIRGMGLLIGAEL  344 (403)
T ss_pred             CCeEeEeeCceEEEEEe
Confidence            22223446688888753

>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases

Probab=99.89  E-value=1.8e-21  Score=169.68  Aligned_cols=255  Identities=20%  Similarity=0.247  Sum_probs=158.6

Q ss_pred             CCCCC-CCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHH--HHHhc------------CCCCeEEEeCCC
Q 019298           69 KFNGY-APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA--MALLS------------RPGANILLPRPG  133 (343)
Q Consensus        69 ~~~~Y-~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~--~~~l~------------~~gd~vl~~~p~  133 (343)
                      ..-+| +-..|.+++|+-.++++      ++++++|++..+++-.|..-  .++++            .+.-+.++|.|+
T Consensus        60 D~RNY~G~l~Gipe~r~l~a~ll------gv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPG  133 (425)
T PF12897_consen   60 DCRNYPGGLDGIPEARELFAELL------GVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPG  133 (425)
T ss_dssp             BTTSS-S-SS--HHHHHHHHHHH------TS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES-
T ss_pred             cccCCCCccCChHHHHHHHHHHh------CCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCC
Confidence            45689 88899999999999999      78999999987766544322  22221            112478999999


Q ss_pred             CcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCC--CCCcccccCHHHHHHHHHH-HhhcCcEE
Q 019298          134 FPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINP--GNPCGNVYSYQHLQKLAET-ANKLKTLV  209 (343)
Q Consensus       134 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p--~nptG~~~~~~~l~~l~~~-~~~~~~~~  209 (343)
                      |......++.+|++.+.+++.+   .++|+|.+++.+.+ ....-+.|.|  +||||.++|.|.+++++++ ....|+.|
T Consensus       134 YDRHFai~E~~Giemi~VpM~~---dGPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI  210 (425)
T PF12897_consen  134 YDRHFAITEHFGIEMIPVPMTE---DGPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRI  210 (425)
T ss_dssp             -HHHHHHHHHCT-EEEEEEEET---TEE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EE
T ss_pred             chHHHHHHHhhCcEEEecCCCC---CCCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEE
Confidence            9999999999999999999965   36899999998853 3333445667  8999999999999999998 44579999


Q ss_pred             EEccCCCcccc-CCCCCCc---c----cccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-
Q 019298          210 IADEVYGHLVF-GDKPFVP---M----GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-  280 (343)
Q Consensus       210 i~D~ay~~~~~-~~~~~~~---~----~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-  280 (343)
                      +.|++|+...+ ++.+...   +    ...+..++++.+.|+||. ..+|.+|+++.++.        +-++.+++... 
T Consensus       211 ~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKI-Tf~GaGva~~aaS~--------~Nl~~~~~~~~~  281 (425)
T PF12897_consen  211 FWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKI-TFPGAGVAFFAASE--------ANLAWIKKHLSV  281 (425)
T ss_dssp             EEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTT-S-TTSS-EEEEE-H--------HHHHHHHHHHHH
T ss_pred             EeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEeccccc-ccCCcceeeeecCH--------HHHHHHHHHhcC
Confidence            99999998766 2222111   1    112345689999999999 79999999999864        34444444432 


Q ss_pred             cccCcchHHHHHHHhccchhhH-HH---H-HHHHHHHHHHHHHHHhhcC-CC---Cc-eeeCCCCceEeeec
Q 019298          281 ILGDPATFIQVCIMYGCLSTIM-QI---M-IHGNFLENFAGSCVPSYKL-IP---EL-INFKSTGSSLKYLD  342 (343)
Q Consensus       281 ~~~~~~~~~~~a~~~~~l~~~~-~~---l-~~~~~~~~~~~~~~~~L~~-~~---g~-~~~~~~~g~~~~~~  342 (343)
                      .+-++..+.|..- ...+.+.. .+   + ++++.++-+.+.+.+.|++ +.   |+ .|..|+||+|++++
T Consensus       282 ~tIgpdKvNQLRH-vrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld  352 (425)
T PF12897_consen  282 QTIGPDKVNQLRH-VRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLD  352 (425)
T ss_dssp             H-S---HHHHHHH-HHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEE
T ss_pred             ceeCccHHHHHHH-HHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEe
Confidence            2557788998777 55555433 22   2 2666777777777777654 43   34 48899999999986

; PDB: 3D6K_C 3EZ1_A 3PPL_B.

>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme

Probab=99.89  E-value=1.8e-21  Score=177.80  Aligned_cols=257  Identities=15%  Similarity=0.096  Sum_probs=176.3

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~  114 (343)
                      .++||-+..-.. .....+++++.++++++.++     |.   +.+++++++.+++.+.+|    .+++++++|+++++.
T Consensus         8 ~~~ina~g~~t~-~g~s~~~~~v~~a~~~~~~~-----~~---~~~~~~~~~~~~~a~~~g----~~~~~~~~g~t~al~   74 (363)
T TIGR01437         8 KKVINASGKMTI-LGVSTVSDEVADAQKRGAQN-----YF---EIKELVNKTGEYIANLLG----VEDAVIVSSASAGIA   74 (363)
T ss_pred             ceEEECCcEeec-CCCCCCCHHHHHHHHHHHhc-----CC---CHHHHHHHHHHHHHHhhC----CCeEEEEcCHHHHHH
Confidence            456666544422 22344789999999998652     32   345777777777776554    458899999999999


Q ss_pred             HHHHHhcCCCC---------------eEEEeCCCCcch----HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCce
Q 019298          115 VAMALLSRPGA---------------NILLPRPGFPIY----ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTV  175 (343)
Q Consensus       115 ~~~~~l~~~gd---------------~vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~  175 (343)
                      .++.+++++||               .|+++.|.|..|    ...+...|++++.++.    ++.+|+++++++++++++
T Consensus        75 ~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~----~~~~d~~~le~ai~~~t~  150 (363)
T TIGR01437        75 QSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGY----ANECSAEQLEAAITEKTA  150 (363)
T ss_pred             HHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcC----CCCCCHHHHHHhcChhce
Confidence            99999999988               999999888766    4566778999988865    245999999999998888


Q ss_pred             EEE-EeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE
Q 019298          176 ALV-IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL  254 (343)
Q Consensus       176 ~i~-~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~  254 (343)
                      +++ +++|+||+|.+.+   +++|+++|++||+++|+|++|+...      ..+..+   +..+++.|++|.+  +|++.
T Consensus       151 ai~~v~~~~~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~~~------~~~~~~---g~D~~~~S~~K~l--~gp~~  216 (363)
T TIGR01437       151 AILYIKSHHCVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEEDL------QKYYRL---GADLVIYSGAKAI--EGPTS  216 (363)
T ss_pred             EEEEEecCCCCcCCcCC---HHHHHHHHHHcCCeEEEECCCCCch------HHHHHc---CCCEEEEeCCccc--CCCce
Confidence            766 5788999999866   4667889999999999999997211      111112   2238889999984  67789


Q ss_pred             EEEEEeCCCCCCCchHHHHHHhhhhccc---cCcchHHHHHHHhccchhhHHHH-HHHHHHHHHHHHHHHhhcCCCCcee
Q 019298          255 GWFVTTDPCGMFRKPKVVERMKKYFDIL---GDPATFIQVCIMYGCLSTIMQIM-IHGNFLENFAGSCVPSYKLIPELIN  330 (343)
Q Consensus       255 G~i~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~a~~~~~l~~~~~~l-~~~~~~~~~~~~~~~~L~~~~g~~~  330 (343)
                      |+++++        +++++.++......   ..........+ .+++....+.. +..+.+.++++.+.+.|.++||+.+
T Consensus       217 G~l~~~--------~~~i~~~~~~~~~~~~~~~~~~~~~~gl-~aAl~~~~~~~~~~~~~~~~~~~~l~~~L~~i~g~~~  287 (363)
T TIGR01437       217 GLVLGK--------KKYIEWVKLQSKGIGRAMKVGKENILGL-TAALEQYLSTGKESGAEMVAKLTPFIEALNTLKGVSA  287 (363)
T ss_pred             EEEEEc--------HHHHHHHHhccCCCcceeccCHHHHHHH-HHHHHHHHccCcccHHHHHHHHHHHHHHHhcCCCeEE
Confidence            998874        35666654332110   01111111122 22222111111 1455556677789999999999885


Q ss_pred             e
Q 019298          331 F  331 (343)
Q Consensus       331 ~  331 (343)
                      .
T Consensus       288 ~  288 (363)
T TIGR01437       288 S  288 (363)
T ss_pred             E
Confidence            4

This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.

>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family

Probab=99.89  E-value=2.6e-21  Score=177.21  Aligned_cols=250  Identities=16%  Similarity=0.124  Sum_probs=170.1

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCC-CCCHHHHHHHHHHHhhhCCCCCCC-CcEEEecChHHHHHHHHHHhcCCCCeEE
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAPT-AGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANIL  128 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~vl  128 (343)
                      .+.++.+.+++.+.+.   .+.|+.. .-..++++.+++++      ++++ +.+++++|+++++..++.++..+||+|+
T Consensus         8 ~~~~~~v~~a~~~~~~---~~~~~~~~~~~~~~~~~la~~~------g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl   78 (356)
T cd06451           8 SNVPPRVLKAMNRPML---GHRSPEFLALMDEILEGLRYVF------QTENGLTFLLSGSGTGAMEAALSNLLEPGDKVL   78 (356)
T ss_pred             cCCCHHHHHHhCCCcc---CCCCHHHHHHHHHHHHHHHHHh------cCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEE
Confidence            5677888888865432   1223221 11346677777777      3334 4577888889999999999999999999


Q ss_pred             EeCCCCcc--hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHhhc
Q 019298          129 LPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKL  205 (343)
Q Consensus       129 ~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~  205 (343)
                      ++.++|..  +...++..|.+++.++.++  ++.+|++++++.+++ +++++++++|+||||..++   +++|.++|+++
T Consensus        79 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~---~~~i~~~a~~~  153 (356)
T cd06451          79 VGVNGVFGDRWADMAERYGADVDVVEKPW--GEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNP---LEGIGALAKKH  153 (356)
T ss_pred             EecCCchhHHHHHHHHHhCCCeEEeecCC--CCCCCHHHHHHHHhccCCCEEEEeccCCCcccccC---HHHHHHHHHhc
Confidence            99988765  4567788899999998754  357899999999986 8899999999999999976   56678888899


Q ss_pred             CcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh---hh---
Q 019298          206 KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK---YF---  279 (343)
Q Consensus       206 ~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~---~~---  279 (343)
                      |+++++|++|...   .. +..+...   +..+++.|++|.|+.+ .++||++.++        ++++++..   ..   
T Consensus       154 ~~~li~D~~~~~g---~~-~~~~~~~---~~d~~~~s~~K~l~~p-~g~G~l~~~~--------~~~~~~~~~~~~~~~~  217 (356)
T cd06451         154 DALLIVDAVSSLG---GE-PFRMDEW---GVDVAYTGSQKALGAP-PGLGPIAFSE--------RALERIKKKTKPKGFY  217 (356)
T ss_pred             CCEEEEeeehhcc---Cc-ccccccc---CccEEEecCchhccCC-CCcceeEECH--------HHHHHHHhcCCCCcee
Confidence            9999999998641   11 1122211   2236778899998765 3589998853        45555542   00   


Q ss_pred             --------------ccccCcchHHHHHHHhccchhhH-H-HHHHHHHHHHHHHHHHHhhcCCCCceeeC
Q 019298          280 --------------DILGDPATFIQVCIMYGCLSTIM-Q-IMIHGNFLENFAGSCVPSYKLIPELINFK  332 (343)
Q Consensus       280 --------------~~~~~~~~~~~~a~~~~~l~~~~-~-~l~~~~~~~~~~~~~~~~L~~~~g~~~~~  332 (343)
                                    .....++...+.++ .+++.... . +-+..++.+++++.+.+.|..+ |+.+..
T Consensus       218 ~~~~~~~~~~~~~~~~~~t~~~~~~~a~-~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~  284 (356)
T cd06451         218 FDLLLLLKYWGEGYSYPHTPPVNLLYAL-REALDLILEEGLENRWARHRRLAKALREGLEAL-GLKLLA  284 (356)
T ss_pred             ecHHHHHhhhcccCCCCCCChHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeecc
Confidence                          01112333333333 33332211 1 1226777888889999999887 777543

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.

>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase

Probab=99.89  E-value=2.9e-21  Score=179.52  Aligned_cols=165  Identities=21%  Similarity=0.193  Sum_probs=133.1

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchH----HHHHhcC
Q 019298           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRH  145 (343)
Q Consensus        70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g  145 (343)
                      +++|+. +...+|++.+|++++        .+..++++++++++..++.+++++||+|+++.+.|++..    ..+...|
T Consensus        51 ysr~~~-p~~~~le~~lA~l~g--------~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G  121 (418)
T TIGR01326        51 YSRLMN-PTTDVLEQRIAALEG--------GVAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLG  121 (418)
T ss_pred             eECCCC-hhHHHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcC
Confidence            345554 346789999999982        357889999999999999999999999999999996543    3456678


Q ss_pred             ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (343)
Q Consensus       146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~  225 (343)
                      .+++.++.       .|++++++++++++++|++++|+||+|.+.+   +++|+++|+++|+++|+|++|+.....    
T Consensus       122 ~~v~~v~~-------~d~~~l~~~l~~~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~~----  187 (418)
T TIGR01326       122 IEVRFVDP-------DDPEEFEKAIDENTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYLC----  187 (418)
T ss_pred             cEEEEECC-------CCHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhcC----
Confidence            88888763       1789999999888999999999999999964   778888899999999999999753211    


Q ss_pred             CcccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298          226 VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (343)
Q Consensus       226 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~  261 (343)
                      .+   + ..+..+++.|+||.++++|+|+||++++.
T Consensus       188 ~~---l-~~g~Divv~S~sK~l~g~G~~lGg~v~~~  219 (418)
T TIGR01326       188 RP---I-DHGADIVVHSATKYIGGHGTAIGGVIVDG  219 (418)
T ss_pred             Cc---h-hcCCeEEEECccccccCCccceEEEEEec
Confidence            11   1 12456999999999999999999999864

This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.

>PRK09028 cystathionine beta-lyase; Provisional

Probab=99.89  E-value=4.5e-21  Score=175.38  Aligned_cols=243  Identities=16%  Similarity=0.068  Sum_probs=172.3

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEE
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAP--TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANIL  128 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl  128 (343)
                      ++.++.+.++......  ....|..  .+....|++++|++.        ..+++++++|+++|+..++.+++++||+|+
T Consensus        35 ~~~~~~~~~~~~~~~~--~~~~Y~r~~npt~~~Le~~iA~le--------~~~~~~~~~sG~~Ai~~~l~all~~GD~Vv  104 (394)
T PRK09028         35 FDTVAEMRHAAKNRAN--GEMFYGRRGTPTHFAFQAAIVELE--------GGAGTALYPSGAAAISNALLSFLKAGDHLL  104 (394)
T ss_pred             cCCHHHHHHHhccCcc--CCceecCCCCchHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEE
Confidence            4455555554432211  1124665  234569999999886        235789999999999999999999999999


Q ss_pred             EeCCCCcchHHHH----HhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298          129 LPRPGFPIYELSA----AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (343)
Q Consensus       129 ~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~  204 (343)
                      +++|.|.++...+    ...|.++..++..       +.+.+++.+++++++|++++|+||||.+   .++++|+++|++
T Consensus       105 v~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~-------~~e~l~~~l~~~TklV~lespsNPtg~v---~dl~~I~~la~~  174 (394)
T PRK09028        105 MVDSCYEPTRDLCDKILKGFGIETTYYDPM-------IGEGIRELIRPNTKVLFLESPGSITMEV---QDVPTLSRIAHE  174 (394)
T ss_pred             EECCCcHHHHHHHHHhhhhcceEEEEECCC-------CHHHHHHhcCcCceEEEEECCCCCCCcH---HHHHHHHHHHHH
Confidence            9999997776533    4467777665421       4578888888889999999999999888   889999999999


Q ss_pred             cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhhhc-cc
Q 019298          205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFD-IL  282 (343)
Q Consensus       205 ~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~  282 (343)
                      +|+++|+|++|+....    ..++    ..+-.+++.|.+|.++.+| ...|++ +.+       +++.++++.... ..
T Consensus       175 ~g~~lvvD~t~a~p~~----~~Pl----~~GaDivv~S~tK~l~Gh~d~~~G~~-~~~-------~~~~~~l~~~~~~~G  238 (394)
T PRK09028        175 HDIVVMLDNTWASPIN----SRPF----EMGVDISIQAATKYIVGHSDVMLGTA-TAN-------EKHWDQLREHSYLMG  238 (394)
T ss_pred             cCCEEEEECCcccccc----CCcc----ccCceEEEEeCCeEecCCCCEEEEEE-ECC-------HHHHHHHHHHHHhcC
Confidence            9999999999986321    1111    1234499999999998876 555554 432       345565654432 24


Q ss_pred             cCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          283 GDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       283 ~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      ...++.....+ ..-|   ..+--+.++..++...+.++|+++|.+. ++.|
T Consensus       239 ~~~~p~~a~l~-~rgl---~TL~lR~~~~~~na~~la~~L~~~p~v~~V~yP  286 (394)
T PRK09028        239 QCTSPDDVYLA-MRGL---RTLGVRLAQHEKNALKVANWLATRPEVDHVRHP  286 (394)
T ss_pred             CCCCHHHHHHH-Hccc---CcHHHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence            46666665555 2222   2222288888899999999999988776 5555

>PRK02936 argD acetylornithine aminotransferase; Provisional

Probab=99.89  E-value=6.3e-21  Score=175.88  Aligned_cols=287  Identities=15%  Similarity=0.105  Sum_probs=190.5

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      ++++++||..|.-..+.+. .+|.+.+++.+++++..  ... .....++++.+++++.+..+    .+.++++++++++
T Consensus        27 ~G~~~lD~~s~~~~~~lG~-~~p~v~~a~~~~~~~~~--~~~-~~~~~~~~~~la~~l~~~~~----~~~~~~~~sG~~a   98 (377)
T PRK02936         27 NGKTYLDFTSGIAVCNLGH-CHPTVTKAVQEQLDDIW--HVS-NLFTNSLQEEVASLLAENSA----GDLVFFCNSGAEA   98 (377)
T ss_pred             CCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhcc--ccc-cccCCHHHHHHHHHHHhcCC----CCEEEEeCCcHHH
Confidence            3788999998874433333 78999999999987531  122 23457899999999976332    3689999999999


Q ss_pred             HHHHHHHhc-CCC-CeEEEeCCCCcchHHHH-HhcCceeE---EeecCCCCCCC--CCHHHHHhhhcCCceEEEEeCCCC
Q 019298          113 IDVAMALLS-RPG-ANILLPRPGFPIYELSA-AFRHIEVR---HFDLLPDKGWE--VDLDDIESLADQNTVALVIINPGN  184 (343)
Q Consensus       113 l~~~~~~l~-~~g-d~vl~~~p~~~~~~~~~-~~~g~~~~---~~~~~~~~~~~--~d~~~l~~~~~~~~~~i~~~~p~n  184 (343)
                      +..+++... -+| +.|++.+++|++..... ...+....   ..+..++..+.  -|++.+++.+.++++++++..+++
T Consensus        99 ~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~~  178 (377)
T PRK02936         99 NEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQG  178 (377)
T ss_pred             HHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEEecccC
Confidence            999998642 233 67899999887543322 22221110   11111100000  168999998887788888888889


Q ss_pred             Ccccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCC
Q 019298          185 PCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPC  263 (343)
Q Consensus       185 ptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~  263 (343)
                      ++|.. .+.+.+++|.++|++||+++|+||+|.++.+.+... ....+....++   .++||+++ +|+|+||++++   
T Consensus       179 ~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-~~~~~~~~~di---~t~sK~l~-~G~~ig~v~~~---  250 (377)
T PRK02936        179 EGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLF-AYEQFGLDPDI---VTVAKGLG-NGIPVGAMIGK---  250 (377)
T ss_pred             CCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh-HHHhhCCCCcE---EEEccccc-CCCccEEEEEc---
Confidence            99877 578999999999999999999999999876655421 21122212222   36999988 89999999985   


Q ss_pred             CCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC----CCCceeeCCCCceE
Q 019298          264 GMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL----IPELINFKSTGSSL  338 (343)
Q Consensus       264 ~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~----~~g~~~~~~~~g~~  338 (343)
                           +++.+.+.... ..+++.+++.++++ .++|+.. ...+.+++++++.+.+.+.|++    ++.+.... ..|++
T Consensus       251 -----~~~~~~~~~~~~~~t~~~~~~~~aaa-~a~l~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~-~~g~~  322 (377)
T PRK02936        251 -----KELGTAFGPGSHGSTFGGNPLAMAAA-KEVLQVI-KQPSFLEEVQEKGEYFLQKLQEELEHLECVKNIR-GKGLM  322 (377)
T ss_pred             -----HHHHhhccCCCCCCCCCCCHHHHHHH-HHHHHHH-HhccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEe-ecceE
Confidence                 36777775443 23456788888888 5555432 1112556667777777776665    33332222 35688


Q ss_pred             eeecC
Q 019298          339 KYLDL  343 (343)
Q Consensus       339 ~~~~l  343 (343)
                      +|+++
T Consensus       323 ~~i~~  327 (377)
T PRK02936        323 IGIEC  327 (377)
T ss_pred             EEEEe
Confidence            88864

>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein

Probab=99.89  E-value=8e-21  Score=175.24  Aligned_cols=262  Identities=14%  Similarity=0.080  Sum_probs=174.9

Q ss_pred             CCCcHHHHHHHHHHHhcCC----CCCCCC----CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC
Q 019298           51 FHTTHVATEAVAEALLSEK----FNGYAP----TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR  122 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~----~~~Y~~----~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~  122 (343)
                      +++++.+.+++.+.++...    ...|+.    ..+..++|+.++++++.     -..++|++++|+++++..++.++++
T Consensus        10 ~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-----~~~~~v~~~~g~t~al~~~~~~~~~   84 (376)
T TIGR01977        10 YPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNA-----PSSAHVVFTNNATTALNIALKGLLK   84 (376)
T ss_pred             CCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCc-----CCCCeEEEeCCHHHHHHHHHHhccC
Confidence            5678899999988876431    112332    13456888999988832     1335899999999999999999989


Q ss_pred             CCCeEEEeCCCCcchHH----HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHH
Q 019298          123 PGANILLPRPGFPIYEL----SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKL  198 (343)
Q Consensus       123 ~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l  198 (343)
                      +||+|++..++|..+..    .++..|.+++.++.+  .++.+|+++++++++++++++++++|+||||..++.   ++|
T Consensus        85 ~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~~---~~i  159 (376)
T TIGR01977        85 EGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCD--NEGLISPERIKRAIKTNTKLIVVSHASNVTGTILPI---EEI  159 (376)
T ss_pred             CCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecC--CCCCcCHHHHHHhcCCCCeEEEEECCCCCccccCCH---HHH
Confidence            99999999999977543    445568999888775  345689999999998889999999999999999874   567


Q ss_pred             HHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH--H--
Q 019298          199 AETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE--R--  274 (343)
Q Consensus       199 ~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~--~--  274 (343)
                      .++|+++|+++|+|++++....    +..+   ...+-.+++.|++|.++.+. ..|.+++++...+.  +....  .  
T Consensus       160 ~~l~~~~~~~livD~a~~~g~~----~~~~---~~~~~D~~~~s~~K~l~~p~-g~g~l~~~~~~~~~--~~~~~~~~~~  229 (376)
T TIGR01977       160 GELAQENGIFFILDAAQTAGVI----PIDM---TELAIDMLAFTGHKGLLGPQ-GTGGLYIREGIKLK--PLKSGGTGSH  229 (376)
T ss_pred             HHHHHHcCCEEEEEhhhccCcc----CCCc---hhcCCCEEEecccccccCCC-CceEEEEcCCcCcC--ceecCCCccc
Confidence            8888999999999999986332    1111   11223488999999976542 35766665543111  00000  0  


Q ss_pred             ---H---hhh--hccccCcchHHHHHHHhccchhhHHH--HHHHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298          275 ---M---KKY--FDILGDPATFIQVCIMYGCLSTIMQI--MIHGNFLENFAGSCVPSYKLIPELINFKS  333 (343)
Q Consensus       275 ---l---~~~--~~~~~~~~~~~~~a~~~~~l~~~~~~--l~~~~~~~~~~~~~~~~L~~~~g~~~~~~  333 (343)
                         +   +..  +...+.++.....++ ..+++...+.  -..+++.++..+.+.+.|.+++|+.+..+
T Consensus       230 ~~~~~~~~~~~~r~~~~t~~~~~~~a~-~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~  297 (376)
T TIGR01977       230 SALIDQPSELPDRFESGTLNTPGIAGL-NAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGP  297 (376)
T ss_pred             cccccccccchhhccCCCCCHHHHHHH-HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCC
Confidence               0   000  000123333333333 3333211111  11677788888899999988878886543

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.

>PRK07582 cystathionine gamma-lyase; Validated

Probab=99.89  E-value=3e-21  Score=176.47  Aligned_cols=219  Identities=19%  Similarity=0.178  Sum_probs=158.6

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH----HhcC
Q 019298           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRH  145 (343)
Q Consensus        70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~g  145 (343)
                      +.+|+. .....|+++++++.        . ++.++++++++++..++.+++++||+|+++.|+|..+...+    ...|
T Consensus        45 y~ry~~-p~~~~Le~~lA~l~--------~-~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G  114 (366)
T PRK07582         45 YGRASN-PTWRALEAALGELE--------G-AEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLG  114 (366)
T ss_pred             eECCCC-ccHHHHHHHHHHHc--------C-CCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCe
Confidence            556665 57899999999987        2 35556666678999999999999999999999998876654    3468


Q ss_pred             ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (343)
Q Consensus       146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~  225 (343)
                      .+++.++....      .+    .+.++++++++++|+||||.+   .++++|+++|+++|+++|+|++|....  +.. 
T Consensus       115 ~~v~~v~~~~~------~~----~~~~~t~lV~le~p~NPtg~v---~di~~I~~~a~~~g~~lvVD~t~~~~~--~~~-  178 (366)
T PRK07582        115 VTVREAPTAGM------AE----AALAGADLVLAETPSNPGLDV---CDLAALAAAAHAAGALLVVDNTTATPL--GQR-  178 (366)
T ss_pred             EEEEEECCCCh------HH----HhccCceEEEEECCCCCCCCc---cCHHHHHHHHHHcCCEEEEECCCCCcc--ccC-
Confidence            88888865321      11    223478899999999999987   468888999999999999999996421  111 


Q ss_pred             CcccccCCCCCEEEEccCccccCC-CCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHH
Q 019298          226 VPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQ  303 (343)
Q Consensus       226 ~~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~  303 (343)
                       ++. +.   ..++++|+||.++. +|.|+||+++++       ++++++++..+.. ...++++....+ ...|..   
T Consensus       179 -p~~-~g---~Divv~S~sK~l~G~~g~~~G~v~~~~-------~~l~~~l~~~~~~~g~~~~~~~a~l~-~r~l~t---  242 (366)
T PRK07582        179 -PLE-LG---ADLVVASDTKALTGHSDLLLGYVAGRD-------PELMAAVERWRLLAGAIPGPFEAWLA-HRSLGT---  242 (366)
T ss_pred             -chh-cC---CcEEEecccccccCCCCeeEEEEEcCc-------HHHHHHHHHHHHHhCCCCCHHHHHHH-Hhcccc---
Confidence             111 22   23889999999865 679999998753       4677777765543 345566666555 333322   


Q ss_pred             HHH-HHHHHHHHHHHHHHhhcCCCCce-ee
Q 019298          304 IMI-HGNFLENFAGSCVPSYKLIPELI-NF  331 (343)
Q Consensus       304 ~l~-~~~~~~~~~~~~~~~L~~~~g~~-~~  331 (343)
                       ++ +.++..++...+.+.|+++|.+. +.
T Consensus       243 -l~~R~~~~~~na~~la~~L~~~p~v~~v~  271 (366)
T PRK07582        243 -LGLRFARQCANALAVAELLAGHPAVRGVR  271 (366)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHhCCCccEEE
Confidence             22 55777789999999999888776 44

>PRK07269 cystathionine gamma-synthase; Reviewed

Probab=99.88  E-value=6.2e-21  Score=173.77  Aligned_cols=235  Identities=16%  Similarity=0.142  Sum_probs=168.0

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeE
Q 019298           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVR  149 (343)
Q Consensus        70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~  149 (343)
                      +.+|+. +...+|+++++++.        ..+++++++|+++|+..++. ++++||+|+++.+.|......+....... 
T Consensus        48 Y~R~~~-p~~~~le~~lA~le--------g~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~-  116 (364)
T PRK07269         48 YTRTKN-PTRAKLEETLAAIE--------SADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEG-  116 (364)
T ss_pred             eeCCCC-ccHHHHHHHHHHHh--------CCCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcC-
Confidence            445555 46789999999998        46799999999999999984 56899999999999976554333221110 


Q ss_pred             EeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccc
Q 019298          150 HFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG  229 (343)
Q Consensus       150 ~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~  229 (343)
                      .+..    .+..|++++++++++++++|++++|+||||.+.   ++++|+++|+++|+++|+|++|....+.    .++.
T Consensus       117 ~~~~----~~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~---di~~I~~la~~~gi~vvvD~t~~~~~~~----~pl~  185 (364)
T PRK07269        117 RFHF----TYANTEEELIAAIEEDTDIVYIETPTNPLMVEF---DIEKVAKLAHAKGAKVIVDNTFYSPIYQ----RPIE  185 (364)
T ss_pred             cEEE----EecCCHHHHHHhcCcCceEEEEECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCcccccC----Cchh
Confidence            0110    133589999999988999999999999999984   7888899999999999999998653221    1121


Q ss_pred             ccCCCCCEEEEccCccccCCCCC-cEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHHH
Q 019298          230 VFGSTVPILTLGSLSKRWIVPGW-RLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMIH  307 (343)
Q Consensus       230 ~~~~~~~~i~~~S~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~  307 (343)
                       .   +-.++++|++|.++.+|- -.|++++.+       +++.++++..+.. ....+++..+.+ ...|+.   +-.+
T Consensus       186 -~---gaDivv~S~tK~l~g~~d~~gG~v~~~~-------~~l~~~~~~~~~~~G~~~s~~~a~l~-~~~L~t---L~~r  250 (364)
T PRK07269        186 -L---GADIVLHSATKYLSGHNDVLAGVVVTND-------LELYEKLFYNLNTTGAVLSPFDSYLL-MRGLKT---LSLR  250 (364)
T ss_pred             -h---CCcEEEecCceeccCCCcccceEEEeCc-------HHHHHHHHHHHHHhCCCCCHHHHHHH-HcCCCc---HHHH
Confidence             1   233999999999987664 356666643       3577777655432 345566666555 444432   3336


Q ss_pred             HHHHHHHHHHHHHhhcCCCCce-ee-CCCCceEeee
Q 019298          308 GNFLENFAGSCVPSYKLIPELI-NF-KSTGSSLKYL  341 (343)
Q Consensus       308 ~~~~~~~~~~~~~~L~~~~g~~-~~-~~~~g~~~~~  341 (343)
                      .++.+++...+.++|+.+|++. +. ++.||++-|.
T Consensus       251 ~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~  286 (364)
T PRK07269        251 MERSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFK  286 (364)
T ss_pred             HHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEE
Confidence            7777888889999999988866 44 6677776553

>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase

Probab=99.88  E-value=3.9e-21  Score=179.80  Aligned_cols=270  Identities=17%  Similarity=0.118  Sum_probs=180.1

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA-PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++.++|+..|..... .-..+|.+.+++++++.+..  .|. +..+..+|++++++++..       .++|++++|+++
T Consensus        46 dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~--~~~~~~~~~~~lae~l~~~~~~-------~~~v~~~~sGse  115 (423)
T TIGR00713        46 DGNEYIDYVLSWGPLI-LGHAHPRVVEAVKEALERGT--SYGAPTEAEILLAKEIISRVPS-------VEMVRFVNSGTE  115 (423)
T ss_pred             CCCEEEEccccccccc-cCCCCHHHHHHHHHHHHhCC--cCCCCCHHHHHHHHHHHHhCCc-------ccEEEEeCCHHH
Confidence            3888999998875521 12378999999999997653  233 445778999999998731       369999999999


Q ss_pred             HHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhc---CceeEEeecCCC-------CCC---CCCHHHHHhhhc---CC
Q 019298          112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFR---HIEVRHFDLLPD-------KGW---EVDLDDIESLAD---QN  173 (343)
Q Consensus       112 al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~---g~~~~~~~~~~~-------~~~---~~d~~~l~~~~~---~~  173 (343)
                      ++..+++...  ...++|+..+++|+++...+...   +......+..+.       +..   .-|++++++.+.   ++
T Consensus       116 A~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~  195 (423)
T TIGR00713       116 ATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEE  195 (423)
T ss_pred             HHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCc
Confidence            9999988643  24589999999999875433321   111111111000       000   027899998886   35


Q ss_pred             ceEEEEe-CCCCCcccccC-HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCC
Q 019298          174 TVALVII-NPGNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG  251 (343)
Q Consensus       174 ~~~i~~~-~p~nptG~~~~-~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G  251 (343)
                      +.++++. .++| +|.+.+ .+.+++|.++|++||+++|+||+|.++.++......  .+....+   +.+|||.++ +|
T Consensus       196 ~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~--~~~~~pD---i~t~sK~l~-~G  268 (423)
T TIGR00713       196 IAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQE--YFGVEPD---LTTLGKIIG-GG  268 (423)
T ss_pred             EEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHH--HhCCCcc---hhhhhhhhc-CC
Confidence            5666664 6677 788877 689999999999999999999999988543221111  1121122   337999987 89


Q ss_pred             CcEEEEEEeCCCCCCCchHHHHHHhhh----hccccCcchHHHHHHHhccchhhH--HHHH-HHHHHHHHHHHHHHhhcC
Q 019298          252 WRLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQVCIMYGCLSTIM--QIMI-HGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       252 ~r~G~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~~l~~~~--~~l~-~~~~~~~~~~~~~~~L~~  324 (343)
                      +|+||++++        +++.+.+...    ...+++.++++++++ .+.|+...  .+.+ .++..++.++.+.+.+++
T Consensus       269 ~pig~v~~~--------~~i~~~~~~~~~~~~~~T~~~~~~~~aaa-~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  339 (423)
T TIGR00713       269 LPVGAFGGR--------REIMERLAPEGPVYQAGTLSGNPLAMAAG-LATLKLLDEEGVYTELDELAKRLAEGLSEVLED  339 (423)
T ss_pred             CceeeeeEH--------HHHHHhhCcCCCeeeccCCCCCHHHHHHH-HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999995        3677777532    223457788888887 55554221  1333 555555666666666666


Q ss_pred             CCCce
Q 019298          325 IPELI  329 (343)
Q Consensus       325 ~~g~~  329 (343)
                      + ++.
T Consensus       340 ~-~~~  343 (423)
T TIGR00713       340 T-GIP  343 (423)
T ss_pred             c-CCC
Confidence            6 444

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.

>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase

Probab=99.88  E-value=1.4e-20  Score=172.21  Aligned_cols=259  Identities=12%  Similarity=0.078  Sum_probs=173.9

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC--cEEEecChHHHHHHHHHHhcCCCCeEE
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGANIL  128 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~--~i~~~~g~~~al~~~~~~l~~~gd~vl  128 (343)
                      ..+++.+++++...... ....|.  .-...+|+.+++++      +++++  .|++++|+++++..++.++..++|+|+
T Consensus         8 ~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~la~~~------~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi   78 (355)
T TIGR03301         8 LSTSATVRDAMLVDWCH-WDSEFN--DVTDQVRDRLLALA------GGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLL   78 (355)
T ss_pred             CCCCHHHHHHhhhhccC-CCHHHH--HHHHHHHHHHHHHh------cCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEE
Confidence            45778888888773221 111232  23456777777777      33443  677899999999999999988888877


Q ss_pred             EeCCCC-cc-hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC--CceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298          129 LPRPGF-PI-YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--NTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (343)
Q Consensus       129 ~~~p~~-~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~  204 (343)
                      +..+.+ +. +...++..|.+++.++.+  .++.+|++++++.+++  +.+.+++++++||||...+   +++|+++|++
T Consensus        79 ~~~~~~~~~~~~~~a~~~g~~~~~i~~~--~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~  153 (355)
T TIGR03301        79 VLINGAYGERLAKICEYLGIPHTDLNFS--EYEPPDLNRIEEALAADPDITHVATVHHETTTGILNP---LEAIAKVARS  153 (355)
T ss_pred             EECCCchhhHHHHHHHHcCCceEEEecC--CCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhH---HHHHHHHHHH
Confidence            666554 43 456778889999988764  3467899999998864  3456778889999999954   7888999999


Q ss_pred             cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCcccc-CCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-----
Q 019298          205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-----  278 (343)
Q Consensus       205 ~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-----  278 (343)
                      |++++|+|++++...   . +..+..   .+..++++|++|.+ +.+|  +||+++++        ++++.+...     
T Consensus       154 ~~~~livD~~~s~g~---~-~~~~~~---~~~d~~~~s~~K~l~~~~G--~g~~~~~~--------~~~~~~~~~~~~~~  216 (355)
T TIGR03301       154 HGAVLIVDAMSSFGA---I-PIDIEE---LDVDALIASANKCLEGVPG--FGFVIARR--------DLLEASAGNARSLY  216 (355)
T ss_pred             cCCEEEEEeccccCC---c-ccchhh---cCccEEEecCCcccccCCc--eeEEEECH--------HHHHHhhCCCCCce
Confidence            999999998776422   1 112222   23448899999986 4456  79999853        566665421     


Q ss_pred             -------------hccccCcchHHHHHHHhccchhhH--H-HHHHHHHHHHHHHHHHHhhcCCCCceeeCC---CCceEe
Q 019298          279 -------------FDILGDPATFIQVCIMYGCLSTIM--Q-IMIHGNFLENFAGSCVPSYKLIPELINFKS---TGSSLK  339 (343)
Q Consensus       279 -------------~~~~~~~~~~~~~a~~~~~l~~~~--~-~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~---~~g~~~  339 (343)
                                   ....+.++...+.++ ..++....  . +-+.+++++++++++.+.|+++ |+.+..+   .+++++
T Consensus       217 ~~~~~~~~~~~~~~~~~~t~~~~~~~a~-~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~~~~~~~~~~~  294 (355)
T TIGR03301       217 LDLYDQWAYMEKTGKWRFTPPTHTVYAF-AQALEELEAEGGVPARIARYRRNRELLVDGLRAL-GFQPLLPERWQSPIIV  294 (355)
T ss_pred             eeHHHHHHHhhhcCCCCCCCcHHHHHHH-HHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCCCCcEE
Confidence                         001224455555554 33333211  1 2337778899999999999887 7774333   245566


Q ss_pred             eec
Q 019298          340 YLD  342 (343)
Q Consensus       340 ~~~  342 (343)
                      |++
T Consensus       295 ~~~  297 (355)
T TIGR03301       295 SFL  297 (355)
T ss_pred             EEE
Confidence            654

This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.

>PRK00011 glyA serine hydroxymethyltransferase; Reviewed

Probab=99.88  E-value=2.1e-20  Score=174.57  Aligned_cols=276  Identities=15%  Similarity=0.094  Sum_probs=174.7

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC-----CCCCCC-CCCCHHHHH----HHHHHHhhhCCCCCCCCcE
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-----FNGYAP-TAGLPLTRR----AIAEYLSRDLPYKLTPNDV  103 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~Y~~-~~g~~~lr~----~ia~~~~~~~~~~~~~~~i  103 (343)
                      .+..++|+.+.      .++++.+++++...+....     ...|.. ..-...+.+    .+++++    |  .+..+|
T Consensus        24 ~~~~~~l~~~~------n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~----g--~~~~~i   91 (416)
T PRK00011         24 QEEHIELIASE------NFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELF----G--AEYANV   91 (416)
T ss_pred             HhcCeeeeccc------CcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHh----C--CCceee
Confidence            56779999887      2368899998876643211     011111 111222333    445554    3  344556


Q ss_pred             EEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH-----HHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEE
Q 019298          104 FVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS-----AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVAL  177 (343)
Q Consensus       104 ~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i  177 (343)
                      ++++| ++++..++.+++++||+|+++.|+|..+...     ....|.+++.++++. +++.+|++++++.+++ +++++
T Consensus        92 ~~~sg-t~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~k~v  169 (416)
T PRK00011         92 QPHSG-SQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDE-ETGLIDYDEVEKLALEHKPKLI  169 (416)
T ss_pred             ecCCc-hHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCc-ccCCcCHHHHHHHHHhcCCCEE
Confidence            66554 7799999999999999999999999764321     123356677776643 3467999999999864 78888


Q ss_pred             EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCc-cccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEE
Q 019298          178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW  256 (343)
Q Consensus       178 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~  256 (343)
                      +++.++++  ..   .++++|+++|+++|+++|+|++|.. +.+.+..+..+.     ...++++|+||++  +|.|.||
T Consensus       170 ~~~~~~~~--~~---~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-----~~di~~~S~~K~l--~g~~gg~  237 (416)
T PRK00011        170 IAGASAYS--RP---IDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-----HADVVTTTTHKTL--RGPRGGL  237 (416)
T ss_pred             EECCCcCC--Cc---cCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-----CCcEEEecCCcCC--CCCCceE
Confidence            87765554  33   3578889999999999999999864 222222111221     1238899999985  7888999


Q ss_pred             EEEeCCCCCCCchHHHHHHhhhhccc-c-CcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeC-
Q 019298          257 FVTTDPCGMFRKPKVVERMKKYFDIL-G-DPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFK-  332 (343)
Q Consensus       257 i~~~~~~~~~~~~~~~~~l~~~~~~~-~-~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~-  332 (343)
                      +++++       ++++++++...... . .+......++..+++....++++ .+++++++++.+.+.|+++ |+.+.. 
T Consensus       238 i~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~  309 (416)
T PRK00011        238 ILTND-------EELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSG  309 (416)
T ss_pred             EEeCC-------HHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeec
Confidence            99853       35778777664321 1 22222233321222221122333 7888999999999999987 787532 


Q ss_pred             CCCceEeeecC
Q 019298          333 STGSSLKYLDL  343 (343)
Q Consensus       333 ~~~g~~~~~~l  343 (343)
                      ...++++|+++
T Consensus       310 ~~~~~~~~i~~  320 (416)
T PRK00011        310 GTDNHLVLVDL  320 (416)
T ss_pred             CCCCeEEEEeC
Confidence            23358888753

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional

Probab=99.88  E-value=1.1e-20  Score=175.08  Aligned_cols=284  Identities=14%  Similarity=0.059  Sum_probs=181.2

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      ++.++||..|.-..  .++ .+|.+.++++++++.... ..+.......+|.+.++++.        ..+.+++++++++
T Consensus        39 G~~~lD~~~g~~~~--~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~SGse  108 (396)
T PRK04073         39 GNRYMDMLSAYSAV--NQGHRHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLT--------GKDMVLPMNTGAE  108 (396)
T ss_pred             CCEEEEcCCCHHhc--cCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcC--------CCCeEEEcCChHH
Confidence            78899998776331  233 789999999999875321 11111112234555555543        2469999999999


Q ss_pred             HHHHHHHHhcC---------CC-CeEEEeCCCCcchHHHH-HhcCceeEE---eecCCC--CCCCCCHHHHHhhhcCCce
Q 019298          112 AIDVAMALLSR---------PG-ANILLPRPGFPIYELSA-AFRHIEVRH---FDLLPD--KGWEVDLDDIESLADQNTV  175 (343)
Q Consensus       112 al~~~~~~l~~---------~g-d~vl~~~p~~~~~~~~~-~~~g~~~~~---~~~~~~--~~~~~d~~~l~~~~~~~~~  175 (343)
                      |+..+++....         +| ++|+..+-+|++....+ ...+.....   .+..+.  ...-.|++.+++.++++++
T Consensus       109 A~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~  188 (396)
T PRK04073        109 AVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYGDLEALKAAITPNTA  188 (396)
T ss_pred             HHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCCCHHHHHHhcccCeE
Confidence            99999987631         33 67887777776544332 222211000   000000  0001278999998877787


Q ss_pred             EEEEeCCCCCcccccCH-HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE
Q 019298          176 ALVIINPGNPCGNVYSY-QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL  254 (343)
Q Consensus       176 ~i~~~~p~nptG~~~~~-~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~  254 (343)
                      +++++.++||+|.+++. +.+++|.++|++||+++|+||+|.++...+... .........+   +.++||.++++|+|+
T Consensus       189 ~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~-~~~~~~~~pd---i~~~sK~lg~gg~~i  264 (396)
T PRK04073        189 AFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLF-ACDWDNVTPD---MYILGKALGGGVFPI  264 (396)
T ss_pred             EEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHH-HhhhcCCCCC---EEEecccccCCCCcc
Confidence            77777779999999875 469999999999999999999999876554321 1111111122   235799999999999


Q ss_pred             EEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCC--CCceee
Q 019298          255 GWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLI--PELINF  331 (343)
Q Consensus       255 G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~--~g~~~~  331 (343)
                      ||++++        +++++.+.... ..+++.+++.++++ .+.|+...+ ....++.+++++.+.+.|+++  +++...
T Consensus       265 g~~~~~--------~~i~~~~~~~~~~~t~~~~~~~~aaa-~aaL~~~~~-~~l~~~~~~~~~~l~~~L~~l~~~~i~~~  334 (396)
T PRK04073        265 SCVAAN--------RDILGVFTPGSHGSTFGGNPLACAVS-IAALEVLEE-EKLPERSLELGEYFKEQLKEIDNPMIKEV  334 (396)
T ss_pred             eEEEEc--------HHHHhhhcCCCCCCCCCCCHHHHHHH-HHHHHHHHh-cCHHHHHHHHHHHHHHHHHhhcCCcccce
Confidence            999985        36777775432 23556788888887 555542111 115567777888888888775  233332


Q ss_pred             CCCCceEeeec
Q 019298          332 KSTGSSLKYLD  342 (343)
Q Consensus       332 ~~~~g~~~~~~  342 (343)
                      .+. |.|++++
T Consensus       335 ~~~-g~~~~~~  344 (396)
T PRK04073        335 RGR-GLFIGVE  344 (396)
T ss_pred             ecc-eEEEEEE
Confidence            333 6667765

>TIGR02006 IscS cysteine desulfurase IscS

Probab=99.88  E-value=1.7e-20  Score=174.34  Aligned_cols=268  Identities=14%  Similarity=0.093  Sum_probs=180.4

Q ss_pred             eeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC--CC------CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC
Q 019298           37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGY--AP------TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (343)
Q Consensus        37 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y--~~------~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g  108 (343)
                      .+.|+.+.+     .+.++.+.+++...+.....+.+  ..      .....++|+.+++++      +.++++|++++|
T Consensus         4 ~~yld~aa~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~~~g   72 (402)
T TIGR02006         4 PIYLDYAAT-----TPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELI------GADSREIVFTSG   72 (402)
T ss_pred             cEEeeCCcC-----CCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCC
Confidence            367777763     35678899998887643211111  00      112455678888887      457889999999


Q ss_pred             hHHHHHHHHHHhc----CCCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeC
Q 019298          109 CTQAIDVAMALLS----RPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN  181 (343)
Q Consensus       109 ~~~al~~~~~~l~----~~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~  181 (343)
                      +++++..++.++.    ++||+|++..++|+.+...+   +..|.+++.++++  .++.+|++++++.++++++++++++
T Consensus        73 ~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~~~~~lv~v~~  150 (402)
T TIGR02006        73 ATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPK--SNGLIDLEELKAAIRDDTILVSIMH  150 (402)
T ss_pred             HHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhcCCCCEEEEEEC
Confidence            9999999887763    68999999999998765443   3458888888775  3456899999999988899999999


Q ss_pred             CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (343)
Q Consensus       182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~  261 (343)
                      ++||||...   ++++|.++|+++|+++++|++++...    .+..+..   .+-.+++.|.+|.+|.+|  +|++++++
T Consensus       151 ~~n~tG~~~---~~~~I~~l~~~~g~~livD~a~a~g~----~~~~~~~---~~~D~~~~s~~K~~gp~G--~G~l~~~~  218 (402)
T TIGR02006       151 VNNEIGVIQ---DIAAIGEICRERKVFFHVDAAQSVGK----IPINVNE---LKVDLMSISGHKIYGPKG--IGALYVRR  218 (402)
T ss_pred             CCcCceecc---cHHHHHHHHHHcCCEEEEEcchhcCC----cccCccc---cCCCEEEEehhhhcCCCc--eEEEEEcc
Confidence            999999995   46788889999999999999997532    1112221   223488899999876556  78888765


Q ss_pred             CCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceee
Q 019298          262 PCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINF  331 (343)
Q Consensus       262 ~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~  331 (343)
                      +......+ +.......... .+.++.....++ ..+++...+.++ ..+++++.++.+.+.|+.++++.+.
T Consensus       219 ~~~~~~~~-~~~g~~~~~~~~~gt~~~~~~~al-~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~  288 (402)
T TIGR02006       219 KPRVRLEA-LIHGGGHERGMRSGTLPTHQIVGM-GEAFRIAKEEMAQDTAHVLALRDRLLNGIKSIEEVYLN  288 (402)
T ss_pred             CCCCCCCc-eecCCCccCCccCCCccHHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence            32111111 10000000111 123333333333 445443333333 7788899999999999888887653

This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.

>cd06450 DOPA_deC_like DOPA decarboxylase family

Probab=99.88  E-value=2.7e-21  Score=176.28  Aligned_cols=250  Identities=14%  Similarity=0.080  Sum_probs=179.6

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC------------
Q 019298           55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR------------  122 (343)
Q Consensus        55 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~------------  122 (343)
                      ..+.+.+...+... ...|....+..++++++++++.+.+|.+...+++++|+|+++++..+++++..            
T Consensus        13 ~~~~~~~~~~~n~~-~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~   91 (345)
T cd06450          13 ALLLEMLTSAKNAI-DFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGR   91 (345)
T ss_pred             HHHHHHHHHhcCCC-CcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhccccc
Confidence            44455555554433 34588888999999999999998888664566899999999999999988742            


Q ss_pred             C--CCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCCCcccccCHHH
Q 019298          123 P--GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQH  194 (343)
Q Consensus       123 ~--gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~  194 (343)
                      +  +++|+++.++|..+...+...|.+++.++++++  +.+|+++|++.+++      +++++++++|+||||..   ++
T Consensus        92 ~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~---~~  166 (345)
T cd06450          92 GIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDED--GRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAI---DP  166 (345)
T ss_pred             ccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCC--CCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCC---CC
Confidence            2  348889999999998888888999999987643  47999999999876      67788889999999998   66


Q ss_pred             HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (343)
Q Consensus       195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~  274 (343)
                      +++|+++|+++|+++++|++|+.+.......... .....+-..+..|++|. +.++.++|++..             + 
T Consensus       167 ~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~~~~d~~~~s~~K~-l~~p~g~g~~~~-------------~-  230 (345)
T cd06450         167 LEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHL-DFGIERVDSISVDPHKY-GLVPLGCSAVLV-------------R-  230 (345)
T ss_pred             HHHHHHHHHHhCCeEEEechhhHHHhhChhhHHH-hcCccccCEEEEchhHh-hCCCcchHHHHH-------------H-
Confidence            8899999999999999999999876432211110 00001123567799997 445567787643             1 


Q ss_pred             HhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeC-CCCceEee
Q 019298          275 MKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFK-STGSSLKY  340 (343)
Q Consensus       275 l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~-~~~g~~~~  340 (343)
                                  ...+.+. ...+.. ..+.+.+++..+.++++.+.|.+++++.+.. ++.++..|
T Consensus       231 ------------~~~~~~~-l~~l~~-~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f  283 (345)
T cd06450         231 ------------ALKLWAT-LRRFGR-DGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCF  283 (345)
T ss_pred             ------------HHHHHHH-HHHHhH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEE
Confidence                        2222222 111111 2333477888889999999999988887543 55666554

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.

>PRK14012 cysteine desulfurase; Provisional

Probab=99.88  E-value=3.3e-20  Score=172.52  Aligned_cols=267  Identities=14%  Similarity=0.094  Sum_probs=174.4

Q ss_pred             eEeccCCCCCCCCCCCcHHHHHHHHHHHh--cCCCCCC--CC------CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298           38 ISLAMGDPTVHSCFHTTHVATEAVAEALL--SEKFNGY--AP------TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (343)
Q Consensus        38 i~l~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Y--~~------~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~  107 (343)
                      +.|+.+..     .+.++.+.+++.+.+.  ....+..  ..      .....++|+.+++++      +.+++++++++
T Consensus         5 iyld~a~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~------g~~~~~v~~~~   73 (404)
T PRK14012          5 IYLDYSAT-----TPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLI------GADPREIVFTS   73 (404)
T ss_pred             EEecCcCC-----CCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHc------CcCcCeEEEeC
Confidence            66776663     3567888999888765  2111000  00      112456788888887      45778899999


Q ss_pred             ChHHHHHHHHHHhc----CCCCeEEEeCCCCcchHHHHH---hcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEe
Q 019298          108 GCTQAIDVAMALLS----RPGANILLPRPGFPIYELSAA---FRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII  180 (343)
Q Consensus       108 g~~~al~~~~~~l~----~~gd~vl~~~p~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~  180 (343)
                      |+++++..++.++.    ++||+|++..++|+.+...+.   ..|.+++.++.+  .++.+|++++++++++++++++++
T Consensus        74 g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~--~~g~~d~~~l~~~i~~~t~lv~~~  151 (404)
T PRK14012         74 GATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQ--SNGIIDLEKLEAAMRDDTILVSIM  151 (404)
T ss_pred             CHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccC--CCCcCCHHHHHHhcCCCCEEEEEE
Confidence            99999999887763    789999999999987655443   358898888775  345689999999999899999999


Q ss_pred             CCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEe
Q 019298          181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT  260 (343)
Q Consensus       181 ~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~  260 (343)
                      +++||||.+.   ++++|.++|+++|+++|+|++++...    .+..+...   +-.+++.|++|.++..  ++|+++++
T Consensus       152 ~~~n~tG~~~---~~~~I~~la~~~g~~vivD~a~~~g~----~~~~~~~~---~~D~~~~s~~K~~gp~--g~G~l~~~  219 (404)
T PRK14012        152 HVNNEIGVIQ---DIAAIGEICRERGIIFHVDAAQSVGK----VPIDLSKL---KVDLMSFSAHKIYGPK--GIGALYVR  219 (404)
T ss_pred             CcCCCccchh---hHHHHHHHHHHcCCEEEEEcchhcCC----cccCcccC---CCCEEEEehhhccCCC--ceEEEEEe
Confidence            9999999995   56888899999999999999997522    11122222   2237888999976533  58998887


Q ss_pred             CCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhh-HHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298          261 DPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTI-MQIMIHGNFLENFAGSCVPSYKLIPELIN  330 (343)
Q Consensus       261 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~-~~~l~~~~~~~~~~~~~~~~L~~~~g~~~  330 (343)
                      ++......+.... .........+.+.....+...+++... ....+..++.++.++.+.+.|++++++.+
T Consensus       220 ~~~~~~~~~~~~g-~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~  289 (404)
T PRK14012        220 RKPRVRLEAQMHG-GGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKDIEEVYL  289 (404)
T ss_pred             cCCCCCCCceecC-CCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence            5431110010000 000000111112222222213333221 12223667788888888888888877764

>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

Probab=99.88  E-value=2.4e-20  Score=168.00  Aligned_cols=263  Identities=17%  Similarity=0.142  Sum_probs=196.0

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC-C-----CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE-K-----FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~  107 (343)
                      +.+++||+.++   |.++..+|.+++++.++++.. .     -.-++...-+.+|++.+|+|+        ..+..++.+
T Consensus        38 ~~~~~nf~SNd---YLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~--------g~e~al~f~  106 (388)
T COG0156          38 GRKVLNFCSND---YLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL--------GAEAALLFS  106 (388)
T ss_pred             CceeEeeeccC---cccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh--------CCCcEEEEc
Confidence            57889999998   567889999999999998752 1     111233334578999999999        456677666


Q ss_pred             ChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeC
Q 019298          108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIIN  181 (343)
Q Consensus       108 g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~  181 (343)
                      ++-.+...++.+|++++|.|+...-.|.+....++..+.+++.+..       .|++.|++.+++      +.+.|++..
T Consensus       107 SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~Ivteg  179 (388)
T COG0156         107 SGFVANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-------NDLDHLEALLEEARENGARRKLIVTEG  179 (388)
T ss_pred             ccchhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecC-------CCHHHHHHHHHhhhccCCCceEEEEec
Confidence            6788888889999999999999999999999999999999988864       378889888754      245666667


Q ss_pred             CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccc--cCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV--FGSTVPILTLGSLSKRWIVPGWRLGWFVT  259 (343)
Q Consensus       182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~--~~~~~~~i~~~S~sK~~~~~G~r~G~i~~  259 (343)
                      .-...|.+   .++.+|++++++|+.++++||+|+..+++...-.....  +...+..|+++||||+||..|   ||+.+
T Consensus       180 VfSMdGdi---ApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g  253 (388)
T COG0156         180 VFSMDGDI---APLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAG  253 (388)
T ss_pred             cccCCCCc---CCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceeeC
Confidence            78999999   66888899999999999999999999888544333222  233345799999999999998   99988


Q ss_pred             eCCCCCCCchHHHHHHhhhh-c-ccc-CcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298          260 TDPCGMFRKPKVVERMKKYF-D-ILG-DPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN  330 (343)
Q Consensus       260 ~~~~~~~~~~~~~~~l~~~~-~-~~~-~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~  330 (343)
                      +        ..+++.++... . +++ +.||...++. ...++...+..+.+++++++...+.+.+... |+.+
T Consensus       254 ~--------~~~~d~L~~~ar~~ifStalpP~~aaa~-~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~-~~~~  317 (388)
T COG0156         254 S--------AALIDYLRNRARPFIFSTALPPAVAAAA-LAALRILEEGPERRERLQELAAFFRSLLKAL-GLVL  317 (388)
T ss_pred             c--------HHHHHHHHHhCCceeccCCCCHHHHHHH-HHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc-CCcc
Confidence            5        36888887763 2 233 4455544444 4555443444448888888888888655554 4443

>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial

Probab=99.88  E-value=3.8e-20  Score=169.28  Aligned_cols=223  Identities=12%  Similarity=0.124  Sum_probs=161.9

Q ss_pred             CCCCCCCC---HHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH----HHhc
Q 019298           72 GYAPTAGL---PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFR  144 (343)
Q Consensus        72 ~Y~~~~g~---~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~  144 (343)
                      .|+. .|.   ..|++.+|++.        ..+++++++|+++|+..++.+++++||+|++++|.|......    ....
T Consensus        43 ~Y~r-~gnPt~~~lE~~lA~l~--------g~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~  113 (377)
T TIGR01324        43 TYGR-RGTLTHFALQDAMCELE--------GGAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRM  113 (377)
T ss_pred             cccC-CCCccHHHHHHHHHHHh--------CCCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhc
Confidence            4663 344   68999999998        356899999999999999999999999999999999876543    3456


Q ss_pred             CceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCC
Q 019298          145 HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP  224 (343)
Q Consensus       145 g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~  224 (343)
                      |.++..++..       +.+.+++++++++++|++++|+||+|..   .++++|+++|+++|+++|+|++|+......  
T Consensus       114 gi~v~~~d~~-------~~e~l~~~i~~~tklV~lesp~Np~g~~---~dl~~I~~la~~~g~~livD~t~a~g~~~~--  181 (377)
T TIGR01324       114 GVDITYYDPL-------IGEDIATLIQPNTKVLFLEAPSSITFEI---QDIPAIAKAARNPGIVIMIDNTWAAGLLFK--  181 (377)
T ss_pred             CcEEEEECCC-------CHHHHHHhcCCCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCccccccC--
Confidence            7777666321       2378898898899999999999999888   889999999999999999999998643211  


Q ss_pred             CCcccccCCCCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhH
Q 019298          225 FVPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIM  302 (343)
Q Consensus       225 ~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~  302 (343)
                        +.    ..+..++++|++|.++.++ ...|+++++        ++.+++++..... ....++.....+ ...+   .
T Consensus       182 --pl----~~gaDivv~S~tK~l~G~~d~~gG~v~~~--------~~~~~~l~~~~~~~G~~l~p~~a~~~-~rgl---~  243 (377)
T TIGR01324       182 --PL----EHGVDISIQAGTKYLVGHSDIMIGTVVAN--------ARTWDQLREHSYLMGQMVDADDAYTT-LRGL---R  243 (377)
T ss_pred             --cc----ccCceEEEecCceeccCCCCceEEEEEeC--------HHHHHHHHHHHHHhCCCCCHHHHHHH-Hhhh---h
Confidence              11    1234599999999998764 667877663        3456656543322 334555544444 1221   2


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          303 QIMIHGNFLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       303 ~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      ..-.+.++..++...+.+.|+++|.+. ++.|
T Consensus       244 tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp  275 (377)
T TIGR01324       244 TLGVRLKQHQESSLAIAKWLSEQPEVARVLHP  275 (377)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCCCcCEEECC
Confidence            222267777788788888998887765 5444

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK00451 glycine dehydrogenase subunit 1; Validated

Probab=99.88  E-value=1.9e-20  Score=176.40  Aligned_cols=270  Identities=21%  Similarity=0.183  Sum_probs=177.9

Q ss_pred             ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHH---hhhCCCCCCCCcEEEecChH
Q 019298           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT--AGLPLTRRAIAEYL---SRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~~---~~~~~~~~~~~~i~~~~g~~  110 (343)
                      ..++|+.|.++    +..+..+.+++....   ....|.+.  .-...++++++++.   .+.+|  ++.+++++++|++
T Consensus        69 ~~~~lg~g~~~----~~~p~~~~~~~~~~~---~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g--~~~~~v~~~~g~t  139 (447)
T PRK00451         69 YPSFLGAGAYD----HYIPAVVDHIISRSE---FYTAYTPYQPEISQGTLQAIFEYQTMICELTG--MDVANASMYDGAT  139 (447)
T ss_pred             CcccCcccccC----CcCcHHHHHHHhchh---HHHhcCCCCCccchHHHHHHHHHHHHHHHHhC--CCcceEEecCcHH
Confidence            56788888854    455666666554331   12235441  11344666666433   54454  4566899999999


Q ss_pred             HHHHHHHHHhc-CCCCeEEEeCCCCcchHHHHHh----cCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCC
Q 019298          111 QAIDVAMALLS-RPGANILLPRPGFPIYELSAAF----RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP  185 (343)
Q Consensus       111 ~al~~~~~~l~-~~gd~vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~np  185 (343)
                      +++..++.++. .+||+|+++++.|+.+...+..    .|.+++.+++++  + .+|++++++.++++++++++++| ||
T Consensus       140 ~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~--~-~~d~~~l~~~i~~~t~~v~l~~p-n~  215 (447)
T PRK00451        140 ALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYED--G-VTDLEALEAAVDDDTAAVVVQYP-NF  215 (447)
T ss_pred             HHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCC--C-CCCHHHHHHhcCCCeEEEEEECC-CC
Confidence            99999888874 7899999999999988876654    689999998754  3 78999999999888999999999 89


Q ss_pred             cccccCHHHHHHHHHHHhhcCcEEEE--ccCCCccccCCCCCCcccccCCCCCEEEEc---cCccccCCCCCcEEEEEEe
Q 019298          186 CGNVYSYQHLQKLAETANKLKTLVIA--DEVYGHLVFGDKPFVPMGVFGSTVPILTLG---SLSKRWIVPGWRLGWFVTT  260 (343)
Q Consensus       186 tG~~~~~~~l~~l~~~~~~~~~~~i~--D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~---S~sK~~~~~G~r~G~i~~~  260 (343)
                      ||.+   +++++|+++|+++|+++++  |.+...+.      ....   ..+..++++   +|||.|.+.|+++||+.++
T Consensus       216 tG~v---~~l~~I~~~a~~~~~~~iv~~d~~~~g~~------~~~~---~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~  283 (447)
T PRK00451        216 FGVI---EDLEEIAEIAHAGGALFIVGVDPVSLGLL------KPPG---EYGADIVVGEGQPLGIPLSFGGPYLGFFATR  283 (447)
T ss_pred             CCee---CCHHHHHHHHHHCCCEEEEEcChHHhccC------CCcc---cCCCCEEEECCCcCCCCCCCCCCCchHHHhh
Confidence            9999   5688889999999999998  54322111      0111   122235555   7888888889999999875


Q ss_pred             CCCCCCCchHHHHHH----------------------------hhhhcc-ccCcchHHHHHHHhccch-hhHHHHH-HHH
Q 019298          261 DPCGMFRKPKVVERM----------------------------KKYFDI-LGDPATFIQVCIMYGCLS-TIMQIMI-HGN  309 (343)
Q Consensus       261 ~~~~~~~~~~~~~~l----------------------------~~~~~~-~~~~~~~~~~a~~~~~l~-~~~~~l~-~~~  309 (343)
                      .        ++++.+                            +..... ..+.+...+.......+. ...+.++ .++
T Consensus       284 ~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~  355 (447)
T PRK00451        284 K--------KLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAE  355 (447)
T ss_pred             H--------HHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHH
Confidence            3        455542                            111111 111111122111111222 1123333 889


Q ss_pred             HHHHHHHHHHHhhcCCCCceeeCCCCceEee
Q 019298          310 FLENFAGSCVPSYKLIPELINFKSTGSSLKY  340 (343)
Q Consensus       310 ~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~  340 (343)
                      ++.++++.+.+.|++++|+.+.  ++++|.+
T Consensus       356 ~~~~~~~~l~~~L~~~~g~~~~--~~~~~~~  384 (447)
T PRK00451        356 QNHQKAHYLAERLAEIGGVELF--DGPFFNE  384 (447)
T ss_pred             HHHHHHHHHHHHHhhcCCEEec--CCCeEEE
Confidence            9999999999999998888764  4555543

>TIGR03402 FeS_nifS cysteine desulfurase NifS

Probab=99.87  E-value=4.8e-20  Score=170.18  Aligned_cols=257  Identities=14%  Similarity=0.097  Sum_probs=172.2

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCC---------CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAPTA---------GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS  121 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~---------g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~  121 (343)
                      .++++.+++++.+.+...  ..++...         -..++|+.+++++      +.++++|++|+|+++++..+++++.
T Consensus         9 ~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~i~~t~~~t~a~~~al~~~~   80 (379)
T TIGR03402         9 TRVDPEVLEAMLPYFTEY--FGNPSSMHSFGGEVGKAVEEAREQVAKLL------GAEPDEIIFTSGGTESDNTAIKSAL   80 (379)
T ss_pred             CCCCHHHHHHHHHHHHhc--CCCCCcccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCcHHHHHHHHHHHHH
Confidence            356788999998887532  1222211         1235667777776      4568899999999999999988764


Q ss_pred             ---CCCCeEEEeCCCCcchHHH---HHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHH
Q 019298          122 ---RPGANILLPRPGFPIYELS---AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHL  195 (343)
Q Consensus       122 ---~~gd~vl~~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l  195 (343)
                         .+|++|++...+|+.+...   +...|.+++.++.+.  ++.+|++++++.++++++++++++++||||..++.   
T Consensus        81 ~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~---  155 (379)
T TIGR03402        81 AAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDE--EGRLDLEELRAAITDDTALVSVMWANNETGTIFPI---  155 (379)
T ss_pred             HhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCC--CCcCCHHHHHHhcCCCcEEEEEEcccCCeeecccH---
Confidence               4568999999888766443   334689998887753  45689999999998889999999999999999775   


Q ss_pred             HHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH-
Q 019298          196 QKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER-  274 (343)
Q Consensus       196 ~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~-  274 (343)
                      ++|.++|+++|+++++|++++.    +..+..+...   +-.+++.|.+|.++..|  +|++.++.....  .|.+... 
T Consensus       156 ~~I~~l~~~~g~~vivD~~~~~----g~~~~~~~~~---~~D~~~~s~~K~~gp~G--~g~l~v~~~~~~--~p~~~g~~  224 (379)
T TIGR03402       156 EEIGEIAKERGALFHTDAVQAV----GKIPIDLKEM---NIDMLSLSGHKLHGPKG--VGALYIRKGTRF--RPLLRGGH  224 (379)
T ss_pred             HHHHHHHHHcCCEEEEECcccc----cccccCcccC---CCCEEEEcHHHcCCCCc--eEEEEECCCCCC--CCcccCCc
Confidence            5788889999999999999975    2222222222   22378889999776667  777776543211  1111100 


Q ss_pred             HhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcC-CCCceeeCC
Q 019298          275 MKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKL-IPELINFKS  333 (343)
Q Consensus       275 l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~-~~g~~~~~~  333 (343)
                      ...... .+.++.....++ .++++...++++ ..+++++.++.+.+.|.+ ++++.+..+
T Consensus       225 ~~~~~~-~gt~~~~~~~~l-~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~  283 (379)
T TIGR03402       225 QERGRR-AGTENVPGIVGL-GKAAELATEHLEEENTRVRALRDRLEAGLLARIPDARLNGD  283 (379)
T ss_pred             cCCCcC-CCCccHHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCC
Confidence            000111 233344333333 444443334444 667888889999999885 788876543

Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.

>PLN03227 serine palmitoyltransferase-like protein; Provisional

Probab=99.87  E-value=1.5e-20  Score=173.49  Aligned_cols=255  Identities=14%  Similarity=0.103  Sum_probs=170.7

Q ss_pred             EeccCCCCCCCCCCCcHHHHHHHHHHHhc-------CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           39 SLAMGDPTVHSCFHTTHVATEAVAEALLS-------EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        39 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      ||+..+   |.++..+|+++++..+++++       ... .|+...++.+|++++|++++.       .+.+++++|.++
T Consensus         2 ~f~s~d---yLgl~~~~~~~~~~~~a~~~~g~~~~~sr~-~yg~~~~~~~LE~~lA~~~g~-------e~al~~~sG~~a   70 (392)
T PLN03227          2 NFATHD---FLSTSSSPTLRQTALESLSHYGCGSCGPRG-FYGTIDAHLELEQCMAEFLGT-------ESAILYSDGAST   70 (392)
T ss_pred             CCcCcC---ccCCCCCHHHHHHHHHHHHHhCCCCccccc-ccCChHHHHHHHHHHHHHhCC-------CcEEEecCcHHH
Confidence            555555   45677899999999999875       222 377666789999999999942       356666666555


Q ss_pred             HHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc-----------CCceEEEEe
Q 019298          112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-----------QNTVALVII  180 (343)
Q Consensus       112 al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-----------~~~~~i~~~  180 (343)
                      .. .++.+++++||.|+++++.|.++...+...+.+++.++....    -+++.+.+.++           .++++|++.
T Consensus        71 ~~-~~i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~----~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E  145 (392)
T PLN03227         71 TS-STVAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWFRHNDM----KDLRRVLEQVRAQDVALKRKPTDQRRFLVVE  145 (392)
T ss_pred             HH-HHHHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCCH----HHHHHHHHHhhhhccccccccCCCcEEEEEc
Confidence            55 677778999999999999999988877777777776654210    12344333332           246778888


Q ss_pred             CCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccc--cC-CCCCEEEEccCccccCCCCCcEEEE
Q 019298          181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV--FG-STVPILTLGSLSKRWIVPGWRLGWF  257 (343)
Q Consensus       181 ~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~--~~-~~~~~i~~~S~sK~~~~~G~r~G~i  257 (343)
                      .+.||+|.+.+   ++++.++|++||+++|+||+|+....+.........  .. ..+..|++.|+||.++..   .|++
T Consensus       146 ~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~---gg~v  219 (392)
T PLN03227        146 GLYKNTGTLAP---LKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSV---GGMT  219 (392)
T ss_pred             CCcCCCCcccC---HHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhcc---CcEE
Confidence            88999999977   678889999999999999999833333211111111  11 123469999999997644   4888


Q ss_pred             EEeCCCCCCCchHHHHHHhhhh-c-c-ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC
Q 019298          258 VTTDPCGMFRKPKVVERMKKYF-D-I-LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       258 ~~~~~~~~~~~~~~~~~l~~~~-~-~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~  324 (343)
                      +++        +++++.++... . . ..+.+++.+.++ ..++....+..+.+++++++.+++.+.|++
T Consensus       220 ~~~--------~~~~~~~~~~~~~~~~~~~~~p~~~~aa-~~al~~~~~~~~~~~~l~~~~~~l~~~L~~  280 (392)
T PLN03227        220 VGS--------EEVVDHQRLSGSGYCFSASAPPFLAKAD-ATATAGELAGPQLLNRLHDSIANLYSTLTN  280 (392)
T ss_pred             ecC--------HHHHHHHHHhCcCccccCCCCHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHHHHh
Confidence            764        35666665432 1 1 223346555555 333322122223778888899999988875

>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.87  E-value=2.4e-20  Score=173.22  Aligned_cols=226  Identities=15%  Similarity=0.098  Sum_probs=161.4

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchH----HHHHhcCceeEEeec
Q 019298           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRHIEVRHFDL  153 (343)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~  153 (343)
                      ....|++.++++.        ..+..++++|+++++..++..++++||+|+++.+.|+...    ..+...|.+++.++.
T Consensus        65 ~~~~Le~~lA~le--------g~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~  136 (431)
T PRK08248         65 TTDVFEKRIAALE--------GGIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP  136 (431)
T ss_pred             hHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC
Confidence            4578889999988        3468889999999999999999999999999999996533    345668888888864


Q ss_pred             CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (343)
Q Consensus       154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~  233 (343)
                             .|++++++++++++++|++++|+||||.+++   +++|+++|+++|+++|+|++|...    ....++    .
T Consensus       137 -------~d~e~l~~ai~~~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~~----~~~~pl----~  198 (431)
T PRK08248        137 -------SDPENFEAAITDKTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFASP----YLLRPI----E  198 (431)
T ss_pred             -------CCHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCcc----ccCChh----H
Confidence                   3789999999888999999999999999976   568888899999999999998631    111111    2


Q ss_pred             CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCc-------------------------hH-HHHHHhhhh-ccccCcc
Q 019298          234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK-------------------------PK-VVERMKKYF-DILGDPA  286 (343)
Q Consensus       234 ~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~-------------------------~~-~~~~l~~~~-~~~~~~~  286 (343)
                      .+..+++.|++|.++++|.++|++++.+....+..                         +. +.+...... ......+
T Consensus       199 ~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~  278 (431)
T PRK08248        199 HGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALS  278 (431)
T ss_pred             cCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCCC
Confidence            24459999999999999999999888544321100                         00 011111111 1223445


Q ss_pred             hHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          287 TFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       287 ~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      +...+.+ ..-|   ..+-.+.++..++...+.+.|+.+|++. ++.|
T Consensus       279 p~~a~l~-~rgl---~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yP  322 (431)
T PRK08248        279 PFNSFLL-LQGL---ETLHLRMERHSENALAVAKFLEEHEAVEWVSYP  322 (431)
T ss_pred             HHHHHHH-hcCc---CcHHHHHHHHHHHHHHHHHHHHhCCCcceEECC
Confidence            5544444 2222   2222277788888889999999988876 5554

>PRK05939 hypothetical protein; Provisional

Probab=99.87  E-value=3.8e-20  Score=170.44  Aligned_cols=231  Identities=16%  Similarity=0.072  Sum_probs=162.0

Q ss_pred             CCCCCCCCH---HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH---HHHhcC
Q 019298           72 GYAPTAGLP---LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL---SAAFRH  145 (343)
Q Consensus        72 ~Y~~~~g~~---~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~---~~~~~g  145 (343)
                      .|.. .|.+   .|++.++++.+        .+..+++++++.++..++.+++++||+|+++++.|+....   .+...|
T Consensus        40 ~Y~r-~g~p~~~~lE~~la~leg--------~~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G  110 (397)
T PRK05939         40 TYAR-QGTPTTAALEAKITKMEG--------GVGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLG  110 (397)
T ss_pred             CcCC-CCCHHHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcC
Confidence            3544 3555   89999999873        3445566666999999999999999999999999976433   455678


Q ss_pred             ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (343)
Q Consensus       146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~  225 (343)
                      .+++.++.       .|++++++++++++++|++++|+||||.+   .++++|+++|+++|+++|+|++|+...    . 
T Consensus       111 ~~v~~v~~-------~d~e~l~~~l~~~tklV~vesp~NptG~v---~dl~~I~~la~~~gi~livD~t~a~~~----~-  175 (397)
T PRK05939        111 VEVTMVDA-------TDVQNVAAAIRPNTRMVFVETIANPGTQV---ADLAGIGALCRERGLLYVVDNTMTSPW----L-  175 (397)
T ss_pred             CEEEEECC-------CCHHHHHHhCCCCCeEEEEECCCCCCCCH---HhHHHHHHHHHHcCCEEEEECCccccc----c-
Confidence            88888764       37899999999899999999999999999   789999999999999999999986421    0 


Q ss_pred             CcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCC-----Cc---------hHHHHHHhhh--hccccCcchHH
Q 019298          226 VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF-----RK---------PKVVERMKKY--FDILGDPATFI  289 (343)
Q Consensus       226 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~-----~~---------~~~~~~l~~~--~~~~~~~~~~~  289 (343)
                        +. ....+..+++.|+||.++.+|.++|++++++....+     ..         +..+.+++..  .......++..
T Consensus       176 --~~-~~~~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~  252 (397)
T PRK05939        176 --FR-PKDVGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEA  252 (397)
T ss_pred             --cC-ccccCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHH
Confidence              11 111235699999999999999999998875322100     00         0011222221  12233445554


Q ss_pred             HHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          290 QVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       290 ~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      ...+ ..-|   ..+..+.++..++...+.+.|+..|.+. +..|
T Consensus       253 a~l~-~rgl---~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP  293 (397)
T PRK05939        253 AHRI-AIGA---ETLALRVDRSCSNALALAQFLEAHPKVARVYYP  293 (397)
T ss_pred             HHHH-HcCc---CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence            4444 1111   2233366777778999999999888765 5444

>PLN02409 serine--glyoxylate aminotransaminase

Probab=99.87  E-value=4.5e-20  Score=171.13  Aligned_cols=255  Identities=15%  Similarity=0.067  Sum_probs=176.8

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEe
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP  130 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~  130 (343)
                      ...++.+++++....    . .|. ..+..++++.+.+.+.+.+|.. ..+.+++++|+++++..++..++++||+|++.
T Consensus        18 ~~~~~~V~~a~~~~~----~-~~~-~~~~~~~~~~~~~~l~~~~g~~-~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~   90 (401)
T PLN02409         18 VNIPERVLRAMNRPN----E-DHR-SPAFPALTKELLEDVKYIFKTK-SGTPFIFPTTGTGAWESALTNTLSPGDKVVSF   90 (401)
T ss_pred             CCCCHHHHHHhcCCC----C-CCC-CHHHHHHHHHHHHHHHHHhCCC-CCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEe
Confidence            446778877765532    1 222 2355778888888877766653 23467888899999999999999999999999


Q ss_pred             CCCCcch--HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC----CceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298          131 RPGFPIY--ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----NTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (343)
Q Consensus       131 ~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~  204 (343)
                      ++.|...  ...++..|.+++.++.+.+  ..+|++++++.+++    +++++++++++||||.+++.+++.++++ |++
T Consensus        91 ~~~~~~~~~~~~~~~~g~~v~~v~~~~~--~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~~  167 (401)
T PLN02409         91 RIGQFSLLWIDQMQRLNFDVDVVESPWG--QGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CAQ  167 (401)
T ss_pred             CCCchhHHHHHHHHHcCCceEEEECCCC--CCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHh-hhc
Confidence            9988655  4567778999999987542  34799999999875    6899999999999999998777777766 999


Q ss_pred             cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc----
Q 019298          205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD----  280 (343)
Q Consensus       205 ~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~----  280 (343)
                      +|+++|+|++++..    ..+..+   ...+..+++.|.+|.++++. ++||++++.        +.+++++....    
T Consensus       168 ~g~~~vvD~v~s~g----~~~id~---~~~~~D~~~~s~~K~l~~P~-G~G~l~~~~--------~~~~~~~~~~~~~~~  231 (401)
T PLN02409        168 HPALLLVDGVSSIG----ALDFRM---DEWGVDVALTGSQKALSLPT-GLGIVCASP--------KALEASKTAKSPRVF  231 (401)
T ss_pred             cCcEEEEEcccccC----Cccccc---cccCccEEEEcCccccCcCC-CcceeEECH--------HHHHHHhcCCCCCee
Confidence            99999999998741    111112   22223377778899986643 699999853        45565543210    


Q ss_pred             --------------c-ccCcchHHHHHHHhccchhhHH-HHH-HHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298          281 --------------I-LGDPATFIQVCIMYGCLSTIMQ-IMI-HGNFLENFAGSCVPSYKLIPELINFKS  333 (343)
Q Consensus       281 --------------~-~~~~~~~~~~a~~~~~l~~~~~-~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~  333 (343)
                                    . .+.++.....++ ..+++...+ -++ .+++++++++.+.+.|+.+ |+++..+
T Consensus       232 ~~~~~~~~~~~~g~~~~~Tp~~~~~~al-~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~~~  299 (401)
T PLN02409        232 FDWADYLKFYKLGTYWPYTPSIQLLYGL-RAALDLIFEEGLENVIARHARLGEATRLAVEAW-GLKLCTK  299 (401)
T ss_pred             cCHHHHHHHHhcCCCCCCCccHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccC
Confidence                          0 112333334444 444432111 122 7788889999999999887 7775443

>PRK05968 hypothetical protein; Provisional

Probab=99.87  E-value=1.1e-19  Score=167.40  Aligned_cols=217  Identities=16%  Similarity=0.089  Sum_probs=158.3

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchH----HHHHhcCceeEEeec
Q 019298           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRHIEVRHFDL  153 (343)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~  153 (343)
                      ...+|++.++++++        .+..+++++++.++..++.+++++||+|+++.++|....    ..+...|.++..++.
T Consensus        64 ~~~~le~~lA~l~g--------~~~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~  135 (389)
T PRK05968         64 TVRAFEEMLAKLEG--------AEDARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG  135 (389)
T ss_pred             hHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC
Confidence            35789999999983        234455666778999999889999999999999998633    455667888888753


Q ss_pred             CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (343)
Q Consensus       154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~  233 (343)
                             .|++++++++ +++++|++++|+||++..   .++++|+++|+++|+++|+|++|+...+..    ++. .  
T Consensus       136 -------~d~~~l~~~i-~~tklV~ie~pt~~~~~~---~dl~~i~~la~~~gi~vivD~a~a~~~~~~----p~~-~--  197 (389)
T PRK05968        136 -------RDEEAVAKAL-PGAKLLYLESPTSWVFEL---QDVAALAALAKRHGVVTMIDNSWASPVFQR----PIT-L--  197 (389)
T ss_pred             -------CCHHHHHHhc-ccCCEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCcchhccC----chh-c--
Confidence                   2788998887 568899999877777665   899999999999999999999998754322    111 1  


Q ss_pred             CCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhhhc--cccCcchHHHHHHHhccchhhHHHHHHHHH
Q 019298          234 TVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFD--ILGDPATFIQVCIMYGCLSTIMQIMIHGNF  310 (343)
Q Consensus       234 ~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~  310 (343)
                       +..+++.|+||.++.+| .+.|+++++        ++++++++....  .....+++....+ ...|+   .+..+.++
T Consensus       198 -g~Divv~S~tK~l~g~~~~~gG~i~~~--------~~~~~~l~~~~~~~~g~~~~~~~A~~~-l~~L~---tl~~r~~~  264 (389)
T PRK05968        198 -GVDLVIHSASKYLGGHSDTVAGVVAGS--------KEHIARINAEAYPYLGAKLSPFEAWLL-LRGLR---TLPLRMKA  264 (389)
T ss_pred             -CCcEEEeeccccccCCCCeEEEEEEEC--------HHHHHHHHHHHHHhCCCCCChHHHHHH-HcccC---cHHHHHHH
Confidence             22388999999998866 578888763        357777765432  2335566655555 44443   33446666


Q ss_pred             HHHHHHHHHHhhcCCCCce-eeCC
Q 019298          311 LENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       311 ~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      ..++...+.+.|+.+|++. +..|
T Consensus       265 ~~~~a~~la~~L~~~p~v~~v~~p  288 (389)
T PRK05968        265 HEASALEIARRLKAHPVVERVCHP  288 (389)
T ss_pred             HHHHHHHHHHHHHhCCCccEEECC
Confidence            6777888889999998886 5444

>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.87  E-value=1.5e-20  Score=173.38  Aligned_cols=227  Identities=16%  Similarity=0.058  Sum_probs=158.5

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH----HHhcCceeEEeec
Q 019298           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFDL  153 (343)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~~  153 (343)
                      ....|++.++++.+        .+..+.+++++.||..++.+++++||+|+++.++|.+....    +...|.++..++.
T Consensus        62 tv~~lE~~la~leg--------~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~  133 (432)
T PRK06702         62 TLAAFEQKLAELEG--------GVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP  133 (432)
T ss_pred             HHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence            46789999999983        35688899999999999999999999999999999866665    6778999888843


Q ss_pred             CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (343)
Q Consensus       154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~  233 (343)
                            .+|++++++++++++++|++.+|+||++.+.+   +++|+++|+++|+++|+|++|+.-        .+...-.
T Consensus       134 ------~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP--------~~~~pl~  196 (432)
T PRK06702        134 ------NLTADEIVALANDKTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATP--------YLCQAFE  196 (432)
T ss_pred             ------CCCHHHHHHhCCcCCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCch--------hhCChhh
Confidence                  36889999999999999999999999999955   888899999999999999998531        1111111


Q ss_pred             CCCEEEEccCccccCCCCCcEEEEEE----------eCCCCCCCc--------------hHHHHHH--hhhhccccCcch
Q 019298          234 TVPILTLGSLSKRWIVPGWRLGWFVT----------TDPCGMFRK--------------PKVVERM--KKYFDILGDPAT  287 (343)
Q Consensus       234 ~~~~i~~~S~sK~~~~~G~r~G~i~~----------~~~~~~~~~--------------~~~~~~l--~~~~~~~~~~~~  287 (343)
                      .+-.|+++|+||..+..+.-+|-+++          ++......+              +++..+.  ........+.++
T Consensus       197 ~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp  276 (432)
T PRK06702        197 HGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSP  276 (432)
T ss_pred             cCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCCCH
Confidence            12349999999955554444443333          211111000              1111111  122333446777


Q ss_pred             HHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          288 FIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       288 ~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      +....+ ...|+.   +-.+.++..++...+.++|+.+|.+. +..|
T Consensus       277 ~~a~l~-~rgL~T---l~lR~~r~~~Na~~la~~L~~~p~V~~V~yP  319 (432)
T PRK06702        277 FNAYIS-NIGLET---LHLRMERHSENALAVAKWLADHERIEWVNYP  319 (432)
T ss_pred             HHHHHH-HhccCc---HHHHHHHHHHHHHHHHHHHHhCCCcceEECC
Confidence            766666 444432   22255666789999999999888766 4444

>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional

Probab=99.86  E-value=1.1e-19  Score=167.25  Aligned_cols=191  Identities=16%  Similarity=0.157  Sum_probs=146.5

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeCCC
Q 019298           55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRPG  133 (343)
Q Consensus        55 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~p~  133 (343)
                      +.-.+++.+.+..+.. .++  ....+|+++++++++        .++++.++|+++++..++.++ +++||+|+++.++
T Consensus        14 ~~e~~~~~~~l~~~~~-~~g--~~~~~le~~la~~~g--------~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~   82 (379)
T PRK11658         14 DEELAAVKEVLRSGWI-TTG--PKNQALEQAFCQLTG--------NQHAIAVSSATAGMHITLMALGIGPGDEVITPSLT   82 (379)
T ss_pred             HHHHHHHHHHHHcCCc-cCC--HhHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCc
Confidence            5557777777765433 233  357899999999993        357888999999999999999 7999999999999


Q ss_pred             CcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEcc
Q 019298          134 FPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE  213 (343)
Q Consensus       134 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~  213 (343)
                      |..+...+...|++++.+++++ +++.+|++++++++++++++|+   |+|++|...   ++++|.++|+++|+++|+|+
T Consensus        83 ~~~~~~~~~~~G~~~v~vd~~~-~~~~~d~~~l~~~i~~~tkav~---~~~~~G~~~---d~~~i~~~a~~~gi~vi~D~  155 (379)
T PRK11658         83 WVSTLNMIVLLGATPVMVDVDR-DTLMVTPEAIEAAITPRTKAII---PVHYAGAPA---DLDAIRAIGERYGIPVIEDA  155 (379)
T ss_pred             HHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhcccCCeEEE---EeCCCCCcC---CHHHHHHHHHHcCCeEEEEC
Confidence            9999888899999999998865 4567999999999988888876   666799984   56788889999999999999


Q ss_pred             CCCcc-ccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh
Q 019298          214 VYGHL-VFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY  278 (343)
Q Consensus       214 ay~~~-~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~  278 (343)
                      +|+.. .+.+..   +   ...+  +.+.||++...+++.+.|++++.+       +++.++++..
T Consensus       156 a~a~g~~~~~~~---~---g~~g--~~~~Sf~~~K~l~~g~GG~v~~~~-------~~~~~~~~~~  206 (379)
T PRK11658        156 AHAVGTYYKGRH---I---GARG--TAIFSFHAIKNITCAEGGLVVTDD-------DELADRLRSL  206 (379)
T ss_pred             CCccCCeECCee---c---CCCC--CEEEeCCCCCcCcccCceEEEECC-------HHHHHHHHHH
Confidence            99853 333321   1   1212  245677766566777788888754       4577766654

>PRK07671 cystathionine beta-lyase; Provisional

Probab=99.86  E-value=5.2e-20  Score=168.75  Aligned_cols=225  Identities=17%  Similarity=0.131  Sum_probs=158.0

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH----HHHhcC
Q 019298           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRH  145 (343)
Q Consensus        70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g  145 (343)
                      +.+|+. +....|++.++++.+        .+..+++++++.++..++ .++++||+|+++.|+|+....    .+...|
T Consensus        44 y~r~~~-p~~~~Le~~lA~l~g--------~~~~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G  113 (377)
T PRK07671         44 YSRTGN-PTRAALEELIAVLEG--------GHAGFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFG  113 (377)
T ss_pred             cCCCCC-hHHHHHHHHHHHHhC--------CCceEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCC
Confidence            334443 346789999999983        233445555577887765 577899999999999984433    334468


Q ss_pred             ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (343)
Q Consensus       146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~  225 (343)
                      .+++.++.       .|++++++++++++++|++++|+||||.+   .++++|+++|+++|+++|+|++|....+. .  
T Consensus       114 ~~v~~v~~-------~d~~~l~~ai~~~tklV~le~P~NPtg~~---~dl~~I~~la~~~g~~lvvD~a~~~~~~~-~--  180 (377)
T PRK07671        114 IEHTFVDT-------SNLEEVEEAIRPNTKAIYVETPTNPLLKI---TDIKKISTIAKEKGLLTIVDNTFMTPYWQ-S--  180 (377)
T ss_pred             eEEEEECC-------CCHHHHHHhcCCCCeEEEEECCCCCCCcc---cCHHHHHHHHHHcCCEEEEECCCCccccC-C--
Confidence            88887753       37899999998899999999999999998   56788888899999999999999754332 1  


Q ss_pred             CcccccCCCCCEEEEccCccccCCCCC-cEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHH
Q 019298          226 VPMGVFGSTVPILTLGSLSKRWIVPGW-RLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQ  303 (343)
Q Consensus       226 ~~~~~~~~~~~~i~~~S~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~  303 (343)
                       ++ .+   +..+++.|+||.++.++- -.|++++.+       ++++++++..+.. ....++.....+ ..-++   .
T Consensus       181 -p~-~~---g~Divv~S~sK~l~G~~~~~~G~~v~~~-------~~l~~~~~~~~~~~g~~~~~~~a~l~-~~~l~---t  244 (377)
T PRK07671        181 -PI-SL---GADIVLHSATKYLGGHSDVVAGLVVVNS-------PELAEDLHFVQNSTGGILGPQDSWLL-LRGLK---T  244 (377)
T ss_pred             -hh-hh---CCeEEEecCcccccCCccceeEEEEeCc-------HHHHHHHHHHHHhhcCCCCHHHHHHH-HcCcC---h
Confidence             11 11   234999999999987653 456666643       3577777766543 234555544444 22222   2


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          304 IMIHGNFLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       304 ~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      +-.+.++..++...+.+.|++.|++. ++.|
T Consensus       245 l~~R~~~~~~na~~la~~L~~~~~v~~v~~p  275 (377)
T PRK07671        245 LGIRMEEHETNSRAIAEFLNNHPAVNKVYYP  275 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCeeEEECC
Confidence            22277788899999999999888776 5454

>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

Probab=99.86  E-value=2.4e-19  Score=164.48  Aligned_cols=268  Identities=17%  Similarity=0.209  Sum_probs=192.1

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CC--CCCCCC----CCCHHHHHHHHHHHhhhCCCCCC-CCcEE
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KF--NGYAPT----AGLPLTRRAIAEYLSRDLPYKLT-PNDVF  104 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~Y~~~----~g~~~lr~~ia~~~~~~~~~~~~-~~~i~  104 (343)
                      +.+++.|..+..     ...|..+.+++.+.+...  ..  ..|...    .-.++.|+.+++|+      +.+ .++|+
T Consensus        20 ~~~~vylD~aa~-----~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~------~a~~~~eIv   88 (405)
T COG0520          20 GKPLVYLDNAAT-----SQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFL------NADSSDEIV   88 (405)
T ss_pred             CCCeEEecCccc-----ccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHh------CCCCCCeEE
Confidence            456788888762     236888999998877431  11  122221    13467889999998      456 48999


Q ss_pred             EecChHHHHHHHHHHh---cCCCCeEEEeCCCCcc----hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEE
Q 019298          105 VTSGCTQAIDVAMALL---SRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL  177 (343)
Q Consensus       105 ~~~g~~~al~~~~~~l---~~~gd~vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i  177 (343)
                      +|+|+|++|+.+..++   .++||+|++..-.|++    +...++..|++++.++++  +++.++.+.++..++++++++
T Consensus        89 ft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~--~~g~~~~~~~~~~i~~~Tklv  166 (405)
T COG0520          89 FTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD--DDGLLDLDALEKLITPKTKLV  166 (405)
T ss_pred             EeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecC--CCCCcCHHHHHHhcCCCceEE
Confidence            9999999999999999   5899999999999865    444556669999999987  455799999999999999999


Q ss_pred             EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCC-CCcEEE
Q 019298          178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP-GWRLGW  256 (343)
Q Consensus       178 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~-G~r~G~  256 (343)
                      .++..+|.||++   .++++|+++|+++|+++++|.+++.    +..+..+..+   +-.+++.|.+|.+..| |  +|.
T Consensus       167 ais~vSn~tG~~---~pv~~I~~la~~~ga~v~VDaaq~~----~h~~idv~~l---~~Df~afsgHKwl~gP~G--iGv  234 (405)
T COG0520         167 ALSHVSNVTGTV---NPVKEIAELAHEHGALVLVDAAQAA----GHLPIDVQEL---GCDFLAFSGHKWLLGPTG--IGV  234 (405)
T ss_pred             EEECcccccccc---chHHHHHHHHHHcCCEEEEECcccc----CccCCCchhc---CCCEEEEcccccccCCCc--eEE
Confidence            999999999999   6689999999999999999999986    2233333333   3449999999954444 6  788


Q ss_pred             EEEeCCCCCCCchHHHHHHhhh----------------------hccccCcchHHHHHHHhccchhhHHHH--HHHHHHH
Q 019298          257 FVTTDPCGMFRKPKVVERMKKY----------------------FDILGDPATFIQVCIMYGCLSTIMQIM--IHGNFLE  312 (343)
Q Consensus       257 i~~~~~~~~~~~~~~~~~l~~~----------------------~~~~~~~~~~~~~a~~~~~l~~~~~~l--~~~~~~~  312 (343)
                      +.++.        ++.+.+.-.                      ...-.+.+.+.+.....++++-..++.  +..++.+
T Consensus       235 Ly~r~--------~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~  306 (405)
T COG0520         235 LYVRK--------ELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHER  306 (405)
T ss_pred             EEEch--------HHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHH
Confidence            88854        455555111                      111112222333322234433222222  1777888


Q ss_pred             HHHHHHHHhhcCCCCceeeCCC
Q 019298          313 NFAGSCVPSYKLIPELINFKST  334 (343)
Q Consensus       313 ~~~~~~~~~L~~~~g~~~~~~~  334 (343)
                      +..+++.+.|.++|++.++.|.
T Consensus       307 ~L~~~~~~~L~~~~~v~i~g~~  328 (405)
T COG0520         307 ELTEYLLEGLSELPGVEIYGPP  328 (405)
T ss_pred             HHHHHHHHHHhcCCCeEEecCC
Confidence            8899999999999999966653

>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase

Probab=99.86  E-value=1.4e-19  Score=165.77  Aligned_cols=194  Identities=25%  Similarity=0.347  Sum_probs=144.4

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeCC
Q 019298           54 THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRP  132 (343)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~p  132 (343)
                      .++..+++.+++..+...+      ...+++++.+++.+..    +.+++++|+|+++++..++.++ +++||+|+++.+
T Consensus        10 ~~~e~~a~~~~~~~~~~~~------~g~~~~~~e~~la~~~----g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~   79 (376)
T TIGR02379        10 TGQELEYIAEAISEGKLSG------DGPFSRRCETWLENRT----GTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSY   79 (376)
T ss_pred             CHHHHHHHHHHHHcCCccC------CcHHHHHHHHHHHHHh----CCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCC
Confidence            4556788888877543321      1234555555554432    4578999999999999999887 789999999999


Q ss_pred             CCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEc
Q 019298          133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD  212 (343)
Q Consensus       133 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D  212 (343)
                      +|..+...+...|++++.+++++ +++.+|++++++++++++++|+   |+||+|...+   +++|.++|++||+++|+|
T Consensus        80 t~~~~~~~~~~~G~~~v~vd~d~-~~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~d---~~~I~~la~~~~i~vIeD  152 (376)
T TIGR02379        80 TFVSTANAFVLRGAKIVFVDIRP-DTMNIDETLIESAITHRTKAIV---PVHYAGVACD---MDTIMALANKHQLFVIED  152 (376)
T ss_pred             CcHHHHHHHHHcCCEEEEEecCC-CcCCCCHHHHHHhcCcCceEEE---EeCCCCCccC---HHHHHHHHHHCCCEEEEE
Confidence            99999888899999999999875 4578999999999988888876   6778999854   668888899999999999


Q ss_pred             cCCCccc-cCCCCCCcccccCCCCCEEEEccCc--cccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh
Q 019298          213 EVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF  279 (343)
Q Consensus       213 ~ay~~~~-~~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~  279 (343)
                      ++|+.+. +.+.....   +..    +.+.||+  |.+ .+|.+.|++++++       +++.++++..+
T Consensus       153 aa~~~g~~~~~~~~g~---~~~----~~~fSf~~~K~l-~~g~~gG~v~~~~-------~~~~~~~~~~~  207 (376)
T TIGR02379       153 AAQGVMSTYKGRALGS---IGH----LGTFSFHETKNY-TSGGEGGALLIND-------QAFIERAEIIR  207 (376)
T ss_pred             CccccCCccCCcccCC---CCC----EEEEeCCCCCcC-cccCCceEEEECC-------HHHHHHHHHHH
Confidence            9998764 44433222   111    4444543  664 4577889998864       46777777664

This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).

>PRK13520 L-tyrosine decarboxylase; Provisional

Probab=99.86  E-value=2.4e-19  Score=165.10  Aligned_cols=266  Identities=17%  Similarity=0.097  Sum_probs=176.0

Q ss_pred             CCCcHHHHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC----CC
Q 019298           51 FHTTHVATEAVAEALLSEK--FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR----PG  124 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~----~g  124 (343)
                      .++.|.+.+++.+++....  ...|   .+..++.+.+.+.+.+.+|  .+.+++++++|+++++..+++.+..    ++
T Consensus        30 ~~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~~~~la~~~g--~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~  104 (371)
T PRK13520         30 TEPHPIARKAHEMFLETNLGDPGLF---PGTAKLEEEAVEMLGELLH--LPDAYGYITSGGTEANIQAVRAARNLAKAEK  104 (371)
T ss_pred             cCchHHHHHHHHHHHhcCCCCcccC---ccHHHHHHHHHHHHHHHhC--CCCCCeEEecCcHHHHHHHHHHHHhhccCCC
Confidence            3467888898888876431  1112   2334433444444443333  4556788999999999998877643    57


Q ss_pred             CeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298          125 ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (343)
Q Consensus       125 d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~  204 (343)
                      ++|++.++.|..+...++..|.+++.++.+  .++.+|+++|+++++++++.++++.++|+||...+   +++|.++|++
T Consensus       105 ~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~---l~~I~~l~~~  179 (371)
T PRK13520        105 PNIVVPESAHFSFDKAADMLGVELRRAPLD--DDYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDP---IPELSKIALE  179 (371)
T ss_pred             ceEEecCcchHHHHHHHHHcCceEEEecCC--CCCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCC---HHHHHHHHHH
Confidence            899999999999988888899999988764  34568999999999888878888888999999955   7788888999


Q ss_pred             cCcEEEEccCCCccccCC-CCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc--
Q 019298          205 LKTLVIADEVYGHLVFGD-KPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI--  281 (343)
Q Consensus       205 ~~~~~i~D~ay~~~~~~~-~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~--  281 (343)
                      +|+++++|++|+.+...- .....+ .....+-..+..|.+|. +.+|.++|+++..+       +++++.+......  
T Consensus       180 ~g~~livD~a~~~~~~~~~~~~~~~-~~~~~~vd~~~~s~~K~-~~a~~~~G~~~~~~-------~~~~~~l~~~~~~~~  250 (371)
T PRK13520        180 NGIFLHVDAAFGGFVIPFLDDPPNF-DFSLPGVDSITIDPHKM-GLAPIPAGGILFRD-------ESYLDALAVDTPYLT  250 (371)
T ss_pred             cCCCEEEEecchhHHHHhhcCCCCc-cccCCCCceEEECCccc-cCccCCceEEEEcC-------HHHHHhhcccCcccc
Confidence            999999999998764321 110011 11111122455678885 77788999888754       3455555422111  


Q ss_pred             -------ccCcchHHHHHHHhccchhh--HHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCCCCce
Q 019298          282 -------LGDPATFIQVCIMYGCLSTI--MQIMIHGNFLENFAGSCVPSYKLIPELI-NFKSTGSS  337 (343)
Q Consensus       282 -------~~~~~~~~~~a~~~~~l~~~--~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~~~g~  337 (343)
                             .+..+.....++ .++|...  ..+.+.+++..++++++.+.|+++ |+. +..+..++
T Consensus       251 ~~~~~~~~gt~~~~~~~~~-~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~  314 (371)
T PRK13520        251 SKKQATLTGTRSGAGVAAT-YAVMKYLGREGYRKVVERCMENTRWLAEELKER-GFEPVIEPVLNI  314 (371)
T ss_pred             CCCCcceEeeccChHHHHH-HHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCceE
Confidence                   011122333333 3334321  223347888889999999999888 887 55555443

>cd00615 Orn_deC_like Ornithine decarboxylase family

Probab=99.86  E-value=2e-20  Score=166.41  Aligned_cols=167  Identities=17%  Similarity=0.175  Sum_probs=130.2

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCC
Q 019298           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD  156 (343)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~  156 (343)
                      .-..++++.+|++++      . .+.+++++|++.++..++.+++++||+|++++++|.+....+...|.+++.++...+
T Consensus        59 g~i~~~~~~~A~~~g------a-~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~  131 (294)
T cd00615          59 GPIKEAQELAARAFG------A-KHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERN  131 (294)
T ss_pred             hHHHHHHHHHHHHhC------C-CCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccC
Confidence            346788899999983      1 234456999999999999999999999999999999988888999999888876544


Q ss_pred             CC----CCCCHHHHHhhhcC--CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCc-cccCCCCCCccc
Q 019298          157 KG----WEVDLDDIESLADQ--NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPMG  229 (343)
Q Consensus       157 ~~----~~~d~~~l~~~~~~--~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~-~~~~~~~~~~~~  229 (343)
                      .+    ..+|++++++++++  +++++++++| |++|.+++   +++|+++|+++|+++|+|++|+. +.+.+..+..  
T Consensus       132 ~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~--  205 (294)
T cd00615         132 PYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSS--  205 (294)
T ss_pred             cccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCcccCcc--
Confidence            33    36899999999863  6788999998 79999965   78889999999999999999985 3333321111  


Q ss_pred             ccCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298          230 VFGSTVPILTLGSLSKRWIVPGWRLGWFVT  259 (343)
Q Consensus       230 ~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~  259 (343)
                       ....+..+++.|++|+  ++|++.|+++.
T Consensus       206 -~~~~~~div~~S~hK~--l~g~~~~~~l~  232 (294)
T cd00615         206 -AAMAGADIVVQSTHKT--LPALTQGSMIH  232 (294)
T ss_pred             -hhhcCCcEEEEchhcc--cchHhHHHHHH
Confidence             1223567999999998  47777766543

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.

>TIGR03235 DNA_S_dndA cysteine desulfurase DndA

Probab=99.86  E-value=8e-20  Score=167.10  Aligned_cols=254  Identities=16%  Similarity=0.115  Sum_probs=171.1

Q ss_pred             CCCcHHHHHHHHHHHhcCCC--CCCCCC------CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC
Q 019298           51 FHTTHVATEAVAEALLSEKF--NGYAPT------AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR  122 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~--~~Y~~~------~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~  122 (343)
                      .++++.+++++.+.+.....  ......      .-..++|+.+++++      +.++++|++++|+++++..++..+..
T Consensus         8 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~~~g~t~a~~~~l~~l~~   81 (353)
T TIGR03235         8 TPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEAL------GADTEEVIFTSGATESNNLAILGLAR   81 (353)
T ss_pred             CCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCHHHHHHHHHHHHHH
Confidence            35788999999888753211  110100      11356788888887      45788999999999999999888753


Q ss_pred             ----CC-CeEEEeCCCCcchHH---HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298          123 ----PG-ANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (343)
Q Consensus       123 ----~g-d~vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~  194 (343)
                          +| +.|++....|+.+..   .++..|.+++.++.+  .++.+|++++++.++++++++++++++||||.+++   
T Consensus        82 ~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~---  156 (353)
T TIGR03235        82 AGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVD--ESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQP---  156 (353)
T ss_pred             hcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccC---
Confidence                55 778888777765533   345568899888875  34568999999999888899999999999999965   


Q ss_pred             HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (343)
Q Consensus       195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~  274 (343)
                      +++|+++|+++|+++++|++++....    +..+.   ..+-.+++.|.+|.++.+|  +|+++++++....      ..
T Consensus       157 ~~~I~~l~~~~~~~~ivD~a~~~g~~----~~~~~---~~~~D~~~~s~~K~~gp~g--~g~l~~~~~~~~~------~~  221 (353)
T TIGR03235       157 IREIAEVLEAHEAFFHVDAAQVVGKI----TVDLS---ADRIDLISCSGHKIYGPKG--IGALVIRKRGKPK------AP  221 (353)
T ss_pred             HHHHHHHHHHcCCEEEEEchhhcCCc----ccccc---ccCCCEEEeehhhcCCCCc--eEEEEEccCcccc------cc
Confidence            68888889999999999999875321    11121   1123378889999876666  7998887532100      00


Q ss_pred             Hhhh-------hcc-ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeC
Q 019298          275 MKKY-------FDI-LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFK  332 (343)
Q Consensus       275 l~~~-------~~~-~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~  332 (343)
                      ++..       ... .+.++.....++ .+++....+..+ .+++++++++.+++.|+. +|+++..
T Consensus       222 ~~~~~~~~~~~~~~~~gt~~~~~~~al-~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~  286 (353)
T TIGR03235       222 LKPIMFGGGQERGLRPGTLPVHLIVGM-GEAAEIARRNAQAWEVKLRAMRNQLRDALQT-LGVKLNG  286 (353)
T ss_pred             cCceeeCCCCcCccccCCCChHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-CCeEEeC
Confidence            1100       001 223333333333 444432222222 788899999999999988 5888543

This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.

>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.86  E-value=1.7e-19  Score=167.45  Aligned_cols=224  Identities=19%  Similarity=0.147  Sum_probs=156.8

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh----cCceeEEeec
Q 019298           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----RHIEVRHFDL  153 (343)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~----~g~~~~~~~~  153 (343)
                      ....|++.++++.+        .+..++++++++++..++.+++++||+|+++.+.|......+..    .|.++..++.
T Consensus        59 t~~~Le~~lA~l~g--------~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~  130 (425)
T PRK06084         59 TNDVLEQRVAALEG--------GVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH  130 (425)
T ss_pred             hHHHHHHHHHHHhC--------CCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECC
Confidence            45789999999972        35667888889999999999999999999999999865444432    3555544432


Q ss_pred             CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (343)
Q Consensus       154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~  233 (343)
                             .|++++++++++++++|++++|+||||.+++   +++|+++|+++|+++|+|++|+.....    .++ .+  
T Consensus       131 -------~d~e~le~ai~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~~----~p~-~~--  193 (425)
T PRK06084        131 -------DDIAALEALIDERTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVLC----RPF-EH--  193 (425)
T ss_pred             -------CCHHHHHHHhccCCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC----Chh-hc--
Confidence                   3799999999888999999999999999976   688888899999999999999853321    111 11  


Q ss_pred             CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH----------------------------HHHHh-h-hhcccc
Q 019298          234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV----------------------------VERMK-K-YFDILG  283 (343)
Q Consensus       234 ~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~----------------------------~~~l~-~-~~~~~~  283 (343)
                       +..+++.|++|.++++|.++|.+++.+....+  .+.                            ....+ . ......
T Consensus       194 -gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~  270 (425)
T PRK06084        194 -GADIVVHSLTKYIGGHGTSIGGIVVDSGKFPW--AEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGA  270 (425)
T ss_pred             -CCCEEEECchhcccccccceeEEEEeCCccch--hhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCC
Confidence             23499999999999999999998885432110  000                            00000 0 112233


Q ss_pred             CcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          284 DPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       284 ~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      ..+++..+.+ ..-|   ..+-.+.++..++...+.+.|+.+|++. ++.|
T Consensus       271 ~l~~~~a~l~-lrgl---~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP  317 (425)
T PRK06084        271 ALSPFNAFLI-LQGL---ETLALRMERHTENALKVARYLQQHPQVAWVKYA  317 (425)
T ss_pred             CCCHHHHHHH-HcCc---CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence            4455544433 2222   2333377777888888999999988876 5554

>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional

Probab=99.86  E-value=2.6e-19  Score=164.71  Aligned_cols=192  Identities=21%  Similarity=0.334  Sum_probs=140.6

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeCCC
Q 019298           55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRPG  133 (343)
Q Consensus        55 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~p~  133 (343)
                      +.-.+++.+.+..+..  |+    ...+++++.+++.+.+    +.+++++++|+++++..++..+ +++||+|+++.|+
T Consensus        11 ~~~~~~~~~~l~~~~~--~g----~~~~~~~~e~~la~~~----g~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t   80 (375)
T PRK11706         11 GTELDYIQQAMSSGKL--CG----DGGFTRRCQQWLEQRF----GSAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYT   80 (375)
T ss_pred             HHHHHHHHHHHHcCCc--cC----CCHHHHHHHHHHHHHh----CCCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCC
Confidence            4446677777665432  22    2345566666555433    3479999999999999887766 6899999999999


Q ss_pred             CcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEcc
Q 019298          134 FPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE  213 (343)
Q Consensus       134 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~  213 (343)
                      |..+...+...|++++.+++++ +++.+|++++++++++++++|+++   |++|..   .++++|.++|+++|+++|+|+
T Consensus        81 ~~~~~~~~~~~G~~~v~~d~d~-~~~~~d~~~le~~i~~~tk~i~~~---~~~G~~---~~~~~i~~la~~~~i~vIeD~  153 (375)
T PRK11706         81 FVSTANAFVLRGAKIVFVDIRP-DTMNIDETLIEAAITPKTRAIVPV---HYAGVA---CEMDTIMALAKKHNLFVVEDA  153 (375)
T ss_pred             cHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhcCCCCeEEEEe---CCCCCc---cCHHHHHHHHHHcCCEEEEEC
Confidence            9999999999999999998875 457899999999998888888865   468987   456788888999999999999


Q ss_pred             CCCccc-cCCCCCCcccccCCCCCEEEEccCc--cccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh
Q 019298          214 VYGHLV-FGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF  279 (343)
Q Consensus       214 ay~~~~-~~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~  279 (343)
                      +|+.+. +++..   ...+.    .+.+.||+  |.++ +|.+.++++.+        +++.++++..+
T Consensus       154 a~a~g~~~~~~~---~g~~~----~~~~~Sf~~~K~l~-~g~gG~~~~~~--------~~~~~~~~~~~  206 (375)
T PRK11706        154 AQGVMSTYKGRA---LGTIG----HIGCFSFHETKNYT-AGEGGALLIND--------PALIERAEIIR  206 (375)
T ss_pred             ccccccccCCee---eecCc----CEEEEeCCCCcccc-ccCCeEEEECC--------HHHHHHHHHHH
Confidence            999765 33332   22222    14555655  9974 47776766542        46777666554

>PLN02651 cysteine desulfurase

Probab=99.86  E-value=3.1e-19  Score=163.76  Aligned_cols=262  Identities=14%  Similarity=0.079  Sum_probs=171.1

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCC------CC--CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh--
Q 019298           51 FHTTHVATEAVAEALLSEKFNGY------AP--TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL--  120 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y------~~--~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l--  120 (343)
                      .+.++.+.+++.+.+.....+..      ..  ..-..++|+.+++++      +.++++|++++|+++++..++..+  
T Consensus         9 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~t~~~t~a~~~~l~~~~~   82 (364)
T PLN02651          9 TPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALI------GADPKEIIFTSGATESNNLAIKGVMH   82 (364)
T ss_pred             CCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCHHHHHHHHHHHHHH
Confidence            35778899999887753211100      00  011345677777776      457789999999999988877664  


Q ss_pred             --cCCCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHH
Q 019298          121 --SRPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHL  195 (343)
Q Consensus       121 --~~~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l  195 (343)
                        .++||+|++....|+.+...+   ...|.+++.++.+  .++.+|+++++++++++++++++++++|+||...+   +
T Consensus        83 ~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~---l  157 (364)
T PLN02651         83 FYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVK--SDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQP---V  157 (364)
T ss_pred             hccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhcCCCcEEEEEECCCCCceeccc---H
Confidence              468999999998887654332   3468888888775  34568999999999888999999999999999954   6


Q ss_pred             HHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHH
Q 019298          196 QKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM  275 (343)
Q Consensus       196 ~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l  275 (343)
                      ++|.++|+++|+++++|.+++...    .+..+..+   +-.+++.|.+|.+|..|  +|++.++++.....++.+...-
T Consensus       158 ~~I~~~~~~~g~~~~vD~a~~~g~----~~~~~~~~---~~D~~~~s~hK~~gp~G--~g~l~v~~~~~~~l~p~~~g~~  228 (364)
T PLN02651        158 EEIGELCREKKVLFHTDAAQAVGK----IPVDVDDL---GVDLMSISGHKIYGPKG--VGALYVRRRPRVRLEPLMSGGG  228 (364)
T ss_pred             HHHHHHHHHcCCEEEEEcchhhCC----cccCcccC---CCCEEEechhhhCCCCc--eEEEEEcCCCCCCCCccccCCC
Confidence            788899999999999999998622    11222222   23488999999643344  8888886543211111111000


Q ss_pred             hhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcC-CCCceeeCC
Q 019298          276 KKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKL-IPELINFKS  333 (343)
Q Consensus       276 ~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~-~~g~~~~~~  333 (343)
                      .......+.++.....++ .++|+...+..+ .+++.++.++++.+.|.+ +||+++..|
T Consensus       229 ~~~~~~~GT~~~~~~~~l-~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~  287 (364)
T PLN02651        229 QERGRRSGTENTPLVVGL-GAACELAMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGP  287 (364)
T ss_pred             ccCCccCCCccHHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECC
Confidence            000011233444433333 444443222223 677888888889988875 678886554

>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic

Probab=99.85  E-value=1.4e-19  Score=166.05  Aligned_cols=220  Identities=16%  Similarity=0.156  Sum_probs=155.5

Q ss_pred             CCCCC--CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH----HHhcC
Q 019298           72 GYAPT--AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRH  145 (343)
Q Consensus        72 ~Y~~~--~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g  145 (343)
                      .|...  ....+|++.++++++        .++++++++++.++..++. ++++||+|+++.+.|..+...    +...|
T Consensus        40 ~Y~r~~~p~~~~le~~la~l~g--------~~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G  110 (378)
T TIGR01329        40 DYTRSGNPTRTALESLLAKLDK--------ADRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSG  110 (378)
T ss_pred             ccCCCCChHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcC
Confidence            46542  124567777777762        3567777777889998776 779999999999999876543    45578


Q ss_pred             ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (343)
Q Consensus       146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~  225 (343)
                      .+++.++.       .|+++++++++++++++++++|+||+|.+.   ++++|+++|+++|+++|+|++|.....    .
T Consensus       111 ~~v~~vd~-------~d~~~le~~i~~~tklv~le~psnptg~v~---dl~~I~~la~~~g~~vivD~a~~~~~~----~  176 (378)
T TIGR01329       111 VVVVHVDT-------TDLDKVKAALGPKTKLVLLESPTNPLQKIV---DIRKISEMAHAQNALVVVDNTMMSPLL----C  176 (378)
T ss_pred             cEEEEeCC-------CCHHHHHHhcCcCceEEEEECCCCCCCeee---cHHHHHHHHHHcCCEEEEECCCccccc----C
Confidence            99888865       278999999988899999999999999995   588889999999999999999864221    1


Q ss_pred             CcccccCCCCCEEEEccCccccCCC-CCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHH
Q 019298          226 VPMGVFGSTVPILTLGSLSKRWIVP-GWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQ  303 (343)
Q Consensus       226 ~~~~~~~~~~~~i~~~S~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~  303 (343)
                      .++. +   +-.++++|++|.++.+ +.+.|++++++       +++.++++..+. .....++.....+ ...|   ..
T Consensus       177 ~~l~-~---g~Di~v~S~tK~l~G~~~~~~G~v~~~~-------~~~~~~~~~~~~~~G~~~~~~~a~l~-~~~l---~t  241 (378)
T TIGR01329       177 NPLE-L---GADIVYHSATKFLAGHSDVMAGVLAVKG-------EEIAKKVYFLQNSTGSGLAPFDCWLL-LRGI---KT  241 (378)
T ss_pred             Chhh-c---CCcEEEEecceeccCCccceeEEEEeCc-------HHHHHHHHHHHHhcCCcCCHHHHHHH-HccC---CC
Confidence            1221 1   2239999999998764 47889988753       346666665544 2334455544433 2222   22


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCce
Q 019298          304 IMIHGNFLENFAGSCVPSYKLIPELI  329 (343)
Q Consensus       304 ~l~~~~~~~~~~~~~~~~L~~~~g~~  329 (343)
                      +-.+.++..++...+.+.|+++|.+.
T Consensus       242 l~~R~e~~~~na~~la~~L~~~~~v~  267 (378)
T TIGR01329       242 LAIRIEKQQENARAIAMFLSTHPRVK  267 (378)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence            33366667777777778888776654

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PLN02509 cystathionine beta-lyase

Probab=99.85  E-value=3e-19  Score=166.28  Aligned_cols=227  Identities=16%  Similarity=0.160  Sum_probs=159.3

Q ss_pred             CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH----HHhcCc
Q 019298           71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHI  146 (343)
Q Consensus        71 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g~  146 (343)
                      ..|... |.+ .++++.+++.+..    ..++.++++|+++++..++ .++++||+|+++.|.|+.+...    +...|.
T Consensus       125 ~~Y~r~-gnp-t~~aLE~~lA~le----g~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~  197 (464)
T PLN02509        125 YDYTRS-GNP-TRDALESLLAKLD----KADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGV  197 (464)
T ss_pred             CccCCC-CCH-HHHHHHHHHHHHh----CCCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCe
Confidence            357654 554 4666666665533    3567777788889997666 5678999999999999987643    445688


Q ss_pred             eeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCC
Q 019298          147 EVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV  226 (343)
Q Consensus       147 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~  226 (343)
                      +++.++.       .|++++++++++++++|++++|+||+|.+   .++++|+++|+++|+++|+|++|+..... .   
T Consensus       198 ~v~~vd~-------~d~e~l~~ai~~~TklV~lesPsNPtG~i---~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~-~---  263 (464)
T PLN02509        198 VVKRVNT-------TNLDEVAAAIGPQTKLVWLESPTNPRQQI---SDIRKIAEMAHAQGALVLVDNSIMSPVLS-R---  263 (464)
T ss_pred             EEEEeCC-------CCHHHHHHhCCcCCeEEEEECCCCCCCCH---HHHHHHHHHHHHcCCEEEEECCccccccC-C---
Confidence            8877743       36899999998889999999999999998   88999999999999999999998754322 1   


Q ss_pred             cccccCCCCCEEEEccCccccCCCCC-cEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHH
Q 019298          227 PMGVFGSTVPILTLGSLSKRWIVPGW-RLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQI  304 (343)
Q Consensus       227 ~~~~~~~~~~~i~~~S~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~  304 (343)
                      +..    .+..++++|++|.++.+|- -.|++++.+       +.+.++++..+.. ....+++..+++ ...|   ..+
T Consensus       264 pl~----~gaDivv~S~tK~l~G~gdv~gG~v~~~~-------~~l~~~~~~~~~~~g~~l~p~~A~l~-lr~L---~tL  328 (464)
T PLN02509        264 PLE----LGADIVMHSATKFIAGHSDVMAGVLAVKG-------EKLAKEVYFLQNSEGSGLAPFDCWLC-LRGI---KTM  328 (464)
T ss_pred             hhh----cCCcEEEecCcccccCCCccceeEEEecc-------HHHHHHHHHHHHhcCCCcCHHHHHHH-Hhhh---hhH
Confidence            111    1234999999999887554 456666533       2344544433322 223455544444 2222   233


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          305 MIHGNFLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       305 l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      -.+.++..++...+.+.|+.+|.+. ++.|
T Consensus       329 ~~R~~r~~~nA~~la~~L~~~p~V~~V~yP  358 (464)
T PLN02509        329 ALRIEKQQENARKIAMYLSSHPRVKKVYYA  358 (464)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence            3377888889999999999988876 5555

>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

Probab=99.85  E-value=2.5e-19  Score=166.50  Aligned_cols=284  Identities=19%  Similarity=0.094  Sum_probs=182.2

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC-C-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-F-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  110 (343)
                      +++.++||..|.-..+.++ .+|.+.+++++++.+.. . ..|.. ....+|.+.++++.        ..++++++++++
T Consensus        37 dG~~~lD~~~g~~~~~lGh-~~p~v~~A~~~~~~~~~~~~~~~~~-~~~~~la~~l~~~~--------~~~~v~~~~sGs  106 (406)
T PRK12381         37 QGKEYIDFAGGIAVNALGH-AHPALREALNEQASKFWHTGNGYTN-EPVLRLAKKLIDAT--------FADRVFFCNSGA  106 (406)
T ss_pred             CCCEEEEcCcCHhhccCCC-CCHHHHHHHHHHHhhcccccCccCC-HHHHHHHHHHHhhC--------CCCeEEEcCCcH
Confidence            3778999988754332333 48999999999987421 1 11211 11234555555443        347999999999


Q ss_pred             HHHHHHHHHhc--------CCCCeEEEeCCCCcchHHHHHhcCceeEE----eecCC--CCCCCCCHHHHHhhhcCCceE
Q 019298          111 QAIDVAMALLS--------RPGANILLPRPGFPIYELSAAFRHIEVRH----FDLLP--DKGWEVDLDDIESLADQNTVA  176 (343)
Q Consensus       111 ~al~~~~~~l~--------~~gd~vl~~~p~~~~~~~~~~~~g~~~~~----~~~~~--~~~~~~d~~~l~~~~~~~~~~  176 (343)
                      +|+..+++...        ....+|+..+.+|++....+...+.....    .++.+  ......|++.+++.+.+++.+
T Consensus       107 eA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aa  186 (406)
T PRK12381        107 EANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTCA  186 (406)
T ss_pred             HHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCeeE
Confidence            99999998852        13468999999998876544333321100    00000  001124789999988766666


Q ss_pred             EEEeCCCCCccccc--CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE
Q 019298          177 LVIINPGNPCGNVY--SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL  254 (343)
Q Consensus       177 i~~~~p~nptG~~~--~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~  254 (343)
                      +++ .|.|++|-+.  +.+.+++|.++|++||+++|+||+|.++.+.+.. .....++....   +.|+||+++ +|+|+
T Consensus       187 vii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~-~~~~~~~v~pD---i~t~sK~l~-gG~~i  260 (406)
T PRK12381        187 VIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGEL-YAYMHYGVTPD---VLTTAKALG-GGFPI  260 (406)
T ss_pred             EEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcch-hhhHhhCCCCC---EEEehhhhh-CCCce
Confidence            655 7999888654  7899999999999999999999999887665542 12112221122   358999987 79999


Q ss_pred             EEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCC-Cce-ee
Q 019298          255 GWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIP-ELI-NF  331 (343)
Q Consensus       255 G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~-g~~-~~  331 (343)
                      ||+++++        ++++.+.... ..+++.+++.++++ .+.|+.. +--+.+++++++.+.+.+.|+++. ... +.
T Consensus       261 g~~~~~~--------~~~~~~~~~~~~~t~~~~pl~~aaa-~a~l~~l-~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~  330 (406)
T PRK12381        261 GAMLTTE--------KCASVMTVGTHGTTYGGNPLASAVA-GKVLELI-NTPEMLNGVKQRHDWFVERLNTINARYGLFS  330 (406)
T ss_pred             EEEEEcH--------HHHhhcCCCCCCCCCCCCHHHHHHH-HHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhCCCEE
Confidence            9999853        6777776533 33456788888777 4444321 111277888888888888887651 121 11


Q ss_pred             -CCCCceEeeec
Q 019298          332 -KSTGSSLKYLD  342 (343)
Q Consensus       332 -~~~~g~~~~~~  342 (343)
                       ....|.++|+.
T Consensus       331 ~vrg~Gl~~~~~  342 (406)
T PRK12381        331 EIRGLGLLIGCV  342 (406)
T ss_pred             EEecCeEEEEEE
Confidence             22346776664

>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA

Probab=99.85  E-value=3.5e-19  Score=164.09  Aligned_cols=266  Identities=16%  Similarity=0.127  Sum_probs=170.5

Q ss_pred             CcHHHHHHHHHHHhcC--CCCCCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc------CC
Q 019298           53 TTHVATEAVAEALLSE--KFNGYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS------RP  123 (343)
Q Consensus        53 ~~~~~~~~~~~~~~~~--~~~~Y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~------~~  123 (343)
                      +.+.+.+++...+...  ....|+. ..-..++++.+++++      +++++++++++|+++++..++.++.      ++
T Consensus        32 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  105 (373)
T TIGR03812        32 PHPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLL------HLPDAYGYIVSGGTEANIQAVRAAKNLAREEKR  105 (373)
T ss_pred             chHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHh------CCCCCCeEEeccHHHHHHHHHHHHHHHHhccCC
Confidence            3455566666664432  1222321 011145666666666      3466788899999999988776653      46


Q ss_pred             CCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHh
Q 019298          124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETAN  203 (343)
Q Consensus       124 gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~  203 (343)
                      ||+|++++++|..+...++..|.+++.++.+  .++.+|++++++.+.+++..++++.|+||||...   ++++|+++|+
T Consensus       106 g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~---~~~~i~~l~~  180 (373)
T TIGR03812       106 TPNIIVPESAHFSFEKAAEMLGLELRYAPLD--EDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQID---DIEELSKIAL  180 (373)
T ss_pred             CcEEEECCcchHHHHHHHHHcCCeEEEEeeC--CCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccC---CHHHHHHHHH
Confidence            7899999999999999999999999999875  3567899999999877776566666899999994   5677888888


Q ss_pred             hcCcEEEEccCCCccccC--C--CCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh
Q 019298          204 KLKTLVIADEVYGHLVFG--D--KPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF  279 (343)
Q Consensus       204 ~~~~~~i~D~ay~~~~~~--~--~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~  279 (343)
                      ++|+++|+|++|+.+...  .  .....+. +...+-..+..|.+| |++++.+.|+++..+       +++++.++...
T Consensus       181 ~~~~~livD~a~~~~~~~~~~~~~~~~~~d-~~~~~~d~~~~s~~K-~~~~~~~~G~~~~~~-------~~~~~~l~~~~  251 (373)
T TIGR03812       181 ENGIYLHVDAAFGGFVIPFLKKGYNPPPFD-FSLPGVQSITIDPHK-MGLSPIPAGGILFRS-------KSYLKYLSVDA  251 (373)
T ss_pred             HcCCeEEEEcCchhHHHHHHhcCCCCCCcc-ccCCCCCEEEECccc-cCCCcCCceEEEEeC-------HHHHhhhcccC
Confidence            999999999999865321  0  0000110 000011245567889 578888898777643       34666554221


Q ss_pred             cc-c--------cCcchHHHHHHHhccchhh-HH-HHHHHHHHHHHHHHHHHhhcCCCCce-eeCCCCceEeee
Q 019298          280 DI-L--------GDPATFIQVCIMYGCLSTI-MQ-IMIHGNFLENFAGSCVPSYKLIPELI-NFKSTGSSLKYL  341 (343)
Q Consensus       280 ~~-~--------~~~~~~~~~a~~~~~l~~~-~~-~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~~~g~~~~~  341 (343)
                      .. .        +..+.....++ .++|... .+ +-+.++++.++++.+.+.|+++ |+. +..+. ..++.+
T Consensus       252 ~~~~~~~~~~~~gt~~~~~~~~~-~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-~~~v~~  322 (373)
T TIGR03812       252 PYLTVKKQATITGTRSGASAAAT-YAVIKYLGREGYRKIVAECMENTRYLVEELKKI-GFEPVIEPV-LNIVAF  322 (373)
T ss_pred             cccCCCCCcceEeechhHHHHHH-HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEcCCC-ceEEEE
Confidence            11 0        12223333333 4444421 12 2237888999999999999988 554 43333 344443

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.

>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional

Probab=99.85  E-value=1.6e-19  Score=166.09  Aligned_cols=250  Identities=16%  Similarity=0.140  Sum_probs=167.5

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEe
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP  130 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~  130 (343)
                      .++.+.+++++.+... .....|.  .-..++|+.++++++    ..-..+.|++++|++.++..++.++..+||.|++.
T Consensus        14 ~~~~~~~~~a~~~~~~-~~~~~~~--~~~~~~~~~l~~l~~----~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~   86 (368)
T PRK13479         14 LTTSRTVREAMLRDWG-SWDDDFN--ALTASVRAKLVAIAT----GEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVP   86 (368)
T ss_pred             CCCCHHHHHHhCCCCC-CCChHHH--HHHHHHHHHHHHHhC----CCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEE
Confidence            4567777777655431 1111122  234567777777763    11123568899999999999999999999999999


Q ss_pred             CCCCcch--HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC--CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcC
Q 019298          131 RPGFPIY--ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--NTVALVIINPGNPCGNVYSYQHLQKLAETANKLK  206 (343)
Q Consensus       131 ~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~  206 (343)
                      .++|.+.  ...++..|.+++.++...  ++.+|++++++.+++  +++++++++|+||||...+   +++|.++|++++
T Consensus        87 ~~~~~~~~~~~~~~~~g~~~~~i~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~~  161 (368)
T PRK13479         87 DNGAYGARIAQIAEYLGIAHVVLDTGE--DEPPDAAEVEAALAADPRITHVALVHCETTTGILNP---LDEIAAVAKRHG  161 (368)
T ss_pred             eCCchHHHHHHHHHHcCCcEEEEECCC--CCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC---HHHHHHHHHHcC
Confidence            8888665  367788899999998753  356899999998864  4567889999999999976   567788888999


Q ss_pred             cEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCcccc-CCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-----
Q 019298          207 TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-----  280 (343)
Q Consensus       207 ~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-----  280 (343)
                      +++|+|+++..   +.. +..+...   +..+++.|++|.+ +.+|  +||++++.        ++++++.....     
T Consensus       162 ~~livDa~~~~---g~~-~~~~~~~---~~d~~v~s~~K~l~g~~G--~G~l~~~~--------~~~~~~~~~~~~~~~~  224 (368)
T PRK13479        162 KRLIVDAMSSF---GAI-PIDIAEL---GIDALISSANKCIEGVPG--FGFVIARR--------SELEACKGNSRSLSLD  224 (368)
T ss_pred             CEEEEEccccc---CCc-ccccccc---CceEEEecCccccccCCC--ceEEEECH--------HHHHHhhcCCCCeeec
Confidence            99999966533   222 1222222   2237778999975 5677  69999853        56665543211     


Q ss_pred             -------------cccCcchHHHHHHHhccchhh--H-HHHHHHHHHHHHHHHHHHhhcCCCCceee
Q 019298          281 -------------ILGDPATFIQVCIMYGCLSTI--M-QIMIHGNFLENFAGSCVPSYKLIPELINF  331 (343)
Q Consensus       281 -------------~~~~~~~~~~~a~~~~~l~~~--~-~~l~~~~~~~~~~~~~~~~L~~~~g~~~~  331 (343)
                                   ....++.....++ .+++...  . .+-+.+++++++++.+.+.|+++ |+.+.
T Consensus       225 ~~~~~~~~~~~~~~~~t~~~~~~~~l-~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~  289 (368)
T PRK13479        225 LYDQWAYMEKTGQWRFTPPTHVVAAF-YQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFEPL  289 (368)
T ss_pred             HHHHHhhhcccCCCCCCCcHHHHHHH-HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCccc
Confidence                         0113344443333 2333211  1 12236788999999999999888 77743

>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed

Probab=99.85  E-value=2.6e-19  Score=166.48  Aligned_cols=277  Identities=14%  Similarity=0.079  Sum_probs=180.5

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      ++++++|+..|.-.. +.--.+|.+.++++++++.... ..+.......+|.+.+++++        ..+.+++++++++
T Consensus        39 ~g~~~lD~~~~~~~~-~~Gh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~SGs~  109 (401)
T PRK00854         39 DGNRYLDCLSAYSAV-NQGHCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALT--------GSHKVLPMNSGAE  109 (401)
T ss_pred             CCCEEEEcCcchhhc-cCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhC--------CCCEEEEeCCcHH
Confidence            377889988775321 1112589999999999875322 11112223445666666664        2468999999999


Q ss_pred             HHHHHHHHhcC---------CC-CeEEEeCCCCcchHHHHHhcCce-------------eEEeecCCCCCCCCCHHHHHh
Q 019298          112 AIDVAMALLSR---------PG-ANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPDKGWEVDLDDIES  168 (343)
Q Consensus       112 al~~~~~~l~~---------~g-d~vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~~~l~~  168 (343)
                      |+..+++.+..         +| ++|++..-+|.+....+...+..             +..++       ..|++.+++
T Consensus       110 A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~le~  182 (401)
T PRK00854        110 AVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVP-------FGDAEALEA  182 (401)
T ss_pred             HHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeC-------CCCHHHHHH
Confidence            99999998842         23 57787777776654333332221             11111       147899999


Q ss_pred             hhcCCceEEEEeCCCCCcccccCH-HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCcccc
Q 019298          169 LADQNTVALVIINPGNPCGNVYSY-QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW  247 (343)
Q Consensus       169 ~~~~~~~~i~~~~p~nptG~~~~~-~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~  247 (343)
                      .+.+++++|++++|+||+|.+++. +.+++|.++|++||+++|+||+|.++.+.+... .....+.... +++  ++|.+
T Consensus       183 ~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~-~~~~~g~~~D-~~~--~~K~l  258 (401)
T PRK00854        183 AITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLL-AEEHEGIEAD-VTL--IGKAL  258 (401)
T ss_pred             HhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHh-HHhhcCCCCC-EEE--ecccc
Confidence            998889999999999999999874 569999999999999999999998765544211 1111111112 333  37998


Q ss_pred             CCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 019298          248 IVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIP  326 (343)
Q Consensus       248 ~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~  326 (343)
                      +...+|+||+++++        ++++.++... ...++.+++.++++ .+.|+...+ .+..++++++.+.+.+.|+++ 
T Consensus       259 ~gg~~~ig~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aa~-~a~L~~l~~-~~~~~~~~~~~~~l~~~L~~~-  327 (401)
T PRK00854        259 SGGFYPVSAVLSNS--------EVLGVLKPGQHGSTFGGNPLACAVA-RAALKVLTE-EGMIENAAEMGAYFLEGLRSI-  327 (401)
T ss_pred             cCCccCeEEEEEcH--------HHHhcccCCCCCCCCCcCHHHHHHH-HHHHHHHHH-cCHHHHHHHHHHHHHHHHHhh-
Confidence            76558999999853        6777665432 22445688888777 555543211 116778888888888888876 


Q ss_pred             Cce---eeCCCCceEee
Q 019298          327 ELI---NFKSTGSSLKY  340 (343)
Q Consensus       327 g~~---~~~~~~g~~~~  340 (343)
                      +..   ...+.|.++.|
T Consensus       328 ~~~~~~~~~g~g~~~~i  344 (401)
T PRK00854        328 RSNIVREVRGRGLMLAV  344 (401)
T ss_pred             ccCceEEEeccceEEEE
Confidence            222   12445555544

>PRK08064 cystathionine beta-lyase; Provisional

Probab=99.85  E-value=2.6e-19  Score=165.03  Aligned_cols=218  Identities=16%  Similarity=0.114  Sum_probs=154.3

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchH----HHHHhcCceeEEeec
Q 019298           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRHIEVRHFDL  153 (343)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~  153 (343)
                      ...+|++.+|++++      .. +.++ +++++.++..++. ++++||+|+++.|.|+...    ..++..|.+++.++.
T Consensus        55 ~~~~le~~lA~l~g------~~-~~v~-~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~  125 (390)
T PRK08064         55 TREALEDIIAELEG------GT-KGFA-FASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDM  125 (390)
T ss_pred             hHHHHHHHHHHHhC------CC-CeEE-ECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECC
Confidence            35689999999983      22 3444 4555778888886 6789999999999997533    344567988888865


Q ss_pred             CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (343)
Q Consensus       154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~  233 (343)
                      .       |++++++.+++++++|++++|+||||.+.   ++++|.++|+++|+++|+|++|......    .+. .+  
T Consensus       126 ~-------d~~~l~~~l~~~tklV~l~~p~NptG~~~---dl~~I~~la~~~g~~vvvD~a~~~~~~~----~~~-~~--  188 (390)
T PRK08064        126 T-------NLEEVAQNIKPNTKLFYVETPSNPLLKVT---DIRGVVKLAKAIGCLTFVDNTFLTPLLQ----KPL-DL--  188 (390)
T ss_pred             C-------CHHHHHHhcCCCceEEEEECCCCCCcEec---cHHHHHHHHHHcCCEEEEECCCCccccc----Cch-hh--
Confidence            2       68999999988899999999999999995   5778888899999999999999864321    111 11  


Q ss_pred             CCCEEEEccCccccCCC-CCcEEEEEEeCCCCCCCchHHHHHHhhhhcccc-CcchHHHHHHHhccchhhHHHHHHHHHH
Q 019298          234 TVPILTLGSLSKRWIVP-GWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPATFIQVCIMYGCLSTIMQIMIHGNFL  311 (343)
Q Consensus       234 ~~~~i~~~S~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~a~~~~~l~~~~~~l~~~~~~  311 (343)
                       +..+++.|+||.++.+ |...|++++.+       ++++++++......+ ..++.....+ ..-+   ..+-.+.++.
T Consensus       189 -g~Divv~S~tK~~~G~~~~laG~~v~~~-------~~~~~~l~~~~~~~g~~~~~~~a~l~-~~gl---~tl~~R~~~~  256 (390)
T PRK08064        189 -GADVVLHSATKFLAGHSDVLAGLAVVKD-------EELAQKLYFLQNSFGAVLGVQDCWLV-LRGL---KTLHVRLEHS  256 (390)
T ss_pred             -CCcEEEeecceeccCCccceeEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHH-Hccc---CcHHHHHHHH
Confidence             3458999999998754 35678777643       468888877765322 3333333333 1221   2222377777


Q ss_pred             HHHHHHHHHhhcCCCCce-eeCC
Q 019298          312 ENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       312 ~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      .++...+.+.|+++|.+. ++.|
T Consensus       257 ~~~a~~la~~L~~~~~v~~v~yp  279 (390)
T PRK08064        257 SETANKIALYLQEHPKVQNVYYP  279 (390)
T ss_pred             HHHHHHHHHHHhcCCCcceEECC
Confidence            888888899998877654 4443

>PRK08088 4-aminobutyrate aminotransferase; Validated

Probab=99.85  E-value=3.4e-19  Score=166.41  Aligned_cols=288  Identities=13%  Similarity=0.114  Sum_probs=175.2

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      ++.++||..|.....  ++ .+|.+.+++.+++.+... .+.+..+.+. ...+++.+....+.+.. ++++++++++++
T Consensus        40 G~~~lD~~~g~~~~~--lGh~~~~i~~a~~~~~~~~~~-~~~~~~~~~~-~~~la~~l~~~~~~~~~-~~~~f~~sGsea  114 (425)
T PRK08088         40 GREYLDFAGGIAVLN--TGHLHPKVVAAVEAQLKKLSH-TCFQVLAYEP-YLELCEKMNQKVPGDFA-KKTLLVTTGSEA  114 (425)
T ss_pred             CCEEEEcCCchhhcC--CCCCCHHHHHHHHHHHhhCCC-ccccccCCHH-HHHHHHHHHHhCCCCCC-CEEEEeCCcHHH
Confidence            788999988875422  33 689999999999875422 2222223333 34777777654432222 467777777787


Q ss_pred             HHHHHHHh---cCCCCeEEEeCCCCcchHHHHHhcCceeEE----------------eecCCCCCCCC--CHHHHHhhhc
Q 019298          113 IDVAMALL---SRPGANILLPRPGFPIYELSAAFRHIEVRH----------------FDLLPDKGWEV--DLDDIESLAD  171 (343)
Q Consensus       113 l~~~~~~l---~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~----------------~~~~~~~~~~~--d~~~l~~~~~  171 (343)
                      ++.+++..   .++ ..|+..+++|++....+...+.....                ++... ++...  +++.+++.+.
T Consensus       115 ~e~Alklar~~~~r-~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~l~~~l~  192 (425)
T PRK08088        115 VENAVKIARAATKR-SGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPL-HGVSEDDAIASIERIFK  192 (425)
T ss_pred             HHHHHHHHHHHhCC-CeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccc-cCccHHHHHHHHHHHHH
Confidence            77776654   334 46667799998877665554432110                11100 11111  1456777764


Q ss_pred             ----CCceEEEEeCC--CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCcc
Q 019298          172 ----QNTVALVIINP--GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK  245 (343)
Q Consensus       172 ----~~~~~i~~~~p--~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK  245 (343)
                          .+..+.++..|  ++++....+.+.+++|.++|++||+++|+||+|.++.+.+.. ..+.   ..+.+..+.||||
T Consensus       193 ~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~-~~~~---~~~~~pdi~s~sK  268 (425)
T PRK08088        193 NDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTL-FAME---QMGVAADLTTFAK  268 (425)
T ss_pred             hccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcch-hHHh---hcCCCCCEEEEec
Confidence                23334555556  677777889999999999999999999999999987554431 1211   1123345789999


Q ss_pred             ccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhh--HHHHH-HHHHHHHHHHHHHHh
Q 019298          246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTI--MQIMI-HGNFLENFAGSCVPS  321 (343)
Q Consensus       246 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~--~~~l~-~~~~~~~~~~~~~~~  321 (343)
                      .++ +|+|+||++++.        ++++.+..... .+.+.+++.|.++ .+.|+..  .+.++ .++..++.++.+.+.
T Consensus       269 ~l~-~G~rig~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l  338 (425)
T PRK08088        269 SIA-GGFPLAGVTGRA--------EVMDAIAPGGLGGTYAGNPIACAAA-LAVLKVFEQENLLQKANALGEKLKDGLLAI  338 (425)
T ss_pred             ccc-CCCcceeeEecH--------HHHhhcCCCCCCCCCCcCHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence            986 899999999953        67777765432 3567788888888 5555432  12222 333333333334333


Q ss_pred             hcCCCCceeeCCCCceEeeecC
Q 019298          322 YKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       322 L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +...|.+....+. |+++|+.|
T Consensus       339 ~~~~~~~~~v~g~-G~~~~l~l  359 (425)
T PRK08088        339 AEKHPEIGDVRGL-GAMIAIEL  359 (425)
T ss_pred             HHhCCCeEEEecc-ceEEEEEE
Confidence            3445543321222 88899864

>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase

Probab=99.85  E-value=3.8e-19  Score=163.26  Aligned_cols=222  Identities=12%  Similarity=0.123  Sum_probs=155.5

Q ss_pred             HHHHHHHHHHHhhhCCCCCCC--CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcch--HHHHHhcCceeEEeecCC
Q 019298           80 PLTRRAIAEYLSRDLPYKLTP--NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIY--ELSAAFRHIEVRHFDLLP  155 (343)
Q Consensus        80 ~~lr~~ia~~~~~~~~~~~~~--~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~  155 (343)
                      .++|+.+++++      +.++  +.|++|+|+++++..++.++..+||.+++..+.+.+.  ...++..|.+++.++.+ 
T Consensus        38 ~~~r~~la~l~------~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~-  110 (363)
T TIGR02326        38 EQIRQQLLALA------TAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDTG-  110 (363)
T ss_pred             HHHHHHHHHHh------CCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCC-
Confidence            45677777777      3344  4799999999999999999988888877776666443  35677889999988875 


Q ss_pred             CCCCCCCHHHHHhhhcC--CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298          156 DKGWEVDLDDIESLADQ--NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (343)
Q Consensus       156 ~~~~~~d~~~l~~~~~~--~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~  233 (343)
                       .+..+|++.+++.++.  +++++++++++||||..++   +++|+++|+++|+++|+|++++.   +. .+..+..++ 
T Consensus       111 -~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~g~~livD~~~~~---g~-~~~~~~~~~-  181 (363)
T TIGR02326       111 -EVEPPDVVEVEAILAADPAITHIALVHCETTTGILNP---IEAVAKLAHRHGKVTIVDAMSSF---GG-IPIDIAELH-  181 (363)
T ss_pred             -CCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCc---HHHHHHHHHHcCCEEEEEccccc---cC-cccchhhcC-
Confidence             3456899999998864  3467788899999999976   57889999999999999988764   22 222333332 


Q ss_pred             CCCEEEEccCcccc-CCCCCcEEEEEEeCCCCCCCchHHHHHHhhh------------------hc-cccCcchHHHHHH
Q 019298          234 TVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKKY------------------FD-ILGDPATFIQVCI  293 (343)
Q Consensus       234 ~~~~i~~~S~sK~~-~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~------------------~~-~~~~~~~~~~~a~  293 (343)
                        ..+++.|++|.+ +.+|  +||++++.        +.++++...                  .. ..+.++...+.++
T Consensus       182 --~D~~~~s~~K~l~~p~G--~G~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al  249 (363)
T TIGR02326       182 --IDYLISSANKCIQGVPG--FGFVIARQ--------AELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAF  249 (363)
T ss_pred             --ccEEEecCccccccCCc--ceEEEECH--------HHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHH
Confidence              338889999986 4456  79999864        344443210                  00 1124455555555


Q ss_pred             Hhccchhh-HH--HHHHHHHHHHHHHHHHHhhcCCCCceee
Q 019298          294 MYGCLSTI-MQ--IMIHGNFLENFAGSCVPSYKLIPELINF  331 (343)
Q Consensus       294 ~~~~l~~~-~~--~l~~~~~~~~~~~~~~~~L~~~~g~~~~  331 (343)
                       ..++... .+  +-+.+++++++++++.+.|+++ |+.+.
T Consensus       250 -~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~  288 (363)
T TIGR02326       250 -AQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL-GFEPL  288 (363)
T ss_pred             -HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCeec
Confidence             3333321 11  2237788999999999999887 77643

Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.

>PRK05967 cystathionine beta-lyase; Provisional

Probab=99.85  E-value=5.2e-19  Score=161.57  Aligned_cols=202  Identities=15%  Similarity=0.090  Sum_probs=146.5

Q ss_pred             cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH----HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEE
Q 019298          102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL  177 (343)
Q Consensus       102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i  177 (343)
                      ..++++++++|+..++.+++++||+|+++.|.|+++..    .++..|.++..++..       +.+.+++++++++++|
T Consensus        81 ~~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~-------~~e~l~~al~~~TklV  153 (395)
T PRK05967         81 GTILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE-------IGAGIAKLMRPNTKVV  153 (395)
T ss_pred             CEEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC-------CHHHHHHhcCcCceEE
Confidence            44555557999999999999999999999999998764    446678888877431       3577999998899999


Q ss_pred             EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCC-CcEEE
Q 019298          178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-WRLGW  256 (343)
Q Consensus       178 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~  256 (343)
                      ++++|+||++..   .++++|+++|+++|+++|+|++|....+-    .++ .+   +-.+++.|.+|.++..| ...|+
T Consensus       154 ~lesPsNP~l~v---~dl~~I~~la~~~g~~vvVD~t~a~p~~~----~pl-~~---GaDivv~S~tKy~~Gh~d~~~G~  222 (395)
T PRK05967        154 HTEAPGSNTFEM---QDIPAIAEAAHRHGAIVMMDNTWATPLYF----RPL-DF---GVDISIHAATKYPSGHSDILLGT  222 (395)
T ss_pred             EEECCCCCCCcH---HHHHHHHHHHHHhCCEEEEECCccCceec----Chh-Hc---CCCEEEEecccccCCCCCeeEEE
Confidence            999999998766   89999999999999999999999863211    111 12   23499999999987755 55554


Q ss_pred             EEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          257 FVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       257 i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      ++. +       +++.++++.... .....++.....+ ..-|   ..+.-+.++..++...+.+.|+++|.+. ++.|
T Consensus       223 v~~-~-------~~~~~~l~~~~~~~G~~~~p~da~l~-~rgl---~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yP  289 (395)
T PRK05967        223 VSA-N-------EKCWPQLLEAHGTLGLCAGPDDTYQI-LRGL---RTMGIRLEHHRKSALEIARWLEGRPDVARVLHP  289 (395)
T ss_pred             EEc-C-------HHHHHHHHHHHHHcCCCCCHHHHHHH-HcCc---ccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECC
Confidence            443 3       245555553332 2345566655544 2221   2233377888888889999999988776 5555

>PRK04260 acetylornithine aminotransferase; Provisional

Probab=99.84  E-value=1.4e-18  Score=160.05  Aligned_cols=284  Identities=13%  Similarity=0.048  Sum_probs=184.7

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a  112 (343)
                      ++.++||..|.-.  .+++.+|++.+++.+++....  .++. ....++++.+++.+..      .++ .++++++++++
T Consensus        28 g~~~lD~~s~~~~--~~lG~~p~v~~a~~~~~~~~~--~~~~-~~~~~~~~~la~~l~~------~~~~~~~~~~SGseA   96 (375)
T PRK04260         28 GKKYLDFSSGIGV--TNLGFHPQVQQALQKQAGLIW--HSPN-LYLNSLQEEVAQKLIG------DKDYLAFFCNSGAEA   96 (375)
T ss_pred             CCEEEECCCCccc--ccCCCCHHHHHHHHHHHHhcC--cccC-ccCCHHHHHHHHHHhc------CcCCEEEEcCccHHH
Confidence            7789999877422  335668999999999987531  2322 3456788999987732      234 46888999999


Q ss_pred             HHHHHHHhc--CCCCeEEEeCCCCcchH-HHHHhcCceeE--EeecC-CCCC--CCCCHHHHHhhhcCCceEEEEeCCCC
Q 019298          113 IDVAMALLS--RPGANILLPRPGFPIYE-LSAAFRHIEVR--HFDLL-PDKG--WEVDLDDIESLADQNTVALVIINPGN  184 (343)
Q Consensus       113 l~~~~~~l~--~~gd~vl~~~p~~~~~~-~~~~~~g~~~~--~~~~~-~~~~--~~~d~~~l~~~~~~~~~~i~~~~p~n  184 (343)
                      +..+++...  ..+++|++.+.+|++.. ......+.+..  .+... ....  ...|++.+++.+.++..++++..++|
T Consensus        97 ~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l~~~~a~vi~e~v~~  176 (375)
T PRK04260         97 NEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALVNKNTAAVMLELVQG  176 (375)
T ss_pred             HHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhcCCCeEEEEECCeEC
Confidence            998888763  34578888888887533 23322222110  00000 0000  01378999988876777888888899


Q ss_pred             Cccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCC
Q 019298          185 PCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPC  263 (343)
Q Consensus       185 ptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~  263 (343)
                      ++|... +.+.++++.++|+++|+++|+||+|.++...+... ........++   +.||||+++ +|+|+||+++++  
T Consensus       177 ~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~-~~~~~~~~pd---i~t~sK~l~-~G~~ig~~~~~~--  249 (375)
T PRK04260        177 ESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLY-AFEHYGIEPD---IFTLAKGLA-NGVPVGAMLAKS--  249 (375)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchh-hhHhhCCCCC---EEEeccccc-CCcceEEEEEcH--
Confidence            999874 56789999999999999999999998875544321 2111222223   338999975 789999999963  


Q ss_pred             CCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhh--HHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEe
Q 019298          264 GMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTI--MQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLK  339 (343)
Q Consensus       264 ~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~--~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~  339 (343)
                            ++.+.+.... ..+.+.+++.+.++ .+.|+..  ..+++ .++..+..++.+.+.+.+.+.+.. .+..|+++
T Consensus       250 ------~~~~~~~~~~~~~t~~~~~~~~~aa-~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~g~~~  321 (375)
T PRK04260        250 ------SLGGAFGYGSHGSTFGGNKLSMAAA-SATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTT-VRGLGYMI  321 (375)
T ss_pred             ------HHHhhcCCCCCCCCCCcCHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeE-EeccceEE
Confidence                  5666665432 23456678888777 5655432  23333 556666666667666666643332 23379999


Q ss_pred             eecC
Q 019298          340 YLDL  343 (343)
Q Consensus       340 ~~~l  343 (343)
                      |++|
T Consensus       322 ~~~~  325 (375)
T PRK04260        322 GIET  325 (375)
T ss_pred             EEEe
Confidence            9864

>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated

Probab=99.84  E-value=4.7e-19  Score=162.50  Aligned_cols=225  Identities=15%  Similarity=0.103  Sum_probs=153.3

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchH----HHHHhcC
Q 019298           70 FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRH  145 (343)
Q Consensus        70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g  145 (343)
                      +.+|+.+ -...|++.++++.+        .+..+++++++.++..++ .++++||+|++++|.|+...    ..+...|
T Consensus        44 y~r~~~p-~~~~Le~~la~l~g--------~~~al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~g  113 (380)
T PRK06176         44 YSRSGNP-TRFALEELIADLEG--------GVKGFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNG  113 (380)
T ss_pred             ccCCCCh-hHHHHHHHHHHHhC--------CCCEEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcC
Confidence            3444442 36789999999883        334455566677998766 56789999999999997543    3345567


Q ss_pred             ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (343)
Q Consensus       146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~  225 (343)
                      .++..++.       .|++++++++++++++|++++|+||||.+.+   +++|+++|+++|+++|+|++|+...+. .  
T Consensus       114 i~v~~vd~-------~d~e~l~~ai~~~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~-~--  180 (380)
T PRK06176        114 LSCTIIDT-------SDLSQIKKAIKPNTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQ-N--  180 (380)
T ss_pred             eEEEEcCC-------CCHHHHHHhcCcCceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccC-C--
Confidence            77776643       3789999999888999999999999999954   678888899999999999999864332 1  


Q ss_pred             CcccccCCCCCEEEEccCccccCCCCCcE-EEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHH
Q 019298          226 VPMGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQ  303 (343)
Q Consensus       226 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~  303 (343)
                       ++ .+   +..+++.|++|.++.+|..+ |++++.+       +++.++++..+.. ....++.....+ ...+   ..
T Consensus       181 -p~-~~---gaDivv~S~tK~l~g~~d~~gG~vv~~~-------~~~~~~~~~~~~~~G~~~~~~~~~l~-~~gl---~t  244 (380)
T PRK06176        181 -PL-LL---GADIVVHSGTKYLGGHSDVVAGLVTTNN-------EALAQEIAFFQNAIGGVLGPQDSWLL-QRGI---KT  244 (380)
T ss_pred             -cc-cc---CCCEEEecCceeccCCccceeeEEEecH-------HHHHHHHHHHHHHhcCCCCHHHHHHH-Hhcc---Cc
Confidence             11 11   23399999999998877544 4455432       3566767655443 223344433333 1111   11


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          304 IMIHGNFLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       304 ~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      +-.+.++..++...+.+.|++.|.+. ++.|
T Consensus       245 l~~R~~~~~~~a~~la~~L~~~p~v~~v~~p  275 (380)
T PRK06176        245 LGLRMEAHQKNALCVAEFLEKHPKVEKVYYP  275 (380)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCeeEEECC
Confidence            11255666677788888888877765 4444

>PTZ00125 ornithine aminotransferase-like protein; Provisional

Probab=99.83  E-value=1.4e-18  Score=161.60  Aligned_cols=286  Identities=13%  Similarity=0.070  Sum_probs=171.5

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++.++||..|.-.  ..++ .+|.+.+++.++++.... ....  -..+..+.+.+.+.+..    ..+.+++++++++
T Consensus        29 dg~~~lD~~~~~~~--~~~Gh~~p~v~~a~~~~~~~~~~-~~~~--~~~~~~~~~~~~l~~~~----~~~~~~~~~SGs~   99 (400)
T PTZ00125         29 EGKKYYDFLSAYSA--VNQGHCHPKILAALINQAQKLTL-TSRA--FYNDVLGLAEKYITDLF----GYDKVLPMNSGAE   99 (400)
T ss_pred             CCCEEEEcccCHhh--ccCCcCCHHHHHHHHHHHHhccc-cccc--ccCHHHHHHHHHHHhCC----CCCEEEEeCCcHH
Confidence            37889999887533  1122 689999999998764321 1111  11223344444443322    2368999999999


Q ss_pred             HHHHHHHHhcC----------CCCeEEEeCCCCcchHHHHHhcCceeEEe----ecCCC--CCCCCCHHHHHhhhc-CCc
Q 019298          112 AIDVAMALLSR----------PGANILLPRPGFPIYELSAAFRHIEVRHF----DLLPD--KGWEVDLDDIESLAD-QNT  174 (343)
Q Consensus       112 al~~~~~~l~~----------~gd~vl~~~p~~~~~~~~~~~~g~~~~~~----~~~~~--~~~~~d~~~l~~~~~-~~~  174 (343)
                      ++..+++.+..          .+++|+..+-+|.+...............    +..+.  .-...|++++++.++ +++
T Consensus       100 A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~  179 (400)
T PTZ00125        100 AGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNV  179 (400)
T ss_pred             HHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCe
Confidence            99999987741          34678888888876544333322111100    00000  000137999999886 567


Q ss_pred             eEEEEeCCCCCcccccC-HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCc
Q 019298          175 VALVIINPGNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWR  253 (343)
Q Consensus       175 ~~i~~~~p~nptG~~~~-~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r  253 (343)
                      +++++..++||||.+++ .+.+++|.++|++||+++|+||+|.++.+.+... .......... ++  ++||.++.+++|
T Consensus       180 ~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~-~~~~~~~~pd-~~--~~sK~l~~g~~~  255 (400)
T PTZ00125        180 AAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLL-AHDHEGVKPD-IV--LLGKALSGGLYP  255 (400)
T ss_pred             EEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhh-HHHhcCCCCC-EE--EEcccccCCCcC
Confidence            77877777999999986 5569999999999999999999998776554321 1111111112 33  468998765579


Q ss_pred             EEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC----CCCc
Q 019298          254 LGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL----IPEL  328 (343)
Q Consensus       254 ~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~----~~g~  328 (343)
                      +||+++++        ++++.+.... ..+.+.+++.+.++ .+.|+...+ .+..++++++.+.+.+.|++    .+.+
T Consensus       256 ig~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~~aa-~~~l~~i~~-~~~~~~~~~~~~~l~~~l~~l~~~~~~~  325 (400)
T PTZ00125        256 ISAVLAND--------DVMLVIKPGEHGSTYGGNPLACAVA-VEALEVLKE-EKLAENAQRLGEVFRDGLKELLKKSPWV  325 (400)
T ss_pred             cEEEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHH-HHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence            99999863        6777765442 22456677777776 444432110 01444555555656565544    2322


Q ss_pred             eeeCCCCceEeeec
Q 019298          329 INFKSTGSSLKYLD  342 (343)
Q Consensus       329 ~~~~~~~g~~~~~~  342 (343)
                      ....+ .|.++|+.
T Consensus       326 ~~~~~-~g~~~~v~  338 (400)
T PTZ00125        326 KEIRG-KGLLNAIV  338 (400)
T ss_pred             EEEec-ccEEEEEE
Confidence            22344 45565553

>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.83  E-value=2.4e-18  Score=160.18  Aligned_cols=226  Identities=16%  Similarity=0.101  Sum_probs=158.0

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH----HHHhcCceeEEeec
Q 019298           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFDL  153 (343)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~~  153 (343)
                      ....|++.++++.+        .+..++++++++++..++.+++++||+|+++.++|.....    .+...|.+++.++.
T Consensus        64 ~~~~le~~lA~l~g--------~~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~  135 (427)
T PRK05994         64 TNAVLEERVAALEG--------GTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA  135 (427)
T ss_pred             cHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC
Confidence            35678899998883        3467888999999999999999999999999999986433    35667888887754


Q ss_pred             CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (343)
Q Consensus       154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~  233 (343)
                             .|++.+++++++++++|++++|+||+|.+++   +++|+++|+++|+++|+|++|+....    ..++ .+  
T Consensus       136 -------~d~~~l~~ai~~~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~~----~~pl-~~--  198 (427)
T PRK05994        136 -------DDPASFERAITPRTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPYL----IRPI-EH--  198 (427)
T ss_pred             -------CCHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCcccccc----CCcc-cc--
Confidence                   2789999999888999999999999999965   67888889999999999999985221    1111 12  


Q ss_pred             CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCC-c----------hH-----HH-----------HHHhhhhccccCcc
Q 019298          234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR-K----------PK-----VV-----------ERMKKYFDILGDPA  286 (343)
Q Consensus       234 ~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~-~----------~~-----~~-----------~~l~~~~~~~~~~~  286 (343)
                       +-.+++.|++|.++.+|-.+|.+++....+-+. +          +.     +.           ...+.........+
T Consensus       199 -gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~  277 (427)
T PRK05994        199 -GADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAIS  277 (427)
T ss_pred             -CCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCC
Confidence             233999999999998888788777642211100 0          00     11           11111222233445


Q ss_pred             hHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          287 TFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       287 ~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      ++..+.+ ..-|   ..+-.+.++..++...+.+.|+.+|++. ++.|
T Consensus       278 ~~~A~l~-~~~l---~tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP  321 (427)
T PRK05994        278 PFNAFLI-LTGI---ETLPLRMQRHSDNALAVAEWLKGHPKVSWVNYA  321 (427)
T ss_pred             HHHHHHH-HcCc---ccHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence            5544444 2222   2222266777778888889999888776 5554

>PLN02955 8-amino-7-oxononanoate synthase

Probab=99.83  E-value=5.6e-18  Score=156.24  Aligned_cols=256  Identities=16%  Similarity=0.119  Sum_probs=171.3

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC--CCCC----CHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA--PTAG----LPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~--~~~g----~~~lr~~ia~~~~~~~~~~~~~~~i~~~~  107 (343)
                      .++.++|+..+   |.++..+|+++++..++++.--.+.-+  -..|    +.+|++.+|+|+        ..+..++.+
T Consensus       101 ~r~~l~FsSnd---YLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~--------g~e~all~s  169 (476)
T PLN02955        101 FKKLLLFSGND---YLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLK--------KKEDCLVCP  169 (476)
T ss_pred             CceEEEeeccC---ccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHH--------CCCcEEEEC
Confidence            45789999988   567889999999999988642111000  1123    378999999999        456777777


Q ss_pred             ChHHHHHHHHHHh--------------cCCCCeEEEeCCCCcchHHHHHhc----CceeEEeecCCCCCCCCCHHHHHhh
Q 019298          108 GCTQAIDVAMALL--------------SRPGANILLPRPGFPIYELSAAFR----HIEVRHFDLLPDKGWEVDLDDIESL  169 (343)
Q Consensus       108 g~~~al~~~~~~l--------------~~~gd~vl~~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~  169 (343)
                      ++..+...++.+|              ..++|.|++..-.|.+....++..    +.++..++.       -|++.|++.
T Consensus       170 SGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~H-------ND~~~Le~~  242 (476)
T PLN02955        170 TGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRH-------CDMYHLNSL  242 (476)
T ss_pred             ChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCC-------CCHHHHHHH
Confidence            7787777777776              245678889998998888888776    456665543       278888887


Q ss_pred             hcC---CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC-CCCCEEEEccCcc
Q 019298          170 ADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSK  245 (343)
Q Consensus       170 ~~~---~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK  245 (343)
                      ++.   +.+.|++....++.|.+.+   +.+|.++|++||+++|+||+|+.++++...-.....++ ..+..|+++||||
T Consensus       243 L~~~~~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsK  319 (476)
T PLN02955        243 LSSCKMKRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSK  319 (476)
T ss_pred             HHhCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCcc
Confidence            743   2334444444899999976   67777778899999999999998887753322222222 1346799999999


Q ss_pred             ccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc--cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHh
Q 019298          246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD--ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPS  321 (343)
Q Consensus       246 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~  321 (343)
                      +||+.|   ||+++++        ++++.++....  +++...++...++..+++.....-...++++.++.+++.+.
T Consensus       320 A~G~~G---Gfi~gs~--------~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~  386 (476)
T PLN02955        320 AAGCHG---GFIACSK--------KWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKAL  386 (476)
T ss_pred             chhccC---ceeecHH--------HHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence            998887   9988853        57777775532  23333333333321333321111112667777777777763

>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]

Probab=99.83  E-value=2.4e-18  Score=152.69  Aligned_cols=257  Identities=16%  Similarity=0.169  Sum_probs=183.4

Q ss_pred             CCCcHHHHHHHHHHHhcC-----CCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh--c
Q 019298           51 FHTTHVATEAVAEALLSE-----KFNGYAP--TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL--S  121 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~-----~~~~Y~~--~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l--~  121 (343)
                      .++.|++.++|...+...     ..+.|+-  ....++.|+.+|+.+      ++++++|++|+|++++.+++++..  .
T Consensus        11 Tp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~ll------ga~~~eIiFTSG~TEsnNlaI~g~~~a   84 (386)
T COG1104          11 TPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLL------GADPEEIIFTSGATESNNLAIKGAALA   84 (386)
T ss_pred             CCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHh------CCCCCeEEEecCCcHHHHHHHHhhHHh
Confidence            467899999998887642     1222221  123467888999998      678899999999999999999873  2


Q ss_pred             ----CCCCeEEEeCCCCcchHHHHHhc---CceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298          122 ----RPGANILLPRPGFPIYELSAAFR---HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (343)
Q Consensus       122 ----~~gd~vl~~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~  194 (343)
                          +.|.+|++..-.|+.....++.+   |.++.+++++.  +..+|+++|++++++++.+|.+...||-+|++   ++
T Consensus        85 ~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~--~G~v~~e~L~~al~~~T~LVSim~aNnE~G~I---Qp  159 (386)
T COG1104          85 YRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDS--NGLVDLEQLEEALRPDTILVSIMHANNETGTI---QP  159 (386)
T ss_pred             hhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCC--CCeEcHHHHHHhcCCCceEEEEEecccCeeec---cc
Confidence                25789999999999888877776   99999998875  45699999999999999999999999999999   77


Q ss_pred             HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (343)
Q Consensus       195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~  274 (343)
                      +++|.++|+++++++++|.++..    |+-+..+..+.   -.+...|-+|..|..|  +|.+...+...+.  | ++.-
T Consensus       160 I~ei~~i~k~~~i~fHvDAvQa~----Gkipi~~~~~~---vD~ls~SaHK~~GpkG--iGaLyv~~~~~~~--p-~i~G  227 (386)
T COG1104         160 IAEIGEICKERGILFHVDAVQAV----GKIPIDLEELG---VDLLSFSAHKFGGPKG--IGALYVRPGVRLE--P-LIHG  227 (386)
T ss_pred             HHHHHHHHHHcCCeEEEehhhhc----CceeccccccC---cceEEeehhhccCCCc--eEEEEECCCCccC--c-eecc
Confidence            89999999999999999999987    33333333322   2378889999999998  7887774322111  1 1111


Q ss_pred             HhhhhccccCcchHHHHHHHhccchhhHHHH-HHHHHHHHHHHHHHHhhcCC-CCcee
Q 019298          275 MKKYFDILGDPATFIQVCIMYGCLSTIMQIM-IHGNFLENFAGSCVPSYKLI-PELIN  330 (343)
Q Consensus       275 l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l-~~~~~~~~~~~~~~~~L~~~-~g~~~  330 (343)
                      -.......+++......+++..+++...+-+ +...++...|+.+.+.|... |++.+
T Consensus       228 GgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~  285 (386)
T COG1104         228 GGQERGLRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYL  285 (386)
T ss_pred             CcCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEE
Confidence            1111222222222233333244444323333 38888889999999999864 66554

>TIGR03246 arg_catab_astC succinylornithine transaminase family

Probab=99.82  E-value=5.2e-18  Score=157.17  Aligned_cols=268  Identities=16%  Similarity=0.082  Sum_probs=169.1

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  110 (343)
                      ++++++||..|.-+.+.++ .+|.+.+++++++++..  ...|.. ....+|.+.++++.        ..+.++++++++
T Consensus        33 dG~~ylD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~la~~L~~~~--------~~~~~~f~~SGs  102 (397)
T TIGR03246        33 QGKEYIDFAGGIAVNALGH-AHPELVKALIEQADKLWHIGNGYTN-EPVLRLAKKLVDAT--------FADKVFFCNSGA  102 (397)
T ss_pred             CCCEEEECCcCHhhccCCC-CCHHHHHHHHHHHHhcccccCccCC-HHHHHHHHHHHhhC--------CCCEEEEeCCcH
Confidence            3789999988753322333 68999999999987521  111221 12234555555443        246999999999


Q ss_pred             HHHHHHHHHhc-------C-CCCeEEEeCCCCcchHHHHHh-cCceeEE---eecCCC--CCCCCCHHHHHhhhcCCceE
Q 019298          111 QAIDVAMALLS-------R-PGANILLPRPGFPIYELSAAF-RHIEVRH---FDLLPD--KGWEVDLDDIESLADQNTVA  176 (343)
Q Consensus       111 ~al~~~~~~l~-------~-~gd~vl~~~p~~~~~~~~~~~-~g~~~~~---~~~~~~--~~~~~d~~~l~~~~~~~~~~  176 (343)
                      +++..+++...       + ..++|+..+-+|++....+.. .+.....   -+..+.  .-...|++.+++.+.+++.+
T Consensus       103 eA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aa  182 (397)
T TIGR03246       103 EANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKALISDKTCA  182 (397)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCCHHHHHHHhccCeEE
Confidence            99999999762       1 235677777777665433322 2211100   000000  00013789999988777777


Q ss_pred             EEEeCCCCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEE
Q 019298          177 LVIINPGNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG  255 (343)
Q Consensus       177 i~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G  255 (343)
                      +++..++++.|... +.+.+++|.++|++||+++|+||+|.++...+... ....++-...   +.++||.++ .|+++|
T Consensus       183 vi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~-a~~~~gv~pD---i~t~~K~lg-gG~pig  257 (397)
T TIGR03246       183 VIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPD---ILTSAKALG-GGFPIG  257 (397)
T ss_pred             EEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccch-hhhhcCCCCC---EEEeehhhh-CCccee
Confidence            77664466667554 88999999999999999999999998875554321 1111221112   237899986 789999


Q ss_pred             EEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCC
Q 019298          256 WFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLI  325 (343)
Q Consensus       256 ~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~  325 (343)
                      |+++++        ++.+.++... ..+++.++..++++ .+.|+.. +-.+..++++++.+.+.+.|+++
T Consensus       258 av~~~~--------~i~~~~~~~~~~~t~~~~p~~~aaa-~a~l~~~-~~~~l~~~~~~~~~~l~~~L~~l  318 (397)
T TIGR03246       258 AMLTTT--------EIAAHLKVGTHGTTYGGNPLACAVA-GKVLDLV-NTPELLAGVKQRHDLFVDGLEKI  318 (397)
T ss_pred             EEEEcH--------HHHHhccCCCcCCCCCCCHHHHHHH-HHHHHHH-hhccHHHHHHHHHHHHHHHHHHH
Confidence            999853        5777665442 23445677777776 5554421 11126778888888888877764

Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.

>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase

Probab=99.82  E-value=6.4e-18  Score=155.97  Aligned_cols=241  Identities=21%  Similarity=0.181  Sum_probs=165.2

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeCC
Q 019298           54 THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRP  132 (343)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~p  132 (343)
                      .+.-.+++.+++..+.   |.......+||++++++++        .++.++++|+++++..++.++ .++||+|+++.+
T Consensus         9 ~~~~~~~v~~~~~~~~---~~~g~~~~~le~~la~~~g--------~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~   77 (380)
T TIGR03588         9 DQDDIDAVVEVLKSDF---LTQGPTVPAFEEALAEYVG--------AKYAVAFNSATSALHIACLALGVGPGDRVWTTPI   77 (380)
T ss_pred             CHHHHHHHHHHHhcCC---ccCChhHHHHHHHHHHHHC--------CCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCc
Confidence            3555777777776543   3333457899999999994        245667778899999999998 789999999999


Q ss_pred             CCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc----CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcE
Q 019298          133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD----QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTL  208 (343)
Q Consensus       133 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~  208 (343)
                      +|..+...+...|++++.+++++ +++.+|++++++.++    ++++++++   .|++|..   .++++|.++|+++|++
T Consensus        78 ~~~~~~~~~~~~G~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~t~~v~~---~~~~G~~---~~~~~i~~l~~~~~~~  150 (380)
T TIGR03588        78 TFVATANCALYCGAKVDFVDIDP-DTGNIDEDALEKKLAAAKGKLPKAIVP---VDFAGKS---VDMQAIAALAKKHGLK  150 (380)
T ss_pred             chHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHHhhcccCCCceEEEE---eCCCCcc---CCHHHHHHHHHHcCCE
Confidence            99999888899999999999865 346799999999998    67787775   4568877   4578888999999999


Q ss_pred             EEEccCCCcc-ccCCCCCCcccccCCCCCEEEEccCc--cccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcccc--
Q 019298          209 VIADEVYGHL-VFGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG--  283 (343)
Q Consensus       209 ~i~D~ay~~~-~~~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~--  283 (343)
                      +|+|++++.. .+.+..   +....  .-.+.+.|++  |.++.+  ..|++++.+       +++.++++.......  
T Consensus       151 lI~D~a~a~g~~~~~~~---~g~~~--~~d~~~~S~~~~K~~~~~--~GG~v~~~~-------~~~~~~~~~~~~~g~~~  216 (380)
T TIGR03588       151 IIEDASHALGAEYGGKP---VGNCR--YADATVFSFHPVKIITTA--EGGAVTTND-------EELAERMRLLRSHGITK  216 (380)
T ss_pred             EEEECCCcccCccCCEe---CCCcc--ccceEEEecCCCCccccc--CceEEEECC-------HHHHHHHHHHHHCCCCC
Confidence            9999999864 233322   12200  1137777876  776442  457777754       456666654422100  


Q ss_pred             ------------------------CcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298          284 ------------------------DPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN  330 (343)
Q Consensus       284 ------------------------~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~  330 (343)
                                              ..+.+ ++++..+.|   ..+-+..++-+++.+.+.+.|..+|++..
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~g~n~~m~~l-~aa~g~~qL---~~l~~~~~~r~~~~~~~~~~L~~~~~~~~  283 (380)
T TIGR03588       217 DPLLFEKQDEGPWYYEQQELGFNYRMTDI-QAALGLSQL---KKLDRFVAKRREIAARYDRLLKDLPYFTP  283 (380)
T ss_pred             CcccccccccCcceeeeeccccccCccHH-HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhcCCCCccC
Confidence                                    01111 222111112   22333556667777788888888877663

This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)

Probab=99.82  E-value=9e-18  Score=153.51  Aligned_cols=238  Identities=19%  Similarity=0.123  Sum_probs=164.1

Q ss_pred             HHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeCCCCcch
Q 019298           59 EAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRPGFPIY  137 (343)
Q Consensus        59 ~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~p~~~~~  137 (343)
                      +++.+.+..+.   |.......++++.++++++        .+++++++|+++++..++..+ .++||+|+++.++|..+
T Consensus         3 ~~~~~~~~~~~---~~~~~~~~~~~~~la~~~~--------~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~   71 (352)
T cd00616           3 EAVEEVLDSGW---LTLGPKVREFEKAFAEYLG--------VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVAT   71 (352)
T ss_pred             HHHHHHHHcCC---ccCCHHHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHH
Confidence            45556655443   3333457899999999983        357888889999999999998 58999999999999999


Q ss_pred             HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCc
Q 019298          138 ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH  217 (343)
Q Consensus       138 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~  217 (343)
                      ...+...|.+++.+++++ +++.+|++.+++.+++++++++++   |++|...   ++++|.++|+++|+++|+|++|..
T Consensus        72 ~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~~---~~~~i~~l~~~~~i~li~D~a~~~  144 (352)
T cd00616          72 ANAILLLGATPVFVDIDP-DTYNIDPELIEAAITPRTKAIIPV---HLYGNPA---DMDAIMAIAKRHGLPVIEDAAQAL  144 (352)
T ss_pred             HHHHHHcCCeEEEEecCC-CcCCcCHHHHHHhcCcCCeEEEEE---CCCCCcC---CHHHHHHHHHHcCCeEEEECCCCC
Confidence            999999999999998854 357799999999988788888876   4689875   467778888899999999999985


Q ss_pred             cccCCCCCCcccccCCCCCEEEEccCc--cccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccc-------------
Q 019298          218 LVFGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDIL-------------  282 (343)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~-------------  282 (343)
                      .......  .+...    ..+.+.|++  |.+  ++.+.|++++.+       +++.++++......             
T Consensus       145 g~~~~~~--~~~~~----~d~~~~S~~~~K~~--~~~~gg~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (352)
T cd00616         145 GATYKGR--KVGTF----GDAGAFSFHPTKNL--TTGEGGAVVTND-------EELAERARLLRNHGRDRDRFKYEHEIL  209 (352)
T ss_pred             CCeECCE--EcccC----cceeEEcCCCCCCC--cccCceEEEECC-------HHHHHHHHHHHHcCCCCCCCcccccee
Confidence            3221110  11111    126677776  886  333468888753       35666665432110             


Q ss_pred             ---cCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298          283 ---GDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKS  333 (343)
Q Consensus       283 ---~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~  333 (343)
                         ...+.+...+. ...+   ..+-+..++.+++.+.+.+.|++++|+.+..+
T Consensus       210 ~~~~~~~~~~aa~~-~~~l---~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~  259 (352)
T cd00616         210 GYNYRLSEIQAAIG-LAQL---EKLDEIIARRREIAERYKELLADLPGIRLPDV  259 (352)
T ss_pred             eeccCcCHHHHHHH-HHHH---HhhHHHHHHHHHHHHHHHHHhcCCCCccCCCC
Confidence               11222222222 1111   22223667778888999999999888885443

AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein

>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.82  E-value=7e-18  Score=156.75  Aligned_cols=226  Identities=14%  Similarity=0.049  Sum_probs=158.4

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH----HhcCceeEEeec
Q 019298           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFDL  153 (343)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~~  153 (343)
                      -..+|++.+|++.+        .+..++++++++|+..++.+++++||+|+++...|......+    ...|.+++.++.
T Consensus        65 ~~~~le~~lA~l~g--------~~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~  136 (433)
T PRK08134         65 TVAVLEERVAALEG--------GVGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKP  136 (433)
T ss_pred             HHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECC
Confidence            46789999999983        345788999999999999999999999999999997654443    447888888865


Q ss_pred             CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (343)
Q Consensus       154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~  233 (343)
                      .       |++++++++++++++|++.+|+||+|.+.   ++++|+++|+++|+++|+|.+++.....    .++ .+  
T Consensus       137 ~-------d~~~l~~~i~~~TklV~~e~~~np~g~v~---Di~~I~~la~~~gi~livD~t~a~~~~~----~pl-~~--  199 (433)
T PRK08134        137 G-------DIDGWRAAIRPNTRLLFGETLGNPGLEVL---DIPTVAAIAHEAGVPLLVDSTFTTPYLL----RPF-EH--  199 (433)
T ss_pred             C-------CHHHHHHhcCCCCeEEEEECCCcccCccc---CHHHHHHHHHHcCCEEEEECCCcccccC----Cch-hc--
Confidence            2       78999999999999999999999999995   5788889999999999999998753221    111 12  


Q ss_pred             CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCch-------------------------HHHHHHh--hhhccccCcc
Q 019298          234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP-------------------------KVVERMK--KYFDILGDPA  286 (343)
Q Consensus       234 ~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~-------------------------~~~~~l~--~~~~~~~~~~  286 (343)
                       +-.+++.|.+|.++.+|..+|.+++......+.+.                         .+..+.+  .........+
T Consensus       200 -GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls  278 (433)
T PRK08134        200 -GADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGACLS  278 (433)
T ss_pred             -CCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHHHHhcCCCCC
Confidence             23499999999999999888887764322111000                         0011111  1122222344


Q ss_pred             hHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          287 TFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       287 ~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      +...+.+ ..-|   ..+-.+.++..++...+.+.|+.+|++. +..|
T Consensus       279 ~~~A~l~-~~gL---~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~yP  322 (433)
T PRK08134        279 PMNAWQL-LQGI---ETLPLRMERHVANTRKVVAFLASHPAVARVAHP  322 (433)
T ss_pred             HHHHHHH-hcCC---CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence            4433333 2222   2233377777888888888999887765 5444

>PRK07505 hypothetical protein; Provisional

Probab=99.81  E-value=1.1e-17  Score=155.49  Aligned_cols=253  Identities=15%  Similarity=0.148  Sum_probs=153.1

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCC-----CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-FNGYAP-----TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~-----~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~  107 (343)
                      ++..+||+...   +.++..+|++.+++.++++... .+....     .....++++.+++++      +.   +.++.+
T Consensus        45 g~~~ld~~s~~---~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~------~~---~~~~~~  112 (402)
T PRK07505         45 GHTFVNFVSCS---YLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELF------GA---SVLTFT  112 (402)
T ss_pred             CceEEEeecCC---ccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHh------CC---CEEEEC
Confidence            77889997753   2334678999999999987411 111111     122355666666665      22   444444


Q ss_pred             ChHHHHHHHHHHhc----CCCC-eEEEeCCCCcc-hHH--HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEE
Q 019298          108 GCTQAIDVAMALLS----RPGA-NILLPRPGFPI-YEL--SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVI  179 (343)
Q Consensus       108 g~~~al~~~~~~l~----~~gd-~vl~~~p~~~~-~~~--~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~  179 (343)
                      +++++...+++.+.    .+|+ .|++.+..|++ +..  .....+.+++.++.       .|++.+++.++++++++++
T Consensus       113 sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~~~~~~~vl  185 (402)
T PRK07505        113 SCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICKTNKTVAYV  185 (402)
T ss_pred             ChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHhcCCCEEEE
Confidence            55677777776543    2232 35566655533 211  11223455565543       3789999988777789999


Q ss_pred             eCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC-CcccccC--CCCCEEEEccCccccCCCCCcEEE
Q 019298          180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF-VPMGVFG--STVPILTLGSLSKRWIVPGWRLGW  256 (343)
Q Consensus       180 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~-~~~~~~~--~~~~~i~~~S~sK~~~~~G~r~G~  256 (343)
                      ++|+||||.+++   +++|.++|+++++++|+||+|+...++.... .....++  ..+++++++|+||+|+++|   ||
T Consensus       186 ~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---g~  259 (402)
T PRK07505        186 ADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG---GV  259 (402)
T ss_pred             EecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---eE
Confidence            999999999987   5777788889999999999996544432211 1111222  2357899999999999887   88


Q ss_pred             EEEeCCCCCCCchHHHHHHhhhhcc---ccCcchHHHHHHHhccch--hhHHHHHHHHHHHHHHHHHH
Q 019298          257 FVTTDPCGMFRKPKVVERMKKYFDI---LGDPATFIQVCIMYGCLS--TIMQIMIHGNFLENFAGSCV  319 (343)
Q Consensus       257 i~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~a~~~~~l~--~~~~~l~~~~~~~~~~~~~~  319 (343)
                      +++++       +++++.++.....   ..++++.+.+++ .+.+.  ......+.++.++++...+.
T Consensus       260 ~~~~~-------~~~~~~~~~~~~~~t~~~~~~~~a~aa~-~a~l~~~~~~~~~~~~~~l~~~~~~~~  319 (402)
T PRK07505        260 IMLGD-------AEQIELILRYAGPLAFSQSLNVAALGAI-LASAEIHLSEELDQLQQKLQNNIALFD  319 (402)
T ss_pred             EEeCC-------HHHHHHHHHhCCCceeCCCCCHHHHHHH-HHHHHHHhccCcHHHHHHHHHHHHHHH
Confidence            77643       4677777665331   124455555555 44433  11112224455555554443

>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.81  E-value=7.5e-18  Score=156.39  Aligned_cols=227  Identities=16%  Similarity=0.059  Sum_probs=157.2

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH----HHhcCceeEEeec
Q 019298           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFDL  153 (343)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~~  153 (343)
                      ....|++.++++.+        .+..+++++++.|+..++.+++++||+|++....|......    +...|.+++.++ 
T Consensus        70 ~~~~Le~~lA~l~g--------~~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-  140 (436)
T PRK07812         70 TQDVVEQRIAALEG--------GVAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-  140 (436)
T ss_pred             hHHHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-
Confidence            45688899988873        45678888889999999999999999999999888775543    333576666663 


Q ss_pred             CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (343)
Q Consensus       154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~  233 (343)
                      +.     .|++++++++++++++|++.+|+||+|.+   .++++|.++|+++|+++|+|++++....    ..++ .+  
T Consensus       141 d~-----~d~e~l~~ai~~~tklV~ie~~sNp~G~v---~Dl~~I~~la~~~gi~liVD~t~a~~~~----~~pl-~~--  205 (436)
T PRK07812        141 DP-----DDLDAWRAAVRPNTKAFFAETISNPQIDV---LDIPGVAEVAHEAGVPLIVDNTIATPYL----IRPL-EH--  205 (436)
T ss_pred             CC-----CCHHHHHHhCCCCCeEEEEECCCCCCCee---cCHHHHHHHHHHcCCEEEEECCCccccc----CCch-hc--
Confidence            11     27999999998889999999999999999   4577888889999999999999875221    1111 11  


Q ss_pred             CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCC-----------------------chHHHHHHh--hhhccccCcchH
Q 019298          234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR-----------------------KPKVVERMK--KYFDILGDPATF  288 (343)
Q Consensus       234 ~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~-----------------------~~~~~~~l~--~~~~~~~~~~~~  288 (343)
                       +-.+++.|++|.++..|--+|++++.+....+.                       ++++..+.+  .........++.
T Consensus       206 -GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~  284 (436)
T PRK07812        206 -GADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPF  284 (436)
T ss_pred             -CCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHH
Confidence             233888999999999988888877753321110                       011111111  112223445555


Q ss_pred             HHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          289 IQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       289 ~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      ..+.+ ..-|   ..+-.+.++..++...+.+.|+++|++. ++.|
T Consensus       285 ~a~l~-~rgl---~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yP  326 (436)
T PRK07812        285 NAFLI-AQGL---ETLSLRIERHVANAQRVAEFLEARDEVASVNYA  326 (436)
T ss_pred             HHHHH-hcCc---CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence            44443 1221   2233377888889999999999998876 5555

>PLN00144 acetylornithine transaminase

Probab=99.80  E-value=8.9e-18  Score=154.52  Aligned_cols=282  Identities=16%  Similarity=0.099  Sum_probs=173.2

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++.++|+..|.-..  .++ .+|++.+++++++.....  +.. ....+....+++.+.+..    ..+.+++++++++
T Consensus        13 dG~~ylD~~~g~~~~--~lGh~~p~v~~ai~~q~~~~~~--~~~-~~~~~~~~~la~~l~~~~----~~~~v~f~~sGse   83 (382)
T PLN00144         13 EGKEYLDMAAGIAVN--ALGHGDPDWVKAVAEQAGTLAH--VSN-VYHTIPQVELAKRLVASS----FADRVFFCNSGTE   83 (382)
T ss_pred             CCCEEEECCcCHHhc--cCCCCCHHHHHHHHHHHHhcCC--ccc-cccCHHHHHHHHHHHhcC----CCCeEEEeCCcHH
Confidence            388999998875321  233 689999999999875321  111 112334455555554321    3469999999999


Q ss_pred             HHHHHHHHhc---C------C------CCeEEEeCCCCcchHHHHHhcCceeE----EeecCCCCC--CCCCHHHHHhhh
Q 019298          112 AIDVAMALLS---R------P------GANILLPRPGFPIYELSAAFRHIEVR----HFDLLPDKG--WEVDLDDIESLA  170 (343)
Q Consensus       112 al~~~~~~l~---~------~------gd~vl~~~p~~~~~~~~~~~~g~~~~----~~~~~~~~~--~~~d~~~l~~~~  170 (343)
                      +++.+++...   .      +      ..+|+...-+|++....+........    ..+..+...  .--|++.+++.+
T Consensus        84 A~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~  163 (382)
T PLN00144         84 ANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLI  163 (382)
T ss_pred             HHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhc
Confidence            9999988753   1      0      25788889899876655444322110    001000000  012688999887


Q ss_pred             cCCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCC-cccccCCCCCEEEEccCcccc
Q 019298          171 DQNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSKRW  247 (343)
Q Consensus       171 ~~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~-~~~~~~~~~~~i~~~S~sK~~  247 (343)
                      ..+..+.++..| +||.|.. .+.+.+++|.++|++||+++|+||+|.++...+.... ....+.++     +.||||.+
T Consensus       164 ~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD-----i~t~sK~l  238 (382)
T PLN00144        164 QKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD-----IMTLAKPL  238 (382)
T ss_pred             CCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC-----EEEecccc
Confidence            644344445555 7885543 2455699999999999999999999999876654221 12223332     67889996


Q ss_pred             CCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHH---HHHHHHHHHHHHHHh--
Q 019298          248 IVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMI---HGNFLENFAGSCVPS--  321 (343)
Q Consensus       248 ~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~---~~~~~~~~~~~~~~~--  321 (343)
                       .+|+|+||++++.        ++.+.+... ...++..+++.++++ .+.|    ++++   ..+++++.++.+.+.  
T Consensus       239 -~~G~pig~v~~~~--------~~~~~~~~~~~~~T~~~~pl~~aaa-~a~l----~~i~~~~~~~~~~~~g~~l~~~l~  304 (382)
T PLN00144        239 -AGGLPIGAVLVTE--------KVASAINPGDHGSTFAGGPLVCNAA-LAVL----DKISKPGFLASVAKKGEYLRELLR  304 (382)
T ss_pred             -cCCcceEEEEEcH--------HHHhccCCCCCCCCCCCCHHHHHHH-HHHH----HHHhhchHHHHHHHHHHHHHHHHH
Confidence             5789999999963        566666533 233567788888777 4333    2322   444444444444443  


Q ss_pred             --hcCCCCceeeCCCCceEeeecC
Q 019298          322 --YKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       322 --L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                        +.+.|.+.-... .|+++|+.|
T Consensus       305 ~~~~~~~~~~~vrg-~G~~~~l~l  327 (382)
T PLN00144        305 RKLGGNPHVKEVRG-VGLLVGIQL  327 (382)
T ss_pred             HHHhhCCCceeeec-CceEEEEEe
Confidence              344444332122 899999864

>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=99.80  E-value=3.1e-17  Score=146.89  Aligned_cols=193  Identities=23%  Similarity=0.261  Sum_probs=150.3

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeC
Q 019298           53 TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPR  131 (343)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~  131 (343)
                      ..+...+++.+.++.+.+.. ++  -..+|++++++|+        ...+.+.+++++.|+.+++++| .+|||.|+++.
T Consensus        13 i~~~e~~~v~~vl~sg~i~~-G~--~v~~FE~~~ae~~--------G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps   81 (374)
T COG0399          13 IGEEELAAVQEVLKSGWLTG-GP--FVRRFEQAFAEYL--------GVKYAVAVSSGTAALHLALLALAIGPGDEVIVPS   81 (374)
T ss_pred             cchHHHHHHHHHHHcCCeec-Ch--HHHHHHHHHHHHh--------CCCeEEEecChHHHHHHHHHhcCCCCCCEEEecC
Confidence            34677888888888765533 33  4689999999999        5789999999999999999976 48999999999


Q ss_pred             CCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEE
Q 019298          132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA  211 (343)
Q Consensus       132 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~  211 (343)
                      -+|......+...|++.+++++++ +.+.+|.+.+|+++++++++|+..+   -.|..   -++++|.++|++||++||+
T Consensus        82 ~TfvATan~i~~~Ga~PVFvDid~-~T~nid~~~ie~aIt~~tKAIipVh---l~G~~---~dm~~i~~la~~~~l~vIE  154 (374)
T COG0399          82 FTFVATANAVLLVGAKPVFVDIDP-DTLNIDPDLIEAAITPRTKAIIPVH---LAGQP---CDMDAIMALAKRHGLPVIE  154 (374)
T ss_pred             CchHHHHHHHHHcCCeEEEEecCC-cccCCCHHHHHHHcccCCeEEEEeh---hccCC---CCHHHHHHHHHHcCCeEEE
Confidence            999999999999999999999987 4678999999999999999998443   44555   3677888888899999999


Q ss_pred             ccCCCcc-ccCCCCCCcccccCCCCCEEEEccC--ccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh
Q 019298          212 DEVYGHL-VFGDKPFVPMGVFGSTVPILTLGSL--SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF  279 (343)
Q Consensus       212 D~ay~~~-~~~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~  279 (343)
                      |.+++.. .|.++...++   ++    +.+.||  +|.+...  -.|.+++.|       +++.++++.++
T Consensus       155 DaAqa~Ga~y~gk~vGt~---Gd----~~~fSF~~~K~ittg--EGGav~tnd-------~ela~k~~~lr  209 (374)
T COG0399         155 DAAQAHGATYKGKKVGSF---GD----IGAFSFHATKNLTTG--EGGAVVTND-------EELAEKARSLR  209 (374)
T ss_pred             EcchhccCeecCcccccc---cc----eEEEEecCCCCcccc--CceEEEeCC-------HHHHHHHHHHH
Confidence            9999964 4445543333   32    556666  4664433  456676653       57888887764

>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

Probab=99.80  E-value=4.2e-18  Score=138.77  Aligned_cols=165  Identities=15%  Similarity=0.077  Sum_probs=129.3

Q ss_pred             HHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchH-HHHHhcCceeEEeecCCCCC
Q 019298           80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE-LSAAFRHIEVRHFDLLPDKG  158 (343)
Q Consensus        80 ~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~-~~~~~~g~~~~~~~~~~~~~  158 (343)
                      .++++.+++++.      .+.+++++++|+++++..+++++.+++++|++++++|.+.. ..+...|.++..++.+....
T Consensus         3 ~~~~~~l~~~~~------~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~   76 (170)
T cd01494           3 EELEEKLARLLQ------PGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGY   76 (170)
T ss_pred             HHHHHHHHHHcC------CCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCc
Confidence            578899999983      46789999999999999999999888999999999998888 78888899999888765433


Q ss_pred             CCCCHHHHHhhh-cCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCE
Q 019298          159 WEVDLDDIESLA-DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI  237 (343)
Q Consensus       159 ~~~d~~~l~~~~-~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~  237 (343)
                      ...+.+.+++.. ..+++.+++++++||+|...+.   ++|.++|+++|+++|+|++|..+......    ......+..
T Consensus        77 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~---~~l~~~~~~~~~~li~D~a~~~~~~~~~~----~~~~~~~~d  149 (170)
T cd01494          77 GGLDVAILEELKAKPNVALIVITPNTTSGGVLVPL---KEIRKIAKEYGILLLVDAASAGGASPAPG----VLIPEGGAD  149 (170)
T ss_pred             cchhhhhhhhccccCceEEEEEecCcCCCCeEcCH---HHHHHHHHHcCCEEEEecccccccccccc----cccccccCC
Confidence            333333555443 4578888999999999999765   77778888999999999999987655322    011122345


Q ss_pred             EEEccCccccCCCCCcEEEEEE
Q 019298          238 LTLGSLSKRWIVPGWRLGWFVT  259 (343)
Q Consensus       238 i~~~S~sK~~~~~G~r~G~i~~  259 (343)
                      +++.|++|.|+.  .++|++++
T Consensus       150 ~~~~s~~K~~~~--~~~G~l~~  169 (170)
T cd01494         150 VVTFSLHKNLGG--EGGGVVIV  169 (170)
T ss_pred             EEEEEcccccCC--CceEEEEe
Confidence            889999999876  66999876

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis

>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase

Probab=99.80  E-value=2.5e-17  Score=150.07  Aligned_cols=262  Identities=14%  Similarity=0.068  Sum_probs=175.4

Q ss_pred             HHHHHH-HHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCC
Q 019298           55 HVATEA-VAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPG  133 (343)
Q Consensus        55 ~~~~~~-~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~  133 (343)
                      .++.++ +..+...+.  .|..+.....|++++++++        ..++++.+++++.|++.++..+++|||.|  +.++
T Consensus        50 ~aMs~~q~a~~~~GDe--~yag~~s~~~lE~~va~~~--------G~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~  117 (450)
T TIGR02618        50 NAMSDKQWAGLMMGDE--AYAGSRNFYHLERTVRELY--------GFKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNM  117 (450)
T ss_pred             HHHHHHHHHHhhhcch--hhcCCCcHHHHHHHHHHHH--------CCCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCce
Confidence            666666 666655443  4887778899999999999        45789999999999998877778999987  6677


Q ss_pred             CcchHHH-HHhcCceeEEeecC--------CCCCCCCCHHHHHhhhcC----CceEEEEeCCCCC-cccccCHHHHHHHH
Q 019298          134 FPIYELS-AAFRHIEVRHFDLL--------PDKGWEVDLDDIESLADQ----NTVALVIINPGNP-CGNVYSYQHLQKLA  199 (343)
Q Consensus       134 ~~~~~~~-~~~~g~~~~~~~~~--------~~~~~~~d~~~l~~~~~~----~~~~i~~~~p~np-tG~~~~~~~l~~l~  199 (343)
                      |...... ....|..++.+..+        ....+.+|++++++++++    +++++++.+++|. .|+++|.++++++.
T Consensus       118 ~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~  197 (450)
T TIGR02618       118 YFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVR  197 (450)
T ss_pred             eHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHH
Confidence            7444443 67778755555333        134577999999999975    3446788888875 58999999999999


Q ss_pred             HHHhhcCcEEEEccCCCc-c-cc-----CCCCCCcc----cccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCc
Q 019298          200 ETANKLKTLVIADEVYGH-L-VF-----GDKPFVPM----GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK  268 (343)
Q Consensus       200 ~~~~~~~~~~i~D~ay~~-~-~~-----~~~~~~~~----~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~  268 (343)
                      ++|++||+.+|+|.+... . .+     .+..-.++    ..+-.. -..+..|..|.++.+-  -|++++.+       
T Consensus       198 elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~-aD~~~~S~~Kd~~~~~--GG~l~~~d-------  267 (450)
T TIGR02618       198 ELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSY-ADGCTMSGKKDCLVNI--GGFLCMND-------  267 (450)
T ss_pred             HHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhcc-CcEEEEeeccCCCCCC--ceEEEeCC-------
Confidence            999999999999999876 1 11     01111111    111111 1258899999977762  15555443       


Q ss_pred             hHHHHHHhhhhccc------cCcchHHHHHHHhccchhhHHHHH--HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEee
Q 019298          269 PKVVERMKKYFDIL------GDPATFIQVCIMYGCLSTIMQIMI--HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKY  340 (343)
Q Consensus       269 ~~~~~~l~~~~~~~------~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~  340 (343)
                      +++.++++...-..      +....-...++..+ |   .+.++  ...+-....++|.+.|.+. |+++..|.+|+-+|
T Consensus       268 ~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~g-L---~e~~~~~y~~~r~~~a~~La~~L~~~-Gvpv~~p~ggh~V~  342 (450)
T TIGR02618       268 DEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIG-I---REAVDYEYIEHRVKQVRYLGDKLKAA-GVPIVEPVGGHAVF  342 (450)
T ss_pred             HHHHHHHHHHhhhcCCccccCchhhhhHHHHHHH-H---HHhhhHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCcceEE
Confidence            57888887763211      11122122222112 2   23333  2233333467778888888 89988899999999


Q ss_pred             ecC
Q 019298          341 LDL  343 (343)
Q Consensus       341 ~~l  343 (343)
                      ++.
T Consensus       343 vda  345 (450)
T TIGR02618       343 LDA  345 (450)
T ss_pred             EEh
Confidence            863

This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)

>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions

Probab=99.80  E-value=2.5e-17  Score=150.85  Aligned_cols=238  Identities=22%  Similarity=0.254  Sum_probs=163.8

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeCCC
Q 019298           55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRPG  133 (343)
Q Consensus        55 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~p~  133 (343)
                      ++.++++.+.++.+.+..+++  -..+|++++++++        +.++++.+++++.||.+++.++ +++||+|+++.-+
T Consensus         5 ~e~~~~v~~~l~s~~~~~~g~--~~~~fE~~~a~~~--------g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t   74 (363)
T PF01041_consen    5 EEEIDAVLEVLRSGWLSTYGP--YVEEFEKEFAEYF--------GVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYT   74 (363)
T ss_dssp             HHHHHHHHHHHHHTCCSSSSH--HHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS
T ss_pred             HHHHHHHHHHHHhCCccCCCH--HHHHHHHHHHHHh--------CCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCc
Confidence            556777788887765544433  4689999999999        4689999999999999999998 4789999999999


Q ss_pred             CcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEcc
Q 019298          134 FPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE  213 (343)
Q Consensus       134 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~  213 (343)
                      |......+...|++++.+++++ +++.+|++.+++.+++++++|++.+.   .|..   .++.+|.++|+++|+++|+|.
T Consensus        75 ~~~~~~ai~~~G~~pv~~Di~~-~~~~id~~~~~~~i~~~t~ai~~~h~---~G~~---~d~~~i~~~~~~~~i~lIeD~  147 (363)
T PF01041_consen   75 FPATASAILWAGAEPVFVDIDP-ETLNIDPEALEKAITPKTKAILVVHL---FGNP---ADMDAIRAIARKHGIPLIEDA  147 (363)
T ss_dssp             -THHHHHHHHTT-EEEEE-BET-TTSSB-HHHHHHHHHTTEEEEEEE-G---GGB------HHHHHHHHHHTT-EEEEE-
T ss_pred             chHHHHHHHHhccEEEEEeccC-CcCCcCHHHHHHHhccCccEEEEecC---CCCc---ccHHHHHHHHHHcCCcEEEcc
Confidence            9999999999999999999986 56789999999999999999986654   4444   478999999999999999999


Q ss_pred             CCCcccc-CCCCCCcccccCCCCCEEEEccC--ccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccc--------
Q 019298          214 VYGHLVF-GDKPFVPMGVFGSTVPILTLGSL--SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDIL--------  282 (343)
Q Consensus       214 ay~~~~~-~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~--------  282 (343)
                      +++.... .+..   +..+++    +.+.||  +|.+..  -..|.+++.+       +++.++++.++...        
T Consensus       148 a~a~g~~~~g~~---~G~~gd----~~~fSf~~~K~i~~--geGG~v~~~~-------~~~~~~~~~~~~~g~~~~~~~~  211 (363)
T PF01041_consen  148 AQAFGARYKGRP---VGSFGD----IAIFSFHPTKIITT--GEGGAVVTND-------PELAERARALRNHGRSRDAFRR  211 (363)
T ss_dssp             TTTTT-EETTEE---TTSSSS----EEEEESSTTSSS-S--SS-EEEEEST-------HHHHHHHHHHTBTTEETSECST
T ss_pred             ccccCceeCCEe---ccCCCC----ceEecCCCCCCCcC--CCCeeEEecH-------HHHHHHhhhhhccCcCcccccc
Confidence            9997432 3322   222332    777787  577532  2347787754       56888887664311        


Q ss_pred             ----------cCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce
Q 019298          283 ----------GDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI  329 (343)
Q Consensus       283 ----------~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~  329 (343)
                                ...+.+ ++++...-|..   +-+..++-+++.+.+.+.|..++++.
T Consensus       212 ~~~~~~~g~n~rm~~~-~AAigl~QL~~---L~~~~~~R~~~a~~y~~~L~~~~~~~  264 (363)
T PF01041_consen  212 YRHELPPGYNFRMSEL-QAAIGLAQLKR---LDEIIARRRENAQRYREALAGIPGIK  264 (363)
T ss_dssp             TEESSSS--B-B-BHH-HHHHHHHHHHT---HHHHHHHHHHHHHHHHHHHTTGTTEE
T ss_pred             ccccccCCcccccHHH-HHHHHHHHHHH---hhhhHHHHHHHHHHHHHHHhcCCCcc
Confidence                      112222 33332333322   22244555566777788888887775

The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....

>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional

Probab=99.79  E-value=2.4e-16  Score=146.97  Aligned_cols=207  Identities=17%  Similarity=0.196  Sum_probs=145.5

Q ss_pred             eEeccCCCCCCCCC-CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHH
Q 019298           38 ISLAMGDPTVHSCF-HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA  116 (343)
Q Consensus        38 i~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~  116 (343)
                      ..|++|.|...... ..++.-.+++.+.+..... .+++  ...+|+++++++++        .+++++++|+++++..+
T Consensus        26 ~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~~~-~~G~--~~~~fe~~lA~~~g--------~~~~v~~~sGt~al~~a   94 (438)
T PRK15407         26 KPFVPGKSPIPPSGKVIDAKELQNLVDASLDFWL-TTGR--FNDAFEKKLAEFLG--------VRYALLVNSGSSANLLA   94 (438)
T ss_pred             ccccCCCCCCCcCccCCCHHHHHHHHHHHHhCcc-cCCh--hHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHH
Confidence            44788887532111 1223333434444433221 2332  35789999999993        35799999999999998


Q ss_pred             HHHh---------cCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcc
Q 019298          117 MALL---------SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG  187 (343)
Q Consensus       117 ~~~l---------~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG  187 (343)
                      +.++         +++||+|+++.++|..+...+...|++++.+++++ ..+.+|++.+++.+++++++|+++++   +|
T Consensus        95 L~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~-~~~~id~~~le~~i~~~tkaVi~~~~---~G  170 (438)
T PRK15407         95 FSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVEL-PTYNIDASLLEAAVSPKTKAIMIAHT---LG  170 (438)
T ss_pred             HHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHHcCcCCeEEEEeCC---CC
Confidence            8876         37899999999999999999999999999998865 45789999999999888999988775   44


Q ss_pred             cccCHHHHHHHHHHHhhcCcEEEEccCCCccc-cCCCCCCcccccCCCCCEEEEccCc--cccCCCCCcEEEEEEeCCCC
Q 019298          188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCG  264 (343)
Q Consensus       188 ~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~-~~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~i~~~~~~~  264 (343)
                      ..   .++++|.++|+++|+++|+|++|+... +.+..   ..++.+    +.+.||+  |.+. .|. .|++++.+   
T Consensus       171 ~p---~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~---~G~~gd----~~~fSf~~~k~~~-~ge-GG~l~t~d---  235 (438)
T PRK15407        171 NP---FDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRM---TGTFGD----IATLSFYPAHHIT-MGE-GGAVFTND---  235 (438)
T ss_pred             Ch---hhHHHHHHHHHHCCCEEEEECccchhhhcCCee---eeccCc----eEEEeCCCCCCcc-ccC-ceEEEECC---
Confidence            43   468899999999999999999998743 23332   222332    5666765  5443 344 48888864   


Q ss_pred             CCCchHHHHHHhhh
Q 019298          265 MFRKPKVVERMKKY  278 (343)
Q Consensus       265 ~~~~~~~~~~l~~~  278 (343)
                          +++.++++..
T Consensus       236 ----~~l~~~~~~~  245 (438)
T PRK15407        236 ----PLLKKIIESF  245 (438)
T ss_pred             ----HHHHHHHHHH
Confidence                4566655544

>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]

Probab=99.79  E-value=1.1e-17  Score=145.43  Aligned_cols=267  Identities=16%  Similarity=0.136  Sum_probs=183.3

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEe
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP  130 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~  130 (343)
                      .++.|+++++|..+-. .....|+..+-...+.+.+++.+        ..+.+++++++|.+..+++.++++||+.|++.
T Consensus        10 ~g~~~~m~eam~~a~~-~~~~~YG~D~~~~~~e~~~ae~~--------g~~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~   80 (342)
T COG2008          10 AGPTPEMREALAAANA-VGDDVYGEDPTTNALEQRIAELF--------GKEAALFVPSGTQANQLALAAHCQPGESVICH   80 (342)
T ss_pred             CCCCHHHHHHHHhccc-cCCCCCCCCHHHHHHHHHHHHHh--------CCceEEEecCccHHHHHHHHHhcCCCCeEEEe
Confidence            5688999999988753 23346887766677777777777        23899999999999999999999999999999


Q ss_pred             CCCCcchHH--HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCCCcccccCHHHHHHHHHHH
Q 019298          131 RPGFPIYEL--SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETA  202 (343)
Q Consensus       131 ~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~  202 (343)
                      .-.|.....  .....+ ....++..+..+..+++|+++..++.      .++++++.+.+|-.|.++|.+++++|.++|
T Consensus        81 ~~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~  159 (342)
T COG2008          81 ETAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVC  159 (342)
T ss_pred             ccccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHH
Confidence            888843221  122222 22334444556678999999997752      456777777777899999999999999999


Q ss_pred             hhcCcEEEEccCCCcc--ccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc
Q 019298          203 NKLKTLVIADEVYGHL--VFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD  280 (343)
Q Consensus       203 ~~~~~~~i~D~ay~~~--~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~  280 (343)
                      +++|+.+..|.+--..  +..+.   +...+-.... .+..++||..+.+   +|.+++.|       .+++++++..+.
T Consensus       160 k~~~l~LHmDGAR~~nA~valg~---~~~~~~~~~D-~v~~~~tK~g~~~---~gAiv~gn-------~~~~~~a~~~rK  225 (342)
T COG2008         160 KEHGLPLHMDGARLANALVALGV---ALKTIKSYVD-SVSFCLTKGGGAP---VGAIVFGN-------RDFAKRARRWRK  225 (342)
T ss_pred             HHhCCceeechHHHHHHHHHcCC---CHHHHHhhCC-EEEEecccCCcce---eeeEEEcC-------HHHHHHHHHHHH
Confidence            9999999999885432  21222   2222222112 5666799996555   58888865       568887766643


Q ss_pred             cc---cCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          281 IL---GDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       281 ~~---~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ..   .+-..+..++. ..+|++ .-|...-.+-.+....+.+.|+..||+++..|..++.+|+++
T Consensus       226 ~~Ggl~~k~r~laA~~-~~~l~~-~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l  289 (342)
T COG2008         226 RAGGLMRKARFLAAQG-LYALED-DVWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRL  289 (342)
T ss_pred             HhcccHhhhhHHHHHH-HHHHhc-cHHHHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEEC
Confidence            21   12223333333 333333 224444444555588888999988899977778888888764

>PRK09792 4-aminobutyrate transaminase; Provisional

Probab=99.78  E-value=4.9e-17  Score=151.42  Aligned_cols=287  Identities=16%  Similarity=0.113  Sum_probs=172.8

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      +++.++|+..|.-.... --.+|.+.+++++++.......+..  ...+....+++.+..... ....+.+++++++++|
T Consensus        38 dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~~~f~~sGseA  113 (421)
T PRK09792         38 EGNEYIDFAAGIAVLNT-GHRHPDLVAAVEQQLQQFTHTAYQI--VPYESYVTLAEKINALAP-VSGQAKTAFFTTGAEA  113 (421)
T ss_pred             CCCEEEEccCchhhhcC-CCCCHHHHHHHHHHHHhccCcccCc--cCCHHHHHHHHHHHHhCC-CCCCceEEEeCChHHH
Confidence            38889999877633211 2268999999999987532212211  122333444444433211 0123688999999999


Q ss_pred             HHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhc-Cc-------------eeEEeecCCCCCCCC----CHHHHHhhhcC
Q 019298          113 IDVAMALLSR--PGANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDKGWEV----DLDDIESLADQ  172 (343)
Q Consensus       113 l~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~----d~~~l~~~~~~  172 (343)
                      ++.+++....  ...+|+....+|++....+... +.             .+..++...+. ..+    +++.+++.+..
T Consensus       114 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~~~~~~  192 (421)
T PRK09792        114 VENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIERLFKS  192 (421)
T ss_pred             HHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHHHHHHh
Confidence            9999887642  2357888888887764433322 21             11222221111 112    24677777652


Q ss_pred             ----CceEEEEeCC-CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccc
Q 019298          173 ----NTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKR  246 (343)
Q Consensus       173 ----~~~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~  246 (343)
                          +..+.++..| ++++|..+ +.+.+++|.++|++||+++|+||++.++.+.+.. .....++..+.   +.+|+|.
T Consensus       193 ~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~-~a~~~~~~~pD---i~t~gK~  268 (421)
T PRK09792        193 DIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKL-FAMDHYADKPD---LMTMAKS  268 (421)
T ss_pred             ccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCch-hHHHhcCCCCc---EEEeehh
Confidence                2334444555 89999875 8999999999999999999999999998776543 23333322222   5688999


Q ss_pred             cCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhh--HHHHHHHHHHHHHHHHHHHhhc
Q 019298          247 WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTI--MQIMIHGNFLENFAGSCVPSYK  323 (343)
Q Consensus       247 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~--~~~l~~~~~~~~~~~~~~~~L~  323 (343)
                      ++ +|+++||++++.        ++.+.+.... ..++..++++++++ .+.++-.  ..   ..+++++..+.+.+.|+
T Consensus       269 l~-~G~pigav~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa-~a~l~~l~~~~---~~~~~~~~g~~l~~~l~  335 (421)
T PRK09792        269 LA-GGMPLSGVVGNA--------NIMDAPAPGGLGGTYAGNPLAVAAA-HAVLNIIDKES---LCERANQLGQRLKNTLI  335 (421)
T ss_pred             hc-CCCceEEEEEcH--------HHHhccCCCCcCCCCCCCHHHHHHH-HHHHHHHHhhh---HHHHHHHHHHHHHHHHH
Confidence            76 789999999853        5666654332 23567788888866 4443211  12   33333333333333333


Q ss_pred             ----CCCCceeeCCCC-ceEeeecC
Q 019298          324 ----LIPELINFKSTG-SSLKYLDL  343 (343)
Q Consensus       324 ----~~~g~~~~~~~~-g~~~~~~l  343 (343)
                          ++|.  +..+.| |+++|+.|
T Consensus       336 ~l~~~~p~--v~~vrG~Gl~~~ie~  358 (421)
T PRK09792        336 DAKESVPA--IAAVRGLGSMIAAEF  358 (421)
T ss_pred             HHHHhCCC--cceecccceEEEEEe
Confidence                2442  335677 99999864

>PRK04366 glycine dehydrogenase subunit 2; Validated

Probab=99.78  E-value=9.6e-17  Score=151.76  Aligned_cols=205  Identities=17%  Similarity=0.174  Sum_probs=149.7

Q ss_pred             eccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC---CCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHH
Q 019298           40 LAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGY---APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA  116 (343)
Q Consensus        40 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y---~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~  116 (343)
                      ++.|.++    +..+|.+.+++.+.......+.|   ...+|..+++.++.+++.+.+|.  +...+..++|+.+.+..+
T Consensus        73 ~g~G~~~----~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~--~~~~l~~~~GA~a~~~~l  146 (481)
T PRK04366         73 YPLGSCT----MKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGM--DAVTLQPAAGAHGELTGL  146 (481)
T ss_pred             ecCcccC----CCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCC--CceEEEeCcHHHHHHHHH
Confidence            5666644    56778888888775222244567   34568889999999999887775  334555556666555433


Q ss_pred             --HH-HhcCCCC----eEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccc
Q 019298          117 --MA-LLSRPGA----NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV  189 (343)
Q Consensus       117 --~~-~l~~~gd----~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~  189 (343)
                        ++ .+.++||    +|++++|+|+.+...+...|.+++.++++  .++.+|+++|++.++++++++++++|+ |||..
T Consensus       147 ~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~--~~~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~~  223 (481)
T PRK04366        147 LMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSN--EDGLVDLEALKAAVGEDTAALMLTNPN-TLGLF  223 (481)
T ss_pred             HHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecC--CCCCcCHHHHHhhcccCCeEEEEeCCC-Ccccc
Confidence              22 3456666    99999999999999999999999999874  346799999999998889999999988 99964


Q ss_pred             cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCC----CCcEEEEEEeC
Q 019298          190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP----GWRLGWFVTTD  261 (343)
Q Consensus       190 ~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~----G~r~G~i~~~~  261 (343)
                        .+++++|+++|+++|+++++|.++.....+-.   ....+   +-.++++|.+|.|+.|    |..+|++.+++
T Consensus       224 --~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~---~~~~~---GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~  291 (481)
T PRK04366        224 --ERNILEIAEIVHEAGGLLYYDGANLNAILGKA---RPGDM---GFDVVHLNLHKTFSTPHGGGGPGSGPVGVKE  291 (481)
T ss_pred             --chHHHHHHHHHHHcCCEEEEEecChhhhcccC---Ccccc---CCCEEEEechhhcCCCCCCCCCCeeeeeehh
Confidence              35799999999999999999999863211111   11222   2348999999998754    45688887753

>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.78  E-value=6.7e-17  Score=147.31  Aligned_cols=220  Identities=18%  Similarity=0.194  Sum_probs=157.8

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh----cCceeEEeecC
Q 019298           79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----RHIEVRHFDLL  154 (343)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~----~g~~~~~~~~~  154 (343)
                      ...|++.++++-        ..+.++++++++.|+..++.+++++||+|+++...|.+....++.    .|.++..++. 
T Consensus        57 ~~~le~~la~Le--------~g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~-  127 (386)
T PF01053_consen   57 VRALEQRLAALE--------GGEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP-  127 (386)
T ss_dssp             HHHHHHHHHHHH--------T-SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST-
T ss_pred             HHHHHHHHHHhh--------cccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc-
Confidence            356888888887        347899999999999999999999999999999999887765554    5888877743 


Q ss_pred             CCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcC-cEEEEccCCCccccCCCCCCcccccCC
Q 019298          155 PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLK-TLVIADEVYGHLVFGDKPFVPMGVFGS  233 (343)
Q Consensus       155 ~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~-~~~i~D~ay~~~~~~~~~~~~~~~~~~  233 (343)
                            -|++++++++++++++|++.+|.||+..+   .++++++++|+++| +++++|+.++....-    .++ .++ 
T Consensus       128 ------~d~~~l~~~l~~~t~~v~~EspsNP~l~v---~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~----~pL-~~G-  192 (386)
T PF01053_consen  128 ------TDLEALEAALRPNTKLVFLESPSNPTLEV---PDLEAIAKLAKEHGDILVVVDNTFATPYNQ----NPL-ELG-  192 (386)
T ss_dssp             ------TSHHHHHHHHCTTEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTTC-----GG-GGT-
T ss_pred             ------hhHHHHHhhccccceEEEEEcCCCccccc---ccHHHHHHHHHHhCCceEEeeccccceeee----ccC-cCC-
Confidence                  37899999999999999999999999888   78899999999998 999999999863211    111 122 


Q ss_pred             CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHHHHHHHH
Q 019298          234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGNFLE  312 (343)
Q Consensus       234 ~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~  312 (343)
                        -.+++.|.+|.++..|.-+|.+++.++     .+++.++++..... ....++.....+    ++....+--+.++..
T Consensus       193 --aDivv~S~TKyl~Ghsdv~~G~vv~~~-----~~~~~~~l~~~~~~~G~~~~p~da~ll----~rgl~Tl~~R~~~~~  261 (386)
T PF01053_consen  193 --ADIVVHSATKYLSGHSDVMGGAVVVNG-----SSELYDRLREFRRLLGATLSPFDAWLL----LRGLRTLPLRMERQN  261 (386)
T ss_dssp             ---SEEEEETTTTTTTSSSE-EEEEEESS-----HHHHHHHHHHHHHHHT-B--HHHHHHH----HHHHTTHHHHHHHHH
T ss_pred             --ceEEEeeccccccCCcceeeEEEEECc-----hhhhhhhhcchhhhcCccchHHHHHHH----hcCCCcHHHHHHHHH
Confidence              239999999999887766665555332     13677777665432 334455444444    111122223788888


Q ss_pred             HHHHHHHHhhcCCCCce-eeCC
Q 019298          313 NFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       313 ~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      ++...+.+.|+.+|.+. |+.|
T Consensus       262 ~nA~~lA~~L~~hp~V~~V~yP  283 (386)
T PF01053_consen  262 ENAEALAEFLEEHPKVKRVYYP  283 (386)
T ss_dssp             HHHHHHHHHHHTSTTEEEEEET
T ss_pred             HHHHHHHHHHHhCCCCCeEEEc
Confidence            99999999999998877 6655

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....

>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.78  E-value=2.5e-17  Score=153.84  Aligned_cols=243  Identities=19%  Similarity=0.101  Sum_probs=156.9

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      +++.++||..|.+....+ ..+|.+.+++++++++.. ..|.+..+..+|.+.+++.+      + ..+.+++++|+++|
T Consensus        48 dG~~~lD~~~g~~~~~lG-h~~p~i~~a~~~~~~~~~-~~~~~~~~~~~la~~L~~~~------~-~~~~v~~~~sGseA  118 (426)
T PRK00062         48 DGNEYIDYVGSWGPMILG-HAHPEVVEAVIEAAEKGL-SFGAPTELEVELAELVIELV------P-SIEMVRMVNSGTEA  118 (426)
T ss_pred             CCCEEEEcccchhhhhcC-CCCHHHHHHHHHHHHhCC-cCCCCCHHHHHHHHHHHHhC------C-CCCEEEEecCHHHH
Confidence            378999999987553222 278999999999998643 33444444556666666554      1 35789999999999


Q ss_pred             HHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhc-Ccee------------EEeecCCCCCCCCCHHHHHhhhcC---Cc
Q 019298          113 IDVAMALLSR--PGANILLPRPGFPIYELSAAFR-HIEV------------RHFDLLPDKGWEVDLDDIESLADQ---NT  174 (343)
Q Consensus       113 l~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~-g~~~------------~~~~~~~~~~~~~d~~~l~~~~~~---~~  174 (343)
                      +..+++....  .+++|+..+++|+++...+... |...            ..+..........|++.+++.+..   ++
T Consensus       119 ~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~  198 (426)
T PRK00062        119 TMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEI  198 (426)
T ss_pred             HHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCcE
Confidence            9999988543  3578999999999876433222 1100            000000000001268888887742   44


Q ss_pred             eEEEEeCCCCCcccccC-HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCc
Q 019298          175 VALVIINPGNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWR  253 (343)
Q Consensus       175 ~~i~~~~p~nptG~~~~-~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r  253 (343)
                      .++++......+|.+.+ .+.+++|.++|++||+++|+||+|.++..++..  ....++..+.   +.++||.++ .|++
T Consensus       199 aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~~--~~~~~~~~pD---i~~~gK~l~-~G~p  272 (426)
T PRK00062        199 AAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALGG--AQGYYGVTPD---LTTLGKIIG-GGLP  272 (426)
T ss_pred             EEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCcc--HHHHhCCCcc---hHhhhhHhh-CCCc
Confidence            45555533555888875 888999999999999999999999987443211  1111221112   468999987 7899


Q ss_pred             EEEEEEeCCCCCCCchHHHHHHhhh---hc-cccCcchHHHHHHHhccch
Q 019298          254 LGWFVTTDPCGMFRKPKVVERMKKY---FD-ILGDPATFIQVCIMYGCLS  299 (343)
Q Consensus       254 ~G~i~~~~~~~~~~~~~~~~~l~~~---~~-~~~~~~~~~~~a~~~~~l~  299 (343)
                      +|+++++        +++.+.++..   .. .+.+.+++.++++ .+.|+
T Consensus       273 ~ga~~~~--------~~i~~~~~~~~~~~~~~T~~~~p~~~aaa-~a~L~  313 (426)
T PRK00062        273 VGAFGGR--------REIMEQLAPLGPVYQAGTLSGNPLAMAAG-LATLK  313 (426)
T ss_pred             ceeeeEH--------HHHHHhhccCCCceecccCcCCHHHHHHH-HHHHH
Confidence            9999884        3677777532   11 2346778877777 44443

>PRK08114 cystathionine beta-lyase; Provisional

Probab=99.78  E-value=4e-17  Score=149.06  Aligned_cols=218  Identities=12%  Similarity=0.064  Sum_probs=159.1

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH----HhcCceeEEeec
Q 019298           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFDL  153 (343)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~~  153 (343)
                      ....|++.++++-        ..+..+++++++.|+..++.+++++||+|+++...|.+....+    +..|.++..++.
T Consensus        63 t~~~le~~la~LE--------g~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~  134 (395)
T PRK08114         63 THFSLQEAMCELE--------GGAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP  134 (395)
T ss_pred             hHHHHHHHHHHHh--------CCCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC
Confidence            4467888888865        3568888888999999999999999999999999997776554    556888887753


Q ss_pred             CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhc--CcEEEEccCCCccccCCCCCCccccc
Q 019298          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL--KTLVIADEVYGHLVFGDKPFVPMGVF  231 (343)
Q Consensus       154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~--~~~~i~D~ay~~~~~~~~~~~~~~~~  231 (343)
                             .|.+.+++++++++++|++.+|.||+|.+   .++++|+++|+++  |+++++|.+++....  .   ....+
T Consensus       135 -------~d~~~l~~~l~~~TrlV~~EtpsNp~~~v---~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~--~---~pl~~  199 (395)
T PRK08114        135 -------LIGADIAKLIQPNTKVVFLESPGSITMEV---HDVPAIVAAVRSVNPDAVIMIDNTWAAGVL--F---KALDF  199 (395)
T ss_pred             -------CCHHHHHHhcCCCceEEEEECCCCCCCEe---ecHHHHHHHHHHhCCCCEEEEECCCccccc--c---CHHHc
Confidence                   36789999999899999999999999999   5688889999998  499999999986321  1   11112


Q ss_pred             CCCCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHHHHH
Q 019298          232 GSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMIHGN  309 (343)
Q Consensus       232 ~~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~  309 (343)
                         +-.++++|.+|.++.+| ...|.++. +       +++.+.++.... .....++...+.+ ..-|   ..+--+.+
T Consensus       200 ---GaDivv~S~tKyl~Ghsdv~~G~v~~-~-------~~~~~~l~~~~~~~G~~~~p~~a~l~-~rgl---~TL~lR~~  264 (395)
T PRK08114        200 ---GIDISIQAGTKYLVGHSDAMIGTAVA-N-------ARCWEQLRENSYLMGQMVDADTAYMT-SRGL---RTLGVRLR  264 (395)
T ss_pred             ---CCcEEEEcCcccccCCCcceeEEEEc-C-------HHHHHHHHHHHHhccCCCCHHHHHHH-HcCC---CcHHHHHH
Confidence               23499999999988887 44554443 2       345555554332 2345566655554 2222   11222778


Q ss_pred             HHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          310 FLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       310 ~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      +..++...+.++|+++|.+. |+.|
T Consensus       265 ~~~~na~~va~~L~~hp~V~~V~yP  289 (395)
T PRK08114        265 QHEESSLKVAEWLAEHPEVARVNHP  289 (395)
T ss_pred             HHHHHHHHHHHHHHcCCCEeEEECC
Confidence            88889999999999988776 5554

>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue

Probab=99.78  E-value=2.2e-16  Score=145.42  Aligned_cols=253  Identities=21%  Similarity=0.228  Sum_probs=174.6

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCC----CCCC----CCCHHHHHHHHHHHhhhCCCCCCC-CcEEEecChHHHHHHHHHHh-
Q 019298           51 FHTTHVATEAVAEALLSEKFNG----YAPT----AGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALL-  120 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~----Y~~~----~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l-  120 (343)
                      .+.++.+.+++.+.+.+...+.    +...    .-..++|+.+++++      +.++ ++|++++|++.++..++.++ 
T Consensus         9 ~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~l------g~~~~~~v~~~~~~t~a~~~~~~~l~   82 (371)
T PF00266_consen    9 GPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLL------GAPPDEEVVFTSNGTEALNAVASSLL   82 (371)
T ss_dssp             -B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHH------TSSTTEEEEEESSHHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhc------CCccccccccccccchhhhhhhhccc
Confidence            3578889999988876432111    1111    12247888888888      4567 89999999999999999999 


Q ss_pred             --cCCCCeEEEeCCCCcchH----HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298          121 --SRPGANILLPRPGFPIYE----LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (343)
Q Consensus       121 --~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~  194 (343)
                        .++|++|++..-.|++..    ...+..|.++..++.+.  +..+|++++++.+++++++++++..+|.||...+   
T Consensus        83 ~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~--~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~p---  157 (371)
T PF00266_consen   83 NPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADP--GGSLDLEDLEEALNPDTRLVSISHVENSTGVRNP---  157 (371)
T ss_dssp             HHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGT--TSSCSHHHHHHHHHTTESEEEEESBETTTTBBSS---
T ss_pred             cccccccccccccccccccccccccccccchhhhccccccc--cchhhhhhhhhhhccccceEEeecccccccEEee---
Confidence              789999999999997655    34456789999888764  3468999999999999999999999999999965   


Q ss_pred             HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (343)
Q Consensus       195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~  274 (343)
                      +++|.++|+++|+++++|.+++...    .+..+..+   +-.++++|..|.+|.+|  +|++.+++        +.+++
T Consensus       158 i~~I~~~~~~~~~~~~vD~~~~~g~----~~id~~~~---~~D~~~~s~~Kl~gp~G--~g~l~v~~--------~~~~~  220 (371)
T PF00266_consen  158 IEEIAKLAHEYGALLVVDAAQSAGC----VPIDLDEL---GADFLVFSSHKLGGPPG--LGFLYVRP--------EAIER  220 (371)
T ss_dssp             HHHHHHHHHHTTSEEEEE-TTTTTT----SS--TTTT---TESEEEEESTSTTSSST--EEEEEEEH--------HHHHH
T ss_pred             eceehhhhhccCCceeEechhcccc----cccccccc---ccceeeecccccCCCCc--hhhheehh--------hhhhc
Confidence            6778888999999999999998632    22222222   22389999999545455  79988864        56666


Q ss_pred             Hhhhhc---------------------c-ccCcchHHHHHHHhccchhhHHH-HH-HHHHHHHHHHHHHHhhcCCCCcee
Q 019298          275 MKKYFD---------------------I-LGDPATFIQVCIMYGCLSTIMQI-MI-HGNFLENFAGSCVPSYKLIPELIN  330 (343)
Q Consensus       275 l~~~~~---------------------~-~~~~~~~~~~a~~~~~l~~~~~~-l~-~~~~~~~~~~~~~~~L~~~~g~~~  330 (343)
                      ++....                     . .+.++.....++ ..+++...+. ++ .+++..+..+.+.+.|.+++++.+
T Consensus       221 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l-~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~  299 (371)
T PF00266_consen  221 LRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYAL-NEALKLLEEIGIERIRERIRELAEYLREALEELPGIEV  299 (371)
T ss_dssp             HHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEE
T ss_pred             cccccccccccccccchhcccccccccccccceeeehhhhH-HHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeE
Confidence            643211                     0 012333333333 3333221111 11 678888889999999998887776


Q ss_pred             eC
Q 019298          331 FK  332 (343)
Q Consensus       331 ~~  332 (343)
                      ..
T Consensus       300 ~~  301 (371)
T PF00266_consen  300 LG  301 (371)
T ss_dssp             SS
T ss_pred             ee
Confidence            44

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....

>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase

Probab=99.78  E-value=6.8e-17  Score=149.04  Aligned_cols=211  Identities=14%  Similarity=0.130  Sum_probs=145.9

Q ss_pred             CcEEEecChH-HHHHHHHHHhcC---CCCeEEEeCCCCcchHHHHHhcCceeEEeec-CCCCCCCCCHHHHHhhhcC---
Q 019298          101 NDVFVTSGCT-QAIDVAMALLSR---PGANILLPRPGFPIYELSAAFRHIEVRHFDL-LPDKGWEVDLDDIESLADQ---  172 (343)
Q Consensus       101 ~~i~~~~g~~-~al~~~~~~l~~---~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~d~~~l~~~~~~---  172 (343)
                      +..++++|++ .++.+++.++..   +||.|+++.-+|.+....+...|++++.++. ..++++.+|++++++++++   
T Consensus       124 ~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~  203 (444)
T TIGR03531       124 KSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLDGDELTTDVEDIERAIEEIGP  203 (444)
T ss_pred             CEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHhccC
Confidence            4688888888 688888777652   5899999999999999999999999999986 3456789999999999975   


Q ss_pred             CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCC-EEEEccCccccCCCC
Q 019298          173 NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRWIVPG  251 (343)
Q Consensus       173 ~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~-~i~~~S~sK~~~~~G  251 (343)
                      +..++++.+|+  |+.....+++++|.++|++||+++|+|++|+.....-..... ... ..++ .+++.|++|.+..+|
T Consensus       204 kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~-~g~-~~Grad~vv~s~hK~l~~pg  279 (444)
T TIGR03531       204 DNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELIN-KAI-KVGRVDAVVSSTDKNFMVPV  279 (444)
T ss_pred             CCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhh-ccc-cccCCCeEEEeCccCCCCCC
Confidence            44566666665  443334489999999999999999999999963211000000 000 1112 477889999998877


Q ss_pred             CcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhh-HHHHHHHHHHHHHHHHHHHhhcCC
Q 019298          252 WRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTI-MQIMIHGNFLENFAGSCVPSYKLI  325 (343)
Q Consensus       252 ~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~-~~~l~~~~~~~~~~~~~~~~L~~~  325 (343)
                      .  |+++..+      ++++.++++...... ..+...+.+. ..++... ..+.++.++..++++.+.+.|+++
T Consensus       280 ~--Gg~I~~~------d~el~~~i~~~y~g~-~~~s~~~~~~-~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l  344 (444)
T TIGR03531       280 G--GAIIYSF------DENFIQEISKSYPGR-ASASPSLDVL-ITLLSLGSKGYLELLKERKEMYKYLKELLQKL  344 (444)
T ss_pred             C--EEEEEEC------CHHHHHHHHHhccCC-CCChHHHHHH-HHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6  6655432      356778777654322 2333445444 4444432 333447788888888888887764

In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.

>PRK05937 8-amino-7-oxononanoate synthase; Provisional

Probab=99.77  E-value=1.2e-16  Score=146.77  Aligned_cols=258  Identities=17%  Similarity=0.099  Sum_probs=157.2

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC-------CCCCCCC------CCCCHHHHHHHHHHHhhhCCCCCCC
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE-------KFNGYAP------TAGLPLTRRAIAEYLSRDLPYKLTP  100 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~Y~~------~~g~~~lr~~ia~~~~~~~~~~~~~  100 (343)
                      ....++|+..+   |.++..+|.+.+++.+++..-       ..+..+.      ..-..++|+.+|++++      . +
T Consensus         3 ~~~~~~~~s~~---YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~------~-~   72 (370)
T PRK05937          3 ESLSIDFVTND---FLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHG------A-P   72 (370)
T ss_pred             CCceEEeECCC---ccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhC------C-C
Confidence            35689999888   456777888888887776542       0111111      1234678888888883      2 2


Q ss_pred             CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------Cc
Q 019298          101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NT  174 (343)
Q Consensus       101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~  174 (343)
                      +.+++++|. .++..+...+.++||.|++..-.|......++........++       ..|+++|++.++.      .+
T Consensus        73 ~~l~~~sG~-~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~  144 (370)
T PRK05937         73 EAFIVPSGY-MANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFR-------HNDLDHLESLLESCRQRSFGR  144 (370)
T ss_pred             eEEEECChH-HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEec-------CCCHHHHHHHHHhhhccCCCc
Confidence            345556655 555555556667888988888888877776665433333332       2578989888762      34


Q ss_pred             eEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE
Q 019298          175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL  254 (343)
Q Consensus       175 ~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~  254 (343)
                      .++++++++|++|.+.+   +++|.++|+++|+++++|++|+...++.........+.-.+..+.+.||||.+|..|.  
T Consensus       145 ~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G~--  219 (370)
T PRK05937        145 IFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMGA--  219 (370)
T ss_pred             EEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCce--
Confidence            56678899999999976   6778888889999999999999754432211100111111123678999999988873  


Q ss_pred             EEEEEeCCCCCCCchHHHHHHhhh---hccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcC
Q 019298          255 GWFVTTDPCGMFRKPKVVERMKKY---FDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       255 G~i~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~  324 (343)
                      | ++..        +++...+...   .......++....++ .+++....+..+ .++++++.++++.+.|..
T Consensus       220 ~-vl~~--------~~~~~~~~~~~~~~~~s~~~~~~~~~a~-~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~  283 (370)
T PRK05937        220 A-LLSS--------SEVKQDLMLNSPPLRYSTGLPPHLLISI-QVAYDFLSQEGELARKQLFRLKEYFAQKFSS  283 (370)
T ss_pred             E-EEcC--------HHHHHHHHHhCCCCeecCCCCHHHHHHH-HHHHHHHHhCcHHHHHHHHHHHHHHHHhcCC
Confidence            3 3332        2344444321   111233445544433 333321111111 567778888888877764

>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.77  E-value=7.9e-17  Score=149.64  Aligned_cols=226  Identities=16%  Similarity=0.079  Sum_probs=154.7

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchH----HHHHhcCceeEEeecC
Q 019298           79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRHIEVRHFDLL  154 (343)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~  154 (343)
                      ...+++.++++.+        .+..++++++++++..++.+++++||+|+++...|.+..    ..+...|++++.++ +
T Consensus        71 ~~~le~~la~l~g--------~~~~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-~  141 (437)
T PRK05613         71 VEALENRIASLEG--------GVHAVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE-N  141 (437)
T ss_pred             HHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-C
Confidence            4678888888873        245555555568888888888899999999999998763    34466788888886 2


Q ss_pred             CCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC
Q 019298          155 PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST  234 (343)
Q Consensus       155 ~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~  234 (343)
                      +     .|++++++++++++++|++.++.||+|.+   .++++|+++|+++|+++|+|.+++....    ..+. .+   
T Consensus       142 ~-----~d~e~l~~~l~~~tk~V~~e~~~Np~~~v---~di~~I~~la~~~gi~livD~t~a~g~~----~~p~-~~---  205 (437)
T PRK05613        142 P-----DDPESWQAAVQPNTKAFFGETFANPQADV---LDIPAVAEVAHRNQVPLIVDNTIATAAL----VRPL-EL---  205 (437)
T ss_pred             C-----CCHHHHHHhCCccCeEEEEECCCCCCCcc---cCHHHHHHHHHHcCCeEEEECCCccccc----cChH-Hh---
Confidence            2     27899999999889999999999999988   5578888889999999999999865321    1111 12   


Q ss_pred             CCEEEEccCccccCCCCCcEEEEEEeCCCCCCC----------------------------chHHHHHHh--hhhccccC
Q 019298          235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR----------------------------KPKVVERMK--KYFDILGD  284 (343)
Q Consensus       235 ~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~----------------------------~~~~~~~l~--~~~~~~~~  284 (343)
                      +-.+++.|++|.++..|..+|.+++.++...+.                            ...+..+.+  ........
T Consensus       206 GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~  285 (437)
T PRK05613        206 GADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGAT  285 (437)
T ss_pred             CCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCCC
Confidence            224999999999988887777766643321110                            000111111  11222345


Q ss_pred             cchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          285 PATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       285 ~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      .+++..+.+ ..-|   ..+-.+.++..++...+.+.|+.+|.+. ++.|
T Consensus       286 ~~p~~a~l~-~rgl---~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V~yP  331 (437)
T PRK05613        286 LSPFNAWVT-AQGL---DTLSLRLERHNENAIKVAEFLNNHEKVAKVNFA  331 (437)
T ss_pred             CCHHHHHHH-Hccc---CcHHHHHHHHHHHHHHHHHHHHcCCCcceEECC
Confidence            566655555 2221   2222277888889999999999988775 5444

>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]

Probab=99.77  E-value=6.2e-17  Score=144.32  Aligned_cols=203  Identities=17%  Similarity=0.188  Sum_probs=161.3

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc----CCCC--CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS----EKFN--GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~  107 (343)
                      +.+.+.|+.+..     .+.++.+.+++...+..    .+..  .|....+..+.|+.+|+++      +.++.+|++|+
T Consensus        41 ~~~~vyld~~at-----~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklI------nAd~~dIiFts  109 (428)
T KOG1549|consen   41 GTRPVYLDNQAT-----GPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLI------NADPSDIVFTS  109 (428)
T ss_pred             CCccEEEecCcC-----CCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHh------CCCCCcEEEeC
Confidence            667888888873     35678888888877643    2221  2222334678999999999      56888899999


Q ss_pred             ChHHHHHHHHHHhc-CCCC----eEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEE
Q 019298          108 GCTQAIDVAMALLS-RPGA----NILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVI  179 (343)
Q Consensus       108 g~~~al~~~~~~l~-~~gd----~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~  179 (343)
                      |+|++++++++... ..+|    +|++..-.|++....+   +..|+.++++|+.  +...+|++.+++.++++++++.+
T Consensus       110 ~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~--~~~~~d~~~~~~~i~~~T~lv~I  187 (428)
T KOG1549|consen  110 GATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE--DSGLVDISKLREAIRSKTRLVSI  187 (428)
T ss_pred             CchHHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC--ccccccHHHHHHhcCCCceEEEE
Confidence            99999999999974 3455    8999888887765544   5568999999887  45568999999999999999999


Q ss_pred             eCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298          180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT  259 (343)
Q Consensus       180 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~  259 (343)
                      ...+|.+|+.+|   +++|+++|+++++.+++|.|++-    |.-+..+..++.+   ++..|.+|.||.+|  +|++.+
T Consensus       188 ~~Vnn~~gv~~P---v~EI~~icr~~~v~v~~DaAQav----G~i~vDV~eln~D---~~s~s~HK~ygp~~--iGaLYv  255 (428)
T KOG1549|consen  188 MHVNNEIGVLQP---VKEIVKICREEGVQVHVDAAQAV----GKIPVDVQELNAD---FLSISAHKIYGPPG--IGALYV  255 (428)
T ss_pred             EecccCcccccc---HHHHHHHhCcCCcEEEeehhhhc----CCccccHHHcCch---heeeecccccCCCc--ceEEEE
Confidence            999999999955   68888899999999999999997    4444455555544   88889999999999  898888


Q ss_pred             eC
Q 019298          260 TD  261 (343)
Q Consensus       260 ~~  261 (343)
                      ..
T Consensus       256 r~  257 (428)
T KOG1549|consen  256 RR  257 (428)
T ss_pred             cc
Confidence            63

>PRK04612 argD acetylornithine transaminase protein; Provisional

Probab=99.77  E-value=1.5e-16  Score=147.26  Aligned_cols=269  Identities=16%  Similarity=0.093  Sum_probs=173.0

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++.++|+..|.-.  ..++ .+|.+.++++++++...  .+... ...+....+++.+....+   ..+.+++++++++
T Consensus        38 dG~~ylD~~~g~~~--~~lGh~~p~v~~ai~~q~~~~~--~~~~~-~~~~~~~~la~~L~~~~~---~~~~v~f~~sGse  109 (408)
T PRK04612         38 QGREYLDLAAGIAV--CGLGHNDPDLVAALTEQAGKLW--HTSNV-FYSAPPLKLAEELVTASR---FAEKVFLCNSGTE  109 (408)
T ss_pred             CCCEEEEcCccHhh--ccCCCCCHHHHHHHHHHHHhcc--ccccc-cCCHHHHHHHHHHHhhCC---CCCEEEEcCchHH
Confidence            38899999888633  1233 78999999999987532  11111 122344455565543221   1279999999999


Q ss_pred             HHHHHHHHhcC----C-----CCeEEEeCCCCcchHHHHHhc-CceeEE--e-ecCCC--CCCCCCHHHHHhhhcCCceE
Q 019298          112 AIDVAMALLSR----P-----GANILLPRPGFPIYELSAAFR-HIEVRH--F-DLLPD--KGWEVDLDDIESLADQNTVA  176 (343)
Q Consensus       112 al~~~~~~l~~----~-----gd~vl~~~p~~~~~~~~~~~~-g~~~~~--~-~~~~~--~~~~~d~~~l~~~~~~~~~~  176 (343)
                      |++.+++....    .     ..+|+....+|++....+... +.....  + +..+.  .-.-.|++.+++.+..+..+
T Consensus       110 A~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~a  189 (408)
T PRK04612        110 ANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGDVA  189 (408)
T ss_pred             HHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCCCCEE
Confidence            99999987531    1     246888888888765444332 211100  0 00000  00012788899888766778


Q ss_pred             EEEeCCCCCcccccC--HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE
Q 019298          177 LVIINPGNPCGNVYS--YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL  254 (343)
Q Consensus       177 i~~~~p~nptG~~~~--~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~  254 (343)
                      +++..|.+++|-+++  .+.+++|.++|++||+++|+||+|.++...+... .   ....+.+..+.+|||.++ +|+|+
T Consensus       190 avi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-a---~~~~~~~pdi~t~~K~l~-~G~pi  264 (408)
T PRK04612        190 AVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLF-A---HWQEQVTPDIVTLAKALG-GGFPI  264 (408)
T ss_pred             EEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchh-h---hhhcCCCCCEEEEcchhc-CCCce
Confidence            888999887776655  6789999999999999999999999876654321 1   112234467789999986 78999


Q ss_pred             EEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC
Q 019298          255 GWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       255 G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~  324 (343)
                      ||+++++        ++.+.+... ...+++.+++.++++ .+.|+...+ .+..++++++.+.+.+.|++
T Consensus       265 ga~~~~~--------~~~~~~~~~~~~~t~~~~p~~~aaa-~a~L~~~~~-~~l~~~~~~~g~~l~~~l~~  325 (408)
T PRK04612        265 GAMLAGP--------KVAETMQFGAHGTTFGGNPLAAAVA-RVALRKLAS-PQIAANVARQSAALRAGLEA  325 (408)
T ss_pred             EEEEECH--------HHHhhhcCCCcCCCCCCCHHHHHHH-HHHHHHHHh-ccHHHHHHHHHHHHHHHHHH
Confidence            9999853        566666543 233556788888888 455432211 12566666666666666654

>PRK06777 4-aminobutyrate aminotransferase; Provisional

Probab=99.77  E-value=1.4e-16  Score=148.40  Aligned_cols=288  Identities=16%  Similarity=0.121  Sum_probs=178.4

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      +++.++|+..|.-... .-..+|.+.+++++++++.....+..  ...+....+++.+..... .-..+.+++++++++|
T Consensus        38 dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~~~f~~sGseA  113 (421)
T PRK06777         38 EGREYIDFAAGIAVLN-TGHRHPKVVAAVRQQLDQFTHTAYQI--VPYASYVTLAERINALAP-IDGPAKTAFFTTGAEA  113 (421)
T ss_pred             CCCEEEEcccCHHhhc-cCCCCHHHHHHHHHHHhhcccccccc--cCChHHHHHHHHHHHhCC-CCCCceEEEeCCcHHH
Confidence            3888999988763311 12268899999999987643222211  112233344444433211 0124689999999999


Q ss_pred             HHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhc-Cce--e-----------EEeecCCCCCCC----CCHHHHHhhhcC
Q 019298          113 IDVAMALLSR--PGANILLPRPGFPIYELSAAFR-HIE--V-----------RHFDLLPDKGWE----VDLDDIESLADQ  172 (343)
Q Consensus       113 l~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~-g~~--~-----------~~~~~~~~~~~~----~d~~~l~~~~~~  172 (343)
                      ++.+++....  ...+|+..+-+|++....+... +..  .           ..++. ++....    -+++.+++.+..
T Consensus       114 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~l~~~~~~  192 (421)
T PRK06777        114 VENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALY-PNELHGVSVEEALSSVERLFKA  192 (421)
T ss_pred             HHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCC-CccccCcCHHHHHHHHHHHHHh
Confidence            9999887531  2357888888887765544432 210  0           11111 100001    125567776642


Q ss_pred             ----CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccc
Q 019298          173 ----NTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKR  246 (343)
Q Consensus       173 ----~~~~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~  246 (343)
                          +..+.++..| .+..|. +++.+.+++|.++|++||+++|+||+|.++.+.+.. .....++....++   ++||.
T Consensus       193 ~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~-~~~~~~~~~pDiv---~~sK~  268 (421)
T PRK06777        193 DIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKL-FAMEYYDVKPDLI---TMAKS  268 (421)
T ss_pred             ccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCch-hhhhhcCCCCCEE---eeehh
Confidence                2334455556 677886 578999999999999999999999999998666542 2223333222322   69999


Q ss_pred             cCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC-
Q 019298          247 WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL-  324 (343)
Q Consensus       247 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~-  324 (343)
                      ++ +|+|+||++++.        ++++.+.... ..+++.++++++++ .+.|+...+ -+..++++++.+.+.+.|++ 
T Consensus       269 l~-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~p~~~aaa-~a~L~~~~~-~~l~~~~~~~g~~l~~~L~~l  337 (421)
T PRK06777        269 LG-GGMPISAVVGRA--------EVMDAPAPGGLGGTYAGNPLAVAAA-LAVLDVIAE-EKLCQRALILGAHLVEVLEKA  337 (421)
T ss_pred             hc-CCCceEEEEEcH--------HHHhccCCCCCCCCCCcCHHHHHHH-HHHHHHHHh-ccHHHHHHHHHHHHHHHHHHH
Confidence            98 899999999853        5666665432 23567788888888 565542211 12666777777777777765 


Q ss_pred             ---CCCceeeCCCCceEee
Q 019298          325 ---IPELINFKSTGSSLKY  340 (343)
Q Consensus       325 ---~~g~~~~~~~~g~~~~  340 (343)
                         .|.+....+.|.+|.+
T Consensus       338 ~~~~~~i~~vrg~G~~~~i  356 (421)
T PRK06777        338 KASCPAIVDIRARGSMVAV  356 (421)
T ss_pred             HHhCCCeEEecCceEEEEE
Confidence               3444445788888764

>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type

Probab=99.76  E-value=2.1e-16  Score=147.37  Aligned_cols=287  Identities=14%  Similarity=0.082  Sum_probs=166.4

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++.++|+..|.-..  .++ .+|.+.+++++++.+.....+..  ...+.+..+++.+.+... ....+.+++++++++
T Consensus        31 dG~~ylD~~~g~~~~--~lGh~~p~v~~a~~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~v~f~~sGse  105 (420)
T TIGR00700        31 DGNRLIDFASGIAVL--NIGHSHPRVVDAVRTQVAEFTHTCFMV--TPYEGYVALAEKLNRIAP-GSGPKKSVFFNSGAE  105 (420)
T ss_pred             CCCEEEECccCHHhc--cCCCCCHHHHHHHHHHHHhccCccccc--cCChHHHHHHHHHHHhCC-CCCCCEEEEeCCcHH
Confidence            388999998886332  233 68999999999987643222211  112223344444433111 112368999999999


Q ss_pred             HHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhc-Cc-------------eeEEeecCCCC---------CCCCCHHHH
Q 019298          112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDK---------GWEVDLDDI  166 (343)
Q Consensus       112 al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~---------~~~~d~~~l  166 (343)
                      |++.+++...  ....+|+...-+|++....+... +.             .+..++.....         .+.-+++.+
T Consensus       106 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (420)
T TIGR00700       106 AVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAA  185 (420)
T ss_pred             HHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHH
Confidence            9999988753  12357888888887765443332 11             01111111000         000014566


Q ss_pred             Hhhhc----CCceEEEEeCC-CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEE
Q 019298          167 ESLAD----QNTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL  240 (343)
Q Consensus       167 ~~~~~----~~~~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~  240 (343)
                      ++.+.    .+..+.++..| ..-+|..+ +.+.+++|.++|++||+++|+||+|.++.+.+. ...+..++....   +
T Consensus       186 ~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~-~~a~~~~~~~pD---i  261 (420)
T TIGR00700       186 RAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGA-MFACEHEGPEPD---L  261 (420)
T ss_pred             HHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccch-hHHHhhcCCCCC---E
Confidence            66542    23334455566 66778876 455699999999999999999999999876653 212222222222   3


Q ss_pred             ccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchh--hHHHHHHHHHHHHHHHH
Q 019298          241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLST--IMQIMIHGNFLENFAGS  317 (343)
Q Consensus       241 ~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~~  317 (343)
                      .++||.++ +|+|+||++++.        ++.+.+... ...+.+.++++++++ .+.|+-  ...   ..+++++..+.
T Consensus       262 ~~lsK~l~-~G~pig~v~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa-~a~l~~l~~~~---~~~~~~~~g~~  328 (420)
T TIGR00700       262 ITTAKSLA-DGLPLSGVTGRA--------EIMDAPAPGGLGGTYAGNPLACAAA-LAVLAIIESEG---LIERARQIGRL  328 (420)
T ss_pred             EEeecccc-CCcceEEEEecH--------HHHhhcCCCCcCCCCCcCHHHHHHH-HHHHHHHHhcc---HHHHHHHHHHH
Confidence            45999987 899999999853        677766533 233567788888887 444421  112   33333333333


Q ss_pred             HHHhh----cCCCCceeeCCCCceEeeec
Q 019298          318 CVPSY----KLIPELINFKSTGSSLKYLD  342 (343)
Q Consensus       318 ~~~~L----~~~~g~~~~~~~~g~~~~~~  342 (343)
                      +.+.|    ..+|.+....+. |.++|+.
T Consensus       329 l~~~L~~l~~~~~~~~~vrg~-G~~~~i~  356 (420)
T TIGR00700       329 VTDRLTTLKAVDPRIGDVRGL-GAMIAVE  356 (420)
T ss_pred             HHHHHHHHHhhCCCEEEeecc-ceEEEEE
Confidence            33333    334444433455 6666664

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>TIGR01885 Orn_aminotrans ornithine aminotransferase

Probab=99.76  E-value=5.1e-16  Score=144.28  Aligned_cols=277  Identities=14%  Similarity=0.078  Sum_probs=173.3

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      ++++.+||..+.... +.--.+|++.++++++++... ...........++.+.+++++        ..+.+++++++++
T Consensus        35 ~g~~~lD~~s~~~~~-~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~SGs~  105 (401)
T TIGR01885        35 EGKRYLDFLSAYSAV-NQGHCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLF--------GYDKVLPMNTGAE  105 (401)
T ss_pred             CCCEEEEcccCHhhc-cCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhc--------CCCEEEEeCccHH
Confidence            378889998875331 111258999999999886432 111001122345555555554        2468999999999


Q ss_pred             HHHHHHHHhc----------CCCCeEEEeCCCCcch-HHHHHhcCc------------eeEEeecCCCCCCCCCHHHHHh
Q 019298          112 AIDVAMALLS----------RPGANILLPRPGFPIY-ELSAAFRHI------------EVRHFDLLPDKGWEVDLDDIES  168 (343)
Q Consensus       112 al~~~~~~l~----------~~gd~vl~~~p~~~~~-~~~~~~~g~------------~~~~~~~~~~~~~~~d~~~l~~  168 (343)
                      ++..+++.+.          ...++|+..+-+|.+. .......+.            .+..++.       .|++.+++
T Consensus       106 A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~  178 (401)
T TIGR01885       106 AVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-------NNLEALEE  178 (401)
T ss_pred             HHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-------CCHHHHHH
Confidence            9999998852          1236788888887653 333332221            1111211       26888888


Q ss_pred             hhc---CCceEEEEeCCCCCcccccC-HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCc
Q 019298          169 LAD---QNTVALVIINPGNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS  244 (343)
Q Consensus       169 ~~~---~~~~~i~~~~p~nptG~~~~-~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~s  244 (343)
                      .++   ++..++++..+++++|...+ .+.+++|.++|++||+++|+||+|.++.+.+... ........++ ++  ++|
T Consensus       179 ~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~-~~~~~~~~~d-i~--~~g  254 (401)
T TIGR01885       179 ALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLL-CVDHENVKPD-IV--LLG  254 (401)
T ss_pred             HHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhh-HHhhcCCCCC-EE--Eee
Confidence            774   34456666666899999986 4579999999999999999999998766555321 1111111122 33  467


Q ss_pred             cccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhc
Q 019298          245 KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYK  323 (343)
Q Consensus       245 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~  323 (343)
                      |.++..++|+|+++++        +++++.++.. ...+.+.+++.+.++ .++|+...+ ....++++++.+.+.+.|+
T Consensus       255 K~l~~g~~~ig~v~~~--------~~i~~~~~~~~~~~t~~~~p~~~~aa-~a~L~~i~~-~~l~~~~~~~~~~~~~~L~  324 (401)
T TIGR01885       255 KALSGGVYPVSAVLAD--------DDVMLTIKPGEHGSTYGGNPLACAVA-VAALEVLEE-EKLAENAEKLGEIFRDQLK  324 (401)
T ss_pred             ccccCCCCCcEEEEEc--------HHHHhhccCCCCCCCCCCCHHHHHHH-HHHHHHHHh-ccHHHHHHHHHHHHHHHHH
Confidence            9998777999999985        3677776543 223445577777777 555543211 0255677777888888888


Q ss_pred             CCC-Cc-eeeCCCCceEe
Q 019298          324 LIP-EL-INFKSTGSSLK  339 (343)
Q Consensus       324 ~~~-g~-~~~~~~~g~~~  339 (343)
                      +++ ++ ....+.|.++.
T Consensus       325 ~l~~~~~~~~~g~g~~~~  342 (401)
T TIGR01885       325 KLPKPIITEVRGRGLLNA  342 (401)
T ss_pred             hccCCceeEEeecCeeEE
Confidence            762 22 12245565554

This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.

>PRK13237 tyrosine phenol-lyase; Provisional

Probab=99.75  E-value=7.3e-16  Score=140.88  Aligned_cols=243  Identities=16%  Similarity=0.102  Sum_probs=162.8

Q ss_pred             CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH-HHhcCceeEE
Q 019298           72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS-AAFRHIEVRH  150 (343)
Q Consensus        72 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~-~~~~g~~~~~  150 (343)
                      .|........|++.+++++        ..++++.+++++.++++++...+++||.|  +..+|...... ....|.....
T Consensus        73 ~Yagd~s~~~LE~~vAe~l--------G~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvD  142 (460)
T PRK13237         73 AYAGSRNFYHLEETVQEYY--------GFKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVD  142 (460)
T ss_pred             hhcCCCcHHHHHHHHHHHH--------CCCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEe
Confidence            4887778899999999999        45689999999999998877678899975  44444333333 5666775443


Q ss_pred             eecC--------CCCCCCCCHHHHHhhhcCC----ceEEEEeCCCCCc-ccccCHHHHHHHHHHHhhcCcEEEEccCCCc
Q 019298          151 FDLL--------PDKGWEVDLDDIESLADQN----TVALVIINPGNPC-GNVYSYQHLQKLAETANKLKTLVIADEVYGH  217 (343)
Q Consensus       151 ~~~~--------~~~~~~~d~~~l~~~~~~~----~~~i~~~~p~npt-G~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~  217 (343)
                      +..+        ....+.+|++++++++++.    ++++.+.+++|.. |+..|.++++++.++|++||+.+|+|.+...
T Consensus       143 i~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~  222 (460)
T PRK13237        143 IIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCV  222 (460)
T ss_pred             eecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchh
Confidence            3211        2245789999999998753    3356777888887 7999999999999999999999999999874


Q ss_pred             c----c------cCCCCCC----cccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc--
Q 019298          218 L----V------FGDKPFV----PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI--  281 (343)
Q Consensus       218 ~----~------~~~~~~~----~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~--  281 (343)
                      -    .      +.+.+..    .+.++.    .+++.|++|.++.+-  -|++++.+       +++.++++...-.  
T Consensus       223 gna~fI~~re~~y~~~~i~ei~~e~~s~a----D~~t~S~~K~~~~~~--GG~i~t~D-------~eL~~~~r~~~~~~e  289 (460)
T PRK13237        223 ENAYFIKEREEGYQDKSIKEIVHEMFSYA----DGCTMSGKKDCLVNI--GGFLAMND-------EELFDEAKELVVVYE  289 (460)
T ss_pred             cChhhhcccccccCCCcHhHHhhhccCcC----cEEEEeCCCCCCCCC--ceEEEECC-------HHHHHHHHHhccccC
Confidence            3    1      1111110    011222    378889999977652  37777653       5788888877311  


Q ss_pred             ----ccCcchHHHHHHHhccchhhHHHHH--HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298          282 ----LGDPATFIQVCIMYGCLSTIMQIMI--HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD  342 (343)
Q Consensus       282 ----~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~  342 (343)
                          ++..+.--..++..++    .++++  ..+..-+..++|.+.|.+. |+++..|.||.-+|+|
T Consensus       290 G~~tygg~~grd~~alAvgl----~E~~~~~y~~~ri~~~~~l~~~L~~~-Gvpv~~p~ggH~v~vd  351 (460)
T PRK13237        290 GMPSYGGMAGRDMEAMAIGI----EESVQYEYIEHRVGQVRYLGEKLLAA-GVPIVEPVGGHAVFLD  351 (460)
T ss_pred             CCcCCCChhhhHHHHHHhHH----HhhchHHHHHHHHHHHHHHHHHHHHC-CCceecCCCceEEEEE
Confidence                1122221223331222    22222  3333334556677777776 8998899999999886

>PRK06918 4-aminobutyrate aminotransferase; Reviewed

Probab=99.75  E-value=4.9e-16  Score=146.08  Aligned_cols=284  Identities=13%  Similarity=0.112  Sum_probs=169.5

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEecChHH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQ  111 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~  111 (343)
                      +++++||..|.-..  .++ .+|.+.++++++++.......  .....+.+..+++.+.....  -.. +.+++++++++
T Consensus        53 G~~ylD~~~g~~~~--~lGh~~p~v~~ai~~q~~~~~~~~~--~~~~~~~~~~la~~L~~~~p--~~~~~~v~f~~sGse  126 (451)
T PRK06918         53 GNQYIDFAGAIGTI--NVGHSHPKVKEALHKQVDQYIHTGF--NVMMYEPYIELAEKLAALAP--GSFDKKVLFLNSGAE  126 (451)
T ss_pred             CCEEEEcCCchhhc--CCCCCCHHHHHHHHHHHHhccCccc--cccccHHHHHHHHHHHHhCC--CCCCCEEEEcCCcHH
Confidence            88899998886332  233 789999999999875321111  11122344555555543221  112 58999999999


Q ss_pred             HHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcCce--------------eEEeecCCC--CCCCCC--------HHH
Q 019298          112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIE--------------VRHFDLLPD--KGWEVD--------LDD  165 (343)
Q Consensus       112 al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g~~--------------~~~~~~~~~--~~~~~d--------~~~  165 (343)
                      |.+.+++...  ....+|+....+|++....+......              +..++....  ...+..        ++.
T Consensus       127 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (451)
T PRK06918        127 AVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEE  206 (451)
T ss_pred             HHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHH
Confidence            9999988753  12357888888887765544332110              111111100  000110        123


Q ss_pred             HHhhh----cCCceEEEEeCCCC-Cccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEE
Q 019298          166 IESLA----DQNTVALVIINPGN-PCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT  239 (343)
Q Consensus       166 l~~~~----~~~~~~i~~~~p~n-ptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~  239 (343)
                      +++.+    ..+..+.++..|-. -.|.++ +.+.+++|.++|++||+++|+||+|.++.+.+.. .++..++....   
T Consensus       207 ~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~-~a~~~~~v~pD---  282 (451)
T PRK06918        207 FKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKY-FAIEHFDVVPD---  282 (451)
T ss_pred             HHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCce-ehhHhcCCCCC---
Confidence            33332    22445667777843 446644 5566999999999999999999999998776542 23333332222   


Q ss_pred             EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHH---HHHHHHHHH
Q 019298          240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMI---HGNFLENFA  315 (343)
Q Consensus       240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~---~~~~~~~~~  315 (343)
                      +.|+||.++ +|+|+||++++.        ++.+.+.... ..+++.+++.+.++ .+.|+    +++   ..+++++..
T Consensus       283 i~t~sK~l~-~G~pig~v~~~~--------~i~~~~~~~~~~~T~~g~~l~~aaa-~a~l~----~i~~~~~~~~~~~~g  348 (451)
T PRK06918        283 LITVSKSLG-AGVPISGVIGRK--------EIMDESAPGELGGTYAGSPLGCAAA-LAVLD----IIEKENLNDRAIELG  348 (451)
T ss_pred             EEeeehhhc-CCCccEEEEEcH--------HHHhccCCCCcCcCCCcCHHHHHHH-HHHHH----HHHHCCHHHHHHHHH
Confidence            448999987 899999999853        5777665432 34567888888886 44432    221   344444444


Q ss_pred             HHHHHhhcC----CCCceeeCCCCceEeee
Q 019298          316 GSCVPSYKL----IPELINFKSTGSSLKYL  341 (343)
Q Consensus       316 ~~~~~~L~~----~~g~~~~~~~~g~~~~~  341 (343)
                      +.+.+.|+.    +|.+..+.+.|+++.|.
T Consensus       349 ~~l~~~l~~l~~~~~~~~~vrg~G~~~~~~  378 (451)
T PRK06918        349 KVVMNRFEEMKNKYNCIGDVRGLGAMCAFE  378 (451)
T ss_pred             HHHHHHHHHHHhhCCCceeeccceeEEEEE
Confidence            554444433    33333346678888764

>PRK08360 4-aminobutyrate aminotransferase; Provisional

Probab=99.75  E-value=6.9e-16  Score=144.26  Aligned_cols=269  Identities=14%  Similarity=0.110  Sum_probs=161.6

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++.++|+..|.-.  ..++ .+|.+.+++++++.....  +.......+.+..+|+.+....  +..-+.+++++++++
T Consensus        39 dG~~ylD~~~g~~~--~~lGh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~la~~L~~~~--p~~~~~v~f~~sGsE  112 (443)
T PRK08360         39 EGNEYIDFLSDAAV--QNVGHNNPRVVKAIKEQTDKLIH--YTPIYGFPVEPLLLAEKLIEIA--PGDNPKVSFGLSGSD  112 (443)
T ss_pred             CCCEEEEccccHhh--cccCCCCHHHHHHHHHHHHhccC--ccccccCcHHHHHHHHHHHHhC--CCCCCEEEEcCCHHH
Confidence            38889999888533  2233 789999999999875321  2111122344455555554422  222368999999999


Q ss_pred             HHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHh-cCce------------eEEeecCCCC--CCC--------CCHHHH
Q 019298          112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAF-RHIE------------VRHFDLLPDK--GWE--------VDLDDI  166 (343)
Q Consensus       112 al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~-~g~~------------~~~~~~~~~~--~~~--------~d~~~l  166 (343)
                      |++.+++...  .....|+...-+|++....+.. .+..            +..++.....  .+.        -+++.+
T Consensus       113 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (443)
T PRK08360        113 ANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYI  192 (443)
T ss_pred             HHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHH
Confidence            9999998753  1235788877778765432222 2211            1222211100  000        123445


Q ss_pred             Hhhhc-----CCceEEEEeCC-CCCcccccC-HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEE
Q 019298          167 ESLAD-----QNTVALVIINP-GNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT  239 (343)
Q Consensus       167 ~~~~~-----~~~~~i~~~~p-~nptG~~~~-~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~  239 (343)
                      ++.+.     +++.+ ++..| +||+|.+++ .+.++++.++|++||+++|+||+|.++.+.+... ....++..++++ 
T Consensus       193 ~~~l~~~~~~~~iAA-vi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~-a~~~~~~~pDii-  269 (443)
T PRK08360        193 KEKFEGEVYAEGVAA-LFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWF-AIEHFGVEPDII-  269 (443)
T ss_pred             HHHHHhccCCCCeEE-EEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccch-hhhhcCCCCCEE-
Confidence            55553     23444 44557 699999887 5579999999999999999999999886655421 212222223333 


Q ss_pred             EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHH
Q 019298          240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSC  318 (343)
Q Consensus       240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~  318 (343)
                        ++||+++ +|+|+||++++        +++.+.+.... ..+.+.++..++++ .+.|+...+- +..++++++-+.+
T Consensus       270 --tlsK~l~-~G~pigav~~~--------~~i~~~~~~~~~~~T~~~~p~~~aaa-~a~l~~l~~~-~l~~~~~~~g~~l  336 (443)
T PRK08360        270 --TLGKPLG-GGLPISATIGR--------AEIMDSLPPLAHAFTLSGNPVASAAA-LAVIEEIEEK-NLLKRAEKLGNYT  336 (443)
T ss_pred             --Eeccccc-CCceeEEEEEc--------HHHHhhhcCCCCCCCCCcCHHHHHHH-HHHHHHHHHc-CHHHHHHHHHHHH
Confidence              6799988 89999999985        36777776442 33556778877777 4444321110 1445555555555


Q ss_pred             HHhhc
Q 019298          319 VPSYK  323 (343)
Q Consensus       319 ~~~L~  323 (343)
                      .+.|+
T Consensus       337 ~~~L~  341 (443)
T PRK08360        337 KKRLE  341 (443)
T ss_pred             HHHHH
Confidence            55443

>PLN02624 ornithine-delta-aminotransferase

Probab=99.74  E-value=3.5e-16  Score=147.59  Aligned_cols=243  Identities=16%  Similarity=0.086  Sum_probs=152.7

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC-CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNG-YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      +++++||..|.-.. +.--.+|.+.+++++++....... +-......+|.+.+++++        ..+.++++++++++
T Consensus        74 G~~ylD~~sg~~~~-~~Gh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~--------~~~~~~f~~SGseA  144 (474)
T PLN02624         74 GKKYLDFLSAYSAV-NQGHCHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMF--------GYDMVLPMNTGAEG  144 (474)
T ss_pred             CCEEEEcccchhcc-cCCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhc--------CCCeEEEeCChHHH
Confidence            77889998875331 112268999999999987632211 111123345556666554        24689999999999


Q ss_pred             HHHHHHHhcC---------CC-CeEEEeCCCCcchHHHHHhcCceeE-Ee---ecCCC---CCCCCCHHHHHhhhc---C
Q 019298          113 IDVAMALLSR---------PG-ANILLPRPGFPIYELSAAFRHIEVR-HF---DLLPD---KGWEVDLDDIESLAD---Q  172 (343)
Q Consensus       113 l~~~~~~l~~---------~g-d~vl~~~p~~~~~~~~~~~~g~~~~-~~---~~~~~---~~~~~d~~~l~~~~~---~  172 (343)
                      +..+++....         ++ .+|+...-+|.+....+.....+.. .-   +..+.   -.+ -|++.+++.++   +
T Consensus       145 ~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~~~~  223 (474)
T PLN02624        145 VETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-GDLDALEKIFEEDGD  223 (474)
T ss_pred             HHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-CCHHHHHHHHHhCCC
Confidence            9999975532         12 3577777788766443333221110 00   00000   000 26788888775   2


Q ss_pred             CceEEEEeCCCCCcccccCHH-HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCC
Q 019298          173 NTVALVIINPGNPCGNVYSYQ-HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG  251 (343)
Q Consensus       173 ~~~~i~~~~p~nptG~~~~~~-~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G  251 (343)
                      +..++++..++|++|.+++.+ .+++|.++|++||+++|+||+|.++...+... .....+.... +  .++||.++..+
T Consensus       224 ~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~-a~~~~~i~pD-i--v~lsK~lggG~  299 (474)
T PLN02624        224 RIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKML-ACDWEEVRPD-V--VILGKALGGGV  299 (474)
T ss_pred             CEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchh-hHHhcCCCCC-E--EEecccccCCC
Confidence            456677777799999998766 59999999999999999999999875554321 1111111122 2  23689999888


Q ss_pred             CcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccch
Q 019298          252 WRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLS  299 (343)
Q Consensus       252 ~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~  299 (343)
                      +++|+++++.        ++...+..... .+++.+++.++++ .+.|+
T Consensus       300 ~pigav~~~~--------~i~~~~~~~~~~~T~~g~pl~~aaa-~aaLe  339 (474)
T PLN02624        300 IPVSAVLADK--------DVMLCIKPGEHGSTFGGNPLASAVA-MAALQ  339 (474)
T ss_pred             CcceeeeecH--------HHHhHhccCCcCCCCCCCHHHHHHH-HHHHH
Confidence            9999999853        56665543332 2446778887777 44443

>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.74  E-value=8.4e-16  Score=138.55  Aligned_cols=221  Identities=19%  Similarity=0.138  Sum_probs=163.8

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH----HhcCceeEEee
Q 019298           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFD  152 (343)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~  152 (343)
                      +....|.++++++-        ..+..+.+++++.||..++..++++||+|++++..|++....+    +..|.++.+++
T Consensus        63 PT~~~lE~~~a~LE--------g~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d  134 (396)
T COG0626          63 PTRDALEEALAELE--------GGEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVD  134 (396)
T ss_pred             ccHHHHHHHHHHhh--------CCCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEEC
Confidence            34567888888776        4678999999999999999999999999999999998765544    45577777664


Q ss_pred             cCCCCCCCCCHHHHHhhhc-CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccccc
Q 019298          153 LLPDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF  231 (343)
Q Consensus       153 ~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~  231 (343)
                      .       -+.+++++++. +++++|++.+|.||+-.+   .++.+|+++++++|+++|+|+.+...++..+    + .+
T Consensus       135 ~-------~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v---~DI~~i~~~A~~~g~~vvVDNTfatP~~q~P----L-~~  199 (396)
T COG0626         135 P-------GDDEALEAAIKEPNTKLVFLETPSNPLLEV---PDIPAIARLAKAYGALVVVDNTFATPVLQRP----L-EL  199 (396)
T ss_pred             C-------CChHHHHHHhcccCceEEEEeCCCCccccc---ccHHHHHHHHHhcCCEEEEECCcccccccCh----h-hc
Confidence            2       24566676676 489999999999999888   7889999999999999999999987443211    1 12


Q ss_pred             CCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh--ccccCcchHHHHHHHhccchhhHHHHHHHH
Q 019298          232 GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF--DILGDPATFIQVCIMYGCLSTIMQIMIHGN  309 (343)
Q Consensus       232 ~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~  309 (343)
                         +-.|++.|.+|.+++.+-=+|-++..+      +.++.+.+....  ......+++..+.+..+ |   ..+--+.+
T Consensus       200 ---GaDIVvhSaTKyl~GHsDvl~G~v~~~------~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRG-l---kTL~~Rm~  266 (396)
T COG0626         200 ---GADIVVHSATKYLGGHSDVLGGVVLTP------NEELYELLFFAQRANTGAVLSPFDAWLLLRG-L---RTLALRME  266 (396)
T ss_pred             ---CCCEEEEeccccccCCcceeeeEEecC------hHHHHHHHHHHHHhhcCCCCCHHHHHHHHhc-c---chHHHHHH
Confidence               234999999999999886666655533      235666653332  23456677766555122 1   22223888


Q ss_pred             HHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          310 FLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       310 ~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      +..++...+.++|++.|.+. ++.|
T Consensus       267 ~~~~nA~~IA~~L~~~p~V~~V~yP  291 (396)
T COG0626         267 RHNENALKIAEFLADHPKVKKVYYP  291 (396)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEECC
Confidence            88899999999999988887 6666

>PRK13034 serine hydroxymethyltransferase; Reviewed

Probab=99.74  E-value=3.2e-15  Score=139.09  Aligned_cols=265  Identities=13%  Similarity=0.070  Sum_probs=162.1

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC--C----CCCCHHHHH----HHHHHHhhhCCCCCCCCcE
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA--P----TAGLPLTRR----AIAEYLSRDLPYKLTPNDV  103 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~--~----~~g~~~lr~----~ia~~~~~~~~~~~~~~~i  103 (343)
                      ..+.++|--.+.      ..+|.+++++...+.+....+|+  .    .....+|++    .++++++        .+..
T Consensus        27 ~~~~~~l~~sen------~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g--------~~~a   92 (416)
T PRK13034         27 QQDHLELIASEN------FTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFG--------CDYA   92 (416)
T ss_pred             HhcCeeeccccc------CCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhC--------CCce
Confidence            456677776662      35899999988885221111111  1    123456777    7777773        3455


Q ss_pred             -EEecChHHHHHHHHHHhcCCCCeEEEeCCCCcc-hHHHHHh--cCcee--EEeecCCCCCCCCCHHHHHhhhcC-CceE
Q 019298          104 -FVTSGCTQAIDVAMALLSRPGANILLPRPGFPI-YELSAAF--RHIEV--RHFDLLPDKGWEVDLDDIESLADQ-NTVA  176 (343)
Q Consensus       104 -~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~-~~~~~~~--~g~~~--~~~~~~~~~~~~~d~~~l~~~~~~-~~~~  176 (343)
                       +.+++++.|+..++.+++++||+|+++..+|.+ +...++.  .+...  ..++.++ .++.+|++++++.++. ++++
T Consensus        93 lv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~d~~~le~~l~~~~~kl  171 (416)
T PRK13034         93 NVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDR-LTGLIDYDEVEELAKEHKPKL  171 (416)
T ss_pred             EEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEccccc-ccCCcCHHHHHHHHhhcCCeE
Confidence             446788999999999999999999999999976 2222221  12112  2333322 2456899999988743 5677


Q ss_pred             EEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEE
Q 019298          177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW  256 (343)
Q Consensus       177 i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~  256 (343)
                      |++..+.  +|..   .++.+|.++|+++|+++|+|++++...+.....  ...+.  .-.++++|++|+++.+.  .|+
T Consensus       172 Vi~~~~~--~g~~---~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~--~~~~~--~~Di~~~s~~K~l~g~~--GG~  240 (416)
T PRK13034        172 IIAGFSA--YPRE---LDFARFREIADEVGALLMVDMAHIAGLVAAGEH--PNPFP--HAHVVTTTTHKTLRGPR--GGM  240 (416)
T ss_pred             EEECCCc--cccc---cCHHHHHHHHHHcCCEEEEeCcccccCcccCCC--CCCCC--CceEEEEeCcccCCCCC--CeE
Confidence            7665554  3555   467788888999999999999998755442211  11111  23489999999974332  377


Q ss_pred             EEEeCCCCCCCchHHHHHHhhhhccc--cCcchHHHHHHHhccchhh-HHHHHHHHHHHHHHHHHHHhhcCCCCceeeC
Q 019298          257 FVTTDPCGMFRKPKVVERMKKYFDIL--GDPATFIQVCIMYGCLSTI-MQIMIHGNFLENFAGSCVPSYKLIPELINFK  332 (343)
Q Consensus       257 i~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~a~~~~~l~~~-~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~  332 (343)
                      +++++       +.+...++......  ....+...+++..+++... .++.+.++++.++.+++.+.|.++ |+.+..
T Consensus       241 v~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~~  311 (416)
T PRK13034        241 ILTND-------EEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER-GYDLVS  311 (416)
T ss_pred             EEECc-------HHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CCEecc
Confidence            77643       23445555433211  1233333333322333221 122235789999999999999888 887643

>PRK06434 cystathionine gamma-lyase; Validated

Probab=99.73  E-value=8e-16  Score=140.60  Aligned_cols=218  Identities=12%  Similarity=0.027  Sum_probs=148.7

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchH----HHHHhcCceeEEee
Q 019298           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE----LSAAFRHIEVRHFD  152 (343)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~  152 (343)
                      +...+|++.++++.        ..+..+++++++.||..++.+++++||+|+++.+.|....    ..+...|.+++.++
T Consensus        64 P~~~~lE~~la~le--------g~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd  135 (384)
T PRK06434         64 PTVQAFEEKYAVLE--------NAEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYID  135 (384)
T ss_pred             hhHHHHHHHHHHHh--------CCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEEC
Confidence            34577888888887        3467788888899999999999999999999988776544    45566799999887


Q ss_pred             cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (343)
Q Consensus       153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~  232 (343)
                      .++.+.+.++        .+++++|++.+|.|||+.+   .++++|+++|++++  +++|.+++... .+.   ++.   
T Consensus       136 ~~~~~~~~l~--------~~~tklv~~e~~snpt~~v---~Di~~I~~la~~~~--lvVD~t~~s~~-~~~---pl~---  195 (384)
T PRK06434        136 TDRLNSLDFD--------PSNYDLIYAESITNPTLKV---PDIKNVSSFCHEND--VIVDATFASPY-NQN---PLD---  195 (384)
T ss_pred             CCChhheeec--------CCCeeEEEEEcCCCCCcee---ecHHHHHHHHHHcC--eEEECCCCCcc-cCC---chh---
Confidence            6543332222        1257899999999999988   67888899999998  46799975321 111   222   


Q ss_pred             CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHH
Q 019298          233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFL  311 (343)
Q Consensus       233 ~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~  311 (343)
                       .+-.++++|.+|.++.+|--+|-+++.+      ++++.++++... ......+++..+.+ ..-|+   .+-.+.++.
T Consensus       196 -~gaDivv~S~tK~i~G~~d~~gG~vv~~------~~~~~~~~~~~~~~~G~~~~~~~A~l~-~~gL~---tL~~R~~r~  264 (384)
T PRK06434        196 -LGADVVIHSATKYISGHSDVVMGVAGTN------NKSIFNNLVERRKTLGSNPDPIQAYLA-LRGLK---TLGLRMEKH  264 (384)
T ss_pred             -cCCCEEEeecccccCCCCCceEEEEecC------cHHHHHHHHHHHHhcCCCCCHHHHHHH-HhCCC---cHHHHHHHH
Confidence             1234999999999888664444444333      235666666543 22334455543333 33332   233366777


Q ss_pred             HHHHHHHHHhhcCCCCce-eeCC
Q 019298          312 ENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       312 ~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      +++...+.+.|+.+|.+. |+.|
T Consensus       265 ~~~a~~~a~~L~~~p~v~~V~yP  287 (384)
T PRK06434        265 NKNGMELARFLRDSKKISNVYYP  287 (384)
T ss_pred             HHHHHHHHHHHHcCCCccEEECC
Confidence            788888889999888776 5555

>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.73  E-value=1e-15  Score=136.30  Aligned_cols=216  Identities=20%  Similarity=0.112  Sum_probs=159.3

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh----cCceeEEeec
Q 019298           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----RHIEVRHFDL  153 (343)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~----~g~~~~~~~~  153 (343)
                      ....+.+.+++..        ...++++.+++..|+..++..|+..|+.++....+|......++.    .|.....+++
T Consensus        78 t~~~le~~iaal~--------ga~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~  149 (409)
T KOG0053|consen   78 TRDVLESGIAALE--------GAAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDV  149 (409)
T ss_pred             chHHHHHHHHHHh--------CCceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeech
Confidence            4467788888777        456799999999999999999999999999999999887665544    4666665543


Q ss_pred             CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (343)
Q Consensus       154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~  233 (343)
                      +       +++.+++++.+++++|++.+|.||+..+   .+++++.++|+++|+++++|+.++...+-  .+.   .++ 
T Consensus       150 ~-------~~~~~~~~i~~~t~~V~~ESPsNPll~v---~DI~~l~~la~~~g~~vvVDnTf~~p~~~--~pL---~lG-  213 (409)
T KOG0053|consen  150 D-------DLKKILKAIKENTKAVFLESPSNPLLKV---PDIEKLARLAHKYGFLVVVDNTFGSPYNQ--DPL---PLG-  213 (409)
T ss_pred             h-------hHHHHHHhhccCceEEEEECCCCCcccc---ccHHHHHHHHhhCCCEEEEeCCcCccccc--Chh---hcC-
Confidence            2       5788888999899999999999999999   67888888888999999999999875322  111   122 


Q ss_pred             CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHHHHHHHH
Q 019298          234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLE  312 (343)
Q Consensus       234 ~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~  312 (343)
                        -.|++.|.+|.++..+--+|-+++.+      .+++.++++..+. ..+..+++..... ..-|   ..+--+.++..
T Consensus       214 --ADIV~hSaTKyi~Ghsdvi~G~iv~n------~~~~~~~l~~~~~~lg~~~~p~~~~ll-~Rgl---ktl~lRi~~~~  281 (409)
T KOG0053|consen  214 --ADIVVHSATKYIGGHSDVIGGSVVLN------SEELASRLKFLQEDLGWCEDPFDLFLL-SRGL---KTLHLRINKHS  281 (409)
T ss_pred             --CCEEEEeeeeeecCCcceeeeEEecC------cHHHHHHHHHHHHHhcCCCCHHHHHHH-hcCc---chhhhhHHHHH
Confidence              33999999999999887777776654      2578888888764 3556677655555 1111   11111555556


Q ss_pred             HHHHHHHHhhcCCCCce
Q 019298          313 NFAGSCVPSYKLIPELI  329 (343)
Q Consensus       313 ~~~~~~~~~L~~~~g~~  329 (343)
                      ++.-.+.+.|+..|.++
T Consensus       282 ena~~~A~~Le~~~~v~  298 (409)
T KOG0053|consen  282 ENALKIALLLEAHPKVK  298 (409)
T ss_pred             HHHHHHHHHhhhCCcee
Confidence            66666667777665544

>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]

Probab=99.73  E-value=2.3e-16  Score=132.57  Aligned_cols=276  Identities=16%  Similarity=0.155  Sum_probs=179.7

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      -...+||.....     .-+..+++++|.++...+..  |+.......|++.+|+.+++       ...+++++|++..+
T Consensus        20 ~~~~vDLRSDTv-----T~PTdeMr~am~eA~vgDdV--yGeD~tt~rLE~~vA~l~GK-------EAgLFv~SGTmgNl   85 (384)
T KOG1368|consen   20 THRSVDLRSDTV-----TVPTDEMRRAMAEASVGDDV--YGEDPTTNRLEQRVAELFGK-------EAGLFVPSGTMGNL   85 (384)
T ss_pred             eeeccccccccc-----cCChHHHHHHHhhcccCccc--ccCCccHHHHHHHHHHHhCc-------cceeeecccccccH
Confidence            345567766652     34678999999998877655  55555678999999999952       34556666665555


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCc-chHH--HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC--------CceEEEEeCC
Q 019298          114 DVAMALLSRPGANILLPRPGFP-IYEL--SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--------NTVALVIINP  182 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~-~~~~--~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--------~~~~i~~~~p  182 (343)
                      -.+...+-++|..|++.+-+|- .|+.  .....|..+..+  .++++..+++++++++++.        .+++|++.|-
T Consensus        86 laIm~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv--~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT  163 (384)
T KOG1368|consen   86 LAIMVHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTV--KNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENT  163 (384)
T ss_pred             HHHHHHhcCCCceEEeccchheeehhccChhhhccceeEee--eeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeecc
Confidence            5544445569999999988883 3333  334445555544  5566778999999999872        4689999999


Q ss_pred             CCCcc-cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298          183 GNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (343)
Q Consensus       183 ~nptG-~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~  261 (343)
                      +|-+| .++|.|++.++.++|++||+.+..|.+-..-.--.... ++..+-.... -+--.+||.+|.|   +|.+++.+
T Consensus       164 ~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV-~vk~i~~~fD-SVsiCLSKglgAP---VGSViVG~  238 (384)
T KOG1368|consen  164 HNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGV-PVKKICSAFD-SVSICLSKGLGAP---VGSVIVGS  238 (384)
T ss_pred             ccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCC-CHHHHHHhhh-hhhhhhhccCCCC---cccEEEcc
Confidence            76665 99999999999999999999999998865422111111 1111111111 1223689998766   89988865


Q ss_pred             CCCCCCchHHHHHHhhhh---ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCC-CCce
Q 019298          262 PCGMFRKPKVVERMKKYF---DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKS-TGSS  337 (343)
Q Consensus       262 ~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~-~~g~  337 (343)
                             .+++++-+.++   ......+....+|+ ..+|+   +-....+.-.++...+.+.++..+++++..| ...+
T Consensus       239 -------k~FI~kA~~~RKalGGGmRQsGvLaaaa-Lval~---~~~~~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etN  307 (384)
T KOG1368|consen  239 -------KDFIDKARHFRKALGGGMRQSGVLAAAA-LVALD---ENVPLLRADHKRAKELAEYINTPEEIRVEVPAVETN  307 (384)
T ss_pred             -------HHHHHHHHHHHHHhcCchhHHHHHHHHH-HHHhh---cchHHHHHHHHHHHHHHHHhccccceeeecchhhcc
Confidence                   45777666554   22333344434444 22222   2233445555666677778888766886555 5566


Q ss_pred             Eeee
Q 019298          338 LKYL  341 (343)
Q Consensus       338 ~~~~  341 (343)
                      ++.+
T Consensus       308 iv~~  311 (384)
T KOG1368|consen  308 IVNM  311 (384)
T ss_pred             eeee
Confidence            6664

>PRK07495 4-aminobutyrate aminotransferase; Provisional

Probab=99.72  E-value=1.7e-15  Score=140.96  Aligned_cols=284  Identities=15%  Similarity=0.103  Sum_probs=170.3

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEecChH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVTSGCT  110 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~~~~g~~  110 (343)
                      +++.++|+..|.-..  .++ .+|.+.++++++++....  +.......+....+++.+....  +-. .+.++++++++
T Consensus        38 dG~~ylD~~~g~~~~--~lGh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~l~~~~--p~~~~~~v~f~~SGs  111 (425)
T PRK07495         38 EGRRYIDFAAGIAVV--NTGHRHPRVIAAVKAQLDRFTH--TCHQVVPYENYVRLAERLNALV--PGDFAKKTIFVTTGA  111 (425)
T ss_pred             CCCEEEEccccHHhh--ccCCCCHHHHHHHHHHHhhccC--cccCccCCHHHHHHHHHHHHhC--CCCCCCEEEECCchH
Confidence            388899998886432  133 789999999999875321  1110111233344455444322  111 26899999999


Q ss_pred             HHHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhc-Cc-------------eeEEeecCCCCCCCCC----HHHHHhhh
Q 019298          111 QAIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDKGWEVD----LDDIESLA  170 (343)
Q Consensus       111 ~al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~d----~~~l~~~~  170 (343)
                      +|++.+++...  ....+|+...-+|++....+... +.             ++..++.... ..+.+    ++.+++.+
T Consensus       112 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~l~~~~  190 (425)
T PRK07495        112 EAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVE-LHGVSVEQSLAALDKLF  190 (425)
T ss_pred             HHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcc-cccccHHHHHHHHHHHH
Confidence            99999988753  12357888888887764333221 11             1222222111 11122    44456655


Q ss_pred             c----CCceEEEEeCC-CCCcc-cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCc
Q 019298          171 D----QNTVALVIINP-GNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS  244 (343)
Q Consensus       171 ~----~~~~~i~~~~p-~nptG-~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~s  244 (343)
                      .    .+..+.++..| ..-+| ..++.+.+++|.++|++||+++|+||+|.++...+.. ...   ...+.+.-+.++|
T Consensus       191 ~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~-~a~---~~~gv~pDi~tls  266 (425)
T PRK07495        191 KADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKL-FAM---EHHEVAADLTTMA  266 (425)
T ss_pred             HhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCc-eee---cccCCCCCEEeeh
Confidence            3    23344555556 33378 4579999999999999999999999999987655542 111   2222334567899


Q ss_pred             cccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHH---HHHHHHHHHHHHHH
Q 019298          245 KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMI---HGNFLENFAGSCVP  320 (343)
Q Consensus       245 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~---~~~~~~~~~~~~~~  320 (343)
                      |.++ +|+++|+++++.        ++.+.+... ...+++.++++++++ .+.++    +++   ..++++++.+.+.+
T Consensus       267 K~l~-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa-~a~l~----~l~~~~l~~~~~~~g~~l~~  332 (425)
T PRK07495        267 KGLA-GGFPLAAVTGRA--------EIMDAPGPGGLGGTYGGNPLGIAAA-HAVLD----VIEEEDLCERANQLGNRLKQ  332 (425)
T ss_pred             hhhc-CCccceEEEEcH--------HHHhccCCCCcCCCCCCCHHHHHHH-HHHHH----HHHhchHHHHHHHHHHHHHH
Confidence            9976 789999999853        566665433 223567788888766 44432    222   45555555555555


Q ss_pred             hhcC----CCCce-eeCCCCceEeeecC
Q 019298          321 SYKL----IPELI-NFKSTGSSLKYLDL  343 (343)
Q Consensus       321 ~L~~----~~g~~-~~~~~~g~~~~~~l  343 (343)
                      .|+.    +|.+. +...  |+++|++|
T Consensus       333 ~L~~l~~~~~~i~~vrG~--Gl~~~iel  358 (425)
T PRK07495        333 RLASLRETVPEIADIRGP--GFMNAVEF  358 (425)
T ss_pred             HHHHHHhhCCCeeeeecC--ceEEEEEE
Confidence            5543    34333 3333  88888764

>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

Probab=99.70  E-value=3.2e-15  Score=129.68  Aligned_cols=222  Identities=17%  Similarity=0.119  Sum_probs=163.0

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH----HHHhcCceeEEee
Q 019298           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFD  152 (343)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~  152 (343)
                      +....|++.|+.+=+        .-.-+.+.+++.|+..++..+.++||.|+...--|++...    .++..|.++..++
T Consensus        62 PT~~vlE~RiAaLEG--------G~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd  133 (426)
T COG2873          62 PTTDVLEERIAALEG--------GVAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVD  133 (426)
T ss_pred             chHHHHHHHHHHhhc--------chhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeC
Confidence            346789999987752        2244566777999999999999999999999888876543    5577799998885


Q ss_pred             cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (343)
Q Consensus       153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~  232 (343)
                      .       -|++.+++++++++|+|++.+-.||.+.+   -++++++++|+++++++|+|..++.-+       -++.+ 
T Consensus       134 ~-------~d~~~~~~aI~~nTkavf~EtigNP~~~v---~Die~ia~iAh~~gvpliVDNT~atpy-------l~rP~-  195 (426)
T COG2873         134 P-------DDPENFEAAIDENTKAVFAETIGNPGLDV---LDIEAIAEIAHRHGVPLIVDNTFATPY-------LCRPI-  195 (426)
T ss_pred             C-------CCHHHHHHHhCcccceEEEEeccCCCccc---cCHHHHHHHHHHcCCcEEEecCCCcce-------ecchh-
Confidence            3       36899999999999999999999999999   567889999999999999999987521       11111 


Q ss_pred             CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCC-------------------------chHHHHHHh--hhhccccCc
Q 019298          233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR-------------------------KPKVVERMK--KYFDILGDP  285 (343)
Q Consensus       233 ~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~-------------------------~~~~~~~l~--~~~~~~~~~  285 (343)
                      +.+-.|+++|+||..|..|--+|-+++....+.|.                         ++.++-+.+  -+++.....
T Consensus       196 ~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~l  275 (426)
T COG2873         196 EHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATL  275 (426)
T ss_pred             hcCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhccccc
Confidence            12334999999999999999999999887776663                         111111111  123333444


Q ss_pred             chHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCce
Q 019298          286 ATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELI  329 (343)
Q Consensus       286 ~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~  329 (343)
                      +|+....+..+     -+-+. +.++..++...+.++|+.+|.+.
T Consensus       276 sPfnAfl~lqG-----lETL~LRmerH~~NA~~vA~~L~~HpkV~  315 (426)
T COG2873         276 SPFNAFLLLQG-----LETLSLRMERHCENALKVAEFLENHPKVA  315 (426)
T ss_pred             CcHHHHHHHhc-----hhhhHHHHHHHHHhHHHHHHHHhcCCCee
Confidence            55544444111     11222 88888999999999999988766

>TIGR01788 Glu-decarb-GAD glutamate decarboxylase

Probab=99.70  E-value=1.2e-14  Score=134.73  Aligned_cols=302  Identities=11%  Similarity=0.057  Sum_probs=189.6

Q ss_pred             ccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 019298            8 IDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIA   87 (343)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia   87 (343)
                      .++|.+..+.......+...... +......-++.=.      .++.|++.+.+...+..... ++.......++.+.+.
T Consensus        15 ~~~p~~~~~~~~~~~~~~~~iyl-d~~a~~~~~~~~t------t~~~p~~~~~~~~~l~~~~~-np~s~~~~~~le~~~~   86 (431)
T TIGR01788        15 YRMPEEEMPPDAAYQLIHDELSL-DGNPRLNLATFVT------TWMEPEARKLMDETINKNMI-DKDEYPQTAEIENRCV   86 (431)
T ss_pred             ccCCCCCCCHHHHHHHHHHHhhh-cCCcceeeeeeeC------CCCCHHHHHHHHHHHhcCCC-CcccCccHHHHHHHHH
Confidence            45666655666666666655432 1111122222211      34567788888888864322 2222233457777777


Q ss_pred             HHHhhhCCCCCCCCcEE--EecChHHHHHHHHHHhc--------CC-----CCeEEEeCCCCcchHHHHHhcCceeEEee
Q 019298           88 EYLSRDLPYKLTPNDVF--VTSGCTQAIDVAMALLS--------RP-----GANILLPRPGFPIYELSAAFRHIEVRHFD  152 (343)
Q Consensus        88 ~~~~~~~~~~~~~~~i~--~~~g~~~al~~~~~~l~--------~~-----gd~vl~~~p~~~~~~~~~~~~g~~~~~~~  152 (343)
                      +++.+.+|.+-..+++.  +|+|+|+++..++.+..        ..     ...|++..-.|.++...++..|++++.++
T Consensus        87 ~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~  166 (431)
T TIGR01788        87 NMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVP  166 (431)
T ss_pred             HHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEe
Confidence            88877666431113454  48999999998876542        11     13799999999999999999999999998


Q ss_pred             cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhc------CcEEEEccCCCcccc---CCC
Q 019298          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL------KTLVIADEVYGHLVF---GDK  223 (343)
Q Consensus       153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~------~~~~i~D~ay~~~~~---~~~  223 (343)
                      +++ +++.+|+++|++++++++.+|+++..+|.||.+   +++++|+++|+++      ++++++|.+|+++..   -++
T Consensus       167 ~d~-~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~i---dpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~  242 (431)
T TIGR01788       167 MDP-GRYVIDPEQVVEAVDENTIGVVCILGTTYTGEY---EDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPD  242 (431)
T ss_pred             cCC-CceeeCHHHHHHHHhhCCeEEEEEeCCCCCccc---CCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCC
Confidence            865 345799999999999889999999999999999   7788888999999      999999999996431   111


Q ss_pred             CCCcccccCCCCCEEEEccCcccc-CCCCCcEEEEEEeCCCCCCCchHHHHHHhhh---h-------ccccCcchHHHHH
Q 019298          224 PFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKKY---F-------DILGDPATFIQVC  292 (343)
Q Consensus       224 ~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~---~-------~~~~~~~~~~~~a  292 (343)
                      ....+.   ...-..+..|.+|.+ +..|  +|.+.+.++..      +...+...   .       ....+-+......
T Consensus       243 ~~~~~~---~~~~DSis~s~HK~~~~P~g--~G~l~~r~~~~------l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~  311 (431)
T TIGR01788       243 LEWDFR---LPRVKSINVSGHKYGLVYPG--VGWVIWRDEEA------LPEELIFHVNYLGGDEPTFTLNFSRPANQVIA  311 (431)
T ss_pred             chhhcC---CCCceEEEECchhccCCCCC--cEEEEEeChHH------cchhheecccccCCCCCCcceecCchHHHHHH
Confidence            111111   112235778999984 4444  78888865321      11221110   0       0011111111111


Q ss_pred             HHhccchh--hHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298          293 IMYGCLST--IMQIMIHGNFLENFAGSCVPSYKLIPELINFKS  333 (343)
Q Consensus       293 ~~~~~l~~--~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~  333 (343)
                      . ...|..  ...+.+..++..+..+++.+.|+++|++++..+
T Consensus       312 ~-w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~  353 (431)
T TIGR01788       312 Q-YYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISD  353 (431)
T ss_pred             H-HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeC
Confidence            1 111111  123333778888889999999999988986554

This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).

>TIGR01814 kynureninase kynureninase

Probab=99.70  E-value=1.2e-14  Score=135.36  Aligned_cols=194  Identities=15%  Similarity=0.103  Sum_probs=130.8

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCCCHHHHHHHH--HHHhhhCCCCCCCCcEEEecC
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE----KFNGYAPTAGLPLTRRAIA--EYLSRDLPYKLTPNDVFVTSG  108 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~~~g~~~lr~~ia--~~~~~~~~~~~~~~~i~~~~g  108 (343)
                      +..+.|+.+..    . +.++.+.+++.+.+...    ....+....+...+.+.+.  +++      +.++++|++++|
T Consensus        26 ~~~iyld~~a~----g-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------g~~~~~v~~~~~   94 (406)
T TIGR01814        26 NAVIYLDGNSL----G-LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLKLRLV------GAKEDEVVVMNT   94 (406)
T ss_pred             CCcEEecCCCc----C-cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcccccc------CCCCCcEEEeCC
Confidence            56799997772    2 34788888887766431    1111110011112222222  444      457899999999


Q ss_pred             hHHHHHHHHHHhcCCC---CeEEEeCCCCcchH----HHHHhcCcee----EEeecCCCCCCCCCHHHHHhhhc---CCc
Q 019298          109 CTQAIDVAMALLSRPG---ANILLPRPGFPIYE----LSAAFRHIEV----RHFDLLPDKGWEVDLDDIESLAD---QNT  174 (343)
Q Consensus       109 ~~~al~~~~~~l~~~g---d~vl~~~p~~~~~~----~~~~~~g~~~----~~~~~~~~~~~~~d~~~l~~~~~---~~~  174 (343)
                      ++++++.++.++.+++   +.|++....|+...    ..++..|.++    +.++.  ++++.+|++.+++.++   +++
T Consensus        95 ~t~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~--~~~g~~~~~~l~~~~~~~~~~t  172 (406)
T TIGR01814        95 LTINLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEP--REEETLRLEDILDTIEKNGDDI  172 (406)
T ss_pred             chHHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEecc--CCCCccCHHHHHHHHHhcCCCe
Confidence            9999999999886554   36888889998732    2345568776    33433  3345678899988774   578


Q ss_pred             eEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccC-CCC
Q 019298          175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI-VPG  251 (343)
Q Consensus       175 ~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G  251 (343)
                      +++++++++|.||...+   +++|+++|+++|+++++|++++...    .+..+.   ..+-.+++.|.+|.++ .+|
T Consensus       173 ~lv~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~G~----~~id~~---~~gvD~~~~s~hK~l~g~pG  240 (406)
T TIGR01814       173 AVILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHAVGN----VPLDLH---DWGVDFACWCTYKYLNAGPG  240 (406)
T ss_pred             EEEEEeccccccceecC---HHHHHHHHHHcCCEEEEEcccccCC----cccccc---cCCCCEEEEcCccccCCCCC
Confidence            89999999999999964   7888888999999999999998732    222222   2233489999999864 455

This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.

>PRK02769 histidine decarboxylase; Provisional

Probab=99.69  E-value=5.5e-14  Score=128.60  Aligned_cols=236  Identities=15%  Similarity=0.117  Sum_probs=158.3

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcE--EEecChHHHHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcCceeEEeecC
Q 019298           79 LPLTRRAIAEYLSRDLPYKLTPNDV--FVTSGCTQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLL  154 (343)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i--~~~~g~~~al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~  154 (343)
                      ..++.+.+.+++.+.+|.  +++++  ++|+|+|+++..++....  .++++|++++-.|.+....++..|.+...++..
T Consensus        63 ~~~~e~~~~~~~a~l~g~--~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~  140 (380)
T PRK02769         63 SFDFERDVMNFFAELFKI--PFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSL  140 (380)
T ss_pred             hHHHHHHHHHHHHHHhCC--CCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccC
Confidence            456666666666665554  33444  889999999877665432  467899999999999999999999988888875


Q ss_pred             CCCCCCCCHHHHHhhhcCC---ceEEEEeCCCCCcccccCHHHHHHHHHHHhhcC---cEEEEccCCCccccCC-CCCCc
Q 019298          155 PDKGWEVDLDDIESLADQN---TVALVIINPGNPCGNVYSYQHLQKLAETANKLK---TLVIADEVYGHLVFGD-KPFVP  227 (343)
Q Consensus       155 ~~~~~~~d~~~l~~~~~~~---~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~---~~~i~D~ay~~~~~~~-~~~~~  227 (343)
                      +  ++.+|+++|++.+++.   +.+|+++.++|+||.+   +++++|+++|+++|   +++++|.+|+.+...- .....
T Consensus       141 ~--~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~i---dpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~  215 (380)
T PRK02769        141 P--NGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAI---DNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPP  215 (380)
T ss_pred             C--CCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCccc---CCHHHHHHHHHHhCCCceEEEEEecccceeecccCcccc
Confidence            3  4569999999998765   8888889999999999   77888899999998   6999999999854321 11111


Q ss_pred             ccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh------h--ccccCcchHHHHHHHhccch
Q 019298          228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY------F--DILGDPATFIQVCIMYGCLS  299 (343)
Q Consensus       228 ~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~------~--~~~~~~~~~~~~a~~~~~l~  299 (343)
                      +. +.. +-..+..|.+|.++. -..+|.+...+        +...++...      .  ...++.+.....++ .++|.
T Consensus       216 ~d-~~~-~vDsis~s~HK~~~~-P~g~G~l~~r~--------~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~l-w~aL~  283 (380)
T PRK02769        216 FS-FAD-GIDSIAISGHKFIGS-PMPCGIVLAKK--------KYVERISVDVDYIGSRDQTISGSRNGHTALLL-WAAIR  283 (380)
T ss_pred             CC-ccC-CCCEEEECCcccCCC-CCCcEEEEEeh--------hhhhhcccCccccCCCCCCccCCCCcHHHHHH-HHHHH
Confidence            11 111 234778899998652 24478888864        233333111      0  11223333333333 33333


Q ss_pred             h--hHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCCC
Q 019298          300 T--IMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKST  334 (343)
Q Consensus       300 ~--~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~~  334 (343)
                      .  ...+.+..++..+..+++.+.|++. |++ +..|.
T Consensus       284 ~lg~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~  320 (380)
T PRK02769        284 SLGSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPN  320 (380)
T ss_pred             HHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCC
Confidence            1  1233337788888888888988876 777 44454

>PRK08117 4-aminobutyrate aminotransferase; Provisional

Probab=99.69  E-value=8.2e-15  Score=137.34  Aligned_cols=269  Identities=17%  Similarity=0.099  Sum_probs=159.6

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCC--CCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGY--APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y--~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~  109 (343)
                      ++++++|+..|.-..  .++ .+|.+.++++++++.......  .......+|.+.+++++      +-..+.+++++++
T Consensus        41 dG~~ylD~~~g~~~~--~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~------~~~~~~v~f~~SG  112 (433)
T PRK08117         41 DGKEYLDFTSGIAVA--NVGHRHPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEIT------PGGLDCFFFSNSG  112 (433)
T ss_pred             CCCEEEECCcchhhc--cCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhC------CCCCCEEEEeCcH
Confidence            378899998886332  233 789999999999875321110  11112234445554443      1234689999999


Q ss_pred             HHHHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHh-cCc--e-----------eEEeecCCCC--CCC--------CCH
Q 019298          110 TQAIDVAMALLS--RPGANILLPRPGFPIYELSAAF-RHI--E-----------VRHFDLLPDK--GWE--------VDL  163 (343)
Q Consensus       110 ~~al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~-~g~--~-----------~~~~~~~~~~--~~~--------~d~  163 (343)
                      ++|...+++...  ....+|+..+-+|++....+.. .+.  .           +..++.....  ...        -++
T Consensus       113 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (433)
T PRK08117        113 AEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECL  192 (433)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHH
Confidence            999999998642  1235788888888765443321 111  0           1111111000  000        145


Q ss_pred             HHHHhhhc----CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCE
Q 019298          164 DDIESLAD----QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI  237 (343)
Q Consensus       164 ~~l~~~~~----~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~  237 (343)
                      +.+++.+.    .+..+.++..| ....|.+ .+.+.++++.++|++||+++|+||+|.++...+.... ...++-.   
T Consensus       193 ~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~-~~~~gv~---  268 (433)
T PRK08117        193 RDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFA-AQTFGVV---  268 (433)
T ss_pred             HHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchh-HhhcCCC---
Confidence            55666553    23344555666 5666776 5788999999999999999999999998766554221 1112111   


Q ss_pred             EEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHH
Q 019298          238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAG  316 (343)
Q Consensus       238 i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~  316 (343)
                      .-+.++||.++ +|+++|+++++        +++.+.+.... ..+.+.++++++++ .+.|+...+ -...++++++.+
T Consensus       269 pDi~t~sK~lg-~G~pigav~~~--------~~i~~~~~~~~~~~T~~~np~~~aaa-~a~L~~l~~-~~l~~~~~~~g~  337 (433)
T PRK08117        269 PDIMTIAKGIA-SGLPLSAVVAS--------KELMEQWPLGSHGTTFGGNPVACAAA-LATLEVIKE-EKLLDNANEMGA  337 (433)
T ss_pred             CCEeehhhhcc-CCCcceeEEEc--------HHHHhhccCCCCCCCCCcCHHHHHHH-HHHHHHHHh-ccHHHHHHHHHH
Confidence            22468999987 79999999885        36766664332 23456788888777 555432100 014555555555


Q ss_pred             HHHHhhcC
Q 019298          317 SCVPSYKL  324 (343)
Q Consensus       317 ~~~~~L~~  324 (343)
                      .+.+.|+.
T Consensus       338 ~l~~~L~~  345 (433)
T PRK08117        338 YALERLEV  345 (433)
T ss_pred             HHHHHHHH
Confidence            55555543

>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases

Probab=99.69  E-value=4e-17  Score=143.38  Aligned_cols=260  Identities=13%  Similarity=0.119  Sum_probs=167.7

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCC
Q 019298           53 TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP  132 (343)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p  132 (343)
                      +.|++++++.++...+.  .|+......++++.+++++        ..+..+++++++.+..++++.+++|++.|++..+
T Consensus         7 ~~~~m~~a~~~a~~gd~--~Yg~D~~~~~l~~~i~~l~--------g~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~   76 (290)
T PF01212_consen    7 PTPAMLEAMAAANVGDD--AYGEDPTTARLEERIAELF--------GKEAALFVPSGTMANQLALRAHLRPGESVICADT   76 (290)
T ss_dssp             S-HHEEHHHHHTTSB-C--CTTSSHHHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHHHHTTEEEEEETT
T ss_pred             CCHHHHHHHHccccCCc--ccCCChhHHHHHHHHHHHc--------CCCEEEEeCCCChHHHHHHHHHHhcCCceecccc
Confidence            57889999966554433  5888878889999999999        4567789999999999999999999999999999


Q ss_pred             CCc---chHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCCC-cccccCHHHHHHHHHHH
Q 019298          133 GFP---IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNP-CGNVYSYQHLQKLAETA  202 (343)
Q Consensus       133 ~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~np-tG~~~~~~~l~~l~~~~  202 (343)
                      +|.   .........|.++..++..  ++..+++++|++.+..      .+++|++.+|+|. .|+++|.+++++|.++|
T Consensus        77 aHi~~~E~ga~~~~~G~~~~~l~~~--~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a  154 (290)
T PF01212_consen   77 AHIHFDETGAIEELSGAKLIPLPSD--DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELA  154 (290)
T ss_dssp             EHHHHSSTTHHHHHTTCEEEEEBEC--TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHH
T ss_pred             ceeeeeccchhhHhcCcEEEECCCc--ccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHH
Confidence            874   3334446688888888653  2267999999998854      4678899999886 59999999999999999


Q ss_pred             hhcCcEEEEccCCCcccc--CCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc
Q 019298          203 NKLKTLVIADEVYGHLVF--GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD  280 (343)
Q Consensus       203 ~~~~~~~i~D~ay~~~~~--~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~  280 (343)
                      ++||+.++.|.+-..-..  .+..+..+..+    -.++..|++|..++++   |.+++.+       ++++++.+....
T Consensus       155 ~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~----~D~v~~~~tK~~g~~~---Gavl~~~-------~~~i~~~~~~~k  220 (290)
T PF01212_consen  155 REHGLPLHMDGARLANAAAALGVSLAEIAAG----ADSVSFGGTKNGGAPG---GAVLAGN-------KEFIAKARRQRK  220 (290)
T ss_dssp             HHHT-EEEEEETTHHHHHCHHHHHHHHHHTT----SSEEEEETTSTT-SSS---EEEEEES-------HHHHHHHHHHHH
T ss_pred             HhCceEEEEehhhHHHhhhcccccHHHHhhh----CCEEEEEEEccccccc---ceEEEec-------hHHHHHHHHHHH
Confidence            999999999998543111  01111111111    1267778999977776   6666654       355444333321


Q ss_pred             -ccc--CcchHHHH--HHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEe
Q 019298          281 -ILG--DPATFIQV--CIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLK  339 (343)
Q Consensus       281 -~~~--~~~~~~~~--a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~  339 (343)
                       ...  ....+..+  ......+.....+.+...+-.++.+.+.+.|+.+ +..+..|..++-+
T Consensus       221 ~~gg~~~~~G~~~a~~~~~~~~l~~l~~~~~~~~~~~~~A~~La~~l~~~-~~~~~~~~~tn~~  283 (290)
T PF01212_consen  221 RLGGGMRQAGVLAAAELYQFAALRALELWLERARHANAMAKRLAAGLEAL-GGVLPRPVETNQV  283 (290)
T ss_dssp             HHTHHHHHTTHHHHHHHHHHHHHCHEECSHHHHHCHHHHHHCHHHCHHEE-CEEEETTSS-HHH
T ss_pred             HhccCeeecceeeeechhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCcEE
Confidence             100  00111111  0000111111344556677777788888899888 4454455544433

It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....

>PRK06058 4-aminobutyrate aminotransferase; Provisional

Probab=99.68  E-value=5.5e-14  Score=131.88  Aligned_cols=284  Identities=14%  Similarity=0.072  Sum_probs=170.1

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      ++.++|+..|.-.  ..++ .+|.+.+++++++.+..  .+.......+.+..+++.+...... ...+.+++++++++|
T Consensus        55 G~~ylD~~~g~~~--~~lGh~~p~v~~ai~~q~~~~~--~~~~~~~~~~~~~~la~~l~~~~p~-~~~~~v~f~~sGseA  129 (443)
T PRK06058         55 GNRLIDLGSGIAV--TSVGNSAPRVVEAVREQVARFT--HTCFMVTPYEGYVAVAEQLNRLTPG-DHEKRSALFNSGAEA  129 (443)
T ss_pred             CCEEEEcCcchhh--hccCCCCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCCC-CCCCEEEEeCCcHHH
Confidence            7888999877533  1233 78999999999987532  1222122345555666666543221 112588889888999


Q ss_pred             HHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcCc--------------eeEEeecCCC-CC---CCC--------CHH
Q 019298          113 IDVAMALLS--RPGANILLPRPGFPIYELSAAFRHI--------------EVRHFDLLPD-KG---WEV--------DLD  164 (343)
Q Consensus       113 l~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~-~~---~~~--------d~~  164 (343)
                      ++.+++...  ...++|+....+|+++...+.....              .+..++.... +.   ...        .++
T Consensus       130 ~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (443)
T PRK06058        130 VENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAIT  209 (443)
T ss_pred             HHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHH
Confidence            999988542  1237899999999887655443211              1111211100 00   000        122


Q ss_pred             HHHhhhcCCceEEEEeCCCCC-cccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEcc
Q 019298          165 DIESLADQNTVALVIINPGNP-CGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS  242 (343)
Q Consensus       165 ~l~~~~~~~~~~i~~~~p~np-tG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S  242 (343)
                      .+++.+..+..+.++..|.+. .|.. .+.+.+++|.++|++||+++|.||++.++...+... ....++-.++++   +
T Consensus       210 ~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~f-a~~~~gv~PDiv---~  285 (443)
T PRK06058        210 VIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWF-ACEHEGIVPDLI---T  285 (443)
T ss_pred             HHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhh-HHHhcCCCCCEE---E
Confidence            333443333445566777544 4554 468899999999999999999999999886555322 112222222333   3


Q ss_pred             CccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHH--HHHHHHHHHHHHH
Q 019298          243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLENFAGSCV  319 (343)
Q Consensus       243 ~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~~~~~~~~  319 (343)
                      ++|.++ .|+++|++++++        ++.+.+... ...+++.++++++++ .+.|+.   +.+  ..++++++.+.+.
T Consensus       286 ~gK~l~-~G~Pi~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa-~a~L~~---~~~~~l~~~~~~~g~~l~  352 (443)
T PRK06058        286 TAKGIA-GGLPLSAVTGRA--------EIMDAPHPGGLGGTYGGNPVACAAA-LAAIET---IEEDDLVARARQIEALMT  352 (443)
T ss_pred             Eccccc-CCCccEEEEEcH--------HHHhhccCCCCCCCCCCCHHHHHHH-HHHHHH---HHHcCHHHHHHHHHHHHH
Confidence            489987 789999999853        566666544 234667888888887 444432   212  5666777777777


Q ss_pred             HhhcCC----CCceeeCCCCceEe
Q 019298          320 PSYKLI----PELINFKSTGSSLK  339 (343)
Q Consensus       320 ~~L~~~----~g~~~~~~~~g~~~  339 (343)
                      +.|+++    +.+.-+.+.|.++.
T Consensus       353 ~~L~~l~~~~~~i~~vrg~G~~~~  376 (443)
T PRK06058        353 DRLRALAAEDDRIGDVRGRGAMIA  376 (443)
T ss_pred             HHHHHHHhhCCcEEeeeccceEEE
Confidence            777653    22222355665553

>PRK04311 selenocysteine synthase; Provisional

Probab=99.68  E-value=1.9e-14  Score=134.22  Aligned_cols=251  Identities=18%  Similarity=0.078  Sum_probs=160.9

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCC---CC--CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCC
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAPT---AG--LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA  125 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~---~g--~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd  125 (343)
                      .+.++++.+++.+.+.......|.-.   .|  ...+++.+++++        ..++.+++++++.++..++.++ .+||
T Consensus        96 s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~--------Gae~a~vv~sgtaAl~l~l~~l-~~Gd  166 (464)
T PRK04311         96 ALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALT--------GAEDALVVNNNAAAVLLALNAL-AAGK  166 (464)
T ss_pred             CCCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHh-CCCC
Confidence            34678999999888764321122211   11  257888888887        3456788888889999888665 7899


Q ss_pred             eEEEeCCCCcc------hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCC--cccccCHHHHHH
Q 019298          126 NILLPRPGFPI------YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP--CGNVYSYQHLQK  197 (343)
Q Consensus       126 ~vl~~~p~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~np--tG~~~~~~~l~~  197 (343)
                      +|++++..+..      +.......|++++.++...    ..++++++++++++++++++++++||  +|... .-++++
T Consensus       167 eVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~----~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~-~~dl~e  241 (464)
T PRK04311        167 EVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN----RTHLRDYEQAINENTALLLKVHTSNYRIEGFTK-EVSLAE  241 (464)
T ss_pred             EEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC----CCCHHHHHHhcCccCeEEEEEcCCCccccccCC-cCCHHH
Confidence            99998764432      2235567799988886532    24689999999999999999999998  45321 146889


Q ss_pred             HHHHHhhcCcEEEEccCCCccc----cCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298          198 LAETANKLKTLVIADEVYGHLV----FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (343)
Q Consensus       198 l~~~~~~~~~~~i~D~ay~~~~----~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  273 (343)
                      |+++|++||+++|+|.+.+.+.    ++-...+.+......+-.++++|.+|.++.+  ..|+++++        +++++
T Consensus       242 I~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp--~~G~i~g~--------~~li~  311 (464)
T PRK04311        242 LAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP--QAGIIVGK--------KELIA  311 (464)
T ss_pred             HHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCC--ceEEEEEc--------HHHHH
Confidence            9999999999999999754431    1100111122211223459999999997766  47888874        36777


Q ss_pred             HHhhhh-ccccCcchHHHHHHHhccch----hhHHHHH---------HHHHHHHHHHHHHHhhcCCC
Q 019298          274 RMKKYF-DILGDPATFIQVCIMYGCLS----TIMQIMI---------HGNFLENFAGSCVPSYKLIP  326 (343)
Q Consensus       274 ~l~~~~-~~~~~~~~~~~~a~~~~~l~----~~~~~l~---------~~~~~~~~~~~~~~~L~~~~  326 (343)
                      ++++.. .....+......+. .+.|.    ....+..         ..+++.++.+.+.+.|..++
T Consensus       312 ~l~~~~~~r~lr~dk~~l~~l-~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~  377 (464)
T PRK04311        312 RLKKHPLKRALRVDKLTLAAL-EATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAAL  377 (464)
T ss_pred             HHhhchhHHHHhcchHHHHHH-HHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhcc
Confidence            776421 11222333333333 22222    1111221         45777778888888887753

>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]

Probab=99.67  E-value=2.8e-15  Score=130.77  Aligned_cols=252  Identities=15%  Similarity=0.121  Sum_probs=174.5

Q ss_pred             CCCCCCcHHHHHHHHHHHhcCC------CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc
Q 019298           48 HSCFHTTHVATEAVAEALLSEK------FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS  121 (343)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~~~~~------~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~  121 (343)
                      |.+..-+|++++++.+.++..-      -+--+...-...|++.+|++.        ..+..++.+++--|....+..|.
T Consensus       181 YLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LH--------qK~aALlFsSCfVANDstLftLa  252 (570)
T KOG1360|consen  181 YLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLH--------QKEAALLFSSCFVANDSTLFTLA  252 (570)
T ss_pred             cccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHh--------cCcceeeeeeeeeccchHHHHHH
Confidence            4556789999999999987421      011111233468999999998        44666666666666666666664


Q ss_pred             --CCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC----CceEEEEeCCCCCcccccCHHHH
Q 019298          122 --RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----NTVALVIINPGNPCGNVYSYQHL  195 (343)
Q Consensus       122 --~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~i~~~~p~nptG~~~~~~~l  195 (343)
                        -||..++..+-.|.++....+..+..-..+..    +   |++.|++.+..    -|++|-+.+.+..+|.+   -.+
T Consensus       253 k~lpgcei~SD~gNHASMI~GIrns~v~K~IFrH----N---D~~hL~~lL~~~~~svPKivAFEtVhSM~Gav---cpl  322 (570)
T KOG1360|consen  253 KKLPGCEIFSDEGNHASMIQGIRNSRVPKHIFRH----N---DLDHLEQLLQSSPKSVPKIVAFETVHSMDGAV---CPL  322 (570)
T ss_pred             HHCCCcEEeccccchHHHHHHhhhcCCcceeecc----C---CHHHHHHHHHhCCCCCCceEEEeeeeccCCCc---CCH
Confidence              38999999999998888888888876655543    2   67888877643    57788899999999999   557


Q ss_pred             HHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCC-CEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298          196 QKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV-PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (343)
Q Consensus       196 ~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~-~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~  274 (343)
                      ++|++++++||.+-++||+++...|+.........-+-.. -.|+.+++.|+||.-|   ||+.++.        .+++-
T Consensus       323 eelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG---GYIAat~--------~LvDm  391 (570)
T KOG1360|consen  323 EELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG---GYIAATR--------KLVDM  391 (570)
T ss_pred             HHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccccc---ceehhhh--------hHHHH
Confidence            8889999999999999999998888765433211111111 2489999999999998   9998853        68888


Q ss_pred             Hhhhhc--c-ccCcchHHHHHHHhccchh--hHHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298          275 MKKYFD--I-LGDPATFIQVCIMYGCLST--IMQIMIHGNFLENFAGSCVPSYKLIPELIN  330 (343)
Q Consensus       275 l~~~~~--~-~~~~~~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~  330 (343)
                      ++.+..  + +.+.||....-+ ..+++-  ..+-...|+..+++..++.+.|.++ |+++
T Consensus       392 iRSyAaGFIFTTSLPP~vl~GA-leaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~-GiPV  450 (570)
T KOG1360|consen  392 IRSYAAGFIFTTSLPPMVLAGA-LEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL-GIPV  450 (570)
T ss_pred             HHHhcCceEEecCCChHHHHhH-HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc-CCcc
Confidence            887753  2 223344322222 222111  0111127777888888888888887 7875

>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []

Probab=99.67  E-value=2.7e-15  Score=136.36  Aligned_cols=231  Identities=15%  Similarity=0.141  Sum_probs=141.6

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCC
Q 019298           79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG  158 (343)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  158 (343)
                      ..+..+.+|+.|+       ..+..++++|+|.++..++.+++++||+|++++.||-+....+...|+..++++.. .+.
T Consensus        68 I~eAe~~aA~~fG-------Ad~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~-~~~  139 (417)
T PF01276_consen   68 IKEAEELAARAFG-------ADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPE-DNE  139 (417)
T ss_dssp             HHHHHHHHHHHHT-------ESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEE-E-T
T ss_pred             HHHHHHHHHHhcC-------CCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCC-ccc
Confidence            4677778888883       23466788999999999999999999999999999999999999999999998765 333


Q ss_pred             C----CCCH-----HHHHhhhcC--Cce---EEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCcc-ccCCC
Q 019298          159 W----EVDL-----DDIESLADQ--NTV---ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHL-VFGDK  223 (343)
Q Consensus       159 ~----~~d~-----~~l~~~~~~--~~~---~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~-~~~~~  223 (343)
                      +    .++.     +.++++++.  ..+   ++++++|+. .|++   -++++|+++|+++++.+++||||+.. .|. .
T Consensus       140 ~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~---~di~~I~~~~h~~~~~llvDEAhGah~~F~-~  214 (417)
T PF01276_consen  140 YGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVC---YDIKEIAEICHKHGIPLLVDEAHGAHFGFH-P  214 (417)
T ss_dssp             TS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEE---E-HHHHHHHHCCTECEEEEE-TT-TTGGCS-G
T ss_pred             cCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEE---ECHHHHHHHhcccCCEEEEEccccccccCC-C
Confidence            2    2455     888888864  233   488888765 6788   46788999999999999999999964 444 2


Q ss_pred             CCCcccccC----CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc--ccCcchHHHHHHHhcc
Q 019298          224 PFVPMGVFG----STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI--LGDPATFIQVCIMYGC  297 (343)
Q Consensus       224 ~~~~~~~~~----~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~a~~~~~  297 (343)
                      -+.+...+.    ....++++.|++|+  ++++.-+.++--+.....    -.++++.....  +.+|+-+..+.+ ..+
T Consensus       215 lp~~a~~~gad~~~~~~~~vvqS~HKt--L~altQts~lh~~~~~~v----~~~~~~~~l~~~~TTSPSY~lmASl-D~a  287 (417)
T PF01276_consen  215 LPRSALALGADRPNDPGIIVVQSTHKT--LPALTQTSMLHVKGDRIV----DHERVNEALSMHQTTSPSYPLMASL-DVA  287 (417)
T ss_dssp             GGTTCSSTTSS-CTSBEEEEEEEHHHH--SSS-TT-EEEEEETCCCT----THHHHHHHHHHHS-SS--HHHHHHH-HHH
T ss_pred             CccchhhccCccccccceeeeechhhc--ccccccceEEEecCCCcc----cHHHHHHHHHHHcCCChHHHHHHHH-HHH
Confidence            111111111    22357999999999  566666654443333211    12333333221  334444333333 221


Q ss_pred             chhhHHHH-H-----HHHHHHHHHHHHHHhh---cCCCCceeeCC
Q 019298          298 LSTIMQIM-I-----HGNFLENFAGSCVPSY---KLIPELINFKS  333 (343)
Q Consensus       298 l~~~~~~l-~-----~~~~~~~~~~~~~~~L---~~~~g~~~~~~  333 (343)
                          ..++ +     ..++..++...+++.+   ++++++.+..|
T Consensus       288 ----~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~  328 (417)
T PF01276_consen  288 ----RAQMEEEEGRELLEEAIELAEEFRKKINRLNDIWGFKVLGP  328 (417)
T ss_dssp             ----HHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-
T ss_pred             ----HHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEecCCc
Confidence                2233 1     4445555555566665   66666665444

One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.

>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]

Probab=99.67  E-value=5.2e-14  Score=130.95  Aligned_cols=268  Identities=16%  Similarity=0.096  Sum_probs=186.1

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC-----C--
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR-----P--  123 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~-----~--  123 (343)
                      ..+++...+.+...+..+.. ...-.++...+.+.+..++.+.++.+ ..-.-.+|+|+|+++..++.+...     .  
T Consensus        72 ~~~~~~a~~~~~~~~~~nl~-d~~~~p~a~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~  149 (460)
T COG0076          72 TRVPPVAAELLVSALNKNLG-DPDESPAAAELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRALA  149 (460)
T ss_pred             CCCHHHHHHHHHHHHhhcCC-CcccChhHHHHHHHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHHHHhhh
Confidence            34667778888888776422 22223367899999999999877755 223458899999999988777531     1  


Q ss_pred             -C------CeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceE--EEEeCCCCCcccccCHHH
Q 019298          124 -G------ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA--LVIINPGNPCGNVYSYQH  194 (343)
Q Consensus       124 -g------d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~--i~~~~p~nptG~~~~~~~  194 (343)
                       +      .+|+++.-.|.++...+..+|++...+++.+. ++.+|++++++++.+.+..  |+-+.+..+||.+   ++
T Consensus       150 ~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~i---Dd  225 (460)
T COG0076         150 ESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSI---DD  225 (460)
T ss_pred             cccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHhhccCceEEEEecCCCCCcc---CC
Confidence             1      16999999999999999999999999999875 7789999999999886665  7777889999999   99


Q ss_pred             HHHHHHHHhhcCcEEEEccCCCccccC-CCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298          195 LQKLAETANKLKTLVIADEVYGHLVFG-DKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (343)
Q Consensus       195 l~~l~~~~~~~~~~~i~D~ay~~~~~~-~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  273 (343)
                      +++|.++|+++++++++|.||+++... ......+ .+.-..-.=+..+++|. +..=..+||++..+++      .+.+
T Consensus       226 i~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~-~f~l~~vdSIt~d~HK~-g~aP~~~G~il~rd~e------~l~~  297 (460)
T COG0076         226 IEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRW-DFGLEGVDSITVDGHKY-GLAPIGCGVVLFRDEE------ALRR  297 (460)
T ss_pred             HHHHHHHHHHcCCcEEEEccccceeecccCccchh-hcCCCCceEEEECcccc-cCCCCCceEEEEECHH------Hhhh
Confidence            999999999999999999999997642 1111110 11111122456689999 6777889999998643      2444


Q ss_pred             HHhhhhc---------cccCcchH-HHHHHHhccchhh--HHHHHHHHHHHHHHHHHHHhhcCCCCceeeC
Q 019298          274 RMKKYFD---------ILGDPATF-IQVCIMYGCLSTI--MQIMIHGNFLENFAGSCVPSYKLIPELINFK  332 (343)
Q Consensus       274 ~l~~~~~---------~~~~~~~~-~~~a~~~~~l~~~--~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~  332 (343)
                      .+.....         .....+.. .+.+..++.+...  ..+.+..++..+..+.+.+.|++.+.+++..
T Consensus       298 ~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~  368 (460)
T COG0076         298 ILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVN  368 (460)
T ss_pred             hhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeec
Confidence            3332111         11111111 1333323333321  3344477777789999999999986688433

>PRK03715 argD acetylornithine transaminase protein; Provisional

Probab=99.65  E-value=4.3e-14  Score=130.59  Aligned_cols=269  Identities=16%  Similarity=0.046  Sum_probs=166.2

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      ++++++||..|.-+.+.++ .+|.+.+++++++..... .+.  ....+....+++++.+..    ..+.+++++++++|
T Consensus        34 dG~~~lD~~sg~~~~~lGh-~~p~v~~a~~~q~~~~~~-~~~--~~~~~~~~~la~~l~~~~----~~~~v~f~~SGseA  105 (395)
T PRK03715         34 NGKRYLDFIQGWAVNCLGH-CNPGMVEALAAQAEKLIN-PSP--AFYNEPMAKLAGLLTQHS----CFDKVFFANSGAEA  105 (395)
T ss_pred             CCCEEEECCcChhhccCCC-CCHHHHHHHHHHHHhccc-ccc--cccCHHHHHHHHHHhhcc----CCCEEEEeCCcHHH
Confidence            3789999998764422222 479999999998875321 121  234567888888886521    24689999999999


Q ss_pred             HHHHHHHhcC------CC-CeEEEeCCCCcchHHHHHh-cCceeEE---eecCCC--CCCCCCHHHHHhhhcCCceEEEE
Q 019298          113 IDVAMALLSR------PG-ANILLPRPGFPIYELSAAF-RHIEVRH---FDLLPD--KGWEVDLDDIESLADQNTVALVI  179 (343)
Q Consensus       113 l~~~~~~l~~------~g-d~vl~~~p~~~~~~~~~~~-~g~~~~~---~~~~~~--~~~~~d~~~l~~~~~~~~~~i~~  179 (343)
                      +..+++.+..      +| .+|+..+.+|++....+.. .+.....   .+..+.  .....|++.+++.+.+++.++++
T Consensus       106 ~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~  185 (395)
T PRK03715        106 NEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVML  185 (395)
T ss_pred             HHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCCceEEEE
Confidence            9999988741      23 5788888888765443333 2322110   111100  00013688999888766666666


Q ss_pred             eCCCCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEE
Q 019298          180 INPGNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV  258 (343)
Q Consensus       180 ~~p~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~  258 (343)
                      ...++..|... +.+.++++.++|++||+++|+||++.++...+... ....++-.+. |  .+++|.++. |..+|.++
T Consensus       186 Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~-a~~~~gv~PD-i--~t~gK~lg~-G~p~~av~  260 (395)
T PRK03715        186 EPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLF-AYELSGIEPD-I--MTLGKGIGG-GVPLAALL  260 (395)
T ss_pred             eCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchh-hHhhcCCCCc-e--eeehhhhhC-CcceEEEE
Confidence            65577778774 68999999999999999999999999865444421 1111121122 3  467899864 68999998


Q ss_pred             EeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC
Q 019298          259 TTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       259 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~  324 (343)
                      +++        ++..........+++.++.+.+++ .+.|+...+ -+.+++++++.+.+.+.|++
T Consensus       261 ~~~--------~i~~~~~~~~~~T~~g~pl~~aaa-la~L~~l~~-~~l~~~~~~~g~~l~~~L~~  316 (395)
T PRK03715        261 AKA--------EVAVFEAGDQGGTYNGNPLMTAVG-VAVISQLLA-PGFLEGVRARGEYLKEKLLE  316 (395)
T ss_pred             Ecc--------ccccccCCCcCCCCCCCHHHHHHH-HHHHHHHHh-ccHHHHHHHHHHHHHHHHHH
Confidence            854        332111111222445567666655 344322110 11666677777777776654

>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.65  E-value=1.1e-14  Score=129.43  Aligned_cols=266  Identities=17%  Similarity=0.163  Sum_probs=170.8

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~  109 (343)
                      +++.++||..|...  +.++ .+|.+.++++++.+.-  ..+.|..     +.+.++++.+.+..  + ..+.|++++++
T Consensus        40 ~G~~YlDf~~Giav--~~lGH~hP~iv~al~~Q~~kl~h~sn~~~~-----~~~~~la~~L~~~s--~-~~d~vff~NSG  109 (404)
T COG4992          40 QGREYLDFAAGIAV--NNLGHCHPALVEALKEQAEKLWHVSNLFYN-----EPQAELAEKLVELS--P-FADRVFFCNSG  109 (404)
T ss_pred             CCCEeeeeccceee--eccCCCCHHHHHHHHHHHHHhhhcccccCC-----hHHHHHHHHHHhhC--c-cccEEEEcCCc
Confidence            38899999888754  2244 8999999999988752  2223333     44555555554311  2 37899999999


Q ss_pred             HHHHHHHHHHhcC----C-CCeEEEeCCCCcchHHHHHhcCceeEEe----ecCCCCCCC--CCHHHHHhhhcCCceEEE
Q 019298          110 TQAIDVAMALLSR----P-GANILLPRPGFPIYELSAAFRHIEVRHF----DLLPDKGWE--VDLDDIESLADQNTVALV  178 (343)
Q Consensus       110 ~~al~~~~~~l~~----~-gd~vl~~~p~~~~~~~~~~~~g~~~~~~----~~~~~~~~~--~d~~~l~~~~~~~~~~i~  178 (343)
                      ++|++.+++...+    + ..+|+....+|++-.-.+...+.+.++.    |+.+.-.+.  =|++++++++++++.+|+
T Consensus       110 aEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~~~taAvi  189 (404)
T COG4992         110 AEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAIDEDTAAVI  189 (404)
T ss_pred             HHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHHHHhccCeEEEE
Confidence            9999999988632    2 2377777777765332222222221110    111110000  179999999999888888


Q ss_pred             EeCCCCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEE
Q 019298          179 IINPGNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF  257 (343)
Q Consensus       179 ~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i  257 (343)
                      +.--+.-.|+.. +.+.++++.++|++||+++|.||++.++...|+-+ ...-++-.++   |.++.|.+ ..|+.+|.+
T Consensus       190 vEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~f-A~e~~gV~PD---I~tlaK~L-gGG~PigA~  264 (404)
T COG4992         190 VEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLF-AYEHYGVEPD---ILTLAKAL-GGGFPIGAM  264 (404)
T ss_pred             EecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHH-HHHHhCCCCC---EEEeeccc-cCCccceee
Confidence            877788899884 56789999999999999999999999987666521 1111121122   33579995 466999999


Q ss_pred             EEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHH--HHHHHHHHHHHHHHhhcCC
Q 019298          258 VTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLENFAGSCVPSYKLI  325 (343)
Q Consensus       258 ~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~~~~~~~~~~L~~~  325 (343)
                      ++..        .+.+.+... +..++..+|++.+++ .+.|+   ...+  ..++.+++-+.+.+.|+++
T Consensus       265 la~~--------~~~~~~~~G~HgSTfGGNpLacAv~-~a~l~---~l~~e~ll~~v~~~g~~~~~~L~~l  323 (404)
T COG4992         265 LATE--------EIASAFTPGDHGSTFGGNPLACAVA-LAVLE---VLLEEGLLENVREKGEYLLQRLREL  323 (404)
T ss_pred             EEch--------hhhhcCCCCcccCCCCcCHHHHHHH-HHHHH---HHcchhHHHHHHHHHHHHHHHHHHH
Confidence            9842        233334333 234667788888777 44432   1111  5666666666666666653

>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.65  E-value=4.2e-14  Score=132.15  Aligned_cols=270  Identities=15%  Similarity=0.099  Sum_probs=160.7

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++.++||..|.-..  .++ .+|.+.+++++++.......+.  .-..+.+..+++.+.+..  +-..+++++++++++
T Consensus        40 dG~~ylD~~~g~~~~--~lGh~~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~~la~~l~~~~--p~~~~~v~f~~sGse  113 (423)
T PRK05964         40 DGRELIDAISSWWVA--THGHNHPYIDQAIREQLDRLDHVIFA--GFTHEPAERLAQRLVALT--PGGLDHVFFSDSGSV  113 (423)
T ss_pred             CCCEEEEcchhHHhc--cCCCCCHHHHHHHHHHHhhCCCcccc--ccCCHHHHHHHHHHHHhC--CCCCCEEEEeCCcHH
Confidence            388999998886332  233 6899999999998753211110  011234445555554322  212468999999999


Q ss_pred             HHHHHHHHhcC-------C-CCeEEEeCCCCcchHHHHHhcCce-------------eEEeecCCCCCCCCCHHHHHhhh
Q 019298          112 AIDVAMALLSR-------P-GANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPDKGWEVDLDDIESLA  170 (343)
Q Consensus       112 al~~~~~~l~~-------~-gd~vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~~~l~~~~  170 (343)
                      |++.+++....       + ..+|+...-+|++....+......             +..++....+....+++.+++.+
T Consensus       114 A~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l  193 (423)
T PRK05964        114 AVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALL  193 (423)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHH
Confidence            99999987531       2 357888888887755443332111             11222111010011277788777


Q ss_pred             cC--CceEEEEeCC--CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCcc
Q 019298          171 DQ--NTVALVIINP--GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK  245 (343)
Q Consensus       171 ~~--~~~~i~~~~p--~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK  245 (343)
                      ..  +..+.++..|  ++..|... +.+.+++|.++|++||+++|+||++.++...+... ....++....   +.+++|
T Consensus       194 ~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~-a~~~~~v~pD---i~~~~K  269 (423)
T PRK05964        194 EKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLF-ACEQAGVSPD---IMCLSK  269 (423)
T ss_pred             HhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchh-HHHhcCCCCC---eeeeeh
Confidence            42  2333444555  66778765 89999999999999999999999998875544321 1111221122   236789


Q ss_pred             ccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-------hccccCcchHHHHHHHhccchh--hHHHHHHHHHHHHHHH
Q 019298          246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-------FDILGDPATFIQVCIMYGCLST--IMQIMIHGNFLENFAG  316 (343)
Q Consensus       246 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~  316 (343)
                      .++..++++|+++++        +++.+.+...       ...++..++++.+++ .+.|+.  ...   ..+++++.-+
T Consensus       270 ~l~gG~~p~~av~~~--------~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa-~a~l~~l~~~~---~~~~~~~~g~  337 (423)
T PRK05964        270 GLTGGYLPLAATLCT--------AEIFEAFYSDDRAKAFMHSPSYTANPLACAAA-NASLDLFEDEP---VLERVAALSA  337 (423)
T ss_pred             hhhcCcccceEEEEc--------HHHHHhhhcCCcccccccCCCCCcCHHHHHHH-HHHHHHHHhcC---HHHHHHHHHH
Confidence            987666899998874        4677766431       112335677776666 444431  112   4455555555


Q ss_pred             HHHHhhcC
Q 019298          317 SCVPSYKL  324 (343)
Q Consensus       317 ~~~~~L~~  324 (343)
                      .+.+.|++
T Consensus       338 ~l~~~l~~  345 (423)
T PRK05964        338 GLAEGLEP  345 (423)
T ss_pred             HHHHHHHh
Confidence            55555544

>PRK13580 serine hydroxymethyltransferase; Provisional

Probab=99.65  E-value=1.1e-13  Score=128.05  Aligned_cols=281  Identities=15%  Similarity=0.080  Sum_probs=175.0

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC------CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP------TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~  107 (343)
                      ....|+|--.+      .-.++.+++++...+.+....+|+-      .....+++....+..++.||.  ..-+|-.-+
T Consensus        48 q~~~l~LiasE------N~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a--~~anvqp~S  119 (493)
T PRK13580         48 QRSSLKLIASE------NYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGA--EHAYVQPHS  119 (493)
T ss_pred             HhcCceEeccc------ccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCC--CcccccCCC
Confidence            45667776666      2467888888877776543333332      223345555555555555543  334555555


Q ss_pred             ChHHHHHHHHHHhcCC-------------------------------CCeEEEeCCCCcchHH---HHHhcC--ceeEEe
Q 019298          108 GCTQAIDVAMALLSRP-------------------------------GANILLPRPGFPIYEL---SAAFRH--IEVRHF  151 (343)
Q Consensus       108 g~~~al~~~~~~l~~~-------------------------------gd~vl~~~p~~~~~~~---~~~~~g--~~~~~~  151 (343)
                      | +.|...++.++++|                               ||+|+-.++..++...   .....+  ..+..+
T Consensus       120 g-~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y  198 (493)
T PRK13580        120 G-ADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSY  198 (493)
T ss_pred             c-HHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEec
Confidence            5 66777778888866                               7999988777644311   111122  455566


Q ss_pred             ecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCc-ccc
Q 019298          152 DLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGV  230 (343)
Q Consensus       152 ~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~-~~~  230 (343)
                      +++++ ...+|.+++++.+++.++.++++..+|-.+ ..   ++++|.++|+++|.++++|++|.....++..... ...
T Consensus       199 ~vd~~-~g~iD~d~l~~~~~~~~plvii~g~S~~~~-~~---dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~  273 (493)
T PRK13580        199 GVDPD-TGLLDYDEIAALAREFKPLILVAGYSAYPR-RV---NFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDP  273 (493)
T ss_pred             ccCcc-cCccCHHHHHHHHhhcCCEEEEeCccccCC-Cc---CHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCC
Confidence            66543 356999999999998888998888877644 53   5788888899999999999999987665332110 001


Q ss_pred             cCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhh--HHHHHH
Q 019298          231 FGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTI--MQIMIH  307 (343)
Q Consensus       231 ~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~--~~~l~~  307 (343)
                      ..  ...++++|++|++  .|.+.|+++++        +++++.+..... .++++.++..++. ..++...  .++-+.
T Consensus       274 ~~--~~D~vtgT~hKaL--~GP~GG~I~~~--------~~l~~~L~~a~P~i~gg~l~p~iAA~-avAl~e~~~~ef~~y  340 (493)
T PRK13580        274 VP--HADIVTTTTHKTL--RGPRGGLVLAK--------KEYADAVDKGCPLVLGGPLPHVMAAK-AVALAEARTPEFQKY  340 (493)
T ss_pred             CC--CCcEEEeCChhhc--cCCCeEEEEec--------HHHHHHHhhCCCcccCCCccHHHHHH-HHHHHHHhCccHHHH
Confidence            11  2338999999996  33445888885        367777743332 2333333333333 2223221  123337


Q ss_pred             HHHHHHHHHHHHHhhcCCCCceeeC-CCCceEeeec
Q 019298          308 GNFLENFAGSCVPSYKLIPELINFK-STGSSLKYLD  342 (343)
Q Consensus       308 ~~~~~~~~~~~~~~L~~~~g~~~~~-~~~g~~~~~~  342 (343)
                      ++++.++.+.+.+.|.+. |+.+.. ...+..++++
T Consensus       341 ~~~l~~Na~~La~~L~~~-G~~vv~ggTdshIV~V~  375 (493)
T PRK13580        341 AQQVVDNARALAEGFLKR-GARLVTGGTDNHLVLID  375 (493)
T ss_pred             HHHHHHHHHHHHHHHHhc-CCCccCCCCCCCEEEEE
Confidence            888999999999999887 787532 2334454443

>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated

Probab=99.65  E-value=1.3e-13  Score=128.82  Aligned_cols=289  Identities=18%  Similarity=0.127  Sum_probs=164.3

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcC-CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEE-ecC
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSE-KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFV-TSG  108 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~-~~g  108 (343)
                      +++.++||..|.-..  .++ .+|.+.+++++++... ..+..   ....+.+..+++.+.+....+-..+ .+++ +++
T Consensus        37 dG~~ylD~~~g~~~~--~lGh~~p~v~~ai~~ql~~~~~~~~~---~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~s  111 (425)
T PRK09264         37 DGKEYIDFFAGAGAL--NYGHNNPVLKQALIDYLQRDGITHGL---DMHTTAKREFLETFEETILKPRGLDYKVQFTGPT  111 (425)
T ss_pred             CCCEeeecccchhhc--cCCCCCHHHHHHHHHHHHhccccccc---ccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCC
Confidence            388899998886432  233 7899999999988742 11111   1112344455555543211111122 5655 579


Q ss_pred             hHHHHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhc-Cc------------eeEEeecCCCCCCC-CCHHHHHhhhcC
Q 019298          109 CTQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-HI------------EVRHFDLLPDKGWE-VDLDDIESLADQ  172 (343)
Q Consensus       109 ~~~al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~~~-~d~~~l~~~~~~  172 (343)
                      +++|++.+++...  ....+|+....+|++....+... +.            .+..++........ -|++.+++.+.+
T Consensus       112 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~  191 (425)
T PRK09264        112 GTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLED  191 (425)
T ss_pred             HHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHh
Confidence            9999999988763  12357888888887765433322 11            12222221100000 256778877742


Q ss_pred             -----CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCcc
Q 019298          173 -----NTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK  245 (343)
Q Consensus       173 -----~~~~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK  245 (343)
                           +..+.++..| ....|. .++.+.+++|.++|++||+++|+||++.++...+... ....++-.+++   .+++|
T Consensus       192 ~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~-~~~~~~v~PDi---~t~~K  267 (425)
T PRK09264        192 SSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFF-SFERAGITPDI---VTLSK  267 (425)
T ss_pred             ccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHH-HHhhcCCCCCE---EEecc
Confidence                 1234455555 566776 5788999999999999999999999999875544321 11112212232   36689


Q ss_pred             ccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHH---HHHHHHHHHHHHHHh
Q 019298          246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMI---HGNFLENFAGSCVPS  321 (343)
Q Consensus       246 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~---~~~~~~~~~~~~~~~  321 (343)
                      .++..|+++|++++++        ++ ..+... ...+++.++++.++. .+.+.   ++++   ..++++++.+.+.+.
T Consensus       268 ~l~~~G~pigav~~~~--------~i-~~~~~~~~~~T~~gnp~~~aaa-~a~l~---~~~~~~~l~~~~~~~g~~l~~~  334 (425)
T PRK09264        268 SISGYGLPMALVLIKP--------EL-DVWKPGEHNGTFRGNNLAFVTA-TAALE---EYWSDDAFEKEVKAKGELVRER  334 (425)
T ss_pred             ccCCCccceEEEEEch--------hh-hccCCCccCCCCCCCHHHHHHH-HHHHH---HHHhhhHHHHHHHHHHHHHHHH
Confidence            9887799999999964        33 233221 222445566665554 34432   1221   555666666666665


Q ss_pred             hcC----CCCceeeCCCCceEeeecC
Q 019298          322 YKL----IPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       322 L~~----~~g~~~~~~~~g~~~~~~l  343 (343)
                      |++    .|.+.......|+++|+.|
T Consensus       335 l~~l~~~~~~~~~~vrg~Gl~~~i~l  360 (425)
T PRK09264        335 LEEIAAKYPGLGAEVRGRGMMQGIDF  360 (425)
T ss_pred             HHHHHHhCCCceecceecccEEEEEe
Confidence            543    3322211233577777653

>PLN03032 serine decarboxylase; Provisional

Probab=99.65  E-value=3.7e-13  Score=122.42  Aligned_cols=263  Identities=14%  Similarity=0.063  Sum_probs=168.6

Q ss_pred             HHHHHHHHHHHhcC---CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcE--EEecChHHHHHHHHHHhc--CCCCeE
Q 019298           55 HVATEAVAEALLSE---KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDV--FVTSGCTQAIDVAMALLS--RPGANI  127 (343)
Q Consensus        55 ~~~~~~~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i--~~~~g~~~al~~~~~~l~--~~gd~v  127 (343)
                      ....+++...+.+.   ....+.......++.+.+.+++.+.+|  .+++++  ++|+|+|+++..++....  .++..|
T Consensus        37 ~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg--~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~v  114 (374)
T PLN03032         37 YGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWE--LEKDEYWGYITTCGTEGNLHGILVGREVFPDGIL  114 (374)
T ss_pred             hHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhC--CCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEE
Confidence            34566666665432   111121122346777777777766555  356666  999999999998877654  245689


Q ss_pred             EEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC---CceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298          128 LLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (343)
Q Consensus       128 l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~  204 (343)
                      +++.-.|.+....++..|.++..+++++  ++.+|+++|++++++   .+.+++++..+|+||.+   +++++|+++|++
T Consensus       115 i~s~~~H~Sv~kaa~~lg~~~~~V~~d~--~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~i---dpi~eI~~i~~~  189 (374)
T PLN03032        115 YASRESHYSVFKAARMYRMEAVKVPTLP--SGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAV---DDLDRILRILKE  189 (374)
T ss_pred             EeCCCceeHHHHHHHHcCCCCeEeeeCC--CCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccC---CCHHHHHHHHHH
Confidence            9999999999999999999988888754  457999999999976   46677777889999999   788899999999


Q ss_pred             cC-----cEEEEccCCCccccC-CCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh
Q 019298          205 LK-----TLVIADEVYGHLVFG-DKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY  278 (343)
Q Consensus       205 ~~-----~~~i~D~ay~~~~~~-~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~  278 (343)
                      +|     +++++|.+|+.+... ....+.+ .+.. .-..+..|.+|..+ .-..+|.++..+        +..+.+...
T Consensus       190 ~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~-~~~~-~vDSis~s~HK~~g-~P~g~G~ll~r~--------~~~~~~~~~  258 (374)
T PLN03032        190 LGYTEDRFYIHCDGALFGLMMPFVSRAPEV-TFRK-PIGSVSVSGHKFLG-CPMPCGVALTRK--------KHVKALSQN  258 (374)
T ss_pred             hCCCCCCeeEEEEccchhhhhhccCCCccc-CCCc-CCcEEEECcccccC-CCcCeEEEEEEc--------hhhHhhccC
Confidence            96     589999999875321 0000111 1111 12357779999855 334478888864        233333221


Q ss_pred             h--------ccccCcchHHHHHHHhccchh--hHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCCCCce
Q 019298          279 F--------DILGDPATFIQVCIMYGCLST--IMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKSTGSS  337 (343)
Q Consensus       279 ~--------~~~~~~~~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~~~g~  337 (343)
                      .        ...++-+......+ ...|..  ...+.+..++..++.+++.+.|++. ++. +..|....
T Consensus       259 ~~Yl~~~d~ti~gSR~g~~~l~~-w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p~~~~  326 (374)
T PLN03032        259 VEYLNSRDATIMGSRNGHAPLYL-WYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLNELSST  326 (374)
T ss_pred             CcccCCCCCcccCCCchHHHHHH-HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEECCCceE
Confidence            1        11122222222222 222221  1344447777888888888888886 666 45555443

>TIGR00474 selA seryl-tRNA(sec) selenium transferase

Probab=99.64  E-value=9.9e-14  Score=129.16  Aligned_cols=251  Identities=17%  Similarity=0.065  Sum_probs=155.8

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCC---CC--CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCC
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAPT---AG--LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA  125 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~---~g--~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd  125 (343)
                      .+.++.+.+++.+.+.......|.-.   .|  ...+++.++++++        .+..+++++++.++..++.. +.+||
T Consensus        91 s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~g--------ae~alvv~sg~aAi~l~l~~-l~~Gd  161 (454)
T TIGR00474        91 APLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTG--------AEDALVVNNNAAAVLLALNT-LAKGK  161 (454)
T ss_pred             CCCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHH-hCCcC
Confidence            34678999999888764211122211   11  2678888888883        34466777888899888855 57999


Q ss_pred             eEEEeCCCCcc------hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCc--ccccCHHHHHH
Q 019298          126 NILLPRPGFPI------YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC--GNVYSYQHLQK  197 (343)
Q Consensus       126 ~vl~~~p~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~npt--G~~~~~~~l~~  197 (343)
                      +|++.+..|..      +.......|++++.++...    ..++++++++++++++++++.+++|++  |.. ...++++
T Consensus       162 eVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~----~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~-~~~dl~~  236 (454)
T TIGR00474       162 EVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN----RTHLKDYEDAITENTALLLKVHTSNYRIVGFT-EEVSIAE  236 (454)
T ss_pred             EEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC----CCCHHHHHHhcCcCCEEEEEEccCcccccCCC-CCCCHHH
Confidence            99999876432      2335566799988886531    247899999999999999999999985  531 1146888


Q ss_pred             HHHHHhhcCcEEEEccCCCccccCC----CCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298          198 LAETANKLKTLVIADEVYGHLVFGD----KPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (343)
Q Consensus       198 l~~~~~~~~~~~i~D~ay~~~~~~~----~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  273 (343)
                      |+++|+++|+++++|.+.+.+.-.+    ...+.+......+-.++++|.+|.++.+  ..|++++++        ++++
T Consensus       237 I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp--~~G~i~g~~--------~~i~  306 (454)
T TIGR00474       237 LVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP--QAGIIVGKK--------ELIE  306 (454)
T ss_pred             HHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCC--eEEEEEECH--------HHHH
Confidence            9999999999999998754431100    0111111122223349999999997766  478888753        5665


Q ss_pred             HHhhhhc-cccCcchHHHHHH---HhccchhhHHHHH---------HHHHHHHHHHHHHHhhcCC
Q 019298          274 RMKKYFD-ILGDPATFIQVCI---MYGCLSTIMQIMI---------HGNFLENFAGSCVPSYKLI  325 (343)
Q Consensus       274 ~l~~~~~-~~~~~~~~~~~a~---~~~~l~~~~~~l~---------~~~~~~~~~~~~~~~L~~~  325 (343)
                      ++++..- ....+.....++.   ....+.....|..         ..+++.++...+.+.|+..
T Consensus       307 ~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~  371 (454)
T TIGR00474       307 RLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAA  371 (454)
T ss_pred             hhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhh
Confidence            5543210 0112222222222   0111111112222         5567777888888888764

In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.

>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]

Probab=99.63  E-value=1.3e-13  Score=123.63  Aligned_cols=256  Identities=17%  Similarity=0.178  Sum_probs=170.7

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEe
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP  130 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~  130 (343)
                      ...++.++++|.+...    +...+  ....+-+.+.+.++..++.. +.+-++++.+++.+++.++.++++|||+|++.
T Consensus        14 ~~v~~~V~~am~~~~~----~h~s~--~F~~~~~~~~~~L~~v~~t~-~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~   86 (383)
T COG0075          14 VPVPPRVLLAMARPMV----GHRSP--DFVGIMKEVLEKLRKVFGTE-NGDVVLLSGSGTLAMEAAVASLVEPGDKVLVV   86 (383)
T ss_pred             CCCCHHHHHHhcCCCC----CCCCH--HHHHHHHHHHHHHHHHhcCC-CCcEEEEcCCcHHHHHHHHHhccCCCCeEEEE
Confidence            5577888887766432    22333  12233333333333333321 23556677889999999999999999999999


Q ss_pred             CCCCcc--hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC--CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcC
Q 019298          131 RPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--NTVALVIINPGNPCGNVYSYQHLQKLAETANKLK  206 (343)
Q Consensus       131 ~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~  206 (343)
                      ..+..+  +...++.+|.+++.+...  .+-.+|+++++++++.  +.+++.+++.-.+||+.   .++++|+++|++||
T Consensus        87 ~nG~FG~R~~~ia~~~g~~v~~~~~~--wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvl---npl~~I~~~~k~~g  161 (383)
T COG0075          87 VNGKFGERFAEIAERYGAEVVVLEVE--WGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVL---NPLKEIAKAAKEHG  161 (383)
T ss_pred             eCChHHHHHHHHHHHhCCceEEEeCC--CCCCCCHHHHHHHHhcCCCccEEEEEeccCccccc---CcHHHHHHHHHHcC
Confidence            888754  566889999999988765  5567999999999984  46678888888999999   67899999999999


Q ss_pred             cEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCC-CCCcEEEEEEeCCCC-----------CCCc-hHHHH
Q 019298          207 TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCG-----------MFRK-PKVVE  273 (343)
Q Consensus       207 ~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~i~~~~~~~-----------~~~~-~~~~~  273 (343)
                      .++|+|.+-+..   +. ...+..+.   -.+++.+-.|.+++ ||  +|.+..++++.           .. | ..+.+
T Consensus       162 ~l~iVDaVsS~G---g~-~~~vd~wg---iDv~itgSQK~l~~PPG--la~v~~S~~a~e~~~~~~~~~~yl-DL~~~~~  231 (383)
T COG0075         162 ALLIVDAVSSLG---GE-PLKVDEWG---IDVAITGSQKALGAPPG--LAFVAVSERALEAIEERKHPSFYL-DLKKWLK  231 (383)
T ss_pred             CEEEEEecccCC---Cc-ccchhhcC---ccEEEecCchhccCCCc--cceeEECHHHHHHHhcCCCCceee-cHHHHHH
Confidence            999999997752   22 22333333   34888889999887 66  67777765320           00 0 01111


Q ss_pred             HHhhhhccccCcchHHHHHHHhccchhh-HHHHH-HHHHHHHHHHHHHHhhcCCCCcee
Q 019298          274 RMKKYFDILGDPATFIQVCIMYGCLSTI-MQIMI-HGNFLENFAGSCVPSYKLIPELIN  330 (343)
Q Consensus       274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~-~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~  330 (343)
                      .+++. ..+..+++.....+...+|+.. .+=++ +.++++++.+.+++.++.+ |++.
T Consensus       232 ~~~~~-~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~  288 (383)
T COG0075         232 YMEKK-GSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLEL  288 (383)
T ss_pred             HHhhc-CCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCcc
Confidence            22111 1233444444433335555432 22233 8999999999999999988 7774

>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase

Probab=99.63  E-value=2.5e-13  Score=126.22  Aligned_cols=289  Identities=16%  Similarity=0.097  Sum_probs=163.5

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcC-CCCCCCCCCCCHHHHHHHHHHHhhhCCCCC-CCCcEEE-ecC
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSE-KFNGYAPTAGLPLTRRAIAEYLSRDLPYKL-TPNDVFV-TSG  108 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~-~~~~i~~-~~g  108 (343)
                      +++.++|+..|.-..  .++ .+|.+.+++++++.+. ....   .....+.+..+++.+.+....+- ..+.+++ +++
T Consensus        33 dG~~ylD~~~g~~~~--~lGh~~p~v~~ai~~ql~~~~~~~~---~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~s  107 (412)
T TIGR02407        33 DGKEYIDFFAGAGAL--NYGHNNPKLKQALIDYLADDGIIHS---LDMATEAKREFLETFNEIILKPRGLDYKVQFPGPT  107 (412)
T ss_pred             CCCEEEEcccchhhc--cCCCCCHHHHHHHHHHHhhccceec---cccCcHHHHHHHHHHHHhccCccCCCceEEEeCCC
Confidence            388999998886432  233 7899999999998742 1111   11123444555555543210011 1125655 588


Q ss_pred             hHHHHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhc-Cc------------eeEEeecCCCCCC-CCCHHHHHhhhcC
Q 019298          109 CTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFR-HI------------EVRHFDLLPDKGW-EVDLDDIESLADQ  172 (343)
Q Consensus       109 ~~~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~~-~~d~~~l~~~~~~  172 (343)
                      ++++++.+++....  ...+|+..+-+|++....+... +.            .+..++....... .-+++.+++.+.+
T Consensus       108 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~  187 (412)
T TIGR02407       108 GTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLED  187 (412)
T ss_pred             chHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHh
Confidence            99999999987642  2367888888887765444332 21            1122221100000 0136667777742


Q ss_pred             -----CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCcc
Q 019298          173 -----NTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK  245 (343)
Q Consensus       173 -----~~~~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK  245 (343)
                           +..+.++.-| .++.|. ..+.+.+++|.++|++||+++|+||++.++...+... ....++-.+. ++  +++|
T Consensus       188 ~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~-a~~~~~v~PD-i~--~~~K  263 (412)
T TIGR02407       188 SSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFF-SFEPAGIEPD-IV--CLSK  263 (412)
T ss_pred             ccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhH-HhcccCCCCC-EE--Eech
Confidence                 1223444555 788898 5789999999999999999999999999775444321 1111111122 33  5789


Q ss_pred             ccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHH---HHHHHHHHHHHHHHh
Q 019298          246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMI---HGNFLENFAGSCVPS  321 (343)
Q Consensus       246 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~---~~~~~~~~~~~~~~~  321 (343)
                      .++..|+++|++++++        ++ ..+... ...+++.++++.+++ .+.++   .+++   ..+++++..+.+.+.
T Consensus       264 ~lg~~G~pigav~~~~--------~~-~~~~~~~~~~T~~gnpl~~aaa-~a~l~---~~i~~~~l~~~~~~~g~~l~~~  330 (412)
T TIGR02407       264 SISGYGLPLALTLIKP--------EL-DVWKPGEHNGTFRGNNLAFVTA-TAALE---YYWSDDAFEKAVQRKSEIIQER  330 (412)
T ss_pred             hccCCccceeEEEEch--------hh-hccCCCccCCCCCccHHHHHHH-HHHHH---HHhcccHHHHHHHHHHHHHHHH
Confidence            9765599999999953        22 322212 222445666655443 23222   1222   344444444444444


Q ss_pred             hc----CCCCceeeCCCCceEeeecC
Q 019298          322 YK----LIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       322 L~----~~~g~~~~~~~~g~~~~~~l  343 (343)
                      |+    .+|++....+..|+++|+.|
T Consensus       331 l~~l~~~~~~~~~~vrg~Gl~~~l~l  356 (412)
T TIGR02407       331 LDRIVAEYPELIKQVRGRGLMQGIEC  356 (412)
T ss_pred             HHHHHhhCCCceEeeecceeEEEEEe
Confidence            43    34433333455688888864

Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.

>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases

Probab=99.62  E-value=1.4e-13  Score=129.03  Aligned_cols=267  Identities=13%  Similarity=0.071  Sum_probs=157.6

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCc-EEEecCh
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEK-FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPND-VFVTSGC  109 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~-i~~~~g~  109 (343)
                      ++++++|+..|.-..  .++ .+|.+.+++++++.... .+..   ....+.+..+|+.+............ ++.++++
T Consensus        37 dG~~ylD~~~g~~~~--~lGh~~p~i~~ai~~q~~~~~~~~~~---~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sG  111 (442)
T TIGR00709        37 EGKEYLDFLAGAGTL--ALGHNHPNMKQKILDYLQSGLPLHTL---DLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSG  111 (442)
T ss_pred             CCCEEEEccccHhhh--cCCCCCHHHHHHHHHHHHhccCcccc---ccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCH
Confidence            388999998886432  233 78999999999987532 1110   01224555555655442221101134 4556899


Q ss_pred             HHHHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCCCCCCCC--------CH---
Q 019298          110 TQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGWEV--------DL---  163 (343)
Q Consensus       110 ~~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~--------d~---  163 (343)
                      ++|.+.+++....  ...+|+...-+|++....+.....             .+..++..  +.+..        +.   
T Consensus       112 sEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  189 (442)
T TIGR00709       112 ADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYP--HEYRCPFGIGGEAGSNAS  189 (442)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCC--ccccccccCCchhHHHHH
Confidence            9999999887531  235788888888877654443211             11222211  11111        11   


Q ss_pred             -HHHHhhhc------CCceEEEEeCCC-CCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCC
Q 019298          164 -DDIESLAD------QNTVALVIINPG-NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV  235 (343)
Q Consensus       164 -~~l~~~~~------~~~~~i~~~~p~-nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~  235 (343)
                       +.+++.+.      ++..++++.... |+.....+++.++++.++|++||+++|.||++.+|...+. ......++-.+
T Consensus       190 ~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~-~~a~~~~gv~P  268 (442)
T TIGR00709       190 IEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGT-MFAFEHAGIEP  268 (442)
T ss_pred             HHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCc-hhHHHHcCCCC
Confidence             12333332      234444544334 4544558999999999999999999999999999876553 22222233222


Q ss_pred             CEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh-hhccccCcchHHHHHHHhccchhhHHHHH--HHHHHH
Q 019298          236 PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK-YFDILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLE  312 (343)
Q Consensus       236 ~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~  312 (343)
                      . |++  ++|.++. |+++|++++++        + .+.+.. ....+++.++++++++ .+.|+.   +.+  ..++++
T Consensus       269 D-iv~--~gK~l~~-G~Pigav~~~~--------~-~~~~~~~~~~~T~~gnpla~aaa-~a~L~~---i~~~~l~~~~~  331 (442)
T TIGR00709       269 D-FVV--MSKAVGG-GLPLAVLLIAP--------E-FDAWQPAGHTGTFRGNQLAMVTG-TEALNY---WKDDNLAQNAQ  331 (442)
T ss_pred             c-EEE--EcccccC-CcccEEEEEch--------H-HhccCCCcCCCCCCcCHHHHHHH-HHHHHH---HHhcCHHHHHH
Confidence            3 434  7999876 89999999853        3 232221 2233567788888888 555432   112  556666


Q ss_pred             HHHHHHHHhhcC
Q 019298          313 NFAGSCVPSYKL  324 (343)
Q Consensus       313 ~~~~~~~~~L~~  324 (343)
                      ++.+.+.+.|++
T Consensus       332 ~~g~~l~~~L~~  343 (442)
T TIGR00709       332 ERGERITSFLDD  343 (442)
T ss_pred             HHHHHHHHHHHH
Confidence            666766666654

This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.

>PRK06541 hypothetical protein; Provisional

Probab=99.62  E-value=3e-13  Score=127.11  Aligned_cols=269  Identities=17%  Similarity=0.114  Sum_probs=163.2

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      ++.++|+..|.-..  .++ .+|.+.+++++++.....  +.......+.+..+++.+.+..  +-..+.+++++++++|
T Consensus        51 G~~ylD~~~g~~~~--~lGh~~p~v~~Av~~q~~~~~~--~~~~~~~~~~~~~la~~l~~~~--p~~~~~v~f~~sGseA  124 (460)
T PRK06541         51 GKRYLDGLAGLFVV--QVGHGRAELAEAAAKQAGTLAF--FPLWSYAHPPAIELAERLAALA--PGDLNRVFFTTGGSEA  124 (460)
T ss_pred             CCEEEECCccHHhc--cCCCCCHHHHHHHHHHHhhCcC--ccccccCCHHHHHHHHHHHHhC--CCCcCEEEEcCCcHHH
Confidence            88999998885331  233 689999999999875321  1111111233444555544321  1224689999999999


Q ss_pred             HHHHHHHhcC--------CCCeEEEeCCCCcchHHHHHhc-Cc------------eeEEeecCCCCC---CCCC------
Q 019298          113 IDVAMALLSR--------PGANILLPRPGFPIYELSAAFR-HI------------EVRHFDLLPDKG---WEVD------  162 (343)
Q Consensus       113 l~~~~~~l~~--------~gd~vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~---~~~d------  162 (343)
                      ++.+++....        ...+|+...-+|++....+... |.            .+..++......   +.-+      
T Consensus       125 ve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  204 (460)
T PRK06541        125 VESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGR  204 (460)
T ss_pred             HHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHH
Confidence            9999886531        1367888888887765433322 11            111121110000   1111      


Q ss_pred             --HHHHHhhhc---CCceEEEEeCC-CCCcccccC-HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCC
Q 019298          163 --LDDIESLAD---QNTVALVIINP-GNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV  235 (343)
Q Consensus       163 --~~~l~~~~~---~~~~~i~~~~p-~nptG~~~~-~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~  235 (343)
                        ++.+++.+.   .+..+.++..| +++.|.+.+ .+.+++|.++|++||+++|+||++.++...+... ....++-.+
T Consensus       205 ~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~-a~~~~gv~P  283 (460)
T PRK06541        205 WAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMF-GCERFGYVP  283 (460)
T ss_pred             HHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhh-hhhhcCCCC
Confidence              356776664   24556677778 889998854 8899999999999999999999998764333321 111122222


Q ss_pred             CEEEEccCccccCCCCC-cEEEEEEeCCCCCCCchHHHHHHhhh-----hccccCcchHHHHHHHhccchhhHHHHH--H
Q 019298          236 PILTLGSLSKRWIVPGW-RLGWFVTTDPCGMFRKPKVVERMKKY-----FDILGDPATFIQVCIMYGCLSTIMQIMI--H  307 (343)
Q Consensus       236 ~~i~~~S~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~  307 (343)
                      . ++  +++|.++ .|+ ++|++++++        ++.+.+...     ...++..++++.+++ .+.|+   .+.+  .
T Consensus       284 D-iv--t~gK~l~-~G~~pigav~~~~--------~i~~~~~~~~~~~~~~~T~~gnp~~~aaa-la~l~---~l~~~~~  347 (460)
T PRK06541        284 D-II--TCAKGIT-SGYSPLGAMIASD--------RLFEPFLDGPTMFLHGYTFGGHPVSAAVA-LANLD---IFEREGL  347 (460)
T ss_pred             C-EE--Eeccccc-CCccceeEEEEcH--------HHHHHhhcCCCccccCCCCCCCHHHHHHH-HHHHH---HHHhccH
Confidence            2 33  4899977 776 999999963        566665422     112445566766665 33332   1212  6


Q ss_pred             HHHHHHHHHHHHHhhcCC
Q 019298          308 GNFLENFAGSCVPSYKLI  325 (343)
Q Consensus       308 ~~~~~~~~~~~~~~L~~~  325 (343)
                      .++++++.+.+.+.|+++
T Consensus       348 ~~~~~~~g~~l~~~L~~l  365 (460)
T PRK06541        348 LDHVRDNEPAFRATLEKL  365 (460)
T ss_pred             HHHHHHHHHHHHHHHHHh
Confidence            677888888888877664

>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]

Probab=99.61  E-value=3.2e-13  Score=112.41  Aligned_cols=191  Identities=15%  Similarity=0.146  Sum_probs=150.4

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCC--------CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCC
Q 019298           52 HTTHVATEAVAEALLSEKFNGYAP--------TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP  123 (343)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~Y~~--------~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~  123 (343)
                      -.+++.++++-+.-+.=....|.-        .+-..+|.+.+++|+        .-|.+-+|.|+.++-+.++.+++++
T Consensus        28 iLt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFl--------g~D~~R~t~GARe~KfavMhal~~~   99 (382)
T COG1103          28 ILTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFL--------GMDEVRVTAGAREAKFAVMHALCKE   99 (382)
T ss_pred             cCCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHh--------CCceeeecccchhhHHHHHHHhccC
Confidence            367888888877644322222321        123567888999999        5689999999999999999999999


Q ss_pred             CCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-------CceEEEEeCCCCCcccccCHHHHH
Q 019298          124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-------NTVALVIINPGNPCGNVYSYQHLQ  196 (343)
Q Consensus       124 gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-------~~~~i~~~~p~nptG~~~~~~~l~  196 (343)
                      ||.|++...+|.+....+...|+++..+|-.....+.+++|...+.+.+       .+.+.++++|....|+.   .+.+
T Consensus       100 gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl---~Dak  176 (382)
T COG1103         100 GDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNL---ADAK  176 (382)
T ss_pred             CCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCc---hhhH
Confidence            9999999999999889999999999999866666788998887776642       36677889999889999   7889


Q ss_pred             HHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298          197 KLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (343)
Q Consensus       197 ~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~  261 (343)
                      +++++|+++++++++..+|..    +..+.+......   .++++|-+|++..+| .+|.+..+.
T Consensus       177 kva~ic~e~gvPlllN~AYt~----Grmpvs~ke~g~---DFiVgSGHKsmAAs~-PiGvl~~~e  233 (382)
T COG1103         177 KVAKICREYGVPLLLNCAYTV----GRMPVSGKEIGA---DFIVGSGHKSMAASA-PIGVLAMSE  233 (382)
T ss_pred             HHHHHHHHcCCceEeecceee----ccccccccccCC---CEEEecCccchhccC-CeeEEeehh
Confidence            999999999999999999987    333333333333   399999999975544 689887753

>PTZ00094 serine hydroxymethyltransferase; Provisional

Probab=99.61  E-value=5.5e-13  Score=125.64  Aligned_cols=267  Identities=12%  Similarity=0.083  Sum_probs=162.4

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC---CCC---HH----HHHHHHHHHhhhCCCCCCCCcE
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT---AGL---PL----TRRAIAEYLSRDLPYKLTPNDV  103 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~---~g~---~~----lr~~ia~~~~~~~~~~~~~~~i  103 (343)
                      ....++|.-.+      ...+|.+++++...+.+....+++..   .|.   ..    .|+.+++++      +.+++++
T Consensus        33 ~~~~l~l~~se------n~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf------~a~~~~~  100 (452)
T PTZ00094         33 QIEGLELIASE------NFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAF------GLDPEEW  100 (452)
T ss_pred             HHcCeeEeccc------ccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHh------CCCcccc
Confidence            46678998887      34678899998888764221122211   121   22    344666666      3466777


Q ss_pred             EEe---cChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh--------cC--ceeEEeecCCCCCCCCCHHHHHhhh
Q 019298          104 FVT---SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF--------RH--IEVRHFDLLPDKGWEVDLDDIESLA  170 (343)
Q Consensus       104 ~~~---~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~--------~g--~~~~~~~~~~~~~~~~d~~~l~~~~  170 (343)
                      .++   +|+++++..++.++.++||+|++....|+........        .+  .++..++++.  ++.+|+++|++.+
T Consensus       101 ~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~--~g~id~~~L~~~l  178 (452)
T PTZ00094        101 GVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNE--KGLIDYDKLEELA  178 (452)
T ss_pred             eeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCC--CCCcCHHHHHHHH
Confidence            666   7889999999999999999999988888665433211        11  2233343433  3679999999998


Q ss_pred             cC-CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC-CcccccCCCCCEEEEccCccccC
Q 019298          171 DQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF-VPMGVFGSTVPILTLGSLSKRWI  248 (343)
Q Consensus       171 ~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~-~~~~~~~~~~~~i~~~S~sK~~~  248 (343)
                      +. +++++++.  ++.+|...+   +++|.++|+++|+++++|++++......... .++.     +-.++++|++|+++
T Consensus       179 ~~~~~~lvi~~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~-----~~D~l~~S~hK~l~  248 (452)
T PTZ00094        179 KAFRPKLIIAG--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFP-----YADVVTTTTHKSLR  248 (452)
T ss_pred             HHhCCCEEEEe--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCC-----CCcEEEcCCccCCC
Confidence            54 56665543  345888854   6677788889999999999998755432211 1111     23489999999864


Q ss_pred             CCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-cc-ccCcchHHHHHHHhccchhh--HHHHHHHHHHHHHHHHHHHhhcC
Q 019298          249 VPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DI-LGDPATFIQVCIMYGCLSTI--MQIMIHGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       249 ~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~-~~~~~~~~~~a~~~~~l~~~--~~~l~~~~~~~~~~~~~~~~L~~  324 (343)
                      +|  +.|++.+.+.. .   ..+...+.... .. .++++....+++ .+++...  ..+-+.++++.++++.+.+.|.+
T Consensus       249 GP--~Gg~l~~~~~~-~---~~l~~~~~~~~~p~~~G~~~~~~iaal-~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~  321 (452)
T PTZ00094        249 GP--RSGLIFYRKKV-K---PDIENKINEAVFPGLQGGPHNHQIAAI-AVQLKEVQSPEWKEYAKQVLKNAKALAAALEK  321 (452)
T ss_pred             CC--CceEEEEeccc-c---hHHHHhhccccCCCCCCCchHHHHHHH-HHHHHHHhChhHHHHHHHHHHHHHHHHHHHHh
Confidence            33  34787774311 0   01222222111 11 113333333333 4444432  12223778888999999999987


Q ss_pred             CCCceeeC
Q 019298          325 IPELINFK  332 (343)
Q Consensus       325 ~~g~~~~~  332 (343)
                      . |+.+..
T Consensus       322 ~-g~~v~~  328 (452)
T PTZ00094        322 R-GYDLVT  328 (452)
T ss_pred             C-CcEEec
Confidence            6 777543

>PLN02271 serine hydroxymethyltransferase

Probab=99.57  E-value=6.1e-12  Score=117.29  Aligned_cols=289  Identities=15%  Similarity=0.041  Sum_probs=175.1

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC---CC---CHHHHHHHHHHHhhhCCCCC-CC-CcEEEe
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT---AG---LPLTRRAIAEYLSRDLPYKL-TP-NDVFVT  106 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~---~g---~~~lr~~ia~~~~~~~~~~~-~~-~~i~~~  106 (343)
                      ..-|+|--.+      .-.++.+++++...+.+....+|+..   .|   ..+++....+...+.++... .. -+|..-
T Consensus       148 ~~~l~LIASE------N~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~  221 (586)
T PLN02271        148 FKGIELIASE------NFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPY  221 (586)
T ss_pred             hcCeeecccc------ccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeec
Confidence            4556665554      23578888887777655433444422   12   23454444444444454322 11 355555


Q ss_pred             cChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH---------HHhcCceeEEeecCC-CCCCCCCHHHHHh-hhcCCce
Q 019298          107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELS---------AAFRHIEVRHFDLLP-DKGWEVDLDDIES-LADQNTV  175 (343)
Q Consensus       107 ~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~---------~~~~g~~~~~~~~~~-~~~~~~d~~~l~~-~~~~~~~  175 (343)
                       +++.|+..++.+|++|||+|+..+..|++....         +...|..+..+++.. +....+|.+++++ +...+++
T Consensus       222 -SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPK  300 (586)
T PLN02271        222 -SCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPK  300 (586)
T ss_pred             -cHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhhcCCe
Confidence             567888888999999999999988877665332         133454444444322 2345699999998 5567888


Q ss_pred             EEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC-CcccccCCCCCEEEEccCccccCCCCCcE
Q 019298          176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF-VPMGVFGSTVPILTLGSLSKRWIVPGWRL  254 (343)
Q Consensus       176 ~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~-~~~~~~~~~~~~i~~~S~sK~~~~~G~r~  254 (343)
                      +|++....+|  ..+   +++++.++|+++|+++++|.++.......... .++..     -.++++|.+|+  +.|.|-
T Consensus       301 LII~g~Sayp--r~~---D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~-----aDvvt~TTHKt--LrGPrG  368 (586)
T PLN02271        301 ILICGGSSYP--REW---DYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDY-----CDIVTSTTHKS--LRGPRG  368 (586)
T ss_pred             EEEECchhcc--CcC---CHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcC-----CcEEEeCCccc--CCCCCc
Confidence            8887666777  333   35677888889999999999999654432211 22221     23899999999  567777


Q ss_pred             EEEEEeCCCC------------CCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchh--hHHHHHHHHHHHHHHHHHH
Q 019298          255 GWFVTTDPCG------------MFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLST--IMQIMIHGNFLENFAGSCV  319 (343)
Q Consensus       255 G~i~~~~~~~------------~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~~~~  319 (343)
                      |.+.+.+...            ...++++.+++.... ....+.+.....|+...++..  ..++-+..+++.++...|.
T Consensus       369 G~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA  448 (586)
T PLN02271        369 GIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALA  448 (586)
T ss_pred             eEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence            8888854210            000134555554442 211111222222222334432  2455558888999999999


Q ss_pred             HhhcCCCCcee-eCCCCceEeeecC
Q 019298          320 PSYKLIPELIN-FKSTGSSLKYLDL  343 (343)
Q Consensus       320 ~~L~~~~g~~~-~~~~~g~~~~~~l  343 (343)
                      +.|.+. |+.+ ........+|+|+
T Consensus       449 ~~L~~~-G~~vv~ggTdnHlvLvDl  472 (586)
T PLN02271        449 SALLRR-KCRLVTGGTDNHLLLWDL  472 (586)
T ss_pred             HHHHHC-CCeEeeCCCCcceeeecC
Confidence            999887 8884 4445566666664

>PLN02590 probable tyrosine decarboxylase

Probab=99.57  E-value=4.3e-12  Score=120.19  Aligned_cols=262  Identities=10%  Similarity=0.036  Sum_probs=166.5

Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-----CCcEEEecChHHHHHHHHHHhcC----------
Q 019298           58 TEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-----PNDVFVTSGCTQAIDVAMALLSR----------  122 (343)
Q Consensus        58 ~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-----~~~i~~~~g~~~al~~~~~~l~~----------  122 (343)
                      -+.+..++.. ....|...++..++++.+.+|+.+.+|.+-.     ...-++++|+++++..++.+..+          
T Consensus       148 gd~l~sa~n~-~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~  226 (539)
T PLN02590        148 GEMLNAGLSV-VGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTL  226 (539)
T ss_pred             HHHHHHhccc-ccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccC
Confidence            3334444432 3345655667899999999999998876532     12356789999888776655422          


Q ss_pred             -CCCeEEEeCCCCcchHHHHHhcCc---eeEEeecCCCCCCCCCHHHHHhhhcCC------ceEEEEeCCCCCcccccCH
Q 019298          123 -PGANILLPRPGFPIYELSAAFRHI---EVRHFDLLPDKGWEVDLDDIESLADQN------TVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       123 -~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~i~~~~p~nptG~~~~~  192 (343)
                       +.-+|++.+.+|.+....+...|+   .++.++++..+++.+|+++|++++.+.      |-+|+-+-....||.+   
T Consensus       227 ~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGai---  303 (539)
T PLN02590        227 LPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAV---  303 (539)
T ss_pred             CCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCccc---
Confidence             122566778899999999999998   477888876567789999999988542      3344445557899999   


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCc-ccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~-~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  271 (343)
                      +++++|+++|++||+|+.||.||+++..-...... +..++.  -.=+...++|. +.....+|.+++.++.      .+
T Consensus       304 Dpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~--ADSit~D~HK~-l~~p~~cg~llvr~~~------~l  374 (539)
T PLN02590        304 DPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIEN--ADSFNMNAHKW-LFANQTCSPLWVKDRY------SL  374 (539)
T ss_pred             CCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCcc--CCEEEECchhh-cCcCcCEEEEEecCHH------HH
Confidence            99999999999999999999999987533222111 111111  12456689999 4566778888886532      22


Q ss_pred             HHHHhhh---h--------------ccccCcc-hHHHHHHHhccchh--hHHHHHHHHHHHHHHHHHHHhhcCCCCceee
Q 019298          272 VERMKKY---F--------------DILGDPA-TFIQVCIMYGCLST--IMQIMIHGNFLENFAGSCVPSYKLIPELINF  331 (343)
Q Consensus       272 ~~~l~~~---~--------------~~~~~~~-~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~  331 (343)
                      .+.+...   .              ......+ .+....+ ...|+.  ...+.+..++.-+..+++.+.|++.|++++.
T Consensus       375 ~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLkl-W~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~  453 (539)
T PLN02590        375 IDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKL-WMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVV  453 (539)
T ss_pred             HHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence            2222111   0              0000000 1111111 111111  1233337777778888899999888889854


Q ss_pred             CC
Q 019298          332 KS  333 (343)
Q Consensus       332 ~~  333 (343)
                      .+
T Consensus       454 ~~  455 (539)
T PLN02590        454 TT  455 (539)
T ss_pred             cC
Confidence            43

>PLN03226 serine hydroxymethyltransferase; Provisional

Probab=99.57  E-value=4.3e-12  Score=119.37  Aligned_cols=286  Identities=13%  Similarity=0.031  Sum_probs=157.4

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC---CCCC---HHHHHHHHHHHhhhCCCCCCCCcEEE--
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP---TAGL---PLTRRAIAEYLSRDLPYKLTPNDVFV--  105 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~---~~lr~~ia~~~~~~~~~~~~~~~i~~--  105 (343)
                      ....|+|--.+      ...++.+++++...+.+....+|+.   ..|.   .++++...+...+.++  ...+.+.+  
T Consensus        33 q~~~l~liase------n~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~--~~~~~~~~nv  104 (475)
T PLN03226         33 QWKGLELIASE------NFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFR--LDPEKWGVNV  104 (475)
T ss_pred             HHcCeeEecCC------ccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhC--CCcceeEEec
Confidence            34567776666      2467899999988884332223322   1232   3333322222222222  23344433  


Q ss_pred             -ecChHHHHHHHHHHhcCCCCeEEEeCCCCcch-HHHHHh-----cCceeE----EeecCCCCCCCCCHHHHHhhhcC-C
Q 019298          106 -TSGCTQAIDVAMALLSRPGANILLPRPGFPIY-ELSAAF-----RHIEVR----HFDLLPDKGWEVDLDDIESLADQ-N  173 (343)
Q Consensus       106 -~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~-~~~~~~-----~g~~~~----~~~~~~~~~~~~d~~~l~~~~~~-~  173 (343)
                       .++++.++..++.+|++|||+|+..+....++ .+....     .+....    .+..+. ++..+|+++|++.+.. +
T Consensus       105 ~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~-~~g~iD~d~Le~~l~~~~  183 (475)
T PLN03226        105 QPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDE-STGLIDYDKLEKKAMLFR  183 (475)
T ss_pred             CcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecC-CCCCcCHHHHHHHHhhcC
Confidence             36678899999999999999999855322221 121111     112211    333333 4567999999998864 5


Q ss_pred             ceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC-CcccccCCCCCEEEEccCccccCCCCC
Q 019298          174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF-VPMGVFGSTVPILTLGSLSKRWIVPGW  252 (343)
Q Consensus       174 ~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~-~~~~~~~~~~~~i~~~S~sK~~~~~G~  252 (343)
                      +++|++ ..++ +|...   ++++|.++|+++|.++++|++|.....+.... .++.     .-.++++|++|++  .|.
T Consensus       184 pklIv~-~~S~-~s~~~---D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~-----~~Div~~t~hK~L--~GP  251 (475)
T PLN03226        184 PKLIIA-GASA-YPRDW---DYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFE-----YCDVVTTTTHKSL--RGP  251 (475)
T ss_pred             CeEEEE-ecCc-CCCcc---CHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCC-----CCeEEEecCcccc--cCC
Confidence            665544 3333 56663   46678888999999999999998755443221 1111     2338899999996  333


Q ss_pred             cEEEEEEeCCCCCCC-------chHHHHHHhhhh-ccccCcchHHHHHHHhccchhhH--HHHHHHHHHHHHHHHHHHhh
Q 019298          253 RLGWFVTTDPCGMFR-------KPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIM--QIMIHGNFLENFAGSCVPSY  322 (343)
Q Consensus       253 r~G~i~~~~~~~~~~-------~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~--~~l~~~~~~~~~~~~~~~~L  322 (343)
                      +.|++.+++.. ...       ..++.+.+.... ..+.+.+...+.++..+++....  .+-+.++++.++.+.+.+.|
T Consensus       252 ~Gg~I~~~~~~-~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L  330 (475)
T PLN03226        252 RGGMIFFRKGP-KPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRL  330 (475)
T ss_pred             CceEEEEchhh-cccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHH
Confidence            34888875321 100       001222222121 11222233333333244444321  22236888999999999999


Q ss_pred             cCCCCceeeCC-CCceEeeec
Q 019298          323 KLIPELINFKS-TGSSLKYLD  342 (343)
Q Consensus       323 ~~~~g~~~~~~-~~g~~~~~~  342 (343)
                      .+. |+.+..+ .....++++
T Consensus       331 ~~~-G~~l~~~~t~~hi~lv~  350 (475)
T PLN03226        331 MSK-GYKLVTGGTDNHLVLWD  350 (475)
T ss_pred             HhC-CCEEEcCCCCCCEEEEE
Confidence            886 8886543 223444443

>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family

Probab=99.56  E-value=3.6e-13  Score=123.01  Aligned_cols=242  Identities=12%  Similarity=0.015  Sum_probs=151.8

Q ss_pred             CCCcHHHHHHHHHHHhcC---CCCCCCCC-------CCCHHHHHHHHHHHhhhCCCCC-CCCcEEEecC-hHHHHHHHHH
Q 019298           51 FHTTHVATEAVAEALLSE---KFNGYAPT-------AGLPLTRRAIAEYLSRDLPYKL-TPNDVFVTSG-CTQAIDVAMA  118 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~---~~~~Y~~~-------~g~~~lr~~ia~~~~~~~~~~~-~~~~i~~~~g-~~~al~~~~~  118 (343)
                      ...++.+++++.+.+.+.   .-..|...       .-..+.|+.+++++      +. ++++|++|+| +|++++.++.
T Consensus         8 ~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~------~~~~~~~vvf~~gs~T~a~~~~~~   81 (355)
T cd00611           8 AALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELL------NIPDNYKVLFLQGGATGQFAAVPL   81 (355)
T ss_pred             CCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHh------CCCCCceEEEEcCCchHHHHHHHH
Confidence            567899999998887421   11112221       12356778888887      33 4678999988 9999999999


Q ss_pred             HhcC---CCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCC-HHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298          119 LLSR---PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD-LDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (343)
Q Consensus       119 ~l~~---~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~  194 (343)
                      .+..   +||.|++ .+....+...++..|.+++.++.+....+ .+ .+..+..+++++++|.+++..|.||...+   
T Consensus        82 ~l~~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~---  156 (355)
T cd00611          82 NLLGDKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKEEGKY-TKIPDVETWDLAPDAAYVHYCSNETIHGVEFD---  156 (355)
T ss_pred             hcCCCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEecccccCC-CCCCCHhhcCCCCCCCEEEEeCCcccccEEcc---
Confidence            9987   4455543 22222223367888998888876432222 13 23333345678899999999999999743   


Q ss_pred             HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (343)
Q Consensus       195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~  274 (343)
                           ++++.+|+++++|.+.....    .+..+..++     +.+.|..|.||.+|  +|+++++.        ++.++
T Consensus       157 -----~i~~~~g~~~~VDa~qs~g~----~~idv~~~~-----~~~ss~~K~lGP~G--~g~l~~~~--------~~~~~  212 (355)
T cd00611         157 -----EVPDTGGVPLVADMSSNILS----RPIDVSKFG-----VIYAGAQKNLGPAG--VTVVIVRK--------DLLGK  212 (355)
T ss_pred             -----eecccCCCeEEEEccccccC----CCCCHHHhC-----EEEeecccccCCCc--eEEEEECH--------HHHhh
Confidence                 34446999999999998732    222232222     45666899988777  78887754        33333


Q ss_pred             Hhhh-----------h--ccccCcchHHHHHHHhccchhhHHH--HH-HHHHHHHHHHHHHHhhcCCCCc
Q 019298          275 MKKY-----------F--DILGDPATFIQVCIMYGCLSTIMQI--MI-HGNFLENFAGSCVPSYKLIPEL  328 (343)
Q Consensus       275 l~~~-----------~--~~~~~~~~~~~~a~~~~~l~~~~~~--l~-~~~~~~~~~~~~~~~L~~~~g~  328 (343)
                      +...           .  ...+.++.....++ .++++...+.  ++ ..++.++..+.+.+.|+++||+
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L-~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl  281 (355)
T cd00611         213 ARKITPSMLNYKTHADNNSLYNTPPTFAIYMM-GLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGF  281 (355)
T ss_pred             cccCCCCcccHHHHHhcCCCCCCChHHHHHHH-HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccc
Confidence            2211           1  11223333333443 5555433222  33 7888899999999999999876

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.

>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]

Probab=99.56  E-value=9.6e-13  Score=120.36  Aligned_cols=268  Identities=16%  Similarity=0.084  Sum_probs=162.8

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHHHHhhhCCCCC-CCCcEEEecCh
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEK--FNGYAPTAGLPLTRRAIAEYLSRDLPYKL-TPNDVFVTSGC  109 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~-~~~~i~~~~g~  109 (343)
                      ++.+|||..|....  +++ .+|.+.+++++++....  ...|.......++-+.+.+.+      +. ..+.+++++++
T Consensus        55 G~~ylDf~sgi~v~--~~GH~hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~------p~~~~~~~~f~~sG  126 (447)
T COG0160          55 GNEYLDFLSGIAVL--NLGHNHPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALA------PGSGLKKVFFGNSG  126 (447)
T ss_pred             CCEEEEcccCcchh--ccCCCCHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhC------CcccCCeEEecCCc
Confidence            88999999876442  233 78999999999887532  223333222334444444444      22 45689999999


Q ss_pred             HHHHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHh-cCc-------------eeEEeecCCC--CCCCC--------CH
Q 019298          110 TQAIDVAMALLS--RPGANILLPRPGFPIYELSAAF-RHI-------------EVRHFDLLPD--KGWEV--------DL  163 (343)
Q Consensus       110 ~~al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~-~g~-------------~~~~~~~~~~--~~~~~--------d~  163 (343)
                      ++|++.+++...  .....|+...-.|++....+.. .|.             .+..+|....  .-+..        ..
T Consensus       127 aeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~  206 (447)
T COG0160         127 AEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDAL  206 (447)
T ss_pred             HHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHH
Confidence            999999998753  2235777777777654333222 221             1333333211  11111        23


Q ss_pred             HHHHhhhcC-----CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCC
Q 019298          164 DDIESLADQ-----NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP  236 (343)
Q Consensus       164 ~~l~~~~~~-----~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~  236 (343)
                      +.+++.+..     ...+.++.-| +.-.|.. .|++.++++.++|++||+++|+||++.++...|+ ...+..++-.+.
T Consensus       207 ~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~-~fa~E~~gv~PD  285 (447)
T COG0160         207 EYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGK-MFAFEHFGVEPD  285 (447)
T ss_pred             HHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccc-chhhhhcCCCCC
Confidence            445553321     2344455555 7778877 6678899999999999999999999999987773 334333333223


Q ss_pred             EEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHH
Q 019298          237 ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAG  316 (343)
Q Consensus       237 ~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~  316 (343)
                      ++   +++|.++. |+.+|.++..        +++.+..-.....++..++++.+++ .+.|+...+- .+.++..+.-+
T Consensus       286 iv---t~aK~ig~-G~Pl~avv~r--------~ei~~~~~g~~~~Tf~GNpva~Aaa-~AvL~vie~e-~L~~~a~~~G~  351 (447)
T COG0160         286 IV---TLAKSLGG-GLPLSAVVGR--------AEIMDWPPGGHGGTFGGNPVACAAA-LAVLDVIEEE-NLLERAAELGE  351 (447)
T ss_pred             EE---EecccccC-CCceeEEecc--------HHhcccCCcccCCCCCcCHHHHHHH-HHHHHHHHHc-cHHHHHHHHHH
Confidence            33   57999776 9999999984        3444422222334678888888887 5554321100 15555555555


Q ss_pred             HHHHhhcC
Q 019298          317 SCVPSYKL  324 (343)
Q Consensus       317 ~~~~~L~~  324 (343)
                      ++.+.|.+
T Consensus       352 ~l~~~L~~  359 (447)
T COG0160         352 YLRDRLEE  359 (447)
T ss_pred             HHHHHHHH
Confidence            55555543

>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]

Probab=99.55  E-value=4.4e-12  Score=114.10  Aligned_cols=278  Identities=18%  Similarity=0.103  Sum_probs=177.3

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      ++.+||+..++-.... -..+|.+.+++++++.++.  .|+.+   .++.-.+|+.+.++.+   ..|.|-+++++|+|.
T Consensus        52 Gn~YIDy~~~~Gp~il-GH~~p~V~~Av~~~l~~G~--~fg~P---te~Ei~~Aell~~~~p---~~e~vrfvnSGTEAt  122 (432)
T COG0001          52 GNEYIDYVLGWGPLIL-GHAHPAVVEAVQEQLERGL--SFGAP---TELEVELAELLIERVP---SIEKVRFVNSGTEAT  122 (432)
T ss_pred             CCEeeehhccCccccc-CCCCHHHHHHHHHHHHhcC--CCCCC---CHHHHHHHHHHHHhcC---cccEEEEecchhHHH
Confidence            8899999999833221 2277889999999998874  45553   3566666666655322   348999999999999


Q ss_pred             HHHHHHhc--CCCCeEEEeCCCCcchHHHHHh-cCceeEEe--ecC-------------CCCCCCCCHHHHHhhhcCC--
Q 019298          114 DVAMALLS--RPGANILLPRPGFPIYELSAAF-RHIEVRHF--DLL-------------PDKGWEVDLDDIESLADQN--  173 (343)
Q Consensus       114 ~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~-~g~~~~~~--~~~-------------~~~~~~~d~~~l~~~~~~~--  173 (343)
                      ..+++...  -..|+|+..+-||++..+.+.. .|...-..  +..             -+-+   |++.+++++++.  
T Consensus       123 msAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN---D~~al~~~~~~~g~  199 (432)
T COG0001         123 MSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN---DLEALEEAFEEYGD  199 (432)
T ss_pred             HHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCC---CHHHHHHHHHHcCC
Confidence            99988753  1338999999999877664433 22111100  000             0011   799999988763  


Q ss_pred             ceEEEEeCC--CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCC
Q 019298          174 TVALVIINP--GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG  251 (343)
Q Consensus       174 ~~~i~~~~p--~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G  251 (343)
                      ..+.+|..|  .|..=+...++.++.|.++|+++|+++|.||+..+|...-........+.++     +.++.|. ...|
T Consensus       200 ~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PD-----lttlGKi-IGGG  273 (432)
T COG0001         200 DIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPD-----LTTLGKI-IGGG  273 (432)
T ss_pred             cEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcc-----hhhhhhh-hcCC
Confidence            445566777  4543334566789999999999999999999999876542222222222222     3468999 5789


Q ss_pred             CcEEEEEEeCCCCCCCchHHHHHHhhh----hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCC--
Q 019298          252 WRLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLI--  325 (343)
Q Consensus       252 ~r~G~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~--  325 (343)
                      +.+|.+-++        .++.+.+.-.    +..+.+.++.+.+|. .+.|.....--...+++.+..+.|.+.|++.  
T Consensus       274 lP~ga~gGr--------~eiM~~~~p~g~vyqaGT~sgnplamaAG-~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~  344 (432)
T COG0001         274 LPIGAFGGR--------AEIMEQLAPLGPVYQAGTLSGNPLAMAAG-LATLEELMTEEGVYERLDALGERLAEGLRAAAE  344 (432)
T ss_pred             cceeeeccH--------HHHHhhhCCCCCccccCCCCCcHHHHHHH-HHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence            999998874        3566655433    223567788888887 5555422110014566666666666666541  


Q ss_pred             -CCcee-eCCCCceE
Q 019298          326 -PELIN-FKSTGSSL  338 (343)
Q Consensus       326 -~g~~~-~~~~~g~~  338 (343)
                       -|+++ ....+++|
T Consensus       345 ~~g~~~~v~~~gsm~  359 (432)
T COG0001         345 RHGIPLTVNRVGSMF  359 (432)
T ss_pred             HhCCCeEEeeecceE
Confidence             25552 23444444

>PRK05769 4-aminobutyrate aminotransferase; Provisional

Probab=99.55  E-value=2.3e-12  Score=120.69  Aligned_cols=271  Identities=18%  Similarity=0.116  Sum_probs=158.7

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++.++|+..|.-..  .++ .+|.+.+++++++.....  +....-..+....+|+.+...... -..+.+++++++++
T Consensus        52 dG~~ylD~~~g~~~~--~lGh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~lAe~L~~~~p~-~~~~~v~f~~SGsE  126 (441)
T PRK05769         52 DGNVYLDFNAGIAVT--NVGHAHPKVVKAVKEQAEKFLH--YSLTDFYYEPAVELAERLVEIAPG-GFEKKVFFTNSGTE  126 (441)
T ss_pred             CCCEEEECCCchhhc--ccCCCCHHHHHHHHHHHHhccC--ccCcccCCHHHHHHHHHHHHhCCC-CCCCEEEECCchHH
Confidence            378889998886432  233 679999999999875321  111111123445555555432210 01368999999999


Q ss_pred             HHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhc-Cc-------------eeEEeecCCCCC--CC-C--------CHH
Q 019298          112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDKG--WE-V--------DLD  164 (343)
Q Consensus       112 al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~--~~-~--------d~~  164 (343)
                      |++.+++...  ....+|+...-+|++....+... +.             .+..++......  +. -        .++
T Consensus       127 A~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (441)
T PRK05769        127 SNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLD  206 (441)
T ss_pred             HHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHH
Confidence            9999988653  12367888888887765443332 11             112222110000  00 0        123


Q ss_pred             HHHh-hhc----CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCE
Q 019298          165 DIES-LAD----QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI  237 (343)
Q Consensus       165 ~l~~-~~~----~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~  237 (343)
                      .+++ .++    .+..+.++.-| ....|.. .+.+.++++.++|++||+++|+||++.++...+... ....++-.+. 
T Consensus       207 ~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~-a~~~~gv~pD-  284 (441)
T PRK05769        207 FIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMF-AIEHFGVEPD-  284 (441)
T ss_pred             HHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccccee-hhhccCCCCC-
Confidence            3555 222    23344555566 5666775 467899999999999999999999999875554321 2222222223 


Q ss_pred             EEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHH
Q 019298          238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGS  317 (343)
Q Consensus       238 i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~  317 (343)
                      ++  +++|.++ .|+++|+++++.        ++..........+++.++++.+++ .+.|+...+  +..++++++-+.
T Consensus       285 iv--t~~K~l~-~G~p~gav~~~~--------~i~~~~~~~~~~T~~g~p~~~aaa-~a~L~~l~~--~~~~~~~~~g~~  350 (441)
T PRK05769        285 II--TLAKAIA-GGLPLGAVIGRA--------ELMFLPPGSHANTFGGNPVAAAAA-LATLEELEE--GLLENAQKLGEY  350 (441)
T ss_pred             EE--EEccccc-CCcccEEEEEeh--------hhhhcCCCCCCCCCCcCHHHHHHH-HHHHHHHHH--HHHHHHHHHHHH
Confidence            33  4799987 689999998853        344322222333445677777777 555554333  455666666666


Q ss_pred             HHHhhcC
Q 019298          318 CVPSYKL  324 (343)
Q Consensus       318 ~~~~L~~  324 (343)
                      +.+.|++
T Consensus       351 l~~~L~~  357 (441)
T PRK05769        351 LRKELKE  357 (441)
T ss_pred             HHHHHHH
Confidence            6666654

>PRK08593 4-aminobutyrate aminotransferase; Provisional

Probab=99.54  E-value=2.6e-12  Score=120.41  Aligned_cols=270  Identities=13%  Similarity=0.033  Sum_probs=152.9

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEecChH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVTSGCT  110 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~~~~g~~  110 (343)
                      +++.++|+..|.-..  .++ .+|.+.++++++++.....  .......+....+++.+....  +-. .+.|+++++++
T Consensus        40 dG~~ylD~~~g~~~~--~lGH~~p~v~~Ai~~ql~~~~~~--~~~~~~~~~~~~lae~L~~~~--p~~~~~~v~f~~SGs  113 (445)
T PRK08593         40 DGKTYIDLLASASSQ--NVGHAPPRVVEAIKAQADKFIHY--TPAYMYHEPLVRLAKKLCELA--PGDFEKRVTFGLSGS  113 (445)
T ss_pred             CCCEEEECCccHHhh--cCCCCCHHHHHHHHHHHHhccCc--cccccCCHHHHHHHHHHHHhC--CCCCCCEEEECCchH
Confidence            388899998775331  133 7899999999998754211  111111233344444443322  112 25899999999


Q ss_pred             HHHHHHHHHhcC--CCCeEEEeCCCCcchHHHHH-hcCc-------------eeEEeecCCCCC--CC-CC-------HH
Q 019298          111 QAIDVAMALLSR--PGANILLPRPGFPIYELSAA-FRHI-------------EVRHFDLLPDKG--WE-VD-------LD  164 (343)
Q Consensus       111 ~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~-~~g~-------------~~~~~~~~~~~~--~~-~d-------~~  164 (343)
                      +++..+++....  ...+|+..+-+|++....+. ..+.             .+..++......  +. .+       ++
T Consensus       114 eA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  193 (445)
T PRK08593        114 DANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLA  193 (445)
T ss_pred             HHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHH
Confidence            999999986421  22568888888877544332 2221             122222111000  00 01       23


Q ss_pred             HHHhhhc-----CCceEEEEeCCCCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEE
Q 019298          165 DIESLAD-----QNTVALVIINPGNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPIL  238 (343)
Q Consensus       165 ~l~~~~~-----~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i  238 (343)
                      ++++.+.     ++..+|++....+..|.. .+.+.++++.++|++||+++|+||++.++...+... ....++-.+.  
T Consensus       194 ~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~-a~~~~gv~pD--  270 (445)
T PRK08593        194 PLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWS-SISHFNITPD--  270 (445)
T ss_pred             HHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHH-HHHhcCCCCC--
Confidence            4444332     233444444446677876 788999999999999999999999998875544321 1111221122  


Q ss_pred             EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHH
Q 019298          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGS  317 (343)
Q Consensus       239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~  317 (343)
                       +.+++|.++ .|+++|+++++        +++.+.+.... ..+.+.++.+.+++ .+.|+...+ .+..++++++-+.
T Consensus       271 -i~t~gK~l~-~G~p~gav~~~--------~~i~~~~~~~~~~~T~~~~pl~~aaa-~a~l~~l~~-~~l~~~~~~~g~~  338 (445)
T PRK08593        271 -LMSFGKSLA-GGMPMSAIVGR--------KEIMESLEAPAHLFTTGANPVSCAAA-LATIDMIED-ESLLQRSAEKGEY  338 (445)
T ss_pred             -Eeeeccccc-CCcccEEEEEc--------HHHHhhhccCCCCCCCCCCHHHHHHH-HHHHHHHHh-ccHHHHHHHHHHH
Confidence             337899976 67999999985        36777664322 23556677777666 444332100 0144444544445


Q ss_pred             HHHhhc
Q 019298          318 CVPSYK  323 (343)
Q Consensus       318 ~~~~L~  323 (343)
                      +.+.|+
T Consensus       339 l~~~L~  344 (445)
T PRK08593        339 ARKRFD  344 (445)
T ss_pred             HHHHHH
Confidence            544444

>PLN02880 tyrosine decarboxylase

Probab=99.54  E-value=5.2e-12  Score=119.41  Aligned_cols=197  Identities=9%  Similarity=0.022  Sum_probs=137.2

Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-----CCcEEEecChHHHHHHHHHHhcC----------
Q 019298           58 TEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-----PNDVFVTSGCTQAIDVAMALLSR----------  122 (343)
Q Consensus        58 ~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-----~~~i~~~~g~~~al~~~~~~l~~----------  122 (343)
                      -+.+..++.. ....|...+...++++.+.+|+.+.+|.+-.     ...-++|+|+|+++..++.+..+          
T Consensus       100 ad~l~~~~n~-~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~  178 (490)
T PLN02880        100 GEMLSAGLNI-VGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNA  178 (490)
T ss_pred             HHHHHHhhcc-CCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccc
Confidence            3434444432 2334544557789999999999988876422     12467789999988777655421          


Q ss_pred             -CCCeEEEeCCCCcchHHHHHhcCce---eEEeecCCCCCCCCCHHHHHhhhcC-----C-ceEEEEeCCCCCcccccCH
Q 019298          123 -PGANILLPRPGFPIYELSAAFRHIE---VRHFDLLPDKGWEVDLDDIESLADQ-----N-TVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       123 -~gd~vl~~~p~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~d~~~l~~~~~~-----~-~~~i~~~~p~nptG~~~~~  192 (343)
                       +.-+|++.+-+|.+....+..+|+.   ++.++++..+++.+|+++|++++.+     . +-+|+-+-....||.+   
T Consensus       179 ~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~Gai---  255 (490)
T PLN02880        179 LEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAV---  255 (490)
T ss_pred             cCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCccc---
Confidence             1225667888899999999999985   6778877656778999999998853     1 3344445557899999   


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCC-cccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~-~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~  261 (343)
                      +++++|+++|++||+++++|.||+++........ .+..+.  .-.-++.+++|.+ .....+|.+.+.+
T Consensus       256 Dpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie--~aDSit~d~HKwl-~~P~~~g~llvr~  322 (490)
T PLN02880        256 DPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVE--EADSFNMNAHKWF-LTNFDCSLLWVKD  322 (490)
T ss_pred             CcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCch--hcCEEEECchhhc-CCCccEEEEEEeC
Confidence            7889999999999999999999998653221110 111111  1226788999995 6667788888865

>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []

Probab=99.54  E-value=1.9e-12  Score=117.45  Aligned_cols=288  Identities=17%  Similarity=0.128  Sum_probs=161.3

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC---CCCC---HHHHHHHHHHHhhhCCCCCCCCcE---E
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP---TAGL---PLTRRAIAEYLSRDLPYKLTPNDV---F  104 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~---~~lr~~ia~~~~~~~~~~~~~~~i---~  104 (343)
                      ....|+|--.+      .-.+|.+++++...+.+....+|+-   ..|.   .++++...+..++.|+.  .++..   +
T Consensus        19 q~~~l~LiaSE------N~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~--~~~~w~anv   90 (399)
T PF00464_consen   19 QRSTLNLIASE------NYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGA--EPKEWYANV   90 (399)
T ss_dssp             HHHSEE-CTT-----------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT---STTTEEEE-
T ss_pred             HhcCccccCcc------cccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCC--CcccceEEe
Confidence            45668887666      2357888887777665433223332   1222   34444444444444443  33333   2


Q ss_pred             EecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH---H-------HHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-C
Q 019298          105 VTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL---S-------AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-N  173 (343)
Q Consensus       105 ~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~---~-------~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~  173 (343)
                      -..+++.|...++.+|++|||+|+..++.+++...   .       +.....+...++++++ ...+|.|++++.+.. +
T Consensus        91 qp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~-~~~ID~d~l~~~a~~~k  169 (399)
T PF00464_consen   91 QPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPD-TGLIDYDELEKLAKEHK  169 (399)
T ss_dssp             --SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TT-TSSB-HHHHHHHHHHH-
T ss_pred             ecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecC-CCeECHHHHHHHHhhcC
Confidence            24567889999999999999999988887755422   1       1223456777887764 568999999997765 7


Q ss_pred             ceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCc-cccCCCCCCcccccCCCCCEEEEccCccccCCCCC
Q 019298          174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW  252 (343)
Q Consensus       174 ~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~  252 (343)
                      |++|++.....|-=     -+++++.++|.+.|.+++.|.+|.. ++-++.-+.++.. .    .++.+|++|+  ++|.
T Consensus       170 PklIi~G~S~y~~~-----~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~-A----Dvvt~sThKt--l~GP  237 (399)
T PF00464_consen  170 PKLIICGASSYPRP-----IDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPY-A----DVVTGSTHKT--LRGP  237 (399)
T ss_dssp             -SEEEEE-SSTSS--------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCT-S----SEEEEESSGG--G-SS
T ss_pred             CCEEEECchhccCc-----cCHHHHHHHHHhcCcEEEecccccccceehheecCcccc-c----eEEEeecccc--cccc
Confidence            78877755444422     3578888888899999999999984 4445543444432 2    2999999999  6888


Q ss_pred             cEEEEEEe------CCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchh--hHHHHHHHHHHHHHHHHHHHhhc
Q 019298          253 RLGWFVTT------DPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLST--IMQIMIHGNFLENFAGSCVPSYK  323 (343)
Q Consensus       253 r~G~i~~~------~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~~~~~~L~  323 (343)
                      |-|.|++.      +......++++.+++..... ...+.+.....++...++.+  ..++-+..+++.++.+.|.+.|.
T Consensus       238 rggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~  317 (399)
T PF00464_consen  238 RGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQ  317 (399)
T ss_dssp             S-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHh
Confidence            89999885      00000012578888876642 22222222222221333332  13455688889999999999999


Q ss_pred             CCCCceee-CCCCceEeeecC
Q 019298          324 LIPELINF-KSTGSSLKYLDL  343 (343)
Q Consensus       324 ~~~g~~~~-~~~~g~~~~~~l  343 (343)
                      +. |+.+. ....+..+|+++
T Consensus       318 ~~-G~~v~~ggTd~H~vlvd~  337 (399)
T PF00464_consen  318 ER-GFKVVTGGTDNHQVLVDL  337 (399)
T ss_dssp             HT-T-EEGGGS-SSSEEEEEG
T ss_pred             hC-CcEEEECCCCCCeEEEEe
Confidence            88 88854 345566667653

The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....

>PRK15029 arginine decarboxylase; Provisional

Probab=99.53  E-value=1.1e-12  Score=127.69  Aligned_cols=167  Identities=10%  Similarity=0.036  Sum_probs=122.7

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCC
Q 019298           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK  157 (343)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~  157 (343)
                      -..+..+.+|+.|+       .....++++|+|.++..++.+++++||+|++++.||-+..+.+...|+..+++...- +
T Consensus       206 ~I~eAq~~aA~~fg-------A~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~-~  277 (755)
T PRK15029        206 AFGESEKYAARVFG-------ADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSR-N  277 (755)
T ss_pred             HHHHHHHHHHHHhC-------CCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccc-c
Confidence            34566777777773       235678999999999999999999999999999999999999999999999886433 2


Q ss_pred             CC----CCC-----HHHHHhhhcC--Cce--------EEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCcc
Q 019298          158 GW----EVD-----LDDIESLADQ--NTV--------ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHL  218 (343)
Q Consensus       158 ~~----~~d-----~~~l~~~~~~--~~~--------~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~  218 (343)
                      .+    .++     .+.+++++..  ..+        ++++++|+. .|++   .++++|+++|+++++.+++||||+..
T Consensus       278 ~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~---~di~~I~~~~h~~~~~llvDEAhGah  353 (755)
T PRK15029        278 RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVC---YNAKEAQDLLEKTSDRLHFDEAWYGY  353 (755)
T ss_pred             ccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-ccee---eCHHHHHHHHHhcCCeEEEECccccc
Confidence            22    233     7888888753  223        778888755 6888   46788899999999999999999864


Q ss_pred             -ccCCCCCCccccc-----CCCC-CEEEEccCccccCCCCCcEEEEEE
Q 019298          219 -VFGDKPFVPMGVF-----GSTV-PILTLGSLSKRWIVPGWRLGWFVT  259 (343)
Q Consensus       219 -~~~~~~~~~~~~~-----~~~~-~~i~~~S~sK~~~~~G~r~G~i~~  259 (343)
                       .|.. .++....+     ...+ .++++.|.+|+  ++++.-|.++-
T Consensus       354 ~~F~~-~~p~~sa~~~~~~~~~Gad~~vvqStHKt--L~alTQaS~LH  398 (755)
T PRK15029        354 ARFNP-IYADHYAMRGEPGDHNGPTVFATHSTHKL--LNALSQASYIH  398 (755)
T ss_pred             cccCc-cccccccccccccccCCCceEEEEchhhc--ccchhhhhhhe
Confidence             3433 22211111     1123 35999999999  67777776543

>PLN02724 Molybdenum cofactor sulfurase

Probab=99.52  E-value=3.7e-12  Score=127.61  Aligned_cols=206  Identities=13%  Similarity=0.113  Sum_probs=133.5

Q ss_pred             eeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCCC----CCCCHHHHHHHHHHHhhhCCCCCCCC--cEEEec
Q 019298           37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF---NGYAP----TAGLPLTRRAIAEYLSRDLPYKLTPN--DVFVTS  107 (343)
Q Consensus        37 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~Y~~----~~g~~~lr~~ia~~~~~~~~~~~~~~--~i~~~~  107 (343)
                      .+.|+.+...    +..+..+.+++...+.....   ..|..    ..-..+.|+.+++|+      +.+++  +|++|+
T Consensus        35 ~iYLD~Aatt----~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~l------ga~~~~~~VvFts  104 (805)
T PLN02724         35 VVYLDHAGAT----LYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYF------NAPPSDYACVFTS  104 (805)
T ss_pred             CEeEeCCCCC----CCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHh------CCCccceEEEEeC
Confidence            6888888622    33445666666555432111   11211    112457888888888      44554  589999


Q ss_pred             ChHHHHHHHHHHh-cCCCCeEEEeCCCCcchHH---HHHhcCceeEEeecCCC------CCCCCCH--HHHHhhhc----
Q 019298          108 GCTQAIDVAMALL-SRPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPD------KGWEVDL--DDIESLAD----  171 (343)
Q Consensus       108 g~~~al~~~~~~l-~~~gd~vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~------~~~~~d~--~~l~~~~~----  171 (343)
                      |+|+++..++..+ .++||+|++..-.|.+...   .++..|++++.++++.+      ....+++  +++++.++    
T Consensus       105 naT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~  184 (805)
T PLN02724        105 GATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQ  184 (805)
T ss_pred             ChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhc
Confidence            9999999999887 5789999998777766443   33445888888876521      1112332  55665431    


Q ss_pred             ------CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhc-----CcEEEEccCCCccccCCCCCCcccccCCCCCEEEE
Q 019298          172 ------QNTVALVIINPGNPCGNVYSYQHLQKLAETANKL-----KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL  240 (343)
Q Consensus       172 ------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~-----~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~  240 (343)
                            ++++++.++..+|-||..+|.+.+.++.+.++.+     ++++++|.++..    +..+..+..++   -.+++
T Consensus       185 ~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~----g~~piDv~~~~---~Dfl~  257 (805)
T PLN02724        185 KREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGC----GTSPPDLSRYP---ADFVV  257 (805)
T ss_pred             cccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhc----CCCCCChhhcC---CCEEE
Confidence                  3457889999999999999987655544443332     368999999876    22223333333   34899


Q ss_pred             ccCccccC-CCCCcEEEEEEeC
Q 019298          241 GSLSKRWI-VPGWRLGWFVTTD  261 (343)
Q Consensus       241 ~S~sK~~~-~~G~r~G~i~~~~  261 (343)
                      .|++|.|| ..|  +|++.+..
T Consensus       258 ~S~HK~~GgP~G--~G~L~vr~  277 (805)
T PLN02724        258 VSFYKIFGYPTG--LGALLVRR  277 (805)
T ss_pred             EecceeccCCCC--ceEEEEeh
Confidence            99999987 345  78887754

>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]

Probab=99.52  E-value=1.9e-13  Score=115.03  Aligned_cols=209  Identities=16%  Similarity=0.143  Sum_probs=145.7

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--------CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEE
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--------KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVF  104 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~  104 (343)
                      ...++++|+-++   |.++-.+|++.++-.+++.+-        ...+|..  -+..|+..||+|.        ..|..+
T Consensus        65 ~~k~ilnFcaNn---YLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~--iHk~LE~kiAqfh--------~rED~i  131 (417)
T KOG1359|consen   65 SDKKILNFCANN---YLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQD--IHKLLESKIAQFH--------GREDTI  131 (417)
T ss_pred             cccceeeecccc---cccccCChHHHHHHHHHHHHhCCCccceeEEecchH--HHHHHHHHHHHHh--------CCCceE
Confidence            367888998877   456778999999988887641        1122222  2467888888888        457888


Q ss_pred             EecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhh----cCCceEEEEe
Q 019298          105 VTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA----DQNTVALVII  180 (343)
Q Consensus       105 ~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~----~~~~~~i~~~  180 (343)
                      +.+++-+|...++.++..|.|.|+..+-.|.+..+..+.+. +..          .+|+-.++..+    +.+-++|+-.
T Consensus       132 lypscfdANag~feail~pedAvfSDeLNhASIIdGirLck-ry~----------h~dv~~l~~~l~~a~k~r~klv~TD  200 (417)
T KOG1359|consen  132 LYPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGIRLCK-RYR----------HVDVFDLEHCLISACKMRLKLVVTD  200 (417)
T ss_pred             EeccccccchHHHHHhcChhhhhhccccccchhhhhhHHHh-hhc----------cchhHHHHHHHHHhhhheEEEEEec
Confidence            88888999999999999999999999989988777666554 111          13444455433    3344444444


Q ss_pred             CCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC-CCEEEEccCccccCCCCCcEEEEEE
Q 019298          181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST-VPILTLGSLSKRWIVPGWRLGWFVT  259 (343)
Q Consensus       181 ~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~-~~~i~~~S~sK~~~~~G~r~G~i~~  259 (343)
                      ..-...|.+   ..+++|++++++||.++++||+|+-+.++...-.....++-. +-.|+.++++|+.|.  .--||..+
T Consensus       201 g~FSMDGdi---aPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGg--a~GGyttg  275 (417)
T KOG1359|consen  201 GVFSMDGDI---APLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGG--ASGGYTTG  275 (417)
T ss_pred             ceeccCCCc---ccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcC--CCCCCccC
Confidence            446889999   457778888889999999999999887765433333333322 235889999999763  33499998


Q ss_pred             eCCCCCCCchHHHHHHhhh
Q 019298          260 TDPCGMFRKPKVVERMKKY  278 (343)
Q Consensus       260 ~~~~~~~~~~~~~~~l~~~  278 (343)
                      |.        +++.-++..
T Consensus       276 p~--------~li~llrqr  286 (417)
T KOG1359|consen  276 PK--------PLISLLRQR  286 (417)
T ss_pred             Ch--------hHHHHHHhc
Confidence            74        566666554

>PLN02263 serine decarboxylase

Probab=99.52  E-value=3.3e-11  Score=111.57  Aligned_cols=245  Identities=12%  Similarity=0.009  Sum_probs=162.5

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhcCceeEEeecCC
Q 019298           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLP  155 (343)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~  155 (343)
                      +..++++.+.+|+.+.+|.+-..-.=++|+|+|+++..++.+..+  +...+++++-+|.+....+..+|++++.++++ 
T Consensus       130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d-  208 (470)
T PLN02263        130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTL-  208 (470)
T ss_pred             hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccC-
Confidence            568999999999998877543211347899999999988877643  33478899999999999999999999999875 


Q ss_pred             CCCCCCCHHHHHhhhcCC---ceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCc-----EEEEccCCCccccCC-CCCC
Q 019298          156 DKGWEVDLDDIESLADQN---TVALVIINPGNPCGNVYSYQHLQKLAETANKLKT-----LVIADEVYGHLVFGD-KPFV  226 (343)
Q Consensus       156 ~~~~~~d~~~l~~~~~~~---~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~-----~~i~D~ay~~~~~~~-~~~~  226 (343)
                       .++.+|+++|++++.++   +-+|+.+-+..++|.+   +++++|.++|+++|+     ++.+|.||+++...- ...+
T Consensus       209 -~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAi---Dpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~  284 (470)
T PLN02263        209 -VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAV---DDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAP  284 (470)
T ss_pred             -CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCC---CCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccccc
Confidence             45689999999988653   3345556678899999   999999999999997     999999999865421 1111


Q ss_pred             cccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh-------hh-ccccCcchHHHHHHHhccc
Q 019298          227 PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK-------YF-DILGDPATFIQVCIMYGCL  298 (343)
Q Consensus       227 ~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~-------~~-~~~~~~~~~~~~a~~~~~l  298 (343)
                      .+. +.. .-.=+..+++|. +..-...|.++..+.        ....+..       .. ...++-+......+ ...|
T Consensus       285 ~~d-f~~-~vDSIsvD~HK~-l~~P~~cgvll~R~~--------~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~l-W~~L  352 (470)
T PLN02263        285 KVT-FKK-PIGSVSVSGHKF-VGCPMPCGVQITRME--------HINVLSSNVEYLASRDATIMGSRNGHAPIFL-WYTL  352 (470)
T ss_pred             ccC-CCc-CccEEEECCccc-cCCCcCEEEEEEehh--------hHhhhccChHhhCCCCCCcCCCCCcHHHHHH-HHHH
Confidence            111 111 122455689999 556677888888642        1222211       11 11111111111111 1222


Q ss_pred             hh--hHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCCCCceEee
Q 019298          299 ST--IMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKSTGSSLKY  340 (343)
Q Consensus       299 ~~--~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~~~g~~~~  340 (343)
                      +.  ...+.+..++..++.+++.+.|+++ |+. +..|.....+|
T Consensus       353 ~~~G~~G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~~V~f  396 (470)
T PLN02263        353 NRKGYRGFQKEVQKCLRNAHYLKDRLREA-GISAMLNELSSTVVF  396 (470)
T ss_pred             HHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCceEEEE
Confidence            21  1334447777777888888899888 565 55665544433

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.51  E-value=3.4e-12  Score=127.79  Aligned_cols=162  Identities=12%  Similarity=0.087  Sum_probs=128.1

Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEecChH----HHHHHHHHHhcCC-CC----eEEEeCCCCcchHHHHHhcCceeEEe
Q 019298           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCT----QAIDVAMALLSRP-GA----NILLPRPGFPIYELSAAFRHIEVRHF  151 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~----~al~~~~~~l~~~-gd----~vl~~~p~~~~~~~~~~~~g~~~~~~  151 (343)
                      ++|+.+++++    |    .++|.++++++    .++.++++.+.++ ||    +|+++...|+.....+...|.+++.+
T Consensus       572 ~~r~~la~i~----g----~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~v  643 (993)
T PLN02414        572 DLGDLLCEIT----G----FDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVVV  643 (993)
T ss_pred             HHHHHHHHHh----C----CCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEEe
Confidence            4555555555    2    39999999988    8999999998865 88    89999999999999999999999999


Q ss_pred             ecCCCCCCCCCHHHHHhhhcC---CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcc
Q 019298          152 DLLPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM  228 (343)
Q Consensus       152 ~~~~~~~~~~d~~~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~  228 (343)
                      +.+.  +..+|+++|++.+++   ++++|++++|+|-+|..   +++++|+++|+++|+++++|.++.....+   ....
T Consensus       644 ~~d~--~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e---~~I~eI~~iah~~Galv~vDgAq~~a~~~---l~~p  715 (993)
T PLN02414        644 GTDA--KGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYE---EGIDEICDIIHDNGGQVYMDGANMNAQVG---LTSP  715 (993)
T ss_pred             ccCC--CCCcCHHHHHHHHhccCCCeEEEEEECCCcccccc---chHHHHHHHHHHcCCEEEEEecCHHhccC---cCCc
Confidence            8863  447999999999984   67889999999999999   77899999999999999999998542111   1111


Q ss_pred             cccCCCCCEEEEccCccccC----CCCCcEEEEEEeC
Q 019298          229 GVFGSTVPILTLGSLSKRWI----VPGWRLGWFVTTD  261 (343)
Q Consensus       229 ~~~~~~~~~i~~~S~sK~~~----~~G~r~G~i~~~~  261 (343)
                      ..+   +-.++++|.+|+|+    ..|..+|++.+..
T Consensus       716 ~~~---GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~  749 (993)
T PLN02414        716 GFI---GADVCHLNLHKTFCIPHGGGGPGMGPIGVKK  749 (993)
T ss_pred             ccc---CCCEEEecCCccCCcCcccCCCCeeeEEEch
Confidence            222   23489999999876    3456689987743

>PLN02994 1-aminocyclopropane-1-carboxylate synthase

Probab=99.49  E-value=5.8e-13  Score=105.42  Aligned_cols=115  Identities=17%  Similarity=0.288  Sum_probs=86.1

Q ss_pred             cHHHHHHHHHh-hccccccccceeEeccCCCCCC-------------CCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHH
Q 019298           16 TIKGMLSLLMQ-SVDDEKNEKKVISLAMGDPTVH-------------SCFHTTHVATEAVAEALLSEKFNGYAPTAGLPL   81 (343)
Q Consensus        16 ~~~~~~~~~~~-~~~~~~~~~~~i~l~~g~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~   81 (343)
                      +.+.....+.. .+++..++.++|+|+.++..+.             +.+.+++.+.+++++.      ..|.+..|.++
T Consensus        23 ~~~~~~~~~~~~~y~~~~np~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~------a~Y~~~~G~~~   96 (153)
T PLN02994         23 PYFAGWKAYDLNPFDLLHNPQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDI------ALFQDYHGLAN   96 (153)
T ss_pred             hHHHHHHHHhcCCCCcccCCCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHH------hcCCCCCCcHH
Confidence            33443344444 4666678999999999873210             1122223333333331      34888899999


Q ss_pred             HHHHHHHHHhhhCC--CCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcc
Q 019298           82 TRRAIAEYLSRDLP--YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI  136 (343)
Q Consensus        82 lr~~ia~~~~~~~~--~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~  136 (343)
                      ||+++++|+.+++|  ..+++++|++|+|+++++..+++.++++||.|++++|+|+.
T Consensus        97 lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~  153 (153)
T PLN02994         97 FRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA  153 (153)
T ss_pred             HHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence            99999999999888  66889999999999999999999999999999999999973

>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.49  E-value=1.5e-11  Score=112.53  Aligned_cols=265  Identities=14%  Similarity=0.082  Sum_probs=162.3

Q ss_pred             HHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-----CCcEEEecChHHHHHHHHHHhcC--------C
Q 019298           57 ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-----PNDVFVTSGCTQAIDVAMALLSR--------P  123 (343)
Q Consensus        57 ~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-----~~~i~~~~g~~~al~~~~~~l~~--------~  123 (343)
                      +-+.+...+..+ ...|...+...++++.+.+|+.+.+|.+..     ...=++|+|+++++..++.+..+        .
T Consensus        56 ~~~~l~~~~n~n-~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~  134 (373)
T PF00282_consen   56 LADLLASALNQN-GFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAK  134 (373)
T ss_dssp             HHHHHHHHHT-B-TTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhhhccc-ccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhc
Confidence            344445555433 334554456788999999999998887621     23568899999999887755421        1


Q ss_pred             C------CeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC---C--ce-EEEEeCCCCCcccccC
Q 019298          124 G------ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---N--TV-ALVIINPGNPCGNVYS  191 (343)
Q Consensus       124 g------d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~--~~-~i~~~~p~nptG~~~~  191 (343)
                      |      -.|++.+-+|.+....+..+|+.++.+++++  ++.+|+++|++.+..   .  +. .|+.+-+...||.+  
T Consensus       135 ~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~--  210 (373)
T PF00282_consen  135 GVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAI--  210 (373)
T ss_dssp             TTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB--
T ss_pred             ccccccccccccccccccHHHHhcceeeeEEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCcccccc--
Confidence            1      2567777799999999999999999999875  567999999987753   2  33 44555668899999  


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCc-ccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchH
Q 019298          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK  270 (343)
Q Consensus       192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~-~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~  270 (343)
                       +++++|.++|+++++++.+|.+|++..+-.+.... ...++.  -.=+..+++|.+ ..-...|+++..++.      .
T Consensus       211 -D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~--adSit~d~HK~l-~~P~~~~~~l~r~~~------~  280 (373)
T PF00282_consen  211 -DPLEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIER--ADSITIDPHKWL-GVPYGCGVLLVRDKS------D  280 (373)
T ss_dssp             --SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGG--ESEEEEETTTTT-S-SSS-EEEEESSGG------G
T ss_pred             -cCHHHHhhhccccceeeeeccccccccccccccccccccccc--ccccccchhhhh-cCCccceeEEeeccc------c
Confidence             99999999999999999999999984332111111 111111  113456899995 455678999886532      1


Q ss_pred             HHHHHhhh----h-------------ccccCcchHHHHHH-Hhccchh--hHHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298          271 VVERMKKY----F-------------DILGDPATFIQVCI-MYGCLST--IMQIMIHGNFLENFAGSCVPSYKLIPELIN  330 (343)
Q Consensus       271 ~~~~l~~~----~-------------~~~~~~~~~~~~a~-~~~~l~~--~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~  330 (343)
                      +...+...    .             ..+...+. ...++ ....|+.  ...+.+..++..+..+.+.+.|++.+++++
T Consensus       281 l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el  359 (373)
T PF00282_consen  281 LRDAFSINADYLGNDDRESDESYDYGDYTLQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFEL  359 (373)
T ss_dssp             HHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEE
T ss_pred             hHHHhccChhhhcccccccccccccccccccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEE
Confidence            22222100    0             01112222 12222 1222221  122333777778888999999999988885


Q ss_pred             eC-CCCce
Q 019298          331 FK-STGSS  337 (343)
Q Consensus       331 ~~-~~~g~  337 (343)
                      .. |+-+.
T Consensus       360 ~~~~~~~~  367 (373)
T PF00282_consen  360 VNEPDLNI  367 (373)
T ss_dssp             SSTTSSSE
T ss_pred             EcCCCceE
Confidence            44 44433

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....

>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase

Probab=99.49  E-value=9.8e-12  Score=116.84  Aligned_cols=264  Identities=16%  Similarity=0.092  Sum_probs=159.2

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      ++++||+..|.-..  .++ .+|.+.++++++++....  +..   ..+.+..+++.+.....   ..+.+.+++++++|
T Consensus        98 G~~yiD~~~g~g~~--~lGh~~p~v~~av~~ql~~~~~--~~~---~~~~~~~lAe~l~~~~p---~~~~v~f~~SGsEA  167 (474)
T PLN02482         98 GNEYIDYVGSWGPA--IIGHADDEVLAALAETMKKGTS--FGA---PCLLENVLAEMVIDAVP---SVEMVRFVNSGTEA  167 (474)
T ss_pred             CCEEEEeccccccc--ccCCCCHHHHHHHHHHHhhCCC--CCC---CCHHHHHHHHHHHHhCC---CCCEEEEeCChHHH
Confidence            88899998876331  233 689999999999986532  221   12455556666654322   24799999999999


Q ss_pred             HHHHHHHhcC--CCCeEEEeCCCCcchHHHHH-hcCceeE--------EeecCC-CC----CCCCCHHHHHhhhcC--Cc
Q 019298          113 IDVAMALLSR--PGANILLPRPGFPIYELSAA-FRHIEVR--------HFDLLP-DK----GWEVDLDDIESLADQ--NT  174 (343)
Q Consensus       113 l~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~-~~g~~~~--------~~~~~~-~~----~~~~d~~~l~~~~~~--~~  174 (343)
                      ...+++....  ...+|+...-+|+++..... ..+....        .++... .+    .+ -|++.+++.+..  +.
T Consensus       168 ~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~~~~  246 (474)
T PLN02482        168 CMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-NDLEAVKKLFEANKGE  246 (474)
T ss_pred             HHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-CChHHHHHHHHhCCCc
Confidence            9999887531  23688888888887643211 1100000        000000 00    01 167888887753  23


Q ss_pred             eEEEEeCC-CCCcccccC-HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCC
Q 019298          175 VALVIINP-GNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW  252 (343)
Q Consensus       175 ~~i~~~~p-~nptG~~~~-~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~  252 (343)
                      .+.++..| ....|.+.+ .+.+++|.++|++||+++|+||++.++ ..+.. .....++-.+. +  .+++|.++ .|+
T Consensus       247 iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~-ga~~~~gv~PD-i--~t~gK~lg-gG~  320 (474)
T PLN02482        247 IAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYG-GAQEYFGITPD-L--TTLGKVIG-GGL  320 (474)
T ss_pred             eEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcc-hHhHHhCCCCC-E--EEecchhh-CCC
Confidence            44555666 566787654 788999999999999999999999877 33321 11111222222 3  36799976 679


Q ss_pred             cEEEEEEeCCCCCCCchHHHHHHhhh----hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC
Q 019298          253 RLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       253 r~G~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~  324 (343)
                      .+|.++++        +++.+.+...    ...+++.++++.+++ .+.|+...+ .+..++++++-+.+.+.|++
T Consensus       321 Pigav~g~--------~ei~~~~~~~~~~~~~~T~~gnpl~~aAa-la~L~~l~~-~~~~~~~~~~g~~l~~~L~~  386 (474)
T PLN02482        321 PVGAYGGR--------REIMEMVAPAGPMYQAGTLSGNPLAMTAG-IHTLKRLQQ-PGTYEYLDKITKKLIQGILE  386 (474)
T ss_pred             ceEEEEEc--------HHHHHhhccCCCcccccCcchhHHHHHHH-HHHHHHHhc-cCHHHHHHHHHHHHHHHHHH
Confidence            99999774        3677766421    122444567766665 444332110 01556666666666666554

>TIGR03372 putres_am_tran putrescine aminotransferase

Probab=99.49  E-value=1.1e-11  Score=115.49  Aligned_cols=267  Identities=15%  Similarity=0.095  Sum_probs=155.8

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEK-FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  110 (343)
                      +++.++|+..|.-.  ..++ .+|.+.+++++++.... ...|..    .+.+..+|+.+....  +-..+.++++++++
T Consensus        73 dG~~ylD~~~g~~~--~~lGh~hp~v~~Av~~ql~~l~~~~~~~~----~~~~~~lAe~L~~~~--p~~~~~v~f~~SGs  144 (442)
T TIGR03372        73 QGNEFIDCLGGFGI--FNVGHRNPNVIAAVENQLAKQPLHSQELL----DPLRALLAKTLAALT--PGKLKYSFFCNSGT  144 (442)
T ss_pred             CCCEEEECCccHHh--hhcCCCCHHHHHHHHHHHHhCCCcccccC----CHHHHHHHHHHHHhC--CCCcCEEEEeCCch
Confidence            38889999877422  1233 78999999999987532 222222    233444455443322  11236789999999


Q ss_pred             HHHHHHHHHhcC----CC-CeEEEeCCCCcchHHHHHhcCceeE----EeecCCCCC--CCCCHHHHHhhhcC-----Cc
Q 019298          111 QAIDVAMALLSR----PG-ANILLPRPGFPIYELSAAFRHIEVR----HFDLLPDKG--WEVDLDDIESLADQ-----NT  174 (343)
Q Consensus       111 ~al~~~~~~l~~----~g-d~vl~~~p~~~~~~~~~~~~g~~~~----~~~~~~~~~--~~~d~~~l~~~~~~-----~~  174 (343)
                      +|++.+++....    .| .+|+...-+|++....+........    ..++.+.-.  --.|.+.+++.+..     +.
T Consensus       145 EA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~  224 (442)
T TIGR03372       145 ESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDD  224 (442)
T ss_pred             HHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCc
Confidence            999999987532    23 5788888888776554443321110    011111000  01256666665531     22


Q ss_pred             eEEEEeCC-CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCC-
Q 019298          175 VALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-  251 (343)
Q Consensus       175 ~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-  251 (343)
                      .+.++..| ....|... +++.++++.++|++||+++|+||++.++...+.. .....++-.+. |+  +++|.++ .| 
T Consensus       225 vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~-~a~e~~gv~PD-iv--t~gK~lg-~G~  299 (442)
T TIGR03372       225 VAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKM-FACEHEGVQPD-IL--CLAKALG-GGV  299 (442)
T ss_pred             EEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccc-hhhhhcCCCCC-ee--eehhhhc-CCc
Confidence            34455555 66677765 6789999999999999999999999876544431 12222222222 33  4899975 57 


Q ss_pred             CcEEEEEEeCCCCCCCchHHHHHHhhh---hccccCcchHHHHHHHhccchhhHHHHH--HHHHHHHHHHHHHHhhcC
Q 019298          252 WRLGWFVTTDPCGMFRKPKVVERMKKY---FDILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       252 ~r~G~i~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~~~~~~~~~~L~~  324 (343)
                      +.+|.+++++        ++.+.+...   ...+++.++++.+++ .+.|+.   +.+  ..++.+++-+++.+.|++
T Consensus       300 ~Pigavv~~~--------~i~~~~~~~~~~~~~T~~gnp~~~Aaa-~a~L~~---i~~~~l~~~~~~~G~~l~~~L~~  365 (442)
T TIGR03372       300 MPIGATIATE--------AVFSVLFDNPFLHTTTFGGNPLACAAA-LATINE---LLEKNLPAQAAIKGDFLLDGFQQ  365 (442)
T ss_pred             ccceEEEecH--------HHHHhhhccCccccCCCCCCHHHHHHH-HHHHHH---HHhccHHHHHHHHHHHHHHHHHH
Confidence            6899988753        566666321   222445577777666 444321   111  445555555555555543

Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.

>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional

Probab=99.48  E-value=1.4e-11  Score=112.24  Aligned_cols=232  Identities=16%  Similarity=0.147  Sum_probs=145.4

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~  109 (343)
                      +++.++|+..|.-.  ..++ .+|.+.+++++++++...  ..|.. ....++.+.++++.        ..+.+++++++
T Consensus        22 dG~~ylD~~~g~~~--~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~-~~~~~la~~l~~~~--------~~~~v~~~~SG   90 (364)
T PRK04013         22 QGRRYLDLIAGIGV--NVLGHNHPEWVEEMSEQLEKLVVAGPMFEH-EEKEEMLEELSKWV--------NYEYVYMGNSG   90 (364)
T ss_pred             CCCEEEEcccChhh--ccCCCCCHHHHHHHHHHHHhcCCccCCcCC-HHHHHHHHHHHhhc--------CCCEEEEeCch
Confidence            38899999887533  1233 678999999999876321  12221 22234444444443        24689999999


Q ss_pred             HHHHHHHHHHhc-CCC-CeEEEeCCCCcchHHHHHhc-CceeE---EeecCCC---CCCCCCHHHHHhhhcCCceEEEEe
Q 019298          110 TQAIDVAMALLS-RPG-ANILLPRPGFPIYELSAAFR-HIEVR---HFDLLPD---KGWEVDLDDIESLADQNTVALVII  180 (343)
Q Consensus       110 ~~al~~~~~~l~-~~g-d~vl~~~p~~~~~~~~~~~~-g~~~~---~~~~~~~---~~~~~d~~~l~~~~~~~~~~i~~~  180 (343)
                      ++|++.+++... .+| ++|+..+-+|.+....+... +....   .-+..++   ..+ .|.+.+++.+.+++.++++.
T Consensus        91 seA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~-~d~~~l~~~i~~~~aAvivE  169 (364)
T PRK04013         91 TEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF-NDVEAAKEAITKETAAVIFE  169 (364)
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC-CCHHHHHHHhcCCcEEEEEc
Confidence            999999998764 234 78999999998765443331 11000   0000000   011 26788888887677776665


Q ss_pred             CCCCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298          181 NPGNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT  259 (343)
Q Consensus       181 ~p~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~  259 (343)
                      ......|.. .+.+.++++.++|++||+++|+||++.++ ..+.- .....++-.++++   +++|.++. |+.+|.++.
T Consensus       170 pi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~-~a~~~~gv~PDiv---~~gK~lgg-G~P~~a~~~  243 (364)
T PRK04013        170 PIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKF-LAIEHYKVEPDIV---TMGKGIGN-GVPVSLTLT  243 (364)
T ss_pred             CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCch-hHHHhcCCCCCEE---EecccccC-CceeEEEEe
Confidence            556555664 56788999999999999999999999987 44431 1222222222333   45999765 799999887


Q ss_pred             eCCCCCCCchHHHHHHhhhhccccCcchHHHHHH
Q 019298          260 TDPCGMFRKPKVVERMKKYFDILGDPATFIQVCI  293 (343)
Q Consensus       260 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~  293 (343)
                      +.        ++ ..  .....++..++.+.+++
T Consensus       244 ~~--------~~-~~--~~~~~T~~gnp~~~aaa  266 (364)
T PRK04013        244 NF--------DV-ER--GKHGSTFGGNPLACKAV  266 (364)
T ss_pred             cc--------cc-cC--CCcCCCCCcCHHHHHHH
Confidence            53        22 11  12233566778877777

>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.48  E-value=4.2e-11  Score=105.46  Aligned_cols=268  Identities=16%  Similarity=0.136  Sum_probs=170.4

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC------CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP------TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~  107 (343)
                      ....|+|--.+      .-.++.+++++-..+.+.-..+||-      ....+++++...+..++.||.  +.-+|...+
T Consensus        25 q~~~ieLIASE------N~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga--~~anVQPhS   96 (413)
T COG0112          25 QREHIELIASE------NFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGA--EYANVQPHS   96 (413)
T ss_pred             Hhhceeeeecc------ccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCC--CccccCCCC
Confidence            44667776555      2367899999888776543334432      223355666666666655553  445666667


Q ss_pred             ChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH---HHhcC--ceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeC
Q 019298          108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELS---AAFRH--IEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIIN  181 (343)
Q Consensus       108 g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~---~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~  181 (343)
                      | +.|...++.+|++|||+|+-.+-.++++..-   ....|  .+++.++++++ +..+|.|++++...+ +|++|+.-.
T Consensus        97 G-s~AN~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~e-t~~IDyD~~~k~a~e~kPK~ii~G~  174 (413)
T COG0112          97 G-SQANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPE-TGLIDYDEVEKLAKEVKPKLIIAGG  174 (413)
T ss_pred             c-hHHHHHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccc-cCccCHHHHHHHHHHhCCCEEEECc
Confidence            6 5667778889999999999887777554321   12223  34555666543 457999999997765 677766533


Q ss_pred             CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCc-cccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEe
Q 019298          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT  260 (343)
Q Consensus       182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~  260 (343)
                      ...|-  .   -+++++.++|.+-|.++++|.+|-. ++-++.-+.++...     .++.+|.+|+  +.|.|-|.|++.
T Consensus       175 SaY~r--~---id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~A-----dvVTtTTHKT--lrGPrGG~Il~~  242 (413)
T COG0112         175 SAYSR--P---IDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHA-----DVVTTTTHKT--LRGPRGGIILTN  242 (413)
T ss_pred             ccccc--c---cCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCcc-----ceEeCCcccC--CCCCCceEEEec
Confidence            32332  2   2567778888899999999999984 44444433343321     2999999999  688889998885


Q ss_pred             CCCCCCCchHHHHHHhhhh-cc-ccCcchHHHHHHHhccchh--hHHHHHHHHHHHHHHHHHHHhhcCCCCceeeC
Q 019298          261 DPCGMFRKPKVVERMKKYF-DI-LGDPATFIQVCIMYGCLST--IMQIMIHGNFLENFAGSCVPSYKLIPELINFK  332 (343)
Q Consensus       261 ~~~~~~~~~~~~~~l~~~~-~~-~~~~~~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~  332 (343)
                      +       .++.+++.... .. .+++.....++. ..++.+  ..++-+..+++.++...|.+.|... |+.++.
T Consensus       243 ~-------eel~kkin~aVFPg~qggpl~HviAak-aVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvs  309 (413)
T COG0112         243 D-------EELAKKINSAVFPGLQGGPLMHVIAAK-AVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFKVVS  309 (413)
T ss_pred             c-------HHHHHHhhhhcCCccCCChHHHHHHHH-HHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-CCeEec
Confidence            3       46888887643 21 222222222222 222221  1334447888889999999999887 888543

>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species

Probab=99.47  E-value=4.9e-13  Score=115.78  Aligned_cols=216  Identities=18%  Similarity=0.177  Sum_probs=132.5

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCC------CCeEEEeCCCCcchHHHHHhcCceeEEee
Q 019298           79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP------GANILLPRPGFPIYELSAAFRHIEVRHFD  152 (343)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~------gd~vl~~~p~~~~~~~~~~~~g~~~~~~~  152 (343)
                      .++|.+.|.+++....+.-.+...|++++|+++.++.++.+|...      --.|+...|.|+.|.............+.
T Consensus        45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~  124 (363)
T PF04864_consen   45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWA  124 (363)
T ss_dssp             -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEE
T ss_pred             cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcccc
Confidence            478999999988776665566679999999999999999999532      14799999999999877666554444443


Q ss_pred             cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (343)
Q Consensus       153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~  232 (343)
                      -+. ..|.       ..-+..+-+=++++||||.|..     .+.++   +.-+..+|.|-||..-.|..     +..  
T Consensus       125 Gda-~~~~-------~~~~~~~~IElVTSPNNPDG~l-----r~~V~---~g~~~k~I~D~AYYWPhyTp-----I~~--  181 (363)
T PF04864_consen  125 GDA-SNFK-------NSDNPSPYIELVTSPNNPDGQL-----REAVL---NGSSGKVIHDLAYYWPHYTP-----ITA--  181 (363)
T ss_dssp             EEC-CCGT-------T-S-CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT-STTTS--------S--
T ss_pred             ccH-Hhhc-------cCCCCCCeEEEEeCCCCCcccc-----cchhc---CCCCcceeeeeeeecccccc-----cCC--
Confidence            322 1111       1111234455899999999987     33343   45567789999999844432     221  


Q ss_pred             CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhH---------
Q 019298          233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIM---------  302 (343)
Q Consensus       233 ~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~---------  302 (343)
                      +.+..|.++|+||.-|-+|-|+||.++.|       .++.++|...... +.+++.-+|.-+ ..+|....         
T Consensus       182 ~aD~DiMLFT~SK~TGHAGSR~GWAlVKD-------~~Va~kM~~y~~lnTiGvS~dsQLRa-~kiLk~v~~~~~~~~~~  253 (363)
T PF04864_consen  182 PADHDIMLFTLSKLTGHAGSRFGWALVKD-------EEVAKKMTKYMELNTIGVSRDSQLRA-LKILKVVLDGYGTEKGT  253 (363)
T ss_dssp             -B--SEEEEEHHHHCS-GGG-EEEEEES--------HHHHHHHHHHHHHHCSS--HHHHHHH-HHHHHHHHHHCCHHTTT
T ss_pred             CCCCceEEEEEecccCccccccceeeecC-------HHHHHHHHHHHHHhcccCcHHHHHHH-HHHHHHHHhcccCCCCc
Confidence            12334999999999999999999999964       6788888877543 567888888766 34443210         


Q ss_pred             -HHHH-HHHHHHHHHHHHHHhhcCC
Q 019298          303 -QIMI-HGNFLENFAGSCVPSYKLI  325 (343)
Q Consensus       303 -~~l~-~~~~~~~~~~~~~~~L~~~  325 (343)
                       .+.+ -++.+++|.+.+.+.+..-
T Consensus       254 ~~~F~f~~~~M~~RW~~L~~~~~~S  278 (363)
T PF04864_consen  254 EDIFHFGYSTMRERWEKLRAAVSAS  278 (363)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHhc
Confidence             1333 6677888888888888764

Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.

>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional

Probab=99.47  E-value=1.9e-11  Score=114.81  Aligned_cols=268  Identities=15%  Similarity=0.106  Sum_probs=157.1

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++++|+..|.-.  ..++ .+|.+.+++++++..... ..|-.    .+.+..+++.+....  +-..+.+++++++++
T Consensus        81 G~~ylD~~~g~~~--~~lGH~~p~v~~Ai~~ql~~l~~~~~~~~----~~~~~~lae~L~~~~--p~~~~~v~f~~SGsE  152 (459)
T PRK11522         81 GQEFIDCLGGFGI--FNVGHRNPVVVSAVQNQLAKQPLHSQELL----DPLRAMLAKTLAALT--PGKLKYSFFCNSGTE  152 (459)
T ss_pred             CCEEEECCcCHHh--hhcCCCCHHHHHHHHHHHhhCcccccccC----CHHHHHHHHHHHHhC--CCCCCEEEEeCCchH
Confidence            7888999877422  1233 789999999999875321 12222    334444555543322  223468999999999


Q ss_pred             HHHHHHHHhcC----CC-CeEEEeCCCCcchHHHHHhc-CceeEE---eecCCCCC--CCCCHHHHHhhhcC-----Cce
Q 019298          112 AIDVAMALLSR----PG-ANILLPRPGFPIYELSAAFR-HIEVRH---FDLLPDKG--WEVDLDDIESLADQ-----NTV  175 (343)
Q Consensus       112 al~~~~~~l~~----~g-d~vl~~~p~~~~~~~~~~~~-g~~~~~---~~~~~~~~--~~~d~~~l~~~~~~-----~~~  175 (343)
                      |++.+++....    +| ..|+...-+|++....+... +.....   .+..+.-.  .-.|.+.+++.+..     +..
T Consensus       153 Ave~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i  232 (459)
T PRK11522        153 SVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDV  232 (459)
T ss_pred             HHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcE
Confidence            99999987531    22 46888888887765444332 211111   11111000  00257777776642     223


Q ss_pred             EEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCC-C
Q 019298          176 ALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-W  252 (343)
Q Consensus       176 ~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~  252 (343)
                      +.++..| ....|.. .+.+.++++.++|++||+++|+||++.++...+.. .....++-.+. |+  +++|.++ .| +
T Consensus       233 AavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~-~a~e~~gv~PD-iv--t~gK~lg-gG~~  307 (459)
T PRK11522        233 AAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKM-FACEHENVQPD-IL--CLAKALG-GGVM  307 (459)
T ss_pred             EEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchh-hhhhccCCCCC-EE--Eechhhh-CCCc
Confidence            4455555 6667776 46778999999999999999999999876444431 11122222222 33  7899975 46 6


Q ss_pred             cEEEEEEeCCCCCCCchHHHHHHhhh---hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC
Q 019298          253 RLGWFVTTDPCGMFRKPKVVERMKKY---FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       253 r~G~i~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~  324 (343)
                      .+|.+++.+        ++.+.+...   ...++..++.+.+++ .+.|+...+ .+..++++++-+.+.+.|++
T Consensus       308 Pigav~~~~--------~i~~~~~~~~~~~~~T~~gnp~~~Aaa-la~L~~i~~-~~l~~~~~~~g~~l~~~L~~  372 (459)
T PRK11522        308 PIGATIATE--------EVFSVLFDNPFLHTTTFGGNPLACAAA-LATINVLLE-QNLPAQAEQKGDYLLDGFRQ  372 (459)
T ss_pred             cceeEEEcH--------HHHHHhccCCcccCCCCCCCHHHHHHH-HHHHHHHhc-chHHHHHHHHHHHHHHHHHH
Confidence            899988853        566655321   222445577776666 444432110 01556666666666666654

>PRK13578 ornithine decarboxylase; Provisional

Probab=99.46  E-value=8.2e-12  Score=120.66  Aligned_cols=166  Identities=13%  Similarity=0.147  Sum_probs=117.4

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH-HHhcCceeEEeecCCCC
Q 019298           79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS-AAFRHIEVRHFDLLPDK  157 (343)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~-~~~~g~~~~~~~~~~~~  157 (343)
                      ..+..+.+|+.|+       .....++++|+|.++..++.+++.+||+|++++.||-+..+. +...|+..+++...- +
T Consensus       176 i~eAq~~AA~~fg-------Ad~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~-n  247 (720)
T PRK13578        176 AKDAQKHAAKVFN-------ADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETAR-N  247 (720)
T ss_pred             HHHHHHHHHHHhC-------CCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccc-c
Confidence            3566677777773       234667899999999999999999999999999999998885 788999999987544 2


Q ss_pred             CCC----CCH-----HHHHhhhcCC----------ceEEEEeCCCCCcccccCHHHHHHHHHH-HhhcCcEEEEccCCCc
Q 019298          158 GWE----VDL-----DDIESLADQN----------TVALVIINPGNPCGNVYSYQHLQKLAET-ANKLKTLVIADEVYGH  217 (343)
Q Consensus       158 ~~~----~d~-----~~l~~~~~~~----------~~~i~~~~p~nptG~~~~~~~l~~l~~~-~~~~~~~~i~D~ay~~  217 (343)
                      .++    ++.     +.+++++.+.          .+++++++|+. .|.+++   +++|+++ ++.++ .+++||||+.
T Consensus       248 ~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~~~~h~~~-~llvDEAhga  322 (720)
T PRK13578        248 PFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVDKIGHLCD-YILFDSAWVG  322 (720)
T ss_pred             ccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeec---HHHHHHHhhccCC-cEEEeCcchh
Confidence            333    354     4477777543          36777777754 788854   5677776 56777 9999999997


Q ss_pred             c-ccCCC--CCCcc-cccCC-CCCEEEEccCccccCCCCCcEEEEEE
Q 019298          218 L-VFGDK--PFVPM-GVFGS-TVPILTLGSLSKRWIVPGWRLGWFVT  259 (343)
Q Consensus       218 ~-~~~~~--~~~~~-~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~  259 (343)
                      . .|...  ..++. ..... +.-++++.|.+|.  ++++.-+.++-
T Consensus       323 h~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKt--L~alTQaS~LH  367 (720)
T PRK13578        323 YEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQ--QAGFSQTSQIH  367 (720)
T ss_pred             hhccCcccccCChhhhhcCCCCCCeEEEEChhhc--chhhhhHhhhh
Confidence            5 33321  12211 11222 3457999999999  67776676543

>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.45  E-value=2.7e-11  Score=112.91  Aligned_cols=266  Identities=13%  Similarity=0.026  Sum_probs=152.7

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++.++|+..|.-.  ..++ .+|.+.+++++++.......+.     .+.+..+++.+....  +...+.+.+++++++
T Consensus        51 dG~~yiD~~~g~~~--~~lGh~~p~v~~ai~~q~~~~~~~~~~-----~~~~~~la~~L~~~~--~~~~~~v~f~~SGsE  121 (433)
T PRK00615         51 LGKTFIDFCGSWGS--LIHGHSHPKICDAIQQGAERGTSYGLT-----SEQEILFAEELFSYL--GLEDHKIRFVSSGTE  121 (433)
T ss_pred             CCCEEEEcccchhc--cccCCCCHHHHHHHHHHHHhCCCCCCC-----CHHHHHHHHHHHHhC--CCCcCEEEEeCchHH
Confidence            38899999888633  1233 7899999999998764321221     123344444443322  222368999999999


Q ss_pred             HHHHHHHHhcC--CCCeEEEeCCCCcchHHH---HHhcCc-e---e-EEeecCCCCC-----CCCCHHHHHhhhcC--Cc
Q 019298          112 AIDVAMALLSR--PGANILLPRPGFPIYELS---AAFRHI-E---V-RHFDLLPDKG-----WEVDLDDIESLADQ--NT  174 (343)
Q Consensus       112 al~~~~~~l~~--~gd~vl~~~p~~~~~~~~---~~~~g~-~---~-~~~~~~~~~~-----~~~d~~~l~~~~~~--~~  174 (343)
                      |++.+++....  ...+|+...-+|+++...   ....+. .   . ......+...     ..-|++.+++.+..  +.
T Consensus       122 A~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~  201 (433)
T PRK00615        122 ATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHR  201 (433)
T ss_pred             HHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCc
Confidence            99999987642  235788888888775421   111110 0   0 0000000000     00167888887743  22


Q ss_pred             eEEEEeCC-CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCC
Q 019298          175 VALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW  252 (343)
Q Consensus       175 ~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~  252 (343)
                      .+.++..| ....|... +.+.+++|.++|++||+++|+||++.++. .+.. .....++-.+. |+  +++|.++ .|.
T Consensus       202 ~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R-~G~~-ga~~~~gv~PD-i~--~~gK~lg-gG~  275 (433)
T PRK00615        202 VAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFR-VAQG-GAAAIYHVKPD-IT--VYGKILG-GGL  275 (433)
T ss_pred             eEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccccc-ccHh-HHHHhcCCCCC-eE--EEccccc-CCc
Confidence            34455556 55667765 57889999999999999999999998763 3321 11111222222 33  4899975 568


Q ss_pred             cEEEEEEeCCCCCCCchHHHHHHhhh----hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhc
Q 019298          253 RLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYK  323 (343)
Q Consensus       253 r~G~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~  323 (343)
                      .+|+++++.        ++.+.+...    ...++..++...+++ .+.|+...+ -+.+++++++-+.+.+.|+
T Consensus       276 p~~av~~~~--------~i~~~~~~~~~~~~~~T~~g~p~~~aa~-la~L~~i~~-~~~~~~~~~~g~~l~~~l~  340 (433)
T PRK00615        276 PAAAVVAHK--------SIMDHLAPEGTIFQAGTLSGNPLAMAAG-KASINLCRE-QGFYTQLSTLEQNFLSPIE  340 (433)
T ss_pred             ceeeeeecH--------HHHhhhcCCCCcccCCCCcccHHHHHHH-HHHHHHHhc-ccHHHHHHHHHHHHHHHHH
Confidence            889998853        677766432    112344577766666 444431100 0145555555555544443

>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.45  E-value=3.8e-11  Score=112.31  Aligned_cols=266  Identities=16%  Similarity=0.094  Sum_probs=158.3

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++.++|+..|.-..  .++ .+|.+.+++++++.......+.     .+.+..+++.+.....   ..+.+++++++++
T Consensus        51 dG~~ylD~~~g~~~~--~lGh~~p~v~~ai~~q~~~~~~~~~~-----~~~~~~la~~l~~~~p---~~~~v~f~~sGse  120 (428)
T PRK12389         51 DGNKYIDYLAAYGPI--ITGHAHPHITKAITEAAENGVLYGTP-----TELEIEFAKMLKEAIP---SLEKVRFVNSGTE  120 (428)
T ss_pred             CCCEEEEcccccccc--ccCCCCHHHHHHHHHHHHhCCccCCC-----CHHHHHHHHHHHHhCC---CCcEEEEeCCHHH
Confidence            388899998886332  233 7899999999998764322221     2334445555543221   2479999999999


Q ss_pred             HHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhc-CceeE--------EeecC-CCCC---CCCCHHHHHhhhcC--Cc
Q 019298          112 AIDVAMALLSR--PGANILLPRPGFPIYELSAAFR-HIEVR--------HFDLL-PDKG---WEVDLDDIESLADQ--NT  174 (343)
Q Consensus       112 al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~-g~~~~--------~~~~~-~~~~---~~~d~~~l~~~~~~--~~  174 (343)
                      |++.+++....  ...+|+...-+|++....+... +....        .++.. ..+.   ...|++.+++.+..  +.
T Consensus       121 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~  200 (428)
T PRK12389        121 AVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDE  200 (428)
T ss_pred             HHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCc
Confidence            99999987532  2367888888887765443332 21110        00000 0000   01267888887742  22


Q ss_pred             eEEEEeCC-CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCC
Q 019298          175 VALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW  252 (343)
Q Consensus       175 ~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~  252 (343)
                      .+.++..| .+..|.+. +.+.+++|.++|++||+++|+||++.++.. +.. .....++-.++ |  .+++|.++ .|+
T Consensus       201 vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt-~~~-~a~~~~gv~PD-i--vt~gK~lg-gG~  274 (428)
T PRK12389        201 VAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRF-MYG-GAQDLLGVEPD-L--TALGKIIG-GGL  274 (428)
T ss_pred             EEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccccc-Ccc-hhhHHhCCCCC-e--eeechhhc-CCC
Confidence            34444555 66677664 678999999999999999999999998732 211 01111121222 3  36799974 579


Q ss_pred             cEEEEEEeCCCCCCCchHHHHHHhhh----hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC
Q 019298          253 RLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       253 r~G~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~  324 (343)
                      .+|.++++        +++.+.+...    ...++..++++.+++ .+.|+...+ .+..++++++-+++.+.|++
T Consensus       275 Pi~av~~~--------~~i~~~~~~~~~~~~~~T~~gnpl~~Aaa-la~L~~l~~-~~l~~~~~~~g~~l~~~L~~  340 (428)
T PRK12389        275 PIGAYGGR--------KDIMEQVAPLGPAYQAGTMAGNPASMAAG-IACLEVLQQ-EGVYEKLDRLGAMLEEGILE  340 (428)
T ss_pred             ceeEEeEH--------HHHHhhhccCCCcccccCCccCHHHHHHH-HHHHHHHhc-ccHHHHHHHHHHHHHHHHHH
Confidence            99999874        3677766421    222456677776666 444432100 01555666666666665553

>PRK06105 aminotransferase; Provisional

Probab=99.44  E-value=3.5e-11  Score=113.26  Aligned_cols=269  Identities=17%  Similarity=0.135  Sum_probs=157.7

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEK-FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  110 (343)
                      +++.++||..|.-..  .++ .+|++.+++++++++.. .+...  ....+.+..+++.+.+..  +-..+.++++++++
T Consensus        46 dG~~ylD~~~g~~~~--~lGh~~p~i~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~--p~~~~~v~f~~SGs  119 (460)
T PRK06105         46 AGKRYIEGMAGLWSV--ALGFSEQRLVEAAARQMKKLPFYHTFS--HKSHGPVIDLAEKLVAMA--PVPMSKVFFTNSGS  119 (460)
T ss_pred             CCCEEEEcchhHHhc--cCCCCCHHHHHHHHHHHHhCCCeeccc--ccCCHHHHHHHHHHHHhC--CCCCCEEEEeCCcH
Confidence            388999998886332  233 68999999999987532 11110  112233444555554322  22346899999999


Q ss_pred             HHHHHHHHHhc------C-C-CCeEEEeCCCCcchHHHHHhc-Cce------------eEEeecCCCCCCCC--------
Q 019298          111 QAIDVAMALLS------R-P-GANILLPRPGFPIYELSAAFR-HIE------------VRHFDLLPDKGWEV--------  161 (343)
Q Consensus       111 ~al~~~~~~l~------~-~-gd~vl~~~p~~~~~~~~~~~~-g~~------------~~~~~~~~~~~~~~--------  161 (343)
                      +|++.+++...      . + ..+|+...-+|++....+... +..            +..++..  +.+..        
T Consensus       120 eAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~  197 (460)
T PRK06105        120 EANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCP--HYYRFGLPGESEE  197 (460)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCC--cccccccCCCChH
Confidence            99999998752      1 2 257888888887654333221 111            1111111  10000        


Q ss_pred             -----CHHHHHhhhc---CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccccc
Q 019298          162 -----DLDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF  231 (343)
Q Consensus       162 -----d~~~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~  231 (343)
                           ..+++++.+.   .+..+.++.-| ....|.. .+.+.++++.++|++||+++|+||++.++...+.-. ....+
T Consensus       198 ~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f-~~~~~  276 (460)
T PRK06105        198 AFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMF-GCETF  276 (460)
T ss_pred             HHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhh-hHHhc
Confidence                 1345666653   23334555556 5666766 588999999999999999999999998875444321 12222


Q ss_pred             CCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh--------hccccCcchHHHHHHHhccchhhHH
Q 019298          232 GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQVCIMYGCLSTIMQ  303 (343)
Q Consensus       232 ~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~~l~~~~~  303 (343)
                      +-.++ |  .+++|.++...+.+|.+++++        ++.+.+...        ...+++.++++.+++ .+.|+   .
T Consensus       277 ~v~PD-i--~~~gK~lggG~~P~~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa-~a~L~---~  341 (460)
T PRK06105        277 GIKPD-I--LVMSKQLSSSYQPLSAVLMNE--------KVYDPIADESGKIGTFGHGFTASGHPVAAAVA-LENLA---I  341 (460)
T ss_pred             CCCCC-e--eeeecccccCcccceEEEEcH--------HHHHHHhcccccCcccccCCCCCCCHHHHHHH-HHHHH---H
Confidence            22222 2  367999765446899999853        566666431        123556777777666 34332   1


Q ss_pred             HHH--HHHHHHHHHHHHHHhhcCC
Q 019298          304 IMI--HGNFLENFAGSCVPSYKLI  325 (343)
Q Consensus       304 ~l~--~~~~~~~~~~~~~~~L~~~  325 (343)
                      +.+  ..++.+++-+.+.+.|+++
T Consensus       342 i~~~~l~~~v~~~g~~l~~~L~~l  365 (460)
T PRK06105        342 IEERDLVGNAAERGARLQARLRAL  365 (460)
T ss_pred             HHhccHHHHHHHHHHHHHHHHHHh
Confidence            212  5566666666666655543

>TIGR01364 serC_1 phosphoserine aminotransferase

Probab=99.44  E-value=3.1e-11  Score=109.73  Aligned_cols=245  Identities=12%  Similarity=-0.003  Sum_probs=153.9

Q ss_pred             CcHHHHHHHHHHHhc---CCCCCCCCCCCCH---HHHHHHHHHHhhhCCCCCCCCcEEEecC-hHHHHHHHHHHhcCCCC
Q 019298           53 TTHVATEAVAEALLS---EKFNGYAPTAGLP---LTRRAIAEYLSRDLPYKLTPNDVFVTSG-CTQAIDVAMALLSRPGA  125 (343)
Q Consensus        53 ~~~~~~~~~~~~~~~---~~~~~Y~~~~g~~---~lr~~ia~~~~~~~~~~~~~~~i~~~~g-~~~al~~~~~~l~~~gd  125 (343)
                      .|..+.+++.+.+.+   .....|....-.+   ++-+.+.+.+++.++. -..++|++++| ++.+++.++..+..+|+
T Consensus         3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~-~~~~~v~~~~gsgT~a~ea~~~nl~~~~~   81 (349)
T TIGR01364         3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNI-PDNYEVLFLQGGATGQFAAVPLNLLAEGK   81 (349)
T ss_pred             CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCC-CCCceEEEEcCCchHHHHHHHHhcCCCCC
Confidence            467788888888763   1222332222223   3333333333333332 12347888866 99999999999998999


Q ss_pred             eEEEeCCCCcc--hHHHHHhcCceeEEeecCCC--CCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHH
Q 019298          126 NILLPRPGFPI--YELSAAFRHIEVRHFDLLPD--KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET  201 (343)
Q Consensus       126 ~vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~  201 (343)
                      ++++..-+..+  +...++..|. +..+...+.  .+..+++++++.  +++++.|.+++..+.||+..+        ++
T Consensus        82 ~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~th~ETstGv~~~--------~l  150 (349)
T TIGR01364        82 VADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWEI--SEDAAYVHYCANETIHGVEFR--------EL  150 (349)
T ss_pred             eEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcCC--CCCCCEEEEcCCCCcccEecc--------ee
Confidence            98877666643  3556777788 666654322  223456665552  457889999999999999864        55


Q ss_pred             HhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh----
Q 019298          202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK----  277 (343)
Q Consensus       202 ~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~----  277 (343)
                      ++.+++++++|.+.+..    ..+..+..+   +  +++.|..|.||.+|  +|.+.+++        +.++++..    
T Consensus       151 ~~~~~~l~iVDavss~g----~~~id~~~~---d--~~~~ssqK~lgP~G--lg~l~~s~--------~~~~~~~~~~~~  211 (349)
T TIGR01364       151 PDVKNAPLVADMSSNIL----SRPIDVSKF---G--LIYAGAQKNIGPAG--LTVVIVRK--------DLLGRASRITPS  211 (349)
T ss_pred             cccCCCeEEEEcccccc----CccCCHHHc---c--EEEEecccccCCCc--eEEEEECH--------HHHhhcccCCCC
Confidence            66789999999998862    222333322   2  88899999998777  78888764        33332211    


Q ss_pred             -------h--hccccCcchHHHHHHHhccchhhHHH--HH-HHHHHHHHHHHHHHhhcCCCCce
Q 019298          278 -------Y--FDILGDPATFIQVCIMYGCLSTIMQI--MI-HGNFLENFAGSCVPSYKLIPELI  329 (343)
Q Consensus       278 -------~--~~~~~~~~~~~~~a~~~~~l~~~~~~--l~-~~~~~~~~~~~~~~~L~~~~g~~  329 (343)
                             .  ....+.++.....++ .++|+...+.  ++ ..++.++..+.+++.|++++|+.
T Consensus       212 ~~~~~~~~~~~~~~~Tp~~~~i~al-~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~  274 (349)
T TIGR01364       212 MLNYKIHAENDSMYNTPPTFAIYVS-GLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFY  274 (349)
T ss_pred             cchHHHHHhcCCCCCCCcHHHHHHH-HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence                   1  111223343333443 5555533222  33 88888999999999999997764

This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).

>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase

Probab=99.44  E-value=1.2e-10  Score=110.53  Aligned_cols=255  Identities=15%  Similarity=0.125  Sum_probs=160.2

Q ss_pred             HHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCC-C--------CCC--CcEEEecChHHHHHHHHHHhcC-------
Q 019298           61 VAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY-K--------LTP--NDVFVTSGCTQAIDVAMALLSR-------  122 (343)
Q Consensus        61 ~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~-~--------~~~--~~i~~~~g~~~al~~~~~~l~~-------  122 (343)
                      +...+..+ ...|...+...++++.+.+|+.+..+. +        -.+  ..-++|+|+|+++..++....+       
T Consensus       110 l~~~lN~n-~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~  188 (522)
T TIGR03799       110 LMVALNQN-LVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADG  188 (522)
T ss_pred             HHHHhcCC-cceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccc
Confidence            44444433 234555567789999999999875431 1        011  2347789999988887655321       


Q ss_pred             -------------------CCCeEEEeCCCCcchHHHHHhcCc---eeEEeecCCCCCCCCCHHHHHhhhc----CCceE
Q 019298          123 -------------------PGANILLPRPGFPIYELSAAFRHI---EVRHFDLLPDKGWEVDLDDIESLAD----QNTVA  176 (343)
Q Consensus       123 -------------------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~  176 (343)
                                         ++..|++.+-.|.+....+...|+   +++.++++  .++.+|+++|++.++    .+++.
T Consensus       189 ~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d--~~g~~d~~~L~~~i~~~~~~g~~~  266 (522)
T TIGR03799       189 DFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTD--ANNRIDVDALRDKCAELAEQNIKP  266 (522)
T ss_pred             cccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeC--CCCcCCHHHHHHHHHHHHHCCCCc
Confidence                               134688889999999999999988   67888875  356799999999885    34444


Q ss_pred             EEEe--CCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCC-cccccCCCCCEEEEccCccccCCCCCc
Q 019298          177 LVII--NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWR  253 (343)
Q Consensus       177 i~~~--~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~-~~~~~~~~~~~i~~~S~sK~~~~~G~r  253 (343)
                      ++++  ..++.||.+   +++++|+++|+++|+++++|.+|++...-..... .+..+.  .-..++.|.+|.+..| ..
T Consensus       267 ~~vvataGtt~tGai---Dpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle--~aDSit~d~HK~l~~P-~g  340 (522)
T TIGR03799       267 LAIVGVAGTTETGNI---DPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIE--RADSVTIDAHKQLYVP-MG  340 (522)
T ss_pred             EEEEEEecCcCCCCc---CCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCch--hCCEEEEChhhcCCcC-cc
Confidence            4443  446799999   7889999999999999999999997432211110 011111  1237788999974332 44


Q ss_pred             EEEEEEeCCCCCCCchHHHHHHhhhh--------------ccccCcchHHHHHHHhccchh--hHHHHHHHHHHHHHHHH
Q 019298          254 LGWFVTTDPCGMFRKPKVVERMKKYF--------------DILGDPATFIQVCIMYGCLST--IMQIMIHGNFLENFAGS  317 (343)
Q Consensus       254 ~G~i~~~~~~~~~~~~~~~~~l~~~~--------------~~~~~~~~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~~  317 (343)
                      +|.+++.++       .+.+.+....              .+..+-+..+ ..+ ...|+.  ...+-+..++..+..++
T Consensus       341 ~G~llvr~~-------~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~a-l~l-w~aL~~lG~~G~~~ii~~~~~la~~  411 (522)
T TIGR03799       341 AGMVLFKDP-------ALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMA-MLV-YAGLHIIGRKGYELLIDQSIEKAKY  411 (522)
T ss_pred             cEEEEEeCH-------HHHHHhccCcchhcCCCCCccccceeecCcchHH-HHH-HHHHHHHhHHHHHHHHHHHHHHHHH
Confidence            788888653       3333333210              0111111111 111 222221  12222377788888999


Q ss_pred             HHHhhcCCCCceeeCC
Q 019298          318 CVPSYKLIPELINFKS  333 (343)
Q Consensus       318 ~~~~L~~~~g~~~~~~  333 (343)
                      +.+.|++.|+++++.+
T Consensus       412 l~~~L~~~~~~el~~~  427 (522)
T TIGR03799       412 FADLIQQQPDFELVTE  427 (522)
T ss_pred             HHHHHhhCCCeEEecC
Confidence            9999999889995443

This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).

>PLN02760 4-aminobutyrate:pyruvate transaminase

Probab=99.44  E-value=6e-11  Score=112.54  Aligned_cols=270  Identities=18%  Similarity=0.124  Sum_probs=158.0

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      ++++++||..|.-.... -..+|++.+++++++.+... +.+  ..+..+....+++.+.+.+. +...+.+++++++++
T Consensus        87 dG~~ylD~~sg~~~~~l-Gh~hp~v~~Av~~ql~~~~~~~~~--~~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~SGsE  162 (504)
T PLN02760         87 NGKKYLDALAGLWCTAL-GGSEPRLVAAATEQLNKLPFYHSF--WNRTTKPSLDLAKELLEMFT-ARKMGKVFFTNSGSE  162 (504)
T ss_pred             CCCEEEEcCcCHHhccc-CCCCHHHHHHHHHHHhhccceecc--cccCcHHHHHHHHHHHhhcC-CCCCCEEEEeCChHH
Confidence            38899999987633222 23789999999999875321 111  01223445555555433211 122357899999999


Q ss_pred             HHHHHHHHhc------C-CC-CeEEEeCCCCcchHHHHHh-cCce------------eEEeecCCCCCCC----------
Q 019298          112 AIDVAMALLS------R-PG-ANILLPRPGFPIYELSAAF-RHIE------------VRHFDLLPDKGWE----------  160 (343)
Q Consensus       112 al~~~~~~l~------~-~g-d~vl~~~p~~~~~~~~~~~-~g~~------------~~~~~~~~~~~~~----------  160 (343)
                      |+..+++...      . ++ .+|+..+-+|++....+.. .|..            +..++..  +.+.          
T Consensus       163 A~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~  240 (504)
T PLN02760        163 ANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCP--HYWRFHLPGETEEE  240 (504)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCC--cccccCCCCCcHHH
Confidence            9999999763      1 22 5788888888765433322 2221            1111110  1000          


Q ss_pred             ---CCHHHHHhhhc---CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298          161 ---VDLDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (343)
Q Consensus       161 ---~d~~~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~  232 (343)
                         ...+.+++.+.   .+..+.++.-| ....|.+ .+.+.+++|.++|++||+++|+||++.+|...+... ....++
T Consensus       241 ~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~-a~e~~g  319 (504)
T PLN02760        241 FSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMF-GCDKYN  319 (504)
T ss_pred             HHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhh-HHHhcC
Confidence               01234666553   13344555556 5666766 567899999999999999999999998875444321 122222


Q ss_pred             CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh--------hhccccCcchHHHHHHHhccchhhHHH
Q 019298          233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK--------YFDILGDPATFIQVCIMYGCLSTIMQI  304 (343)
Q Consensus       233 ~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~~~a~~~~~l~~~~~~  304 (343)
                      -.+.   +.+++|.++...+.+|.++++.        ++.+.+..        ....+++.+|++.+++ .+.|+   .+
T Consensus       320 v~PD---ivtlgK~lggG~~PigAv~~~~--------~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaa-la~Le---~i  384 (504)
T PLN02760        320 IKPD---LVSLAKALSSAYMPIGAVLVSP--------EISDVIHSQSNKLGSFAHGFTYSGHPVSCAVA-LEALK---IY  384 (504)
T ss_pred             CCCc---EEEecccccCCccccceEeecH--------HHHhhhhcccccccCcccCCCCCCCHHHHHHH-HHHHH---HH
Confidence            2222   3567999754336899988853        56666643        1223556677777776 44432   12


Q ss_pred             HH--HHHHHHHHHHHHHHhhcC
Q 019298          305 MI--HGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       305 l~--~~~~~~~~~~~~~~~L~~  324 (343)
                      .+  ..++++++-+.+.+.|+.
T Consensus       385 ~~~~l~~~~~~~g~~l~~~L~~  406 (504)
T PLN02760        385 KERNIPEHVNKIAPRFQDGIKA  406 (504)
T ss_pred             HhCCHHHHHHHHHHHHHHHHHH
Confidence            12  566666666666666654

>PRK07046 aminotransferase; Validated

Probab=99.44  E-value=4.6e-11  Score=112.08  Aligned_cols=259  Identities=15%  Similarity=0.108  Sum_probs=154.4

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      ++.+|||..|.-.  ..++ .+|.+.++++++++......++     .+....+++.+.+..    ..+.+.+++++++|
T Consensus        74 G~~yiD~~~g~g~--~~lGh~~p~i~~Av~~q~~~~~~~~~~-----~~~~~~lAe~l~~~~----~~~~v~F~nSGtEA  142 (453)
T PRK07046         74 GHRYDDFCLGDTG--AMFGHSPAPVARALAEQARRGLTTMLP-----SEDAAWVGEELARRF----GLPYWQVATTATDA  142 (453)
T ss_pred             CCEEEEecccccc--cccCCCCHHHHHHHHHHHHhCCCCCCC-----CHHHHHHHHHHHHHh----CCCEEEEECCHHHH
Confidence            8889999877632  1233 7899999999999865432222     244455555554422    35799999999999


Q ss_pred             HHHHHHHhcC--CCCeEEEeCCCCcchHHHHHh--cCceeEE------ee--cCCC---CCCCCCHHHHHhhhcCCceEE
Q 019298          113 IDVAMALLSR--PGANILLPRPGFPIYELSAAF--RHIEVRH------FD--LLPD---KGWEVDLDDIESLADQNTVAL  177 (343)
Q Consensus       113 l~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~--~g~~~~~------~~--~~~~---~~~~~d~~~l~~~~~~~~~~i  177 (343)
                      ...+++....  ..++|+..+-+|+++......  .+.....      ++  ....   -.| -|++.+++.+..+..+.
T Consensus       143 ~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~~vAa  221 (453)
T PRK07046        143 NRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-NDLAALEAALADGDVAA  221 (453)
T ss_pred             HHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-CCHHHHHHHhCCCCeEE
Confidence            9999887531  236888888888886432211  1100000      00  0000   001 17889998885444455


Q ss_pred             EEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEE
Q 019298          178 VIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG  255 (343)
Q Consensus       178 ~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G  255 (343)
                      ++..| ....|.+ .+.+.++++.++|++||+++|.||+.. |..+-....  ..++-.+. ++  +++|.++ .|+.+|
T Consensus       222 vi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg~~--~~~gv~PD-i~--t~gK~lg-gG~Pi~  294 (453)
T PRK07046        222 VLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGYT--RAHGLEPD-FL--VVGKPIA-GGVPCA  294 (453)
T ss_pred             EEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcchh--HHhCCCcc-ce--eehhhhc-CCCcce
Confidence            66667 4444544 566899999999999999999999986 322111111  11222222 33  4799965 579999


Q ss_pred             EEEEeCCCCCCCchHHHHHHhhh----------hccccCcchHHHHHHHhccchhhHHHHH--HHHHHHHHHHHHHHhhc
Q 019298          256 WFVTTDPCGMFRKPKVVERMKKY----------FDILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLENFAGSCVPSYK  323 (343)
Q Consensus       256 ~i~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~~~~~~~~~~L~  323 (343)
                      .++++        +++.+.+...          ...+++.++++.+++ .+.|+.   +.+  ..++++++-+.+.+.|+
T Consensus       295 av~g~--------~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~-~a~L~~---l~~~~~~~~~~~~g~~l~~~L~  362 (453)
T PRK07046        295 VYGFS--------AELAERAQAAKASAPPGHSGIGTTLSANALAMAAM-RATLAE---VMTEAAYAHMLALAARLAAGLR  362 (453)
T ss_pred             eeeeh--------HHHHHHHhhccccCCCCCceeCCCCcccHHHHHHH-HHHHHH---HhcccHHHHHHHHHHHHHHHHH
Confidence            98885        3666666421          122456677776666 444331   111  44455555555555444

>PRK05965 hypothetical protein; Provisional

Probab=99.44  E-value=3.5e-11  Score=113.23  Aligned_cols=269  Identities=15%  Similarity=0.105  Sum_probs=157.7

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  110 (343)
                      +++.++|+..|.-..  +++ .+|++.+++++++..... ..+.  ....+.+..+++.+....  +-+.+.++++++++
T Consensus        44 dG~~ylD~~~g~~~~--~lGh~~p~i~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~--p~~~~~v~f~~sGS  117 (459)
T PRK05965         44 SGHQLLDAFAGLWCV--NVGYGQESIVEAAAEQMRELPYATGYF--HFGSEPAIRLAAKLAERA--PGSLNHVYFTLGGS  117 (459)
T ss_pred             CCCEEEECcccHHhc--cCCCCCHHHHHHHHHHHHhcCCccccc--ccCCHHHHHHHHHHHhhC--CCCcCEEEEeCChh
Confidence            488999998775331  233 689999999999875321 1110  011233344455443322  22346899999999


Q ss_pred             HHHHHHHHHhcC-------C-CCeEEEeCCCCcchHHHHHhc-Cce------------eEEeecCCC--CCCCCC-----
Q 019298          111 QAIDVAMALLSR-------P-GANILLPRPGFPIYELSAAFR-HIE------------VRHFDLLPD--KGWEVD-----  162 (343)
Q Consensus       111 ~al~~~~~~l~~-------~-gd~vl~~~p~~~~~~~~~~~~-g~~------------~~~~~~~~~--~~~~~d-----  162 (343)
                      +|++.+++....       + ..+|+...-+|++....+... +..            +..++....  ..+.-|     
T Consensus       118 EAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (459)
T PRK05965        118 DAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAII  197 (459)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHH
Confidence            999999987531       2 257888888887764332221 110            111211100  001112     


Q ss_pred             ---HHHHHhhhcC---CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC
Q 019298          163 ---LDDIESLADQ---NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST  234 (343)
Q Consensus       163 ---~~~l~~~~~~---~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~  234 (343)
                         ++.+++.+..   +..+.++..| +...|.. .+.+.++++.++|++||+++|.||++.+|...+.- .....++-.
T Consensus       198 ~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~-~a~~~~gv~  276 (459)
T PRK05965        198 AASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPL-FACEAEGVV  276 (459)
T ss_pred             HHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchh-hhHhhcCCC
Confidence               2566666642   2334455555 5566765 67789999999999999999999999998655432 122222222


Q ss_pred             CCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhh--------hhccccCcchHHHHHHHhccchhhHHHH
Q 019298          235 VPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK--------YFDILGDPATFIQVCIMYGCLSTIMQIM  305 (343)
Q Consensus       235 ~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~~~a~~~~~l~~~~~~l  305 (343)
                      ++++   +++|.++ .| +.+|.+++++        ++.+.+..        ....+++.++++.+++ .+.|+   .+.
T Consensus       277 PDiv---~~gKgl~-gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa-~a~L~---~l~  340 (459)
T PRK05965        277 PDLM---TVAKGLT-SGYVPMGAVLMSD--------HVYQGIADGAGAAAPVGHGYTYSAHPVSAAVG-LEVLR---LYH  340 (459)
T ss_pred             CCeE---Eechhhc-cCCcceeEEEEcH--------HHHHHHhccccccccccccCCCCCCHHHHHHH-HHHHH---HHH
Confidence            2333   3599964 57 5999999853        56665542        1223556778777766 33332   111


Q ss_pred             H--HHHHHHHHHHHHHHhhcC
Q 019298          306 I--HGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       306 ~--~~~~~~~~~~~~~~~L~~  324 (343)
                      +  ..++.++.-+.+.+.|++
T Consensus       341 ~~~l~~~~~~~g~~l~~~l~~  361 (459)
T PRK05965        341 EGGLLANGQKAGPRFAAGLDA  361 (459)
T ss_pred             hccHHHHHHHHHHHHHHHHHh
Confidence            2  555666666666666654

>PRK07482 hypothetical protein; Provisional

Probab=99.44  E-value=4.3e-11  Score=112.70  Aligned_cols=268  Identities=15%  Similarity=0.077  Sum_probs=158.9

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEK-FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  110 (343)
                      +++.++|+..|.-..  .++ .+|++.++++++++... .+.+.  ....+.+..+|+.+.+..  +-+.+.++++++++
T Consensus        48 dG~~ylD~~sg~~~~--~lGh~~p~v~~Av~~q~~~~~~~~~~~--~~~~~~~~~lAe~L~~~~--p~~~~~v~f~~sGS  121 (461)
T PRK07482         48 QGRRYIDAFAGLYCV--NVGYGRTEVAEAIAEQAKELAYYHTYV--GHGTEASITLSKRIIDRA--PAGMSKVYYGLSGS  121 (461)
T ss_pred             CCCEEEEcccchhhh--cCCCCCHHHHHHHHHHHHhcCcccccc--ccCCHHHHHHHHHHHHhC--CCCcCEEEEeCchH
Confidence            388999999886442  233 68999999999987642 11110  112344555555554322  22346899999999


Q ss_pred             HHHHHHHHHhc------C-C-CCeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCCCCC---CC------
Q 019298          111 QAIDVAMALLS------R-P-GANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKG---WE------  160 (343)
Q Consensus       111 ~al~~~~~~l~------~-~-gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~---~~------  160 (343)
                      +|++.+++...      . + ..+|+...-+|++....+.....             .+..++......   ..      
T Consensus       122 EAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  201 (461)
T PRK07482        122 DANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQF  201 (461)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHH
Confidence            99999998763      1 1 25788888888775433222111             111111110000   00      


Q ss_pred             --CCHHHHHhhhc-C--CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298          161 --VDLDDIESLAD-Q--NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (343)
Q Consensus       161 --~d~~~l~~~~~-~--~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~  233 (343)
                        -+++.+++.+. .  +..+.++.-| ....|.. .+.+.+++|.++|++||+++|.||++.+|...+... ....++-
T Consensus       202 ~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~-a~~~~gv  280 (461)
T PRK07482        202 SAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMF-GSDHYGI  280 (461)
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchh-hHHhcCC
Confidence              03567777663 1  3345555666 5555766 577899999999999999999999999986554321 1222222


Q ss_pred             CCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhh--------hccccCcchHHHHHHHhccchhhHHH
Q 019298          234 TVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQVCIMYGCLSTIMQI  304 (343)
Q Consensus       234 ~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~~l~~~~~~  304 (343)
                      .++++ +  ++|.++ .| ..+|.+++++        ++.+.+...        ...++..++++.+++ .+.|+   .+
T Consensus       281 ~PDiv-~--~gKgl~-gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa-~a~L~---~~  344 (461)
T PRK07482        281 EPDLI-T--VAKGLT-SAYAPLSGSIVGE--------KVWDVLEQGSDEHGAIGHGWTYSGHPICAAAA-LANLD---IL  344 (461)
T ss_pred             CCCEE-E--Eccccc-cCccccceeeecH--------HHHHHHhcccccCCccccCCCCCcCHHHHHHH-HHHHH---HH
Confidence            23333 3  699964 46 4888888753        565655421        223556778877776 44432   22


Q ss_pred             HH--HHHHHHHHHHHHHHhhc
Q 019298          305 MI--HGNFLENFAGSCVPSYK  323 (343)
Q Consensus       305 l~--~~~~~~~~~~~~~~~L~  323 (343)
                      .+  ..++.++.-+.+.+.|+
T Consensus       345 ~~~~l~~~~~~~g~~l~~~L~  365 (461)
T PRK07482        345 ERENLVGNAAEVGAYFRARLR  365 (461)
T ss_pred             HhCCHHHHHHHHHHHHHHHHH
Confidence            22  45555566666655554

>PRK03080 phosphoserine aminotransferase; Provisional

Probab=99.44  E-value=7.6e-12  Score=115.27  Aligned_cols=248  Identities=17%  Similarity=0.061  Sum_probs=150.0

Q ss_pred             ceeEeccCCCCCCCCCCCcHH-HHHHHHHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCC-CCCcEEEec-ChH
Q 019298           36 KVISLAMGDPTVHSCFHTTHV-ATEAVAEALLSEKFNGYAP--TAGLPLTRRAIAEYLSRDLPYKL-TPNDVFVTS-GCT  110 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~~~~~~~~~~-~~~~i~~~~-g~~  110 (343)
                      ..++|+.|-      ..+++. +++++.......  +...+  ..-..+.|+.+++++      +. ++++|++++ |++
T Consensus        12 ~~~~f~~Gp------~~~~~~~v~~a~~~~~~~~--~hr~~~f~~~~~~~r~~l~~l~------~~~~~~~v~~~~gs~T   77 (378)
T PRK03080         12 ADPRFSSGP------CKKRPGWQLEALADALLGR--SHRQKPVKALLKRVIEGTRELL------SLPEGYEVGIVPGSDT   77 (378)
T ss_pred             CCCCcCCCC------cCCChHHHHHHHHhhhccc--CcCCHHHHHHHHHHHHHHHHHh------CCCCCceEEEECCchH
Confidence            345565553      345666 888887654321  11111  123356777777777      33 345788875 899


Q ss_pred             HHHHHHHHHhcCC-CCeEEEeCCCCcchHH--HHHhcCc-eeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCc
Q 019298          111 QAIDVAMALLSRP-GANILLPRPGFPIYEL--SAAFRHI-EVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC  186 (343)
Q Consensus       111 ~al~~~~~~l~~~-gd~vl~~~p~~~~~~~--~~~~~g~-~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~npt  186 (343)
                      .+++.++.++.++ ++.|+. .-.|+.-..  .++..|. +++.++.+  .+..+|+++++.     ++.|.+++..|.|
T Consensus        78 ~~~~~~~~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~--~g~~~d~~~i~~-----~~~V~~~h~~t~t  149 (378)
T PRK03080         78 GAWEMALWSLLGARRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEAD--YGSLPDLSAVDF-----DRDVVFTWNGTTT  149 (378)
T ss_pred             HHHHHHHHhcCCCCcceEEE-eCHHHHHHHHHHHhhcCCCCceEeccC--CCCCCCHhhcCC-----CCCEEEEecCCcc
Confidence            9999999999874 445544 334443222  2245688 87877654  344567776432     5668889999999


Q ss_pred             ccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCC-CCCcEEEEEEeCCCCC
Q 019298          187 GNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGM  265 (343)
Q Consensus       187 G~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~i~~~~~~~~  265 (343)
                      |...+   +++|++  +++|+++++|.+++...    .+..+..+     .+++.|..|.++. +|  +|++.++.    
T Consensus       150 G~~~p---i~~I~~--~~~g~~~vVDa~qs~G~----~pidv~~i-----D~~~~s~~K~l~~P~G--~g~l~v~~----  209 (378)
T PRK03080        150 GVRVP---VARWIG--ADREGLTICDATSAAFA----LPLDWSKL-----DVYTFSWQKVLGGEGG--HGMAILSP----  209 (378)
T ss_pred             ceecc---chhhcc--ccCCCeEEEeccccccc----CCCCHHHC-----cEEEEehhhhCCCCCc--eEEEEECH----
Confidence            99976   555566  78899999999988732    22223222     3889999999765 66  78877753    


Q ss_pred             CCchHHHHHHhhh----------------------h-ccccCcchH-HHHHHHhccchhhHHH--HH-HHHHHHHHHHHH
Q 019298          266 FRKPKVVERMKKY----------------------F-DILGDPATF-IQVCIMYGCLSTIMQI--MI-HGNFLENFAGSC  318 (343)
Q Consensus       266 ~~~~~~~~~l~~~----------------------~-~~~~~~~~~-~~~a~~~~~l~~~~~~--l~-~~~~~~~~~~~~  318 (343)
                          +.++++...                      . ..+.+.++. ...++ .++|+...+.  ++ .+++.+++.+.+
T Consensus       210 ----~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l-~~al~~l~~~gG~e~i~~r~~~l~~~l  284 (378)
T PRK03080        210 ----RAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDY-LDQLDWANSIGGLDALIARTAANASVL  284 (378)
T ss_pred             ----HHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHH-HHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence                344433311                      0 001122222 22222 3333322221  22 677888888899


Q ss_pred             HHhhcCCCCcee
Q 019298          319 VPSYKLIPELIN  330 (343)
Q Consensus       319 ~~~L~~~~g~~~  330 (343)
                      .+.|++++++.+
T Consensus       285 ~~~l~~~~~~~~  296 (378)
T PRK03080        285 YDWAEKTPWATP  296 (378)
T ss_pred             HHHHHhCCCccc
Confidence            999988866654

>PRK05639 4-aminobutyrate aminotransferase; Provisional

Probab=99.42  E-value=6e-11  Score=111.43  Aligned_cols=267  Identities=16%  Similarity=0.103  Sum_probs=150.7

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      ++.++|+..|.-.. +.--.+|.+.+++++++++...  ..|..    .+....+++.+....  +...+.+++++++++
T Consensus        52 G~~ylD~~~g~~~~-~lGh~~p~i~~Ai~~ql~~~~~~~~~~~~----~~~~~~lae~L~~~~--p~~~~~v~f~~SGsE  124 (457)
T PRK05639         52 GNVFIDFLAGAAAA-STGYSHPKLVKAVQEQVALIQHSMIGYTH----SERAIRVAEKLAEIS--PIENPKVLFGLSGSD  124 (457)
T ss_pred             CCEEEECCcCHHhh-ccCCCCHHHHHHHHHHHHhccccccCccC----CHHHHHHHHHHHhhC--CCCcCEEEEeCchHH
Confidence            78889998875331 1123789999999999875321  12222    123333444443321  222368999999999


Q ss_pred             HHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhc-Cc-------------eeEEeecCCCCC--CC----CCH------
Q 019298          112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDKG--WE----VDL------  163 (343)
Q Consensus       112 al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~--~~----~d~------  163 (343)
                      |++.+++...  ....+|+....+|++....+... +.             ++..++......  +.    -+.      
T Consensus       125 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  204 (457)
T PRK05639        125 AVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINR  204 (457)
T ss_pred             HHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHH
Confidence            9999998763  23357888888887755433322 11             122222211000  00    022      


Q ss_pred             --HHHHhhh-----cCCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC
Q 019298          164 --DDIESLA-----DQNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST  234 (343)
Q Consensus       164 --~~l~~~~-----~~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~  234 (343)
                        +.+++.+     ..+..+.++.-| ....|.. .+.+.++++.++|++||+++|+||++.++...+... ....++-.
T Consensus       205 ~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~-a~~~~gv~  283 (457)
T PRK05639        205 FLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWF-ASEWFEVK  283 (457)
T ss_pred             HHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHH-HHHhcCCC
Confidence              2344433     123344555566 5556775 568899999999999999999999999865444321 11112222


Q ss_pred             CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhhHHHHH--HHHHHH
Q 019298          235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLE  312 (343)
Q Consensus       235 ~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~  312 (343)
                      ++ |++  ++|.++ .|..+|.+++++        ++.+........+...++.+.+++ .+.|+   .+.+  ..++.+
T Consensus       284 PD-iv~--~gK~l~-gG~pi~av~~~~--------~i~~~~~~~~~~T~~g~p~~~aaa-~a~l~---~l~~~~l~~~~~  347 (457)
T PRK05639        284 PD-LII--FGKGVA-SGMGLSGVIGRK--------ELMDLTSGSALLTPAANPVISAAA-EATLE---IIEEENLLKNAL  347 (457)
T ss_pred             CC-EEE--echhhc-CCCcceeEEehH--------HHHhhcCCCcccCCCcCHHHHHHH-HHHHH---HHHHccHHHHHH
Confidence            23 444  799965 478899999853        455521111122445667666555 33332   2222  445555


Q ss_pred             HHHHHHHHhhcC
Q 019298          313 NFAGSCVPSYKL  324 (343)
Q Consensus       313 ~~~~~~~~~L~~  324 (343)
                      ++-+++.+.|++
T Consensus       348 ~~g~~l~~~L~~  359 (457)
T PRK05639        348 KVGEFIKKRLLE  359 (457)
T ss_pred             HHHHHHHHHHHH
Confidence            555555555544

>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated

Probab=99.42  E-value=4.2e-11  Score=111.51  Aligned_cols=269  Identities=16%  Similarity=0.123  Sum_probs=156.7

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      ++++++|+..|.-..  .++ .+|.+.+++++++.........  ....+.+..+++.+.+..  +...+.+++++++++
T Consensus        41 dG~~ylD~~~g~~~~--~lGh~~p~i~~Ai~~q~~~~~~~~~~--~~~~~~~~~la~~L~~~~--p~~~~~v~f~~SGsE  114 (428)
T PRK07986         41 DGRRLVDGMSSWWAA--IHGYNHPQLNAAMKSQIDAMSHVMFG--GITHPPAIELCRKLVAMT--PQPLECVFLADSGSV  114 (428)
T ss_pred             CCCEEEEcchhHHhh--cCCCCCHHHHHHHHHHHhhcCCcccc--ccCCHHHHHHHHHHHhhC--CCCcCEEEEeCCcHH
Confidence            388899998875331  233 6799999999998753211110  011234455555554322  223469999999999


Q ss_pred             HHHHHHHHhcC-------CCCeEEEeCCCCcchHHHHHhc-Cce-------------eEEeecCCCC---CC-CCCHHHH
Q 019298          112 AIDVAMALLSR-------PGANILLPRPGFPIYELSAAFR-HIE-------------VRHFDLLPDK---GW-EVDLDDI  166 (343)
Q Consensus       112 al~~~~~~l~~-------~gd~vl~~~p~~~~~~~~~~~~-g~~-------------~~~~~~~~~~---~~-~~d~~~l  166 (343)
                      |++.+++....       ...+|+...-+|++....+... +..             +..++.....   .+ .-|++++
T Consensus       115 Ave~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l  194 (428)
T PRK07986        115 AVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPF  194 (428)
T ss_pred             HHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHH
Confidence            99999887532       2367888898887754333222 211             1111111000   00 1145677


Q ss_pred             HhhhcC--CceEEEEeCC--CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEc
Q 019298          167 ESLADQ--NTVALVIINP--GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLG  241 (343)
Q Consensus       167 ~~~~~~--~~~~i~~~~p--~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~  241 (343)
                      ++.++.  +..+.++..|  +.-.|.. .+.+.+++|.++|++||+++|+||++.++...+... ....++-.+. |+  
T Consensus       195 ~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~f-a~~~~gv~PD-i~--  270 (428)
T PRK07986        195 ARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLF-ACEHAGIAPD-IL--  270 (428)
T ss_pred             HHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCee-eecccCCCCC-EE--
Confidence            777742  2334444545  4455654 567899999999999999999999998764444321 1122222222 33  


Q ss_pred             cCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhh------hccccCcchHHHHHHHhccchhhHHHHH--HHHHHH
Q 019298          242 SLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY------FDILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLE  312 (343)
Q Consensus       242 S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~  312 (343)
                      +++|.++ .| +.+|.++++        +++.+.+...      ...++..++++.+++ .+.|+.   +.+  .+++++
T Consensus       271 t~gK~l~-gG~~p~~av~~~--------~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa-~a~L~~---i~~~~~~~~~~  337 (428)
T PRK07986        271 CLGKALT-GGTMTLSATLTT--------REVAETISNGEAGCFMHGPTFMGNPLACAVA-NASLSL---LESGDWQQQVA  337 (428)
T ss_pred             Eechhhh-CCcccCcchhch--------HHHHHHhhcCCCCccccCCCCCcCHHHHHHH-HHHHHH---HHhCCHHHHHH
Confidence            4899975 56 578887774        3677776541      223445677776666 343321   111  566666


Q ss_pred             HHHHHHHHhhcC
Q 019298          313 NFAGSCVPSYKL  324 (343)
Q Consensus       313 ~~~~~~~~~L~~  324 (343)
                      ++-+.+.+.|++
T Consensus       338 ~~g~~l~~~l~~  349 (428)
T PRK07986        338 AIEAQLREELAP  349 (428)
T ss_pred             HHHHHHHHHHHH
Confidence            666666666654

>PRK13360 omega amino acid--pyruvate transaminase; Provisional

Probab=99.41  E-value=7.5e-11  Score=110.47  Aligned_cols=271  Identities=18%  Similarity=0.135  Sum_probs=157.1

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++.++||..|.-.. +.-..+|.+.+++++++++.. ...+   ....+.+..+++.+.+..  +-..+.+++++++++
T Consensus        44 dG~~ylD~~~g~~~~-~lGh~~p~v~~ai~~ql~~l~~~~~~---~~~~~~~~~la~~l~~~~--p~~~~~v~f~~sGse  117 (442)
T PRK13360         44 DGRRVLDGTAGLWCV-NAGHGRPEIVEAVRAQAGELDYAPAF---QMGHPKAFELANRIAEIA--PGGLNHVFFTNSGSE  117 (442)
T ss_pred             CCCEEEECchhHHHh-ccCCCCHHHHHHHHHHHHhCCCcccC---CcCCHHHHHHHHHHHHhC--CCCCCEEEEeCCcHH
Confidence            388899998775321 112378999999999987521 1111   111233444555543322  112468999999999


Q ss_pred             HHHHHHHHhcC-------C-CCeEEEeCCCCcchHHHHHhc-Cc------------eeEEeecCCC---CCCCC------
Q 019298          112 AIDVAMALLSR-------P-GANILLPRPGFPIYELSAAFR-HI------------EVRHFDLLPD---KGWEV------  161 (343)
Q Consensus       112 al~~~~~~l~~-------~-gd~vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~---~~~~~------  161 (343)
                      |++.+++....       + ..+|+...-+|++....+... |.            .+..++....   ..+..      
T Consensus       118 A~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  197 (442)
T PRK13360        118 SVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHG  197 (442)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHH
Confidence            99999886531       1 257998888888764332211 11            1122222110   00111      


Q ss_pred             --CHHHHHhhhc---CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC
Q 019298          162 --DLDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST  234 (343)
Q Consensus       162 --d~~~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~  234 (343)
                        ..+.+++.+.   .+..+.++..| ....|.. .+.+.+++|.++|++||+++|+||++.++...+... ....++-.
T Consensus       198 ~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~-a~~~~gv~  276 (442)
T PRK13360        198 AELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPF-AAQYFGVT  276 (442)
T ss_pred             HHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch-hhhhcCCC
Confidence              1456676664   13334455555 6667776 567899999999999999999999998764444321 11112211


Q ss_pred             CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh--------hccccCcchHHHHHHHhccchhhHHHHH
Q 019298          235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQVCIMYGCLSTIMQIMI  306 (343)
Q Consensus       235 ~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~~l~~~~~~l~  306 (343)
                      +. |  .+++|.++...+.+|.+++++        ++.+.+...        ...++..++++.+++ .+.|+   .+.+
T Consensus       277 PD-i--vt~gK~l~gG~~P~gav~~~~--------~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa-~a~L~---~l~~  341 (442)
T PRK13360        277 PD-L--LTCAKGLTNGAIPMGAVFVSS--------EIHDAFMQGPEAGIEFFHGYTYSGHPLACAAA-LATLD---LYER  341 (442)
T ss_pred             Cc-e--eeeeeccccCccceEEEEEcH--------HHHHHhhcCCccccccccCCCCCCCHHHHHHH-HHHHH---HHHh
Confidence            22 3  378999765337899988853        566655321        222445677766666 44432   1111


Q ss_pred             --HHHHHHHHHHHHHHhhcCC
Q 019298          307 --HGNFLENFAGSCVPSYKLI  325 (343)
Q Consensus       307 --~~~~~~~~~~~~~~~L~~~  325 (343)
                        ..++.+++-+++.+.|+++
T Consensus       342 ~~l~~~~~~~g~~l~~~l~~l  362 (442)
T PRK13360        342 EGLLTRAARLAPYWEDALHSL  362 (442)
T ss_pred             CCHHHHHHHHHHHHHHHHHHh
Confidence              5566666666666666543

>PRK07678 aminotransferase; Validated

Probab=99.41  E-value=1.6e-10  Score=108.63  Aligned_cols=265  Identities=15%  Similarity=0.079  Sum_probs=153.8

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      ++++++|+..|.-.. +.-..+|++.+++++++.......  .... .+....+++.+.+..+   ..+.+++++++++|
T Consensus        45 dG~~ylD~~~g~~~~-~lGh~~p~v~~ai~~q~~~~~~~~--~~~~-~~~~~~lae~l~~~~~---~~~~v~f~~sGseA  117 (451)
T PRK07678         45 QGNRYLDGMSGLWCV-NVGYGRKELAEAAYEQLKTLSYFP--LTQS-HEPAIKLAEKLNEWLG---GEYVIFFSNSGSEA  117 (451)
T ss_pred             CCCEEEEccccHHhh-cCCCCCHHHHHHHHHHHHhcCccc--cccC-CHHHHHHHHHHHHhCC---CCCEEEEeCCcHHH
Confidence            388999998775331 112368999999999987542111  1111 2233444444443221   13589999999999


Q ss_pred             HHHHHHHhcC-------CC-CeEEEeCCCCcchHHHHHhc-Cc------------eeEEeecCCCCCCCC---------C
Q 019298          113 IDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFR-HI------------EVRHFDLLPDKGWEV---------D  162 (343)
Q Consensus       113 l~~~~~~l~~-------~g-d~vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~~~~---------d  162 (343)
                      ++.+++....       +| .+|+...-+|++....+... +.            .+..++..  +.+..         +
T Consensus       118 ~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  195 (451)
T PRK07678        118 NETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPP--DCYRMPGIESEDIYD  195 (451)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCC--ccccccccCChHHHH
Confidence            9999887531       22 57888888887765444332 11            11112111  11111         1


Q ss_pred             ---HHHHHhhhc---CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC
Q 019298          163 ---LDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST  234 (343)
Q Consensus       163 ---~~~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~  234 (343)
                         ++.+++.+.   .+..+.++..| ..-.|.. .+.+.++++.++|++||+++|.||++.+|...+.. .....++-.
T Consensus       196 ~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~-~~~~~~gv~  274 (451)
T PRK07678        196 LECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKA-FGFMNYGVK  274 (451)
T ss_pred             HHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchh-HHHHhcCCC
Confidence               223455553   23344555566 4445666 57789999999999999999999999887554431 112222222


Q ss_pred             CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-------hccccCcchHHHHHHHhccchhhHHHHH-
Q 019298          235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-------FDILGDPATFIQVCIMYGCLSTIMQIMI-  306 (343)
Q Consensus       235 ~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~a~~~~~l~~~~~~l~-  306 (343)
                      +. |+  +++|.++...+.+|.+++++        ++.+.+...       ...+++.++++.+++ .+.|+.   +.+ 
T Consensus       275 PD-iv--t~gK~lggG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa-~a~l~~---l~~~  339 (451)
T PRK07678        275 PD-II--TMAKGITSAYLPLSATAVKK--------EIYEAFKGKGEYEHFRHVNTFGGNPAACALA-LKNLEI---MENE  339 (451)
T ss_pred             CC-EE--EeecccccCCcceeEEEEcH--------HHHHHHhccCcccccccCCCCCcCHHHHHHH-HHHHHH---HHhC
Confidence            22 33  56999765447999999853        666666431       223556777777776 444331   111 


Q ss_pred             -HHHHHHHHHHHHHHhh
Q 019298          307 -HGNFLENFAGSCVPSY  322 (343)
Q Consensus       307 -~~~~~~~~~~~~~~~L  322 (343)
                       ..+++++.-+.+.+.|
T Consensus       340 ~~~~~~~~~g~~l~~~l  356 (451)
T PRK07678        340 NLIERSAQLGELLLEQL  356 (451)
T ss_pred             CHHHHHHHHHHHHHHHH
Confidence             4445555555555544

>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.41  E-value=5.9e-11  Score=110.54  Aligned_cols=270  Identities=15%  Similarity=0.103  Sum_probs=153.1

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++.++|+..|.-.  ..++ .+|++.+++++++++.....+..  -..+....+++.+....  +-..+.+++++++++
T Consensus        38 dG~~ylD~~~g~~~--~~lGh~~p~i~~ai~~q~~~~~~~~~~~--~~~~~~~~lae~L~~~~--p~~~~~v~f~~SGse  111 (422)
T PRK05630         38 DGSTVIDAMSSWWS--AAHGHGHPRLKAAAHKQIDTMSHVMFGG--LTHEPAIKLTRKLLNLT--DNGLDHVFYSDSGSV  111 (422)
T ss_pred             CCCEEEEcchhHHH--hcCCCCCHHHHHHHHHHHHhCCCcccCC--cCCHHHHHHHHHHHhhC--CCCcCEEEEeCCcHH
Confidence            38899999887633  1233 78999999999987532111110  01223344444443321  122469999999999


Q ss_pred             HHHHHHHHhcC-------CC-CeEEEeCCCCcchHHHHHhc-Cc-------------eeEEeecCCCCCCCC-C----HH
Q 019298          112 AIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDKGWEV-D----LD  164 (343)
Q Consensus       112 al~~~~~~l~~-------~g-d~vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~-d----~~  164 (343)
                      |++.+++....       ++ .+|+...-+|++....+... +.             ....++......... +    .+
T Consensus       112 A~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  191 (422)
T PRK05630        112 SVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLR  191 (422)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHH
Confidence            99999887531       22 57888888887754433322 11             111222111000000 1    23


Q ss_pred             HHHhhhcCCceEEEEeCC--CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEc
Q 019298          165 DIESLADQNTVALVIINP--GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLG  241 (343)
Q Consensus       165 ~l~~~~~~~~~~i~~~~p--~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~  241 (343)
                      .+++.+.++..+++ ..|  ....|.. .+.+.++++.++|++||+++|+||++.++...+.. .....++-.++ |+  
T Consensus       192 ~~~~~~~~~iAAvi-~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~-~a~~~~gv~PD-i~--  266 (422)
T PRK05630        192 SLELLIDETVAAII-IEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGEL-FATLAAGVTPD-IM--  266 (422)
T ss_pred             HHHHHHhhceEEEE-EechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchh-hHHHhcCCCCC-ee--
Confidence            44554544444444 445  5667775 56789999999999999999999999887544432 11111222222 33  


Q ss_pred             cCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhh-------hccccCcchHHHHHHHhccchhhHHHHHHHHHHHH
Q 019298          242 SLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY-------FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLEN  313 (343)
Q Consensus       242 S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~  313 (343)
                      +++|.++ .| ..+|.+++++        ++.+.+...       ...++..++.+.+++ .+.|+...+- +.++++++
T Consensus       267 t~gK~l~-gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa-~aaL~~l~~~-~~~~~~~~  335 (422)
T PRK05630        267 CVGKALT-GGFMSFAATLCTD--------KVAQLISTPNGGGALMHGPTFMANPLACAVA-HASLEIIETG-MWRKQVKR  335 (422)
T ss_pred             eeechhh-cCccccceeeccH--------HHHHHHhccCCCCccccCCCCcCCHHHHHHH-HHHHHHHHhC-cHHHHHHH
Confidence            6799953 46 5789988853        566665421       123456677766666 3443321110 14455556


Q ss_pred             HHHHHHHhhcC
Q 019298          314 FAGSCVPSYKL  324 (343)
Q Consensus       314 ~~~~~~~~L~~  324 (343)
                      +-+.+.+.|+.
T Consensus       336 ~g~~l~~~L~~  346 (422)
T PRK05630        336 IEAELIAGLSP  346 (422)
T ss_pred             HHHHHHHHHHH
Confidence            55555555543

>PRK12403 putative aminotransferase; Provisional

Probab=99.41  E-value=1.1e-10  Score=109.81  Aligned_cols=247  Identities=17%  Similarity=0.148  Sum_probs=139.3

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++.++||..|.-....++ .+|.+.+++++++++... +.+  ..+..+....+++.+....  +-..+.+++++++++
T Consensus        52 dG~~ylD~~~g~~~~~lGh-~hp~v~~A~~~q~~~~~~~~~~--~~~~~~~~~~lae~L~~~~--p~~~~~v~f~~SGse  126 (460)
T PRK12403         52 DGKRYLDGMSGLWCTNLGY-GRKDLAAAAARQMEQLPYYNMF--FHTTHPAVIELSELLFSLL--PGHYSHAIYTNSGSE  126 (460)
T ss_pred             CCCEEEECchhHHhhcCCC-CCHHHHHHHHHHHHhCCCeecc--cccCCHHHHHHHHHHHHhC--CCCcCEEEEeCCcHH
Confidence            3788999987753211222 779999999999876321 111  0122233334444443221  212368999999999


Q ss_pred             HHHHHHHHhc-------CCCC-eEEEeCCCCcchHHHH-HhcCce-----------eEEeecCC--CCCCCC--------
Q 019298          112 AIDVAMALLS-------RPGA-NILLPRPGFPIYELSA-AFRHIE-----------VRHFDLLP--DKGWEV--------  161 (343)
Q Consensus       112 al~~~~~~l~-------~~gd-~vl~~~p~~~~~~~~~-~~~g~~-----------~~~~~~~~--~~~~~~--------  161 (343)
                      |+..+++...       ++++ .|+...-+|++..... ...+..           +..++...  ...+..        
T Consensus       127 A~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  206 (460)
T PRK12403        127 ANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRR  206 (460)
T ss_pred             HHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHH
Confidence            9999998874       2333 4555566776543322 222211           11111100  000011        


Q ss_pred             CHHHHHhhhc---CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCC
Q 019298          162 DLDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP  236 (343)
Q Consensus       162 d~~~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~  236 (343)
                      +.+.+++.+.   .+..+.++.-| ....|.. .+.+.+++|.++|++||+++|+||++.++...+... ....++-.++
T Consensus       207 ~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~-a~e~~gv~PD  285 (460)
T PRK12403        207 AALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWF-AHEHFGFEPD  285 (460)
T ss_pred             HHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh-hhhhcCCCCC
Confidence            1244555442   12334455555 5666765 567899999999999999999999998875544321 1111222222


Q ss_pred             EEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhh-----hccccCcchHHHHHHHhccc
Q 019298          237 ILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY-----FDILGDPATFIQVCIMYGCL  298 (343)
Q Consensus       237 ~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~~~l  298 (343)
                       |+  +++|.++ .| ..+|.++++        +++.+.+...     ...+++.++++.+++ .+.|
T Consensus       286 -iv--~~gK~lg-gG~~Piga~v~~--------~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaa-la~L  340 (460)
T PRK12403        286 -TL--SIAKGLT-SGYVPMGGLVLS--------KRIAEALVEQGGVFAHGLTYSGHPVAAAVA-IANL  340 (460)
T ss_pred             -eE--EEccccc-ccccceEEEEEC--------HHHHHHHhcCCCccccCCCCCCCHHHHHHH-HHHH
Confidence             44  3899965 46 489988875        2566666421     122445677777666 4443

>PRK06082 4-aminobutyrate aminotransferase; Provisional

Probab=99.41  E-value=1.2e-10  Score=109.59  Aligned_cols=267  Identities=16%  Similarity=0.063  Sum_probs=152.5

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      +++++||..+..   .+++ .+|.+.++++++++....   .......+....+++.+....+  -..+.++++++++++
T Consensus        71 G~~ylD~~g~~~---~~lGh~~p~v~~Ai~~ql~~~~~---~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGseA  142 (459)
T PRK06082         71 GKKYMDFHGNNV---HQLGYGHPHVIEKVKEQMAKLPF---SPRRFTNETAIECAEKLTEIAG--GELNRVLFAPGGTSA  142 (459)
T ss_pred             CCEEEEcccHhh---cccCCCCHHHHHHHHHHHHhCCC---ccCccCCHHHHHHHHHHHHhCC--CCCCEEEECCCcHHH
Confidence            778899873322   2244 789999999999875321   1111122444455555543221  123689999999999


Q ss_pred             HHHHHHHhcC--CCCeEEEeCCCCcchHHHHHh-cCce------------eEEeecCCCCC--CC-CC------HHHHHh
Q 019298          113 IDVAMALLSR--PGANILLPRPGFPIYELSAAF-RHIE------------VRHFDLLPDKG--WE-VD------LDDIES  168 (343)
Q Consensus       113 l~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~-~g~~------------~~~~~~~~~~~--~~-~d------~~~l~~  168 (343)
                      +..+++....  ...+|+...-+|++....+.. .|..            +..++......  +. .|      ++.+++
T Consensus       143 ve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  222 (459)
T PRK06082        143 IGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEY  222 (459)
T ss_pred             HHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHH
Confidence            9999887531  236788888888765433322 2211            11121100000  00 01      245666


Q ss_pred             hhcC-CceEEEEeCC-CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccc
Q 019298          169 LADQ-NTVALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKR  246 (343)
Q Consensus       169 ~~~~-~~~~i~~~~p-~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~  246 (343)
                      .+.. +..+.++.-| .+..+...+.+.++++.++|++||+++|.||++.++...+... ....++-.++ |++  ++|.
T Consensus       223 ~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~f-a~e~~gv~PD-iv~--~gKg  298 (459)
T PRK06082        223 VIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWF-THQAYGIEPD-ILC--IGKG  298 (459)
T ss_pred             HHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhh-HhHhhCCCCC-EEE--eccc
Confidence            6642 2334555556 5554556788999999999999999999999999875444321 1122222223 433  8999


Q ss_pred             cCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHH--HHHHHHHHHHHHHHhhc
Q 019298          247 WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLENFAGSCVPSYK  323 (343)
Q Consensus       247 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~~~~~~~~~~L~  323 (343)
                      ++...+.+|.+++++        ++....... ...+++.++++.+++ .+.|+.   +.+  ..++++++-+.+.+.|+
T Consensus       299 l~gG~~P~~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa-~a~L~~---l~~~~l~~~~~~~g~~l~~~L~  366 (459)
T PRK06082        299 LGGGLVPIAAMITKD--------KYNTAAQISLGHYTHEKSPLGCAAA-LATIEV---IEQEGLLEKVKADSQFMRERLL  366 (459)
T ss_pred             ccCCCCcceEEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHH-HHHHHH---HHhcCHHHHHHHHHHHHHHHHH
Confidence            775336899998853        333222111 113556677776666 444331   111  55666666666666665


Q ss_pred             C
Q 019298          324 L  324 (343)
Q Consensus       324 ~  324 (343)
                      +
T Consensus       367 ~  367 (459)
T PRK06082        367 E  367 (459)
T ss_pred             H
Confidence            4

>PRK09221 beta alanine--pyruvate transaminase; Provisional

Probab=99.40  E-value=1.2e-10  Score=109.22  Aligned_cols=273  Identities=17%  Similarity=0.117  Sum_probs=156.3

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      ++++++|+..|.-..  +++ .+|.+.++++++++....  +.......+....+++.+....  +...+.+++++++++
T Consensus        47 dG~~ylD~~~g~~~~--~lGh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~L~~~~--p~~~~~v~f~~sGse  120 (445)
T PRK09221         47 DGRKILDGTAGLWCC--NAGHGRPEIVEAVARQAATLDY--APAFQMGHPLAFELAERLAELA--PGGLDHVFFTNSGSE  120 (445)
T ss_pred             CCCEEEEccccHhhc--cCCCCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhC--CCCCCEEEEeCCcHH
Confidence            388999998885332  233 789999999999875211  1110111233334555554322  122468999999999


Q ss_pred             HHHHHHHHhcC-------C-CCeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCC---CCCCCC------
Q 019298          112 AIDVAMALLSR-------P-GANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLP---DKGWEV------  161 (343)
Q Consensus       112 al~~~~~~l~~-------~-gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~---~~~~~~------  161 (343)
                      +++.+++....       + ..+|+...-+|++....+...+.             .+..++...   ...+..      
T Consensus       121 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (445)
T PRK09221        121 SVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHG  200 (445)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHH
Confidence            99999887531       1 25788888888776433322211             111222110   000000      


Q ss_pred             --CHHHHHhhhcC---CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC
Q 019298          162 --DLDDIESLADQ---NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST  234 (343)
Q Consensus       162 --d~~~l~~~~~~---~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~  234 (343)
                        ..+.+++.+..   +..+.++..| ....|.. .+.+.++++.++|++||+++|+||++.++...+... ....++-.
T Consensus       201 ~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~-~~~~~gv~  279 (445)
T PRK09221        201 AELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAF-AAERFGVT  279 (445)
T ss_pred             HHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhh-HHHhcCCC
Confidence              13466666542   2334444555 6677876 467889999999999999999999998765444321 11112211


Q ss_pred             CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh--------hccccCcchHHHHHHHhccchhhHHHHH
Q 019298          235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQVCIMYGCLSTIMQIMI  306 (343)
Q Consensus       235 ~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~~l~~~~~~l~  306 (343)
                      +.   +.+++|.++...+.+|.+++++        ++.+.+...        ...++..++++.+++ .+.|+...+ .+
T Consensus       280 PD---i~~~gK~l~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa-~a~L~~i~~-~~  346 (445)
T PRK09221        280 PD---IITFAKGLTNGAIPMGAVIASD--------EIYDAFMQGPEYAIEFFHGYTYSAHPVACAAG-LATLDIYRE-ED  346 (445)
T ss_pred             CC---EEEeccccccCcccceeeEEcH--------HHHHhhccCcccccccccccCCCcCHHHHHHH-HHHHHHHHh-cc
Confidence            22   2367999755447789988853        566655421        222445677766666 344332110 01


Q ss_pred             HHHHHHHHHHHHHHhhcCC
Q 019298          307 HGNFLENFAGSCVPSYKLI  325 (343)
Q Consensus       307 ~~~~~~~~~~~~~~~L~~~  325 (343)
                      ..++++++.+.+.+.|+++
T Consensus       347 l~~~~~~~g~~l~~~l~~l  365 (445)
T PRK09221        347 LFERAAELAPYFEDAVHSL  365 (445)
T ss_pred             HHHHHHHHHHHHHHHHHhh
Confidence            5666777777777766554

>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated

Probab=99.39  E-value=1.2e-10  Score=105.78  Aligned_cols=278  Identities=15%  Similarity=0.092  Sum_probs=168.2

Q ss_pred             ccceeEeccCCCCCCCCC-CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCF-HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      ..-.|||-...     .. .++++++++|..  .+   ..|..++....|++.+++++        ..+.++.|..++.+
T Consensus        40 ~dV~IDLrSDT-----gT~apS~~m~aAM~~--GD---D~Y~gdpSv~~Lee~vael~--------G~E~alpthqGRga  101 (467)
T TIGR02617        40 EDVFIDLLTDS-----GTGAVTQSMQAAMMR--GD---EAYSGSRSYYALAESVKNIF--------GYQYTIPTHQGRGA  101 (467)
T ss_pred             CCeEEECccCC-----CCCCCCHHHHHHHHc--CC---cccccCchHHHHHHHHHHHh--------CCceEEECCCCchH
Confidence            45567776654     23 367888888776  11   25877778899999999999        45678889888999


Q ss_pred             HHHHHHHhcC-CCCeEEEeCC-------C-CcchHHHHHhcCceeEEeecC--------CCCCCCCCHHHHHhhhcC---
Q 019298          113 IDVAMALLSR-PGANILLPRP-------G-FPIYELSAAFRHIEVRHFDLL--------PDKGWEVDLDDIESLADQ---  172 (343)
Q Consensus       113 l~~~~~~l~~-~gd~vl~~~p-------~-~~~~~~~~~~~g~~~~~~~~~--------~~~~~~~d~~~l~~~~~~---  172 (343)
                      -..+++.+++ +|+.+++..+       . |......+...|.....+...        ......+|++++++++++   
T Consensus       102 E~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~  181 (467)
T TIGR02617       102 EQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGP  181 (467)
T ss_pred             HHHHHHhhcccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCC
Confidence            9999999988 6777765443       2 222344567778777665321        222357899999999974   


Q ss_pred             -CceEEEEeCC-CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCcc----------ccCCCCCCccc-ccCCCCCEEE
Q 019298          173 -NTVALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHL----------VFGDKPFVPMG-VFGSTVPILT  239 (343)
Q Consensus       173 -~~~~i~~~~p-~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~----------~~~~~~~~~~~-~~~~~~~~i~  239 (343)
                       +...+...-. |.-.|+++|.+.++++.++|++||+.++.|.+-..-          .+.+.+...+. .+-.. -..+
T Consensus       182 ~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~-aDsv  260 (467)
T TIGR02617       182 NNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKY-ADML  260 (467)
T ss_pred             CCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhcc-CCEE
Confidence             1222222111 334789999999999999999999999999754321          12222211110 00011 1267


Q ss_pred             EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh------ccccCcchHHHHHHHhccchh--hHHHHHHHHHH
Q 019298          240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF------DILGDPATFIQVCIMYGCLST--IMQIMIHGNFL  311 (343)
Q Consensus       240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~a~~~~~l~~--~~~~l~~~~~~  311 (343)
                      ..|+||.++.+   +|.+++.+++.+   .++.++++...      ..+++.+.--..+++.+ |.+  ...+++   .-
T Consensus       261 t~slsKglgAp---vGg~Lag~d~~~---~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~G-l~e~~~~~yl~---~r  330 (467)
T TIGR02617       261 AMSAKKDAMVP---MGGLLCFKDDSF---FDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVG-LYDGMNLDWLA---YR  330 (467)
T ss_pred             EEEcCCCCCCc---ccceEEecchhH---HHHHHHHHhhcccccCCcCcCchhHHHHHHHHhh-hhhcccHHHHH---HH
Confidence            77999997766   455444432200   04555555542      11334444444444122 322  122332   22


Q ss_pred             HHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298          312 ENFAGSCVPSYKLIPELINFKSTGSSLKYLD  342 (343)
Q Consensus       312 ~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~  342 (343)
                      -+..+++.+.|.+. |+++.. .||.-+|+|
T Consensus       331 i~qv~yl~~~L~~~-Gvpi~~-~Gghav~iD  359 (467)
T TIGR02617       331 INQVQYLVNGLEEI-GVVCQQ-AGGHAAFVD  359 (467)
T ss_pred             HHHHHHHHHHHHhC-CCcEEe-cCccEEEEe
Confidence            22344555666665 898877 899888876

Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.

>PRK06149 hypothetical protein; Provisional

Probab=99.39  E-value=1.8e-10  Score=117.65  Aligned_cols=263  Identities=14%  Similarity=0.086  Sum_probs=150.6

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCC-CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFN-GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++++|+..|.    ..++ .+|++.+++++++.....+ .|.. ....+|.+.+++++      +-..+.+++++++++
T Consensus       584 G~~ylD~~~~~----~~lGh~hp~v~~Ai~~q~~~l~~~~~~~~-~~~~elae~L~~~~------p~~~~~v~f~~SGsE  652 (972)
T PRK06149        584 GRSYLDMVNNV----TVLGHGHPRLAAAAARQWSLLNTNSRFHY-AAVAEFSERLAALA------PDGLDTVFLVNSGSE  652 (972)
T ss_pred             CCEEEECCCCc----cccCCCCHHHHHHHHHHHHhccccccccC-HHHHHHHHHHHHhC------CCCcCEEEEeCCchH
Confidence            78889998775    2355 7899999999998754222 1211 12234444444444      223468999999999


Q ss_pred             HHHHHHHHh---cCCCCeEEEeCCCCcchHHHHHhc-Cc-------------eeEEeecCCC--CCCC-CC-----HHHH
Q 019298          112 AIDVAMALL---SRPGANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPD--KGWE-VD-----LDDI  166 (343)
Q Consensus       112 al~~~~~~l---~~~gd~vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~--~~~~-~d-----~~~l  166 (343)
                      |...+++..   .++ .+|+..+-+|++....+... +.             .+..++....  ..+. .+     .+.+
T Consensus       653 A~e~AlklAr~~tgr-~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~  731 (972)
T PRK06149        653 ANDLAIRLAWAASGR-RDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDV  731 (972)
T ss_pred             HHHHHHHHHHHhcCC-CeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHH
Confidence            999999853   333 56777777777544322111 10             0111211100  0011 11     2333


Q ss_pred             Hhhhc-----CCceEEEEeCC-CCCcc-cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEE
Q 019298          167 ESLAD-----QNTVALVIINP-GNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT  239 (343)
Q Consensus       167 ~~~~~-----~~~~~i~~~~p-~nptG-~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~  239 (343)
                      ++.++     .+..+.++.-| ....| ...+++.++++.++|++||+++|+||++.+|...|.....+..++-.+. |+
T Consensus       732 ~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PD-iv  810 (972)
T PRK06149        732 VAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPD-II  810 (972)
T ss_pred             HHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCC-EE
Confidence            33221     13344555566 44445 4577889999999999999999999999877554432222222222223 33


Q ss_pred             EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh--hhccccCcchHHHHHHHhccchhhHHHHH--HHHHHHHHH
Q 019298          240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK--YFDILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLENFA  315 (343)
Q Consensus       240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~~~~  315 (343)
                        +++|.+| .|..+|.+++++        ++.+.+..  ....+.+.++++.+++ .+.|+   .+.+  ..++.++.-
T Consensus       811 --t~gK~lg-~G~Pl~av~~~~--------~i~~~~~~~~~~~sT~~gnP~~~aaa-la~L~---~i~~e~l~~~~~~~G  875 (972)
T PRK06149        811 --TMAKGMG-NGHPLGAVITRR--------EIAEALEAEGYFFSSTGGSPVSCRIG-MAVLD---VLREEKLQENARRVG  875 (972)
T ss_pred             --Eeccccc-CCeeeEEEEEcH--------HHHhhhccCCcccCCCCCCHHHHHHH-HHHHH---HHHhcCHHHHHHHHH
Confidence              6799975 679999999853        56666653  1112345677777666 33332   1111  455555555


Q ss_pred             HHHHHhhcC
Q 019298          316 GSCVPSYKL  324 (343)
Q Consensus       316 ~~~~~~L~~  324 (343)
                      +++.+.|++
T Consensus       876 ~~l~~~L~~  884 (972)
T PRK06149        876 DHLKARLEA  884 (972)
T ss_pred             HHHHHHHHH
Confidence            555555543

>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.39  E-value=1.5e-10  Score=107.90  Aligned_cols=268  Identities=14%  Similarity=0.103  Sum_probs=154.0

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++.++|+..|.-.  ..++ .+|++.+++++++.+.....  ...-..+.+..+++.+....  +...+.+++++++++
T Consensus        42 dG~~ylD~~~g~~~--~~lGh~~p~v~~ai~~q~~~~~~~~--~~~~~~~~~~~lae~L~~~~--p~~~~~v~f~~sGse  115 (429)
T PRK06173         42 DGRRLIDGMSSWWA--ALHGYNHPRLNAAATNQLAKMSHIM--FGGFTHEPAVELAQKLLEIL--PPSLNKIFFADSGSV  115 (429)
T ss_pred             CCCEEEEccchHHh--ccCCCCCHHHHHHHHHHHHhcCCcc--ccccCCHHHHHHHHHHHhhC--CCCcCEEEEeCCchH
Confidence            38889999877522  1232 67999999999987532111  00011223334444443311  223469999999999


Q ss_pred             HHHHHHHHhcC-------C-CCeEEEeCCCCcchHHHHHhc-Cc-------------eeEEeecCCCCCC-----CCCHH
Q 019298          112 AIDVAMALLSR-------P-GANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLPDKGW-----EVDLD  164 (343)
Q Consensus       112 al~~~~~~l~~-------~-gd~vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~-----~~d~~  164 (343)
                      |++.+++....       + ..+|+...-+|++....+... +.             .+..++... ..+     .-+++
T Consensus       116 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~l~  194 (429)
T PRK06173        116 AVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPS-IKFGEEWNDEAIE  194 (429)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCC-cccchhHHHHHHH
Confidence            99999887531       2 257888888887753322221 10             011111100 000     01356


Q ss_pred             HHHhhhcC--CceEEEEeCC--CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEE
Q 019298          165 DIESLADQ--NTVALVIINP--GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT  239 (343)
Q Consensus       165 ~l~~~~~~--~~~~i~~~~p--~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~  239 (343)
                      .+++.+..  +..+.++.-|  ..-.|.. .+.+.++++.++|++||+++|+||++.++...+... ....++-.+. |+
T Consensus       195 ~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~-a~~~~gv~PD-iv  272 (429)
T PRK06173        195 PLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLF-ALEHAGVVPD-IM  272 (429)
T ss_pred             HHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcch-HHHhcCCCCC-EE
Confidence            67776642  2344455555  5666776 688999999999999999999999998764444321 1111222222 44


Q ss_pred             EccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhh-----h-hccccCcchHHHHHHHhccchhhHHHHH--HHHH
Q 019298          240 LGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK-----Y-FDILGDPATFIQVCIMYGCLSTIMQIMI--HGNF  310 (343)
Q Consensus       240 ~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~-----~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~  310 (343)
                      +  ++|.++ .| +.++.++++        +++.+.+..     . ...++..++++.+++ .+.|+   .+.+  .+++
T Consensus       273 ~--~gK~l~-gG~~p~~a~~~~--------~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa-~a~l~---~i~~~~~~~~  337 (429)
T PRK06173        273 C--IGKALT-GGYLTLSATITT--------EAIAQTICSGEAKCFMHGPTFMANPLACAIA-AESIR---LLLESPWQQN  337 (429)
T ss_pred             E--eehhhh-CCccccceEEec--------HHHHHHHhcCCCCccccCCCCCcCHHHHHHH-HHHHH---HHHhCCHHHH
Confidence            3  899974 56 467777774        356666642     1 112344566666666 34332   1111  5666


Q ss_pred             HHHHHHHHHHhhcC
Q 019298          311 LENFAGSCVPSYKL  324 (343)
Q Consensus       311 ~~~~~~~~~~~L~~  324 (343)
                      ++++-+.+.+.|+.
T Consensus       338 ~~~~g~~l~~~L~~  351 (429)
T PRK06173        338 IQRIEAQLKQELAP  351 (429)
T ss_pred             HHHHHHHHHHHHHH
Confidence            67777777776654

>PRK06062 hypothetical protein; Provisional

Probab=99.38  E-value=1.3e-10  Score=109.27  Aligned_cols=245  Identities=16%  Similarity=0.118  Sum_probs=146.6

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++.++|+..|.-.  ..++ .+|.+.+++++++.....  +.+ ....+.+..+++.+....  +-..+.+++++++++
T Consensus        51 dG~~ylD~~~g~~~--~~lGh~~p~v~~Ai~~q~~~~~~--~~~-~~~~~~~~~lae~L~~~~--p~~~~~v~f~~SGsE  123 (451)
T PRK06062         51 EGRRYLDFSSQLVN--TNIGHQHPKVVAAIQEQAARLCT--VAP-AHANDARSEAARLIAERA--PGDLSKVFFTNGGAD  123 (451)
T ss_pred             CCCEEEEcccCHHh--hcCCCCCHHHHHHHHHHHHhcCC--cCC-ccCCHHHHHHHHHHHHhC--CCCCCEEEEcCChHH
Confidence            38899999887633  1233 779999999999875321  111 112334444555554322  222469999999999


Q ss_pred             HHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhc-Cce-----------eEEeecCCCCC--CC--CC-------HHHH
Q 019298          112 AIDVAMALLSR--PGANILLPRPGFPIYELSAAFR-HIE-----------VRHFDLLPDKG--WE--VD-------LDDI  166 (343)
Q Consensus       112 al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~-g~~-----------~~~~~~~~~~~--~~--~d-------~~~l  166 (343)
                      |.+.+++....  ...+|+...-+|++....+... +..           +..++......  +.  -|       ++.+
T Consensus       124 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l  203 (451)
T PRK06062        124 ANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHL  203 (451)
T ss_pred             HHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHH
Confidence            99999887532  2357888888887765444332 111           11111110000  10  02       5667


Q ss_pred             HhhhcC---CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEc
Q 019298          167 ESLADQ---NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLG  241 (343)
Q Consensus       167 ~~~~~~---~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~  241 (343)
                      ++.+..   +..+.++.-| ....|.+ .+.+.++++.++|++||+++|+||++.+|...+... ....++-.+.   +.
T Consensus       204 e~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~-a~~~~gv~PD---i~  279 (451)
T PRK06062        204 ERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWF-AIEHFGVVPD---LI  279 (451)
T ss_pred             HHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHH-HHHhcCCCCC---ee
Confidence            776642   2334555556 5566776 577899999999999999999999999875444321 1111222222   33


Q ss_pred             cCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhh---hccccCcchHHHHHHHhccc
Q 019298          242 SLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY---FDILGDPATFIQVCIMYGCL  298 (343)
Q Consensus       242 S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~a~~~~~l  298 (343)
                      +++|.++ .| +.+|.+++++        ++.+.+...   ...+++.++.+.+++ .+.|
T Consensus       280 t~gK~lg-gG~~Pigav~~~~--------~i~~~~~~~~~~~~~T~~gnpl~~Aaa-~a~L  330 (451)
T PRK06062        280 TFAKGVN-SGYVPLGGVAISE--------AIAATFADRPYPGGLTYSGHPLACAAA-VATI  330 (451)
T ss_pred             eechhhh-cCCcCcEEEEEcH--------HHHHHhccCCCCCCCCCCCCHHHHHHH-HHHH
Confidence            5799965 46 4899988853        566666432   222456677777666 4443

>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=99.38  E-value=1.3e-10  Score=108.60  Aligned_cols=269  Identities=14%  Similarity=0.095  Sum_probs=154.6

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC--CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNG--YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++++||..|.-.... -..+|++.++++++++......  +.......++-+.+++.+      +-.-+.+++++++++
T Consensus        44 G~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~------~~~~~~v~f~~sGse  116 (427)
T TIGR00508        44 GRRLIDGMSSWWAAIH-GYNHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMT------PNALDCVFLADSGSV  116 (427)
T ss_pred             CCEEEEccchHHHhcC-CCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhC------CCCCCEEEEeCCcHH
Confidence            7889999887533211 2378999999999887532111  111111233334444433      222369999999999


Q ss_pred             HHHHHHHHhcC-------C-CCeEEEeCCCCcchHHHHHhc-Cce-------------eEEeecCCCCCCC-----CCHH
Q 019298          112 AIDVAMALLSR-------P-GANILLPRPGFPIYELSAAFR-HIE-------------VRHFDLLPDKGWE-----VDLD  164 (343)
Q Consensus       112 al~~~~~~l~~-------~-gd~vl~~~p~~~~~~~~~~~~-g~~-------------~~~~~~~~~~~~~-----~d~~  164 (343)
                      ++..+++....       + ..+|+...-+|.+....+... +..             ...++. +...+.     -|++
T Consensus       117 A~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~  195 (427)
T TIGR00508       117 AVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPA-PQNRFDEEWNEEAIT  195 (427)
T ss_pred             HHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCC-CCccccchhHHHHHH
Confidence            99999886531       2 257888888887764433332 211             001111 001110     1456


Q ss_pred             HHHhhhcC--CceEEEEeCC--CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEE
Q 019298          165 DIESLADQ--NTVALVIINP--GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT  239 (343)
Q Consensus       165 ~l~~~~~~--~~~~i~~~~p--~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~  239 (343)
                      ++++.+..  +..+.++..|  .+-.|.. .+.+.+++|.++|++||+++|+||++.++...+... ....++-... |+
T Consensus       196 ~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~-~~~~~~v~pD-i~  273 (427)
T TIGR00508       196 PLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLF-ACEHAGVVPD-IL  273 (427)
T ss_pred             HHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccc-hhhhcCCCCC-EE
Confidence            66666642  2344555555  4555554 578999999999999999999999997765544321 1111221222 44


Q ss_pred             EccCccccCCCCC-cEEEEEEeCCCCCCCchHHHHHHhhh------hccccCcchHHHHHHHhccchhhHHHHHHHHHHH
Q 019298          240 LGSLSKRWIVPGW-RLGWFVTTDPCGMFRKPKVVERMKKY------FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLE  312 (343)
Q Consensus       240 ~~S~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~  312 (343)
                      +  ++|.+ ..|+ .++.++++        +++.+.++..      ...++..++++.+++ .+.|+...+ .+..++++
T Consensus       274 ~--~gK~l-~gG~~p~~a~~~~--------~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa-~a~l~~l~~-~~~~~~~~  340 (427)
T TIGR00508       274 C--VGKAL-TGGYMTLSATVTT--------DKVAQTISSGEAGCFMHGPTFMGNPLACAVA-EASLAILLE-GEWQKQVS  340 (427)
T ss_pred             E--echhh-hcCcccceEEEEc--------HHHHHHHhcCCCCccccCCCCCcCHHHHHHH-HHHHHHHHh-CCHHHHHH
Confidence            3  79997 4664 67777764        3677777542      112334567766666 444431100 01566777


Q ss_pred             HHHHHHHHhhcCC
Q 019298          313 NFAGSCVPSYKLI  325 (343)
Q Consensus       313 ~~~~~~~~~L~~~  325 (343)
                      ++.+.+.+.|+++
T Consensus       341 ~~~~~l~~~L~~l  353 (427)
T TIGR00508       341 AIENQLKRELSPL  353 (427)
T ss_pred             HHHHHHHHHHHHh
Confidence            7777777777654

All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.

>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.37  E-value=4.9e-10  Score=105.29  Aligned_cols=268  Identities=14%  Similarity=0.043  Sum_probs=156.5

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  110 (343)
                      +++.++|+..|.-.  ..++ .+|.+.+++++++..... ...   ....+.+..+++.+.+..+  ...+.++++++++
T Consensus        52 dG~~ylD~~~g~~~--~~lGh~~p~v~~Ai~~ql~~~~~~~~~---~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGs  124 (453)
T PRK06943         52 DGRRYLDAISSWWV--NLFGHANPRINAALKDQLDTLEHAMLA---GCTHEPAIELAERLAALTG--GTLGHAFFASDGA  124 (453)
T ss_pred             CCCEEEEcchHHHH--hcCCCCCHHHHHHHHHHHHhcCCcccc---ccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCCH
Confidence            38889999877532  1233 789999999999875311 111   1112344455555543222  1235899999999


Q ss_pred             HHHHHHHHHhc-------CC-CCeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCCCCC--CC-------
Q 019298          111 QAIDVAMALLS-------RP-GANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKG--WE-------  160 (343)
Q Consensus       111 ~al~~~~~~l~-------~~-gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~--~~-------  160 (343)
                      +|++.+++...       .+ ..+|+...-+|++....+.....             .+..++.....+  +.       
T Consensus       125 eAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  204 (453)
T PRK06943        125 SAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVA  204 (453)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHH
Confidence            99999998762       12 36788888888775433322211             111222111000  00       


Q ss_pred             -CCHHHHHhhhcC--CceEEEEeCC--CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC
Q 019298          161 -VDLDDIESLADQ--NTVALVIINP--GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST  234 (343)
Q Consensus       161 -~d~~~l~~~~~~--~~~~i~~~~p--~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~  234 (343)
                       -+++.+++.+..  +..+.++.-|  ....|.. .+.+.++++.++|++||+++|.||++.++...+.- .....++-.
T Consensus       205 ~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~-fa~~~~gv~  283 (453)
T PRK06943        205 ARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTF-FACEQAGVW  283 (453)
T ss_pred             HHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcch-hHHHhCCCC
Confidence             124666666642  2334445555  5666764 67899999999999999999999999988554432 111222222


Q ss_pred             CCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhh-------hhccccCcchHHHHHHHhccchhhHHHHH
Q 019298          235 VPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK-------YFDILGDPATFIQVCIMYGCLSTIMQIMI  306 (343)
Q Consensus       235 ~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~a~~~~~l~~~~~~l~  306 (343)
                      ++++   +++|.++ .| +.+|.+++++        ++.+.+..       ....+++.++++.+++ .+.|+   .+.+
T Consensus       284 PDiv---t~gKgl~-gG~~Pi~av~~~~--------ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa-~a~L~---~i~~  347 (453)
T PRK06943        284 PDFL---CLSKGIS-GGYLPLSLVLSRD--------AIFAAFYDDDVTRGFLHSHSYTGNPLACRAA-LATLD---LFAE  347 (453)
T ss_pred             CCeE---eeehhhc-cCcccceEEEEcH--------HHHHhhcccCccCCccCCCCCCCCHHHHHHH-HHHHH---HHHh
Confidence            3333   3599966 57 5899999853        56665542       1223456677776666 34432   1212


Q ss_pred             --HHHHHHHHHHHHHHhhcC
Q 019298          307 --HGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       307 --~~~~~~~~~~~~~~~L~~  324 (343)
                        ..++.+++-+.+.+.|++
T Consensus       348 ~~l~~~~~~~G~~l~~~L~~  367 (453)
T PRK06943        348 DDVLARNARKSARLRAALAP  367 (453)
T ss_pred             cCHHHHHHHHHHHHHHHHHH
Confidence              445555555555555544

>PRK15400 lysine decarboxylase CadA; Provisional

Probab=99.37  E-value=4.3e-11  Score=115.60  Aligned_cols=162  Identities=15%  Similarity=0.116  Sum_probs=117.0

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCC
Q 019298           79 LPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK  157 (343)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~  157 (343)
                      ..+..+.+|+.|        ..+ ..++++|+|.++..++.+++.+||+|++++.||-+..+.+...|+..+++.... +
T Consensus       197 i~eAe~~AA~~f--------gAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~r-n  267 (714)
T PRK15400        197 HKEAEEYIARVF--------NADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTR-N  267 (714)
T ss_pred             HHHHHHHHHHHh--------CCCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccc-c
Confidence            356667777777        344 567899999999999999999999999999999999999999999999986543 2


Q ss_pred             CCC----CC-----HHHHHhhhcCC-----ceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccc-cCC
Q 019298          158 GWE----VD-----LDDIESLADQN-----TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FGD  222 (343)
Q Consensus       158 ~~~----~d-----~~~l~~~~~~~-----~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~-~~~  222 (343)
                      .++    ++     .+.+++.+...     +..+++++| +-.|.+++.   ++|++.|..++  +++||||+... |..
T Consensus       268 ~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~p-TYdG~~yd~---~~I~~~~~~~~--ilvDEAwgah~~F~p  341 (714)
T PRK15400        268 AYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNT---DFIKKTLDVKS--IHFDSAWVPYTNFSP  341 (714)
T ss_pred             ccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECC-CCccEecCH---HHHHHHhCCCC--EEEEccchhhhccCc
Confidence            322    34     78888888642     226778888 668999654   66666776776  68999999753 332


Q ss_pred             C--CCCccccc-CCCCCEEEEccCccccCCCCCcEEEE
Q 019298          223 K--PFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWF  257 (343)
Q Consensus       223 ~--~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~i  257 (343)
                      .  +..++... ++++.++++.|.+|+  ++|+.-+.+
T Consensus       342 ~~~~~sam~~ga~~~~~i~vtQStHKt--L~alTQaS~  377 (714)
T PRK15400        342 IYEGKCGMSGGRVEGKVIYETQSTHKL--LAAFSQASM  377 (714)
T ss_pred             ccCCcChhhcCCCCCCceEEEEchhhc--ccchhHHhH
Confidence            1  11222211 122456999999999  677666654

>PRK07481 hypothetical protein; Provisional

Probab=99.36  E-value=5.1e-10  Score=105.19  Aligned_cols=271  Identities=15%  Similarity=0.122  Sum_probs=153.8

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      ++++++|+..|.-..  .++ .+|.+.+++++++.+........ ....+.+..+++.+....+ +-..+.+++++++++
T Consensus        40 dG~~ylD~~~g~~~~--~lGh~~p~v~~Ai~~ql~~~~~~~~~~-~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~sGsE  115 (449)
T PRK07481         40 DGKKLLDGVGGLWNV--NVGHNREEVKEAIVRQLDELEYYSTFD-GTTHPRAIELSYELIDMFA-PEGMRRVFFSSGGSD  115 (449)
T ss_pred             CCCEEEECchhHHhh--cCCCCCHHHHHHHHHHHHhccceeccc-ccCCHHHHHHHHHHHHhcC-CCCCCEEEEcCchHH
Confidence            388899998775332  233 77999999999987532111000 1122344445555543221 112468999999999


Q ss_pred             HHHHHHHHhcC-------CC-CeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCCCC--CCC-CCHHHH-
Q 019298          112 AIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDK--GWE-VDLDDI-  166 (343)
Q Consensus       112 al~~~~~~l~~-------~g-d~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~--~~~-~d~~~l-  166 (343)
                      |++.+++....       +| .+|+...-+|++....+.....             .+..++.....  .+. -|.+.+ 
T Consensus       116 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~  195 (449)
T PRK07481        116 SVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELA  195 (449)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHH
Confidence            99999987531       23 5788888888876543332211             11112111000  011 133333 


Q ss_pred             -------Hhhhc---CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC
Q 019298          167 -------ESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST  234 (343)
Q Consensus       167 -------~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~  234 (343)
                             ++.+.   .+..+.++..| ..-.|.. .+.+.++++.++|++||+++|.||++.++...+... ....++-.
T Consensus       196 ~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-a~~~~gv~  274 (449)
T PRK07481        196 RICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWF-GSRGWGVK  274 (449)
T ss_pred             HHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhh-HhhhcCCC
Confidence                   33332   13334455556 5556765 577889999999999999999999999875544321 11222222


Q ss_pred             CCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhh--------hccccCcchHHHHHHHhccchhhHHHH
Q 019298          235 VPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQVCIMYGCLSTIMQIM  305 (343)
Q Consensus       235 ~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~~l~~~~~~l  305 (343)
                      ++++   +++|.++ .| +.+|.+++++        ++.+.+...        ...+++.++++.+++ .+.|+   .+.
T Consensus       275 PDiv---~~gKgl~-gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa-~a~L~---~l~  338 (449)
T PRK07481        275 PDIM---CLAKGIT-SGYVPLGATMVNA--------RIADAFEANADFGGAIMHGYTYSGHPVACAAA-LATLD---IVV  338 (449)
T ss_pred             CCEE---EEeeccc-CCCcCceEEEEcH--------HHHHHHhccCccccccccCCCCCCCHHHHHHH-HHHHH---HHH
Confidence            2333   3599964 46 5899998853        566665421        223456677776666 44432   111


Q ss_pred             H--HHHHHHHHHHHHHHhhcC
Q 019298          306 I--HGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       306 ~--~~~~~~~~~~~~~~~L~~  324 (343)
                      +  ..++.++.-+.+.+.|++
T Consensus       339 ~~~l~~~~~~~g~~l~~~L~~  359 (449)
T PRK07481        339 REDLPANAAKRGAYLLEGLQP  359 (449)
T ss_pred             hhhHHHHHHHHHHHHHHHHHH
Confidence            1  445555555555555543

>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.35  E-value=1.7e-11  Score=109.04  Aligned_cols=253  Identities=12%  Similarity=0.096  Sum_probs=166.4

Q ss_pred             CCCcHHHHHHHHHHHhc--CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEE
Q 019298           51 FHTTHVATEAVAEALLS--EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANIL  128 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl  128 (343)
                      .+..+.+.+++...--.  ..-..-+...-+.++++.+|+|++       .++.+++.-| -......+-.|+++|.-|+
T Consensus       154 g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g-------~e~a~vF~mG-f~TNs~~~p~l~~~gsLIi  225 (519)
T KOG1357|consen  154 GPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLG-------VEDAIVFSMG-FATNSMNIPSLLGKGSLII  225 (519)
T ss_pred             CcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcC-------CcceEEEecc-ccccccCcceeecCCccee
Confidence            34566666666554211  011111222234667777777774       4677777766 5555566778889999999


Q ss_pred             EeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-------C-----ceEEEEe-CCCCCcccccCHHHH
Q 019298          129 LPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-------N-----TVALVII-NPGNPCGNVYSYQHL  195 (343)
Q Consensus       129 ~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-------~-----~~~i~~~-~p~nptG~~~~~~~l  195 (343)
                      ..+-.|......++..|+.++.+..+       |...||+.+++       +     .+++++. .-...-|.+   -.+
T Consensus       226 SDelNHaSi~~GaRLSgAtiRVfkHN-------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~i---v~L  295 (519)
T KOG1357|consen  226 SDELNHASLITGARLSGATTRVFRHN-------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTI---VDL  295 (519)
T ss_pred             eccccchheeccccccCceEEEEecC-------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCee---ccc
Confidence            99999999999999999998888653       45555554432       1     1233333 335677877   678


Q ss_pred             HHHHHHHhhcCcEEEEccCCCccccC--CCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298          196 QKLAETANKLKTLVIADEVYGHLVFG--DKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (343)
Q Consensus       196 ~~l~~~~~~~~~~~i~D~ay~~~~~~--~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  273 (343)
                      .+++.+++++...++.||++.....+  +....-+...++.+..|.+++|+|+|++.|   ||+.+++        ++++
T Consensus       296 p~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G---Gyiagsk--------~lid  364 (519)
T KOG1357|consen  296 PEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGSK--------ELID  364 (519)
T ss_pred             HHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc---ceecCcH--------HHHh
Confidence            88999999999999999999976553  233333334455556799999999999998   9998864        6788


Q ss_pred             HHhhhhc----cccCcchHHHHHHHhccch----hhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCC
Q 019298          274 RMKKYFD----ILGDPATFIQVCIMYGCLS----TIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKST  334 (343)
Q Consensus       274 ~l~~~~~----~~~~~~~~~~~a~~~~~l~----~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~  334 (343)
                      .++....    .+..+++.+|... .++-.    +.....+ ..++++++..+++..|+.. |+.+....
T Consensus       365 ~lrt~s~~~~yat~~sppvaqq~~-ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~-gfivyG~~  432 (519)
T KOG1357|consen  365 YLRTPSPSALYATSLSPPVAQQIL-TSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM-GFIVYGNN  432 (519)
T ss_pred             hhccCCCceeecccCChHHHHHHH-HHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC-cEEEecCC
Confidence            7765522    2345566666555 22110    1112222 7888899999999988887 66654433

>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional

Probab=99.35  E-value=2.4e-10  Score=104.44  Aligned_cols=241  Identities=12%  Similarity=0.003  Sum_probs=150.4

Q ss_pred             CCCcHHHHHHHHHHHhcC---CCCCCCCC-------CCCHHHHHHHHHHHhhhCCCCCCCCcEEEe-cChHHHHHHHHHH
Q 019298           51 FHTTHVATEAVAEALLSE---KFNGYAPT-------AGLPLTRRAIAEYLSRDLPYKLTPNDVFVT-SGCTQAIDVAMAL  119 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~---~~~~Y~~~-------~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~-~g~~~al~~~~~~  119 (343)
                      ...++.+++++...+.+.   ....+...       .-..+.++.+++++    +. -+..+++++ .+++.+++.++..
T Consensus        12 ~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~----~~-~~~~~v~~~~gsgt~~~Ea~~~n   86 (360)
T PRK05355         12 AMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELL----NI-PDNYKVLFLQGGASLQFAMVPMN   86 (360)
T ss_pred             CCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHh----CC-CCCcEEEEEcCCchHHHHHHHHh
Confidence            567899999998876321   11112111       11234555555555    22 122356555 6679999999999


Q ss_pred             hcCCCCeEEEeCCCCcc--hHHHHHhcCceeEEeecCCCCCCCCCHHHHHh-hhcCCceEEEEeCCCCCcccccCHHHHH
Q 019298          120 LSRPGANILLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIES-LADQNTVALVIINPGNPCGNVYSYQHLQ  196 (343)
Q Consensus       120 l~~~gd~vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~-~~~~~~~~i~~~~p~nptG~~~~~~~l~  196 (343)
                      ++.+|+++++..-+..+  +...++.+|.. ..+...+..+ ..+..++++ .++++++.|.+++..+.||+..+  ++.
T Consensus        87 l~~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g-~~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~--~i~  162 (360)
T PRK05355         87 LLGGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDG-FTYIPPLDEWQLSDDAAYVHYTSNETIDGTEFH--ELP  162 (360)
T ss_pred             cCCCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccC-CCCCCChhhccCCCCCCEEEEccCCCcceEecC--ccc
Confidence            99999988877655533  34566777854 5454332223 234444444 66778899999999999999974  355


Q ss_pred             HHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHh
Q 019298          197 KLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK  276 (343)
Q Consensus       197 ~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~  276 (343)
                      ++      +|+++|+|.+.+..    ..+..+..+   +  +++.|..|.+|.+|  +|.+.++++        ..+++.
T Consensus       163 ~i------~g~l~vVDavss~g----~~~idv~~~---d--~~~~ssqK~lgP~G--lg~l~~s~~--------~l~~~~  217 (360)
T PRK05355        163 DT------GDVPLVADMSSDIL----SRPIDVSKF---G--LIYAGAQKNIGPAG--LTIVIVRED--------LLGRAL  217 (360)
T ss_pred             cc------CCCcEEEEcCcccc----CccCCHHHc---c--EEEEeccccccCCc--eEEEEECHH--------HHhhcc
Confidence            44      79999999999863    222333322   2  88889999998777  788887653        332222


Q ss_pred             h-----------hh--ccccCcchHHHHHHHhccchhhHHH--HH-HHHHHHHHHHHHHHhhcCCC
Q 019298          277 K-----------YF--DILGDPATFIQVCIMYGCLSTIMQI--MI-HGNFLENFAGSCVPSYKLIP  326 (343)
Q Consensus       277 ~-----------~~--~~~~~~~~~~~~a~~~~~l~~~~~~--l~-~~~~~~~~~~~~~~~L~~~~  326 (343)
                      .           ..  ...+.++.....++ .++|+...+.  ++ ..++.++..+.+++.|++++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL-~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~  282 (360)
T PRK05355        218 PSIPSMLDYKTHADNDSMYNTPPTFAIYLA-GLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSD  282 (360)
T ss_pred             cCCChHHHHHHHHhcCCccCCCcHHHHHHH-HHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            1           11  11233344444444 5555543322  33 88888899999999999885

>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.35  E-value=3e-10  Score=106.95  Aligned_cols=268  Identities=15%  Similarity=0.078  Sum_probs=155.9

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      +++++|+..|.-.. +.-..+|++.++++++++... .....   ...+.+..+++.+....  +...+.+++++++++|
T Consensus        55 G~~ylD~~~g~~~~-~lGh~~p~v~~Ai~~ql~~l~~~~~~~---~~~~~~~~lae~L~~~~--p~~~~~v~f~~SGseA  128 (460)
T PRK06916         55 GNEYYDGVSSIWLN-VHGHQVPELDEAIREQLNKIAHSTLLG---LANVPSILLAEKLIEVV--PEGLKKVFYSDSGATA  128 (460)
T ss_pred             CCEEEEcchhHHHh-hcCCCCHHHHHHHHHHHHhCCCccccc---cCCHHHHHHHHHHHHhC--CCCCCEEEEeCCcHHH
Confidence            78889997775221 112378999999999987521 11110   11233344444443322  2223689999999999


Q ss_pred             HHHHHHHhcC-------C-CCeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCCCC--CCC--------C
Q 019298          113 IDVAMALLSR-------P-GANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDK--GWE--------V  161 (343)
Q Consensus       113 l~~~~~~l~~-------~-gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~--~~~--------~  161 (343)
                      ++.+++....       + ..+|+...-+|++....+...+.             .+..++.....  .+.        -
T Consensus       129 ve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~  208 (460)
T PRK06916        129 VEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKK  208 (460)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHH
Confidence            9999987542       3 26788888888776544333211             11122111000  001        1


Q ss_pred             CHHHHHhhhcC--CceEEEEeCC--CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCC
Q 019298          162 DLDDIESLADQ--NTVALVIINP--GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP  236 (343)
Q Consensus       162 d~~~l~~~~~~--~~~~i~~~~p--~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~  236 (343)
                      +++.+++.++.  +..+.++.-|  ..-.|.. .+.+.++++.++|++||+++|.||++.++...+... ....++-.+.
T Consensus       209 ~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~-a~~~~gv~PD  287 (460)
T PRK06916        209 HLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMF-ACEHENVTPD  287 (460)
T ss_pred             HHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhh-HHHhcCCCCC
Confidence            24566666642  2334455555  5666766 588999999999999999999999998875444321 1122222223


Q ss_pred             EEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhh--------hhccccCcchHHHHHHHhccchhhHHHHH-
Q 019298          237 ILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK--------YFDILGDPATFIQVCIMYGCLSTIMQIMI-  306 (343)
Q Consensus       237 ~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-  306 (343)
                       |+  +++|.++ .| +.+|.+++++        ++.+.+..        ....+++.++++.+++ .+.|+   .+.+ 
T Consensus       288 -iv--~~gK~l~-gG~~Pi~av~~~~--------ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa-~a~l~---~l~~~  351 (460)
T PRK06916        288 -IM--TAGKGLT-GGYLPIAITVTTD--------EIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVA-LANLE---LYEKT  351 (460)
T ss_pred             -ee--eeehhhh-cCccccceeeecH--------HHHHHhhccccccCccccCCCCCCCHHHHHHH-HHHHH---HHHhc
Confidence             33  4699965 57 5899999853        56655431        1222445677776666 44432   1112 


Q ss_pred             -HHHHHHHHHHHHHHhhcC
Q 019298          307 -HGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       307 -~~~~~~~~~~~~~~~L~~  324 (343)
                       ..++++++-+.+.+.|++
T Consensus       352 ~l~~~~~~~g~~l~~~l~~  370 (460)
T PRK06916        352 NLIEQVARKTEYVATQLED  370 (460)
T ss_pred             cHHHHHHHHHHHHHHHHHH
Confidence             556666666666666654

>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]

Probab=99.35  E-value=2e-10  Score=97.80  Aligned_cols=208  Identities=16%  Similarity=0.095  Sum_probs=140.2

Q ss_pred             CCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcc--hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-Cce
Q 019298           99 TPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTV  175 (343)
Q Consensus        99 ~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~  175 (343)
                      .+.-.++..+++.+++.++-.+++|||.|++....-.+  +.+.++.+|+++..++.+  -+....++.+.+.+.+ +++
T Consensus        67 n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~--~G~~~~le~i~~~lsqh~p~  144 (385)
T KOG2862|consen   67 NAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEAD--IGQAVPLEEITEKLSQHKPK  144 (385)
T ss_pred             CCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHHHHHHHHhhCceeeEEecC--cccCccHHHHHHHHHhcCCc
Confidence            33456677778999999999999999999877655433  456788899999999765  4556899999998865 788


Q ss_pred             EEEEeCCCCCcccccCHHH-HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCC-CCCc
Q 019298          176 ALVIINPGNPCGNVYSYQH-LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV-PGWR  253 (343)
Q Consensus       176 ~i~~~~p~nptG~~~~~~~-l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~-~G~r  253 (343)
                      ++++++....||+.   ++ +..+.++|++|+.++++|.+.+...   . ...   .++.+-.+....-.|++++ +|+.
T Consensus       145 ~vfv~hgdsSTgV~---q~~~~~~g~lc~k~~~lllVD~VaSlgg---t-~F~---mDewgVDvaytgSQKaL~aP~GLs  214 (385)
T KOG2862|consen  145 AVFVTHGDSSTGVL---QDLLAISGELCHKHEALLLVDTVASLGG---T-EFE---MDEWGVDVAYTGSQKALGAPAGLS  214 (385)
T ss_pred             eEEEEecCcccccc---chHHHHHHHHhhcCCeEEEEechhhcCC---c-cce---ehhhcccEEEecchhhcCCCCCcc
Confidence            99999999999999   55 6778889999999999999987521   1 112   2333322444455899887 4543


Q ss_pred             EEEEEEeCCCCCCCchHHHHHHhhhh-----------------------ccccCcchHHHHHHHhccchhh-HHHHH-HH
Q 019298          254 LGWFVTTDPCGMFRKPKVVERMKKYF-----------------------DILGDPATFIQVCIMYGCLSTI-MQIMI-HG  308 (343)
Q Consensus       254 ~G~i~~~~~~~~~~~~~~~~~l~~~~-----------------------~~~~~~~~~~~~a~~~~~l~~~-~~~l~-~~  308 (343)
                        -+..++        ...+++++..                       ..+...++........++|... .+-++ ..
T Consensus       215 --iisfS~--------ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~  284 (385)
T KOG2862|consen  215 --IISFSD--------KALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSW  284 (385)
T ss_pred             --eeecCH--------HHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence              344432        2334443321                       1122333333322225555432 22233 88


Q ss_pred             HHHHHHHHHHHHhhcCCCCce
Q 019298          309 NFLENFAGSCVPSYKLIPELI  329 (343)
Q Consensus       309 ~~~~~~~~~~~~~L~~~~g~~  329 (343)
                      ++.++..+.+...|+.+ |++
T Consensus       285 ~rH~e~s~~l~~~l~~~-GLq  304 (385)
T KOG2862|consen  285 RRHREMSKWLKLSLEAL-GLQ  304 (385)
T ss_pred             HHHHHHHHHHHHHHHHh-Ccc
Confidence            88999999999988887 655

>PRK06917 hypothetical protein; Provisional

Probab=99.34  E-value=7.5e-10  Score=103.95  Aligned_cols=269  Identities=16%  Similarity=0.077  Sum_probs=155.9

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      ++++++|+..|.-.  ..++ .+|.+.+++++++..... .+.. .-..+.+..+++.+....  +-..+.+++++++++
T Consensus        29 dG~~ylD~~~g~~~--~~lGh~hp~v~~Ai~~ql~~~~~-~~~~-~~~~~~~~~lae~L~~~~--p~~~~~v~f~~sGsE  102 (447)
T PRK06917         29 NGNKYFDGSSGAVT--AGIGHGVKEIADAIKEQAEEVSF-VYRS-QFTSEPAEKLAKKLSDLS--PGDLNWSFFVNSGSE  102 (447)
T ss_pred             CCCEEEECchhHHh--ccCCCCCHHHHHHHHHHHhhCcC-cccc-ccCCHHHHHHHHHHHHhC--CCCCCEEEEeCChHH
Confidence            38899999888533  1233 689999999999886422 1111 011234445555554322  222358999999999


Q ss_pred             HHHHHHHHhc-------CC-CCeEEEeCCCCcchHHHHHhc-Cce------------eEEeecCCCCC--CCC-------
Q 019298          112 AIDVAMALLS-------RP-GANILLPRPGFPIYELSAAFR-HIE------------VRHFDLLPDKG--WEV-------  161 (343)
Q Consensus       112 al~~~~~~l~-------~~-gd~vl~~~p~~~~~~~~~~~~-g~~------------~~~~~~~~~~~--~~~-------  161 (343)
                      |++.+++...       .+ ..+|+...-+|++....+... +..            +..++......  +.-       
T Consensus       103 Ave~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  182 (447)
T PRK06917        103 ANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQL  182 (447)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHH
Confidence            9999998762       12 267888888888765544332 211            11111100000  000       


Q ss_pred             -CHHHHHhhhcC---CceEEEEeCC-C-CCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC
Q 019298          162 -DLDDIESLADQ---NTVALVIINP-G-NPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST  234 (343)
Q Consensus       162 -d~~~l~~~~~~---~~~~i~~~~p-~-nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~  234 (343)
                       +++.+++.+..   +..+.++.-| . +-.|.. .+.+.+++|.++|++||+++|.||++.+|...+... ....++-.
T Consensus       183 ~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~-a~~~~gv~  261 (447)
T PRK06917        183 ACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMF-AMEHWGVE  261 (447)
T ss_pred             HHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchh-hHHhcCCC
Confidence             23556666642   2345555566 3 344554 678999999999999999999999999874444321 11122222


Q ss_pred             CCEEEEccCccccCCCCC-cEEEEEEeCCCCCCCchHHHHHHhhh-----hccccCcchHHHHHHHhccchhhHHHHH--
Q 019298          235 VPILTLGSLSKRWIVPGW-RLGWFVTTDPCGMFRKPKVVERMKKY-----FDILGDPATFIQVCIMYGCLSTIMQIMI--  306 (343)
Q Consensus       235 ~~~i~~~S~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~~~l~~~~~~l~--  306 (343)
                      ++ |  .+++|.++ .|. .+|.+++++        ++.+.+...     ...+++.++++.+++ .+.|+.   +.+  
T Consensus       262 PD-i--~~~gK~l~-~G~~Pi~a~~~~~--------~i~~~~~~~~~~~~~~~T~~gnpl~~aaa-~a~l~~---l~~~~  325 (447)
T PRK06917        262 PD-I--MTLGKGLG-AGYTPIAATVVSD--------RVMEPILRGSRSIMSGHTLSANPLSAATA-LAVLEY---MEKHN  325 (447)
T ss_pred             CC-E--EEeeehhc-cCCcceEEEEEcH--------HHHHHHhccCcccccccCCCCCHHHHHHH-HHHHHH---HHHCC
Confidence            23 3  35699964 564 899998853        566665431     122456677776666 444331   112  


Q ss_pred             HHHHHHHHHHHHHHhhcC
Q 019298          307 HGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       307 ~~~~~~~~~~~~~~~L~~  324 (343)
                      ..++++++-+.+.+.|++
T Consensus       326 l~~~~~~~g~~l~~~L~~  343 (447)
T PRK06917        326 LPEKAAEKGEYLIKGLQK  343 (447)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            455555555555555543

>PRK07036 hypothetical protein; Provisional

Probab=99.34  E-value=6.1e-10  Score=105.03  Aligned_cols=269  Identities=14%  Similarity=0.120  Sum_probs=155.3

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEK-FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  110 (343)
                      +++.++|+..|.-..  .++ .+|++.+++++++.... ...+.  ....+.+..+++.+....  +-..+.++++++++
T Consensus        49 dG~~ylD~~~g~~~~--~lGh~~p~v~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~--p~~~~~v~f~~sGs  122 (466)
T PRK07036         49 DGRRYLDGIGGMWCV--NVGYGREEMADAIADQARRLPYYTPFG--DMTNAPAAELAAKLAELA--PGDLNHVFLTTGGS  122 (466)
T ss_pred             CCCEEEECcccHHhh--cCCCCCHHHHHHHHHHHHhCccccccc--ccCCHHHHHHHHHHHHhC--CCCcCEEEEeCCch
Confidence            388899998775332  133 68999999999987531 11121  012244455555554322  22346899999999


Q ss_pred             HHHHHHHHHhc------C-C-CCeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCCC--CCCCCC-----
Q 019298          111 QAIDVAMALLS------R-P-GANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPD--KGWEVD-----  162 (343)
Q Consensus       111 ~al~~~~~~l~------~-~-gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~--~~~~~d-----  162 (343)
                      +|++.+++...      . + ..+|+...-+|++....+.....             .+..++....  ...+.+     
T Consensus       123 eAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  202 (466)
T PRK07036        123 TAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFC  202 (466)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHH
Confidence            99999988752      1 1 25788888888776544332211             1122211100  001111     


Q ss_pred             ---HHHHHhhhc---CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccc-ccCC
Q 019298          163 ---LDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG-VFGS  233 (343)
Q Consensus       163 ---~~~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~-~~~~  233 (343)
                         .+.+++.+.   .+..+.++..| ....|.. .+++.++++.++|++||+++|+||++.+|...+.. ..+. .++-
T Consensus       203 ~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~-~~~~~~~gv  281 (466)
T PRK07036        203 DFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHF-FASEAVFGI  281 (466)
T ss_pred             HHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchh-hhhhhhcCC
Confidence               233444442   13344455555 5566775 57789999999999999999999999887544421 1111 1222


Q ss_pred             CCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhh--------hccccCcchHHHHHHHhccchhhHHH
Q 019298          234 TVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQVCIMYGCLSTIMQI  304 (343)
Q Consensus       234 ~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~~l~~~~~~  304 (343)
                      .+. |+  +++|.++ .| +.+|.+++++        ++.+.+...        ...+++.++++.+++ .+.|+   .+
T Consensus       282 ~PD-iv--t~gK~l~-gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa-~a~Le---~i  345 (466)
T PRK07036        282 QPD-II--TFAKGLT-SGYQPLGAVIISE--------RLLDVISGPNAKGNVFTHGFTYSGHPVACAAA-LKNIE---IM  345 (466)
T ss_pred             CCC-EE--EEccccc-cCccccEEEEEcH--------HHHHHHhcccCcCcccccCCCCCCCHHHHHHH-HHHHH---HH
Confidence            222 33  5699964 57 5899999853        666665421        122456677776666 44432   12


Q ss_pred             HH--HHHHHHHHHHHHHHhhcC
Q 019298          305 MI--HGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       305 l~--~~~~~~~~~~~~~~~L~~  324 (343)
                      .+  ..++++++-+.+.+.|+.
T Consensus       346 ~~~~l~~~~~~~g~~l~~~L~~  367 (466)
T PRK07036        346 EREGLCEHVREVGPYFEERLAS  367 (466)
T ss_pred             HhCCHHHHHHHHHHHHHHHHHH
Confidence            12  555666666666665544

>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue

Probab=99.34  E-value=1.8e-10  Score=104.46  Aligned_cols=262  Identities=16%  Similarity=0.141  Sum_probs=154.9

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++.++||..+.-.  .+++ .+|.+.+++++++.....  ........+...++++.+.+..+  -..+++++++++++
T Consensus        14 dG~~~lD~~~~~~~--~~lGh~~p~i~~ai~~~~~~~~~--~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGse   87 (339)
T PF00202_consen   14 DGREYLDFMSGYGS--VNLGHNHPEIAEAIAEQANKLNY--VSFSGFTHPEAAELAEKLAELFP--GGLDRVFFANSGSE   87 (339)
T ss_dssp             TSEEEEESSHHHHT--TTT-BT-HHHHHHHHHHHHHCSS--CSTTTSEEHHHHHHHHHHHHHSS--TTEEEEEEESSHHH
T ss_pred             CCCEEEECCCCccc--eecCCCccccchhHHHHhhhccc--ccccceeccchhhhhhhhhhccc--cccceeeeccCchH
Confidence            37889999877533  2244 679999999998875422  11123334556666666655442  25579999999999


Q ss_pred             HHHHHHHHhc------C--CCCeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCCCCCCCCCHHH-----
Q 019298          112 AIDVAMALLS------R--PGANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGWEVDLDD-----  165 (343)
Q Consensus       112 al~~~~~~l~------~--~gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~~~-----  165 (343)
                      |++.+++...      .  ...+|+...-+|++....+...+.             .+..++..       +...     
T Consensus        88 Ave~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~-------~~~~~~~~~  160 (339)
T PF00202_consen   88 AVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFP-------DPAADEEEQ  160 (339)
T ss_dssp             HHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETT-------CHHHHHHHH
T ss_pred             HHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCC-------ccchhhhHH
Confidence            9999998876      1  336899999899775443333211             12333332       2222     


Q ss_pred             -----HHhh---hcCCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCC
Q 019298          166 -----IESL---ADQNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV  235 (343)
Q Consensus       166 -----l~~~---~~~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~  235 (343)
                           +++.   ...+..+.++..| ....|.. .+.+.+++|.++|++||+++|+||++.++...+... ....++-.+
T Consensus       161 ~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~-a~~~~gv~P  239 (339)
T PF00202_consen  161 ACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFF-ASEHYGVDP  239 (339)
T ss_dssp             HHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSS-GHHHHTSSS
T ss_pred             HHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCcc-ceecccccC
Confidence                 2222   2223334455555 4555655 567899999999999999999999999986655432 222233333


Q ss_pred             CEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHH--HHHHHH
Q 019298          236 PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLE  312 (343)
Q Consensus       236 ~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~  312 (343)
                      . |++  ++|.++ .|+.+|.++++.        ++.+.+... ...++..++++.+++ .+.|+   .+.+  ..++++
T Consensus       240 D-iv~--~gK~l~-gG~p~sav~~~~--------~i~~~~~~~~~~~T~~g~p~~~aaa-~~~l~---~~~~~~~~~~~~  303 (339)
T PF00202_consen  240 D-IVT--FGKGLG-GGLPISAVLGSE--------EIMEAFQPGSHGSTFGGNPLSCAAA-LATLE---ILEEEDLLERVR  303 (339)
T ss_dssp             S-EEE--EEGGGG-TTSSEEEEEEEH--------HHHTTSCTTSSTCTTTT-HHHHHHH-HHHHH---HHHHTTHHHHHH
T ss_pred             c-ccc--cccchh-hhhhcccccccc--------hhhccccccccccccccchHhhhhh-hhHHH---hhccHHHHHHHH
Confidence            3 444  469965 459999999863        455544332 223556677776666 33332   1112  455555


Q ss_pred             HHHHHHHHhhcC
Q 019298          313 NFAGSCVPSYKL  324 (343)
Q Consensus       313 ~~~~~~~~~L~~  324 (343)
                      ++-+.+.+.|+.
T Consensus       304 ~~g~~l~~~L~~  315 (339)
T PF00202_consen  304 ELGERLREGLRE  315 (339)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            555555555553

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....

>PRK15399 lysine decarboxylase LdcC; Provisional

Probab=99.33  E-value=3.6e-10  Score=109.34  Aligned_cols=164  Identities=15%  Similarity=0.093  Sum_probs=115.0

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCC
Q 019298           79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG  158 (343)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  158 (343)
                      ..+..+.+|+.|+       .....++++|+|.++..++.+++.+||+|++++.||-+..+.+...|+..+++.... +.
T Consensus       197 i~eAe~~aA~~fg-------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~-n~  268 (713)
T PRK15399        197 HLEAEEYIARTFG-------AEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTR-NA  268 (713)
T ss_pred             HHHHHHHHHHHhC-------CCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccc-cc
Confidence            3566677777773       234667899999999999999999999999999999999999999999999986543 22


Q ss_pred             CC----CCH-----HHHHhhhcC-----CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEE-EEccCCCccc-cCC
Q 019298          159 WE----VDL-----DDIESLADQ-----NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLV-IADEVYGHLV-FGD  222 (343)
Q Consensus       159 ~~----~d~-----~~l~~~~~~-----~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~-i~D~ay~~~~-~~~  222 (343)
                      ++    ++.     +.+++.+.+     +++++++++| +-.|.+++.++   |.+.|   |+.+ ++||||+... |..
T Consensus       269 ~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~~~---I~~~~---g~~~ilvDEAhgah~~F~p  341 (713)
T PRK15399        269 LGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNTDW---IKQTL---DVPSIHFDSAWVPYTHFHP  341 (713)
T ss_pred             cCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCHHH---HHHHh---CCCEEEEeccchhhhhcCc
Confidence            22    344     888888754     2357788887 66899976554   55555   4545 6999999743 332


Q ss_pred             C--CCCccccc-CCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298          223 K--PFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVT  259 (343)
Q Consensus       223 ~--~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~i~~  259 (343)
                      .  +..++... ..+.-++++.|.+|+  ++|+.-+.++-
T Consensus       342 ~~~~~sam~~~~~aD~~i~~tQStHKt--L~alTQaS~iH  379 (713)
T PRK15399        342 IYQGKSGMSGERVPGKVIFETQSTHKM--LAAFSQASLIH  379 (713)
T ss_pred             ccCCcChhhCCCCCCeeeeeeeehhcc--ccccchheeee
Confidence            1  11222211 122345779999999  67777776543

>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.33  E-value=7e-10  Score=104.54  Aligned_cols=269  Identities=14%  Similarity=0.044  Sum_probs=156.9

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++.++|+..|.-..  .++ .+|.+.+++++++.+.... ... ....+.+..+++.+....  +...+.+++++++++
T Consensus        45 dG~~ylD~~~g~~~~--~lGh~~p~v~~Ai~~ql~~l~~~-~~~-~~~~~~~~~lae~L~~~~--p~~~~~v~f~~sGsE  118 (466)
T PRK07030         45 EGKRYLDAVSSWWVN--VFGHANPRINQRIKDQVDQLEHV-ILA-GFSHEPVIELSERLVKIT--PPGLSRCFYADNGSS  118 (466)
T ss_pred             CCCEEEEcchhHHhh--cCCCCCHHHHHHHHHHHHhcCCc-ccc-ccCCHHHHHHHHHHHHhC--CCCcCEEEEeCCcHH
Confidence            388899998775331  133 6789999999998753110 000 112234444555554321  223469999999999


Q ss_pred             HHHHHHHHhcC-------C-CCeEEEeCCCCcchHHHHHhcCce-------------eEEeecCCCC--CCCC-------
Q 019298          112 AIDVAMALLSR-------P-GANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPDK--GWEV-------  161 (343)
Q Consensus       112 al~~~~~~l~~-------~-gd~vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~--~~~~-------  161 (343)
                      |.+.+++....       + ..+|+...-+|++....+...+..             +..++.....  .++.       
T Consensus       119 Ave~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~  198 (466)
T PRK07030        119 AIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSR  198 (466)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHH
Confidence            99999987521       2 357888888887765444332211             1112111000  0011       


Q ss_pred             -CHHHHHhhhcC--CceEEEEeCC--CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCC
Q 019298          162 -DLDDIESLADQ--NTVALVIINP--GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV  235 (343)
Q Consensus       162 -d~~~l~~~~~~--~~~~i~~~~p--~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~  235 (343)
                       +++.+++.+..  +..+.++..|  ....|.. .+.+.++++.++|++||+++|.||++.++...+.- .....++-.+
T Consensus       199 ~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~-~a~~~~gv~P  277 (466)
T PRK07030        199 RMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTM-FACEQAGIRP  277 (466)
T ss_pred             HHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccc-hHHHhcCCCC
Confidence             24556666642  2334455555  4555664 67789999999999999999999999988654432 1112222222


Q ss_pred             CEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhh--------hhccccCcchHHHHHHHhccchhhHHHHH
Q 019298          236 PILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK--------YFDILGDPATFIQVCIMYGCLSTIMQIMI  306 (343)
Q Consensus       236 ~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~~~a~~~~~l~~~~~~l~  306 (343)
                      .++   +++|.++ .| +.+|.+++++        ++.+.+..        ....++..++++.+++ .+.|+   .+.+
T Consensus       278 Div---~~gKgl~-gG~~Pi~av~~~~--------ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa-~a~L~---~i~~  341 (466)
T PRK07030        278 DFL---CLSKALT-GGYLPLAAVLTTD--------TVYQAFYDDYPTLRAFLHSHSYTGNPLACAAA-LATLD---IFEQ  341 (466)
T ss_pred             CEE---eeehhcc-CCcccceEEEecH--------HHHHHHhcccccccccccCCCCCCCHHHHHHH-HHHHH---HHHh
Confidence            333   3599965 58 5999999853        66666532        1223456678777666 44432   1222


Q ss_pred             --HHHHHHHHHHHHHHhhcC
Q 019298          307 --HGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       307 --~~~~~~~~~~~~~~~L~~  324 (343)
                        ..++.++.-+.+.+.|++
T Consensus       342 ~~l~~~~~~~G~~l~~~L~~  361 (466)
T PRK07030        342 DNVIENNRALARRMAEATAH  361 (466)
T ss_pred             cCHHHHHHHHHHHHHHHHHH
Confidence              555566666666555544

>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria []

Probab=99.33  E-value=1.1e-10  Score=102.06  Aligned_cols=176  Identities=22%  Similarity=0.259  Sum_probs=113.2

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEE---ecChHHHHHHHHHHhcCCCCeEEE-eCCCCcchHHHH----------Hh
Q 019298           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFV---TSGCTQAIDVAMALLSRPGANILL-PRPGFPIYELSA----------AF  143 (343)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~---~~g~~~al~~~~~~l~~~gd~vl~-~~p~~~~~~~~~----------~~  143 (343)
                      |-+.|.+..|+.|        ..|..++   ..++++||.+++..+++|||+.+. ...-|.+.....          +.
T Consensus        55 GRd~le~iyA~vf--------gaE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e  126 (403)
T PF06838_consen   55 GRDKLERIYADVF--------GAEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKE  126 (403)
T ss_dssp             HHHHHHHHHHHHC--------T-SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGG
T ss_pred             cHHHHHHHHHHHh--------CchhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHH
Confidence            4344555555554        3454444   356799999999999999999884 556676665544          55


Q ss_pred             cCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCC-CCCcccccCHHHHHHHHHHHhhc--CcEEEEccCCCcccc
Q 019298          144 RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP-GNPCGNVYSYQHLQKLAETANKL--KTLVIADEVYGHLVF  220 (343)
Q Consensus       144 ~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p-~nptG~~~~~~~l~~l~~~~~~~--~~~~i~D~ay~~~~~  220 (343)
                      .|.....+++.+  +..+|.+.++++++++++++++... ...+-..++.++++++++++++.  ++++++|++|++|+-
T Consensus       127 ~Gi~Y~~v~L~~--dg~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE  204 (403)
T PF06838_consen  127 FGIKYREVPLTE--DGTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVE  204 (403)
T ss_dssp             GT-EEEE--B-T--TSSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTS
T ss_pred             hCceeEEEeecC--CCCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceecc
Confidence            577788888764  4569999999999999999998755 55666678889999999999875  789999999999885


Q ss_pred             CCCCCCcccccCCCCCEEEEccCccccCCC-CCcEEEEEEeCCCCCCCchHHHHHHhhh
Q 019298          221 GDKPFVPMGVFGSTVPILTLGSLSKRWIVP-GWRLGWFVTTDPCGMFRKPKVVERMKKY  278 (343)
Q Consensus       221 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~-G~r~G~i~~~~~~~~~~~~~~~~~l~~~  278 (343)
                      ..++.    ....   .++.+|+-|+-|.. ...-||+++.        .+++++....
T Consensus       205 ~~EP~----~vGA---Dl~aGSLIKNpGGgiAptGGYIaGr--------~~lVe~~a~R  248 (403)
T PF06838_consen  205 TQEPT----EVGA---DLMAGSLIKNPGGGIAPTGGYIAGR--------KDLVERAAYR  248 (403)
T ss_dssp             SS-GG----GGT----SEEEEETTSGGGTTT-SS-EEEEES--------HHHHHHHHHH
T ss_pred             ccCcc----ccch---hheeccceeCCCCCccCcCCEEech--------HHHHHHHHhh
Confidence            43321    1222   39999999996541 1345888884        4788877654

; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.

>PRK07480 putative aminotransferase; Validated

Probab=99.32  E-value=4.5e-10  Score=105.60  Aligned_cols=270  Identities=16%  Similarity=0.129  Sum_probs=151.8

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++.++|+..|.-..  +++ .+|.+.+++++++....... .......+.+..+|+.+....  +...+++++++++++
T Consensus        48 dG~~ylD~~~g~~~~--~lGh~~p~v~~Ai~~q~~~~~~~~-~~~~~~~~~~~~lae~L~~~~--p~~~~~v~f~~SGse  122 (456)
T PRK07480         48 EGNKILDGMAGLWCV--NVGYGRKELADAAARQMRELPYYN-TFFKTTHPPAIELAAKLAEVA--PPGFNHVFFTNSGSE  122 (456)
T ss_pred             CCCEEEEccchHHHh--cCCCCCHHHHHHHHHHHHhcCCcc-cccccCCHHHHHHHHHHHHhC--CCCcCEEEEeCCcHH
Confidence            388899998775331  133 68999999999987532110 000112344444555554322  223469999999999


Q ss_pred             HHHHHHHHhcC-------CC-CeEEEeCCCCcchHHHHHhc-Cce------------eEEeecCC--CCCCCCC------
Q 019298          112 AIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFR-HIE------------VRHFDLLP--DKGWEVD------  162 (343)
Q Consensus       112 al~~~~~~l~~-------~g-d~vl~~~p~~~~~~~~~~~~-g~~------------~~~~~~~~--~~~~~~d------  162 (343)
                      |++.+++....       +| .+|+...-+|++....+... |..            +..++...  ...+..+      
T Consensus       123 A~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  202 (456)
T PRK07480        123 ANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGL  202 (456)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHH
Confidence            99999887531       22 46888888887654322222 111            11111000  0000011      


Q ss_pred             --HHHHHhhhc-C--CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCC
Q 019298          163 --LDDIESLAD-Q--NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV  235 (343)
Q Consensus       163 --~~~l~~~~~-~--~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~  235 (343)
                        .+.+++.+. .  +..+.++.-| ..-.|.. .+.+.+++|.++|++||+++|.||++.+|...+... ....++-.+
T Consensus       203 ~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-a~~~~gv~P  281 (456)
T PRK07480        203 AAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWF-GSQHFGIKP  281 (456)
T ss_pred             HHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchh-hhhhcCCCC
Confidence              255554442 1  2334444555 5556775 567889999999999999999999999875444321 122222222


Q ss_pred             CEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhh----h-hccccCcchHHHHHHHhccchhhHHHHH--H
Q 019298          236 PILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK----Y-FDILGDPATFIQVCIMYGCLSTIMQIMI--H  307 (343)
Q Consensus       236 ~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~----~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~  307 (343)
                      . |  -+++|.++ .| +.+|.+++++        ++.+.+..    . ...+++.++++.+++ .+.|+   .+.+  .
T Consensus       282 D-i--v~~gK~l~-gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa-~a~L~---~l~~~~l  345 (456)
T PRK07480        282 D-L--MTIAKGLT-SGYIPMGAVGVGD--------RVAEVLIEEGGEFNHGFTYSGHPVAAAVA-LANLR---ILRDEGI  345 (456)
T ss_pred             C-e--eeeehhhc-cCCccceEEEEcH--------HHHHHHhcCCCCcccCCCCCcCHHHHHHH-HHHHH---HHHhCCH
Confidence            2 3  35799965 46 4899998853        56666631    1 223566778877777 44442   1112  4


Q ss_pred             HHHH-HHHHHHHHHhhcC
Q 019298          308 GNFL-ENFAGSCVPSYKL  324 (343)
Q Consensus       308 ~~~~-~~~~~~~~~~L~~  324 (343)
                      .++. +++-+.+.+.|++
T Consensus       346 ~~~~~~~~g~~l~~~l~~  363 (456)
T PRK07480        346 VERVRDDTGPYLQKRLRE  363 (456)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            4445 3444555454443

>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional

Probab=99.31  E-value=2.8e-10  Score=106.47  Aligned_cols=206  Identities=17%  Similarity=0.150  Sum_probs=119.6

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  110 (343)
                      +++.+||+..|.-..  .++ .+|.+.++++++++....  +.. .....++-+.+++.+      + ..+.++++++++
T Consensus        46 dG~~ylD~~~g~~~~--~lGh~~p~v~~Ai~~q~~~~~~--~~~~~~~~~~la~~l~~~~------p-~~~~v~f~~sGs  114 (431)
T PRK06209         46 DGNEYIEYGMGLRAV--GLGHAYPPVVEAVREALQDGCN--FTRPSAIELDAAESFLELI------D-GADMVKFCKNGS  114 (431)
T ss_pred             CCCEEEEccccccch--hcCCCCHHHHHHHHHHHHhCcC--CCCCCHHHHHHHHHHHHhC------C-ccceEEEecCHH
Confidence            388999998886332  233 789999999999886432  322 111113445555443      1 136899999999


Q ss_pred             HHHHHHHHHhcC-CC-CeEEEe-CCCCcchHHHH-----HhcCce--eEEeecCCCCCCCCCHHHHHhhhcC--CceEEE
Q 019298          111 QAIDVAMALLSR-PG-ANILLP-RPGFPIYELSA-----AFRHIE--VRHFDLLPDKGWEVDLDDIESLADQ--NTVALV  178 (343)
Q Consensus       111 ~al~~~~~~l~~-~g-d~vl~~-~p~~~~~~~~~-----~~~g~~--~~~~~~~~~~~~~~d~~~l~~~~~~--~~~~i~  178 (343)
                      +|++.+++.... .| .+|+.. .-+|.++....     ...+..  ..........   -|++.+++.+..  +..+.+
T Consensus       115 eA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~d~~~l~~~l~~~~~~~aav  191 (431)
T PRK06209        115 DATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFRY---NDIASLEALFEDHPGRIACV  191 (431)
T ss_pred             HHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccCC---CCHHHHHHHHHhCCCCEEEE
Confidence            999999986531 23 345544 22332211000     000100  0000000001   268888887753  234455


Q ss_pred             EeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEE
Q 019298          179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV  258 (343)
Q Consensus       179 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~  258 (343)
                      +..|-  .|...+.+.+++|.++|++||+++|+||++.++.........  .++-.+.   +.+++|.++ .|+.+|.++
T Consensus       192 i~Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~--~~gv~PD---i~t~gK~lg-gG~p~~av~  263 (431)
T PRK06209        192 ILEPA--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQK--LYGIVPD---LSCFGKALG-NGFAVSALA  263 (431)
T ss_pred             EEccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhH--HhCCCcc---eeeehhhhc-CCcccEEEE
Confidence            55553  233667889999999999999999999999876433211111  1111112   356899976 468899999


Q ss_pred             Ee
Q 019298          259 TT  260 (343)
Q Consensus       259 ~~  260 (343)
                      ++
T Consensus       264 ~~  265 (431)
T PRK06209        264 GK  265 (431)
T ss_pred             EH
Confidence            85

>PRK07483 hypothetical protein; Provisional

Probab=99.31  E-value=6.4e-10  Score=104.28  Aligned_cols=268  Identities=14%  Similarity=0.128  Sum_probs=153.3

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++.++||..|.-.  ..++ .+|.+.+++++++++.....  ......+....+++.+....  +-..+++++++++++
T Consensus        28 dG~~ylD~~~g~~~--~~lGh~~p~v~~av~~ql~~~~~~~--~~~~~~~~~~~lae~L~~~~--p~~~~~v~f~~sGsE  101 (443)
T PRK07483         28 TGKRYLDASGGAAV--SCLGHSHPRVIAAIHAQIDRLAYAH--TSFFTTEPAEALADRLVAAA--PAGLEHVYFVSGGSE  101 (443)
T ss_pred             CCCEEEEcCccHhh--hccCCCCHHHHHHHHHHHHhccCcc--ccccCCHHHHHHHHHHHHhC--CCCCCEEEEcCCcHH
Confidence            38899999888533  1233 78999999999987542101  10011234445555554322  123469999999999


Q ss_pred             HHHHHHHHhcC-------CC-CeEEEeCCCCcchHHHHHhcC-ce------------eEEeecCCC-CCC--CCC-----
Q 019298          112 AIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFRH-IE------------VRHFDLLPD-KGW--EVD-----  162 (343)
Q Consensus       112 al~~~~~~l~~-------~g-d~vl~~~p~~~~~~~~~~~~g-~~------------~~~~~~~~~-~~~--~~d-----  162 (343)
                      +++.+++....       ++ .+|+...-+|++....+.... ..            +..++.... ...  ..+     
T Consensus       102 Ave~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (443)
T PRK07483        102 AVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYG  181 (443)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHH
Confidence            99999887531       23 468888888877644333221 11            111111100 000  000     


Q ss_pred             ---HHHHHhhhc---CCceEEEEeCC-CC-Cccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298          163 ---LDDIESLAD---QNTVALVIINP-GN-PCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (343)
Q Consensus       163 ---~~~l~~~~~---~~~~~i~~~~p-~n-ptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~  233 (343)
                         ++.+++.+.   .+..+.++.-| .. -.|. ..+.+.++++.++|++||+++|.||++.++...+.- .....++-
T Consensus       182 ~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~-~a~~~~gv  260 (443)
T PRK07483        182 QRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTL-FACEEDGV  260 (443)
T ss_pred             HHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHH-HHHhhcCC
Confidence               245665453   12334455556 32 3354 467889999999999999999999999988554431 11122222


Q ss_pred             CCCEEEEccCccccCCCCC-cEEEEEEeCCCCCCCchHHHHHHhhh-----hccccCcchHHHHHHHhccchhhHHHHH-
Q 019298          234 TVPILTLGSLSKRWIVPGW-RLGWFVTTDPCGMFRKPKVVERMKKY-----FDILGDPATFIQVCIMYGCLSTIMQIMI-  306 (343)
Q Consensus       234 ~~~~i~~~S~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~~~l~~~~~~l~-  306 (343)
                      .++++   +++|.+ ..|. .+|.+++++        ++.+.+...     ...++..++++.+++ .+.|+   .+.+ 
T Consensus       261 ~PDiv---~~gK~l-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~h~~T~~gnpl~~aaa-~a~l~---~i~~~  324 (443)
T PRK07483        261 APDLV---TIAKGL-GAGYQPIGAVLASD--------RIYDAIADGSGFFQHGHTYLGHATACAAA-LAVQR---VIAED  324 (443)
T ss_pred             CCCee---eehhhh-ccCccccEEEEEcH--------HHHHHHhcCCCccccCCCCCCCHHHHHHH-HHHHH---HHHhc
Confidence            22333   459996 4575 899999853        566665421     223556778777666 44432   1112 


Q ss_pred             -HHHHHHHHHHHHHHhhc
Q 019298          307 -HGNFLENFAGSCVPSYK  323 (343)
Q Consensus       307 -~~~~~~~~~~~~~~~L~  323 (343)
                       ..++.++.-+.+.+.|+
T Consensus       325 ~l~~~~~~~g~~l~~~L~  342 (443)
T PRK07483        325 GLLANVRARGEQLRARLR  342 (443)
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence             45555555555555554

>PRK06148 hypothetical protein; Provisional

Probab=99.31  E-value=6.4e-10  Score=113.85  Aligned_cols=264  Identities=13%  Similarity=0.006  Sum_probs=154.2

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCC-CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFN-GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      ++.++||..|..    .++ .+|++.+++++++.....+ .|.     .+.+..+|+.+....  +-..+.+++++++++
T Consensus       623 G~~ylD~~~g~~----~lGH~hp~v~~Ai~~q~~~l~~~~~~~-----~~~~~~lAe~L~~~~--p~~~~~v~f~nSGsE  691 (1013)
T PRK06148        623 GRAYLDCFNNVC----HVGHAHPRVVAAAARQAARLNTNTRYL-----HDAIVAYAERLTATL--PDGLTVAFFVNSGSE  691 (1013)
T ss_pred             CCEEEEcccChh----hcCCCCHHHHHHHHHHHhhcCCcCCcC-----CHHHHHHHHHHHHhC--CCCcCEEEEeCCcHH
Confidence            888999988752    234 7899999999998753221 222     233444455444322  112368899999999


Q ss_pred             HHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhc-Cc------------eeEEeecC--CCCCCCC-C-------HHHH
Q 019298          112 AIDVAMALLSR--PGANILLPRPGFPIYELSAAFR-HI------------EVRHFDLL--PDKGWEV-D-------LDDI  166 (343)
Q Consensus       112 al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~--~~~~~~~-d-------~~~l  166 (343)
                      |++.+++....  ...+|+...-+|++....+... +.            .+..++..  ....+.. +       .+.+
T Consensus       692 A~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l  771 (1013)
T PRK06148        692 ANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESV  771 (1013)
T ss_pred             HHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHH
Confidence            99999987632  2357888888887764332221 10            01111100  0000110 1       1334


Q ss_pred             Hhhhc---C--CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEE
Q 019298          167 ESLAD---Q--NTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT  239 (343)
Q Consensus       167 ~~~~~---~--~~~~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~  239 (343)
                      ++.+.   .  +..+.+|.-| ..-.|. ..+.+.++++.++|++||+++|.||++.+|...+........++-.+. | 
T Consensus       772 ~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PD-i-  849 (1013)
T PRK06148        772 AEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPD-I-  849 (1013)
T ss_pred             HHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcc-e-
Confidence            44442   1  2344455555 444455 467899999999999999999999999988554432222222222222 3 


Q ss_pred             EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh--hccccCcchHHHHHHHhccchhhHHHHH--HHHHHHHHH
Q 019298          240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--FDILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLENFA  315 (343)
Q Consensus       240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~~~~  315 (343)
                       .+++|.+| .|+.+|.++++        +++.+.+...  ...+++.++++.+++ .+.|+   .+.+  ..++.+++-
T Consensus       850 -vt~gK~lg-gG~Plgav~~~--------~ei~~~~~~g~~~~~Tf~gnpla~aaa-~a~L~---~i~~e~l~~~~~~~G  915 (1013)
T PRK06148        850 -VTMGKPIG-NGHPMGAVVTT--------REIADSFDNGMEYFNTFGGNPVSCAIG-LAVLD---IIEDEDLQRNALEIG  915 (1013)
T ss_pred             -eeeccccc-CCcceEEEEEc--------HHHHhhccCCCccccCCCCCHHHHHHH-HHHHH---HHhhccHHHHHHHHH
Confidence             34699965 68999999985        3666665432  223556778877776 34332   1212  555666666


Q ss_pred             HHHHHhhcC
Q 019298          316 GSCVPSYKL  324 (343)
Q Consensus       316 ~~~~~~L~~  324 (343)
                      +.+.+.|++
T Consensus       916 ~~l~~~L~~  924 (1013)
T PRK06148        916 NYLLAGLRE  924 (1013)
T ss_pred             HHHHHHHHH
Confidence            666666554

>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.30  E-value=2.5e-09  Score=100.86  Aligned_cols=248  Identities=14%  Similarity=0.061  Sum_probs=146.1

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCC---CCCCcEEEecC
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYK---LTPNDVFVTSG  108 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~---~~~~~i~~~~g  108 (343)
                      ++++++|+..|.-..  .++ .+|.+.+++++++..-.. .. ...-..+.+..+++.+.......   -..+.++++++
T Consensus        62 dG~~ylD~~~g~~~~--~lGh~~p~i~~Ai~~q~~~l~~-~~-~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~s  137 (472)
T PRK08742         62 DGRRYLDAVSSWWTN--LFGHAEPRIGAAIAAQAGELEQ-VM-LAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADN  137 (472)
T ss_pred             CCCEEEEcCccHHhc--cCCCCCHHHHHHHHHHHHhCCC-cc-ccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCC
Confidence            388899998885331  233 689999999998864211 00 00111233455555554322110   12369999999


Q ss_pred             hHHHHHHHHHHhcC-------C-CCeEEEeCCCCcchHHHHHhcCce-------------eEEeecCCCC--CCCC----
Q 019298          109 CTQAIDVAMALLSR-------P-GANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPDK--GWEV----  161 (343)
Q Consensus       109 ~~~al~~~~~~l~~-------~-gd~vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~--~~~~----  161 (343)
                      +++|++.+++....       + ..+|+...-+|++....+...+..             +..++.....  .++.    
T Consensus       138 GSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~  217 (472)
T PRK08742        138 GSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAED  217 (472)
T ss_pred             chHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHH
Confidence            99999999987631       2 267888888888765444333211             1111111000  0011    


Q ss_pred             ----CHHHHHhhhcC--CceEEEEeCC--CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298          162 ----DLDDIESLADQ--NTVALVIINP--GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (343)
Q Consensus       162 ----d~~~l~~~~~~--~~~~i~~~~p--~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~  232 (343)
                          +++.+++.+..  +..+.++.-|  .+-.|.. .+++.++++.++|++||+++|.||++.+|...+.- .....++
T Consensus       218 ~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~-~a~e~~g  296 (472)
T PRK08742        218 YALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTL-FACEQAG  296 (472)
T ss_pred             HHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccc-hHHHhcC
Confidence                24566666642  3344455566  5666764 67899999999999999999999999988655532 1222222


Q ss_pred             CCCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhh-------hhccccCcchHHHHHHHhccc
Q 019298          233 STVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK-------YFDILGDPATFIQVCIMYGCL  298 (343)
Q Consensus       233 ~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~a~~~~~l  298 (343)
                      -.+.++   +++|.++ .| +.+|.+++++        ++.+.+..       ....+++.++++.+++ .+.|
T Consensus       297 v~PDiv---~~gKgl~-gG~~Plaav~~~~--------ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa-~a~L  357 (472)
T PRK08742        297 VMPDLL---CLSKGLT-GGFLPLSAVLATQ--------QLYDAFLDDSRERAFLHSHSYTGNPLACAAA-LATL  357 (472)
T ss_pred             CCCCEE---EEccccc-CCCCCcceeeccH--------HHHHHhhccCccCccCcCCCCCccHHHHHHH-HHHH
Confidence            222333   3599964 56 4899998853        56665532       1223456677776666 4443

>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.27  E-value=2.9e-09  Score=100.35  Aligned_cols=268  Identities=16%  Similarity=0.096  Sum_probs=150.8

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEe-cChH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVT-SGCT  110 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~~~-~g~~  110 (343)
                      ++.++|+..|.-..  .++ .+|.+.+++++++.+.......  ....+.+..+++.+......... .+.++++ ++++
T Consensus        62 G~~ylD~~~g~~~~--~lGh~~p~v~~Ai~~ql~~~~~~~~~--~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGS  137 (464)
T PRK06938         62 GRQFIDCLAGAGTL--ALGHNHPVVIEAIQQVLADELPLHTL--DLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGT  137 (464)
T ss_pred             CCEEEEccCCcccc--ccCCCCHHHHHHHHHHHHhhhccccc--ccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcH
Confidence            88899998886332  233 7899999999998643211110  11123344444444331111111 1356565 6889


Q ss_pred             HHHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhc-Cc------------eeEEeecCCCCC--CC--------CCHHH
Q 019298          111 QAIDVAMALLSR--PGANILLPRPGFPIYELSAAFR-HI------------EVRHFDLLPDKG--WE--------VDLDD  165 (343)
Q Consensus       111 ~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~--~~--------~d~~~  165 (343)
                      +|.+.+++....  ...+|+...-+|++....+... +.            ++..++......  ++        .+++.
T Consensus       138 EAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  217 (464)
T PRK06938        138 DAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHY  217 (464)
T ss_pred             HHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHH
Confidence            999999987531  2367888888887765443332 10            112222111000  00        12566


Q ss_pred             HHhhhcC-----CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEE
Q 019298          166 IESLADQ-----NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPIL  238 (343)
Q Consensus       166 l~~~~~~-----~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i  238 (343)
                      +++.+.+     +..+.++.-| ..-.|.+ .+.+.++++.++|++||+++|.||++.+|...+.- .....++-.++++
T Consensus       218 l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~-~a~e~~gv~PDiv  296 (464)
T PRK06938        218 LENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKM-FAFEHAGIIPDVV  296 (464)
T ss_pred             HHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHH-HHHHhcCCCCCEE
Confidence            7777653     1345556666 4445665 56899999999999999999999999988554431 1112222222333


Q ss_pred             EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHH--HHHHHHHHH
Q 019298          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLENFA  315 (343)
Q Consensus       239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~~~~  315 (343)
                         +++|.++ .|+.+|.+++.+        ++ +.+... ...+++.++++.+++ .+.|+   .+.+  ..++.++.-
T Consensus       297 ---~~gKglg-gG~PlsAv~~~~--------~~-~~~~~~~~~~T~~gnpla~Aaa-~a~L~---~l~~~~l~~~~~~~G  359 (464)
T PRK06938        297 ---VLSKAIG-GSLPLAVVVYRE--------WL-DTWQPGAHAGTFRGNQMAMAAG-SATLR---YIKEHRLAEHAAAMG  359 (464)
T ss_pred             ---Eeecccc-CCCceEEEeehh--------Hh-hccCCCCCCCCCCcCHHHHHHH-HHHHH---HHHHhHHHHHHHHHH
Confidence               3599975 579999999853        22 333211 223556677777666 44432   1111  444555555


Q ss_pred             HHHHHhhc
Q 019298          316 GSCVPSYK  323 (343)
Q Consensus       316 ~~~~~~L~  323 (343)
                      +.+.+.|+
T Consensus       360 ~~l~~~L~  367 (464)
T PRK06938        360 ERLREHLR  367 (464)
T ss_pred             HHHHHHHH
Confidence            55555444

>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]

Probab=99.18  E-value=2.5e-09  Score=97.70  Aligned_cols=268  Identities=19%  Similarity=0.152  Sum_probs=163.2

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCC---CCCCCCCCHHHHHHHHHHHhhhCCCC-CCCCcEEEecC
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN---GYAPTAGLPLTRRAIAEYLSRDLPYK-LTPNDVFVTSG  108 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~Y~~~~g~~~lr~~ia~~~~~~~~~~-~~~~~i~~~~g  108 (343)
                      ++++++|=..|.=.. +.--..+++.++++++++.-...   .....+ ..+|-+.+++..      + -+-++|++++|
T Consensus        42 ~G~r~lDg~sg~W~~-~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~P-a~~LA~~L~~~a------P~~~l~~vFf~~s  113 (449)
T COG0161          42 DGRRYLDGMSGLWCV-NHGHGRPEIAEAIKKQLDKLPHVMFGGFTHEP-AIELAEKLAELA------PEGGLDHVFFTDS  113 (449)
T ss_pred             CCCEEEecccHHHHh-hcCcCCHHHHHHHHHHHHhCCchhhcccCCch-HHHHHHHHHHhC------CCCCccEEEEeCC
Confidence            377888876665221 11236899999999999864211   111111 345556666655      2 23679999999


Q ss_pred             hHHHHHHHHHHhc-------CCC-CeEEEeCCCCcchHHHHHhcCc--------------eeEEeecCC---C---CCCC
Q 019298          109 CTQAIDVAMALLS-------RPG-ANILLPRPGFPIYELSAAFRHI--------------EVRHFDLLP---D---KGWE  160 (343)
Q Consensus       109 ~~~al~~~~~~l~-------~~g-d~vl~~~p~~~~~~~~~~~~g~--------------~~~~~~~~~---~---~~~~  160 (343)
                      +|++++.+++...       +|. .+++.-..+|.+-...+...|.              .+..++...   .   +.+.
T Consensus       114 GSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~  193 (449)
T COG0161         114 GSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGD  193 (449)
T ss_pred             chHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCCh
Confidence            9999999998863       232 3488888888654333222221              111111111   0   1111


Q ss_pred             ----CCHHHHHhhhcC---CceEEEEeCC--CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccc
Q 019298          161 ----VDLDDIESLADQ---NTVALVIINP--GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV  230 (343)
Q Consensus       161 ----~d~~~l~~~~~~---~~~~i~~~~p--~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~  230 (343)
                          -..++|++.+..   .+.+.++.-|  ..-+|..+ ++..|+++.++|++||+++|.||+-.+|...|+-+.. ..
T Consensus       194 ~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~-e~  272 (449)
T COG0161         194 EEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFAC-EH  272 (449)
T ss_pred             HHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhh-hh
Confidence                125566666643   5566677777  45588875 5578999999999999999999999998877653221 11


Q ss_pred             cCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh------hccccCcchHHHHHHHhccchhhHHH
Q 019298          231 FGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY------FDILGDPATFIQVCIMYGCLSTIMQI  304 (343)
Q Consensus       231 ~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~a~~~~~l~~~~~~  304 (343)
                      ++-.+.++   +++|..+..=+.+|.+++++        ++.+.+..-      ...+++.+|++-+++ .+-|   .-+
T Consensus       273 ~gi~PDi~---~~aKGLT~GY~Pl~a~l~~~--------~I~~~~~~~~~~~f~HG~TYsghPlacAaA-la~L---~i~  337 (449)
T COG0161         273 AGIVPDIL---CLAKGLTGGYLPLSAVLTSD--------RIYEAFSDGDAGAFMHGHTYSGNPLACAAA-LANL---DIL  337 (449)
T ss_pred             cCCCCCee---eecccccccchhhHhHhhhH--------HHHHHHhcccCCeeccCCccccCHHHHHHH-HHHH---HHH
Confidence            22222233   46899665557788777753        566666543      234566777766666 2221   223


Q ss_pred             HH--HHHHHHHHHHHHHHhhcC
Q 019298          305 MI--HGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       305 l~--~~~~~~~~~~~~~~~L~~  324 (343)
                      .+  +.++.++.-..+.+.|..
T Consensus       338 e~e~l~~~~~~~~~~l~~~L~~  359 (449)
T COG0161         338 EEEDLLERVAEIGAYLQAGLQA  359 (449)
T ss_pred             HhcCHHHHHHHHHHHHHHHHHH
Confidence            32  777777777777777775

>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]

Probab=99.18  E-value=3.4e-09  Score=98.82  Aligned_cols=165  Identities=15%  Similarity=0.106  Sum_probs=121.8

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCC
Q 019298           79 LPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK  157 (343)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~  157 (343)
                      ..+..+.+|+.+        ..+ ..++++|+|.++..++.+++.+||+|+++++||-+........|+..+++......
T Consensus        72 i~eAqe~aA~~f--------gAd~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np  143 (557)
T COG1982          72 IKEAQELAARVF--------GADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNP  143 (557)
T ss_pred             HHHHHHHHHHHh--------CCCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCc
Confidence            356777777777        345 66789999999999999999999999999999999888889999998888654433


Q ss_pred             ----CCCCCHHHHHhhhcC--Cc-eEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccc
Q 019298          158 ----GWEVDLDDIESLADQ--NT-VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV  230 (343)
Q Consensus       158 ----~~~~d~~~l~~~~~~--~~-~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~  230 (343)
                          -.+++.+.+++++.+  .. +++++.+|.. .|.+++   ++++.+++...++++.+|+++....-.....+.  +
T Consensus       144 ~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~--~  217 (557)
T COG1982         144 LYGIIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYN---LRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPE--S  217 (557)
T ss_pred             cccccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeec---HHHHHHHHhhcCceEEhhhcCcccccccccCcc--h
Confidence                145789999887644  33 6677777754 677755   466677777999999999999864322111111  2


Q ss_pred             cCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298          231 FGSTVPILTLGSLSKRWIVPGWRLGWFVT  259 (343)
Q Consensus       231 ~~~~~~~i~~~S~sK~~~~~G~r~G~i~~  259 (343)
                      ....+.++++.|.+|.  ++++..+.++-
T Consensus       218 ~~~~~~~~~tqS~HK~--l~alSQaS~iH  244 (557)
T COG1982         218 ALNGGADFVTQSTHKL--LAALSQASMIH  244 (557)
T ss_pred             hhhcCceEEEechhhh--hhhhhhhHHHh
Confidence            2224578999999999  56666665443

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.17  E-value=9.5e-09  Score=103.71  Aligned_cols=191  Identities=18%  Similarity=0.148  Sum_probs=124.9

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCC------CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC-hHHHHHH---HHHHh-
Q 019298           52 HTTHVATEAVAEALLSEKFNGYAPT------AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG-CTQAIDV---AMALL-  120 (343)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~Y~~~------~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g-~~~al~~---~~~~l-  120 (343)
                      ..++.+.+.+..   ...+..|.|.      +|..++...+.+++.+..|.    +++.+.++ ++.+...   +++.+ 
T Consensus       510 ~~~p~~~~~~~~---~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG~----d~~sl~~~~ga~ge~agL~a~r~~~  582 (954)
T PRK05367        510 KLNAAAEMIPIT---WPEFANLHPFAPAEQAAGYRELIDQLEAWLAEITGY----DAVSLQPNAGAQGEYAGLLAIRAYH  582 (954)
T ss_pred             cCCHHHHHHHHh---CccccccCCCChHHHHHHHHHHHHHHHHHHHHHHCC----CCEEECccHHHHHHHHHHHHHHHHh
Confidence            344555444333   2233445553      24556777777777665553    45666554 4444423   33332 


Q ss_pred             cCCCC----eEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC---CceEEEEeCCCCCcccccCHH
Q 019298          121 SRPGA----NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       121 ~~~gd----~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~~~~p~nptG~~~~~~  193 (343)
                      .++|+    +|++++..|++....+...|.+++.++.+.  +..+|+++|++.+.+   ++.+|++.+|++-.+..   +
T Consensus       583 ~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~--~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e---~  657 (954)
T PRK05367        583 ESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDE--NGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFE---E  657 (954)
T ss_pred             hccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCC--CCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeec---C
Confidence            24554    699999999888888999999999998763  357999999998865   35667777887664444   4


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccC----CCCCcEEEEEEe
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI----VPGWRLGWFVTT  260 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~----~~G~r~G~i~~~  260 (343)
                      ++++|+++|+++|+++++|.++......-.   ....+   +-.++..|++|+|+    ..|..+|.+.+.
T Consensus       658 ~I~eI~~i~h~~G~~v~VDgA~~~al~~l~---~pg~~---GADi~~~s~HK~f~~P~G~GGPg~G~l~vr  722 (954)
T PRK05367        658 TIREICEIVHEHGGQVYLDGANMNAQVGLA---RPGDI---GADVSHLNLHKTFCIPHGGGGPGVGPIGVK  722 (954)
T ss_pred             CHHHHHHHHHHcCCEEEEECcChhhccCCC---Chhhc---CCCEEEecCcccCCCCcCCCCCceEEEeec
Confidence            689999999999999999999964221111   11122   23388999999975    344558888774

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.17  E-value=2.4e-09  Score=106.41  Aligned_cols=170  Identities=16%  Similarity=0.158  Sum_probs=118.2

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHH---HHHHhc-----CCCCeEEEeCCCCcchHHHHHhcCcee
Q 019298           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV---AMALLS-----RPGANILLPRPGFPIYELSAAFRHIEV  148 (343)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~---~~~~l~-----~~gd~vl~~~p~~~~~~~~~~~~g~~~  148 (343)
                      +|..++...+.+|+.+..|.+  .-.+...+|+ .+-..   +++...     ...++|+++.-.|+.....+...|+++
T Consensus       526 qG~lq~i~elq~~l~eltGmd--~~Sl~p~aGA-~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~V  602 (939)
T TIGR00461       526 EGYQELIAQLEKWLCSITGFD--AISLQPNSGA-QGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQV  602 (939)
T ss_pred             HHHHHHHHHHHHHHHHHHCCC--CcccCCchHH-HHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEE
Confidence            345566666777776655543  2233333443 33332   223211     123689999999988888899999999


Q ss_pred             EEeecCCCCCCCCCHHHHHhhhcC---CceEEEEeCCCCCcccccCHHH-HHHHHHHHhhcCcEEEEccCCCccccCCCC
Q 019298          149 RHFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQH-LQKLAETANKLKTLVIADEVYGHLVFGDKP  224 (343)
Q Consensus       149 ~~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~-l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~  224 (343)
                      +.++.+  .++.+|+++|++.+++   ++.+|++.+|+| +|..   ++ +++|+++|+++|.++++|.++..-...   
T Consensus       603 v~V~~d--~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~---e~~I~eI~~iah~~G~~v~VDgAq~~al~~---  673 (939)
T TIGR00461       603 VPVNCD--QDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVF---EPTIQHACDIVHSFGGQVYLDGANMNAQVG---  673 (939)
T ss_pred             EEeccC--CCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Ccee---cccHHHHHHHHHHcCCEEEEEecChhhCCC---
Confidence            999875  3457999999999973   788899999999 7888   55 999999999999999999998541111   


Q ss_pred             CCcccccCCCCCEEEEccCccccC----CCCCcEEEEEEeC
Q 019298          225 FVPMGVFGSTVPILTLGSLSKRWI----VPGWRLGWFVTTD  261 (343)
Q Consensus       225 ~~~~~~~~~~~~~i~~~S~sK~~~----~~G~r~G~i~~~~  261 (343)
                      .....   ..+-.++++|.+|+|+    ..|..+|.+.+..
T Consensus       674 l~~Pg---~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~  711 (939)
T TIGR00461       674 LTSPG---DLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKS  711 (939)
T ss_pred             CCCcc---ccCCCEEEecCCccCCCCCCCCCCCeEEEEEhh
Confidence            11112   2233499999999776    3566789988863

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.17  E-value=3.1e-08  Score=93.34  Aligned_cols=268  Identities=15%  Similarity=0.076  Sum_probs=148.3

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEecChHH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQ  111 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~  111 (343)
                      ++.++||..|.-..  .++ .+|++.+++++++.........  ....+.+..+|+.+.......... ..+++++++++
T Consensus        57 G~~ylD~~~g~~~~--~lGH~~p~v~~Ai~~q~~~~~~~~~~--~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsE  132 (459)
T PRK06931         57 GNQYLDCLAGAGTL--ALGHNHPDVLQSIQDVLTSGLPLHTL--DLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGAD  132 (459)
T ss_pred             CCEEEEcccchhhc--cCCCCCHHHHHHHHHHHhhhcccccc--ccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHH
Confidence            88899998886332  233 7889999999998753211110  112345555666664422111011 23455688899


Q ss_pred             HHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCCCCC--CC----CCHHHH----
Q 019298          112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKG--WE----VDLDDI----  166 (343)
Q Consensus       112 al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~--~~----~d~~~l----  166 (343)
                      |.+.+++...  ....+|+...-+|++....+.....             .+..++......  +.    -+.+.+    
T Consensus       133 Ave~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (459)
T PRK06931        133 AVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYF  212 (459)
T ss_pred             HHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHH
Confidence            9999988753  2336788888889877655543211             112222110000  00    012222    


Q ss_pred             HhhhcC-----CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEE
Q 019298          167 ESLADQ-----NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT  239 (343)
Q Consensus       167 ~~~~~~-----~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~  239 (343)
                      ++.+..     +..+.++.-| ..-.|.. .+.+.++++.++|++||+++|.||+..+|...+.. .....++-.+.++ 
T Consensus       213 ~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~-~a~~~~gv~PDiv-  290 (459)
T PRK06931        213 ENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKM-FAFEHAGIEPDII-  290 (459)
T ss_pred             HHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchH-HHhhhcCCCCCEE-
Confidence            222221     2234455556 4445665 57899999999999999999999999988544431 1222222222333 


Q ss_pred             EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHH--HHHHHHHHHH
Q 019298          240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLENFAG  316 (343)
Q Consensus       240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~~~~~  316 (343)
                        +++|.++ .|+.+|.+++++        + ++.+... ...+++.++++.+++ .+.|+   .+.+  ..++.++.-+
T Consensus       291 --t~gK~l~-gG~Pi~av~~~~--------~-~~~~~~~~~~~T~~gnpla~aaa-la~L~---~l~~~~l~~~~~~~G~  354 (459)
T PRK06931        291 --VMSKAVG-GGLPLAVLGIKK--------E-FDAWQPGGHTGTFRGNQLAMATG-LTTLK---ILKEENLAQNAAERGE  354 (459)
T ss_pred             --Eeccccc-CCcceeeeeeHH--------H-HhhccCCCCCCCCCCCHHHHHHH-HHHHH---HHHhCCHHHHHHHHHH
Confidence              4599965 579999877642        2 2333222 223556778776666 34332   1112  4445555555


Q ss_pred             HHHHhhc
Q 019298          317 SCVPSYK  323 (343)
Q Consensus       317 ~~~~~L~  323 (343)
                      ++.+.|+
T Consensus       355 ~l~~~L~  361 (459)
T PRK06931        355 WLKAQLA  361 (459)
T ss_pred             HHHHHHH
Confidence            5544444

>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]

Probab=99.17  E-value=2.3e-09  Score=94.14  Aligned_cols=266  Identities=18%  Similarity=0.141  Sum_probs=165.1

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc--CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS--EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  110 (343)
                      ++++++|+..|..... .-..+|.+.+++.+++..  +.+..|... -..++-+++++.+      +-+-..++++++++
T Consensus        48 ~G~ryLD~f~Gi~tvs-lGHchP~v~~a~~kQl~~l~H~t~~~~~~-pi~~~Ae~L~s~~------P~~l~~vfF~nsGs  119 (442)
T KOG1404|consen   48 EGRRYLDAFGGIVTVS-LGHCHPDVVAAAVKQLKKLYHTTSGYLNP-PIHDLAEALVSKL------PGDLKVVFFVNSGS  119 (442)
T ss_pred             CCceeehhhCCeEEEE-cCCCChHHHHHHHHhhhhhEEeeccccCC-cHHHHHHHHHHhC------CCCceEEEEecCCc
Confidence            3788889888875432 134789999999988843  244566653 3578888888888      44556789999999


Q ss_pred             HHHHHHHHHhc--CCCCeEEEeCCCCcchHHHHH-hcCceeEEeecC-----------C--CCC-CCCC---------HH
Q 019298          111 QAIDVAMALLS--RPGANILLPRPGFPIYELSAA-FRHIEVRHFDLL-----------P--DKG-WEVD---------LD  164 (343)
Q Consensus       111 ~al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~-~~g~~~~~~~~~-----------~--~~~-~~~d---------~~  164 (343)
                      +|.+++++...  ...-.++--..+|.+...... ..+......+..           |  ..+ |+=+         .+
T Consensus       120 EANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~  199 (442)
T KOG1404|consen  120 EANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAK  199 (442)
T ss_pred             hHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHH
Confidence            99999987753  122356666677765443322 222221111110           0  000 0000         13


Q ss_pred             HHHhhhc---CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEE
Q 019298          165 DIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT  239 (343)
Q Consensus       165 ~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~  239 (343)
                      +++..+.   ..+.+.++.-+ ..-.|.+ +++-.+++..++|+++|.++|.||+..+|...| .   +..++..+-+--
T Consensus       200 ~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG-~---~wgfe~h~v~PD  275 (442)
T KOG1404|consen  200 ELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG-H---MWGFESHGVVPD  275 (442)
T ss_pred             HHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc-c---cccccccCCCcc
Confidence            3333332   24445555555 6666777 677899999999999999999999999987666 3   333444444445


Q ss_pred             EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-c-cccCcchHHHHHHHhccchhhHHHHH---HHHHHHHH
Q 019298          240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-D-ILGDPATFIQVCIMYGCLSTIMQIMI---HGNFLENF  314 (343)
Q Consensus       240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~a~~~~~l~~~~~~l~---~~~~~~~~  314 (343)
                      |-|++|.. ..|+.+|.++++        +++.+-+.+.. . .++..+|++.++. .+.|.    .++   ++++.++.
T Consensus       276 IvTmAKgi-GnG~Pl~AVvtt--------~EIa~v~~~~~~~fnTyggnP~a~avg-~aVL~----Vikee~LqE~aa~v  341 (442)
T KOG1404|consen  276 IVTMAKGI-GNGFPLGAVVTT--------PEIADVLNQKSSHFNTYGGNPVACAVG-LAVLK----VIKEENLQENAAEV  341 (442)
T ss_pred             HHHHHhhc-cCCCcceeeecC--------HHHHHHHHhccccccccCCCchhHHHH-HHHHH----HHHHHhHHHHHHHH
Confidence            66899994 577999999985        47777776554 2 2556777777776 33321    221   44444455


Q ss_pred             HHHHHHhhcC
Q 019298          315 AGSCVPSYKL  324 (343)
Q Consensus       315 ~~~~~~~L~~  324 (343)
                      -.++.+.|.+
T Consensus       342 G~yl~~~l~~  351 (442)
T KOG1404|consen  342 GSYLLEKLAA  351 (442)
T ss_pred             HHHHHHHHHH
Confidence            5555555554

>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.15  E-value=1.6e-09  Score=95.01  Aligned_cols=266  Identities=15%  Similarity=0.098  Sum_probs=168.1

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC------CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE------KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT  106 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~  106 (343)
                      ++.+++||....   +..+...+++++.....++.-      .-..|+.-.-+.++.+.||+|++        .+.-++-
T Consensus        92 ~G~~~~N~aS~N---fL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G--------~E~aivY  160 (467)
T KOG1358|consen   92 DGKDVLNFASAN---FLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMG--------TEDAIVY  160 (467)
T ss_pred             cCceeecccchh---hhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhC--------Ccceeee
Confidence            366777777765   344667888888877777641      22356665567789999999994        3444455


Q ss_pred             cChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCc------------
Q 019298          107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT------------  174 (343)
Q Consensus       107 ~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~------------  174 (343)
                      +-+-.++..++.+++++||.+.+.+-.........+.....+.++..       -|.+.+++...+.+            
T Consensus       161 s~gF~ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkh-------ndm~~lerll~E~~~~~~K~~k~~~~  233 (467)
T KOG1358|consen  161 SYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKH-------NDMEDLERLLPEQEDEDQKNPKKALT  233 (467)
T ss_pred             ccccchhhhcchhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecC-------CCHHHHHHhccCcchhhhhccccccc
Confidence            55567777788999999999999998888888777777777777753       25666765543211            


Q ss_pred             eE-EEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCC--CCCCcccccCCCCCEEEEccCccccCCCC
Q 019298          175 VA-LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD--KPFVPMGVFGSTVPILTLGSLSKRWIVPG  251 (343)
Q Consensus       175 ~~-i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~--~~~~~~~~~~~~~~~i~~~S~sK~~~~~G  251 (343)
                      +. +++..-.-+||.+.+   +.+|+++..|+...+|+||.|+..+.+.  .........+..+-.++++|+.-+++..|
T Consensus       234 Rrfiv~EGl~~N~g~i~p---l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G  310 (467)
T KOG1358|consen  234 RRFIVVEGLYANTGDICP---LPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG  310 (467)
T ss_pred             eEEEEEEeeccCCCcccc---cHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC
Confidence            22 333444678999954   6777888889999999999999876653  33322222333334589999999987777


Q ss_pred             CcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHH-HHHHHHHHHHHHHHHHhhcCCCCce
Q 019298          252 WRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQI-MIHGNFLENFAGSCVPSYKLIPELI  329 (343)
Q Consensus       252 ~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~-l~~~~~~~~~~~~~~~~L~~~~g~~  329 (343)
                         |++++..  .+.    ..+++...... +.+.++....++ ..++.- .++ -+..+.++.....+.+.|....++.
T Consensus       311 ---gFc~G~~--~i~----~hQrLSg~~Y~fSAslPp~la~aa-~~ai~i-~~~~p~~~~~L~~k~~~~H~~l~~~s~~~  379 (467)
T KOG1358|consen  311 ---GFCAGKS--FIA----DHQRLSGSGYCFSASLPPYLAGAA-IKAILI-EEWNPEIVQPLRAKVAKFHAALSSNSGFI  379 (467)
T ss_pred             ---ceeecce--eeE----eeeeccccceeeeccCchhhhhhH-HHHHHH-HhhCcchhhhhhccccccchhhhcCCceE
Confidence               8877743  111    22333333222 334455544444 121110 111 1155556666666667777655555


Q ss_pred             e
Q 019298          330 N  330 (343)
Q Consensus       330 ~  330 (343)
                      +
T Consensus       380 v  380 (467)
T KOG1358|consen  380 V  380 (467)
T ss_pred             E
Confidence            4

>TIGR01366 serC_3 phosphoserine aminotransferase, putative

Probab=99.12  E-value=4.3e-09  Score=96.36  Aligned_cols=241  Identities=13%  Similarity=0.047  Sum_probs=139.6

Q ss_pred             CCCcHHHHHHHHHHHhcC-CCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEe-cChHHHHHHHHHHhcCCCC
Q 019298           51 FHTTHVATEAVAEALLSE-KFNGYAP--TAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVT-SGCTQAIDVAMALLSRPGA  125 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~-~~~~Y~~--~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~-~g~~~al~~~~~~l~~~gd  125 (343)
                      ...++++++++....... ..+.+.+  ..-..+.|+.+++++      +.+. .+|+++ .|++.+++.++.++..+ +
T Consensus        12 ~~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~------~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~   84 (361)
T TIGR01366        12 SKVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELF------SLPDGYEVILGNGGATAFWDAATFGLIEK-K   84 (361)
T ss_pred             cCCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHh------CCCCCceEEEECCchhHHHHHHHHhcccc-c
Confidence            457788888876531100 0122222  123456778888887      3333 478886 55999999999998743 3


Q ss_pred             eEEEeCCCCc-chHHHHHhc--CceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHH
Q 019298          126 NILLPRPGFP-IYELSAAFR--HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA  202 (343)
Q Consensus       126 ~vl~~~p~~~-~~~~~~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~  202 (343)
                      .+.+..-.|. .+...+...  +.++..++...  +..++.     .+++++++|++++..|.||...+.+++      +
T Consensus        85 ~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~lV~~~h~et~tG~~~pi~~I------~  151 (361)
T TIGR01366        85 SLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADP--GSAPEP-----QADPGVDVIAWAHNETSTGVAVPVRRP------E  151 (361)
T ss_pred             ccEEecCHHHHHHHHHHHhhhccCCceEEecCC--CCCCCC-----ccCCCCCEEEEcccCCccceecccccc------c
Confidence            3333333342 233344431  22555555432  222332     345688999999999999999776543      4


Q ss_pred             hhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh----
Q 019298          203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY----  278 (343)
Q Consensus       203 ~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~----  278 (343)
                      +++|+++++|.+....    ..+..+..     -.+++.|..|.++.+| .++.+++++        +++++++..    
T Consensus       152 ~~~g~~~iVDavqs~g----~~~idv~~-----~D~~~~s~~K~lg~~~-Gl~~~~~s~--------~~~~~~~~~~~~~  213 (361)
T TIGR01366       152 GSDDALVVIDATSGAG----GLPVDIAE-----TDVYYFAPQKNFASDG-GLWLAIMSP--------AALERIEAIAASG  213 (361)
T ss_pred             ccCCCeEEEEcCcccc----CCCCCHHH-----CCEEEEEchhhcCCCC-ceEEEEECH--------HHHhhhhcccCCC
Confidence            7899999999998862    22223322     2378899999999874 245555543        334333311    


Q ss_pred             ----------------h-ccccCcchHHHHHHHhccchhhHHH--HH-HHHHHHHHHHHHHHhhcCCCCce
Q 019298          279 ----------------F-DILGDPATFIQVCIMYGCLSTIMQI--MI-HGNFLENFAGSCVPSYKLIPELI  329 (343)
Q Consensus       279 ----------------~-~~~~~~~~~~~~a~~~~~l~~~~~~--l~-~~~~~~~~~~~~~~~L~~~~g~~  329 (343)
                                      . ..+.+.++.....+...+++...+.  ++ ..++.++..+.+.+.+.+++++.
T Consensus       214 ~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~  284 (361)
T TIGR01366       214 RWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYAT  284 (361)
T ss_pred             CCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence                            0 0122333333222223443322211  22 56888888888999998885555

This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.

>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.12  E-value=2.3e-08  Score=88.59  Aligned_cols=270  Identities=17%  Similarity=0.094  Sum_probs=162.3

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  110 (343)
                      ++.++||+..++-....+ ...|++.+++.+++..-  .++.|-... .-++.+.+.+.+.+     -.++.|+++++++
T Consensus        54 ~g~EyiD~~ssw~~~~~G-hanpev~ral~~q~~k~~hs~~~~~t~e-av~l~~~l~~~~~~-----~~~~rvff~nsGT  126 (433)
T KOG1401|consen   54 DGKEYIDFTSSWAVTILG-HANPEVARALAEQAKKLGHSSNGYFTLE-AVELEEVLSAVLGK-----GSAERVFFCNSGT  126 (433)
T ss_pred             CcceeeeeccceeccccC-CCCHHHHHHHHHHHhhheeccCccccHH-HHHHHHHHHhcccC-----CCccEEEEecCCc
Confidence            388999999888543332 35899999998887642  122222211 33444555554432     2788999999999


Q ss_pred             HHHHHHHHHhcC------CC--CeEEEeCCCCcchHHHHHh-cCceeEEeec---CCCC--CCCCCHHHHHhhhcCCc--
Q 019298          111 QAIDVAMALLSR------PG--ANILLPRPGFPIYELSAAF-RHIEVRHFDL---LPDK--GWEVDLDDIESLADQNT--  174 (343)
Q Consensus       111 ~al~~~~~~l~~------~g--d~vl~~~p~~~~~~~~~~~-~g~~~~~~~~---~~~~--~~~~d~~~l~~~~~~~~--  174 (343)
                      +|+..+++...+      +-  .+++-..-+|++-...+.. .+......+.   .++-  .--=|..++++.++.+.  
T Consensus       127 eAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~  206 (433)
T KOG1401|consen  127 EANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGE  206 (433)
T ss_pred             HHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCc
Confidence            999999987642      11  2488888888653332222 2211111111   1110  00115888888887654  


Q ss_pred             eEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC-CcccccCCCCCEEEEccCccccCCCC
Q 019298          175 VALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF-VPMGVFGSTVPILTLGSLSKRWIVPG  251 (343)
Q Consensus       175 ~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~-~~~~~~~~~~~~i~~~S~sK~~~~~G  251 (343)
                      .+.++.-| ....|.. .++|.+..|.+.|+++|+++|.||++.+|...+..- ..+....++     |.++.|.+ ..|
T Consensus       207 IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PD-----I~t~aK~L-~gG  280 (433)
T KOG1401|consen  207 IAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPD-----ITTVAKPL-GGG  280 (433)
T ss_pred             eEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCc-----ceeehhhc-cCC
Confidence            23344455 6777776 677999999999999999999999999976654321 111111121     34578994 577


Q ss_pred             CcEEEEEEeCCCCCCCchHHHHHHhhhh----ccccCcchHHHHHHHhccchh--hHHHHH-HHHHHHHHHHHHHHhhcC
Q 019298          252 WRLGWFVTTDPCGMFRKPKVVERMKKYF----DILGDPATFIQVCIMYGCLST--IMQIMI-HGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       252 ~r~G~i~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~a~~~~~l~~--~~~~l~-~~~~~~~~~~~~~~~L~~  324 (343)
                      +.+|..++.+        ++.+.+.--.    ..+++.++++-.++ ...|+.  ..++++ +...-+..|+.+.+.+.+
T Consensus       281 lPigA~~v~~--------kV~~~i~~~~~l~hg~Tf~gnpLacsa~-~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~  351 (433)
T KOG1401|consen  281 LPIGATGVRD--------KVAEMISPGDHLYHGGTFSGNPLACSAG-IKVLDELKDPETLKNVSKIGKELRKLLDEYLKK  351 (433)
T ss_pred             ceeEEEeehH--------HHHhhcCCCCccccCcccCCChhhhhHH-HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            9999998854        4666554332    33556677776666 333332  133433 444455556666666554

>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type

Probab=99.11  E-value=5.7e-08  Score=93.42  Aligned_cols=159  Identities=14%  Similarity=0.161  Sum_probs=113.8

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC----C-----
Q 019298           53 TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR----P-----  123 (343)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~----~-----  123 (343)
                      ..+.+...+...+-+.+...|...++...+++.+.+++.+..|.+-  ..=.+|+|+|.+...++....+    |     
T Consensus        95 ~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~--~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~  172 (608)
T TIGR03811        95 LMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKN--GWGHIVADGSLANLEGLWYARNIKSLPFAMKE  172 (608)
T ss_pred             CHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCC--CCeEEeCChHHHHHHHHHHHHHhhhccchhhh
Confidence            4555655554444444445565566788999999999999888653  2334788888887765544311    0     


Q ss_pred             -------------------------------------------C------CeEEEeCCCCcchHHHHHhcCce---eEEe
Q 019298          124 -------------------------------------------G------ANILLPRPGFPIYELSAAFRHIE---VRHF  151 (343)
Q Consensus       124 -------------------------------------------g------d~vl~~~p~~~~~~~~~~~~g~~---~~~~  151 (343)
                                                                 |      -+++++.-.|.++...+...|+.   ++.+
T Consensus       173 ~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~V  252 (608)
T TIGR03811       173 VKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPV  252 (608)
T ss_pred             ccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEe
Confidence                                                       0      05788888899999999999995   7788


Q ss_pred             ecCCCCCCCCCHHHHHhhhcC----C-ce-EEEEeCCCCCcccccCHHHHHHHHHHH---hhcCc--EEEEccCCCcc
Q 019298          152 DLLPDKGWEVDLDDIESLADQ----N-TV-ALVIINPGNPCGNVYSYQHLQKLAETA---NKLKT--LVIADEVYGHL  218 (343)
Q Consensus       152 ~~~~~~~~~~d~~~l~~~~~~----~-~~-~i~~~~p~nptG~~~~~~~l~~l~~~~---~~~~~--~~i~D~ay~~~  218 (343)
                      +++  .++.+|+++|++.+.+    + +. +|+-+-....+|.+   +++++|+++|   +++|+  ++.+|.||+++
T Consensus       253 pvD--~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~Gai---Dpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~  325 (608)
T TIGR03811       253 PVD--SNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAV---DGIDKIVALRNKLMKEGIYFYLHVDAAYGGY  325 (608)
T ss_pred             ecC--CCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCccc---CCHHHHHHHHHHHHHcCCceeEeeeccccch
Confidence            775  4578999999988753    2 33 34445667899999   7777777776   77887  69999999985

This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.

>PRK08297 L-lysine aminotransferase; Provisional

Probab=99.10  E-value=3.9e-08  Score=92.35  Aligned_cols=209  Identities=14%  Similarity=0.188  Sum_probs=116.8

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATE--AVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~  109 (343)
                      +++.++|+..|.-.  ..++ .+|.+.+  ++++++..-............+....+++.+.+..+ +-..+.|++++++
T Consensus        43 dG~~ylD~~~g~~~--~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~-p~~~~~v~f~~SG  119 (443)
T PRK08297         43 TGRRYLDMFTFFAS--SALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLG-DPELPHLFFVDGG  119 (443)
T ss_pred             CCCEeeecccCHhh--hcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcC-CCCCCEEEEeCch
Confidence            48889999877533  1233 7788888  888888642110000000111223334443332111 1134699999999


Q ss_pred             HHHHHHHHHHhcC--------C------CCeEEEeCCCCcchHHHHHhcCc-ee-E--EeecC-------CCC-----CC
Q 019298          110 TQAIDVAMALLSR--------P------GANILLPRPGFPIYELSAAFRHI-EV-R--HFDLL-------PDK-----GW  159 (343)
Q Consensus       110 ~~al~~~~~~l~~--------~------gd~vl~~~p~~~~~~~~~~~~g~-~~-~--~~~~~-------~~~-----~~  159 (343)
                      ++|++.+++....        .      ..+|+...-+|++....+..... .. .  ..+..       +..     ..
T Consensus       120 sEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (443)
T PRK08297        120 ALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGE  199 (443)
T ss_pred             HHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCccc
Confidence            9999999987621        1      25799999899876554443321 10 0  00000       000     00


Q ss_pred             C---C------CHHHHHhhhcC--CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCC
Q 019298          160 E---V------DLDDIESLADQ--NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV  226 (343)
Q Consensus       160 ~---~------d~~~l~~~~~~--~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~  226 (343)
                      .   .      +++.+++.+..  +..+.++..| ....|.+ .+.+.+++|.++|++||+++|.||++.+|...+... 
T Consensus       200 ~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-  278 (443)
T PRK08297        200 DLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAW-  278 (443)
T ss_pred             ccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHH-
Confidence            0   0      23445555532  2334455556 4445654 788999999999999999999999999875544321 


Q ss_pred             cccccCCCCCEEEEccCccccC
Q 019298          227 PMGVFGSTVPILTLGSLSKRWI  248 (343)
Q Consensus       227 ~~~~~~~~~~~i~~~S~sK~~~  248 (343)
                      ....++-.+. |+  +++|.+.
T Consensus       279 a~~~~gv~PD-iv--~~gK~l~  297 (443)
T PRK08297        279 AYQQLGVRPD-IV--AFGKKTQ  297 (443)
T ss_pred             HHHhcCCCCC-EE--Eeccccc
Confidence            1111222222 33  4799963

>TIGR03251 LAT_fam L-lysine 6-transaminase

Probab=99.05  E-value=2.1e-07  Score=87.19  Aligned_cols=186  Identities=12%  Similarity=0.112  Sum_probs=108.3

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHH--HHHHHHHhcCCCCCCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVAT--EAVAEALLSEKFNGYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g  108 (343)
                      ++++++|+..|.-..  .++ .+|.+.  +++++++.+........ ....+.+ ..+++.+.+... +-..+.++++++
T Consensus        36 dG~~ylD~~~g~~~~--~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~-~~l~~~l~~~~~-~~~~~~v~f~~s  111 (431)
T TIGR03251        36 DGRRYLDMFSFFASM--ALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAM-ARFVDTFARVLG-DPALPHLFFIEG  111 (431)
T ss_pred             CCCChhhcccChhhc--CCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHH-HHHHHHHHHhcC-CCCcCEEEEeCC
Confidence            388999998886432  233 678888  88888876532100011 1122223 333333322111 113468999999


Q ss_pred             hHHHHHHHHHHhcC--------C------CCeEEEeCCCCcchHHHHHhc-Cce-eE--Eeec-------CC-------C
Q 019298          109 CTQAIDVAMALLSR--------P------GANILLPRPGFPIYELSAAFR-HIE-VR--HFDL-------LP-------D  156 (343)
Q Consensus       109 ~~~al~~~~~~l~~--------~------gd~vl~~~p~~~~~~~~~~~~-g~~-~~--~~~~-------~~-------~  156 (343)
                      +++|++.+++....        .      +.+|+...-+|++....+... |.. ..  ..+.       .+       .
T Consensus       112 GsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  191 (431)
T TIGR03251       112 GALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDA  191 (431)
T ss_pred             cHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccc
Confidence            99999999887631        1      367998998887765444332 211 00  0110       00       0


Q ss_pred             CCCC-------CCHHHHHhhhc---CCceEEEEeCCCCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCC
Q 019298          157 KGWE-------VDLDDIESLAD---QNTVALVIINPGNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGD  222 (343)
Q Consensus       157 ~~~~-------~d~~~l~~~~~---~~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~  222 (343)
                      ....       -+++++++.+.   +++.++++.-.....|.. .+.+.+++|.++|++||+++|+||++.++...+
T Consensus       192 ~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG  268 (431)
T TIGR03251       192 PNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTG  268 (431)
T ss_pred             cccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccc
Confidence            0000       12344455553   234444444335666765 678999999999999999999999999876554

Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.

>PLN02452 phosphoserine transaminase

Probab=99.05  E-value=4.6e-08  Score=89.15  Aligned_cols=257  Identities=10%  Similarity=0.010  Sum_probs=149.0

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--------CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--------KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV  105 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~  105 (343)
                      ..++++|+-|=      ...++.+++++.+.+-+-        ..+...+  ...++-+.+.+.+++.++.+-+.+-+++
T Consensus         5 ~~~~~~f~pGP------~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~--~f~~i~~~~~~~L~~l~~~p~~y~v~~l   76 (365)
T PLN02452          5 QGRVFNFSAGP------ATLPANVLAKAQAELYNWEGSGMSVMEMSHRGK--EFLSIIQKAEADLRELLDIPDNYEVLFL   76 (365)
T ss_pred             CCceEeeeCCC------CCCCHHHHHHHHHHHhcccccCccccccCCCch--HHHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence            34467777663      457899999888765321        1112222  1233444444444444443223234566


Q ss_pred             ecChHHHHHHHHHHhcCCCCeEEEeCCCCcc--hHHHHHhcCceeEEeecCCC-CCCCCCHHHHHhhhcCCceEEEEeCC
Q 019298          106 TSGCTQAIDVAMALLSRPGANILLPRPGFPI--YELSAAFRHIEVRHFDLLPD-KGWEVDLDDIESLADQNTVALVIINP  182 (343)
Q Consensus       106 ~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~i~~~~p  182 (343)
                      ..|++.+++.+...|+.+|+++++..-+..+  +...++.+|...+....... ....+++++++.  +++.+.+.+++.
T Consensus        77 ~Gsgt~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~hn  154 (365)
T PLN02452         77 QGGASTQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEWEL--TPDAKFVHICAN  154 (365)
T ss_pred             eCccHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHcCC--CCCCcEEEECCC
Confidence            6888999999999999999998887766644  23455666653333321111 112356666532  335677777777


Q ss_pred             CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCC
Q 019298          183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP  262 (343)
Q Consensus       183 ~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~  262 (343)
                      ...||+.++  ++.++.      ++++|+|.+.....    .+..+..++     +...|..|.+|.+|  +|.++++. 
T Consensus       155 ETstGv~~~--~~~~i~------~~~lvVDa~Ss~g~----~pidv~~~~-----v~~~saqK~lGP~G--l~~v~vr~-  214 (365)
T PLN02452        155 ETIHGVEFK--DYPDVG------NVPLVADMSSNFLS----KPVDVSKYG-----VIYAGAQKNVGPSG--VTIVIIRK-  214 (365)
T ss_pred             CCCCcEecC--cccccC------CCeEEEECCccccC----cccCHHHcC-----EEEEecccccCCCC--eEEEEEcH-
Confidence            789999643  244432      37999999987632    222332222     34469999999888  68887754 


Q ss_pred             CCCCCchHHHHHHhhh-------------hccccCcchHHHHHHHhccchhhHH--HHH-HHHHHHHHHHHHHHhhcCCC
Q 019298          263 CGMFRKPKVVERMKKY-------------FDILGDPATFIQVCIMYGCLSTIMQ--IMI-HGNFLENFAGSCVPSYKLIP  326 (343)
Q Consensus       263 ~~~~~~~~~~~~l~~~-------------~~~~~~~~~~~~~a~~~~~l~~~~~--~l~-~~~~~~~~~~~~~~~L~~~~  326 (343)
                             ++++++...             .+....++.....++ ..+|+...+  -++ ..++.+++.+.+.+.|.+.+
T Consensus       215 -------~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l-~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~  286 (365)
T PLN02452        215 -------DLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMC-GLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESN  286 (365)
T ss_pred             -------HHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHH-HHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCC
Confidence                   333332211             111123333433443 444443221  122 88888999999999999876


Q ss_pred             Cc
Q 019298          327 EL  328 (343)
Q Consensus       327 g~  328 (343)
                      |+
T Consensus       287 G~  288 (365)
T PLN02452        287 GF  288 (365)
T ss_pred             Cc
Confidence            76

>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]

Probab=99.04  E-value=4.7e-08  Score=87.42  Aligned_cols=240  Identities=17%  Similarity=0.048  Sum_probs=155.8

Q ss_pred             cceeEeccCCCCCCC-CCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHH-HHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           35 KKVISLAMGDPTVHS-CFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR-RAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr-~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      .++||.+...-.... .-...+++.+++...++...-..|.-..|...-| ..+++.+.   + ....+.++++++.+.+
T Consensus        20 ~~viN~~G~v~~t~lG~s~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~---~-~~~aea~~ivnnn~aA   95 (395)
T COG1921          20 RRVINAIGTVLMTNLGRSLYSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLC---G-LTGAEAAAIVNNNAAA   95 (395)
T ss_pred             hhhhhhhhhheeccCCCccCCHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHh---c-ccchhheeeECCcHHH
Confidence            455666542211111 1346788899999888765222444433332222 23444442   2 2356888999999999


Q ss_pred             HHHHHHHhcCCCCeEE-----EeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcc
Q 019298          113 IDVAMALLSRPGANIL-----LPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG  187 (343)
Q Consensus       113 l~~~~~~l~~~gd~vl-----~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG  187 (343)
                      +..++.++.+++..|+     ++ +..+...+.++..|.+++.+...    ......+++.++++++.+++-..-+|- |
T Consensus        96 Vll~~~al~~~~EvVis~g~lV~-gg~~~v~d~~~~aG~~l~EvG~t----n~t~~~d~~~AIne~ta~llkV~s~~~-~  169 (395)
T COG1921          96 VLLTLNALAEGKEVVVSRGELVE-GGAFRVPDIIRLAGAKLVEVGTT----NRTHLKDYELAINENTALLLKVHSSNY-G  169 (395)
T ss_pred             HHHHHhhhccCCeEEEEcccccc-CCCCChhHHHHHcCCEEEEeccc----CcCCHHHHHHHhccCCeeEEEEeeccc-c
Confidence            9999988876544443     23 57788899999999999988643    235688999999999988875555443 3


Q ss_pred             cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCC
Q 019298          188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR  267 (343)
Q Consensus       188 ~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~  267 (343)
                      +.-. =..++++++|+++|+++++|.+-+..+.....   .+.+-..+-.++++|-.|.|+  |.+-|.+++.       
T Consensus       170 f~~~-l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~---l~~~la~GaDLV~~SgdKllg--GPqaGii~Gk-------  236 (395)
T COG1921         170 FTGM-LSEEELVEIAHEKGLPVIVDLASGALVDKEPD---LREALALGADLVSFSGDKLLG--GPQAGIIVGK-------  236 (395)
T ss_pred             cccc-ccHHHHHHHHHHcCCCEEEecCCccccccccc---hhHHHhcCCCEEEEecchhcC--CCccceEech-------
Confidence            3311 13466788888999999999999876542222   222323334499999999965  5668888884       


Q ss_pred             chHHHHHHhhhh-ccccCcchHHHHHHHhccch
Q 019298          268 KPKVVERMKKYF-DILGDPATFIQVCIMYGCLS  299 (343)
Q Consensus       268 ~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~  299 (343)
                       +++++++++.. .....+.+...+++ .++|.
T Consensus       237 -KelI~~lq~~~l~Ralrv~K~tla~l-~~aLe  267 (395)
T COG1921         237 -KELIEKLQSHPLKRALRVDKETLAAL-EAALE  267 (395)
T ss_pred             -HHHHHHHHhhhhhhhhhcCcHhHHHH-HHHHH
Confidence             47998888663 33456666666666 44443

>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type

Probab=99.03  E-value=1.8e-08  Score=94.38  Aligned_cols=210  Identities=14%  Similarity=0.119  Sum_probs=120.3

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHH-HhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEA-LLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~-~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g  108 (343)
                      +++.++|+..|.-..  .++ .+|.+.++++++ ....  ....|.. ....++-+.+.+.+.+..  +-..+.++++++
T Consensus        56 dG~~ylD~~sg~~~~--~lGh~~p~i~~Ai~~q~~~~~l~~~~~~~~-~~~~~la~~l~~~l~~~~--p~~~~~v~f~~S  130 (464)
T TIGR00699        56 DGNRLLDLYSQISSI--PIGYNNPALLKAAQSPEMATTLINRPALGN-FPSKDWAKILKEGILKVA--PKGQDQVWTGMS  130 (464)
T ss_pred             CCCEEEEccCCHhhh--cCCCCCHHHHHHHHHHHHHHhhcccccCCc-HHHHHHHHHHHHhHHhhC--CCCcCEEEEeCC
Confidence            388899998886442  233 789999999984 2322  1112222 112234444433222111  123368999999


Q ss_pred             hHHHHHHHHHHhcC--------------------------C---CCeEEEeCCCCcchHHHHHhc-Cce-----------
Q 019298          109 CTQAIDVAMALLSR--------------------------P---GANILLPRPGFPIYELSAAFR-HIE-----------  147 (343)
Q Consensus       109 ~~~al~~~~~~l~~--------------------------~---gd~vl~~~p~~~~~~~~~~~~-g~~-----------  147 (343)
                      +++|++.+++....                          +   ..+|+...-+|++....+... +..           
T Consensus       131 GsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~  210 (464)
T TIGR00699       131 GSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFD  210 (464)
T ss_pred             cHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCC
Confidence            99999999987621                          1   126998999997765544332 211           


Q ss_pred             eEEeecCCC-CCC-----------CCCHHHHHhhhcC--CceEEEEeCC-CCCccccc-CHHHHHHHHHHHhhcCcEEEE
Q 019298          148 VRHFDLLPD-KGW-----------EVDLDDIESLADQ--NTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIA  211 (343)
Q Consensus       148 ~~~~~~~~~-~~~-----------~~d~~~l~~~~~~--~~~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~~i~  211 (343)
                      ...++.... ..+           .-+++.+++.+..  +..+.++..| ....|... +.+.++++.++|++||+++|+
T Consensus       211 ~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~  290 (464)
T TIGR00699       211 WPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIV  290 (464)
T ss_pred             ceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence            011111100 000           0135556666642  2234444555 56668775 788999999999999999999


Q ss_pred             ccCCCccccCCCCCCcccccCCC--CCEEEEccCccccCCCC
Q 019298          212 DEVYGHLVFGDKPFVPMGVFGST--VPILTLGSLSKRWIVPG  251 (343)
Q Consensus       212 D~ay~~~~~~~~~~~~~~~~~~~--~~~i~~~S~sK~~~~~G  251 (343)
                      ||++.++...+.. .....++-.  +. |  .+++|.++..|
T Consensus       291 DEV~tGfGrtG~~-fa~e~~gv~~~PD-i--~t~gK~lg~gG  328 (464)
T TIGR00699       291 DEVQTGVGATGKF-WAHEHWNLDDPPD-M--VTFSKKFQTAG  328 (464)
T ss_pred             eeeeeCCCCCcch-hHHHhcCCCCCCC-E--EEehhhhccCC
Confidence            9999887554431 111112111  22 3  45699975555

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=98.97  E-value=3.5e-07  Score=91.07  Aligned_cols=243  Identities=19%  Similarity=0.118  Sum_probs=143.6

Q ss_pred             ceeEeccCCCCCCCCCC--CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEecChHHH
Q 019298           36 KVISLAMGDPTVHSCFH--TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVTSGCTQA  112 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~~~~g~~~a  112 (343)
                      +.+|+..+.-.  .+++  .+|++.+++++++..-.  .+....-..+....+|+.+.+..  +-+ .++|++++++++|
T Consensus       366 ~ylD~~sg~w~--~~lG~h~~p~I~~Ai~~Qa~rl~--hv~~~~~~hepa~~LAe~L~~~~--~~~~l~rVffs~sGSeA  439 (817)
T PLN02974        366 QQFDACASWWT--QGPDPTLQPELARAVAYAAGRYG--HVMFPENVHEPALRAAELLLGGP--GKGWASRVFFSDNGSTA  439 (817)
T ss_pred             eEEEcchhHHH--hCCCcCCCHHHHHHHHHHHhhCC--ccccCccCCHHHHHHHHHHHhcc--CCCCCCEEEECCchHHH
Confidence            67888777533  2233  58999999999987531  11111112344455666554311  111 3689999999999


Q ss_pred             HHHHHHHhcC---------------------CCCeEEEeCCCCcchHHHHHhcCce---------------eEEe--ecC
Q 019298          113 IDVAMALLSR---------------------PGANILLPRPGFPIYELSAAFRHIE---------------VRHF--DLL  154 (343)
Q Consensus       113 l~~~~~~l~~---------------------~gd~vl~~~p~~~~~~~~~~~~g~~---------------~~~~--~~~  154 (343)
                      ++.+++...+                     ...+|+...-+|++-...+...+..               ...+  +..
T Consensus       440 vE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~  519 (817)
T PLN02974        440 IEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTV  519 (817)
T ss_pred             HHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCcc
Confidence            9999886521                     1246888888887644433333210               0001  000


Q ss_pred             -----------CCC----------CCC-----CC------------HHHHHhhhc-------CCceEEEEeCC--CCCcc
Q 019298          155 -----------PDK----------GWE-----VD------------LDDIESLAD-------QNTVALVIINP--GNPCG  187 (343)
Q Consensus       155 -----------~~~----------~~~-----~d------------~~~l~~~~~-------~~~~~i~~~~p--~nptG  187 (343)
                                 +..          .|.     .+            .+.+++.+.       .+..+.++.-|  +.-.|
T Consensus       520 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGG  599 (817)
T PLN02974        520 GMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGG  599 (817)
T ss_pred             ccccccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCC
Confidence                       000          000     00            144555553       13345566666  57778


Q ss_pred             ccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCC-CcEEEEEEeCCCCC
Q 019298          188 NVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGM  265 (343)
Q Consensus       188 ~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~  265 (343)
                      ..+ +.+.++++.++|++||+++|.||++.+|...|... ....++-.++ |+  +++|.+ ..| +.+|.+++++    
T Consensus       600 mi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~f-a~e~~gv~PD-Ii--~~gKgL-tgG~~Plaa~l~~~----  670 (817)
T PLN02974        600 MLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVES-AWELLGCKPD-IA--CYAKLL-TGGLVPLAATLATE----  670 (817)
T ss_pred             cccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchh-hHHhcCCCCC-EE--eecccc-cCCCCccEEEEEcH----
Confidence            875 67899999999999999999999999987665432 1222222222 33  468995 467 6999999863    


Q ss_pred             CCchHHHHHHhh------h-hccccCcchHHHHHHHhccc
Q 019298          266 FRKPKVVERMKK------Y-FDILGDPATFIQVCIMYGCL  298 (343)
Q Consensus       266 ~~~~~~~~~l~~------~-~~~~~~~~~~~~~a~~~~~l  298 (343)
                          ++.+.+..      + ...+++.++++.+++ .+.|
T Consensus       671 ----~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaa-la~L  705 (817)
T PLN02974        671 ----EVFEAFRGPSKLDALLHGHSYTAHPMGCAAA-AKAL  705 (817)
T ss_pred             ----HHHHhhccccccCCcccCCCCCcCHHHHHHH-HHHH
Confidence                56666631      1 233566777777766 4444

>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]

Probab=98.97  E-value=4.3e-08  Score=83.38  Aligned_cols=175  Identities=20%  Similarity=0.210  Sum_probs=117.4

Q ss_pred             CCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEe-CCCCcchHH----------
Q 019298           72 GYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP-RPGFPIYEL----------  139 (343)
Q Consensus        72 ~Y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~-~p~~~~~~~----------  139 (343)
                      +|+- .-|-..|.+..|+.++.    ....-+..+.+ ++.||..++..+++|||+.+.. .--|.....          
T Consensus        59 GYGydD~GRdtLe~vyA~vf~a----E~a~VRpq~is-GTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~g  133 (416)
T COG4100          59 GYGYDDLGRDTLERVYAQVFGA----EAALVRPQIIS-GTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQG  133 (416)
T ss_pred             CCCccccchhHHHHHHHHHhcc----ccceeeeeeec-chhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcc
Confidence            4442 24666777777777742    11111333444 5899999999999999998754 334444433          


Q ss_pred             HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCC-CCCcccccCHHHHHHHHHHHhhc--CcEEEEccCCC
Q 019298          140 SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP-GNPCGNVYSYQHLQKLAETANKL--KTLVIADEVYG  216 (343)
Q Consensus       140 ~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p-~nptG~~~~~~~l~~l~~~~~~~--~~~~i~D~ay~  216 (343)
                      +++..|...+.+++..  +..+|.+.++..+++++++|.+... ....--.++.+++++++++.++.  ++++++|.+|+
T Consensus       134 SL~dfgi~Y~~v~Lt~--~gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYG  211 (416)
T COG4100         134 SLKDFGIKYKAVPLTA--DGKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYG  211 (416)
T ss_pred             cHHHhCcceeeccccc--CCcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccch
Confidence            3455566777777764  4569999999999999999988654 33333346679999999999875  79999999999


Q ss_pred             ccccCCCCCCcccccCCCCCEEEEccCccccCCCCC-cEEEEEEe
Q 019298          217 HLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW-RLGWFVTT  260 (343)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~-r~G~i~~~  260 (343)
                      +|+-.-++.. +      +..++.+|+-|+=|..=. .-||+.+.
T Consensus       212 EFvE~~EPt~-v------GaDliAGSLIKNpGGgiaktGGYiaGk  249 (416)
T COG4100         212 EFVEEKEPTH-V------GADLIAGSLIKNPGGGIAKTGGYIAGK  249 (416)
T ss_pred             hhhhccCccc-c------chhhhccceeeCCCCceeeccceeech
Confidence            9885433221 1      123888999999443212 23667663

>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type

Probab=98.96  E-value=9.8e-08  Score=87.12  Aligned_cols=238  Identities=13%  Similarity=-0.016  Sum_probs=138.9

Q ss_pred             HHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc-CCCCeEEEeCCCCc
Q 019298           57 ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RPGANILLPRPGFP  135 (343)
Q Consensus        57 ~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~~gd~vl~~~p~~~  135 (343)
                      +.+++++.+-.  .+.+.+  ...++-+.+.+.+++.++.+-+.+-++++.|++.+++.++.+++ ++|++|++.. .|+
T Consensus        19 ~~~~~~~~~~~--~~HRs~--~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG   93 (374)
T TIGR01365        19 SIEELKNAPLG--RSHRSK--LGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFG   93 (374)
T ss_pred             hHHHHhhhhcc--cCcCCH--HHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHH
Confidence            55566554322  122322  23444444445555445532222335678889999999999998 5888998865 554


Q ss_pred             ch-H-HHHHhcCc-eeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEc
Q 019298          136 IY-E-LSAAFRHI-EVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD  212 (343)
Q Consensus       136 ~~-~-~~~~~~g~-~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D  212 (343)
                      .- . ..++..|+ ++..+..  +.+..+++++++.    . +.+++++.-..||+..+.   ++++..+  ++.++|+|
T Consensus        94 ~r~~~eia~~~g~~~v~~l~~--~~g~~~~~~~ve~----~-~~v~~vhnETSTGv~npv---~~i~~~~--~~~lliVD  161 (374)
T TIGR01365        94 KGWVTDVTKQLKLPDVRVLEA--EYGKLPDLKKVDF----K-NDVVFTWNGTTSGVRVPN---GDFIPAD--REGLTICD  161 (374)
T ss_pred             HHHHHHHHHhcCCCCcEEEcC--CCCCCCCHHHcCC----C-CCEEEecCCCchheeccc---ccccccc--CCCcEEEE
Confidence            33 3 56777888 4676653  3455688888873    1 235677777899999765   3444222  48999999


Q ss_pred             cCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh---------------
Q 019298          213 EVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK---------------  277 (343)
Q Consensus       213 ~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~---------------  277 (343)
                      .+-+...    .+..+.     +-.+++.|..|.+++++ .+++++++++        .+++.+.               
T Consensus       162 avSs~g~----~~l~~d-----~iDv~~tgsQK~L~~pp-Gls~v~vs~~--------Al~~~~~~~~y~~~~~~~~~~~  223 (374)
T TIGR01365       162 ATSAAFA----QDLDYH-----KLDVVTFSWQKVLGGEG-AHGMLILSPR--------AVARLESYTPAWPLPKIFRLTK  223 (374)
T ss_pred             ccchhcC----CCCChh-----HCcEEEEechhccCCCC-ceEEEEECHH--------HHHHHhhcCCCCCChhhhcccc
Confidence            9987632    212222     12378888999998844 2567777542        3332221               


Q ss_pred             -------hh-ccccCcchH-HHHHHHhccchhhHH--HHH-HHHHHHHHHHHHHHhhcCCCCcee
Q 019298          278 -------YF-DILGDPATF-IQVCIMYGCLSTIMQ--IMI-HGNFLENFAGSCVPSYKLIPELIN  330 (343)
Q Consensus       278 -------~~-~~~~~~~~~-~~~a~~~~~l~~~~~--~l~-~~~~~~~~~~~~~~~L~~~~g~~~  330 (343)
                             .. ..+..+++. ...++ ..+|....+  -++ +.++++++.+.++++++.++.+..
T Consensus       224 ~~~~~~~~~~~~t~~TP~v~~l~a~-~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~  287 (374)
T TIGR01365       224 GGKLNKKIFEGSTINTPSMLCVEDW-LDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHF  287 (374)
T ss_pred             ccchhhhhhcCCCCCChHHHHHHHH-HHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence                   01 112222222 22222 222221111  122 889999999999999999832554

This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.

>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]

Probab=98.92  E-value=3.6e-07  Score=82.37  Aligned_cols=245  Identities=15%  Similarity=0.134  Sum_probs=160.4

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcE-EEecChHHHHHHHHHHhc----C-CC---CeEEEeCCCCcchHHHHHhcCce
Q 019298           77 AGLPLTRRAIAEYLSRDLPYKLTPNDV-FVTSGCTQAIDVAMALLS----R-PG---ANILLPRPGFPIYELSAAFRHIE  147 (343)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i-~~~~g~~~al~~~~~~l~----~-~g---d~vl~~~p~~~~~~~~~~~~g~~  147 (343)
                      ++...+..++.+++...++.+  .+.+ ..|+|+|+++....+...    . .|   ..++.+.-.+..+...++..+.+
T Consensus       116 p~~~~~e~~~Vnm~~~L~~~~--~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~  193 (491)
T KOG1383|consen  116 PVVRKLEAECVNMIANLFNAP--SDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVE  193 (491)
T ss_pred             chhHHHHHHHHHHHHHHhcCC--ccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEE
Confidence            456778888888877766644  3333 578899999665555431    1 22   46777788888899999999999


Q ss_pred             eEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhh-cCcEEEEccCCCccccC--CCC
Q 019298          148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK-LKTLVIADEVYGHLVFG--DKP  224 (343)
Q Consensus       148 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~-~~~~~i~D~ay~~~~~~--~~~  224 (343)
                      +..+++++ .++.+|+.++.+.+++++..++...|+-|+|..   +++++|.++..+ +++.+.+|.+-++|.-.  ...
T Consensus       194 l~~V~~~~-~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~---e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~  269 (491)
T KOG1383|consen  194 LREVPLDE-GDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEI---EDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLN  269 (491)
T ss_pred             EEeeeccc-cceEecHHHHHHHhccceEEEEEEcCCCCccch---hhHHHHHHHHHHHhCCceeecccCccccccccccC
Confidence            99999977 678999999999999999999999999999999   999999999988 99999999999998752  111


Q ss_pred             CCcccccCCCCCEEE-EccCccccCCCCCcEEEEEEeCCCCCCCchHHH---HHHhhhh---ccccCcchHHHHHHHhc-
Q 019298          225 FVPMGVFGSTVPILT-LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV---ERMKKYF---DILGDPATFIQVCIMYG-  296 (343)
Q Consensus       225 ~~~~~~~~~~~~~i~-~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~---~~l~~~~---~~~~~~~~~~~~a~~~~-  296 (343)
                      ...+. +.. ..|-. .-+.+|- |+.--..||++-.+.+.+-  .++.   +-+....   .+.++-+. +|.++..+ 
T Consensus       270 ~~~fd-Fr~-p~V~Sisa~~HKY-Gl~~~G~~~vl~r~k~~~~--~q~~~~~~w~Gg~y~s~TlngSR~g-~~va~~wa~  343 (491)
T KOG1383|consen  270 EEEFD-FRV-PGVTSISADGHKY-GLAPAGSSWVLYRNKELLP--HQLFFHTDWLGGIYASPTLNGSRPG-SQVAAQWAA  343 (491)
T ss_pred             ccccc-cCC-CCceeEeecccee-eeeecCcEEEEEccccccc--ceEEEeccccCccccCcccccCCcc-cHHHHHHHH
Confidence            11111 111 12222 2234555 6755568998876643111  0110   0111111   11111111 22222122 


Q ss_pred             cchh-hHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298          297 CLST-IMQIMIHGNFLENFAGSCVPSYKLIPELINFKS  333 (343)
Q Consensus       297 ~l~~-~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~  333 (343)
                      +++- -..|.+..+++.+....+.+.+++++++.+..+
T Consensus       344 ~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gk  381 (491)
T KOG1383|consen  344 LMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGK  381 (491)
T ss_pred             HHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCC
Confidence            2221 145555778888888999999999888885433

>PRK12462 phosphoserine aminotransferase; Provisional

Probab=98.90  E-value=6.1e-07  Score=81.20  Aligned_cols=262  Identities=13%  Similarity=0.026  Sum_probs=142.8

Q ss_pred             eeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC-C-------CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC
Q 019298           37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSE-K-------FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (343)
Q Consensus        37 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g  108 (343)
                      .++|+-|=      -..|+++++++++.+-+- .       .+...+  -..++-+.+.+.+++.++.+-+.+=+++..|
T Consensus         5 ~~nF~aGP------a~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~--~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~Gg   76 (364)
T PRK12462          5 QLNFSGGP------GALPDTVLEQVRQAVVELPETGLSVLGMSHRSS--WFSSLLAQAEADLRDLLGIPDEYGVVFLQGG   76 (364)
T ss_pred             cceecCCC------cCCCHHHHHHHHHHHhcccccCccccccccccH--HHHHHHHHHHHHHHHHhCCCCCCeEEEEecc
Confidence            56777663      346788888877666431 1       222222  1233444444444444444323333455666


Q ss_pred             hHHHHHHHHHHhcCCCCeEE-EeCCCCcc--hHHHHHhcCceeEEeecCCC--CCCCCCHHHHHhhhcCCceEEEEeCCC
Q 019298          109 CTQAIDVAMALLSRPGANIL-LPRPGFPI--YELSAAFRHIEVRHFDLLPD--KGWEVDLDDIESLADQNTVALVIINPG  183 (343)
Q Consensus       109 ~~~al~~~~~~l~~~gd~vl-~~~p~~~~--~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~i~~~~p~  183 (343)
                      ++.++..+...|+.+||+++ +..-++.+  +...++.+| ++..+.....  .+..++.+.++  ++++.+.+.+|+-.
T Consensus        77 gT~~~ea~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~~--~~~d~~~v~~t~NE  153 (364)
T PRK12462         77 SSLQFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAELD--WDARAPFRHYVSNE  153 (364)
T ss_pred             HHHHHHHHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHhc--cCCCCcEEEEccCC
Confidence            99999999999999999654 44444432  233445555 4444432111  12334555552  23356677777777


Q ss_pred             CCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCC
Q 019298          184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPC  263 (343)
Q Consensus       184 nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~  263 (343)
                      ..||+.++        ++.+.++.++|+|.+-..+.    .+..+..+     .++..|..|.+|.+|  ++.++.+++.
T Consensus       154 TstGv~~~--------~~~~~~~~llvvD~sS~~~s----~pid~~~~-----dvi~agsQKnlgP~G--ltvvivs~~a  214 (364)
T PRK12462        154 TVEGLQFP--------DAAGLPDSPLIADMSSDFMS----RPFDVEAY-----GMVYAHAQKNLGPAG--VTVAIIRRAL  214 (364)
T ss_pred             CCceEecC--------cccccCCCeEEEEcCchhhC----CCCChHHc-----cEEEeeccccCCCCc--eEEEEECHHH
Confidence            79999986        22334689999999987632    22333333     277778899999887  5777776432


Q ss_pred             CCCCc---hHHHHHHhhh-hcccc-CcchHHHHHHHhccchhh-HH--HHH-HHHHHHHHHHHHHHhhcCCCCce
Q 019298          264 GMFRK---PKVVERMKKY-FDILG-DPATFIQVCIMYGCLSTI-MQ--IMI-HGNFLENFAGSCVPSYKLIPELI  329 (343)
Q Consensus       264 ~~~~~---~~~~~~l~~~-~~~~~-~~~~~~~~a~~~~~l~~~-~~--~l~-~~~~~~~~~~~~~~~L~~~~g~~  329 (343)
                      .-...   |.+.+..... ..... .++...-.++ ...|+-. .+  -++ +.++.+++.+.+++.+...+|+.
T Consensus       215 l~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l-~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~  288 (364)
T PRK12462        215 LERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVM-ALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVI  288 (364)
T ss_pred             HhhccccCCchhhHHHHHhcCCCCCCchHHHHHHH-HHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence            10000   1111110111 11122 3333433333 3332211 11  122 77888888999999998876554

>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]

Probab=98.88  E-value=1.5e-07  Score=81.11  Aligned_cols=258  Identities=18%  Similarity=0.138  Sum_probs=156.7

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF---NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  110 (343)
                      +...+||=.+.-.. +.-..+|.+.++++++.+.-.+   ..|.+.  ..++.+.+.+++        ..+.|+.++.+.
T Consensus        58 Gk~ylDflsaysaV-nqGhchpki~~aLqeq~~kLtlssrafYnd~--~~~f~~~vt~lf--------~~~kvlpmnTGa  126 (427)
T KOG1402|consen   58 GKEYLDFLSAYSAV-NQGHCHPKIIKALQEQADKLTLSSRAFYNDV--LGEFAEYVTKLF--------GYDKVLPMNTGA  126 (427)
T ss_pred             ccchhhhhhhhhhc-ccCCCCHHHHHHHHHHHhHhhhhhHHHhhhh--HHHHHHHHHHhc--------Ccceeeecccch
Confidence            55566664433111 1234789999999998874321   123332  235555565555        467888888889


Q ss_pred             HHHHHHHHHhc------C--CC--CeEEEeCCCCcchHHHHHhcCce--------------eEEeecCCCCCCCCCHHHH
Q 019298          111 QAIDVAMALLS------R--PG--ANILLPRPGFPIYELSAAFRHIE--------------VRHFDLLPDKGWEVDLDDI  166 (343)
Q Consensus       111 ~al~~~~~~l~------~--~g--d~vl~~~p~~~~~~~~~~~~g~~--------------~~~~~~~~~~~~~~d~~~l  166 (343)
                      ++.+.+++...      +  |.  ..|+...-+|++-.-.+...+.+              +..+++       =|.++|
T Consensus       127 Ea~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y-------~d~eal  199 (427)
T KOG1402|consen  127 EAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY-------GDAEAL  199 (427)
T ss_pred             hHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc-------CCHHHH
Confidence            99999987763      1  32  24444444544322111112111              111211       168999


Q ss_pred             HhhhcCCceEEEEeCC-CCCcccccCH-HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCc
Q 019298          167 ESLADQNTVALVIINP-GNPCGNVYSY-QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS  244 (343)
Q Consensus       167 ~~~~~~~~~~i~~~~p-~nptG~~~~~-~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~s  244 (343)
                      +.++++...+.++..| +.-.|++.|. ..+++..++|++||+++|.||++.++...|+-. . -.+..-...+++  |.
T Consensus       200 e~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~l-a-~d~env~PDivi--lg  275 (427)
T KOG1402|consen  200 EVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLL-A-CDYENVRPDIVI--LG  275 (427)
T ss_pred             HHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEE-E-eehhhcCCCeEE--Ee
Confidence            9999886666677777 7888888654 689999999999999999999999987766521 1 111111122444  57


Q ss_pred             cccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHH--HHHHHHHHHHHHHHh
Q 019298          245 KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLENFAGSCVPS  321 (343)
Q Consensus       245 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~~~~~~~~~~  321 (343)
                      |+++..=..+..+++++        ++.-.++-.. ..++..++++.+++ .++|.   -..+  +.++-+..-+.++..
T Consensus       276 KalSGG~~Pvsavl~~~--------~im~~~~pgeHgsTyggNpLg~~va-iAale---vi~eekL~era~~lG~~l~~~  343 (427)
T KOG1402|consen  276 KALSGGVYPVSAVLADD--------DIMLNIKPGEHGSTYGGNPLGCAVA-IAALE---VIVEEKLVERAAKLGEILRDQ  343 (427)
T ss_pred             ccccCCeeeeEEEEecH--------HHHhccCCCccccccCCChHHHHHH-HHHHH---HHHHHHHHHHHHHHHHHHHHH
Confidence            99766668888888854        4555444332 23556777777666 34432   1222  666666666777777


Q ss_pred             hcCC
Q 019298          322 YKLI  325 (343)
Q Consensus       322 L~~~  325 (343)
                      |+++
T Consensus       344 L~~l  347 (427)
T KOG1402|consen  344 LNKL  347 (427)
T ss_pred             HHhc
Confidence            7665

>PRK12566 glycine dehydrogenase; Provisional

Probab=98.86  E-value=6.4e-08  Score=95.99  Aligned_cols=175  Identities=16%  Similarity=0.157  Sum_probs=115.0

Q ss_pred             CCCCC---CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh----cC---C-CCeEEEeCCCCcchHH
Q 019298           71 NGYAP---TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL----SR---P-GANILLPRPGFPIYEL  139 (343)
Q Consensus        71 ~~Y~~---~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l----~~---~-gd~vl~~~p~~~~~~~  139 (343)
                      +-|.|   .+|..++...+.+++.+..|....  .+...+|++ +-...+.++    ..   + .++|+++.-.|+....
T Consensus       530 hPyqp~e~sQG~lq~i~elq~~l~eLtGmd~~--Sl~p~sGA~-gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpa  606 (954)
T PRK12566        530 HPFAPREQAEGYRAMIDELEAWLCAITGFDAI--CMQPNSGAQ-GEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPA  606 (954)
T ss_pred             CCCCchhhhcCHHHHHHHHHHHHHHHHCCCeE--eecCCchHH-HHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHH
Confidence            45666   567777777777777665543222  334444443 332333332    22   2 3678899988877667


Q ss_pred             HHHhcCceeEEeecCCCCCCCCCHHHHHhhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCC
Q 019298          140 SAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG  216 (343)
Q Consensus       140 ~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~  216 (343)
                      .+...|.+++.++.+.  +..+|+++|++.++   ++..+|.+.+|++-.+..   +++++|+++|+++|.++++|.++.
T Consensus       607 sa~~~GieVv~Vp~D~--~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e---~~V~eI~~iah~~Galv~vDgA~~  681 (954)
T PRK12566        607 SAQMAGMRVVIVECDP--DGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYE---EGIREICEVVHQHGGQVYMDGANL  681 (954)
T ss_pred             HHHHCCCEEEEeccCC--CCCcCHHHHHHHhhccCCCEEEEEEEecCcCceec---chHHHHHHHHHHcCCEEEEEeeCh
Confidence            7888999999998863  34799999999987   456666777777666554   679999999999999999999986


Q ss_pred             ccccCCCCCCcccccCCCCCEEEEccCccccCC----CCCcEEEEEE
Q 019298          217 HLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV----PGWRLGWFVT  259 (343)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~----~G~r~G~i~~  259 (343)
                      ....   .......+   +-.++.++++|+|+.    .|.-+|.+.+
T Consensus       682 ~a~~---~l~~Pg~~---GADi~~~s~HKtf~~P~G~GGP~vG~iav  722 (954)
T PRK12566        682 NAQV---GLARPADI---GADVSHMNLHKTFCIPHGGGGPGMGPIGV  722 (954)
T ss_pred             hhcc---CCCChhhc---CCCEEEecCCcccCcCccCCCCccchhhh
Confidence            3111   11111222   334999999999863    3444666554

>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor

Probab=98.80  E-value=1.1e-08  Score=90.81  Aligned_cols=252  Identities=20%  Similarity=0.121  Sum_probs=53.8

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHH-HHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEe
Q 019298           52 HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRR-AIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP  130 (343)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~-~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~  130 (343)
                      +.++++.+++.+....-...+|.-..|...-|. .+.+++.+    -...+..+++++...|+.+++.++. +|..|++.
T Consensus        17 ~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~----ltgAeaA~VvNnnaAAv~L~l~~la-~~~EvIvs   91 (367)
T PF03841_consen   17 PLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCE----LTGAEAALVVNNNAAAVLLALNTLA-KGKEVIVS   91 (367)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccc----ccccccccccccccccccccccccc-cccccccc
Confidence            456777777776654322223432222222221 12222211    1256777888888888888888876 45566665


Q ss_pred             CCCCcc------hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCc--ccccCHHHHHHHHHHH
Q 019298          131 RPGFPI------YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC--GNVYSYQHLQKLAETA  202 (343)
Q Consensus       131 ~p~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~npt--G~~~~~~~l~~l~~~~  202 (343)
                      .-.-..      ........|.+.+.+....    .-.++++++++++++.+++-.+++|-.  |..-. -.++++++++
T Consensus        92 RGelVeiGgsFRip~vm~~sGa~lvEVGttN----~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~-~~~~el~~la  166 (367)
T PF03841_consen   92 RGELVEIGGSFRIPDVMRQSGARLVEVGTTN----RTHLSDYEKAITENTAALLKVHTSNFRIQGFTGE-VSLEELAELA  166 (367)
T ss_dssp             --------------------------------------------------------------------------HHHHHH
T ss_pred             ccccccccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccc-ccHHHHHHHH
Confidence            433221      3455666788888776431    245788899999999999888887753  33322 2688999999


Q ss_pred             hhcCcEEEEccCCCccc----cCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh
Q 019298          203 NKLKTLVIADEVYGHLV----FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY  278 (343)
Q Consensus       203 ~~~~~~~i~D~ay~~~~----~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~  278 (343)
                      ++|++++++|..-+.+.    ++-...+.+..+-..+-.++++|-.|.+|.|-  .|.+++.        .++++++++.
T Consensus       167 ~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ--aGiI~Gk--------k~lI~~lk~~  236 (367)
T PF03841_consen  167 KEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ--AGIIVGK--------KELIEKLKKH  236 (367)
T ss_dssp             HHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S---EEEEEE--------HHHHHHHHHH
T ss_pred             hhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCC--eEEEEeC--------HHHHHHHhhC
Confidence            99999999999885542    11112233444444455699999999976554  7999885        5899999865


Q ss_pred             h-ccccCcchHHHHHHHhccchhhH---HHHH----------HHHHHHHHHHHHHHhhcC
Q 019298          279 F-DILGDPATFIQVCIMYGCLSTIM---QIMI----------HGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       279 ~-~~~~~~~~~~~~a~~~~~l~~~~---~~l~----------~~~~~~~~~~~~~~~L~~  324 (343)
                      . .....+.....+++ .+.|....   +-.+          ..+.++++.+.+.+.|..
T Consensus       237 pl~RalrvdK~tla~L-~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~  295 (367)
T PF03841_consen  237 PLGRALRVDKLTLAAL-EATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKA  295 (367)
T ss_dssp             HHTTT-B--HHHHHHH-HHHHHH-------------------------------------
T ss_pred             CCcceEeeCHHHHHHH-HHHHHHHHHhhcccccccccccccccccccccccccccccccc
Confidence            2 22456777777666 44443211   1111          445555666666666655

3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.

>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]

Probab=98.76  E-value=3.5e-07  Score=81.85  Aligned_cols=177  Identities=19%  Similarity=0.158  Sum_probs=121.2

Q ss_pred             CCCCCC---CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHH--HHHh-cCC----CCeEEEeCCCCcchHH
Q 019298           70 FNGYAP---TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA--MALL-SRP----GANILLPRPGFPIYEL  139 (343)
Q Consensus        70 ~~~Y~~---~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~--~~~l-~~~----gd~vl~~~p~~~~~~~  139 (343)
                      .+-|.|   .+|..++...+.+|+.+.-|  .+.-.+...+|++.-..-+  ++.. ...    .++|++|+..|++...
T Consensus        95 iHP~~pe~~vqG~l~li~~Lq~~L~~ITG--~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPA  172 (496)
T COG1003          95 IHPFQPEEQVQGYLELIYELQEWLKEITG--MDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPA  172 (496)
T ss_pred             cCCCCChHHHHHHHHHHHHHHHHHHHhcC--CceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChh
Confidence            445555   35777888888899976433  2222333455554433322  2222 223    3789999999999999


Q ss_pred             HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298          140 SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV  219 (343)
Q Consensus       140 ~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~  219 (343)
                      ++.+.|.+++.++.+.  +..+|+++|++.+.++..++.+++||.- |..  .+.+++|+++..++|..+..|.|-..-.
T Consensus       173 SAam~G~~VV~V~~~~--~G~VDlddLk~k~~~~~AalMiTnPsT~-GvF--E~~I~ei~~ivH~~Gg~vY~DGANlNA~  247 (496)
T COG1003         173 SAAMAGFKVVVVKCDE--NGNVDLDDLRAKAEDNLAALMITNPSTL-GVF--EEDIREICEIVHEAGGQVYYDGANLNAI  247 (496)
T ss_pred             hHhhcCceEEEEecCC--CCCccHHHHHHHhccceeEEEeccCccc-ccc--hhhHHHHHHHHHHcCCEEEecCcchhhh
Confidence            9999999999998874  4469999999999989999999998753 433  2789999999999999999998865433


Q ss_pred             cCCCCCCcccccCCCCCEEEEccCccccCC----CCCcEEEEEE
Q 019298          220 FGDKPFVPMGVFGSTVPILTLGSLSKRWIV----PGWRLGWFVT  259 (343)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~----~G~r~G~i~~  259 (343)
                      .+-..+..+      +-.++=.-++|+|..    .|...|=|.+
T Consensus       248 vG~~rPGd~------G~DV~HlNLHKTF~iPHGGGGPG~GPvgV  285 (496)
T COG1003         248 VGLARPGDM------GFDVVHLNLHKTFCIPHGGGGPGAGPVGV  285 (496)
T ss_pred             hcccccccc------ccceEEeecccccccCCCCCCCCCCceeh
Confidence            332222221      222555678888855    3454555444

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=98.65  E-value=7e-06  Score=83.17  Aligned_cols=181  Identities=15%  Similarity=0.091  Sum_probs=115.8

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCC-----C----CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAPTA-----G----LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS  121 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~-----g----~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~  121 (343)
                      ...|+.+.+++.+...  ....|+|.+     |    .-+++..+++++      +++++++.++.+++.+.+.++.++.
T Consensus       115 ~~~P~~v~~~i~~~~~--~~TaytPYqaEisQG~lqal~~~Qt~ia~Lt------G~~~anaSL~d~aTAaaea~~~a~~  186 (993)
T PLN02414        115 THVPPVILRNILENPG--WYTQYTPYQAEIAQGRLESLLNYQTMITDLT------GLPMSNASLLDEGTAAAEAMAMCNN  186 (993)
T ss_pred             ccCCHHHHHHHHhChH--HHhhcCCCchHHHHHHHHHHHHHHHHHHHHh------CCChhhEeecCChHHHHHHHHHHHh
Confidence            3466777676655432  233565543     2    235777788887      6789999999999999998877762


Q ss_pred             -CC--CCeEEEeCCCCcchHHHH----HhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298          122 -RP--GANILLPRPGFPIYELSA----AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (343)
Q Consensus       122 -~~--gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~  194 (343)
                       .+  +++|++++-.|+.+...+    +..|.+++.++....     +      ...+....++ .+-.|.+|.+   .+
T Consensus       187 ~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~-----~------~~~~~v~~vl-vq~P~~~G~v---~d  251 (993)
T PLN02414        187 ILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF-----D------YSSGDVCGVL-VQYPATDGEV---LD  251 (993)
T ss_pred             cccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh-----c------cccCceEEEE-EecCCCCeEE---cC
Confidence             43  478999999998876554    345888887765321     1      1111222333 3334569999   56


Q ss_pred             HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCcccc---CCCCCcEEEEEEeC
Q 019298          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW---IVPGWRLGWFVTTD  261 (343)
Q Consensus       195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~---~~~G~r~G~i~~~~  261 (343)
                      +++|+++|+++|+++++ .+... ....  ..+...+   +-.|++++..|..   |..|.+.|++.+.+
T Consensus       252 v~~I~~~ah~~GaL~iV-aad~l-al~~--l~~pge~---GADi~vgsgqKwg~P~G~GGP~aGflavr~  314 (993)
T PLN02414        252 YAEFVKNAHANGVKVVM-ATDLL-ALTM--LKPPGEW---GADIVVGSAQRFGVPMGYGGPHAAFLATSQ  314 (993)
T ss_pred             HHHHHHHHHHcCCEEEE-EECHH-HhcC--CCCHhhc---cCcEEEECCCccccCCCCCCCCeeEEEECH
Confidence            88999999999999999 33322 1111  1112222   3348899988884   12556689988864

>PRK05367 glycine dehydrogenase; Provisional

Probab=98.64  E-value=3.4e-06  Score=85.61  Aligned_cols=176  Identities=18%  Similarity=0.168  Sum_probs=117.4

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCC-----CC----HHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc-C
Q 019298           53 TTHVATEAVAEALLSEKFNGYAPTA-----GL----PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-R  122 (343)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~Y~~~~-----g~----~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~  122 (343)
                      .|+.+.+.+.+-  ...+..|.|.+     |.    -++++.++++.      ++++.++.+..+++.+.+.++.++. .
T Consensus        90 ~P~vi~~~i~~~--~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~Lt------G~~~anaSl~d~aTAa~ea~~~a~~~~  161 (954)
T PRK05367         90 TPPVILRNILEN--PAWYTAYTPYQPEISQGRLEALLNFQTMVADLT------GLEIANASLLDEATAAAEAMALAKRVS  161 (954)
T ss_pred             CcHHHHHHHHhC--cchhhccCCCChHHHHHHHHHHHHHHHHHHHHH------CCChhhccccccHHHHHHHHHHhhhhc
Confidence            445554544331  12355677753     21    24666777776      6788999999999999998887763 3


Q ss_pred             C--CCeEEEeCCCCcchHHH----HHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHH
Q 019298          123 P--GANILLPRPGFPIYELS----AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQ  196 (343)
Q Consensus       123 ~--gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~  196 (343)
                      +  +++|++++-.|+.+...    ++..|.+++.++...  +  ++        .+++..+++.+ .|.+|.+   ++++
T Consensus       162 ~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~--d--~~--------~~~~~~vlvq~-p~~~G~i---~d~~  225 (954)
T PRK05367        162 KSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK--A--LD--------HDDVFGVLLQY-PGTSGEV---RDYT  225 (954)
T ss_pred             cCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc--C--CC--------cccEEEEEEec-CCCCeee---ccHH
Confidence            4  48999999999887654    455788988887532  1  11        12343444445 4789999   5689


Q ss_pred             HHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccc-----cCCCCCcEEEEEEeC
Q 019298          197 KLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKR-----WIVPGWRLGWFVTTD  261 (343)
Q Consensus       197 ~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-----~~~~G~r~G~i~~~~  261 (343)
                      +|+++|+++|+++++|.....+....    +...+   +-.|+++|..|.     ||.||  .|++.+.+
T Consensus       226 ~i~~~ah~~Gal~~vda~~~Al~~l~----~pge~---GaDi~vgs~qkfg~P~g~GGP~--aGflavr~  286 (954)
T PRK05367        226 ALIAAAHARGALVAVAADLLALTLLT----PPGEM---GADIAVGSAQRFGVPMGFGGPH--AAYFAVRD  286 (954)
T ss_pred             HHHHHHHHcCCEEEEEehhhhccCCC----Chhhc---CCCEEEeeCcccCCCCCCCCCC--EEEEEECH
Confidence            99999999999999987553322111    12222   334999999997     66665  89888854

>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]

Probab=98.58  E-value=8.8e-06  Score=71.31  Aligned_cols=251  Identities=14%  Similarity=0.096  Sum_probs=150.9

Q ss_pred             CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC-----CCCeEEEeCCCC-cchHHHHHhcC
Q 019298           72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR-----PGANILLPRPGF-PIYELSAAFRH  145 (343)
Q Consensus        72 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~-----~gd~vl~~~p~~-~~~~~~~~~~g  145 (343)
                      .|.-+.+.-.|.+++.+.+        .-+.++.|.-+..|=+.++..+.+     ||.+..+++..| .+...-.+..|
T Consensus        74 AYagsrs~~~L~~avkdif--------Gfq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng  145 (471)
T COG3033          74 AYAGSRSYYALADAVKDIF--------GFQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQING  145 (471)
T ss_pred             hhcccccHHHHHHHHHHhc--------CceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcC
Confidence            5777788889999999988        247788887777777766666654     455555555555 44455566677


Q ss_pred             ceeEEeecCCCC--------CCCCCHHHHHhhhcC----CceEEEEe-CCCCCcccccCHHHHHHHHHHHhhcCcEEEEc
Q 019298          146 IEVRHFDLLPDK--------GWEVDLDDIESLADQ----NTVALVII-NPGNPCGNVYSYQHLQKLAETANKLKTLVIAD  212 (343)
Q Consensus       146 ~~~~~~~~~~~~--------~~~~d~~~l~~~~~~----~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D  212 (343)
                      ...+.+.++.-.        ...+|++.|++.+.+    +...|++. +.|...|+..|.+.+++..++|++|++.++.|
T Consensus       146 ~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~D  225 (471)
T COG3033         146 ATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMD  225 (471)
T ss_pred             CccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEee
Confidence            777666544321        245799999998865    34555544 44668999999999999999999999999999


Q ss_pred             cCCC-ccccC---C-CC--CCcccccCC--C-CCEEEEccCccccCCCCCcE-EEEEEeCCCCCCCchHHHHHHhhhh--
Q 019298          213 EVYG-HLVFG---D-KP--FVPMGVFGS--T-VPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYF--  279 (343)
Q Consensus       213 ~ay~-~~~~~---~-~~--~~~~~~~~~--~-~~~i~~~S~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~l~~~~--  279 (343)
                      .+-. +..|-   . +.  ..++.....  . --.-+..|.-|. ++.-  + |++...++. ..   ++-..++...  
T Consensus       226 a~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD-~lvn--mGGfl~~~D~~-~f---Dvy~~~~~~~V~  298 (471)
T COG3033         226 AARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKD-GLVN--MGGFLCFKDDS-FF---DVYEECRTLVVV  298 (471)
T ss_pred             hhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeecccc-ceec--cccEEEecCcc-HH---HHHHHHHhheEe
Confidence            7643 22211   0 11  111111000  0 012566788888 5533  3 455554432 11   3455555441  


Q ss_pred             ----ccccCcchHHHHHHHhccchhh--HHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298          280 ----DILGDPATFIQVCIMYGCLSTI--MQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD  342 (343)
Q Consensus       280 ----~~~~~~~~~~~~a~~~~~l~~~--~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~  342 (343)
                          ..+++.+.-...++ ..-|.+.  ..|+.  .++ +..+++.+.|.+. |+++..|.||.-+|++
T Consensus       299 ~eG~~tYGgl~Grdmeal-AvGL~e~~~~~yl~--~Rv-~Qv~YL~~~l~~~-GVpi~~paGGHavfvd  362 (471)
T COG3033         299 QEGFPTYGGLAGRDMEAL-AVGLREGVNFDYLA--HRV-AQVQYLADGLEEA-GVPIVQPAGGHAVFVD  362 (471)
T ss_pred             eccccccCcccchhHHHH-HHHHHHhcCcHHHH--HHH-HHHHHHHHHHHhc-CCeeEecCCCceEEee
Confidence                12233333333343 2222221  22222  222 3345667777777 8998899999998886

>COG3844 Kynureninase [Amino acid transport and metabolism]

Probab=98.50  E-value=1.9e-05  Score=68.43  Aligned_cols=146  Identities=16%  Similarity=0.117  Sum_probs=102.8

Q ss_pred             CCCCCcEEEecChHHHHHHHHHHhcC--CCCeEEEeCCCCcc-----hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhh
Q 019298           97 KLTPNDVFVTSGCTQAIDVAMALLSR--PGANILLPRPGFPI-----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL  169 (343)
Q Consensus        97 ~~~~~~i~~~~g~~~al~~~~~~l~~--~gd~vl~~~p~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~  169 (343)
                      +..+.+++++.+++-.++.++.+..+  +|+.|++++-.-.+     .+..+...+...   .    -...+.+++++++
T Consensus        90 GA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~---~----~~~~~~P~~~~~~  162 (407)
T COG3844          90 GARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIGY---D----LEGVIAPRALEEA  162 (407)
T ss_pred             cCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhcccc---c----ceeeeChHHHHHh
Confidence            56889999999999888888877653  58888887654432     233444443321   1    1123467799999


Q ss_pred             hcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCC
Q 019298          170 ADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV  249 (343)
Q Consensus       170 ~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~  249 (343)
                      +.+++.++++++.+.-||+.+   ++.+|-+++++++++++.|-+|+...    -+..   +...+-.+.|++..|-+..
T Consensus       163 ~~dd~AvV~L~~V~y~TGql~---dm~aiT~~AH~~galv~wDLAHsaGa----vp~~---Lh~~gaDfaigcsyKYLNg  232 (407)
T COG3844         163 ITDDVAVVLLSHVNYKTGQLL---DMRAITALAHQHGALVGWDLAHSAGA----VPVD---LHAAGADFAIGCSYKYLNG  232 (407)
T ss_pred             hccceEEEEecccccccccee---eHHHHHHHHHhcCceEEeehhcccCC----ccee---ecccCCCeeeeeeceeccC
Confidence            999999999999999999996   46777888889999999999998632    1122   3333445899999998765


Q ss_pred             -CCCcEEEEEE
Q 019298          250 -PGWRLGWFVT  259 (343)
Q Consensus       250 -~G~r~G~i~~  259 (343)
                       ||-..|.-+.
T Consensus       233 GPGapa~l~v~  243 (407)
T COG3844         233 GPGAPAGLFVA  243 (407)
T ss_pred             CCCCceeEEec
Confidence             6655444443

>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=98.48  E-value=6.2e-05  Score=66.25  Aligned_cols=276  Identities=14%  Similarity=0.110  Sum_probs=151.4

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHHhhh--CCCCCCCC----cEEEecChHHHHHHHHHHhcCC
Q 019298           52 HTTHVATEAVAEALLSEKFNGYAPT--AGLPLTRRAIAEYLSRD--LPYKLTPN----DVFVTSGCTQAIDVAMALLSRP  123 (343)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~~~~~--~~~~~~~~----~i~~~~g~~~al~~~~~~l~~~  123 (343)
                      -...++.+++-..+.+.-..+|+-.  .|-.++...+--+..++  --++++|+    +|.. -+++.|...+..++++|
T Consensus        51 Fts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp-~SGSPANfavYtall~P  129 (477)
T KOG2467|consen   51 FTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQP-YSGSPANFAVYTALLKP  129 (477)
T ss_pred             chHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeecc-CCCCchhhHHHhhhcCC
Confidence            3678899999888876555556542  23345554443333221  01234554    3333 44577788888899999


Q ss_pred             CCeEEE-eCCCCcchHHHHHhcC----ceeE-----EeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCH
Q 019298          124 GANILL-PRPGFPIYELSAAFRH----IEVR-----HFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       124 gd~vl~-~~p~~~~~~~~~~~~g----~~~~-----~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~  192 (343)
                      ++++.- .-|.=+...+....-+    +.-+     ++.+++. ..-+|.|.||+.... +|++|+. ..+ .....+  
T Consensus       130 h~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~-TG~IDYD~Le~~A~~frPk~iia-G~S-aY~R~~--  204 (477)
T KOG2467|consen  130 HERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPS-TGYIDYDKLEKTATLFRPKLIIA-GTS-AYSRLI--  204 (477)
T ss_pred             CCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCC-CCceehHHHHHHHHhcCCcEEEe-ccc-cchhhc--
Confidence            988762 2232221212111111    1111     2233443 345899999986655 5665553 222 122233  


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCc-cccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCC---c
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR---K  268 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~---~  268 (343)
                       +..++.++|.+.|.+++.|.+|.. ++-.+.-+.++...     .|+..+.+|+  +.|.|.|.|.-........   .
T Consensus       205 -DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~-----DiVTTTTHKs--LRGPRg~mIFyRkGvk~~~~k~g  276 (477)
T KOG2467|consen  205 -DYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYC-----DIVTTTTHKS--LRGPRGAMIFYRKGVKSIKPKQG  276 (477)
T ss_pred             -cHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCccccc-----ceeecccccc--ccCCcceeEEEeccCCcCCCCCC
Confidence             345566666688999999999984 34333333343322     2899999999  7899999887643211110   0


Q ss_pred             h----HHHHHHhhh-hc-cccCcchHHHHHHHhccchh--hHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCCCCceEe
Q 019298          269 P----KVVERMKKY-FD-ILGDPATFIQVCIMYGCLST--IMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKSTGSSLK  339 (343)
Q Consensus       269 ~----~~~~~l~~~-~~-~~~~~~~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~~~g~~~  339 (343)
                      .    ++-+++... .. .-+++.-..-.++ ..+|..  ..++-+..+++.++...+.+.|.+. |+. +........+
T Consensus       277 ~~i~ydlE~kINfaVFP~lQGGPHNhtIaal-AvALkQa~tpefk~Yq~qV~~Nakala~~l~~~-Gy~lvtgGTDnHlv  354 (477)
T KOG2467|consen  277 KEILYDLEDKINFAVFPGLQGGPHNHTIAAL-AVALKQAMTPEFKEYQKQVLKNAKALASALISR-GYKLVTGGTDNHLV  354 (477)
T ss_pred             CcceechhhhhhhhccccccCCCCcchHHHH-HHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc-CceEecCCccceEE
Confidence            0    122222211 11 1122222222333 223332  2666678888999999999999888 777 4444455555


Q ss_pred             eecC
Q 019298          340 YLDL  343 (343)
Q Consensus       340 ~~~l  343 (343)
                      .+||
T Consensus       355 LvDL  358 (477)
T KOG2467|consen  355 LVDL  358 (477)
T ss_pred             EEec
Confidence            5543

>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)

Probab=98.33  E-value=1.5e-05  Score=71.55  Aligned_cols=168  Identities=13%  Similarity=0.143  Sum_probs=101.2

Q ss_pred             CcEEEecChHH-HHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCC-CCCCCCHHHHHhhhcC---C
Q 019298          101 NDVFVTSGCTQ-AIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD-KGWEVDLDDIESLADQ---N  173 (343)
Q Consensus       101 ~~i~~~~g~~~-al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~~~~---~  173 (343)
                      ...++++.++. .+.+.+.++.  ..++.|+.+.-.+.+...++..+|++++.++...+ +....|.+.+++.+++   .
T Consensus        75 ~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~  154 (389)
T PF05889_consen   75 KSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAKIEELGAD  154 (389)
T ss_dssp             CEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGG
T ss_pred             cceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCC
Confidence            45666666543 3444444453  45789999998888888899999999998885433 3334567778877753   4


Q ss_pred             ceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCC-EEEEccCccccCCCCC
Q 019298          174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRWIVPGW  252 (343)
Q Consensus       174 ~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~-~i~~~S~sK~~~~~G~  252 (343)
                      ..+.++++++.-.+...  +++++|+++|+++|+..|+..||+.-...  -...+......++ .+++.|+-|.|..|- 
T Consensus       155 ~iLcvltttscfapr~~--D~i~~IakiC~~~~IPhlvNnAYgvQ~~~--~~~~i~~a~~~GRvda~vqS~dkNF~VPv-  229 (389)
T PF05889_consen  155 NILCVLTTTSCFAPRLP--DDIEEIAKICKEYDIPHLVNNAYGVQSSK--CMHLIQQAWRVGRVDAFVQSTDKNFMVPV-  229 (389)
T ss_dssp             GEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTTT-HH--HHHHHHHHHHHSTCSEEEEEHHHHHCEES-
T ss_pred             CeEEEEEecCccCCCCC--ccHHHHHHHHHHcCCceEEccchhhhHHH--HHHHHHHHHhcCCcceeeeecCCCEEecC-
Confidence            56667777765455542  46999999999999999999999862100  0000111111122 278999999986642 


Q ss_pred             cEEEEEEeCCCCCCCchHHHHHHhhhhc
Q 019298          253 RLGWFVTTDPCGMFRKPKVVERMKKYFD  280 (343)
Q Consensus       253 r~G~i~~~~~~~~~~~~~~~~~l~~~~~  280 (343)
                      . |-++++.      ++..+..+.+...
T Consensus       230 G-gai~As~------~~~~i~~vs~~Yp  250 (389)
T PF05889_consen  230 G-GAIMASF------DPSGILAVSKEYP  250 (389)
T ss_dssp             S-HEEEEES------SHHHHHHHHHTSH
T ss_pred             C-CcEEEec------CHHHHHHHHHHhh
Confidence            2 3444443      4678888877653

Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=98.29  E-value=0.00024  Score=71.50  Aligned_cols=140  Identities=15%  Similarity=0.173  Sum_probs=92.9

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCC-----CC----HHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAPTA-----GL----PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS  121 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~-----g~----~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~  121 (343)
                      .-.|+.+.+.+.+-  ...+..|.|.+     |.    -++.+.++++.      +.+..|.-+..+++.+.+.++.+..
T Consensus        76 ~~~p~~i~r~v~~~--p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLt------Gm~~aNaSl~d~atA~aEa~~~a~~  147 (939)
T TIGR00461        76 TILPPVIQRNLLEN--PGWYTAYTPYQPEISQGRLEALLNFQTVVSDLT------GLPVANASLLDEGTAAAEAMALSFN  147 (939)
T ss_pred             CcCChHHHHHHHhC--chhhhcCCCCChhhhhHHHHHHHHHHHHHHHHH------CCChhhhhccchhhHHHHHHHHHHH
Confidence            34567776554431  22345677643     21    13555566666      5677787888888887776665542


Q ss_pred             ---CCCCeEEEeCCCCcchHHHHH----hcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298          122 ---RPGANILLPRPGFPIYELSAA----FRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (343)
Q Consensus       122 ---~~gd~vl~~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~  194 (343)
                         +++++|++++-.|+.+....+    ..|.+++.+          |.++|++.+  ++..+++.+|+ -.|.+   ++
T Consensus       148 ~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~----------~~~~l~~~~--~~~~v~~q~Pn-~~G~i---ed  211 (939)
T TIGR00461       148 VSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVV----------DCSDIKKAV--DVFGCLLQYPA-TDGSI---LD  211 (939)
T ss_pred             hhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEE----------cHHHHhhcC--CEEEEEEECCC-CCeEE---ec
Confidence               234799999999988775444    667777765          345566554  35555666665 58888   68


Q ss_pred             HHHHHHHHhhcCcEEEEccC
Q 019298          195 LQKLAETANKLKTLVIADEV  214 (343)
Q Consensus       195 l~~l~~~~~~~~~~~i~D~a  214 (343)
                      +++|+++++++|.+++++.-
T Consensus       212 ~~~i~~~~h~~gal~~~~ad  231 (939)
T TIGR00461       212 YKQLIDALHSHKSLVSVAAD  231 (939)
T ss_pred             HHHHHHHHHHcCCEEEEEec
Confidence            99999999999999998543

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1

Probab=98.11  E-value=0.0004  Score=64.01  Aligned_cols=222  Identities=19%  Similarity=0.216  Sum_probs=114.2

Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh---cCCCCeEEEeCCCCcchHHHHH----hcCceeEEeec
Q 019298           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL---SRPGANILLPRPGFPIYELSAA----FRHIEVRHFDL  153 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l---~~~gd~vl~~~p~~~~~~~~~~----~~g~~~~~~~~  153 (343)
                      ++...++++.      +.+.-+.-+-.|++.+-+.++.+.   .+.+++|+++.-.|+.+....+    ..|.+++.++.
T Consensus       114 e~Qs~i~eLT------GmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~  187 (429)
T PF02347_consen  114 EYQSMICELT------GMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPL  187 (429)
T ss_dssp             HHHHHHHHHH------TSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-B
T ss_pred             HHHHHHHHhh------CCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecc
Confidence            3445555555      334334455566666555554443   3344699999999999877444    35788888776


Q ss_pred             CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (343)
Q Consensus       154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~  233 (343)
                      +...  ..|        ++++.++++.+||. .|.+   +++++|+++++++|.++++ .+- ......-  .+...++.
T Consensus       188 ~~~~--~~d--------~~~~a~v~vq~Pn~-~G~~---ed~~~i~~~~h~~gal~~~-~ad-~~aL~~l--~~Pge~GA  249 (429)
T PF02347_consen  188 DEDG--TTD--------DDDTAAVMVQNPNT-FGVF---EDIKEIADIAHAAGALVIV-GAD-PNALGGL--KSPGEYGA  249 (429)
T ss_dssp             BTTC--SB---------STTEEEEEEESS-T-TSB-----THHHHHHHHHHTT-EEEE-CGG-CCGCCTC----GGGGT-
T ss_pred             cccC--Ccc--------ccCeEEEEeecCCC-CceE---eeHHHHHHHHHHcCCEEEE-ecC-HHHHhCc--CChhhcCc
Confidence            5432  223        55788889999985 7888   7799999999999999887 332 2222211  11222332


Q ss_pred             CCCEEEEccCccccCC----CCCcEEEEEEeCCC----------------CCC------Cc-hHHHHHHhhhhccccCcc
Q 019298          234 TVPILTLGSLSKRWIV----PGWRLGWFVTTDPC----------------GMF------RK-PKVVERMKKYFDILGDPA  286 (343)
Q Consensus       234 ~~~~i~~~S~sK~~~~----~G~r~G~i~~~~~~----------------~~~------~~-~~~~~~l~~~~~~~~~~~  286 (343)
                         .|++++ +|.||.    .|...|++.+.+.-                +..      +. .+.|++-+...++..+..
T Consensus       250 ---DI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqa  325 (429)
T PF02347_consen  250 ---DIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQA  325 (429)
T ss_dssp             ---SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-H
T ss_pred             ---cEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHH
Confidence               377776 888765    35667887775421                000      00 012222111111111111


Q ss_pred             hHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298          287 TFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN  330 (343)
Q Consensus       287 ~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~  330 (343)
                      -.+..+..+.++--+.-+.+..++...+..++.+.|.++.++.+
T Consensus       326 L~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~  369 (429)
T PF02347_consen  326 LLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPF  369 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECS
T ss_pred             HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence            11222222333333344444888888999999999998634433

4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.

>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]

Probab=98.00  E-value=0.00054  Score=62.29  Aligned_cols=143  Identities=11%  Similarity=0.170  Sum_probs=97.4

Q ss_pred             CCCCCCCHHHHHHHHHHHhhhCCCC-------C-CCCcEEEecChHHHHHHHHHHh-------cCCC------------C
Q 019298           73 YAPTAGLPLTRRAIAEYLSRDLPYK-------L-TPNDVFVTSGCTQAIDVAMALL-------SRPG------------A  125 (343)
Q Consensus        73 Y~~~~g~~~lr~~ia~~~~~~~~~~-------~-~~~~i~~~~g~~~al~~~~~~l-------~~~g------------d  125 (343)
                      +...+...+|+.-+-+|+.+..+.+       . +...|+..+. +++...++.+.       .+.+            -
T Consensus       105 W~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~ta-ses~lvallaaR~~~i~~~k~~~p~~~e~~~~~~l  183 (511)
T KOG0628|consen  105 WASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTA-SESVLVALLAARTEKIEEIKSRPPELHESSVLARL  183 (511)
T ss_pred             eecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCc-chhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhh
Confidence            3344567899999999998866543       1 2224444444 44444443332       1111            2


Q ss_pred             eEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCC-----ceEEEEeCCCCCcccccCHHHHHHHHH
Q 019298          126 NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN-----TVALVIINPGNPCGNVYSYQHLQKLAE  200 (343)
Q Consensus       126 ~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~-----~~~i~~~~p~nptG~~~~~~~l~~l~~  200 (343)
                      .+.+.+-++.+....+...|.+.+.++.+.  +++++.+.|++++.++     ++.+++.+- .-||.+ ..+++.+|..
T Consensus       184 V~Y~SDqahssveka~~i~~VklR~l~td~--n~~mr~~~L~~AIe~D~arGlIPf~v~at~-GTT~~c-a~D~l~elg~  259 (511)
T KOG0628|consen  184 VAYCSDQAHSSVEKACLIAGVKLRALPTDE--NFGMRGDTLRKAIEEDIARGLIPFFVCATL-GTTSSC-AFDELEELGP  259 (511)
T ss_pred             eEEecCcccchHHHhHhhcceeEEEeeccc--CcCCCHHHHHHHHHHHHhCCCccEEEEEee-cCcccc-ccccHHHhcc
Confidence            567888999999999999999998888764  8899999999998652     233333332 222222 3378999999


Q ss_pred             HHhhcCcEEEEccCCCcccc
Q 019298          201 TANKLKTLVIADEVYGHLVF  220 (343)
Q Consensus       201 ~~~~~~~~~i~D~ay~~~~~  220 (343)
                      +|+++++|+.+|.+|++..+
T Consensus       260 Vc~~~glWLHVDAAYAGsa~  279 (511)
T KOG0628|consen  260 VCREEGLWLHVDAAYAGSAF  279 (511)
T ss_pred             hhhhcCEEEEeehhhccccc
Confidence            99999999999999997544

>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]

Probab=97.98  E-value=0.00013  Score=65.50  Aligned_cols=180  Identities=13%  Similarity=0.083  Sum_probs=105.6

Q ss_pred             CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc-------CCC-----CeE-EEeCCCCcchH
Q 019298           72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-------RPG-----ANI-LLPRPGFPIYE  138 (343)
Q Consensus        72 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-------~~g-----d~v-l~~~p~~~~~~  138 (343)
                      .|...++..-..+.+-....+-.|+.-..|.|+.-.|+.+.+....-+--       ..|     +-| ...+-+|.+..
T Consensus       132 TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~  211 (510)
T KOG0629|consen  132 TYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIK  211 (510)
T ss_pred             eEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHH
Confidence            34433333334444444444434555455666655555555554432211       111     334 45577888889


Q ss_pred             HHHHhcCc---eeEEeecCCCCCCCCCHHHHHhhhcC---C--ceEEEEeCC-CCCcccccCHHHHHHHHHHHhhcCcEE
Q 019298          139 LSAAFRHI---EVRHFDLLPDKGWEVDLDDIESLADQ---N--TVALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLV  209 (343)
Q Consensus       139 ~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~---~--~~~i~~~~p-~nptG~~~~~~~l~~l~~~~~~~~~~~  209 (343)
                      ..+..+|+   .++.++.+  ....+++++||+.+-+   +  .+.++-++. ..-.|..   +++..++++|++|++|+
T Consensus       212 kaAa~lg~gtd~c~~v~t~--e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAF---DdL~~iadiC~k~~lWm  286 (510)
T KOG0629|consen  212 KAAAFLGLGTDHCIKVKTD--ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAF---DDLNGIADICEKHKLWM  286 (510)
T ss_pred             HHHHHhccCCceeEEeccc--ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeecc---CcHHHHHHHHHhcCEEE
Confidence            99999994   56666654  3457999999997743   1  234333333 5677887   89999999999999999


Q ss_pred             EEccCCCccccCCCCCC-cccccCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298          210 IADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT  259 (343)
Q Consensus       210 i~D~ay~~~~~~~~~~~-~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~  259 (343)
                      .+|.||++...-+.... .+......  -=+.++.+|..| +.+.++..+.
T Consensus       287 HvDAAwGGglLmS~k~R~kl~Giera--~SvtwnpHK~~g-aplqCsa~l~  334 (510)
T KOG0629|consen  287 HVDAAWGGGLLMSRKHRHKLTGIERA--NSVTWNPHKLMG-APLQCSAFLT  334 (510)
T ss_pred             EeecccccccccChhhHhhccCcccc--CceeecHHHhhc-CcchhhHHHH
Confidence            99999998433222111 11111111  146778899954 4444554433

>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]

Probab=97.96  E-value=0.00047  Score=59.29  Aligned_cols=225  Identities=13%  Similarity=0.047  Sum_probs=128.2

Q ss_pred             CcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh---cCCCCeEE
Q 019298           53 TTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL---SRPGANIL  128 (343)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l---~~~gd~vl  128 (343)
                      .+|++.++...++..... +++.    ..+|-+....+...    --.-+-++++++++++..++++..   .+.-|.|.
T Consensus        62 chp~VV~A~~kQmat~~tN~RFl----hd~lv~cA~~l~st----lPeLsvc~F~NSGSEANDLALRLAR~ftkhqDvIt  133 (452)
T KOG1403|consen   62 CHPEVVRAGAKQMATISTNNRFL----HDELVQCARTLTST----LPELSVCFFVNSGSEANDLALRLARNFTKHQDVIT  133 (452)
T ss_pred             CCHHHHHHHHHHHhHhcccchhh----HHHHHHHHHHHhhc----CCCceEEEEecCCchhhHHHHHHHHhhcccCceEE
Confidence            678888887777654321 1222    23444444444321    012346678999999999998875   34445555


Q ss_pred             EeCCCCcchHHHH-Hhc------Cc-----eeEEeecCCCC-------------C-CCCCHHHHHhhhcC----Cce-EE
Q 019298          129 LPRPGFPIYELSA-AFR------HI-----EVRHFDLLPDK-------------G-WEVDLDDIESLADQ----NTV-AL  177 (343)
Q Consensus       129 ~~~p~~~~~~~~~-~~~------g~-----~~~~~~~~~~~-------------~-~~~d~~~l~~~~~~----~~~-~i  177 (343)
                      +. ..|.+..... ...      |.     +.+.+...|+-             + ...-.+.+++.+.+    ..+ +.
T Consensus       134 ld-HAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAA  212 (452)
T KOG1403|consen  134 LD-HAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAA  212 (452)
T ss_pred             Ee-chhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHH
Confidence            44 4554322211 110      11     12222111110             0 01112333333321    222 22


Q ss_pred             EEe-CCCCCcccccCH-HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEE
Q 019298          178 VII-NPGNPCGNVYSY-QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG  255 (343)
Q Consensus       178 ~~~-~p~nptG~~~~~-~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G  255 (343)
                      ++. +-++-.|+++|+ ...+++++..+.+|.+.|.||++-+|..-++.+.++..++-.+. |  -++.|.+ ..|..++
T Consensus       213 fiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPD-I--VtmgKpm-GNGhPVa  288 (452)
T KOG1403|consen  213 FIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPD-I--VTMGKPM-GNGHPVA  288 (452)
T ss_pred             HHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccc-h--heecccC-CCCCeee
Confidence            332 335667777655 56789999999999999999999998877777777666653222 3  3568994 6999999


Q ss_pred             EEEEeCCCCCCCchHHHHHHhhhh---ccccCcchHHHHHHHhccch
Q 019298          256 WFVTTDPCGMFRKPKVVERMKKYF---DILGDPATFIQVCIMYGCLS  299 (343)
Q Consensus       256 ~i~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~~l~  299 (343)
                      .+++.        +++.+.+...-   ..+++.+|.+-+++ .+.|+
T Consensus       289 ~Vatt--------keIA~Af~atgv~YFNTyGGnPVsCAv~-laVm~  326 (452)
T KOG1403|consen  289 AVATT--------KEIAQAFHATGVEYFNTYGGNPVSCAVG-LAVMR  326 (452)
T ss_pred             EEecc--------HHHHHHhccccceehhccCCCchhHHHH-HHHHH
Confidence            99884        47888887631   12456677776666 44443

>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]

Probab=97.72  E-value=0.025  Score=51.44  Aligned_cols=258  Identities=20%  Similarity=0.204  Sum_probs=138.5

Q ss_pred             eccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC-----CC----HHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298           40 LAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTA-----GL----PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        40 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~-----g~----~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  110 (343)
                      ++.|..+    .-.|+.+.+.+.+  +...+..|.|.+     |.    -++...++++.      +.+..|.=.-.+++
T Consensus        80 iG~GyY~----~~~P~vI~rnile--~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLT------Gm~VANASm~DeaT  147 (450)
T COG0403          80 IGAGYYD----TYTPPVILRNILE--NPEWYTAYTPYQPEISQGRLEALFEFQTLVADLT------GLDVANASMLDEAT  147 (450)
T ss_pred             ccCcccC----CcCcHHHHHHhhc--CccccccCCCCchhhhhHHHHHHHHHHHHHHHHh------CCCcccchhhhhHH
Confidence            4555532    3456666544433  122455677743     11    12334445554      34444555555555


Q ss_pred             HHHHHHHHHh---cCCCCeEEEeCCCCcchHHHHHhc----CceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCC
Q 019298          111 QAIDVAMALL---SRPGANILLPRPGFPIYELSAAFR----HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG  183 (343)
Q Consensus       111 ~al~~~~~~l---~~~gd~vl~~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~  183 (343)
                      .+=+.++.+.   ..+..+++++.-+|+.+....+.+    |.+++.++.+       |++.+++....++-.+++..|+
T Consensus       148 AaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~~~~~~~~gv~vQyP~  220 (450)
T COG0403         148 AAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-------DLDDLESADDGDVFGVLVQYPN  220 (450)
T ss_pred             HHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-------hhhhhhhccccCeEEEEEecCC
Confidence            5555544443   234589999999999988877654    3444444332       6788888722367788888887


Q ss_pred             CCcc-cccCHHHHHHHHHHHhhcCcEEEEc--cCCCccccCCCCCCcccccCCCCCEEEEccCccc---cCCCCCcEEEE
Q 019298          184 NPCG-NVYSYQHLQKLAETANKLKTLVIAD--EVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKR---WIVPGWRLGWF  257 (343)
Q Consensus       184 nptG-~~~~~~~l~~l~~~~~~~~~~~i~D--~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~---~~~~G~r~G~i  257 (343)
                       -.| ..   ++++++.+.+++++.++++=  -.-..+.      .+...++   -.|++++..-.   ++..|...||.
T Consensus       221 -~~G~~~---~d~~~l~~~~h~~~al~~v~aDplaL~LL------~pPGe~G---ADIvvG~~QrfGvPmgfGGPhag~f  287 (450)
T COG0403         221 -TFGIVE---EDLRALIEAAHSAGALVIVAADPLALGLL------KPPGEFG---ADIVVGSAQRFGVPMGFGGPHAGYF  287 (450)
T ss_pred             -CCCccc---hhHHHHHHHHhhcCCEEEEEechhHhhcc------CCccccC---CceEEecCcccCCCcCCCCcceeee
Confidence             455 44   77999999999999877652  2211111      1112222   33777775543   23356678887


Q ss_pred             EEeCCCCCC--------------CchHHHHHHh----hh---hccccCcch---HHHHHHHhccchhhHHHHHHHHHHHH
Q 019298          258 VTTDPCGMF--------------RKPKVVERMK----KY---FDILGDPAT---FIQVCIMYGCLSTIMQIMIHGNFLEN  313 (343)
Q Consensus       258 ~~~~~~~~~--------------~~~~~~~~l~----~~---~~~~~~~~~---~~~~a~~~~~l~~~~~~l~~~~~~~~  313 (343)
                      .+.+.- .+              .++.+.-.|+    +.   +..+.-+..   .+.++..++.+.-+..+.+..++..+
T Consensus       288 A~~~~~-~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~  366 (450)
T COG0403         288 AVKDEF-KRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHR  366 (450)
T ss_pred             eEhHhH-hhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence            775421 00              1222222221    11   111111111   11222223333333444447888888


Q ss_pred             HHHHHHHhhcCCC-Ccee
Q 019298          314 FAGSCVPSYKLIP-ELIN  330 (343)
Q Consensus       314 ~~~~~~~~L~~~~-g~~~  330 (343)
                      ...++.+.|.+.. |+.+
T Consensus       367 ~a~~la~~L~~~~~g~~~  384 (450)
T COG0403         367 LAAYLAAGLKEIGAGVEL  384 (450)
T ss_pred             HHHHHHHHHhhcCCceEe
Confidence            8999999999642 4554

>PLN02672 methionine S-methyltransferase

Probab=97.54  E-value=0.0046  Score=63.61  Aligned_cols=217  Identities=17%  Similarity=0.150  Sum_probs=137.3

Q ss_pred             HHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc------CCCCeEEEe
Q 019298           57 ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS------RPGANILLP  130 (343)
Q Consensus        57 ~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~------~~gd~vl~~  130 (343)
                      ....+...+.+..+.-|.++.|...+|..||.|++..+++++.+++|++.++-..+|..+++.+.      +.+.+..++
T Consensus       406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  485 (1082)
T PLN02672        406 FLAYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLP  485 (1082)
T ss_pred             HHHHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCC
Confidence            35666777777777789999999999999999999999999999999999999999988887752      333222222


Q ss_pred             CCCCcchHHHHHhcC--------ceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHH
Q 019298          131 RPGFPIYELSAAFRH--------IEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAET  201 (343)
Q Consensus       131 ~p~~~~~~~~~~~~g--------~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~  201 (343)
                          ..|.......|        ..+..++. +.     .-+.+.+.++. ++++++..-...   -..+-...+.|.+.
T Consensus       486 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  552 (1082)
T PLN02672        486 ----KKWLTSLAIENATSDSKSDDVITVIEA-PR-----QSDLVIELIKKLKPQVVVTGMADF---EMRTSTAFEHLLNV  552 (1082)
T ss_pred             ----HHHHhHhhhhcccccCccCCeEEEEeC-CC-----cchHHHHHHHhCCCeEEEEeccch---hhhhHHHHHHHHHH
Confidence                12222222222        22222221 11     12344445544 455555433332   22233678999999


Q ss_pred             HhhcCcEEEEccCCCc-cccCCCCCCcccccC---CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh
Q 019298          202 ANKLKTLVIADEVYGH-LVFGDKPFVPMGVFG---STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK  277 (343)
Q Consensus       202 ~~~~~~~~i~D~ay~~-~~~~~~~~~~~~~~~---~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~  277 (343)
                      +++.|..++.|..-.. +.........+..+.   ...+..++.++-|.--.+.+-+++++.-+       ..+.+.+.+
T Consensus       553 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~  625 (1082)
T PLN02672        553 TAEIGARLFLDISDHLELSSLPGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFVISEN-------EAVLKALSK  625 (1082)
T ss_pred             HHhhCcEEEEehhhheeeccCCCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEEecCc-------HHHHHHHHH
Confidence            9999999999987543 221111111111111   11255677789999777999999998632       457777777


Q ss_pred             hhcc-ccCcchHHHHHH
Q 019298          278 YFDI-LGDPATFIQVCI  293 (343)
Q Consensus       278 ~~~~-~~~~~~~~~~a~  293 (343)
                      .... .++...++|...
T Consensus       626 ~~~~~~~~~~~~~~~~~  642 (1082)
T PLN02672        626 TGEVLEGRTAIISQFYY  642 (1082)
T ss_pred             HHHhhccchHHHHHHHH
Confidence            6543 456666777554

>PRK12566 glycine dehydrogenase; Provisional

Probab=97.19  E-value=0.12  Score=52.66  Aligned_cols=187  Identities=18%  Similarity=0.196  Sum_probs=97.8

Q ss_pred             EeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC-----CC----HHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298           39 SLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTA-----GL----PLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (343)
Q Consensus        39 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~-----g~----~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~  109 (343)
                      -++.|..+    .-.|..+.+.+.+  +...+..|.|.+     |.    -++...++++.      +.+..|.-+-.++
T Consensus        83 fiG~G~y~----~~~P~vi~~~i~~--~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~Lt------Gm~vaNASl~D~a  150 (954)
T PRK12566         83 LIGMGYHG----TVTPTVILRNVLE--NPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLT------GLDLANASLLDEA  150 (954)
T ss_pred             cccccccC----CcCcHHHHHHHHh--CchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHh------Cchhhhhhhccch
Confidence            34555522    3345555454433  122355677743     21    12444455554      3343344444444


Q ss_pred             H---HHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhc----CceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCC
Q 019298          110 T---QAIDVAMALLSRPGANILLPRPGFPIYELSAAFR----HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP  182 (343)
Q Consensus       110 ~---~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p  182 (343)
                      +   +|+.++.+.-.....+|++++-.|+.+....+.+    |.+++.             +++++.+.+++..+++.+|
T Consensus       151 tA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~~~~~~~v~vq~P  217 (954)
T PRK12566        151 TAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLAAHAVFGALLQYP  217 (954)
T ss_pred             hHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcCCCCEEEEEEECC
Confidence            4   4444433322222468999999998877655543    444442             3334444446667777788


Q ss_pred             CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEcc---CccccCCCCCcEEEEEE
Q 019298          183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS---LSKRWIVPGWRLGWFVT  259 (343)
Q Consensus       183 ~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S---~sK~~~~~G~r~G~i~~  259 (343)
                      + -.|.+   ++++++.++++++|.++|+ .+-- +..+-  ..+...+   +-.|++++   |.=-++..|.-.||+.+
T Consensus       218 ~-~~G~i---~d~~~i~~~~h~~gal~~~-~~d~-laL~l--l~~Pge~---GADI~vG~~Q~fGvp~~~GGP~ag~~a~  286 (954)
T PRK12566        218 D-THGEI---RDLRPLIDQLHGQQALACV-AADL-LSLLV--LTPPGEL---GADVVLGSTQRFGVPMGYGGPHAAYFAC  286 (954)
T ss_pred             C-CceEE---ccHHHHHHHHHHcCCEEEE-EeCH-HHHhC--CCChhhc---CCcEEeeCCCcCCCCCCCCCCCeeeeee
Confidence            6 57888   7799999999999988653 2211 11110  0111222   23366663   23333345566788777


Q ss_pred             eC
Q 019298          260 TD  261 (343)
Q Consensus       260 ~~  261 (343)
                      .+
T Consensus       287 ~~  288 (954)
T PRK12566        287 RD  288 (954)
T ss_pred             hH
Confidence            54

>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]

Probab=97.09  E-value=0.049  Score=48.61  Aligned_cols=252  Identities=13%  Similarity=0.064  Sum_probs=124.5

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-----C-CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA-----P-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-----~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g  108 (343)
                      ++..||+.|-      -..++++++..++.+.+-.-.+++     . ..-...+.+...+-++..++++-+.+=+++-.|
T Consensus         4 ~~~~nFsaGP------a~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGG   77 (365)
T COG1932           4 PRVYNFSAGP------AALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGG   77 (365)
T ss_pred             CCCCCCCCCc------ccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCc
Confidence            4567888884      234566655555554431110000     0 111122333333333333444433333445566


Q ss_pred             hHHHHHHHHHHhcCCCCeEEEeCCCCcchH-HHHHhcCceeEEeecC-CCC--CCCCCHHHHHhhhcCCceEEEEeCCCC
Q 019298          109 CTQAIDVAMALLSRPGANILLPRPGFPIYE-LSAAFRHIEVRHFDLL-PDK--GWEVDLDDIESLADQNTVALVIINPGN  184 (343)
Q Consensus       109 ~~~al~~~~~~l~~~gd~vl~~~p~~~~~~-~~~~~~g~~~~~~~~~-~~~--~~~~d~~~l~~~~~~~~~~i~~~~p~n  184 (343)
                      ++.....+...|.....+-.+..-.|.... .-++..+......... .+.  +.-++++...  +.++...|.+|.-..
T Consensus        78 at~qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~NeT  155 (365)
T COG1932          78 ATGQFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNET  155 (365)
T ss_pred             cHHHHHHHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cCCCccEEEEecCCc
Confidence            799999999988765432123333443321 2233334212211111 111  2223444333  222222355555455


Q ss_pred             CcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCC
Q 019298          185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG  264 (343)
Q Consensus       185 ptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~  264 (343)
                      -+|+-++.  ...+.     .+.++|+|.....+.    ....+..++     ++..|.-|.+|..|  ++.++.+.   
T Consensus       156 i~Gv~v~~--~p~~~-----~~~~~v~D~SS~ils----r~iDvsk~d-----viyagaQKnlGpaG--ltvvIvr~---  214 (365)
T COG1932         156 ISGVEVPE--LPDIG-----SDGLLVADASSAILS----RPIDVSKYD-----VIYAGAQKNLGPAG--LTVVIVRP---  214 (365)
T ss_pred             ccceEccC--CCCCC-----CCceEEEecccHHhc----CCCChhHcc-----eEEEehhhccCccc--eEEEEEcH---
Confidence            77777652  11111     137899998876643    222222222     67778999999999  78888753   


Q ss_pred             CCCchHHHHHHhhh-------------hcccc-CcchHHHHHHHhccchhhHHHHH-------HHHHHHHHHHHHHHhhc
Q 019298          265 MFRKPKVVERMKKY-------------FDILG-DPATFIQVCIMYGCLSTIMQIMI-------HGNFLENFAGSCVPSYK  323 (343)
Q Consensus       265 ~~~~~~~~~~l~~~-------------~~~~~-~~~~~~~~a~~~~~l~~~~~~l~-------~~~~~~~~~~~~~~~L~  323 (343)
                           +++++.+..             .+... .|+.++.... .-.    -+|+.       ..++-+++.+.+.+.+.
T Consensus       215 -----~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~-~lv----~~Wlk~~GGl~~~~~rn~~ka~~LY~~id  284 (365)
T COG1932         215 -----DLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLL-GLV----FKWLKSQGGLEALEARNQAKAQLLYDWID  284 (365)
T ss_pred             -----HHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHH-HHH----HHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence                 455555442             11223 3333433333 111    45555       67777788888888887


Q ss_pred             CC
Q 019298          324 LI  325 (343)
Q Consensus       324 ~~  325 (343)
                      +.
T Consensus       285 ~s  286 (365)
T COG1932         285 KS  286 (365)
T ss_pred             hC
Confidence            65

>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]

Probab=96.96  E-value=0.016  Score=51.34  Aligned_cols=76  Identities=24%  Similarity=0.199  Sum_probs=49.3

Q ss_pred             CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCC-CCcccccCCCCCEEEEccCccccCC
Q 019298          173 NTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP-FVPMGVFGSTVPILTLGSLSKRWIV  249 (343)
Q Consensus       173 ~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~-~~~~~~~~~~~~~i~~~S~sK~~~~  249 (343)
                      .+.+.++..| +.-.|.- .|++..+.|.+++++|++.+|+||++.+..-.|.- .+.-..++.-..   +-+|||-|-.
T Consensus       270 ~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD---~vTFSKK~q~  346 (484)
T KOG1405|consen  270 KPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPD---VVTFSKKFQT  346 (484)
T ss_pred             CCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCcc---ceehhhhhhc
Confidence            3556677777 5555554 68899999999999999999999999875444321 000111111112   2368999755


Q ss_pred             CC
Q 019298          250 PG  251 (343)
Q Consensus       250 ~G  251 (343)
                      .|
T Consensus       347 gG  348 (484)
T KOG1405|consen  347 GG  348 (484)
T ss_pred             Cc
Confidence            54

>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]

Probab=96.55  E-value=0.0083  Score=50.89  Aligned_cols=174  Identities=17%  Similarity=0.199  Sum_probs=94.4

Q ss_pred             CCCCCCCcEEEecChHHHHHHHHHHhc--CCC-CeEEEeCCCCcchHHHHHhcCceeEEeecCCC-CCCCCCHHHHHhhh
Q 019298           95 PYKLTPNDVFVTSGCTQAIDVAMALLS--RPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLPD-KGWEVDLDDIESLA  170 (343)
Q Consensus        95 ~~~~~~~~i~~~~g~~~al~~~~~~l~--~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~~  170 (343)
                      |.+.....+++--.+-..+.+.+.++.  +|. ..|+-+.-.--......-..|.+.+.++-..+ +...-|++.+++.+
T Consensus        71 glhav~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~~i  150 (432)
T KOG3843|consen   71 GLHAVANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEAII  150 (432)
T ss_pred             hhhhhhceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHHHH
Confidence            444455555544333334555555553  343 33443444444444555667888776653332 33334677777777


Q ss_pred             cC-Cce-EEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCC-EEEEccCcccc
Q 019298          171 DQ-NTV-ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRW  247 (343)
Q Consensus       171 ~~-~~~-~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~-~i~~~S~sK~~  247 (343)
                      .+ +.. .+++.+... .=..-+++.+++|+.+|..|++.-|+..+|+.-.  ++....+.....-++ ..++.|+.|.|
T Consensus       151 ee~g~dcilci~stts-cfapr~pd~leaiaaica~~diphivnnayglqs--ee~i~~iaa~~~~grida~vqsldknf  227 (432)
T KOG3843|consen  151 EELGEDCILCIHSTTS-CFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQS--EECIHKIAAAAECGRIDAFVQSLDKNF  227 (432)
T ss_pred             HHhCCceEEEEeeccc-ccCCCCCchHHHHHHHHHccCchhhhccccccch--HHHHHHHHHHhhhccHHHHHHHhhhcc
Confidence            55 333 333322211 1111234789999999999999999999998632  111112222222233 26789999999


Q ss_pred             CCCCCcEEE-EEEeCCCCCCCchHHHHHHhhhhc
Q 019298          248 IVPGWRLGW-FVTTDPCGMFRKPKVVERMKKYFD  280 (343)
Q Consensus       248 ~~~G~r~G~-i~~~~~~~~~~~~~~~~~l~~~~~  280 (343)
                      ..|   +|- +++.=      +..+++.+.+...
T Consensus       228 ~vp---vggaiia~f------k~n~iq~iak~yp  252 (432)
T KOG3843|consen  228 MVP---VGGAIIAAF------KDNFIQEIAKMYP  252 (432)
T ss_pred             eee---cchhHhhHh------HHHHHHHHHHhCC
Confidence            876   343 33311      2346666666654

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=96.27  E-value=0.14  Score=49.23  Aligned_cols=130  Identities=16%  Similarity=0.184  Sum_probs=89.1

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEE--ecChH---HHHHHHHHHhc-CCC----CeEEEeCCCCcchHHHHHhcCc
Q 019298           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFV--TSGCT---QAIDVAMALLS-RPG----ANILLPRPGFPIYELSAAFRHI  146 (343)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~--~~g~~---~al~~~~~~l~-~~g----d~vl~~~p~~~~~~~~~~~~g~  146 (343)
                      +|+.++...+..++-...    .-|++.+  .+|++   .++. ++++.. ..|    ..+++|...|+.....+.++|.
T Consensus       578 qGY~~lf~~Le~~Lc~iT----G~D~~s~QPNsGA~GEYaGL~-~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Magm  652 (1001)
T KOG2040|consen  578 QGYQQLFTELEKDLCEIT----GFDSFSLQPNSGAQGEYAGLR-VIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGM  652 (1001)
T ss_pred             hhHHHHHHHHHHHhheee----cccceeecCCCCcccchhhHH-HHHHHHHhccCCcceeEEEeecccCCChhhHHhcCC
Confidence            466677777777664322    3345543  44443   3443 344442 233    4688999999999999999999


Q ss_pred             eeEEeecCCCCCCCCCHHHHHhhhcC---CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCC
Q 019298          147 EVRHFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG  216 (343)
Q Consensus       147 ~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~  216 (343)
                      +++.+..+.  +..+|..+|++....   +-.++.+.-|+.- |+.  .+.+++++++..+||.-+..|.+--
T Consensus       653 kvvpV~~~~--~G~id~~dLk~kaekh~~~Laa~MvTYPST~-Gvf--E~~i~d~cd~iHehGGQVYlDGANM  720 (1001)
T KOG2040|consen  653 KVVPVGCDA--NGNIDMVDLKAKAEKHKDNLAALMVTYPSTH-GVF--EEGIDDICDIIHEHGGQVYLDGANM  720 (1001)
T ss_pred             EEEEeeccC--CCCccHHHHHHHHHHhhhhhheeEEeccccc-ccc--cccHHHHHHHHHhcCCEEEecCCCc
Confidence            999998764  456999999886654   3345666666542 333  2678999999999999999997754

>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]

Probab=92.06  E-value=4.2  Score=35.84  Aligned_cols=193  Identities=15%  Similarity=0.116  Sum_probs=116.8

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhc-------CCCCCCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCcEE
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLS-------EKFNGYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVF  104 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~-------~~~~~Y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~  104 (343)
                      ..+.|-|+.+.      ++ .|...+..+...++.       ++..+--| ..+......-++...      +...++|.
T Consensus        65 d~~~iYlcGNS------LGLmPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iV------GA~e~Eva  132 (465)
T KOG3846|consen   65 DKPVIYLCGNS------LGLMPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIV------GAQENEVA  132 (465)
T ss_pred             CCCeEEEeccc------cccCchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhc------cCCchhhh
Confidence            44555555544      33 455556666665543       22222222 224455566666666      56788999


Q ss_pred             EecChHHHHHHHHHHhcCCC---CeEEEeCCCCcc----hHHHHHhcCceeEE--eecCCC-CCCCCCHHHHHhhhcC--
Q 019298          105 VTSGCTQAIDVAMALLSRPG---ANILLPRPGFPI----YELSAAFRHIEVRH--FDLLPD-KGWEVDLDDIESLADQ--  172 (343)
Q Consensus       105 ~~~g~~~al~~~~~~l~~~g---d~vl~~~p~~~~----~~~~~~~~g~~~~~--~~~~~~-~~~~~d~~~l~~~~~~--  172 (343)
                      +.++-+..+..++.++.+|-   -+|++..-.|++    +...++..|..+..  +.+.+. +...+..+++.+.+..  
T Consensus       133 vmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkng  212 (465)
T KOG3846|consen  133 VMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNG  212 (465)
T ss_pred             hHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcC
Confidence            99999999999999998764   367777666543    45566666765432  222332 2334667777776643  


Q ss_pred             -CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccC
Q 019298          173 -NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI  248 (343)
Q Consensus       173 -~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~  248 (343)
                       ...+++++..+.-||+.++.   .+|-..-...|.++=.|-+++.    +.-+..+   ...+-.+.|+.--|-..
T Consensus       213 DeiA~v~fSGvqyYTGQ~Fdi---~aIT~Agq~kgc~VGfDLAHAv----gNVpL~L---HdWgVDFACWCSYKYln  279 (465)
T KOG3846|consen  213 DEIALVCFSGVQYYTGQYFDI---GAITFAGQFKGCLVGFDLAHAV----GNVPLQL---HDWGVDFACWCSYKYLN  279 (465)
T ss_pred             CeEEEEEeecceeecccccch---hhhhhcccCCCcEechhhhhhh----cCCceEE---eecCCceEEEeeecccc
Confidence             34455666779999999765   4444444466888888988875    2222222   22233488888777743

>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]

Probab=85.81  E-value=14  Score=31.04  Aligned_cols=151  Identities=17%  Similarity=0.183  Sum_probs=85.9

Q ss_pred             cEEEecChHHHHHHHHHHhcCCCCeE--------------EEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHH
Q 019298          102 DVFVTSGCTQAIDVAMALLSRPGANI--------------LLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIE  167 (343)
Q Consensus       102 ~i~~~~g~~~al~~~~~~l~~~gd~v--------------l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~  167 (343)
                      -+.+-+|+.++...+..++ +.|-.|              -...|........++..|..+......-+  ..-..++|.
T Consensus         3 ~~aL~SGGKDS~~Al~~a~-~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~--~e~eve~L~   79 (223)
T COG2102           3 VIALYSGGKDSFYALYLAL-EEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGE--EEREVEELK   79 (223)
T ss_pred             EEEEEecCcHHHHHHHHHH-HcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCcc--chhhHHHHH
Confidence            3567889998887776665 344221              11122222234466777888777765431  223467777


Q ss_pred             hhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccc
Q 019298          168 SLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKR  246 (343)
Q Consensus       168 ~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~  246 (343)
                      ++++. +...|+       +|.+++..+...+-++|++.|+.+     |.+++--++. .-+...-..+--+.|-+.||.
T Consensus        80 ~~l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~-----~~PLWg~d~~-ell~e~~~~Gf~~~Iv~Vsa~  146 (223)
T COG2102          80 EALRRLKVDGIV-------AGAIASEYQKERVERLCEELGLKV-----YAPLWGRDPE-ELLEEMVEAGFEAIIVAVSAE  146 (223)
T ss_pred             HHHHhCcccEEE-------EchhhhHHHHHHHHHHHHHhCCEE-----eecccCCCHH-HHHHHHHHcCCeEEEEEEecc
Confidence            77654 444555       799999999999999999998874     4455422211 111111111111444456666


Q ss_pred             cCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh
Q 019298          247 WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY  278 (343)
Q Consensus       247 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~  278 (343)
                       +++..=+|.-+.         .+.++.++..
T Consensus       147 -gL~~~~lGr~i~---------~~~~e~l~~l  168 (223)
T COG2102         147 -GLDESWLGRRID---------REFLEELKSL  168 (223)
T ss_pred             -CCChHHhCCccC---------HHHHHHHHHH
Confidence             666533444332         3566666665

>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]

Probab=85.81  E-value=24  Score=30.99  Aligned_cols=196  Identities=13%  Similarity=0.044  Sum_probs=97.2

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC-------CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE-------KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT  106 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~  106 (343)
                      +..++||+-|-     .-.+.+.+.++-++.+.-.       ..+.- + .....+.+.....+.+.++++-.-+-+++-
T Consensus         5 ~~~vvnFaaGP-----Aklp~~VL~e~qkdl~n~~g~GisV~EmSHR-s-k~f~kii~~tes~lreLlniPdn~~vlf~Q   77 (370)
T KOG2790|consen    5 PERVVNFAAGP-----AKLPESVLLEAQKDLLNFNGSGISVMEMSHR-S-KDFAKIINDTESLLRELLNIPDNYKVLFLQ   77 (370)
T ss_pred             ccceeecCCCc-----ccCCHHHHHHHHHHhhccCCCcceEEEeccc-c-hhHHHHHHHHHHHHHHHHcCCCceeEEEEe
Confidence            67889999884     2223444455444444311       01111 1 112233333333333333433333334556


Q ss_pred             cChHHHHHHHHHHhc--CCC---CeEEEeCCCCcchHHHHHhcCce-eEEeecCCCC-CCCCCHHHHHhhhcCCceEEEE
Q 019298          107 SGCTQAIDVAMALLS--RPG---ANILLPRPGFPIYELSAAFRHIE-VRHFDLLPDK-GWEVDLDDIESLADQNTVALVI  179 (343)
Q Consensus       107 ~g~~~al~~~~~~l~--~~g---d~vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~~~-~~~~d~~~l~~~~~~~~~~i~~  179 (343)
                      .|+++-+..+...|.  +.|   |.|+.-+++--.+... +.+|.. .+..+..+.. +--+|.+.++.  +.+.+.+++
T Consensus        78 GGGt~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EA-kk~~~~~~V~~~~k~y~ygkvPd~~~w~~--~~da~yvyy  154 (370)
T KOG2790|consen   78 GGGTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEA-KKYGTPNIVIPKLKSYTYGKVPDPSTWEL--NPDASYVYY  154 (370)
T ss_pred             CCCcccccccchhhhccccCCccceEEeccccHHHHHHH-HhhCCceEEeccccccccCcCCChhhccc--CCCccEEEE
Confidence            777877777776665  444   5666555554444433 334433 3333332221 12245444443  223446667


Q ss_pred             eCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE
Q 019298          180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL  254 (343)
Q Consensus       180 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~  254 (343)
                      |.--.-.|+-++.-.      +-.-++.+++.|...-.+.    .+..+.     ..-+++.+..|..|.+|..+
T Consensus       155 CaNETVHGVEf~~~P------~~~~~~~vlVaDmSSnflS----rpvDvs-----k~gvi~aGAQKN~G~aG~Tv  214 (370)
T KOG2790|consen  155 CANETVHGVEFDFIP------VNDPKGAVLVADMSSNFLS----RPVDVS-----KFGVIFAGAQKNVGPAGVTV  214 (370)
T ss_pred             ecCceeeceecCCCC------CCCCCCceEEEecccchhc----CCccch-----hcceEEeccccccCccccEE
Confidence            654445566554322      1124578888888765432    122222     22377888999999998543

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=83.00  E-value=14  Score=31.18  Aligned_cols=85  Identities=14%  Similarity=0.047  Sum_probs=50.1

Q ss_pred             HHHHhcCCCC-eEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298          116 AMALLSRPGA-NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (343)
Q Consensus       116 ~~~~l~~~gd-~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~  194 (343)
                      +++.|...+- ..++.++.-......++..|.+++..+++       |.+.|.++++ +...++++.+.....   ..+.
T Consensus        14 v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~-------~~~~l~~al~-g~d~v~~~~~~~~~~---~~~~   82 (233)
T PF05368_consen   14 VVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYD-------DPESLVAALK-GVDAVFSVTPPSHPS---ELEQ   82 (233)
T ss_dssp             HHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT--------HHHHHHHHT-TCSEEEEESSCSCCC---HHHH
T ss_pred             HHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccC-------CHHHHHHHHc-CCceEEeecCcchhh---hhhh
Confidence            4445554553 44455555333344456678887755432       6899999888 455566666643322   2256


Q ss_pred             HHHHHHHHhhcCcEEEE
Q 019298          195 LQKLAETANKLKTLVIA  211 (343)
Q Consensus       195 l~~l~~~~~~~~~~~i~  211 (343)
                      -..+++.|++.|+-.++
T Consensus        83 ~~~li~Aa~~agVk~~v   99 (233)
T PF05368_consen   83 QKNLIDAAKAAGVKHFV   99 (233)
T ss_dssp             HHHHHHHHHHHT-SEEE
T ss_pred             hhhHHHhhhccccceEE
Confidence            78899999998876665

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=82.85  E-value=21  Score=31.55  Aligned_cols=101  Identities=14%  Similarity=0.091  Sum_probs=58.9

Q ss_pred             CCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh---cCceeEEeecCCCCCCCCCHHHHHhhhcC--
Q 019298           98 LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF---RHIEVRHFDLLPDKGWEVDLDDIESLADQ--  172 (343)
Q Consensus        98 ~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--  172 (343)
                      +..+-|++|.|++..=..+..-+.+.|.++++.+-.-.+.....+.   .| +++.+..+-.+.  -++..+.+.+++  
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~--eei~~~a~~Vk~e~  112 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDR--EEIYRLAKKVKKEV  112 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCH--HHHHHHHHHHHHhc
Confidence            4556677777777777777777888888877666555444443333   24 566665543221  123333334433  


Q ss_pred             CceEEEEeCCC---CCcccccCHHHHHHHHHH
Q 019298          173 NTVALVIINPG---NPCGNVYSYQHLQKLAET  201 (343)
Q Consensus       173 ~~~~i~~~~p~---nptG~~~~~~~l~~l~~~  201 (343)
                      +..-|+++|..   +-.....+.+++++..++
T Consensus       113 G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~v  144 (300)
T KOG1201|consen  113 GDVDILVNNAGIVTGKKLLDCSDEEIQKTFDV  144 (300)
T ss_pred             CCceEEEeccccccCCCccCCCHHHHHHHHHH
Confidence            45567777773   334444677888886554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	343
3pdx_A	402	Crystal Structural Of Mouse Tyrosine Aminotransfera		6e-58
3dyd_A	427	Human Tyrosine Aminotransferase Length = 427		1e-56
1bw0_A	416	Crystal Structure Of Tyrosine Aminotransferase From		2e-40
1xi9_A	406	Alanine Aminotransferase From Pyrococcus Furiosus P		1e-29
1v2d_A	381	Crystal Structure Of T.Th Hb8 Glutamine Aminotransf		1e-21
1gc3_A	385	Thermus Thermophilus Aspartate Aminotransferase Tet		6e-19
1b5o_A	385	Thermus Thermophilus Aspartate Aminotransferase Sin		6e-19
1gck_A	385	Thermus Thermophilus Aspartate Aminotransferase Dou		7e-19
5bj3_A	385	Thermus Thermophilus Aspartate Aminotransferase Tet		7e-19
1bkg_A	385	Aspartate Aminotransferase From Thermus Thermophilu		1e-18
1bjw_A	382	Aspartate Aminotransferase From Thermus Thermophilu		4e-18
1gde_A	389	Crystal Structure Of Pyrococcus Protein A-1 E-form		1e-17
1dju_A	388	Crystal Structure Of Aromatic Aminotransferase From		1e-17
2gb3_A	409	Crystal Structure Of Aspartate Aminotransferase (Tm		1e-16
2o0r_A	411	The Three-Dimensional Structure Of N-Succinyldiamin		3e-16
1o4s_A	389	Crystal Structure Of Aspartate Aminotransferase (Tm		3e-15
3b46_A	447	Crystal Structure Of Bna3p, A Putative Kynurenine A		1e-14
3tcm_A	500	Crystal Structure Of Alanine Aminotransferase From		9e-14
3e2z_B	410	Crystal Structure Of Mouse Kynurenine Aminotransfer		1e-13
1yiy_A	429	Aedes Aegypti Kynurenine Aminotransferase Length =		1e-13
1w7n_A	422	Crystal Structure Of Human Kynurenine Aminotransfer		3e-13
1yiz_A	429	Aedes Aegypti Kynurenine Aminotrasferase Length = 4		5e-13
3e2f_A	410	Crystal Structure Of Mouse Kynurenine Aminotransfer		6e-13
1u08_A	386	Crystal Structure And Reactivity Of Ybdl From Esche		1e-12
1j32_A	388	Aspartate Aminotransferase From Phormidium Lapideum		1e-12
3fvs_A	422	Human Kynurenine Aminotransferase I In Complex With		1e-12
1w7l_A	422	Crystal Structure Of Human Kynurenine Aminotransfer		1e-12
3aov_A	448	Crystal Structure Of Pyrococcus Horikoshii Kynureni		1e-12
3ele_A	398	Crystal Structure Of Amino Transferase (rer07020700		1e-12
1x0m_A	403	A Human Kynurenine Aminotransferase Ii Homologue Fr		2e-12
2zc0_A	407	Crystal Structure Of An Archaeal Alanine:glyoxylate		3e-12
1wst_A	417	Crystal Structure Of Multiple Substrate Aminotransf		5e-12
2x5d_A	412	Crystal Structure Of A Probable Aminotransferase Fr		2e-11
3f6t_A	533	Crystal Structure Of Aspartate Aminotransferase (E.		3e-11
3ihj_A	498	Human Alanine Aminotransferase 2 In Complex With Pl		4e-11
3fdb_A	377	Crystal Structure Of A Putative Plp-Dependent Beta-		1e-10
3op7_A	375	Crystal Structure Of A Plp-Dependent Aminotransfera		1e-10
3b1c_A	392	Crystal Structure Of Betac-S Lyase From Streptococc		2e-10
2z61_A	370	Crystal Structure Of Mj0684 From Methanococcus Jann		2e-10
3dzz_A	391	Crystal Structure Of A Putative Plp-Dependent Amino		7e-10
1iax_A	428	Crystal Structure Of Acc Synthase Complexed With Pl		1e-09
3piu_A	410	High-Resolution Structure Of Native Malus Domestica		2e-09
4fl0_A	456	Crystal Structure Of Ald1 From Arabidopsis Thaliana		2e-09
1m7y_A	435	Crystal Structure Of Apple Acc Synthase In Complex		3e-09
1b8g_A	429	1-aminocyclopropane-1-carboxylate Synthase Length =		3e-09
3h14_A	391	Crystal Structure Of A Putative Aminotransferase Fr		3e-09
1ynu_A	473	Crystal Structure Of Apple Acc Synthase In Complex		4e-09
1lkc_A	364	Crystal Structure Of L-Threonine-O-3-Phosphate Deca		6e-09
2z1z_A	432	Crystal Structure Of Ll-diaminopimelate Aminotransf		1e-08
3eia_A	432	Crystal Structure Of K270q Variant Of Ll-Diaminopim		2e-08
3jtx_A	396	Crystal Structure Of Aminotransferase (np_283882.1)		2e-08
3ei8_A	432	Crystal Structure Of K270n Variant Of Ll-Diaminopim		3e-08
3ftb_A	361	The Crystal Structure Of The Histidinol-Phosphate A		9e-08
2z20_A	432	Crystal Structure Of Ll-diaminopimelate Aminotransf		1e-07
3l8a_A	421	Crystal Structure Of Metc From Streptococcus Mutans		3e-07
1c7n_A	399	Crystal Structure Of Cystalysin From Treponema Dent		4e-07
4dgt_A	391	Crystal Structure Of Plp-Bound Putative Aminotransf		8e-07
3t32_B	383	Crystal Structure Of A Putative C-S Lyase From Baci		8e-07
2egy_A	397	Crystal Structure Of Lysn, Alpha-Aminoadipate Amino		2e-06
1d2f_A	390	X-Ray Structure Of Maly From Escherichia Coli: A Py		2e-06
3ffh_A	363	The Crystal Structure Of Histidinol-phosphate Amino		2e-06
3cq5_A	369	Histidinol-Phosphate Aminotransferase From Coryneba		2e-06
3cq4_A	376	Histidinol-Phosphate Aminotransferase From Coryneba		2e-06
3asa_A	400	Crystal Structure Of Apo-Ll-Diaminopimelate Aminotr		3e-06
1vp4_A	425	Crystal Structure Of A Putative Aminotransferase (T		4e-06
3cq6_A	369	Histidinol-Phosphate Aminotransferase From Coryneba		8e-06
3ezs_A	376	Crystal Structure Of Aminotransferase Aspb (Np_2074		1e-05
4ge7_A	439	Kynurenine Aminotransferase Ii Inhibitors Length =		2e-05
3euc_A	367	Crystal Structure Of Histidinol-Phosphate Aminotran		2e-05
4gdy_A	439	Kynurenine Aminotransferase Ii Inhibitors Length =		3e-05
2r2n_A	425	The Crystal Structure Of Human Kynurenine Aminotran		5e-05
2xh1_A	425	Crystal Structure Of Human Kat Ii-Inhibitor Complex		6e-05
2dou_A	376	Probable N-Succinyldiaminopimelate Aminotransferase		6e-05
3ue8_A	439	Kynurenine Aminotransferase Ii Inhibitors Length =		6e-05
3qgu_A	449	L,L-Diaminopimelate Aminotransferase From Chalmydom		9e-05
2zy2_A	544	Dodecameric L-Aspartate Beta-Decarboxylase Length =		1e-04
2qlr_A	425	Crystal Structure Of Human Kynurenine Aminotransfer		1e-04
2vgz_A	427	Crystal Structure Of Human Kynurenine Aminotransfer		1e-04
3nra_A	407	Crystal Structure Of An Aspartate Aminotransferase		3e-04

>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase Length = 402

Iteration: 1
 Score =  221 bits (562), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 124/309 (40%), Positives = 175/309 (56%), Gaps = 15/309 (4%)
Query: 35  KKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYL-SRD 93
           K VISL++GDPTV                   S K+NGYAP+ G   +R  +A Y    +
Sbjct: 31  KTVISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGYLSSREEVASYYHCPE 90
Query: 94  LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL 153
            P  L   DV +TSGC+QAI++ +A+L+ PG NIL+PRPGF +Y   A    IEV+ ++L
Sbjct: 91  AP--LEAKDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYRTLAESMGIEVKLYNL 148
Query: 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
           LP+K WE+DL  +ESL D+ T  LV+ NP NPCG+V+S +HLQK+   A +    ++ADE
Sbjct: 149 LPEKSWEIDLKQLESLIDEKTACLVVNNPSNPCGSVFSKRHLQKILAVAERQCVPILADE 208
Query: 214 VYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273
           +YG +VF D  + PM    + VPIL+ G L+ RW+VPGWRLGW +  D   +F       
Sbjct: 209 IYGDMVFSDCKYEPMATLSTNVPILSCGGLAXRWLVPGWRLGWILIHDRRDIFGNEIRDG 268
Query: 274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHG------NFLENFAGSCVPSYKLIPE 327
            +K    ILG P T +Q     G L +I+Q           +FL++ A  C  +   IP 
Sbjct: 269 LVKLSQRILG-PCTIVQ-----GALKSILQRTPQEFYQDTLSFLKSNADLCYGALSAIPG 322
Query: 328 LINFKSTGS 336
           L   + +G+
Sbjct: 323 LQPVRPSGA 331

>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase Length = 427

Iteration: 1
 Score =  216 bits (550), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 123/309 (39%), Positives = 176/309 (56%), Gaps = 15/309 (4%)
Query: 35  KKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYL-SRD 93
           K +ISL++GDPTV                   S K+NGYAP+ G   +R  IA Y    +
Sbjct: 54  KTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCPE 113
Query: 94  LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL 153
            P  L   DV +TSGC+QAID+ +A+L+ PG NIL+PRPGF +Y+  A    IEV+ ++L
Sbjct: 114 AP--LEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNL 171
Query: 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
           LP+K WE+DL  +E L D+ T  L++ NP NPCG+V+S +HLQK+   A +    ++ADE
Sbjct: 172 LPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADE 231
Query: 214 VYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273
           +YG +VF D  + P+    + VPIL+ G L+KRW+VPGWRLGW +  D   +F       
Sbjct: 232 IYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDG 291
Query: 274 RMKKYFDILGDPATFIQVCIMYGCLSTIM----QIMIHG--NFLENFAGSCVPSYKLIPE 327
            +K    ILG P T +Q     G L +I+        H   +FL++ A  C  +   IP 
Sbjct: 292 LVKLSQRILG-PCTIVQ-----GALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPG 345
Query: 328 LINFKSTGS 336
           L   + +G+
Sbjct: 346 LRPVRPSGA 354

>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From Trypanosoma Cruzi Length = 416

Iteration: 1
 Score =  162 bits (410), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 148/303 (48%), Gaps = 20/303 (6%)
Query: 35  KKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
           K +I L++GDPT+                   S++ NGY PT G P  R A+A +     
Sbjct: 33  KPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSF 92
Query: 95  PYK------LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEV 148
            +K      +  ++V + SG +  I +A+  +   G   L+P+PGFP YE       I +
Sbjct: 93  VHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGM 152
Query: 149 RHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTL 208
             ++  P+  WE DLD+I  L D  T  L++ NP NPCG+ +S +H++ +   A +L+  
Sbjct: 153 HFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLP 212
Query: 209 VIADEVYGHLVFGDK----PFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG 264
           + +DE+Y  +VF  K     F  +  F +TVP + LG  +   +VPGWRLGW +  DP G
Sbjct: 213 LFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAXNLVVPGWRLGWLLYVDPHG 272
Query: 265 MFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLST--------IMQIMIHGNFLENFAG 316
               P  +E +K+   ++  P T +Q  +    L+T        + +I     +L N  G
Sbjct: 273 --NGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIG 330
Query: 317 SCV 319
            C+
Sbjct: 331 ECI 333

>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus Pfu-1397077-001 Length = 406

Iteration: 1
 Score =  127 bits (318), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 138/302 (45%), Gaps = 11/302 (3%)
Query: 12  GSIITIKGMLSL-------LMQSVDDEKNEKKVISLAMGDPTVHSCFXXXXXXXXXXXXX 64
           GSI   K  LS+       ++ + + EK   KVI L +GDP                   
Sbjct: 8   GSIRASKRALSVEYAIRDVVLPARELEKKGIKVIRLNIGDPVKFDF--QPPEHMKEAYCK 65
Query: 65  XXSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPG 124
              E  N Y  + GLP  R+AI E   R     +TP+DV VT+  T+A+ +    L  PG
Sbjct: 66  AIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPG 125
Query: 125 ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGN 184
             IL+P P +P Y     F   +   +  + ++ W+ D+DDI       T A+ +INP N
Sbjct: 126 DEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNN 185
Query: 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS 244
           P G +Y  + L+++   A + +  VI+DE+Y  + +  +   P G     VP++ +  LS
Sbjct: 186 PTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISP-GSLTKDVPVIVMNGLS 244
Query: 245 KRWIVPGWRLGWFVTTDPCGMFRKPK-VVERMKKYFDILGDPATFIQVCIMYGCLSTIMQ 303
           K +   GWRLG+    DP     + +  ++R+ +       PA F  +  + G +  + +
Sbjct: 245 KVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKE 304
Query: 304 IM 305
            M
Sbjct: 305 YM 306

>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase Length = 381

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/195 (34%), Positives = 97/195 (49%), Gaps = 21/195 (10%)
Query: 71  NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP 130
           + YAP AGLP  R A+AE       + + P  V VTSG T+A+ V +  L  PG  +++ 
Sbjct: 55  DQYAPPAGLPALREALAEE------FAVEPESVVVTSGATEALYVLLQSLVGPGDEVVVL 108
Query: 131 RPGFPIYELSAAFRHIEVR--HFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGN 188
            P F +Y   A     + R    DL P+ G+ +DL  +E      T AL++  P NP G 
Sbjct: 109 EPFFDVYLPDAFLAGAKARLVRLDLTPE-GFRLDLSALEKALTPRTRALLLNTPMNPTGL 167
Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP-----FVPMGVFGSTVPILTLGSL 243
           V+  + L+ +A  A      +I+DEVY  L +G++P     F P   F       T+GS 
Sbjct: 168 VFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTF-------TVGSA 220
Query: 244 SKRWIVPGWRLGWFV 258
            KR    G+R+GW V
Sbjct: 221 GKRLEATGYRVGWIV 235

>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra Mutant 2 Complexed With Tryptophan Length = 385

Iteration: 1
 Score = 91.7 bits (226), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 98/187 (52%), Gaps = 8/187 (4%)
Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI-DVAMALLSRPGANILLPR 131
           YAP AG+P  R A+AE   R+    +TP +  VT G +QA+ ++  A+L  PG  +++  
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILD-PGDEVIVLS 122
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191
           P +  Y     F    V   + LP++G+  D + +       T ALV+ +P NP G VY 
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIV 249
            + L+ LA  A +    +++DE+Y HL++  + F P    G   P   LT+   +K + +
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAM 238
Query: 250 PGWRLGW 256
            GWR+G+
Sbjct: 239 TGWRIGY 245

>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single Mutant 1 Length = 385

Iteration: 1
 Score = 91.3 bits (225), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 98/187 (52%), Gaps = 8/187 (4%)
Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI-DVAMALLSRPGANILLPR 131
           YAP AG+P  R A+AE   R+    +TP +  VT G +QA+ ++  A+L  PG  +++  
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILD-PGDEVIVLS 122
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191
           P +  Y     F    V   + LP++G+  D + +       T ALV+ +P NP G VY 
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIV 249
            + L+ LA  A +    +++DE+Y HL++  + F P    G   P   LT+   +K + +
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAM 238
Query: 250 PGWRLGW 256
            GWR+G+
Sbjct: 239 TGWRIGY 245

>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double Mutant 1 Complexed With Aspartate Length = 385

Iteration: 1
 Score = 91.3 bits (225), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 98/187 (52%), Gaps = 8/187 (4%)
Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI-DVAMALLSRPGANILLPR 131
           YAP AG+P  R A+AE   R+    +TP +  VT G +QA+ ++  A+L  PG  +++  
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILD-PGDEVIVLS 122
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191
           P +  Y     F    V   + LP++G+  D + +       T ALV+ +P NP G VY 
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIV 249
            + L+ LA  A +    +++DE+Y HL++  + F P    G   P   LT+   +K + +
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAM 238
Query: 250 PGWRLGW 256
            GWR+G+
Sbjct: 239 TGWRIGY 245

>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra Mutant 1 Length = 385

Iteration: 1
 Score = 91.3 bits (225), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 98/187 (52%), Gaps = 8/187 (4%)
Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI-DVAMALLSRPGANILLPR 131
           YAP AG+P  R A+AE   R+    +TP +  VT G +QA+ ++  A+L  PG  +++  
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILD-PGDEVIVLS 122
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191
           P +  Y     F    V   + LP++G+  D + +       T ALV+ +P NP G VY 
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIV 249
            + L+ LA  A +    +++DE+Y HL++  + F P    G   P   LT+   +K + +
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAM 238
Query: 250 PGWRLGW 256
            GWR+G+
Sbjct: 239 TGWRIGY 245

>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With Maleate Length = 385

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 97/187 (51%), Gaps = 8/187 (4%)
Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI-DVAMALLSRPGANILLPR 131
           YAP AG+P  R A+AE   R+    +TP +  VT G  QA+ ++  A+L  PG  +++  
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILD-PGDEVIVLS 122
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191
           P +  Y     F    V   + LP++G+  D + +       T ALV+ +P NP G VY 
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIV 249
            + L+ LA  A +    +++DE+Y HL++  + F P    G   P   LT+   +K + +
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAM 238
Query: 250 PGWRLGW 256
            GWR+G+
Sbjct: 239 TGWRIGY 245

>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus Length = 382

Iteration: 1
 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 8/187 (4%)
Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI-DVAMALLSRPGANILLPR 131
           YAP AG+P  R A+AE   R+    +TP +  VT G  QA+ ++  A+L  PG  +++  
Sbjct: 64  YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILD-PGDEVIVLS 122
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191
           P +  Y     F    V   + LP++G+  D + +       T ALV+ +P NP G VY 
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYP 182
Query: 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIV 249
            + L+ LA  A +    +++DE+Y HL++  + F P    G   P   LT+   +  + +
Sbjct: 183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAXAFAM 238
Query: 250 PGWRLGW 256
            GWR+G+
Sbjct: 239 TGWRIGY 245

>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form Length = 389

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 123/266 (46%), Gaps = 30/266 (11%)
Query: 35  KKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
           K VISL +G+P   +                  +    Y P  GL   R AIAE L +  
Sbjct: 26  KDVISLGIGEPDFDTP-----QHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQN 80
Query: 95  PYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE---LSAAFRHIEVRH 150
             +  P  ++ V  G  QA  + ++   + G  +L+P P F  Y    + A  + +EV  
Sbjct: 81  GIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPT 140
Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
           ++   +  + +++D+++      T AL+I +P NP G V + + L+++A+   +   +VI
Sbjct: 141 YE---EDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVI 197
Query: 211 ADEVYGHLVFGDKPFVPM----GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF 266
           +DEVY H ++ D     +    G+F  T+   T+   SK + + GWRLG FV        
Sbjct: 198 SDEVYEHFIYDDARHYSIASLDGMFERTI---TVNGFSKTFAMTGWRLG-FVAAPSW--- 250
Query: 267 RKPKVVERMKKYFDILGD--PATFIQ 290
               ++ERM K F +     P TFIQ
Sbjct: 251 ----IIERMVK-FQMYNATCPVTFIQ 271

>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From Pyrococcus Horikoshii Ot3 Length = 388

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 123/266 (46%), Gaps = 30/266 (11%)
Query: 35  KKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
           K VISL +G+P   +                  +    Y P  GL   R AIAE L +  
Sbjct: 25  KDVISLGIGEPDFDTP-----QHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQN 79
Query: 95  PYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE---LSAAFRHIEVRH 150
             +  P  ++ V  G  QA  + ++   + G  +L+P P F  Y    + A  + +EV  
Sbjct: 80  GIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPT 139
Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
           ++   +  + +++D+++      T AL+I +P NP G V + + L+++A+   +   +VI
Sbjct: 140 YE---EDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVI 196
Query: 211 ADEVYGHLVFGDKPFVPM----GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF 266
           +DEVY H ++ D     +    G+F  T+   T+   SK + + GWRLG FV        
Sbjct: 197 SDEVYEHFIYDDARHYSIASLDGMFERTI---TVNGFSKTFAMTGWRLG-FVAAPSW--- 249
Query: 267 RKPKVVERMKKYFDILGD--PATFIQ 290
               ++ERM K F +     P TFIQ
Sbjct: 250 ----IIERMVK-FQMYNATCPVTFIQ 270

>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698) From Thermotoga Maritima At 2.50 A Resolution Length = 409

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 95/194 (48%), Gaps = 13/194 (6%)
Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
           Y+ +AG+   R A A Y  R     + P +V VT+G ++AI  + A+++ PG  IL+  P
Sbjct: 75  YSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEP 134
Query: 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192
            +  Y   A    +++       ++G+ +   ++ES  ++ T  +V+ NP NP G VY  
Sbjct: 135 FYANYNAFAKIAGVKLIPVTRRXEEGFAIP-QNLESFINERTKGIVLSNPCNPTGVVYGK 193
Query: 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI-----LTLGSLSKRW 247
              + L E A +    +I DEVY  +VF        G F S + I     + + S+S ++
Sbjct: 194 DEXRYLVEIAERHGLFLIVDEVYSEIVF-------RGEFASALSIESDKVVVIDSVSXKF 246
Query: 248 IVPGWRLGWFVTTD 261
              G R+G  +T +
Sbjct: 247 SACGARVGCLITRN 260

>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of N-Succinyldiaminopimelate Aminotransferase From Mycobacterium Tuberculosis Length = 411

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 86/185 (46%), Gaps = 7/185 (3%)
Query: 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD-KGW 159
            +V VT G T+AI  A+  L  PG+ +LL  P +  Y    A          L+PD +G+
Sbjct: 87  TEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGF 146
Query: 160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV 219
            +D D +       T AL+I +P NP G V S   L  +AE A     +VI DEVY HLV
Sbjct: 147 ALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLV 206
Query: 220 FGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY 278
           F     +P+  F G     +T+ S +  +   GW++GW      CG       V   K+Y
Sbjct: 207 FDHARHLPLAGFDGMAERTITISSAAXMFNCTGWKIGW-----ACGPAELIAGVRAAKQY 261
Query: 279 FDILG 283
              +G
Sbjct: 262 LSYVG 266

>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255) From Thermotoga Maritima At 1.90 A Resolution Length = 389

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 89/192 (46%)
Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
           Y    G+   R  IA+ +       ++P+ V VT+G  QA+  A   L  PG  +++  P
Sbjct: 74  YTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSP 133
Query: 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY 192
            +  Y          V   +    K ++  L+++E L    T A++I +P NP G VY  
Sbjct: 134 VWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRR 193
Query: 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW 252
           + L+ L   A K    +I+DEVY  LV+ D+    + V      I+ +   SK   + GW
Sbjct: 194 EFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGW 253
Query: 253 RLGWFVTTDPCG 264
           R+G+ ++++   
Sbjct: 254 RVGYLISSEKVA 265

>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine Aminotransferase From Saccharomyces Cerevisiae Length = 447

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 13/203 (6%)
Query: 71  NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP 130
           N Y+PT G P    ++ +  S     +L   +V VT+G  + I   +  L   G  +++ 
Sbjct: 89  NQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVF 148
Query: 131 RPGFPIYELSAAFRHIEVRHFDLLPDKG----------WEVDLDDIESLADQNTVALVII 180
            P F  Y  +      +V +  + P K           W +D +  E      T A++I 
Sbjct: 149 EPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIIN 208
Query: 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240
            P NP G V++ + L  L     K   ++I+DEVY HL F D  F  +      +  LTL
Sbjct: 209 TPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDS-FTRIATLSPEIGQLTL 267
Query: 241 --GSLSKRWIVPGWRLGWFVTTD 261
             GS    +   GWR+GW ++ +
Sbjct: 268 TVGSAGXSFAATGWRIGWVLSLN 290

>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum Vulgare Length = 500

Iteration: 1
 Score = 74.3 bits (181), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 16/205 (7%)
Query: 72  GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN-ILLP 130
            Y+ + G+   R AIA  ++    +    +D+F+T G +  + + M LL R   + IL+P
Sbjct: 129 AYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVP 188
Query: 131 RPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIE-SLADQ-----NTVALVIINPGN 184
            P +P+Y  S A     +  + L    GW ++  D++  L D      N  ALV+INPGN
Sbjct: 189 IPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGN 248
Query: 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD--------KPFVPMGVFGSTVP 236
           P G V + ++   + +       +++ADEVY   ++ D        K    +G     +P
Sbjct: 249 PTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLP 308
Query: 237 ILTLGSLSKRWIVP-GWRLGWFVTT 260
           +++  S+SK +    G R G+F  T
Sbjct: 309 LVSYQSVSKGYYGECGKRGGYFEIT 333

>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii In Complex With Kynurenine Length = 410

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 102/222 (45%), Gaps = 13/222 (5%)
Query: 68  EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPND-VFVTSGCTQAIDVAMALLSRPGAN 126
           +  N Y    G P   +A++    +    ++ PN+ + V  G   ++  ++  L  PG  
Sbjct: 52  DNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDE 111
Query: 127 ILLPRPGFPIYE----LSAA---FRHIEVRHFDLLP--DKGWEVDLDDIESLADQNTVAL 177
           +++  P +  YE    ++ A   F  +  +  D +      W  D  ++ES     T A+
Sbjct: 112 VIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAI 171
Query: 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVP 236
           ++  P NP G VY+ Q LQ +A+   K  TL I+DEVY  LV+     V +    G    
Sbjct: 172 ILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWER 231
Query: 237 ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY 278
            +T+GS  K + V GW+LGW  +  P  + +  + V++   Y
Sbjct: 232 TITIGSAGKTFSVTGWKLGW--SIGPAHLIKHLQTVQQNSFY 271

>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase Length = 429

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 71  NGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILL 129
           N Y    G P   +A+++  S+ +   + P  +V VT G  +A+   +      G  +++
Sbjct: 71  NQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVII 130
Query: 130 PRPGFPIYELSAAFRHIEVRHFDLLPDK--------GWEVDLDDIESLADQNTVALVIIN 181
             P F  YE          R   L P+K         W +D +++E+L ++ T  ++I  
Sbjct: 131 IEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINT 190
Query: 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP----- 236
           P NP G V     L+ +A    K   L ++DEVY H+VF  +PF  + +   T+P     
Sbjct: 191 PHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVF--EPFEHIRI--CTLPGMWER 246
Query: 237 ILTLGSLSKRWIVPGWRLGW 256
            +T+GS  K + + GW++GW
Sbjct: 247 TITIGSAGKTFSLTGWKIGW 266

>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I In Pmp Form Length = 422

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 71  NGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILL 129
           N Y  T G P   + +A +    L  ++ P  +V VT G   A+  A   L   G  +++
Sbjct: 61  NQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVII 120
Query: 130 PRPGFPIYE---LSAAFRHI-------EVRHFDLLPDKGWEVDLDDIESLADQNTVALVI 179
             P F  YE   + A  R +        +++ +L     W++D  ++       T ALV+
Sbjct: 121 IEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVL 180
Query: 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPIL 238
             P NP G V+S + L+ +A    +   + I DEVY  +V+     + +    G     L
Sbjct: 181 NTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTL 240
Query: 239 TLGSLSKRWIVPGWRLGWFVTTD 261
           T+GS  K +   GW++GW +  D
Sbjct: 241 TIGSAGKTFSATGWKVGWVLGPD 263

>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase Length = 429

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 18/200 (9%)
Query: 71  NGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILL 129
           N Y    G P   +A+++  S+ +   + P  +V VT G  +A+   +      G  +++
Sbjct: 71  NQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVII 130
Query: 130 PRPGFPIYELSAAFRHIEVRHFDLLPDK--------GWEVDLDDIESLADQNTVALVIIN 181
             P F  YE          R   L P+K         W +D +++E+L ++ T  ++I  
Sbjct: 131 IEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINT 190
Query: 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP----- 236
           P NP G V     L+ +A    K   L ++DEVY H+VF  +PF  + +   T+P     
Sbjct: 191 PHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVF--EPFEHIRI--CTLPGMWER 246
Query: 237 ILTLGSLSKRWIVPGWRLGW 256
            +T+GS    + + GW++GW
Sbjct: 247 TITIGSAGXTFSLTGWKIGW 266

>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii, Plp-Bound Form Length = 410

Iteration: 1
 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 13/222 (5%)
Query: 68  EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPND-VFVTSGCTQAIDVAMALLSRPGAN 126
           +  N Y    G P   +A++    +    ++ PN+ + V  G   ++  ++  L  PG  
Sbjct: 52  DNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDE 111
Query: 127 ILLPRPGFPIYE----LSAA---FRHIEVRHFDLLP--DKGWEVDLDDIESLADQNTVAL 177
           +++  P +  YE    ++ A   F  +  +  D +      W  D  ++ES     T A+
Sbjct: 112 VIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAI 171
Query: 178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVP 236
           ++  P NP G VY+ Q LQ +A+   K  TL I+DEVY  LV+     V +    G    
Sbjct: 172 ILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWER 231
Query: 237 ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY 278
            +T+GS    + V GW+LGW  +  P  + +  + V++   Y
Sbjct: 232 TITIGSAGXTFSVTGWKLGW--SIGPAHLIKHLQTVQQNSFY 271

>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia Coli Identify A Methionine Aminotransferase Function. Length = 386

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 3/194 (1%)
Query: 71  NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILL 129
           N YAP  G+   R AIA+   R   Y+   + D+ VT+G T+A+  A+  L R G  ++ 
Sbjct: 61  NQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVIC 120
Query: 130 PRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV 189
             P +  Y  + A     V+   L P   + VD  +  +L  + T  +++  P NP   V
Sbjct: 121 FDPSYDSYAPAIALSGGIVKRMALQPPH-FRVDWQEFAALLSERTRLVILNTPHNPSATV 179
Query: 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRWI 248
           +       L +     +  VI+DEVY H+ F  +    +          + + S  K + 
Sbjct: 180 WQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYH 239
Query: 249 VPGWRLGWFVTTDP 262
           + GW++G+ V   P
Sbjct: 240 MTGWKVGYCVAPAP 253

>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum Length = 388

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 10/196 (5%)
Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
           Y P AG P  R AIA+ L RD       +++ VT+G  Q+I   M  +  PG  +++P P
Sbjct: 63  YGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAP 122
Query: 133 GFPIY-ELSAAFRHIEVRHFDLLP---DKGWEVDLDDIESLADQNTVALVIINPGNPCGN 188
            +  Y E+        V    +LP   +  ++V  + I       T  LV   P NP G 
Sbjct: 123 FWVSYPEMVKLAEGTPV----ILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGM 178
Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV--PILTLGSLSKR 246
           VY+   ++ +A+ A +    V++DE+Y  +++ D   + +G          +     +K 
Sbjct: 179 VYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKT 238
Query: 247 WIVPGWRLGWFVTTDP 262
           + + GWR+G+     P
Sbjct: 239 YAMTGWRVGFLAGPVP 254

>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With Glycerol Length = 422

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 12/203 (5%)
Query: 71  NGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILL 129
           N Y  T G P   + +A +    L  ++ P  +V VT G   A+  A   L   G  +++
Sbjct: 61  NQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVII 120
Query: 130 PRPGFPIYE---LSAAFRHI-------EVRHFDLLPDKGWEVDLDDIESLADQNTVALVI 179
             P F  YE   + A  R +        +++ +L     W++D  ++       T ALV+
Sbjct: 121 IEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVL 180
Query: 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPIL 238
             P NP G V+S + L+ +A    +   + I DEVY  +V+     + +    G     L
Sbjct: 181 NTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTL 240
Query: 239 TLGSLSKRWIVPGWRLGWFVTTD 261
           T+GS    +   GW++GW +  D
Sbjct: 241 TIGSAGXTFSATGWKVGWVLGPD 263

>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I Length = 422

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 12/203 (5%)
Query: 71  NGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILL 129
           N Y  T G P   + +A +    L  ++ P  +V VT G   A+  A   L   G  +++
Sbjct: 61  NQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVII 120
Query: 130 PRPGFPIYE---LSAAFRHI-------EVRHFDLLPDKGWEVDLDDIESLADQNTVALVI 179
             P F  YE   + A  R +        +++ +L     W++D  ++       T ALV+
Sbjct: 121 IEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVL 180
Query: 180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPIL 238
             P NP G V+S + L+ +A    +   + I DEVY  +V+     + +    G     L
Sbjct: 181 NTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTL 240
Query: 239 TLGSLSKRWIVPGWRLGWFVTTD 261
           T+GS    +   GW++GW +  D
Sbjct: 241 TIGSAGXTFSATGWKVGWVLGPD 263

>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine Aminotransferase In Complex With Plp Length = 448

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 18/247 (7%)
Query: 37  VISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY 96
           +ISLA G P   +                 ++K   Y  T G    R  + ++L +   Y
Sbjct: 78  IISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKR--Y 135
Query: 97  KLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA--AFRHIEVRHFDL 153
            ++  ND+ +TSG  QA+D+   +   PG  +++  P +    L+A  AF   E ++  +
Sbjct: 136 GISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTY----LAALQAFNFYEPQYIQI 191
Query: 154 -LPDKGWEVD-----LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207
            L D+G +V+     L +++S   +  V   +    NP G   +    + L E A++   
Sbjct: 192 PLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDF 251
Query: 208 LVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR 267
           +V+ D+ YG L +   P   +    +   ++ LG+ SK  + PG+R+GW V  DP G+ R
Sbjct: 252 IVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSK-ILAPGFRIGWMV-GDP-GIIR 308
Query: 268 KPKVVER 274
           K ++ ++
Sbjct: 309 KMEIAKQ 315

>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803) From Eubacterium Rectale At 2.10 A Resolution Length = 398

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 28/207 (13%)
Query: 71  NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAM-ALLSRPGANILL 129
           +GY    G   TR AIAE+L+         ++++ T G   ++ +   AL S      + 
Sbjct: 70  HGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYXTXGAAASLSICFRALTSDAYDEFIT 129
Query: 130 PRPGFPIYEL---SAAFRHIEV----RHFDLLPDKGWEVDLDDIESLADQNTVALVIINP 182
             P FP Y++   +A  R +EV     HF        ++D D +E   + +T  ++I +P
Sbjct: 130 IAPYFPEYKVFVNAAGARLVEVPADTEHF--------QIDFDALEERINAHTRGVIINSP 181
Query: 183 GNPCGNVYSYQHLQKLAETANKLKT------LVIADEVYGHLVF-GDK-PFVPMGVFGST 234
            NP G VYS + ++KL++   K          +IADE Y  +V+ G K PFV    + +T
Sbjct: 182 NNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFV-TKYYDNT 240
Query: 235 VPILTLGSLSKRWIVPGWRLGWFVTTD 261
              L   S SK   +PG R+G+ +  D
Sbjct: 241 ---LVCYSYSKSLSLPGERIGYVLVPD 264

>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From Pyrococcus Horikoshii Ot3 Length = 403

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 18/247 (7%)
Query: 37  VISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY 96
           +ISLA G P   +                 ++K   Y  T G    R  + ++L +   Y
Sbjct: 33  IISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKR--Y 90
Query: 97  KLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA--AFRHIEVRHFDL 153
            ++  ND+ +TSG  QA+D+   +   PG  +++  P +    L+A  AF   E ++  +
Sbjct: 91  GISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTY----LAALQAFNFYEPQYIQI 146
Query: 154 -LPDKGWEVD-----LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207
            L D+G +V+     L +++S   +  V   +    NP G   +    + L E A++   
Sbjct: 147 PLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDF 206
Query: 208 LVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR 267
           +V+ D+ YG L +   P   +    +   ++ LG+ SK  + PG+R+GW V  DP G+ R
Sbjct: 207 IVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSK-ILAPGFRIGWMV-GDP-GIIR 263
Query: 268 KPKVVER 274
           K ++ ++
Sbjct: 264 KMEIAKQ 270

>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate Aminotransferase Length = 407

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 110/255 (43%), Gaps = 20/255 (7%)
Query: 17  IKG--MLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYA 74
           IKG  +  ++ ++ + +K   K+ISLA GDP                       K   Y 
Sbjct: 14  IKGSALADVMKKASELQKKGVKLISLAAGDPD-PELIPRAVLGEIAKEVLEKEPKSVMYT 72
Query: 75  PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGF 134
           P  G+P  R  +A +L +    +++P ++ +T G T A+D+   +L  PG  ++   P +
Sbjct: 73  PANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSY 132
Query: 135 -----PIYELSAAFRHIEVRHFDLLPDKGWEVDL--DDIESL-ADQNTVALVIINP--GN 184
                   +L A    + V       + G  VDL  + I+ L A    V L+   P   N
Sbjct: 133 INTLLAFEQLGAKIEGVPV------DNDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQN 186
Query: 185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS 244
           P G   S +  + L E A+K   L+I D  Y  + +     VP+    +   ++  G+LS
Sbjct: 187 PMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLS 246
Query: 245 KRWIVPGWRLGWFVT 259
           K  +  G+R+GW + 
Sbjct: 247 K-VLGTGFRIGWIIA 260

>pdb|1WST|A Chain A, Crystal Structure Of Multiple Substrate Aminotransferase (Msat) From Thermococcus Profundus Length = 417

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 13/228 (5%)
Query: 37  VISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY 96
           VISLA G P   +                 ++K   Y  T G    R A+A ++ +    
Sbjct: 43  VISLAGGLPAPETFPVETIKKIAVEVLEEHADKALQYGTTKGFTPLRLALARWMEKRYDI 102
Query: 97  KLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA--AFRHIEVRHFDL- 153
            ++  ++   +G  QA+D+   +   PG  I++  P +    L+A  AF++ +     + 
Sbjct: 103 PMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTY----LAAIQAFKYYDPEFISIP 158
Query: 154 LPDKGWEVDLDDIESLADQNT-----VALVIINPGNPCGNVYSYQHLQKLAETANKLKTL 208
           L DKG  VDL + +    +       +   +    NP G   S    +KL E AN+   L
Sbjct: 159 LDDKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFL 218
Query: 209 VIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW 256
           ++ D  Y  L +  +P  P+  F     ++ LG+ SK  + PG+R+GW
Sbjct: 219 IVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSK-ILAPGFRIGW 265

>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From Pseudomonas Aeruginosa Length = 412

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 13/218 (5%)
Query: 68  EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGAN 126
           E  +GY+ + G+P  RRAI+ +       ++ P ++  VT G  + +   M      G  
Sbjct: 66  EDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDT 125
Query: 127 ILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC 186
           IL+P P +PI+   A     +VR   L+P   +  +L+     +      +++  P NP 
Sbjct: 126 ILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPT 185
Query: 187 GNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF-GDKPFVPMGVFGSTVPILTLGSLSK 245
                    +++   A +   +V+ D  Y  +V+ G K    M V G+    +   +LSK
Sbjct: 186 AQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSK 245
Query: 246 RWIVPGWRLGWFVTTDPCGMFRKPKVVE---RMKKYFD 280
            + + GWR+G+ V          P++V    R+K Y D
Sbjct: 246 SYNMAGWRIGFMVGN--------PELVSALARIKSYHD 275

>pdb|3F6T|A Chain A, Crystal Structure Of Aspartate Aminotransferase (E.C. 2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus Ncfm At 2.15 A Resolution Length = 533

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 93/221 (42%), Gaps = 28/221 (12%)
Query: 86  IAEYLSRDLPYK----LTPNDVFVTSGCTQAIDVAMALLS-----RPGANILLPRPGFPI 136
           I  Y  ++L YK        D+F T G T AI  A   L+     + G  I +  P F  
Sbjct: 146 IINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTP 205
Query: 137 YELSAAFRHIEVRHFDL--LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH 194
           Y      +  E+   DL       WE++ ++IE L D +  AL+++NP NP    +    
Sbjct: 206 YLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNA 265
Query: 195 LQKLAETANKL-KTLVIADEVYGHLVFGDKPFVP-MGVFGSTVPILT--LGSLSKRWIVP 250
           L  + +   K  K  +I+DEVYG        FVP      S VP  T  + S S  +   
Sbjct: 266 LNAIKQAVEKNPKLXIISDEVYG-------AFVPNFKSIYSVVPYNTXLVYSYSXLFGCT 318
Query: 251 GWRLGWF------VTTDPCGMFRKPKVVERMKKYFDILGDP 285
           GWRLG        V  D      K ++ +  K+Y  ++ DP
Sbjct: 319 GWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDP 359

>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp Length = 498

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 73  YAPTAGLPLTRRAIAEYLSR-DLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN----I 127
           Y+ + G+   R  +A Y++R D      P+++++T+G +  I   + +L   G      +
Sbjct: 125 YSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGV 184
Query: 128 LLPRPGFPIYE-LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-----NTVALVIIN 181
           ++P P +P+Y  + +    I+V ++ L  +  W ++++++     +     +   L IIN
Sbjct: 185 MIPIPQYPLYSAVISELDAIQVNYY-LDEENCWALNVNELRRAVQEAKDHCDPKVLCIIN 243
Query: 182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG--------DKPFVPMG-VFG 232
           PGNP G V S + ++ +   A + K  ++ADEVY   V+          K    MG  + 
Sbjct: 244 PGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYS 303
Query: 233 STVPILTLGSLSKRWIVP-GWRLGWF 257
           S V + +  S SK ++   G+R G+ 
Sbjct: 304 SNVELASFHSTSKGYMGECGYRGGYM 329

>pdb|3FDB|A Chain A, Crystal Structure Of A Putative Plp-Dependent Beta-Cystathionase (Aecd, Dip1736) From Corynebacterium Diphtheriae At 1.99 A Resolution Length = 377

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 90/194 (46%), Gaps = 11/194 (5%)
Query: 72  GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPR 131
           GY P   L    +A AE+ +    Y+  P  +F      + + +A+   +   + +++P 
Sbjct: 55  GYQPDGSL--LSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFTPAQSKVIVPT 112
Query: 132 PGFP--IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV 189
           P +P   + LSA  R        +  D    ++L D+E        ++++ NP NP G V
Sbjct: 113 PAYPPFFHLLSATQRE------GIFIDATGGINLHDVEKGFQAGARSILLCNPYNPLGXV 166
Query: 190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPI-LTLGSLSKRWI 248
           ++ + L +L + A++    V+ DE++  LVF  +  V  GV  +   + +T+ + S  W 
Sbjct: 167 FAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSXAWN 226
Query: 249 VPGWRLGWFVTTDP 262
           + G +    + ++P
Sbjct: 227 IAGLKCAQIIFSNP 240

>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase (Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70 A Resolution Length = 375

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
           Y    G P  ++++++     L   + P  +  T+G T A  + +  L  PG +++   P
Sbjct: 59  YGWIEGSPAFKKSVSQ-----LYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYP 113
Query: 133 GFP-IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191
            +  +Y++  +    EV  + +  + GW  DL+ +  L    T  + I N  NP G V  
Sbjct: 114 TYQQLYDIPKSL-GAEVDLWQIEEENGWLPDLEKLRQLIRPTTKXICINNANNPTGAVXD 172
Query: 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG 251
             +L++L E A+++   +++DEVY      D P + + V+   + +    SLS  + +PG
Sbjct: 173 RTYLEELVEIASEVGAYILSDEVYRSFSELDVPSI-IEVYDKGIAV---NSLSXTYSLPG 228
Query: 252 WRLGW 256
            R+GW
Sbjct: 229 IRIGW 233

>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus Anginosus: Internal Aldimine Form Length = 392

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/198 (21%), Positives = 91/198 (45%), Gaps = 12/198 (6%)
Query: 84  RAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF 143
           +A+ ++   +  Y     D+    G   AI +A+   ++ G  +L+  P +P +  S   
Sbjct: 73  QAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRL 132
Query: 144 RHIEVRHFDLLPDKG-WEVDLDDIESLADQNTVALVII-NPGNPCGNVYSYQHLQKLAET 201
            + ++    L  + G +++D + +E+   +N V L ++ NP NP G V+  + L+++   
Sbjct: 133 NNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHL 192
Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-----ILTLGSLSKRWIVPGWRLGW 256
             K   ++++DE++  L       V    F +  P      L L S +K + + G +  +
Sbjct: 193 CQKHHVILVSDEIHQDLTLFGHEHVS---FNTVSPDFKDFALVLSSATKTFNIAGTKNSY 249
Query: 257 FVTTDP--CGMFRKPKVV 272
            +  +P  C  F+  ++V
Sbjct: 250 AIIENPTLCAQFKHQQLV 267

>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii Reveals Its Similarity In The Active Site To Kynurenine Aminotransferases Length = 370

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/238 (21%), Positives = 100/238 (42%), Gaps = 19/238 (7%)
Query: 24  LMQSVDDEKNEKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTR 83
           L Q ++ E   KKVI L +G+P  ++                  E    Y  + G+   R
Sbjct: 20  LAQKLESEG--KKVIHLEIGEPDFNT-----PKPIVDEGIKSLKEGKTHYTDSRGILELR 72
Query: 84  RAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF 143
             I+E         + P+++ +T G +  +  A++ +   G  +L+  P +P Y+    F
Sbjct: 73  EKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRF 132
Query: 144 RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETAN 203
              +    D          ++ +E      T A++I +P NP G V      +++ E A 
Sbjct: 133 LGAKPVFCDFT--------VESLEEALSDKTKAIIINSPSNPLGEVID----REIYEFAY 180
Query: 204 KLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261
           +    +I+DE+Y  LV+  K +  +    +    + +   S  + + GWR+G+ ++ D
Sbjct: 181 ENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSXLYAMTGWRIGYVISND 238

>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent Aminotransferase (Lbul_1103) From Lactobacillus Delbrueckii Subsp. At 1.61 A Resolution Length = 391

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/276 (22%), Positives = 117/276 (42%), Gaps = 32/276 (11%)
Query: 84  RAIAEYLSRDLPYKLTPNDVFV--TSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA 141
           +A+A++   ++ ++  P + +    SG   AI   +   + PG  IL+  P +  +    
Sbjct: 69  KAVADW--EEIEHRARPKEDWCVFASGVVPAISAXVRQFTSPGDQILVQEPVYNXFYSVI 126
Query: 142 AFRHIEVRHFDLL-PDKGWEVDLDDIES-LADQNTVALVIINPGNPCGNVYSYQHLQKLA 199
                 V   DL+  +  + V+  D+E  LA  +    V  NP NP G  +S + ++++A
Sbjct: 127 EGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRXXVFCNPHNPIGYAWSEEEVKRIA 186
Query: 200 ETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV----PGWRLG 255
           E   K + L+I+DE++G LV  D+   P           T+   +K W+V    P     
Sbjct: 187 ELCAKHQVLLISDEIHGDLVLTDEDITPA---------FTVDWDAKNWVVSLISPSXTFN 237
Query: 256 WFVTTDPCGMFRKPKVVERMKKYFDI--LGDPATFIQVCIM------YGCLSTIMQIMIH 307
                  C +   P +  R ++ F +  +G+P        +      +  L  + Q++  
Sbjct: 238 LAALHAACAIIPNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVL-- 295
Query: 308 GNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL 343
               +NFA +     K +PE+    S  S L ++D+
Sbjct: 296 ---RDNFAYAREFLAKEVPEVKVLDSNASYLAWVDI 328

>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp Length = 428

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 85/196 (43%), Gaps = 19/196 (9%)
Query: 78  GLPLTRRAIAEYL--SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
           GLP  R+AIA+++  +R    +  P  V +  G T A +  +  L+ PG   L+P P +P
Sbjct: 84  GLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYP 143
Query: 136 IYELSAAFR--------HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG 187
            +     +R        H E  +   +  K  +   ++ +  ++     L++ NP NP G
Sbjct: 144 AFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQK-SNIKVKGLILTNPSNPLG 202
Query: 188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG--------VFGSTVPILT 239
                  L+ +    N+    ++ DE+Y   VF    FV +          + +   +  
Sbjct: 203 TTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHI 262
Query: 240 LGSLSKRWIVPGWRLG 255
           + SLSK   +PG+R+G
Sbjct: 263 VYSLSKDMGLPGFRVG 278

>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana Length = 456

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 89/238 (37%), Gaps = 20/238 (8%)
Query: 36  KVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRDLP 95
           ++ISL  GD T                     E + GY    G    R+AIAE   RDL 
Sbjct: 71  QLISLGTGDTTEPIPEQITSHMSNFAHGLSTVEGYRGYGLEQGNKTLRKAIAETFYRDLH 130
Query: 96  YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF------------ 143
            K   N+VFV+ G    I   + LL      I +  P FP Y  S+              
Sbjct: 131 VK--SNEVFVSDGAQSDIS-RLQLLLGSNVTIAVQDPTFPAYIDSSVIIGQTGHFHEKTK 187
Query: 144 RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETAN 203
           ++  V +    P+  +  DL          T  +   +P NP G V S + L +L + A 
Sbjct: 188 KYQNVVYMPCGPNNSFFPDL-----AMTPRTDVIFFCSPNNPTGYVASRKQLHQLVDFAK 242
Query: 204 KLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261
              +++I D  Y   +    P     + G+    + + S SK     G RLGW +  D
Sbjct: 243 TNGSIIIFDSAYAAFIEDGSPRSIYEIPGAREVAIEVSSFSKFAGFTGVRLGWSIIPD 300

>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L- Aminoethoxyvinylglycine Length = 435

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 78  GLPLTRRAIAEYLSRDLPYKLT--PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
           GLP  ++A+ ++++     K+T  PN + +T+G T A +  +  L+ PG  +L+P P +P
Sbjct: 87  GLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYP 146
Query: 136 IYELSAAFRH-IEVRHFDLLPDKGW---EVDLDDIESLADQNTV---ALVIINPGNPCGN 188
            ++    +R  +E+         G+   E  L++    A++  +    +++ NP NP G 
Sbjct: 147 GFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGT 206
Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVF-------GSTV--PIL 238
             +   L  L          +I+DE+Y    F    F+  M V         S V   + 
Sbjct: 207 TMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVH 266
Query: 239 TLGSLSKRWIVPGWRLGWFVTTD 261
            + SLSK   +PG+R+G   + D
Sbjct: 267 VVYSLSKDLGLPGFRVGAIYSND 289

>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase Length = 429

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 78  GLPLTRRAIAEYLSRDLPYKLT--PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
           GLP  ++A+ ++++     K+T  PN + +T+G T A +  +  L+ PG  +L+P P +P
Sbjct: 85  GLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYP 144
Query: 136 IYELSAAFRH-IEVRHFDLLPDKGW---EVDLDDIESLADQNTV---ALVIINPGNPCGN 188
            ++    +R  +E+         G+   E  L++    A++  +    +++ NP NP G 
Sbjct: 145 GFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGT 204
Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVF-------GSTV--PIL 238
             +   L  L          +I+DE+Y    F    F+  M V         S V   + 
Sbjct: 205 TMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVH 264
Query: 239 TLGSLSKRWIVPGWRLGWFVTTD 261
            + SLSK   +PG+R+G   + D
Sbjct: 265 VVYSLSKDLGLPGFRVGAIYSND 287

>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From Silicibacter Pomeroyi Length = 391

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 83/215 (38%), Gaps = 29/215 (13%)
Query: 72  GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPR 131
           GY    GLP  R+ IA          L P  V +T G +    +A   L   G  + +  
Sbjct: 63  GYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGA 122
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDI---------ESLADQNTVALVIINP 182
           PG+P Y      R I +R   L+P     VDL               A  +   L + +P
Sbjct: 123 PGYPSY------RQI-LRALGLVP-----VDLPTAPENRLQPVPADFAGLDLAGLXVASP 170
Query: 183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS 242
            NP G    +     L E A       I+DE+Y  + +  K    + +   T     + S
Sbjct: 171 ANPTGTXLDHAAXGALIEAAQAQGASFISDEIYHGIEYEAKAVTALEL---TDECYVINS 227
Query: 243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK 277
            SK +   GWR+GW V  +      + +VVER+ +
Sbjct: 228 FSKYFSXTGWRVGWXVVPE-----DQVRVVERIAQ 257

>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-Vinylglycine Length = 473

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 78  GLPLTRRAIAEYLSRDLPYKLT--PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
           GLP  ++A+ ++++     K+T  PN + +T+G T A +  +  L+ PG  +L+P P +P
Sbjct: 87  GLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYP 146
Query: 136 IYELSAAFRH-IEVRHFDLLPDKGW---EVDLDDIESLADQNTV---ALVIINPGNPCGN 188
            ++    +R  +E+         G+   E  L++    A++  +    +++ NP NP G 
Sbjct: 147 GFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGT 206
Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVF-------GSTV--PIL 238
             +   L  L          +I+DE+Y    F    F+  M V         S V   + 
Sbjct: 207 TMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVH 266
Query: 239 TLGSLSKRWIVPGWRLGWFVTTD 261
            + SLSK   +PG+R+G   + D
Sbjct: 267 VVYSLSKDLGLPGFRVGAIYSND 289

>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate Decarboxylase From Salmonella Enterica Length = 364

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 3/136 (2%)
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS 191
           PGF  Y  + A    E+R + L    GW++    +E+L   +   L +  P NP G +  
Sbjct: 106 PGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALTP-DLDCLFLCTPNNPTGLLPE 164
Query: 192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG 251
              LQ +A+    L   +I DE +   +  +  F+P         I  L SL+K + +PG
Sbjct: 165 RPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIP--ALKDNPHIWVLRSLTKFYAIPG 222
Query: 252 WRLGWFVTTDPCGMFR 267
            RLG+ V +D   M R
Sbjct: 223 LRLGYLVNSDDAAMAR 238

>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With L-malate Ion Length = 432

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 91/239 (38%), Gaps = 24/239 (10%)
Query: 34  EKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
           + +VISL +GD T                     E ++GY    G    R AIA+     
Sbjct: 55  DAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGG 114
Query: 94  LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN--ILLPRPGFPIYELSAAF-------- 143
           L   +  +DVFV+ G    I     +    G+N  I +  P +P Y  S+          
Sbjct: 115 L--GIGDDDVFVSDGAKCDISRLQVMF---GSNVTIAVQDPSYPAYVDSSVIMGQTGQFN 169
Query: 144 ----RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLA 199
               ++  + +    P+ G+  DL  +       T  +   +P NP G   + + L +L 
Sbjct: 170 TDVQKYGNIEYMRCTPENGFFPDLSTV-----GRTDIIFFCSPNNPTGAAATREQLTQLV 224
Query: 200 ETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
           E A K  ++++ D  Y   +  D P     + G+    +   S SK     G RLGW V
Sbjct: 225 EFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSKYAGFTGVRLGWTV 283

>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With L-Glu: External Aldimine Form Length = 432

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 91/239 (38%), Gaps = 24/239 (10%)
Query: 34  EKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
           + +VISL +GD T                     E ++GY    G    R AIA+     
Sbjct: 55  DAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGG 114
Query: 94  LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN--ILLPRPGFPIYELSAAF-------- 143
           L   +  +DVFV+ G    I     +    G+N  I +  P +P Y  S+          
Sbjct: 115 L--GIGDDDVFVSDGAKCDISRLQVMF---GSNVTIAVQDPSYPAYVDSSVIMGQTGQFN 169
Query: 144 ----RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLA 199
               ++  + +    P+ G+  DL  +       T  +   +P NP G   + + L +L 
Sbjct: 170 TDVQKYGNIEYMRCTPENGFFPDLSTV-----GRTDIIFFCSPNNPTGAAATREQLTQLV 224
Query: 200 ETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
           E A K  ++++ D  Y   +  D P     + G+    +   S S+     G RLGW V
Sbjct: 225 EFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSQYAGFTGVRLGWTV 283

>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From Neisseria Meningitidis Z2491 At 1.91 A Resolution Length = 396

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 14/206 (6%)
Query: 68  EKFNGYAPTAGLPLTRRAIAEYLSR--DLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA 125
            +   Y  TAGLP  R+A A +L R  D       N++    G  +A+   +  +  P +
Sbjct: 57  HELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVS 116
Query: 126 N-----ILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII 180
           +     I+ P P + IYE +      E+ HF   P   +  D   I     + T  + + 
Sbjct: 117 DGIKPAIVSPNPFYQIYEGATLLGGGEI-HFANCPAPSFNPDWRSISEEVWKRTKLVFVC 175
Query: 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF-GDKPF----VPMGVFGSTV 235
           +P NP G+V      +++ +  +K   ++ +DE Y  + F G+KP         +  S  
Sbjct: 176 SPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQ 235
Query: 236 PILTLGSLSKRWIVPGWRLGWFVTTD 261
            +L   SLS R  VPG R G FV  D
Sbjct: 236 KLLXFTSLSXRSNVPGLRSG-FVAGD 260

>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate Aminotransferase From Arabidopsis Thaliana Complexed With Ll-Dap: External Aldimine Form Length = 432

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 90/239 (37%), Gaps = 24/239 (10%)
Query: 34  EKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
           + +VISL +GD T                     E ++GY    G    R AIA+     
Sbjct: 55  DAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGG 114
Query: 94  LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN--ILLPRPGFPIYELSAAF-------- 143
           L   +  +DVFV+ G    I     +    G+N  I +  P +P Y  S+          
Sbjct: 115 L--GIGDDDVFVSDGAKCDISRLQVMF---GSNVTIAVQDPSYPAYVDSSVIMGQTGQFN 169
Query: 144 ----RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLA 199
               ++  + +    P+ G+  DL  +       T  +   +P NP G   + + L +L 
Sbjct: 170 TDVQKYGNIEYMRCTPENGFFPDLSTV-----GRTDIIFFCSPNNPTGAAATREQLTQLV 224
Query: 200 ETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
           E A K  ++++ D  Y   +  D P     + G+    +   S S      G RLGW V
Sbjct: 225 EFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTV 283

>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate Aminotransferase From Clostridium Acetobutylicum Length = 361

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 94/194 (48%), Gaps = 20/194 (10%)
Query: 72  GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPR 131
           G  P        ++I  YL      KL    + + +G ++ I+++++L  +    IL+  
Sbjct: 56  GVYPDVNYRRLNKSIENYL------KLKDIGIVLGNGASEIIELSISLFEK----ILIIV 105
Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG---N 188
           P +  YE++A    + V  F  L D+   +D +DI S  D +  +++I NP NP G   N
Sbjct: 106 PSYAEYEINAKKHGVSVV-FSYL-DENMCIDYEDIISKID-DVDSVIIGNPNNPNGGLIN 162
Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI 248
              + H+ KLAE   K KT++I DE +     GD     +G   +   +  + +++K + 
Sbjct: 163 KEKFIHVLKLAEE--KKKTIII-DEAFIEFT-GDPSSSFVGEIKNYSCLFIIRAMTKFFA 218
Query: 249 VPGWRLGWFVTTDP 262
           +PG R G+ +T + 
Sbjct: 219 MPGIRFGYGITNNK 232

>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase From Arabidopsis Thaliana Length = 432

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 89/239 (37%), Gaps = 24/239 (10%)
Query: 34  EKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
           + +VISL +GD T                     E ++GY    G    R AIA+     
Sbjct: 55  DAQVISLGIGDTTEPIPEVITSAXAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGG 114
Query: 94  LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN--ILLPRPGFPIYELSAAF-------- 143
           L   +  +DVFV+ G    I          G+N  I +  P +P Y  S+          
Sbjct: 115 L--GIGDDDVFVSDGAKCDISRLQVXF---GSNVTIAVQDPSYPAYVDSSVIXGQTGQFN 169
Query: 144 ----RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLA 199
               ++  + +    P+ G+  DL  +       T  +   +P NP G   + + L +L 
Sbjct: 170 TDVQKYGNIEYXRCTPENGFFPDLSTV-----GRTDIIFFCSPNNPTGAAATREQLTQLV 224
Query: 200 ETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
           E A K  ++++ D  Y      D P     + G+        S SK     G RLGW V
Sbjct: 225 EFAKKNGSIIVYDSAYAXYXSDDNPRSIFEIPGAEEVAXETASFSKYAGFTGVRLGWTV 283

>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans Length = 421

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 70/144 (48%), Gaps = 7/144 (4%)
Query: 84  RAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF 143
           +A+ ++  ++  Y +   D+    G   AI +A+   S  G  +L+  P +  Y  +   
Sbjct: 103 QAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSPVY--YPFARTI 160
Query: 144 R---HIEVRHFDLLPDKGWEVDLDDIES-LADQNTVALVIINPGNPCGNVYSYQHLQKLA 199
           R   H  V +   + +  +E+D + +E  + D N    ++ +P NP G V+    L K+A
Sbjct: 161 RLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIA 220
Query: 200 ETANKLKTLVIADEVYGHL-VFGD 222
           E   K   ++++DE++  L +FG+
Sbjct: 221 ELCKKHGVILVSDEIHQDLALFGN 244

>pdb|1C7N|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola Contains A Pyridoxal 5'-Phosphate Cofactor Length = 399

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/139 (20%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
Query: 83  RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA 142
           ++ + +++     + +  + +  T+G   A+  A+   ++PG  +++  P +  + ++  
Sbjct: 72  KKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIK 131
Query: 143 FRHIEVRHFDLLPDKGW-EVDLDDIESLA-DQNTVALVIINPGNPCGNVYSYQHLQKLAE 200
            +  ++   +LL   G+  +D   +E L+ D+N  AL+  +P NP G V+    LQK+ +
Sbjct: 132 NQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKD 191
Query: 201 TANKLKTLVIADEVYGHLV 219
              K   ++ +DE++  L+
Sbjct: 192 IVLKSDLMLWSDEIHFDLI 210

>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase From Clostridium Difficile 630 Crystallized With Magnesium Formate Length = 391

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/148 (20%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 84  RAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE--LSA 141
            +I  +L R   +K+    +  + G   AI + +  L++    I++  P +  +   +  
Sbjct: 74  ESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKN 133
Query: 142 AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201
             R + +     L +  + +D +DIE+   ++    ++ NP NP G V++   L+KL + 
Sbjct: 134 NNRELIISPLQKLENGNYIMDYEDIENKI-KDVKLFILCNPHNPVGRVWTKDELKKLGDI 192
Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMG 229
             K    +I+DE++  ++      +PM 
Sbjct: 193 CLKHNVKIISDEIHSDIILKKHKHIPMA 220

>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate Aminotransferase (Substrate Free Form), From Thermus Thermophilus Hb27 Length = 397

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 15/192 (7%)
Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
           Y+PT G    R  +AE++       + P +V +T+G  QA+D+   +    G+ +LL  P
Sbjct: 70  YSPTEGYAPLRAFVAEWIG------VRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAP 123
Query: 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG--NPCGNVY 190
            +       AFR ++   F  +P      DLD +E +  +     + + P   NP G + 
Sbjct: 124 SY--MGAIQAFR-LQGPRFLTVPAGEEGPDLDALEEVLKRERPRFLYLIPSFQNPTGGLT 180
Query: 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV---PILTLGSLSKRW 247
                ++L +   +   +V+ D+ Y  L FG+     +           ++ LGS SK  
Sbjct: 181 PLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSK-V 239
Query: 248 IVPGWRLGWFVT 259
           + PG R+ + V 
Sbjct: 240 LSPGLRVAFAVA 251

>pdb|1D2F|A Chain A, X-Ray Structure Of Maly From Escherichia Coli: A Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A Modulator In Mal Gene Expression Length = 390

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 13/132 (9%)
Query: 121 SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP------DKGWEVDLDDIES-LADQN 173
           S  G  +++  P +      A ++ IE     ++P        GW  D+  +E+ LA   
Sbjct: 108 SETGEGVVIHTPAY-----DAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPE 162
Query: 174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG-VFG 232
              +++ +P NP G V++   L+ +A+   +    VI+DE++  +V+G++P +P   V  
Sbjct: 163 CKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVAR 222
Query: 233 STVPILTLGSLS 244
               +LT GS S
Sbjct: 223 GDWALLTSGSKS 234

>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate Aminotransferase From Listeria Innocua Clip11262. Length = 363

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 83  RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA 142
           R+ +A++      Y+L   ++  T+G  + I++   +L     N +   P F  Y  +A 
Sbjct: 73  RKEVADF------YQLEEEELIFTAGVDELIELLTRVLLDTTTNTVXATPTFVQYRQNAL 126
Query: 143 FRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202
               EVR   LL D   E DL+   +  D+ T  + I NP NP GN      +Q   +  
Sbjct: 127 IEGAEVREIPLLQD--GEHDLEGXLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDRV 184
Query: 203 NKLKTLVIADEVY 215
                LV+ DE Y
Sbjct: 185 PS-DVLVVLDEAY 196

>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum In Complex With Pmp Length = 369

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/244 (20%), Positives = 101/244 (41%), Gaps = 15/244 (6%)
Query: 83  RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA 142
           R  +A Y+++     +T ++++  +G  + +   +     PG   L  +P + ++ + A 
Sbjct: 75  RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK 134
Query: 143 FRHIEVRHFDLLPDKGWEVDLD-DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201
             H E        D  + +D+D  +E +  +    + +  P NP G+V S   ++++   
Sbjct: 135 GTHTEFIAVSRGAD--FRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINV 192
Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261
           A     +VI DE Y    F   P     +      ++   ++SK +   G RLG+FV  +
Sbjct: 193 A---PGIVIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFV-AN 246
Query: 262 PCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIH----GNFLENFAGS 317
           P   F    ++ R+  +   L   A  + +      L T+ ++ +        LE    +
Sbjct: 247 PA--FIDAVMLVRLPYHLSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEELGYA 304
Query: 318 CVPS 321
            VPS
Sbjct: 305 VVPS 308

>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum Length = 376

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/244 (20%), Positives = 101/244 (41%), Gaps = 15/244 (6%)
Query: 83  RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA 142
           R  +A Y+++     +T ++++  +G  + +   +     PG   L  +P + ++ + A 
Sbjct: 72  RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK 131
Query: 143 FRHIEVRHFDLLPDKGWEVDLD-DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201
             H E        D  + +D+D  +E +  +    + +  P NP G+V S   ++++   
Sbjct: 132 GTHTEFIAVSRGAD--FRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINV 189
Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261
           A     +VI DE Y    F   P     +      ++   ++SK +   G RLG+FV  +
Sbjct: 190 A---PGIVIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFV-AN 243
Query: 262 PCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIH----GNFLENFAGS 317
           P   F    ++ R+  +   L   A  + +      L T+ ++ +        LE    +
Sbjct: 244 PA--FIDAVMLVRLPYHLSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEELGYA 301
Query: 318 CVPS 321
            VPS
Sbjct: 302 VVPS 305

>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate Aminotransferase From Chlamydia Trachomatis Length = 400

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/232 (21%), Positives = 90/232 (38%), Gaps = 15/232 (6%)
Query: 31  EKNEKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRRAIAEYL 90
           E  +  VI+L++GD T                         GY P  GLP  R+ ++E  
Sbjct: 29  ENPQHTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDF 88
Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIY-ELSAAFRHIEVR 149
            R     +   ++F++ G    +   ++    P   + +  P +P Y +++      E+ 
Sbjct: 89  YRGF---VDAKEIFISDGAKVDLFRLLSFFG-PNQTVAIQDPSYPAYLDIARLTGAKEII 144
Query: 150 HFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLV 209
               L +  +  +  +     D +   L + +P NP G V +   L+ +   A + + L+
Sbjct: 145 ALPCLQENAFFPEFPE-----DTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILI 199
Query: 210 IADEVYGHLVFGDKPFVPMGVF---GSTVPILTLGSLSKRWIVPGWRLGWFV 258
           + D  Y    F   P +P  +F    +    + + S SK     G RLGW V
Sbjct: 200 LFDAAYS--TFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTV 249

>pdb|1VP4|A Chain A, Crystal Structure Of A Putative Aminotransferase (Tm1131) From Thermotoga Maritima Msb8 At 1.82 A Resolution Length = 425

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 73  YAPTAGLPLTRRAIAEYLSRDLPYK-LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPR 131
           Y+ T G P+ ++ I + L R      L  +++  T G  QA+D+   L     +  +L  
Sbjct: 81  YSTTEGDPVLKQQILKLLERXYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDD 140
Query: 132 PGFPIYELSA--AFRHIEVRHFDLLPDKGWEVDLDDIE---SLADQN------TVALVII 180
           P +    L A  AFR   + +F ++P +    DL+ +E   S  D+N          V+ 
Sbjct: 141 PAY----LGAINAFRQY-LANFVVVPLEDDGXDLNVLERKLSEFDKNGKIKQVKFIYVVS 195
Query: 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL 240
           N  NP G   S +  + L E A K    ++ D+ YG L +  +   P+   G    ++ L
Sbjct: 196 NFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLL 255
Query: 241 GSLSKRWIVPGWRLG 255
            + SK  + PG R+G
Sbjct: 256 NTFSK-VLAPGLRIG 269

>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium Glutamicum Holo-Form (Plp Covalently Bound ) Length = 369

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/244 (20%), Positives = 100/244 (40%), Gaps = 15/244 (6%)
Query: 83  RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA 142
           R  +A Y+++     +T ++++  +G  + +   +     PG   L  +P + ++ + A 
Sbjct: 75  RDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAK 134
Query: 143 FRHIEVRHFDLLPDKGWEVDLD-DIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201
             H E        D  + +D+D  +E +  +    + +  P NP G+V S   ++++   
Sbjct: 135 GTHTEFIAVSRGAD--FRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINV 192
Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261
           A     +VI DE Y    F   P     +      ++   ++S  +   G RLG+FV  +
Sbjct: 193 A---PGIVIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTMSXAFDFAGGRLGYFV-AN 246
Query: 262 PCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIH----GNFLENFAGS 317
           P   F    ++ R+  +   L   A  + +      L T+ ++ +        LE    +
Sbjct: 247 PA--FIDAVMLVRLPYHLSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEELGYA 304
Query: 318 CVPS 321
            VPS
Sbjct: 305 VVPS 308

>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1) From Helicobacter Pylori 26695 At 2.19 A Resolution Length = 376

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 89/225 (39%), Gaps = 20/225 (8%)
Query: 67  SEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV--AMALLSRPG 124
           +   N Y  +A     R A   +  R    +L  N++  T G  + +    +  L     
Sbjct: 49  THSLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVLFDYQN 108
Query: 125 ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN-PG 183
             I  P P + IYE +A F    ++   LL     E D     +  +   V LVI+N P 
Sbjct: 109 PTIAYPNPFYQIYEGAAKF----IKAKSLLXPLTKENDFTPSLNEKELQEVDLVILNSPN 164
Query: 184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKP---FVPMGVFGSTV--PIL 238
           NP G   S + L    + A K   ++I DE Y  +     P        + G+     +L
Sbjct: 165 NPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACXLAGNEAFKNVL 224
Query: 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG 283
            + SLSKR   PG R G F+  D        +++E+ K +   LG
Sbjct: 225 VIHSLSKRSSAPGLRSG-FIAGD-------SRLLEKYKAFRAYLG 261

>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors Length = 439

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 43/247 (17%)
Query: 73  YAPTAGLP-----LTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGA 125
           Y+P+AG+P     L +  I  +    + Y  +    D+ VTSG  Q +     ++  PG 
Sbjct: 74  YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLXKVFEMIINPGD 133
Query: 126 NILLPRPGF-----PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL--------ADQ 172
           N+LL  P +      ++ L     ++      ++PD      L DI S           +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPD-----SLRDILSRWKPEDAKNPQK 188
Query: 173 NTVALV--IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF--GDKP-FVP 227
           NT   +  + N  NP GN  + +  +++ E A K   L+I D+ Y  L F  G  P F+ 
Sbjct: 189 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNSGRVPTFLS 248
Query: 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPA 286
           M V G    ++   S SK  I  G R+G+     P        ++ER+  +  +    P+
Sbjct: 249 MDVDGR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPS 296
Query: 287 TFIQVCI 293
           TF Q+ I
Sbjct: 297 TFNQLMI 303

>pdb|3EUC|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase (Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A Resolution Length = 367

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 29/173 (16%)
Query: 102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEV----RHFDLLPDK 157
           +V + +G  + I       +RPGA +  P PGF  Y  SA F  +E        D   D+
Sbjct: 87  EVLLGNGSDEIISXLALAAARPGAKVXAPVPGFVXYAXSAQFAGLEFVGVPLRADFTLDR 146
Query: 158 GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK--LKTLVIADEVY 215
           G       + + A+     + +  P NP GN++     + +   A     ++LV+ DE Y
Sbjct: 147 GAX-----LAAXAEHQPAIVYLAYPNNPTGNLFDAADXEAIVRAAQGSVCRSLVVVDEAY 201
Query: 216 GHLVFGDKPFVP------MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP 262
                  +PF        +  FG+ +   T+  L     + G RLG +V  DP
Sbjct: 202 -------QPFAQESWXSRLTDFGNLLVXRTVSKLG----LAGIRLG-YVAGDP 242

>pdb|4GDY|A Chain A, Kynurenine Aminotransferase Ii Inhibitors Length = 439

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 43/247 (17%)
Query: 73  YAPTAGLP-----LTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGA 125
           Y+P+AG+P     L +  I  +    + Y  +    D+ VTSG  Q +     ++  PG 
Sbjct: 74  YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 126 NILLPRPGF-----PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL--------ADQ 172
           N+LL  P +      ++ L     ++      ++PD      L DI S           +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPD-----SLRDILSRWKPEDAKNPQK 188
Query: 173 NTVALV--IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF--GDKP-FVP 227
           NT   +  + N  NP GN  + +  +++ E A K   L+I D+ Y  L F  G  P F+ 
Sbjct: 189 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNSGRVPTFLS 248
Query: 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPA 286
           M V G    ++   S SK  I  G R+G+     P        ++ER+  +  +    P+
Sbjct: 249 MDVDGR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPS 296
Query: 287 TFIQVCI 293
           TF Q+ I
Sbjct: 297 TFNQLMI 303

>pdb|2R2N|A Chain A, The Crystal Structure Of Human Kynurenine Aminotransferase Ii In Complex With Kynurenine Length = 425

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 103/247 (41%), Gaps = 43/247 (17%)
Query: 73  YAPTAGLP-----LTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGA 125
           Y+P+AG+P     L +  I  +    + Y  +    D+ VTSG  Q +     ++  PG 
Sbjct: 74  YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 126 NILLPRPGF-----PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL--------ADQ 172
           N+LL  P +      ++ L     ++      ++PD      L DI S           +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPD-----SLRDILSRWKPEDAKNPQK 188
Query: 173 NTVALV--IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD---KPFVP 227
           NT   +  + N  NP GN  + +  +++ E A K   L+I D+ Y  L F       F+ 
Sbjct: 189 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLS 248
Query: 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPA 286
           M V G    ++   S SK  I  G R+G+     P        ++ER+  +  +    P+
Sbjct: 249 MDVDGR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPS 296
Query: 287 TFIQVCI 293
           TF Q+ I
Sbjct: 297 TFNQLMI 303

>pdb|2XH1|A Chain A, Crystal Structure Of Human Kat Ii-Inhibitor Complex Length = 425

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 100/243 (41%), Gaps = 35/243 (14%)
Query: 73  YAPTAGLP-----LTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGA 125
           Y+P+AG+P     L +  I  +    + Y  +    D+ VTSG  Q +     ++  PG 
Sbjct: 74  YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 126 NILLPRPGF-----PIYELSAAFRHIEVRHFDLLPD------KGWEVDLDDIESLADQNT 174
           N+LL  P +      ++ L     ++      ++PD        W+ + D      +   
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPE-DAKNPQKNTPK 192
Query: 175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD---KPFVPMGVF 231
               + N  NP GN  + +  +++ E A K   L+I D+ Y  L F       F+ M V 
Sbjct: 193 FLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVD 252
Query: 232 GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPATFIQ 290
           G    ++   S SK  I  G R+G+     P        ++ER+  +  +    P+TF Q
Sbjct: 253 GR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPSTFNQ 300
Query: 291 VCI 293
           + I
Sbjct: 301 LMI 303

>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase (Ttha0342) From Thermus Thermophilus Hb8 Length = 376

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 77/164 (46%), Gaps = 8/164 (4%)
Query: 101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE 160
            +     G  + +   +  L+ P   +LLP   +P Y    A R   +R F L+P +  E
Sbjct: 88  REALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSY--FGAARVASLRTF-LIPLR--E 142
Query: 161 VDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH 217
             L D++++ +   +    L++  P NP G V  + + ++    A K    +I D  Y  
Sbjct: 143 DGLADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVD 202
Query: 218 LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261
            V+  +   P+ + G+   ++ L SLSK + + G+RLG+ + ++
Sbjct: 203 QVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSE 246

>pdb|3UE8|A Chain A, Kynurenine Aminotransferase Ii Inhibitors Length = 439

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 103/247 (41%), Gaps = 43/247 (17%)
Query: 73  YAPTAGLP-----LTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGA 125
           Y+P+AG+P     L +  I  +    + Y  +    D+ VTSG  Q +     ++  PG 
Sbjct: 74  YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 126 NILLPRPGF-----PIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL--------ADQ 172
           N+LL  P +      ++ L     ++      ++PD      L DI S           +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPD-----SLRDILSRWKPEDAKNPQK 188
Query: 173 NTVALV--IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD---KPFVP 227
           NT   +  + N  NP GN  + +  +++ E A K   L+I D+ Y  L F       F+ 
Sbjct: 189 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLS 248
Query: 228 MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPA 286
           M V G    ++   S SK  I  G R+G+     P        ++ER+  +  +    P+
Sbjct: 249 MDVDGR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPS 296
Query: 287 TFIQVCI 293
           TF Q+ I
Sbjct: 297 TFNQLMI 303

>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas Reinhardtii Length = 449

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 93/248 (37%), Gaps = 26/248 (10%)
Query: 26  QSVDDEKN-EKKVISLAMGDPTVHSCFXXXXXXXXXXXXXXXSEKFNGYAPTAGLPLTRR 84
           +    EKN + K+ISL +GD T                     E ++GY    G    R 
Sbjct: 59  RKAHQEKNPDAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALRE 118
Query: 85  AIAEYLSRDLPYKLTPNDVFVTSGCTQAI-DVAMALLSRPGANILLPRPGFPIYELSAAF 143
           A+A             +++F++ G    I  + M   S+P   + +  P +P+Y  ++  
Sbjct: 119 AVASTFYGHA--GRAADEIFISDGSKCDIARIQMMFGSKP--TVAVQDPSYPVYVDTSVM 174
Query: 144 RHIEVRH----FDLL------PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ 193
             +   H    FD +      PD  +  DL        + T  +   +P NP G   +  
Sbjct: 175 MGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----KRTDIIFFCSPNNPTGAAATRA 229
Query: 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF---GSTVPILTLGSLSKRWIVP 250
            L +L   A K  ++++ D  Y   +    P  P  ++   G+    +   S SK     
Sbjct: 230 QLTELVNFARKNGSILVYDAAYALYI--SNPDCPKTIYEIPGADEVAIETCSFSKYAGFT 287
Query: 251 GWRLGWFV 258
           G RLGW V
Sbjct: 288 GVRLGWTV 295

>pdb|2ZY2|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase Length = 544

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 32/201 (15%)
Query: 75  PTAGLPLTRRAIAEYLSRDLPYKLTPN---DVFVTSGCTQAI-----DVAMALLSRPGAN 126
           P   L ++ + + +Y+ R++     P    D+F   G T A+      + ++ L + G  
Sbjct: 136 PPRMLTVSEQIVRQYIVREMAGGAVPPESVDLFAVEGGTAAMAYIFESLRISGLLKAGDK 195
Query: 127 ILLPRPGF-PIYELSAAFRHIEVRHFDLL-------PDKGWEVDLDDIESLADQNTVALV 178
           + +  P F P  E+       E+  +DL        PD GW+    +++ L D +     
Sbjct: 196 VAIGMPVFTPYIEIP------ELAQYDLKEVPIHADPDNGWQYSDAELDKLKDPDVKIFF 249
Query: 179 IINPGNPCGNVYSYQHLQKLAETANKLK--TLVIADEVYGHLVFGDKPFVPMGVFGSTVP 236
            +NP NP       + L ++     + +   L++ D+VYG   F D+         S  P
Sbjct: 250 CVNPSNPPSVKMDQRSLDRVRAIVAEQRPDLLILTDDVYG--TFADE----FQSLFSVCP 303
Query: 237 ILTL--GSLSKRWIVPGWRLG 255
             TL   S SK +   GWRLG
Sbjct: 304 RNTLLVYSFSKYFGATGWRLG 324

>pdb|2QLR|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii Length = 425

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 98/243 (40%), Gaps = 35/243 (14%)
Query: 73  YAPTAGLP-----LTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGA 125
           Y+P+AG+P     L +  I  +    + Y  +    D+ VTSG  Q +     ++  PG 
Sbjct: 74  YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 126 NILLPRPGF-----PIYELSAAFRHIEVRHFDLLPD------KGWEVDLDDIESLADQNT 174
           N+LL  P +      ++ L     ++      ++PD        W+ + D      +   
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPE-DAKNPQKNTPK 192
Query: 175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD---KPFVPMGVF 231
               + N  NP GN  + +  +++ E A K   L+I D+ Y  L F       F+ M V 
Sbjct: 193 FLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVD 252
Query: 232 GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPATFIQ 290
           G  +   +   +    I  G R+G+     P        ++ER+  +  +    P+TF Q
Sbjct: 253 GRVIRADSFSXI----ISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPSTFNQ 300
Query: 291 VCI 293
           + I
Sbjct: 301 LMI 303

>pdb|2VGZ|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii Length = 427

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 98/243 (40%), Gaps = 35/243 (14%)
Query: 73  YAPTAGLP-----LTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMALLSRPGA 125
           Y+P+AG+P     L +  I  +    + Y  +    D+ VTSG  Q +     ++  PG 
Sbjct: 76  YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 135
Query: 126 NILLPRPGF-----PIYELSAAFRHIEVRHFDLLPD------KGWEVDLDDIESLADQNT 174
           N+LL  P +      ++ L     ++      ++PD        W+ + D      +   
Sbjct: 136 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPE-DAKNPQKNTPK 194
Query: 175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD---KPFVPMGVF 231
               + N  NP GN  + +  +++ E A K   L+I D+ Y  L F       F+ M V 
Sbjct: 195 FLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVD 254
Query: 232 GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPATFIQ 290
           G  +   +   +    I  G R+G+     P        ++ER+  +  +    P+TF Q
Sbjct: 255 GRVIRADSFSXI----ISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPSTFNQ 302
Query: 291 VCI 293
           + I
Sbjct: 303 LMI 305

>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase (Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15 A Resolution Length = 407

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF 220
           +DL  +E          +  NP NP G VYS + + ++A  A +    VIAD++Y  L +
Sbjct: 167 LDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRY 226
Query: 221 GDKPFVPMGVFGS--TVPILTLGSLSKRWIVPGWRLG 255
               +  +    +     ++T+   S    + G+RLG
Sbjct: 227 AGASYTHLRAEAAVDAENVVTIXGPSXTESLSGYRLG 263

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	343
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	1e-115
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	1e-108
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	5e-51
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	1e-50
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	7e-49
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	3e-48
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	1e-46
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	6e-46
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	7e-46
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	1e-45
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	4e-45
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	7e-44
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	8e-43
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	1e-42
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	2e-42
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	3e-40
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	3e-40
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	1e-39
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	1e-39
3ele_A	398	Amino transferase; RER070207001803, structural gen	3e-38
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	5e-38
3nra_A	407	Aspartate aminotransferase; structural genomics, j	4e-37
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	6e-37
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	8e-37
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	8e-37
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	1e-36
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	2e-36
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	6e-36
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	8e-36
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	4e-35
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	9e-35
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	2e-33
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	2e-31
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	2e-31
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	2e-31
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	5e-31
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	8e-31
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	1e-30
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	2e-30
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	2e-29
1vp4_A	425	Aminotransferase, putative; structural genomics, j	3e-29
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	7e-28
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	1e-26
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	3e-26
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	3e-26
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	3e-26
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	3e-23
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	8e-23
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	1e-22
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	3e-22
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	2e-21
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	1e-20
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	1e-19
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	1e-19
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	7e-19
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	1e-18
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	1e-18
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	2e-18
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	2e-18
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	3e-18
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	3e-18
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	3e-18
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	5e-18
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	1e-17
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	1e-16
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	5e-16
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	5e-16
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	2e-15
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	2e-04

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A* Length = 427

 Score =  340 bits (874), Expect = e-115
 Identities = 112/260 (43%), Positives = 162/260 (62%), Gaps = 2/260 (0%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
               K +ISL++GDPTV     T    T+A+ +AL S K+NGYAP+ G   +R  IA Y 
Sbjct: 50  PNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYY 109

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
                  L   DV +TSGC+QAID+ +A+L+ PG NIL+PRPGF +Y+  A    IEV+ 
Sbjct: 110 HCP-EAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKL 168

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
           ++LLP+K WE+DL  +E L D+ T  L++ NP NPCG+V+S +HLQK+   A +    ++
Sbjct: 169 YNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPIL 228

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270
           ADE+YG +VF D  + P+    + VPIL+ G L+KRW+VPGWRLGW +  D   +F   +
Sbjct: 229 ADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIF-GNE 287

Query: 271 VVERMKKYFDILGDPATFIQ 290
           + + + K    +  P T +Q
Sbjct: 288 IRDGLVKLSQRILGPCTIVQ 307

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1 Length = 416

 Score =  322 bits (827), Expect = e-108
 Identities = 89/277 (32%), Positives = 146/277 (52%), Gaps = 12/277 (4%)

Query: 24  LMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR 83
           +  +     + K +I L++GDPT+     T+    + + EA+ S++ NGY PT G P  R
Sbjct: 22  VSDNAKPSPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAR 81

Query: 84  RAIAEYLSR------DLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIY 137
            A+A +         +L   +  ++V + SG +  I +A+  +   G   L+P+PGFP Y
Sbjct: 82  EAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHY 141

Query: 138 ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQK 197
           E       I +  ++  P+  WE DLD+I  L D  T  L++ NP NPCG+ +S +H++ 
Sbjct: 142 ETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVED 201

Query: 198 LAETANKLKTLVIADEVYGHLVFGDK----PFVPMGVFGSTVPILTLGSLSKRWIVPGWR 253
           +   A +L+  + +DE+Y  +VF  K     F  +  F +TVP + LG  +K  +VPGWR
Sbjct: 202 IVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWR 261

Query: 254 LGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQ 290
           LGW +  DP G    P  +E +K+   ++  P T +Q
Sbjct: 262 LGWLLYVDPHG--NGPSFLEGLKRVGMLVCGPCTVVQ 296

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1 Length = 406

 Score =  173 bits (441), Expect = 5e-51
 Identities = 76/232 (32%), Positives = 116/232 (50%), Gaps = 3/232 (1%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
           EK   KVI L +GDP     F       EA  +A+  E  N Y  + GLP  R+AI E  
Sbjct: 34  EKKGIKVIRLNIGDPVKFD-FQPPEHMKEAYCKAI-KEGHNYYGDSEGLPELRKAIVERE 91

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
            R     +TP+DV VT+  T+A+ +    L  PG  IL+P P +P Y     F   +   
Sbjct: 92  KRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVE 151

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
           +  + ++ W+ D+DDI       T A+ +INP NP G +Y  + L+++   A + +  VI
Sbjct: 152 YRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVI 211

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP 262
           +DE+Y  + +  +  +  G     VP++ +  LSK +   GWRLG+    DP
Sbjct: 212 SDEIYDLMTYEGE-HISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDP 262

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare} Length = 500

 Score =  174 bits (444), Expect = 1e-50
 Identities = 59/269 (21%), Positives = 112/269 (41%), Gaps = 22/269 (8%)

Query: 42  MGDPTVHSCFHT-THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP 100
           +    + + F   +    + +   +       Y+ + G+   R AIA  ++    +    
Sbjct: 98  LQREEIKTLFSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANA 157

Query: 101 NDVFVTSGCTQAIDVAM-ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW 159
           +D+F+T G +  + + M  L+      IL+P P +P+Y  S A     +  + L    GW
Sbjct: 158 DDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGW 217

Query: 160 EVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
            ++  D++   +       N  ALV+INPGNP G V + ++   + +       +++ADE
Sbjct: 218 GLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADE 277

Query: 214 VYGHLVFGD-KPFV-------PMGVFGSTVPILTLGSLSKRWI-VPGWRLGWFVTTDPCG 264
           VY   ++ D K F         +G     +P+++  S+SK +    G R G+F  T    
Sbjct: 278 VYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGF-- 335

Query: 265 MFRKPKVVERMKKYFDILGDPATFIQVCI 293
                 V E++ K   +        Q+  
Sbjct: 336 ---SAPVREQIYKIASVNLCSNITGQILA 361

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis} Length = 437

 Score =  168 bits (428), Expect = 7e-49
 Identities = 46/232 (19%), Positives = 80/232 (34%), Gaps = 14/232 (6%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
            K   + MG P          +  E   + L     + Y    GLP  ++  + +    +
Sbjct: 44  TKFCRMEMGVPG----LPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFV 99

Query: 95  PYKLTPNDVFVTSGCTQAIDVAMALLSR----PGANILLPRPGFPIYELSAAFRHIEVRH 150
              +       T G  Q   V+  + +R         L   PGF + +L       +   
Sbjct: 100 NIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFES 159

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
           FDL   +G ++       L      +++  NP NP     + + L+ + E A K   +VI
Sbjct: 160 FDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVI 219

Query: 211 ADEVYGHLVFGDKPFVPMG-VFGSTVP-----ILTLGSLSKRWIVPGWRLGW 256
            D  Y  + F      P   ++  +V       +   S SK +   G R+G 
Sbjct: 220 EDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGV 271

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens} Length = 498

 Score =  168 bits (427), Expect = 3e-48
 Identities = 55/265 (20%), Positives = 112/265 (42%), Gaps = 27/265 (10%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVA--EALLSEKFNGYAPTAGLPLTRRAIAEYLS- 91
           ++V++L      + S          A    +A        Y+ + G+   R  +A Y++ 
Sbjct: 85  RQVMALCTYPNLLDSPSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITR 144

Query: 92  RDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPG----ANILLPRPGFPIYELSAAFRHIE 147
           RD      P+++++T+G +  I   + +L   G      +++P P +P+Y    +     
Sbjct: 145 RDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAI 204

Query: 148 VRHFDLLPDKGWEVDLDDIESLADQNTV-----ALVIINPGNPCGNVYSYQHLQKLAETA 202
             ++ L  +  W ++++++     +         L IINPGNP G V S + ++ +   A
Sbjct: 205 QVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFA 264

Query: 203 NKLKTLVIADEVYGHLVF-GDKPFVPM--------GVFGSTVPILTLGSLSKRWIVP-GW 252
            + K  ++ADEVY   V+  D  F             + S V + +  S SK ++   G+
Sbjct: 265 WEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGY 324

Query: 253 RLGWFVTTDPCGMFRKPKVVERMKK 277
           R G+    +       P++  ++ K
Sbjct: 325 RGGYMEVINL-----HPEIKGQLVK 344

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3} Length = 391

 Score =  161 bits (411), Expect = 1e-46
 Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 11/228 (4%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
           E+  +++I + +G P           A EA+A++L      GY    GLP  R+ IA   
Sbjct: 27  EEAGRRIIHMEVGQPG----TGAPRGAVEALAKSL-ETDALGYTVALGLPALRQRIARLY 81

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
                  L P  V +T G +    +A   L   G  + +  PG+P Y        +    
Sbjct: 82  GEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVD 141

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
               P+   +    D   L   +   L++ +P NP G +  +  +  L E A       I
Sbjct: 142 LPTAPENRLQPVPADFAGL---DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFI 198

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
           +DE+Y  + +  K    + +         + S SK + + GWR+GW V
Sbjct: 199 SDEIYHGIEYEAKAVTALELTDECY---VINSFSKYFSMTGWRVGWMV 243

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1 Length = 386

 Score =  159 bits (405), Expect = 6e-46
 Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 14/229 (6%)

Query: 33  NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSR 92
            + + I+L+ G P     F       E +A  + ++  N YAP  G+   R AIA+   R
Sbjct: 28  QQHQAINLSQGFPD----FDGPRYLQERLAHHV-AQGANQYAPMTGVQALREAIAQKTER 82

Query: 93  DLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHF 151
              Y+    +D+ VT+G T+A+  A+  L R G  ++   P +  Y  + A     V+  
Sbjct: 83  LYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRM 142

Query: 152 DLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA 211
            L P   + VD  +  +L  + T  +++  P NP   V+       L +     +  VI+
Sbjct: 143 ALQPP-HFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVIS 201

Query: 212 DEVYGHLVFGDKPFVPM----GVFGSTVPILTLGSLSKRWIVPGWRLGW 256
           DEVY H+ F  +    +     +    V    + S  K + + GW++G+
Sbjct: 202 DEVYEHINFSQQGHASVLAHPQLRERAV---AVSSFGKTYHMTGWKVGY 247

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis} Length = 411

 Score =  160 bits (406), Expect = 7e-46
 Identities = 70/230 (30%), Positives = 99/230 (43%), Gaps = 14/230 (6%)

Query: 33  NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSR 92
                ++L  G P             +A  +A+ +   N Y P  G    RRAIA    R
Sbjct: 23  TRIGAVNLGQGFPD----EDGPPKMLQAAQDAI-AGGVNQYPPGPGSAPLRRAIAAQRRR 77

Query: 93  DLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHF 151
                  P  +V VT G T+AI  A+  L  PG+ +LL  P +  Y    A         
Sbjct: 78  HFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTV 137

Query: 152 DL-LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
            L    +G+ +D D +       T AL+I +P NP G V S   L  +AE A     +VI
Sbjct: 138 PLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVI 197

Query: 211 ADEVYGHLVFGDKPFVPM----GVFGSTVPILTLGSLSKRWIVPGWRLGW 256
            DEVY HLVF     +P+    G+   T+   T+ S +K +   GW++GW
Sbjct: 198 TDEVYEHLVFDHARHLPLAGFDGMAERTI---TISSAAKMFNCTGWKIGW 244

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A* Length = 375

 Score =  158 bits (403), Expect = 1e-45
 Identities = 53/245 (21%), Positives = 100/245 (40%), Gaps = 23/245 (9%)

Query: 34  EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
              + SL + +      F  +    E   + L       Y    G P  ++++++  +  
Sbjct: 26  GVSISSLTLEEL-----FALSGTNPEDFYKKLQ-GTKLNYGWIEGSPAFKKSVSQLYTG- 78

Query: 94  LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL 153
               + P  +  T+G T A  + +  L  PG +++   P +            EV  + +
Sbjct: 79  ----VKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIPKSLGAEVDLWQI 134

Query: 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
             + GW  DL+ +  L    T  + I N  NP G V    +L++L E A+++   +++DE
Sbjct: 135 EEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDE 194

Query: 214 VYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273
           VY      D P +   V+   +    + SLSK + +PG R+GW             +V +
Sbjct: 195 VYRSFSELDVPSII-EVYDKGI---AVNSLSKTYSLPGIRIGWVAA--------NHQVTD 242

Query: 274 RMKKY 278
            ++ Y
Sbjct: 243 ILRDY 247

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A* Length = 381

 Score =  157 bits (399), Expect = 4e-45
 Identities = 70/231 (30%), Positives = 105/231 (45%), Gaps = 27/231 (11%)

Query: 33  NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSR 92
                ++L  G P+            EAV  AL   + + YAP AGLP  R A+AE  + 
Sbjct: 23  QRLGAVNLGQGFPS----NPPPPFLLEAVRRAL--GRQDQYAPPAGLPALREALAEEFAV 76

Query: 93  DLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF-----RHIE 147
           +      P  V VTSG T+A+ V +  L  PG  +++  P F +Y   A       R + 
Sbjct: 77  E------PESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVR 130

Query: 148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207
           +     L  +G+ +DL  +E      T AL++  P NP G V+  + L+ +A  A     
Sbjct: 131 LD----LTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDL 186

Query: 208 LVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLGW 256
            +I+DEVY  L +G++P           P    T+GS  KR    G+R+GW
Sbjct: 187 FLISDEVYDELYYGERPRRLR----EFAPERTFTVGSAGKRLEATGYRVGW 233

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} PDB: 2zjg_A* 3e2f_A* 3e2z_A* Length = 410

 Score =  154 bits (392), Expect = 7e-44
 Identities = 61/238 (25%), Positives = 101/238 (42%), Gaps = 21/238 (8%)

Query: 33  NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSR 92
            +  V++L  G P             E +++A   +  N Y    G P   +A++    +
Sbjct: 21  ADPSVVNLGQGFPD----ISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGK 76

Query: 93  DLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHF 151
               ++ PN ++ V  G   ++  ++  L  PG  +++  P +  YE             
Sbjct: 77  IYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFI 136

Query: 152 DLLPDK---------GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202
            L              W  D  ++ES     T A+++  P NP G VY+ Q LQ +A+  
Sbjct: 137 PLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLC 196

Query: 203 NKLKTLVIADEVYGHLVFGDKPFVPM----GVFGSTVPILTLGSLSKRWIVPGWRLGW 256
            K  TL I+DEVY  LV+     V +    G++  T+   T+GS  K + V GW+LGW
Sbjct: 197 VKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTI---TIGSAGKTFSVTGWKLGW 251

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae} Length = 447

 Score =  152 bits (387), Expect = 8e-43
 Identities = 58/238 (24%), Positives = 97/238 (40%), Gaps = 21/238 (8%)

Query: 33  NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSR 92
             +++I+L  G  +    +     A +   +AL     N Y+PT G P    ++ +  S 
Sbjct: 55  QGRELINLGQGFFS----YSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSP 110

Query: 93  DLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF---RHIEVR 149
               +L   +V VT+G  + I   +  L   G  +++  P F  Y  +      + + V 
Sbjct: 111 IYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVP 170

Query: 150 -------HFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202
                         + W +D +  E      T A++I  P NP G V++ + L  L    
Sbjct: 171 INPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGNIC 230

Query: 203 NKLKTLVIADEVYGHLVFGDKPFVPM----GVFGSTVPILTLGSLSKRWIVPGWRLGW 256
            K   ++I+DEVY HL F D           +   T+   T+GS  K +   GWR+GW
Sbjct: 231 VKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTL---TVGSAGKSFAATGWRIGW 285

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A* Length = 422

 Score =  151 bits (384), Expect = 1e-42
 Identities = 62/240 (25%), Positives = 98/240 (40%), Gaps = 23/240 (9%)

Query: 33  NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS-EKFNGYAPTAGLPLTRRAIAEYLS 91
           +E  V++L  G P     F     A EA   A+      N Y  T G P   + +A +  
Sbjct: 26  SEHDVVNLGQGFPD----FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFG 81

Query: 92  RDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
             L  ++ P  +V VT G   A+  A   L   G  +++  P F  YE            
Sbjct: 82  ELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVF 141

Query: 151 FDLLPDK----------GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAE 200
             L P             W++D  ++       T ALV+  P NP G V+S + L+ +A 
Sbjct: 142 VSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVAS 201

Query: 201 TANKLKTLVIADEVYGHLVFGDKPFVPM----GVFGSTVPILTLGSLSKRWIVPGWRLGW 256
              +   + I DEVY  +V+     + +    G++  T+   T+GS  K +   GW++GW
Sbjct: 202 LCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTL---TIGSAGKTFSATGWKVGW 258

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A* Length = 429

 Score =  151 bits (383), Expect = 2e-42
 Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 22/239 (9%)

Query: 33  NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS--EKFNGYAPTAGLPLTRRAIAEYL 90
            + K ++L  G P     +H    A  A+A A  S     N Y    G P   +A+++  
Sbjct: 35  AQYKPLNLGQGFPD----YHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLY 90

Query: 91  SRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVR 149
           S+ +   + P  +V VT G  +A+   +      G  +++  P F  YE          R
Sbjct: 91  SQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPR 150

Query: 150 HFDLLPDKG--------WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201
              L P+K         W +D +++E+L ++ T  ++I  P NP G V     L+ +A  
Sbjct: 151 FIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANL 210

Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPM----GVFGSTVPILTLGSLSKRWIVPGWRLGW 256
             K   L ++DEVY H+VF     + +    G++  T+   T+GS  K + + GW++GW
Sbjct: 211 CKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTI---TIGSAGKTFSLTGWKIGW 266

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A* Length = 428

 Score =  145 bits (368), Expect = 3e-40
 Identities = 50/271 (18%), Positives = 98/271 (36%), Gaps = 29/271 (10%)

Query: 29  DDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEAL-----LSEKFNGYAPTAGLPLTR 83
              KN   VI + + +  +        +                +    +    GLP  R
Sbjct: 30  HPLKNPNGVIQMGLAENQLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFR 89

Query: 84  RAIAEYLSR--DLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA 141
           +AIA+++ +      +  P  V +  G T A +  +  L+ PG   L+P P +P +    
Sbjct: 90  KAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDL 149

Query: 142 AFRH-IEVRHFDLLPDKGWEVDLDDIES------LADQNTVALVIINPGNPCGNVYSYQH 194
            +R  +++          +++    ++        ++     L++ NP NP G       
Sbjct: 150 RWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDT 209

Query: 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--------ILTLGSLSKR 246
           L+ +    N+    ++ DE+Y   VF    FV +                +  + SLSK 
Sbjct: 210 LKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKD 269

Query: 247 WIVPGWRLGWFVTTDPCGMFRKPKVVERMKK 277
             +PG+R+G   + +         VV   +K
Sbjct: 270 MGLPGFRVGIIYSFN-------DDVVNCARK 293

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1 Length = 409

 Score =  145 bits (367), Expect = 3e-40
 Identities = 63/247 (25%), Positives = 114/247 (46%), Gaps = 16/247 (6%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
           +K   ++  L +G P       T  V  E + E     +   Y+ +AG+   R A A Y 
Sbjct: 39  KKRGVRIHHLNIGQPD----LKTPEVFFERIYEN--KPEVVYYSHSAGIWELREAFASYY 92

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
            R     + P +V VT+G ++AI  + A+++ PG  IL+  P +  Y   A    +++  
Sbjct: 93  KRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIP 152

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
                ++G+ +   ++ES  ++ T  +V+ NP NP G VY    ++ L E A +    +I
Sbjct: 153 VTRRMEEGFAIP-QNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLI 211

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270
            DEVY  +VF  +    + +    V  + + S+SK++   G R+G  +T       R  +
Sbjct: 212 VDEVYSEIVFRGEFASALSIESDKV--VVIDSVSKKFSACGARVGCLIT-------RNEE 262

Query: 271 VVERMKK 277
           ++    K
Sbjct: 263 LISHAMK 269

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium} Length = 417

 Score =  143 bits (364), Expect = 1e-39
 Identities = 54/236 (22%), Positives = 85/236 (36%), Gaps = 20/236 (8%)

Query: 37  VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN----GYAPTAGLPLTRRAIAEYLSR 92
            I L  G+P  H      +     + + + S K       Y    G      A+A  L  
Sbjct: 33  AIMLGGGNP-AHIPAMQDYFQ-TLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRE 90

Query: 93  DLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN---ILLPRPGFPIY-------ELSAA 142
            L + + P ++ +T+G   A      L +   A+     +  P  P Y            
Sbjct: 91  TLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDL 150

Query: 143 FRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202
           F        +LLP+  ++  +D       + T  + +  P NP GNV + + L KL   A
Sbjct: 151 FVSARPN-IELLPEGQFKYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELMKLDRLA 209

Query: 203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
           N+    ++ D  YG    G   F       +   IL   SLSK   +PG R G  +
Sbjct: 210 NQHNIPLVIDNAYGVPFPGI-IFSEARPLWNPNIIL-CMSLSK-LGLPGSRCGIII 262

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A* Length = 435

 Score =  144 bits (364), Expect = 1e-39
 Identities = 51/274 (18%), Positives = 102/274 (37%), Gaps = 32/274 (11%)

Query: 29  DDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNG------YAPTAGLPLT 82
            +  N   +I + + +  +      + +A    A A      +       +    GLP  
Sbjct: 32  HEVHNTNGIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAF 91

Query: 83  RRAIAEYLS--RDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS 140
           ++A+ ++++  R       PN + +T+G T A +  +  L+ PG  +L+P P +P ++  
Sbjct: 92  KKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRD 151

Query: 141 AAFRH-IEVRHFDLLPDKGWEVDLDDIES------LADQNTVALVIINPGNPCGNVYSYQ 193
             +R  +E+         G+++    +E         +     +++ NP NP G   +  
Sbjct: 152 LKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRN 211

Query: 194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP----------ILTLGSL 243
            L  L          +I+DE+Y    F    F+ +                  +  + SL
Sbjct: 212 ELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSL 271

Query: 244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK 277
           SK   +PG+R+G   +           VV    K
Sbjct: 272 SKDLGLPGFRVGAIYS-------NDDMVVAAATK 298

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale} Length = 398

 Score =  139 bits (353), Expect = 3e-38
 Identities = 62/285 (21%), Positives = 119/285 (41%), Gaps = 34/285 (11%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEAL---LSEKFNGYAPTAGLPLTRRAIA 87
              ++ V   ++G+P+         +  + + E +    S   +GY    G   TR AIA
Sbjct: 31  IVGKENVYDFSIGNPS----IPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIA 86

Query: 88  EYLSRDLPYKLTPNDVFVTSGCTQAIDVAM-ALLSRPGANILLPRPGFPIYELSAAFRHI 146
           E+L+         +++++T G   ++ +   AL S      +   P FP Y++       
Sbjct: 87  EFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGA 146

Query: 147 EVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK-- 204
            +       +  +++D D +E   + +T  ++I +P NP G VYS + ++KL++   K  
Sbjct: 147 RLVEVPADTE-HFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKS 205

Query: 205 ----LKTLVIADEVYGHLVFGDK--PFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
                   +IADE Y  +V+     PFV    + +T+      S SK   +PG R+G+ +
Sbjct: 206 KEIGRPIFIIADEPYREIVYDGIKVPFVT-KYYDNTL---VCYSYSKSLSLPGERIGYVL 261

Query: 259 TTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQ 303
                      +V ++ + Y  + G       VC       ++ Q
Sbjct: 262 V--------PDEVYDKAELYAAVCGAGRALGYVCA-----PSLFQ 293

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} Length = 376

 Score =  138 bits (350), Expect = 5e-38
 Identities = 59/252 (23%), Positives = 98/252 (38%), Gaps = 26/252 (10%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
           K+ + L +G+P       T     +A+         N Y  +A     R A   +  R  
Sbjct: 23  KRGLDLGIGEP-QFE---TPKFIQDALKNHT--HSLNIYPKSAFEESLRAAQRGFFKRRF 76

Query: 95  PYKLTPNDVFVTSGCTQAI-DVAMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFD 152
             +L  N++  T G  + + +    +L       I  P P + IYE +A F   +     
Sbjct: 77  KIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMP 136

Query: 153 LLPDKGWEVDLDDIESLADQNTVALVIIN-PGNPCGNVYSYQHLQKLAETANKLKTLVIA 211
           L  +  +   L++     +   V LVI+N P NP G   S + L    + A K   ++I 
Sbjct: 137 LTKENDFTPSLNE----KELQEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILIN 192

Query: 212 DEVYGHLVFGDKP-----FVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF 266
           DE Y  +     P        +    +   +L + SLSKR   PG R G F+  D     
Sbjct: 193 DECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSG-FIAGD----- 246

Query: 267 RKPKVVERMKKY 278
              +++E+ K +
Sbjct: 247 --SRLLEKYKAF 256

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides} Length = 407

 Score =  136 bits (345), Expect = 4e-37
 Identities = 47/234 (20%), Positives = 86/234 (36%), Gaps = 14/234 (5%)

Query: 32  KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLS 91
             E + +  + GD   H    T        A    S     Y    G    R  +A  L+
Sbjct: 36  PIEGRPVDFSHGDVDAHE--PTPGAFDLFSAGVQ-SGGVQAYTEYRGDLGIRDLLAPRLA 92

Query: 92  RD--LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF-----R 144
                P     + + +T G   A+ +A+A     G  + + +P +        F      
Sbjct: 93  AFTGAPVD-ARDGLIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMV 151

Query: 145 HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK 204
            +++ +     +    +DL  +E          +  NP NP G VYS + + ++A  A +
Sbjct: 152 PVQLDYVSA-DETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAAR 210

Query: 205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLGW 256
               VIAD++Y  L +    +  +    +     ++T+   SK   + G+RLG 
Sbjct: 211 YGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGV 264

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus} Length = 376

 Score =  135 bits (342), Expect = 6e-37
 Identities = 55/258 (21%), Positives = 98/258 (37%), Gaps = 22/258 (8%)

Query: 28  VDDEKNEKK-----VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT 82
           VD+ K + +     +I L++G               +A+AEAL      GY   +     
Sbjct: 13  VDEAKRKARERGVGLIDLSIGSTD----LPPPEAPLKALAEALNDPTTYGYCLKSCTLPF 68

Query: 83  RRAIAEYLSRDLPYKLTPND-VFVTSGCTQAID-VAMALLSRPGANILLPRPGFPIYELS 140
               A +        L P        G  + +  + +AL   P   +LLP   +P Y  +
Sbjct: 69  LEEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLALTE-PEDLLLLPEVAYPSYFGA 127

Query: 141 AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAE 200
           A    +      L  D     DL  +     +    L++  P NP G V  + + ++   
Sbjct: 128 ARVASLRTFLIPLRED--GLADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALG 185

Query: 201 TANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT 260
            A K    +I D  Y   V+  +   P+ + G+   ++ L SLSK + + G+RLG+    
Sbjct: 186 LARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFA--- 242

Query: 261 DPCGMFRKPKVVERMKKY 278
              G     + + R+++ 
Sbjct: 243 --LG---SEEALARLERV 255

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4} Length = 444

 Score =  136 bits (345), Expect = 8e-37
 Identities = 55/279 (19%), Positives = 90/279 (32%), Gaps = 47/279 (16%)

Query: 35  KKVISLAMGDP----TVHSCFH--TTHVATEAVAEALLSEKFNG---YAPTAGLPLTRRA 85
           + V  L  G+P     V+  F      +  +       S        Y+   G      A
Sbjct: 32  QPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDA 91

Query: 86  IAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN---------------ILLP 130
           +  + +R   + LT  ++ +T+G   A      L      N               +L  
Sbjct: 92  LVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPL 151

Query: 131 RPGF----PIYELSAAF-----RHIEVRHFDLLPDKGWEVDLDDIESLA---DQNTVALV 178
            P +     ++     F        EV H        + VD + +E+L    +    A+ 
Sbjct: 152 TPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAIC 211

Query: 179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPIL 238
              P NP GNV + + +  LAE A +    +I D  YG              + +    +
Sbjct: 212 CSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWDNNT--I 269

Query: 239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK 277
              SLSK   +PG R G  V           KV+E +  
Sbjct: 270 LCFSLSK-IGLPGMRTGIIVA--------DAKVIEAVSA 299

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii} Length = 370

 Score =  134 bits (341), Expect = 8e-37
 Identities = 52/226 (23%), Positives = 98/226 (43%), Gaps = 17/226 (7%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
           E   KKVI L +G+P     F+T     +   ++L  E    Y  + G+   R  I+E  
Sbjct: 25  ESEGKKVIHLEIGEPD----FNTPKPIVDEGIKSL-KEGKTHYTDSRGILELREKISELY 79

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
                  + P+++ +T G +  +  A++ +   G  +L+  P +P Y+    F   +   
Sbjct: 80  KDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVF 139

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
            D           + +E      T A++I +P NP G V      +++ E A +    +I
Sbjct: 140 CDFTV--------ESLEEALSDKTKAIIINSPSNPLGEVID----REIYEFAYENIPYII 187

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW 256
           +DE+Y  LV+  K +  +    +    + +   SK + + GWR+G+
Sbjct: 188 SDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGY 233

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa} Length = 412

 Score =  135 bits (342), Expect = 1e-36
 Identities = 59/259 (22%), Positives = 108/259 (41%), Gaps = 21/259 (8%)

Query: 28  VDDEKNEKK-----VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT 82
             + K   +     +I L+MG+P       T     E +      E  +GY+ + G+P  
Sbjct: 25  TAELKMAARRRGEDIIDLSMGNPD----GPTPPHIVEKLCTVAQREDTHGYSTSRGIPRL 80

Query: 83  RRAIAEYLSRDLPYKLTPND-VFVTSGCTQAID-VAMALLSRPGANILLPRPGFPIYELS 140
           RRAI+ +       ++ P     VT G  + +  + +A L   G  IL+P P +PI+   
Sbjct: 81  RRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLD-HGDTILVPNPSYPIHIYG 139

Query: 141 AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAE 200
           A     +VR   L+P   +  +L+     +      +++  P NP          +++  
Sbjct: 140 AVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVA 199

Query: 201 TANKLKTLVIADEVYGHLVF-GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT 259
            A +   +V+ D  Y  +V+ G K    M V G+    +   +LSK + + GWR+G+   
Sbjct: 200 LAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFM-- 257

Query: 260 TDPCGMFRKPKVVERMKKY 278
               G    P++V  + + 
Sbjct: 258 ---VG---NPELVSALARI 270

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A* Length = 432

 Score =  135 bits (342), Expect = 2e-36
 Identities = 54/251 (21%), Positives = 88/251 (35%), Gaps = 42/251 (16%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
           +  + +VISL +GD T       T    +   E    E ++GY    G    R AIA+  
Sbjct: 52  KYPDAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTF 111

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF------- 143
                  +  +DVFV+ G    I   + ++      I +  P +P Y  S+         
Sbjct: 112 YGG--LGIGDDDVFVSDGAKCDIS-RLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQF 168

Query: 144 -----RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN-PGNPCGNVYSYQHLQK 197
                ++  + +    P+ G+  DL  +          ++    P NP G   + + L +
Sbjct: 169 NTDVQKYGNIEYMRCTPENGFFPDLSTVG------RTDIIFFCSPNNPTGAAATREQLTQ 222

Query: 198 LAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT----------LGSLSKRW 247
           L E A K  ++++ D  Y   +  D P            I              S S   
Sbjct: 223 LVEFAKKNGSIIVYDSAYAMYMSDDNP----------RSIFEIPGAEEVAMETASFSNYA 272

Query: 248 IVPGWRLGWFV 258
              G RLGW V
Sbjct: 273 GFTGVRLGWTV 283

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm} Length = 533

 Score =  135 bits (342), Expect = 6e-36
 Identities = 65/269 (24%), Positives = 101/269 (37%), Gaps = 37/269 (13%)

Query: 9   DNTGSIITIKGMLSLLMQSVDDEKNEKK-----VISLAMGDPTVHSCFHTTHVATEAVAE 63
                 I   G+   L   +D +KN++       ++    +       +   V  E V  
Sbjct: 72  GIMAGYINTDGIRERLFAFLDPDKNDEDKFLIDAVNYCHTELG----LNRDKVVAEWVNG 127

Query: 64  ALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKL---TPNDVFVTSGCTQAIDVA-MAL 119
           A+     N   P   L  T + I  +L              D+F T G T AI  A  +L
Sbjct: 128 AV---ANNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSL 184

Query: 120 LSR----PGANILLPRPGFPIY----ELS-AAFRHIEVRHFDLLPDKGWEVDLDDIESLA 170
                   G  I +  P F  Y    EL       +++  +       WE++ ++IE L 
Sbjct: 185 AENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSY---EKNDWEIEPNEIEKLK 241

Query: 171 DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTL-VIADEVYGHLVFGDKPFVPMG 229
           D +  AL+++NP NP    +    L  + +   K   L +I+DEVYG  V   K    + 
Sbjct: 242 DPSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSV- 300

Query: 230 VFGSTVP--ILTLGSLSKRWIVPGWRLGW 256
                VP   + + S SK +   GWRLG 
Sbjct: 301 -----VPYNTMLVYSYSKLFGCTGWRLGV 324

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A* Length = 400

 Score =  133 bits (336), Expect = 8e-36
 Identities = 47/241 (19%), Positives = 85/241 (35%), Gaps = 33/241 (13%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
           E  +  VI+L++GD T             ++A         GY P  GLP  R+ ++E  
Sbjct: 29  ENPQHTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDF 88

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF-RHIEVR 149
            R     +   ++F++ G    +   ++    P   + +  P +P Y   A      E+ 
Sbjct: 89  YRGF---VDAKEIFISDGAKVDLFRLLSFFG-PNQTVAIQDPSYPAYLDIARLTGAKEII 144

Query: 150 HFDLLPDKGWEVDLDDIESLADQNTVALVIIN-PGNPCGNVYSYQHLQKLAETANKLKTL 208
               L +  +  +  +         + ++ +  P NP G V +   L+ +   A + + L
Sbjct: 145 ALPCLQENAFFPEFPEDTH------IDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEIL 198

Query: 209 VIADEVYGHLVF-GDKPFVPMGVFGSTVPIL----------TLGSLSKRWIVPGWRLGWF 257
           ++ D  Y   +     P            I            + S SK     G RLGW 
Sbjct: 199 ILFDAAYSTFISDPSLP----------KSIFEIPDARFCAIEINSFSKPLGFAGIRLGWT 248

Query: 258 V 258
           V
Sbjct: 249 V 249

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus} Length = 404

 Score =  131 bits (332), Expect = 4e-35
 Identities = 50/236 (21%), Positives = 89/236 (37%), Gaps = 11/236 (4%)

Query: 28  VDDEKNEKK---VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRR 84
               K E     +I++A+G P       T     +   +AL   +   Y    G    ++
Sbjct: 37  TMGRKIEHGPLPLINMAVGIPD----GPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQ 92

Query: 85  AIAEYLSRDLPYKLTPND-VFVTSGCTQAID-VAMALLSRPGANILLPRPGFPIYELSAA 142
           AI ++  R     L   D V +  G    +  V   +++ PG  +LLP PG+  Y     
Sbjct: 93  AIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVIN-PGDYVLLPDPGYTDYLAGVL 151

Query: 143 FRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202
               +    +L P   +  D   ++S     T  + +  P NP G+  + +   +     
Sbjct: 152 LADGKPVPLNLEPP-HYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKF 210

Query: 203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 258
               T ++ D  YG   F  K    +         + + SLSK + + G+R+G+ V
Sbjct: 211 KGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAV 266

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A* Length = 389

 Score =  129 bits (328), Expect = 9e-35
 Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 17/229 (7%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRD- 93
           K VISL +G+P     F T     E   EAL  +    Y P  GL   R AIAE L +  
Sbjct: 26  KDVISLGIGEPD----FDTPQHIKEYAKEAL-DKGLTHYGPNIGLLELREAIAEKLKKQN 80

Query: 94  -LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFD 152
            +       ++ V  G  QA  + ++   + G  +L+P P F  Y  +      +     
Sbjct: 81  GIEAD-PKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVP 139

Query: 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212
              +  + +++D+++      T AL+I +P NP G V + + L+++A+   +   +VI+D
Sbjct: 140 TYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISD 199

Query: 213 EVYGHLVFGDKPFVPMGVFGSTVP-----ILTLGSLSKRWIVPGWRLGW 256
           EVY H ++ D     +     ++       +T+   SK + + GWRLG+
Sbjct: 200 EVYEHFIYDDARHYSIA----SLDGMFERTITVNGFSKTFAMTGWRLGF 244

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii} Length = 449

 Score =  127 bits (321), Expect = 2e-33
 Identities = 51/242 (21%), Positives = 88/242 (36%), Gaps = 31/242 (12%)

Query: 34  EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRD 93
           + K+ISL +GD T     +      +A A     E ++GY    G    R A+A      
Sbjct: 68  DAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFYGH 127

Query: 94  LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF---------- 143
                  +++F++ G    I   + ++      + +  P +P+Y  ++            
Sbjct: 128 --AGRAADEIFISDGSKCDI-ARIQMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGT 184

Query: 144 RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN-PGNPCGNVYSYQHLQKLAETA 202
               + +    PD  +  DL   +         ++    P NP G   +   L +L   A
Sbjct: 185 GFDGIEYMVCNPDNHFFPDLSKAK------RTDIIFFCSPNNPTGAAATRAQLTELVNFA 238

Query: 203 NKLKTLVIADEVYGHLVF-GDKPF----VPMGVFGS-TVPILTLGSLSKRWIVPGWRLGW 256
            K  ++++ D  Y   +   D P     +P    G+  V I    S SK     G RLGW
Sbjct: 239 RKNGSILVYDAAYALYISNPDCPKTIYEIP----GADEVAIE-TCSFSKYAGFTGVRLGW 293

Query: 257 FV 258
            V
Sbjct: 294 TV 295

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1 Length = 388

 Score =  120 bits (304), Expect = 2e-31
 Identities = 58/238 (24%), Positives = 102/238 (42%), Gaps = 35/238 (14%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
             V S + G+P     F+T     EA   AL  +    Y P AG P  R AIA+ L RD 
Sbjct: 30  IDVCSFSAGEPD----FNTPKHIVEAAKAAL-EQGKTRYGPAAGEPRLREAIAQKLQRDN 84

Query: 95  PYKLTPNDVFVTSGCTQAI-DVAMALLSRPGANILLPRP-------------GFPIYELS 140
                 +++ VT+G  Q+I ++ +A++  PG  +++P P             G P+    
Sbjct: 85  GLCYGADNILVTNGGKQSIFNLMLAMIE-PGDEVIIPAPFWVSYPEMVKLAEGTPVI--- 140

Query: 141 AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAE 200
                +         +  ++V  + I       T  LV   P NP G VY+   ++ +A+
Sbjct: 141 -----LPTT-----VETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQ 190

Query: 201 TANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLGW 256
            A +    V++DE+Y  +++ D   + +G          +     +K + + GWR+G+
Sbjct: 191 VAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGF 248

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491} Length = 396

 Score =  120 bits (304), Expect = 2e-31
 Identities = 66/257 (25%), Positives = 110/257 (42%), Gaps = 29/257 (11%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSR-- 92
            + + L +G+P  H    T  V T+A+  +L   +   Y  TAGLP  R+A A +L R  
Sbjct: 30  MEAVPLHIGEP-KHP---TPKVITDALTASL--HELEKYPLTAGLPELRQACANWLKRRY 83

Query: 93  DLPYKLTPND-VFVTSGCTQAI-DVAMALLSR----PGANILLPRPGFPIYELSAAFRHI 146
           D    +  ++ +    G  +A+      +L+         I+ P P + IYE +      
Sbjct: 84  DGL-TVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGG 142

Query: 147 EVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLK 206
           E+ HF   P   +  D   I     + T  + + +P NP G+V      +++ +  +K  
Sbjct: 143 EI-HFANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYG 201

Query: 207 TLVIADEVYGHLVF-GDKPF----VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 261
            ++ +DE Y  + F G+KP         +  S   +L   SLSKR  VPG R G FV  D
Sbjct: 202 FIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSG-FVAGD 260

Query: 262 PCGMFRKPKVVERMKKY 278
                   ++++    Y
Sbjct: 261 -------AELLKNFLLY 270

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A* Length = 385

 Score =  120 bits (304), Expect = 2e-31
 Identities = 69/225 (30%), Positives = 113/225 (50%), Gaps = 13/225 (5%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
             +++L  G+P     F T     EA   AL ++    YAP AG+P  R A+AE   R+ 
Sbjct: 31  VDLVALTAGEPD----FDTPEHVKEAARRAL-AQGKTKYAPPAGIPELREALAEKFRREN 85

Query: 95  PYKLTPNDVFVTSGCTQAI-DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL 153
              +TP +  VT G +QA+ ++  A+L  PG  +++  P +  Y     F    V   + 
Sbjct: 86  GLSVTPEETIVTVGGSQALFNLFQAILD-PGDEVIVLSPYWVSYPEMVRFAGGVVVEVET 144

Query: 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
           LP++G+  D + +       T ALV+ +P NP G VY  + L+ LA  A +    +++DE
Sbjct: 145 LPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDE 204

Query: 214 VYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLGW 256
           +Y HL++  + F P    G   P   LT+   +K + + GWR+G+
Sbjct: 205 IYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMTGWRIGY 245

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis} Length = 407

 Score =  120 bits (302), Expect = 5e-31
 Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 22/248 (8%)

Query: 23  LLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN-GYAPTAGLPL 81
           ++ ++ + +K   K+ISLA GDP          +  E   E L  E  +  Y P  G+P 
Sbjct: 22  VMKKASELQKKGVKLISLAAGDPDPEL-IPRAVLG-EIAKEVLEKEPKSVMYTPANGIPE 79

Query: 82  TRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA 141
            R  +A +L +    +++P ++ +T G T A+D+   +L  PG  ++   P +    ++ 
Sbjct: 80  LREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSY----INT 135

Query: 142 --AFRHIEVRHFDLLP--DKGWEVDLDDIESL-----ADQNTVALVIINP--GNPCGNVY 190
             AF  +  +  + +P  + G  + +D +E       A    V L+   P   NP G   
Sbjct: 136 LLAFEQLGAK-IEGVPVDNDG--MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTM 192

Query: 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP 250
           S +  + L E A+K   L+I D  Y  + +     VP+    +   ++  G+LSK  +  
Sbjct: 193 SMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKV-LGT 251

Query: 251 GWRLGWFV 258
           G+R+GW +
Sbjct: 252 GFRIGWII 259

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A* Length = 546

 Score =  121 bits (305), Expect = 8e-31
 Identities = 46/240 (19%), Positives = 82/240 (34%), Gaps = 35/240 (14%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIA-EYLSRD 93
            K +S                   E V   L       Y     +      I  +Y+ R+
Sbjct: 104 GKSLSYVRDQLG----LDPAAFLHEMVDGILG----CNYPVPPRMLNISEKIVRQYIIRE 155

Query: 94  LPYKLTPN---DVFVTSGCTQAI-----DVAMALLSRPGANILLPRPGF----PIYELS- 140
           +     P+   ++F   G T A+      + +  L + G  + +  P F     I EL+ 
Sbjct: 156 MGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQ 215

Query: 141 AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAE 200
            A   + +      P   W+    +++ L D        +NP NP       + L+++  
Sbjct: 216 YALEEVAIN---ADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRN 272

Query: 201 TANKLKT--LVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLGW 256
              + +   +++ D+VYG        F       +  P   L + S SK +   GWRLG 
Sbjct: 273 IVAEHRPDLMILTDDVYGTFADD---FQS---LFAICPENTLLVYSFSKYFGATGWRLGV 326

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1 Length = 389

 Score =  118 bits (299), Expect = 1e-30
 Identities = 63/231 (27%), Positives = 101/231 (43%), Gaps = 23/231 (9%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
           + VI+L  G+P     F T     E     L  +    Y    G+   R  IA+ +    
Sbjct: 41  EDVINLTAGEPD----FPTPEPVVEEAVRFL-QKGEVKYTDPRGIYELREGIAKRIGERY 95

Query: 95  PYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGF----PIYELSAAFRHIEVRH 150
              ++P+ V VT+G  QA+  A   L  PG  +++  P +    P   L+       V  
Sbjct: 96  KKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGG-TVNVV-- 152

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
            +    K ++  L+++E L    T A++I +P NP G VY  + L+ L   A K    +I
Sbjct: 153 -ETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYII 211

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVP-----ILTLGSLSKRWIVPGWRLGW 256
           +DEVY  LV+ D+ F  +      V      I+ +   SK   + GWR+G+
Sbjct: 212 SDEVYDSLVYTDE-FTSIL----DVSEGFDRIVYINGFSKSHSMTGWRVGY 257

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A* Length = 397

 Score =  118 bits (297), Expect = 2e-30
 Identities = 64/295 (21%), Positives = 115/295 (38%), Gaps = 58/295 (19%)

Query: 35  KKVISLAMGDPTVHSCF-------HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIA 87
             ++S A G P     F           +  E    AL       Y+PT G    R  +A
Sbjct: 32  PGILSFAGGLPAPEL-FPKEEAAEAAARILREKGEVAL------QYSPTEGYAPLRAFVA 84

Query: 88  EYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA--AFRH 145
           E++       + P +V +T+G  QA+D+   +    G+ +LL  P +    + A  AFR 
Sbjct: 85  EWIG------VRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSY----MGAIQAFRL 134

Query: 146 IEVRHFDLLP--DKGWEVDLDDIESLADQNTVALVIINP--GNPCGNVYSYQHLQKLAET 201
              R F  +P  ++G   DLD +E +  +     + + P   NP G +      ++L + 
Sbjct: 135 QGPR-FLTVPAGEEG--PDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQM 191

Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVF---GSTVPILTLGSLSKRWIVPGWRLGWFV 258
             +   +V+ D+ Y  L FG+     +           ++ LGS SK  + PG R+ + V
Sbjct: 192 VMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSK-VLSPGLRVAFAV 250

Query: 259 TTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLEN 313
                   +K   + + K+  D+                   + Q+++H   L+ 
Sbjct: 251 AHPE--ALQK---LVQAKQGADL---------------HTPMLNQMLVH-ELLKE 284

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A* Length = 427

 Score =  116 bits (291), Expect = 2e-29
 Identities = 38/268 (14%), Positives = 75/268 (27%), Gaps = 47/268 (17%)

Query: 37  VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT----RRAIAEYLSR 92
              +A GD      +   H    AV  +        Y              + I E    
Sbjct: 58  SADVASGDGLFLEEYWKQHKEASAVLVS--PWHRMSYFFNPVSNFISFELEKTIKELHEV 115

Query: 93  DLPYKLTPNDVFVTSGCTQAIDVAMALLS--------RPGANILLPRPGFPIYELSAAFR 144
                     +    G TQ I   +  LS         P + ++   P +P++       
Sbjct: 116 VGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFR------ 169

Query: 145 HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK 204
             + ++FD      W  +  +  ++++      ++ +P NP G +               
Sbjct: 170 -EQTKYFDK-KGYVWAGNAANYVNVSNPEQYIEMVTSPNNPEGLLRH------------- 214

Query: 205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG 264
              +     +Y  + +    + P  +       + L ++SK     G R GW +  D   
Sbjct: 215 -AVIKGCKSIYDMVYYWPH-YTP--IKYKADEDILLFTMSKFTGHSGSRFGWALIKD--- 267

Query: 265 MFRKPKVVERMKKYFD-ILGDPATFIQV 291
                 V   +  Y            Q+
Sbjct: 268 ----ESVYNNLLNYMTKNTEGTPRETQL 291

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1 Length = 425

 Score =  115 bits (290), Expect = 3e-29
 Identities = 54/242 (22%), Positives = 91/242 (37%), Gaps = 30/242 (12%)

Query: 35  KKVISLAMGDPTVHSCF-------HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIA 87
           K  IS   G P   + F           +  +     L       Y+ T G P+ ++ I 
Sbjct: 43  KDAISFGGGVPDPET-FPRKELAEIAKEIIEKEYHYTL------QYSTTEGDPVLKQQIL 95

Query: 88  EYLSRDL-PYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA--AFR 144
           + L R      L  +++  T G  QA+D+   L     +  +L  P +    L A  AFR
Sbjct: 96  KLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAY----LGAINAFR 151

Query: 145 HIEVRHFDL-LPDKGWEVD-----LDDIESLADQNTVALVIINP--GNPCGNVYSYQHLQ 196
                   + L D G +++     L + +       V  + +     NP G   S +  +
Sbjct: 152 QYLANFVVVPLEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRK 211

Query: 197 KLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW 256
            L E A K    ++ D+ YG L +  +   P+   G    ++ L + SK  + PG R+G 
Sbjct: 212 ALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSK-VLAPGLRIGM 270

Query: 257 FV 258
             
Sbjct: 271 VA 272

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A* Length = 448

 Score =  111 bits (281), Expect = 7e-28
 Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 34/242 (14%)

Query: 35  KKVISLAMGDPTVHSCF-------HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIA 87
             +ISLA G P   + F           +  +   +AL       Y  T G    R  + 
Sbjct: 76  SDIISLAGGLPNPKT-FPKEIIRDILVEIMEKYADKAL------QYGTTKGFTPLRETLM 128

Query: 88  EYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA--AFRH 145
           ++L +        ND+ +TSG  QA+D+   +   PG  +++  P +    L+A  AF  
Sbjct: 129 KWLGKRYG-ISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTY----LAALQAFNF 183

Query: 146 IEVRHFDLLP--DKGWEVDLDDIESL-----ADQNTVALVIINP--GNPCGNVYSYQHLQ 196
            E + +  +P  D+G  + ++ +E       +    V +V   P   NP G   +    +
Sbjct: 184 YEPQ-YIQIPLDDEG--MKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRK 240

Query: 197 KLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW 256
            L E A++   +V+ D+ YG L +   P   +    +   ++ LG+ SK  + PG+R+GW
Sbjct: 241 YLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSK-ILAPGFRIGW 299

Query: 257 FV 258
            V
Sbjct: 300 MV 301

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A* Length = 391

 Score =  107 bits (269), Expect = 1e-26
 Identities = 38/254 (14%), Positives = 77/254 (30%), Gaps = 42/254 (16%)

Query: 37  VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT-----RRAIAEYLS 91
           V++L  GDPT +  +         V      +  + ++    L          AI +   
Sbjct: 24  VVNLDHGDPTAYEEYWRKMGDRCTVTIRGC-DLMSYFSDMTNLCWFLEPELEDAIKDLHG 82

Query: 92  RDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA----NILLPRPGFPIYELSAAFRHIE 147
                      + V +G TQ    A+  LS        +++   P +  Y     +    
Sbjct: 83  VVGNAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSG 142

Query: 148 VRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207
           +  ++            D      +     ++ +P NP G +      + +    +  + 
Sbjct: 143 MYKWEG-----------DAWGFDKKGPYIELVTSPNNPDGTI-----RETVVNRPDDDEA 186

Query: 208 LVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRWIVPGWRLGWFVTTDPCGMF 266
            VI D  Y    +                  + L + SK     G R+GW        + 
Sbjct: 187 KVIHDFAYYWPHYTPIT--------RRQDHDIMLFTFSKITGHAGSRIGW-------ALV 231

Query: 267 RKPKVVERMKKYFD 280
           +  +V ++M +Y  
Sbjct: 232 KDKEVAKKMVEYII 245

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300} Length = 423

 Score =  107 bits (269), Expect = 3e-26
 Identities = 55/327 (16%), Positives = 96/327 (29%), Gaps = 58/327 (17%)

Query: 17  IKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK----FNG 72
            +  L L  Q+ +  K     +++  G P     F  ++     +    +        N 
Sbjct: 7   SRPALDLARQAYEAFKARGLNLNMQRGQPADAD-FDLSNGLLTVLGAEDVRMDGLDLRNY 65

Query: 73  YAPTAGLPLTRRAIAEYLSRDLPY-------KLTPNDVFVTSGCTQAIDVAMALLSRPGA 125
               AGLP  R   A YL              L    + +T      +  +         
Sbjct: 66  PGGVAGLPSARALFAGYLDVKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTP 125

Query: 126 NILLPRPGFPIYELSAAFRHIEVRHFDLLP----DKGWEVDLDDIES-LADQNTVALVII 180
            +++  PG+        F  ++   F+LL       G   D+D +E       +V  ++ 
Sbjct: 126 KMIVTVPGYD-----RHFLLLQTLGFELLTVDMQSDG--PDVDAVERLAGTDPSVKGILF 178

Query: 181 NP--GNPCGNVYSYQHLQKLAE-TANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP- 236
            P   NP G   S +  ++LA   A      + AD+ Y      ++       F      
Sbjct: 179 VPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARD 238

Query: 237 ------ILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFI 289
                      S SK  I   G  LG+  +            +  + KY           
Sbjct: 239 AGYPDRAFVFASTSK--ITFAGAGLGFVAS--------SEDNIRWLSKYL---------- 278

Query: 290 QVCIMYGCLSTIMQIMIHGNFLENFAG 316
               +    + + Q   H  FL  + G
Sbjct: 279 GAQSI--GPNKVEQ-ARHVKFLTEYPG 302

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A* Length = 425

 Score =  107 bits (269), Expect = 3e-26
 Identities = 68/334 (20%), Positives = 112/334 (33%), Gaps = 74/334 (22%)

Query: 16  TIKGMLSLLMQSVDDEKNEKKVISLAMGDP-----------TVHSCFHTTHVATEAVAEA 64
            I+ M  +L +          +ISLA G P                  T     E +  A
Sbjct: 18  PIRTMTDILSRGPKS------MISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMKRA 71

Query: 65  LLSEKFNGYAPTAGLPLTRRAIAEYLSR-------DLPYKLTPNDVFVTSGCTQAIDVAM 117
           L       Y+P+AG+P     + +   +         P      D+ VTSG  Q +    
Sbjct: 72  L------QYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVF 125

Query: 118 ALLSRPGANILLPRPGFPIYELSA--AFRHIEVRHFDLLPDK-GWEVDLDDIESL----- 169
            ++  PG N+LL  P +         +   +     ++  D+ G  +  D +  +     
Sbjct: 126 EMIINPGDNVLLDEPAY----SGTLQSLHPLGCNIINVASDESG--IVPDSLRDILSRWK 179

Query: 170 ------ADQNTVALVIINP--GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG 221
                   +NT   +   P   NP GN  + +  +++ E A K   L+I D+ Y  L F 
Sbjct: 180 PEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFN 239

Query: 222 DKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI 281
                          ++   S SK  I  G R+G+              ++ER+      
Sbjct: 240 KFRVPTFLSMDVDGRVIRADSFSKI-ISSGLRIGFLTGP--------KPLIERV------ 284

Query: 282 LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFA 315
                  IQV  +    ST  Q+MI    L  + 
Sbjct: 285 ----ILHIQVSTL--HPSTFNQLMISQ-LLHEWG 311

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus} Length = 430

 Score =  107 bits (268), Expect = 3e-26
 Identities = 42/240 (17%), Positives = 88/240 (36%), Gaps = 20/240 (8%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRD- 93
               +  +G  T            +A+   L  ++   YAP  G+   R    + + RD 
Sbjct: 47  STTYNATIGMATNKDGKMFASSL-DAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDN 105

Query: 94  --LPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRH-IEVRH 150
             L      +   VT+  T  + +   L       ILLP   +  Y+L    R+   ++ 
Sbjct: 106 PELSID-NMSRPIVTNALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQT 164

Query: 151 FDLLPDKGWEVDLDDIE---SLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT 207
           + +  DK      D +       +++ V +++  P NP G   +++ +  + E    L  
Sbjct: 165 YPIF-DKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALAN 223

Query: 208 -----LVIADEVYGHLVFGDKPFVPM-----GVFGSTVPILTLGSLSKRWIVPGWRLGWF 257
                + + D+ Y  L + D     +      +  + +  + L   +K +   G+R+G+ 
Sbjct: 224 KGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFM 283

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} Length = 361

 Score = 98.0 bits (245), Expect = 3e-23
 Identities = 43/204 (21%), Positives = 80/204 (39%), Gaps = 37/204 (18%)

Query: 83  RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA 142
            ++I  Y       KL    + + +G ++ I+    L       IL+  P +  YE++A 
Sbjct: 67  NKSIENY------LKLKDIGIVLGNGASEIIE----LSISLFEKILIIVPSYAEYEINAK 116

Query: 143 FRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII-NPGNPCGNVYSYQHLQKLAET 201
              + V    L  D+   +D +DI S  D      VII NP NP G + + +    + + 
Sbjct: 117 KHGVSVVFSYL--DENMCIDYEDIISKIDDVD--SVIIGNPNNPNGGLINKEKFIHVLKL 172

Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT-------LGSLSKRWIVPGWRL 254
           A + K  +I DE +                 S V  +        + +++K + +PG R 
Sbjct: 173 AEEKKKTIIIDEAFIEFTGDPSS--------SFVGEIKNYSCLFIIRAMTKFFAMPGIRF 224

Query: 255 GWFVTTDPCGMFRKPKVVERMKKY 278
           G+       G+    ++  ++K  
Sbjct: 225 GY-------GITNNKEIAAKIKAK 241

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae} Length = 422

 Score = 97.4 bits (243), Expect = 8e-23
 Identities = 51/331 (15%), Positives = 95/331 (28%), Gaps = 68/331 (20%)

Query: 17  IKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN---GY 73
           +  +   +     + K +   + L  G P+       ++           ++       Y
Sbjct: 14  LAQVREEVTAKYAELKAKNLSLDLTRGKPSA-EQLDLSNDLLSLPGGDFRTKDGVDCRNY 72

Query: 74  APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID---VAMALLSR-------- 122
               G+   R   AE L          + V    G +  I    ++ +            
Sbjct: 73  GGLLGIADIRELWAEALGLP------ADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPW 126

Query: 123 ---PGANILLPRPGFPIYELSA--AFRHIEVRHFDLLP--DKGWEVDLDDIESLADQNTV 175
                   L P PG+            H        +P  D+G   D+  +  L     V
Sbjct: 127 SAEEKVKWLCPVPGY----DRHFTITEHFGFE-MINVPMTDEG--PDMGVVRELVKDPQV 179

Query: 176 ALVIINP--GNPCGNVYSYQHLQKLAETANKLK-TLVIADEVYGHLVFGDKPFVPMGVFG 232
             +   P  GNP G  +S Q  ++LAE +       ++ D  Y      D+  +   V  
Sbjct: 180 KGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIE 239

Query: 233 STVP------ILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDP 285
                        + S SK  I   G  + +F ++         + +E    +       
Sbjct: 240 FAQAAGNPNRFWFMSSTSK--ITHAGSGVSFFASS--------KENIEWYASHA------ 283

Query: 286 ATFIQVCIMYGCLSTIMQIMIHGNFLENFAG 316
                V  +    + + Q + H  F  + AG
Sbjct: 284 ----NVRGI--GPNKLNQ-LAHAQFFGDVAG 307

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A* Length = 364

 Score = 96.1 bits (240), Expect = 1e-22
 Identities = 51/224 (22%), Positives = 94/224 (41%), Gaps = 25/224 (11%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA 116
              A+ + L  +    Y P A      +A+A +      +++  + +   +G T++I   
Sbjct: 42  VKRALIDNL--DCIERY-PDADYFHLHQALARH------HQVPASWILAGNGETESIFTV 92

Query: 117 MALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176
            + L       ++  PGF  Y  + A    E+R + L    GW++    +E+L     + 
Sbjct: 93  ASGL--KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALTPD--LD 148

Query: 177 LVII-NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235
            + +  P NP G +     LQ +A+    L   +I DE +   +  +  F+P        
Sbjct: 149 CLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIP---ALKDN 205

Query: 236 P-ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY 278
           P I  L SL+K + +PG RLG+ V +D          + RM++ 
Sbjct: 206 PHIWVLRSLTKFYAIPGLRLGYLVNSD-------DAAMARMRRQ 242

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} Length = 367

 Score = 95.3 bits (238), Expect = 3e-22
 Identities = 40/174 (22%), Positives = 74/174 (42%), Gaps = 13/174 (7%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA 116
               +A  L     N Y P       R  + E +           +V + +G  + I + 
Sbjct: 48  LRSELAARLGEVALNRY-PVPSSEALRAKLKEVMQVP-----AGMEVLLGNGSDEIISML 101

Query: 117 MALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176
               +RPGA ++ P PGF +Y +SA F  +E     L  D  + +D   + +   ++  A
Sbjct: 102 ALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRAD--FTLDRGAMLAAMAEHQPA 159

Query: 177 LVII-NPGNPCGNVYSYQHLQKLAETA--NKLKTLVIADEVYGHLVFGDKPFVP 227
           +V +  P NP GN++    ++ +   A  +  ++LV+ DE Y    F  + ++ 
Sbjct: 160 IVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQP--FAQESWMS 211

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A Length = 369

 Score = 92.7 bits (231), Expect = 2e-21
 Identities = 41/205 (20%), Positives = 83/205 (40%), Gaps = 11/205 (5%)

Query: 57  ATEAVAEAL--LSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114
               +   +  ++ + N Y     + L R  +A Y+++     +T ++++  +G  + + 
Sbjct: 48  LVADLVATVDKIATELNRYPERDAVEL-RDELAAYITKQTGVAVTRDNLWAANGSNEILQ 106

Query: 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT 174
             +     PG   L  +P + ++ + A   H E        D  + +D+D          
Sbjct: 107 QLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGAD--FRIDMDVALEEIRAKQ 164

Query: 175 VALVII-NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233
             +V +  P NP G+V S   ++++   A     +VI DE Y    F   P     +   
Sbjct: 165 PDIVFVTTPNNPTGDVTSLDDVERIINVAP---GIVIVDEAYAE--FSPSPSATTLLEKY 219

Query: 234 TVPILTLGSLSKRWIVPGWRLGWFV 258
              ++   ++SK +   G RLG+FV
Sbjct: 220 PTKLVVSRTMSKAFDFAGGRLGYFV 244

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum} Length = 427

 Score = 91.3 bits (227), Expect = 1e-20
 Identities = 45/331 (13%), Positives = 84/331 (25%), Gaps = 67/331 (20%)

Query: 17  IKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN---GY 73
           I      + +  D+ K++   + L  G P+         +          +        Y
Sbjct: 15  IGLFHEDIKRKFDELKSKNLKLDLTRGKPSSEQLDFADELLALPGKGDFKAADGTDVRNY 74

Query: 74  APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI--------------DVAMAL 119
               G+   R+  A+ L            V      +  I              D     
Sbjct: 75  GGLDGIVDIRQIWADLLGVP------VEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPW 128

Query: 120 LSRPGANILLPRPGFPIYELSA--AFRHIEVRHFDLLP--DKGWEVDLDDIESLADQNTV 175
                   + P PG+                     +P  + G   D+D +E L     V
Sbjct: 129 SKEETVKWICPVPGY----DRHFSITERFGFE-MISVPMNEDG--PDMDAVEELVKNPQV 181

Query: 176 ALVIINP--GNPCGNVYSYQHLQKLAETANKLKT-LVIADEVYGHLVFGDKPFVPMGVF- 231
             + + P   NP G   +    ++L+          V+ D  Y      D+    + +  
Sbjct: 182 KGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVG 241

Query: 232 -----GSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDP 285
                G+        S SK  I   G  + +F+T       +             I    
Sbjct: 242 LGEAAGNPNRFWAFTSTSK--ITLAGAGVSFFLT--SAENRKW---YTGHAGIRGI---- 290

Query: 286 ATFIQVCIMYGCLSTIMQIMIHGNFLENFAG 316
                        + + Q + H  +  +  G
Sbjct: 291 -----------GPNKVNQ-LAHARYFGDAEG 309

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis} Length = 350

 Score = 87.2 bits (217), Expect = 1e-19
 Identities = 37/196 (18%), Positives = 67/196 (34%), Gaps = 29/196 (14%)

Query: 83  RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA 142
           R+ +A+         +  N + VT+G T A           G+  L+  P F  YE +  
Sbjct: 56  RQMLAKR------NSVDNNAILVTNGPTAAFYQIAQAF--RGSRSLIAIPSFAEYEDACR 107

Query: 143 FRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202
               EV  +            +DI      N     + NP NP G +     + +L    
Sbjct: 108 MYEHEVCFYPS---------NEDIGEADFSNMDFCWLCNPNNPDGRLLQRTEILRLLNDH 158

Query: 203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP 262
               T  + D+ Y    F  +  +          ++ + S S  + +PG R+G+ V    
Sbjct: 159 P--DTTFVLDQSYVS--FTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVA--- 211

Query: 263 CGMFRKPKVVERMKKY 278
                    ++R+  +
Sbjct: 212 -----NKDFMKRVAAF 222

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica} Length = 354

 Score = 85.3 bits (212), Expect = 7e-19
 Identities = 42/205 (20%), Positives = 83/205 (40%), Gaps = 19/205 (9%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA 116
           A  A  +A+   K N YA    L L    +A +      +++    + +T+G ++ I  A
Sbjct: 34  AQAAARDAV--VKANRYAKNEILML-GNKLAAH------HQVEAPSILLTAGSSEGIRAA 84

Query: 117 MALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176
           +   +   A +++P   +   E  A    ++V    +L +  W  D++ +++     +  
Sbjct: 85  IEAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLDN--WAFDIEGLKAAVAAYSGP 142

Query: 177 -LVII-NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV--FG 232
            +V + NP NP G +     ++    +     T+ I DE Y    F + P          
Sbjct: 143 SIVYLVNPNNPTGTITPADVIEPWIASKPA-NTMFIVDEAYAE--FVNDPRFRSISPMIT 199

Query: 233 STVP-ILTLGSLSKRWIVPGWRLGW 256
                I+ L + SK   + G R+G+
Sbjct: 200 QGAENIILLKTFSKIHAMAGMRVGY 224

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A* Length = 392

 Score = 84.9 bits (211), Expect = 1e-18
 Identities = 34/182 (18%), Positives = 80/182 (43%), Gaps = 4/182 (2%)

Query: 85  AIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFR 144
           A+ ++   +  Y     D+    G   AI +A+   ++ G  +L+  P +P +  S    
Sbjct: 74  AVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRLN 133

Query: 145 HIEVRHFDLLPDKG-WEVDLDDIES-LADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202
           + ++    L  + G +++D + +E+ + + +    ++ NP NP G V+  + L+++    
Sbjct: 134 NRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLC 193

Query: 203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLGWFVTT 260
            K   ++++DE++  L       V             L L S +K + + G +  + +  
Sbjct: 194 QKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIE 253

Query: 261 DP 262
           +P
Sbjct: 254 NP 255

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans} Length = 421

 Score = 85.3 bits (212), Expect = 1e-18
 Identities = 35/182 (19%), Positives = 77/182 (42%), Gaps = 4/182 (2%)

Query: 85  AIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFR 144
           A+ ++  ++  Y +   D+    G   AI +A+   S  G  +L+  P +  +  +    
Sbjct: 104 AVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFARTIRLN 163

Query: 145 HIEVRHFDLLPDKG-WEVDLDDIES-LADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202
              +    L    G +E+D + +E  + D N    ++ +P NP G V+    L K+AE  
Sbjct: 164 DHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELC 223

Query: 203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLGWFVTT 260
            K   ++++DE++  L         +    ++     + L S +K + + G +  + +  
Sbjct: 224 KKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQ 283

Query: 261 DP 262
           + 
Sbjct: 284 NE 285

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} Length = 391

 Score = 84.5 bits (210), Expect = 2e-18
 Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 4/182 (2%)

Query: 85  AIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFR 144
           A+A++   +   +   +     SG   AI   +   + PG  IL+  P + ++       
Sbjct: 70  AVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQFTSPGDQILVQEPVYNMFYSVIEGN 129

Query: 145 HIEVRHFDLLPDKG-WEVDLDDIES-LADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202
              V   DL+ +   + V+  D+E  LA  +   +V  NP NP G  +S + ++++AE  
Sbjct: 130 GRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELC 189

Query: 203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLGWFVTT 260
            K + L+I+DE++G LV  D+   P           +++L S SK + +        +  
Sbjct: 190 AKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIP 249

Query: 261 DP 262
           +P
Sbjct: 250 NP 251

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3 Length = 390

 Score = 84.5 bits (210), Expect = 2e-18
 Identities = 43/212 (20%), Positives = 81/212 (38%), Gaps = 13/212 (6%)

Query: 59  EAVAEAL---LSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV 115
             + EAL   L     GY+          AIA + S      +    V         +  
Sbjct: 44  PCIIEALNQRLMHGVFGYSRWKNDEF-LAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSE 102

Query: 116 AMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG-WEVDLDDIES-LADQN 173
            +   S  G  +++  P +  +  +       V    L      W  D+  +E+ LA   
Sbjct: 103 LIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPE 162

Query: 174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233
              +++ +P NP G V++   L+ +A+   +    VI+DE++  +V+G++P +P     S
Sbjct: 163 CKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPW----S 218

Query: 234 TVP---ILTLGSLSKRWIVPGWRLGWFVTTDP 262
            V       L S SK + +P     + +  + 
Sbjct: 219 NVARGDWALLTSGSKSFNIPALTGAYGIIENS 250

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A* Length = 356

 Score = 83.8 bits (208), Expect = 3e-18
 Identities = 52/202 (25%), Positives = 79/202 (39%), Gaps = 31/202 (15%)

Query: 63  EALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR 122
             L  +  N Y P           A+Y        + P  V V+ G  + I++ +     
Sbjct: 45  FQLTQQTLNRY-PECQPKAVIENYAQY------AGVKPEQVLVSRGADEGIELLIRAFCE 97

Query: 123 PGA-NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII- 180
           PG   IL   P + +Y +SA    +E R    L +  W++DL  I    D   V +V + 
Sbjct: 98  PGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDN--WQLDLQGISDKLDG--VKVVYVC 153

Query: 181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT- 239
           +P NP G + + Q  + L E     K +V+ADE Y    F  +         S    L  
Sbjct: 154 SPNNPTGQLINPQDFRTLLELTRG-KAIVVADEAYIE--FCPQA--------SLAGWLAE 202

Query: 240 ------LGSLSKRWIVPGWRLG 255
                 L +LSK + + G R G
Sbjct: 203 YPHLAILRTLSKAFALAGLRCG 224

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A* Length = 399

 Score = 84.1 bits (209), Expect = 3e-18
 Identities = 33/182 (18%), Positives = 80/182 (43%), Gaps = 4/182 (2%)

Query: 85  AIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFR 144
            + +++     + +  + +  T+G   A+  A+   ++PG  +++  P +  + ++   +
Sbjct: 74  TVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQ 133

Query: 145 HIEVRHFDLLPDKG-WEVDLDDIES-LADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202
             ++   +LL   G + +D   +E    D+N  AL+  +P NP G V+    LQK+ +  
Sbjct: 134 ERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIV 193

Query: 203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLGWFVTT 260
            K   ++ +DE++  L+               +    +T  + SK + + G  +   +  
Sbjct: 194 LKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIK 253

Query: 261 DP 262
           +P
Sbjct: 254 NP 255

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} Length = 363

 Score = 83.8 bits (208), Expect = 3e-18
 Identities = 46/200 (23%), Positives = 81/200 (40%), Gaps = 13/200 (6%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA 116
                A +    +   Y       L R+ +A++      Y+L   ++  T+G  + I++ 
Sbjct: 50  VAAIQANSS--VETEIYPDGWASSL-RKEVADF------YQLEEEELIFTAGVDELIELL 100

Query: 117 MALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176
             +L     N ++  P F  Y  +A     EVR   LL D   E DL+ + +  D+ T  
Sbjct: 101 TRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQD--GEHDLEGMLNAIDEKTTI 158

Query: 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP 236
           + I NP NP GN      +Q   +       LV+ DE Y   V   +P     +  +   
Sbjct: 159 VWICNPNNPTGNYIELADIQAFLDRVPS-DVLVVLDEAYIEYV-TPQPEKHEKLVRTYKN 216

Query: 237 ILTLGSLSKRWIVPGWRLGW 256
           ++   + SK + +   R+G+
Sbjct: 217 LIITRTFSKIYGLASARVGY 236

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae} Length = 377

 Score = 83.3 bits (207), Expect = 5e-18
 Identities = 44/213 (20%), Positives = 93/213 (43%), Gaps = 20/213 (9%)

Query: 59  EAVAEAL---LSEKFNGYA-PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114
            AV +A+   +  +  GY    + L    +A AE+ +    Y+  P  +F      + + 
Sbjct: 39  PAVLQAITDAVQREAFGYQPDGSLL---SQATAEFYADRYGYQARPEWIFPIPDVVRGLY 95

Query: 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFD---LLPDKGWEVDLDDIESLAD 171
           +A+   +   + +++P P +P       F H+ +       +  D    ++L D+E    
Sbjct: 96  IAIDHFTPAQSKVIVPTPAYP------PFFHL-LSATQREGIFIDATGGINLHDVEKGFQ 148

Query: 172 QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF 231
               ++++ NP NP G V++ + L +L + A++    V+ DE++  LVF  +        
Sbjct: 149 AGARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQ-HTVAAGV 207

Query: 232 GSTVP--ILTLGSLSKRWIVPGWRLGWFVTTDP 262
             T     +T+ + SK W + G +    + ++P
Sbjct: 208 SDTAASVCITITAPSKAWNIAGLKCAQIIFSNP 240

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A* Length = 391

 Score = 82.2 bits (204), Expect = 1e-17
 Identities = 36/182 (19%), Positives = 78/182 (42%), Gaps = 5/182 (2%)

Query: 85  AIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFR 144
           +I  +L R   +K+    +  + G   AI + +  L++    I++  P +  +       
Sbjct: 75  SIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVKNN 134

Query: 145 HIEVRHFDLLPDKG--WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA 202
           + E+    L   +   + +D +DIE+      +  ++ NP NP G V++   L+KL +  
Sbjct: 135 NRELIISPLQKLENGNYIMDYEDIENKIKDVKL-FILCNPHNPVGRVWTKDELKKLGDIC 193

Query: 203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLGWFVTT 260
            K    +I+DE++  ++      +PM           +T  + +K + + G +  + V  
Sbjct: 194 LKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLP 253

Query: 261 DP 262
           D 
Sbjct: 254 DE 255

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei} Length = 337

 Score = 78.3 bits (194), Expect = 1e-16
 Identities = 41/201 (20%), Positives = 69/201 (34%), Gaps = 26/201 (12%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID-V 115
              A+A A    + N Y   A   +  R +AE+      +    +++ +  G  +  D +
Sbjct: 34  VQAAIAAAA--ARINRYPFDAEPRV-MRKLAEH------FSCPEDNLMLVRGIDECFDRI 84

Query: 116 AMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTV 175
           +           +   PGF  Y    A   +      L  D    +D +D+         
Sbjct: 85  SAEF---SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDD--LLLDPNDL--AQVSRDD 137

Query: 176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV 235
            +V+ NP NP G   S   L +L + A      ++ DE Y    +       +       
Sbjct: 138 CVVLANPSNPTGQALSAGELDQLRQRA----GKLLIDETYVD--YSSFRARGLAYGE--- 188

Query: 236 PILTLGSLSKRWIVPGWRLGW 256
             L   S SK + + G RLG 
Sbjct: 189 NELVFRSFSKSYGLAGLRLGA 209

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A* Length = 335

 Score = 76.8 bits (190), Expect = 5e-16
 Identities = 34/171 (19%), Positives = 61/171 (35%), Gaps = 21/171 (12%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA 116
             + V   L S+    Y  +    L    I  YL  D    L+ N+V V +G  + I   
Sbjct: 37  LVDEVFRRLNSDALRIYYDSPDEEL-IEKILSYLDTD---FLSKNNVSVGNGADEIIY-- 90

Query: 117 MALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176
             ++       +   P +  Y + A     +     L  D    +   ++          
Sbjct: 91  --VMMLMFDRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKD--LRIPEVNVG-----EGDV 141

Query: 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP 227
           + I NP NP G+V+  + ++++ +T       V  DE Y    F  + +V 
Sbjct: 142 VFIPNPNNPTGHVFEREEIERILKTG----AFVALDEAYYE--FHGESYVD 186

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp} Length = 365

 Score = 77.2 bits (191), Expect = 5e-16
 Identities = 36/203 (17%), Positives = 69/203 (33%), Gaps = 15/203 (7%)

Query: 57  ATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA 116
           A E + +     K + Y   + + L +  +A+       YK+   ++ + +G  Q I+ A
Sbjct: 48  AIECLRQNA--NKAHLYPDDSMIEL-KSTLAQK------YKVQNENIIIGAGSDQVIEFA 98

Query: 117 MALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA 176
           +          L     F +YE+ A     +      +       +   +          
Sbjct: 99  IHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHN--LDEFKKLYETHKDEIKL 156

Query: 177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGV--FGS 233
           + +  P NP G         +  +  N+   LV+ D  Y     F D             
Sbjct: 157 IFLCLPNNPLGECLDASEATEFIKGVNE-DCLVVIDAAYNEFASFKDSKKHLEPCELIKE 215

Query: 234 TVPILTLGSLSKRWIVPGWRLGW 256
              +L LG+ SK + + G R+G+
Sbjct: 216 FDNVLYLGTFSKLYGLGGLRIGY 238

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15} Length = 360

 Score = 75.3 bits (186), Expect = 2e-15
 Identities = 35/205 (17%), Positives = 72/205 (35%), Gaps = 24/205 (11%)

Query: 57  ATEAVAEAL--LSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID 114
             +A+ E L         Y   +   L R    E       Y   P+ + + +G  + ++
Sbjct: 44  VVKAILEELGPDGAALRIYPSASSQKL-REVAGEL------YGFDPSWIIMANGSDEVLN 96

Query: 115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT 174
             +   +  G  I    P +  Y   A  +   VR F L  D  + +             
Sbjct: 97  NLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTGD--FRIAGFPERYEGK--- 151

Query: 175 VALVII-NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS 233
             +  +  P  P G  +  +++ +LA    +   +++ DE Y    F +   + +     
Sbjct: 152 --VFFLTTPNAPLGPSFPLEYIDELAR---RCAGMLVLDETYAE--FAESNALEL--VRR 202

Query: 234 TVPILTLGSLSKRWIVPGWRLGWFV 258
              ++   +LSK + + G R+G  +
Sbjct: 203 HENVVVTRTLSKSYSLAGMRIGLAI 227

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A* Length = 374

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 15/133 (11%)

Query: 102 DVFVTSGCTQAIDVAMALLSRPGANILLPR-PGFPIYELSAAFRHIEVRHFDLLPDKGWE 160
                +  + AI   +  L        LP  PG P  E S   + +  ++F+        
Sbjct: 78  KCVGFNRTSSAILATILALKPKKVIHYLPELPGHPSIERSC--KIVNAKYFES------- 128

Query: 161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV- 219
             + +I +  D++T+ ++  +  +    V   ++ +K+  TA   + +V  D+  G  V 
Sbjct: 129 DKVGEILNKIDKDTLVIITGSTMDL--KVIELENFKKVINTAKNKEAIVFVDDASGARVR 186

Query: 220 --FGDKPFVPMGV 230
             F   P + +G 
Sbjct: 187 LLFNQPPALKLGA 199

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	343
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	100.0
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	100.0
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	100.0
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	100.0
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	100.0
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	100.0
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	100.0
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	100.0
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	100.0
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	100.0
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	100.0
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	100.0
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	100.0
3ele_A	398	Amino transferase; RER070207001803, structural gen	100.0
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	100.0
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	100.0
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	100.0
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	100.0
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	100.0
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	100.0
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	100.0
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	100.0
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	100.0
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	100.0
3nra_A	407	Aspartate aminotransferase; structural genomics, j	100.0
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	100.0
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	100.0
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	100.0
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	100.0
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	100.0
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	100.0
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	100.0
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	100.0
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	100.0
4h51_A	420	Aspartate aminotransferase; ssgcid, structural gen	100.0
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	100.0
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	100.0
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	100.0
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	100.0
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	100.0
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	100.0
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	100.0
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	100.0
3rq1_A	418	Aminotransferase class I and II; structural genomi	100.0
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	100.0
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	100.0
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	100.0
1vp4_A	425	Aminotransferase, putative; structural genomics, j	100.0
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	100.0
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	100.0
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	100.0
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	100.0
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	100.0
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	100.0
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	100.0
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	100.0
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	100.0
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	100.0
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	100.0
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	100.0
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	100.0
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	100.0
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	100.0
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	100.0
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	100.0
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	100.0
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	100.0
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	100.0
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	100.0
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	100.0
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	100.0
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	100.0
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	100.0
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	100.0
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	100.0
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	100.0
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	100.0
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	100.0
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	100.0
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	100.0
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	100.0
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	100.0
1t3i_A	420	Probable cysteine desulfurase; PLP-binding enzyme,	99.97
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	99.97
1e5e_A	404	MGL, methionine gamma-lyase; methionine biosynthes	99.97
1kmj_A	406	Selenocysteine lyase; persulfide perselenide NIFS	99.97
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	99.97
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	99.97
1elu_A	390	L-cysteine/L-cystine C-S lyase; FES cluster biosyn	99.97
2dr1_A	386	PH1308 protein, 386AA long hypothetical serine ami	99.96
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	99.96
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	99.96
1svv_A	359	Threonine aldolase; structural genomics, structura	99.96
1vjo_A	393	Alanine--glyoxylate aminotransferase; 17130350, AL	99.96
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	99.96
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	99.96
3lvm_A	423	Cysteine desulfurase; structural genomics, montrea	99.96
3kki_A	409	CAI-1 autoinducer synthase; quorum sensing, CQSA,	99.96
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	99.96
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	99.96
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	99.96
1b9h_A	388	AHBA synthase, protein (3-amino-5-hydroxybenzoic a	99.96
2po3_A	424	4-dehydrase; external aldimine, PLP, aminotransfer	99.96
3cai_A	406	Possible aminotransferase; RV3778C; 1.80A {Mycobac	99.96
1v72_A	356	Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2	99.96
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	99.96
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	99.96
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	99.95
1jg8_A	347	L-ALLO-threonine aldolase; glycine biosynthesis, p	99.95
4eb5_A	382	Probable cysteine desulfurase 2; scaffold, transfe	99.95
2huf_A	393	Alanine glyoxylate aminotransferase; alpha and bet	99.95
2z9v_A	392	Aspartate aminotransferase; pyridoxamine, pyruvate	99.95
4adb_A	406	Succinylornithine transaminase; transferase, PLP e	99.95
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	99.95
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	99.95
1iug_A	352	Putative aspartate aminotransferase; wild type, py	99.95
2oga_A	399	Transaminase; PLP-dependent enzyme, desosamine, de	99.95
4hvk_A	382	Probable cysteine desulfurase 2; transferase and I	99.95
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	99.95
3zrp_A	384	Serine-pyruvate aminotransferase (AGXT); HET: PLP;	99.95
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	99.95
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.95
3vax_A	400	Putative uncharacterized protein DNDA; desulfurase	99.95
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	99.95
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	99.95
2yrr_A	353	Aminotransferase, class V; structural genomics, NP	99.95
2ch1_A	396	3-hydroxykynurenine transaminase; PLP-enzyme, kynu	99.95
3a9z_A	432	Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph	99.94
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	99.94
3lws_A	357	Aromatic amino acid beta-eliminating lyase/threoni	99.94
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	99.94
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	99.94
3pj0_A	359	LMO0305 protein; structural genomics, joint center	99.94
3nnk_A	411	Ureidoglycine-glyoxylate aminotransferase; PLP-dep	99.94
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	99.94
2c81_A	418	Glutamine-2-deoxy-scyllo-inosose aminotransferase;	99.94
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	99.94
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	99.94
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	99.94
3isl_A	416	Purine catabolism protein PUCG; pyridoxalphosphate	99.94
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.94
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	99.94
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.94
2bkw_A	385	Alanine-glyoxylate aminotransferase 1; analine-gly	99.93
1mdo_A	393	ARNB aminotransferase; type 1 aminotransferase fol	99.93
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	99.93
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	99.93
3kgw_A	393	Alanine-glyoxylate aminotransferase; AAH25799.1, p	99.93
3uwc_A	374	Nucleotide-sugar aminotransferase; lipopolysacchar	99.93
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.93
3ffr_A	362	Phosphoserine aminotransferase SERC; structural ge	99.93
3f0h_A	376	Aminotransferase; RER070207000802, structural geno	99.93
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	99.93
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	99.93
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	99.93
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	99.93
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	99.93
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	99.93
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	99.93
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	99.93
3cog_A	403	Cystathionine gamma-lyase; CTH, PLP, propargylglyc	99.93
3dr4_A	391	Putative perosamine synthetase; deoxysugar, pyrido	99.93
1z7d_A	433	Ornithine aminotransferase; structural genomics co	99.93
3nyt_A	367	Aminotransferase WBPE; PLP binding, nucleotide-sug	99.93
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	99.93
2fnu_A	375	Aminotransferase; protein-product complex, structu	99.93
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.93
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	99.92
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	99.92
1cs1_A	386	CGS, protein (cystathionine gamma-synthase); lyase	99.92
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	99.92
1qz9_A	416	Kynureninase; kynurenine, tryptophan, PLP, vitamin	99.92
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	99.92
1o69_A	394	Aminotransferase; structural genomics, unknown fun	99.92
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	99.92
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.92
2oqx_A	467	Tryptophanase; lyase, pyridoxal phosphate, tryptop	99.92
3jzl_A	409	Putative cystathionine beta-lyase involved in ALU	99.92
2epj_A	434	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.92
3frk_A	373	QDTB; aminotransferase, sugar-modification, natura	99.92
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	99.92
1n8p_A	393	Cystathionine gamma-lyase; three open alpha/beta s	99.92
3tfu_A	457	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.92
3i16_A	427	Aluminum resistance protein; YP_878183.1, carbon-s	99.92
3hvy_A	427	Cystathionine beta-lyase family protein, YNBB B.S	99.92
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	99.91
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	99.91
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	99.91
1pff_A	331	Methionine gamma-lyase; homocysteine; 2.50A {Trich	99.91
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	99.91
2c0r_A	362	PSAT, phosphoserine aminotransferase; pyridoxal-5'	99.91
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	99.91
4e77_A	429	Glutamate-1-semialdehyde 2,1-aminomutase; structur	99.91
3hmu_A	472	Aminotransferase, class III; structural genomics,	99.91
3nmy_A	400	Xometc, cystathionine gamma-lyase-like protein; Cy	99.91
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	99.91
1wyu_B	474	Glycine dehydrogenase subunit 2 (P-protein); alpha	99.91
3e9k_A	465	Kynureninase; kynurenine-L-hydrolase, kynurenine h	99.9
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	99.9
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	99.9
3ju7_A	377	Putative PLP-dependent aminotransferase; NP_978343	99.9
3ht4_A	431	Aluminum resistance protein; lyase, putative cysta	99.9
3vp6_A	511	Glutamate decarboxylase 1; catalytic loop SWAP, ly	99.9
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	99.9
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	99.9
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	99.89
3bb8_A	437	CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat	99.89
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	99.89
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	99.88
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	99.88
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	99.88
2fyf_A	398	PSAT, phosphoserine aminotransferase; PLP-dependen	99.88
3b8x_A	390	WBDK, pyridoxamine 5-phosphate-dependent dehydrase	99.87
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	99.86
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.86
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	99.85
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	99.85
2yky_A	465	Beta-transaminase; transferase; HET: PLP SFE; 1.69	99.76
2x3l_A	446	ORN/Lys/Arg decarboxylase family protein; lyase; H	99.85
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	99.83
1c4k_A	730	Protein (ornithine decarboxylase); lyase; HET: PLP	99.81
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	99.81
3ke3_A	379	Putative serine-pyruvate aminotransferase; structu	99.8
2vyc_A	755	Biodegradative arginine decarboxylase; pyridoxal p	99.8
3n75_A	715	LDC, lysine decarboxylase, inducible; pyridoxal-5'	99.77
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	99.77
3e77_A	377	Phosphoserine aminotransferase; SERC, PLP, structu	99.59
3m5u_A	361	Phosphoserine aminotransferase; alpha-beta half sa	99.56
3qm2_A	386	Phosphoserine aminotransferase; structural genomic	99.53
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.51
4ao9_A	454	Beta-phenylalanine aminotransferase; HET: PLP; 1.5	99.51
3bc8_A	450	O-phosphoseryl-tRNA(SEC) selenium transferase; dis	99.49
3ou5_A	490	Serine hydroxymethyltransferase, mitochondrial; st	99.42
4atq_A	456	4-aminobutyrate transaminase; transferase; HET: PL	99.42
4e3q_A	473	Pyruvate transaminase; aminotransferase, transfera	99.41
4a0g_A	831	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.29
3gh5_A	525	HEX1, beta-hexosaminidase; beta-N-acetylhexosamini	84.79
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	84.42

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*

Probab=100.00  E-value=4e-47  Score=350.08  Aligned_cols=321  Identities=24%  Similarity=0.360  Sum_probs=273.7

Q ss_pred             Cc-ccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCC
Q 019298            1 ME-ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGL   79 (343)
Q Consensus         1 ~~-~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~   79 (343)
                      |+ +|++....+++  ++..+.....+...   .+.+.|+|+.|+|+    +++++.+.+++.+.+... ...|++..|.
T Consensus         1 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~   70 (385)
T 1b5p_A            1 MRGLSRRVQAMKPS--ATVAVNAKALELRR---QGVDLVALTAGEPD----FDTPEHVKEAARRALAQG-KTKYAPPAGI   70 (385)
T ss_dssp             CCCCCHHHHHCCCC--HHHHHHHHHHHHHH---TTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCC
T ss_pred             CchhhhHHhhcCcc--hHHHHHHHHHHHHh---cCCCEEEecCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCC
Confidence            44 78888888888  67777666554432   25678999999964    566789999998887654 3579888899


Q ss_pred             HHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC
Q 019298           80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW  159 (343)
Q Consensus        80 ~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  159 (343)
                      +++|+++++++.+.+|..+++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.+++++++++
T Consensus        71 ~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~  150 (385)
T 1b5p_A           71 PELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGF  150 (385)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTT
T ss_pred             HHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCC
Confidence            99999999999988888889999999999999999999999999999999999999999999999999999998765678


Q ss_pred             CCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEE
Q 019298          160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT  239 (343)
Q Consensus       160 ~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~  239 (343)
                      .+|+++++++++++++++++++||||||.+++.+++++|+++|++||+++|+||+|+.+.+++ ...++..+.. +++++
T Consensus       151 ~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~-~~~i~  228 (385)
T 1b5p_A          151 VPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG-EHFSPGRVAP-EHTLT  228 (385)
T ss_dssp             CCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-CCCCGGGTCT-TTEEE
T ss_pred             CCCHHHHHHhcCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCCHHHcCC-CCEEE
Confidence            899999999998888999999999999999999999999999999999999999999998876 4445555554 78999


Q ss_pred             EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchh---hHHHHH-HHHHHHHH
Q 019298          240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLST---IMQIMI-HGNFLENF  314 (343)
Q Consensus       240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~---~~~~l~-~~~~~~~~  314 (343)
                      ++||||.|+++|+|+||++++        ++++++++.... ...+++.+.|.++ ..+|+.   ..++++ .+++++++
T Consensus       229 ~~s~SK~~~~~G~RiG~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~  299 (385)
T 1b5p_A          229 VNGAAKAFAMTGWRIGYACGP--------KEVIKAMASVSRQSTTSPDTIAQWAT-LEALTNQEASRAFVEMAREAYRRR  299 (385)
T ss_dssp             EEESTTTTTCGGGCCEEEECC--------HHHHHHHHHHHHTTTCSCCHHHHHHH-HHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred             EEechhhcCCcccceEEEEeC--------HHHHHHHHHHHhhccCCCCHHHHHHH-HHHHhCCCcchHHHHHHHHHHHHH
Confidence            999999999999999999985        368888877654 2457788888887 667754   345555 88999999


Q ss_pred             HHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          315 AGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       315 ~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++.+.+.|+++ |+.+..|++|+|+|+++
T Consensus       300 ~~~l~~~L~~~-g~~~~~~~~~~~~~~~~  327 (385)
T 1b5p_A          300 RDLLLEGLTAL-GLKAVRPSGAFYVLMDT  327 (385)
T ss_dssp             HHHHHHHHHHH-TCCBCCCSBTTEEEEEC
T ss_pred             HHHHHHHHHHC-CCeecCCCeeEEEEEec
Confidence            99999999988 88887899999999764

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0

Probab=100.00  E-value=1.5e-46  Score=347.07  Aligned_cols=326  Identities=12%  Similarity=0.075  Sum_probs=257.4

Q ss_pred             ccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCC-CCCCCCCCcHHHHHHHHHHH-hcCCCCCCCCCCCCH
Q 019298            3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEAL-LSEKFNGYAPTAGLP   80 (343)
Q Consensus         3 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~~~g~~   80 (343)
                      ++.+....+++  +++.+...+.++.     ..++|||++|.+ +..+.+.+++.++++++ .. ......+|++..|.+
T Consensus         4 ~~~~~~~~~~~--~i~~~~~~~~~~~-----~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~   75 (405)
T 3k7y_A            4 LLSSLENIEVD--NILKTAREFKEDT-----CEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTE   75 (405)
T ss_dssp             GGGGCCCCCCC--HHHHHHHHHTTSS-----CSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCH
T ss_pred             hhhcCCCCCCC--hHHHHHHHHhcCC-----CcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcH
Confidence            45677788887  7899988777765     568899999984 32233567888998877 54 344567899999999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCc--EEEecChHHHHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhcCceeEEeecCCC
Q 019298           81 LTRRAIAEYLSRDLPYKLTPND--VFVTSGCTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD  156 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~--i~~~~g~~~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~  156 (343)
                      +||+++++|+.++.+..+++++  +++|+|+++++..++.++..  + |+|++++|+|..|...++..|.+++.+++..+
T Consensus        76 ~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~  154 (405)
T 3k7y_A           76 DFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDY  154 (405)
T ss_dssp             HHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEET
T ss_pred             HHHHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEecccc
Confidence            9999999999776665667775  59999999999999999987  8 99999999999999999999999999998555


Q ss_pred             CCCCCCHHHHHhhhcC--CceEEEEeCC-CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC--CCCccccc
Q 019298          157 KGWEVDLDDIESLADQ--NTVALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK--PFVPMGVF  231 (343)
Q Consensus       157 ~~~~~d~~~l~~~~~~--~~~~i~~~~p-~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~--~~~~~~~~  231 (343)
                      +++++|++.+++.+++  .+++++++.| |||||.+++.+++++|+++|++|++++|+||+|.++.+++.  ...++..+
T Consensus       155 ~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~  234 (405)
T 3k7y_A          155 NLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKF  234 (405)
T ss_dssp             TTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHH
T ss_pred             ccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHH
Confidence            5789999999998864  4567777665 89999999999999999999999999999999999988642  12222222


Q ss_pred             -CCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHh----hhh-ccccCcchHHHHHHHhccchhh---H
Q 019298          232 -GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK----KYF-DILGDPATFIQVCIMYGCLSTI---M  302 (343)
Q Consensus       232 -~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~----~~~-~~~~~~~~~~~~a~~~~~l~~~---~  302 (343)
                       ...+++|+++||||+|+++|+|+||+++...     ++++++++.    ... ....+++.++|.++ ..+|.+.   .
T Consensus       235 ~~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~-~~~l~~~~l~~  308 (405)
T 3k7y_A          235 EEKNIAFSVCQSFSKNMSLYGERAGALHIVCK-----NQEEKKIVFNNLCFIVRKFYSSPVIHTNRIL-CQLLNNQNLKL  308 (405)
T ss_dssp             HTTTCCEEEEEECTTTSCCTTTTEEEEEEECS-----SHHHHHHHHHHHHHHHHTTTSSCCHHHHHHH-HHHHHCHHHHH
T ss_pred             HhcCCcEEEEeeCCccCCCccccceEEEEEeC-----CHHHHHHHHHHHHHHHhcccCCCcHHHHHHH-HHHhCCHHHHH
Confidence             2346899999999999999999999875321     245555443    332 23446677888877 6666653   2


Q ss_pred             HHHH----HHHHHHHHHHHHHHhhc----CCC---CceeeCCCCceEeeecC
Q 019298          303 QIMI----HGNFLENFAGSCVPSYK----LIP---ELINFKSTGSSLKYLDL  343 (343)
Q Consensus       303 ~~l~----~~~~~~~~~~~~~~~L~----~~~---g~~~~~~~~g~~~~~~l  343 (343)
                      +|.+    .+++++++|+.+.+.|+    +++   +|.+..|+||+|+|+++
T Consensus       309 ~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l  360 (405)
T 3k7y_A          309 NWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPL  360 (405)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEECGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEEEecCC
Confidence            3443    67889999999999999    762   26777999999999864

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*

Probab=100.00  E-value=2.6e-46  Score=349.25  Aligned_cols=321  Identities=38%  Similarity=0.697  Sum_probs=269.2

Q ss_pred             cHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCC
Q 019298           16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLP   95 (343)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~   95 (343)
                      +++.++..+..+..   .++++|+|+.|.|+..+.+++++.+++++.+++......+|++..|.+++|+++++++.+. +
T Consensus        38 ~i~~~~~~~~~~~~---~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-~  113 (427)
T 3dyd_A           38 PIRAIVDNMKVKPN---PNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCP-E  113 (427)
T ss_dssp             ---------CCCCC---TTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBT-T
T ss_pred             hHHHHHHHHhhccc---CCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhc-C
Confidence            57888776665442   3567899999998765568899999999999988766678998899999999999999764 6


Q ss_pred             CCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCce
Q 019298           96 YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTV  175 (343)
Q Consensus        96 ~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~  175 (343)
                      ..+++++|++|+|+++++..+++.+.++||+|+++.|+|..+...++..|.+++.+++.+++++.+|++++++.++++++
T Consensus       114 ~~~~~~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~  193 (427)
T 3dyd_A          114 APLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTA  193 (427)
T ss_dssp             BCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCTTEE
T ss_pred             CCCChHHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCC
Confidence            66889999999999999999999999999999999999999999999999999999987777888999999999988899


Q ss_pred             EEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEE
Q 019298          176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG  255 (343)
Q Consensus       176 ~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G  255 (343)
                      ++++++|+||||.+++.+++++|+++|+++|+++|+||+|+++.+++....++..+....++++++|+||.|+++|+|+|
T Consensus       194 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG  273 (427)
T 3dyd_A          194 CLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLG  273 (427)
T ss_dssp             EEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCE
T ss_pred             EEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceE
Confidence            99999999999999999999999999999999999999999999887766666666666789999999999999999999


Q ss_pred             EEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298          256 WFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSCVPSYKLIPELINFKS  333 (343)
Q Consensus       256 ~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~  333 (343)
                      |++++++.... .+++++.++......++++++.|.++ .++|.+ ..++++ .+++++++++.+.+.|+++||+.+..|
T Consensus       274 ~~~~~~~~~~~-~~~i~~~l~~~~~~~~~~~~~~~~a~-~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~p  351 (427)
T 3dyd_A          274 WILIHDRRDIF-GNEIRDGLVKLSQRILGPCTIVQGAL-KSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRP  351 (427)
T ss_dssp             EEEEECSTTSS-HHHHHHHHHHHHHHHCCSCHHHHHHH-HHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECC
T ss_pred             EEEecCcchhh-HHHHHHHHHHHHhccCCCCHHHHHHH-HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC
Confidence            99997643221 13577777766543567888999888 666663 244444 888999999999999999999998799


Q ss_pred             CCceEeeec
Q 019298          334 TGSSLKYLD  342 (343)
Q Consensus       334 ~~g~~~~~~  342 (343)
                      ++|+|+|++
T Consensus       352 ~~g~~~~~~  360 (427)
T 3dyd_A          352 SGAMYLMVG  360 (427)
T ss_dssp             SBTTEEEEE
T ss_pred             CeeEEEEEe
Confidence            999999975

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1

Probab=100.00  E-value=1.7e-44  Score=332.67  Aligned_cols=324  Identities=21%  Similarity=0.294  Sum_probs=271.7

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~   80 (343)
                      |++|+|..+.+++  ++..+.....+..   ..++++++|+.|.++    ++.++.+.+++.+++... ...|++..|..
T Consensus         1 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~   70 (388)
T 1j32_A            1 MKLAARVESVSPS--MTLIIDAKAKAMK---AEGIDVCSFSAGEPD----FNTPKHIVEAAKAALEQG-KTRYGPAAGEP   70 (388)
T ss_dssp             CCCCHHHHTSCCC--SSTTTHHHHHHHH---TTTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCH
T ss_pred             CchhhHhHhCCcc--HHHHHHHHHHHHH---hcCCCEEECCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCH
Confidence            6788888888877  4555555444432   126788999999953    567899999999988654 35799888999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (343)
                      ++|+++++++.+.+|..+++++|++|+|+++++..++++++++||+|++++|+|..+...++..|.+++.++.++++++.
T Consensus        71 ~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~  150 (388)
T 1j32_A           71 RLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFK  150 (388)
T ss_dssp             HHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTC
T ss_pred             HHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCC
Confidence            99999999999888887889999999999999999999999999999999999999999999999999999887655678


Q ss_pred             CCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC--CCCEE
Q 019298          161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPIL  238 (343)
Q Consensus       161 ~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~--~~~~i  238 (343)
                      +|+++|++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|+.+.+++....++..+..  .++++
T Consensus       151 ~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (388)
T 1j32_A          151 VSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSV  230 (388)
T ss_dssp             CCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEE
T ss_pred             CCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEE
Confidence            9999999999888899999999999999999999999999999999999999999999887655445544442  45789


Q ss_pred             EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHH
Q 019298          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAG  316 (343)
Q Consensus       239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~  316 (343)
                      +++|+||.|+++|+|+||++++        ++++++++.... ...+++++.+.++ ..+|....++++ .+++++++++
T Consensus       231 ~~~s~sK~~~~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~  301 (388)
T 1j32_A          231 VCSGFAKTYAMTGWRVGFLAGP--------VPLVKAATKIQGHSTSNVCTFAQYGA-IAAYENSQDCVQEMLAAFAERRR  301 (388)
T ss_dssp             EEEESTTTTTCTTTCCEEEECC--------HHHHHHHHHHHHTTTCSCCHHHHHHH-HHHHHSCSHHHHHHHHHHHHHHH
T ss_pred             EEeechhccCCcccceEEEEeC--------HHHHHHHHHHHhhcccCCCHHHHHHH-HHHHhCCcHHHHHHHHHHHHHHH
Confidence            9999999999999999999985        368888876643 3457788888777 556654345555 8889999999


Q ss_pred             HHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          317 SCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       317 ~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      .+.+.|+++||+.+..+++|+|+|+++
T Consensus       302 ~l~~~L~~~~g~~~~~~~~~~~~~~~~  328 (388)
T 1j32_A          302 YMLDALNAMPGLECPKPDGAFYMFPSI  328 (388)
T ss_dssp             HHHHHHHTCTTCBCCCCCBTTEECCBC
T ss_pred             HHHHHHhhCCCCcccCCCeeEEEEEec
Confidence            999999998899987889999999864

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*

Probab=100.00  E-value=1.4e-44  Score=336.88  Aligned_cols=328  Identities=14%  Similarity=0.169  Sum_probs=264.9

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccC---CCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMG---DPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTA   77 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~   77 (343)
                      |++++|....+++  +++.+...+.++.     .+++|||+.|   +|+  ...++++.+++++.+++......+|++..
T Consensus        22 ~~~~~~~~~~~~~--~i~~~~~~~~~~~-----~~~~i~l~~G~y~d~~--~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~   92 (420)
T 4f4e_A           22 MSLFSAVELAPRD--PILGLNEAFNADT-----RPTKVNLGVGVYTNED--GKIPLLRAVRDAEKARVEAGLPRGYLPID   92 (420)
T ss_dssp             CCTTTTCCCCCCC--HHHHHHHHHHHCC-----CSSCEECCCCSCCCTT--SCCCCCHHHHHHHHHHHHTCCCCCCCCTT
T ss_pred             cCHhhcCCcCCCC--hHHHHHHHHHhcC-----CCCcEEeeeeeeECCC--CCccCcHHHHHHHHHHhccCCCCCCCCCC
Confidence            6789999999988  8999988887765     5688999999   444  33456699999999998875567899999


Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCC--cEEEecChHHHHHHHHH--HhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeec
Q 019298           78 GLPLTRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMA--LLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL  153 (343)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~--~i~~~~g~~~al~~~~~--~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~  153 (343)
                      |.+++|+++++++.+..+..++++  +|++|+|+++++..+++  .++++||+|++++|+|.++...++..|.+++.+++
T Consensus        93 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~  172 (420)
T 4f4e_A           93 GIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPY  172 (420)
T ss_dssp             CCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEEC
T ss_pred             CcHHHHHHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeee
Confidence            999999999999976444344678  89999999999999954  55789999999999999999999999999999998


Q ss_pred             CCCCCCCCCHHHHHhhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC-CCCccc
Q 019298          154 LPDKGWEVDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVPMG  229 (343)
Q Consensus       154 ~~~~~~~~d~~~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~-~~~~~~  229 (343)
                      ..++++.+|++.+++.++   ++++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. ...++.
T Consensus       173 ~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~  252 (420)
T 4f4e_A          173 YDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVR  252 (420)
T ss_dssp             EETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHH
T ss_pred             eccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHH
Confidence            544678899999999987   5678889999999999999999999999999999999999999999998752 223333


Q ss_pred             cc-CCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH----Hhhhh-ccccCcchHHHHHHHhccchhh--
Q 019298          230 VF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER----MKKYF-DILGDPATFIQVCIMYGCLSTI--  301 (343)
Q Consensus       230 ~~-~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~----l~~~~-~~~~~~~~~~~~a~~~~~l~~~--  301 (343)
                      .+ ...+++++++||||+|+++|+|+||+++..+     +++++++    ++... ..+.+++.+.|.++ ..+|.+.  
T Consensus       253 ~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~l  326 (420)
T 4f4e_A          253 LFAAANLNVFVSSSFSKSFSLYGERVGALSIITD-----SKDEAARVLSQLKRVIRTNYSNPPTHGGAIV-AAVLASPEL  326 (420)
T ss_dssp             HHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECS-----SHHHHHHHHHHHHHHHHTTTSSCCSHHHHHH-HHHHHCHHH
T ss_pred             HHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcC-----CHHHHHHHHHHHHHHHhcccCCCCHHHHHHH-HHHhcCHHH
Confidence            33 2456899999999999999999999875321     2344443    33322 23456677888777 5555542  


Q ss_pred             ----HHHHH-HHHHHHHHHHHHHHhhcCC---CCceeeCCCCceEeeecC
Q 019298          302 ----MQIMI-HGNFLENFAGSCVPSYKLI---PELINFKSTGSSLKYLDL  343 (343)
Q Consensus       302 ----~~~l~-~~~~~~~~~~~~~~~L~~~---~g~~~~~~~~g~~~~~~l  343 (343)
                          .++++ .+++++++++.+.+.|+++   +|+.+..|++|+|+|+++
T Consensus       327 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~  376 (420)
T 4f4e_A          327 RASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGL  376 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHSCSSEEECCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCCccEEEEeCC
Confidence                23333 8899999999999999886   478877899999999874

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*

Probab=100.00  E-value=1.2e-43  Score=327.20  Aligned_cols=319  Identities=25%  Similarity=0.391  Sum_probs=269.4

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~   80 (343)
                      |++|+|....+++  .+..+.....+.       +++|+|+.|.++    +++++.+.+++.+++... ...|++..|..
T Consensus         1 ~~~~~~~~~~~~~--~~~~~~~~~~~~-------~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~   66 (389)
T 1gd9_A            1 MALSDRLELVSAS--EIRKLFDIAAGM-------KDVISLGIGEPD----FDTPQHIKEYAKEALDKG-LTHYGPNIGLL   66 (389)
T ss_dssp             -CHHHHHHHSCCC--HHHHHHHHHHTC-------SSCEECCCCSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCH
T ss_pred             CchhhHhHhCChh--HHHHHHHHHhhh-------cCeEecCCCCCC----CCCCHHHHHHHHHHHhCC-CCCCCCCCCcH
Confidence            6788899888887  677776654432       468999999954    567899999999988764 35798888999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCc-EEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC
Q 019298           81 LTRRAIAEYLSRDLPYKLTPND-VFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW  159 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~-i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  159 (343)
                      ++|+++++++.+.+|..+++++ |++|+|+++++..++++++++||+|++++|+|+++...++..|.+++.+++++++++
T Consensus        67 ~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~  146 (389)
T 1gd9_A           67 ELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEF  146 (389)
T ss_dssp             HHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTT
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCC
Confidence            9999999999887787788899 999999999999999999999999999999999999999999999999998755567


Q ss_pred             CCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEE
Q 019298          160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPIL  238 (343)
Q Consensus       160 ~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i  238 (343)
                      .+|+++|+++++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++....++..+.. .++++
T Consensus       147 ~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i  226 (389)
T 1gd9_A          147 RLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTI  226 (389)
T ss_dssp             CCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEE
T ss_pred             CCCHHHHHHhcCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEE
Confidence            89999999999888899999999999999999999999999999999999999999999887653444444432 45789


Q ss_pred             EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHH--HHH-HHHHHHHH
Q 019298          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQ--IMI-HGNFLENF  314 (343)
Q Consensus       239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~--~l~-~~~~~~~~  314 (343)
                      +++|+||.|+++|+|+||++++        ++++++++.... ..++++++.|.++ ..+|.....  +++ .+++++++
T Consensus       227 ~~~s~sK~~~~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~  297 (389)
T 1gd9_A          227 TVNGFSKTFAMTGWRLGFVAAP--------SWIIERMVKFQMYNATCPVTFIQYAA-AKALKDERSWKAVEEMRKEYDRR  297 (389)
T ss_dssp             EEEESTTTTTCGGGCCEEEECC--------HHHHHHHHHHHTTTTCSCCHHHHHHH-HHHHTCHHHHHHHHHHHHHHHHH
T ss_pred             EEecChhhcCCcccceEEEEEC--------HHHHHHHHHHHhhhccCCCHHHHHHH-HHHHhCCCcchHHHHHHHHHHHH
Confidence            9999999999999999999985        368888877654 3457788888887 667765444  555 88889999


Q ss_pred             HHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          315 AGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       315 ~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++.+.+.|+++ |+.+..+++|+|+|+++
T Consensus       298 ~~~l~~~L~~~-g~~~~~~~~~~~~~~~~  325 (389)
T 1gd9_A          298 RKLVWKRLNEM-GLPTVKPKGAFYIFPRI  325 (389)
T ss_dssp             HHHHHHHHHHT-TCCCCCCCBTTEECCBC
T ss_pred             HHHHHHHHHHc-CCeecCCCeeeEEEEec
Confidence            99999999988 88877889999999864

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}

Probab=100.00  E-value=7.1e-44  Score=331.28  Aligned_cols=324  Identities=19%  Similarity=0.267  Sum_probs=252.8

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~   80 (343)
                      |.+|++..+.+++  .+..+.....+..   .++.++|||+.|.++    +++++.+.+++.+++.....+.|++..|..
T Consensus         8 ~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~g~~~idl~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~   78 (412)
T 2x5d_A            8 ARRFARIDRLPPY--VFNITAELKMAAR---RRGEDIIDLSMGNPD----GPTPPHIVEKLCTVAQREDTHGYSTSRGIP   78 (412)
T ss_dssp             ---------------CHHHHHHHHHHHH---HTTCCCEECSSCCCC----SCCCHHHHHHHHHTC---------CTTCCH
T ss_pred             cchhHHHhhcCch--HHHHHHHHHHHHh---hcCCCEEecCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcH
Confidence            4577787777766  5555544433221   236789999999953    567899999999887654456798878999


Q ss_pred             HHHHHHHHHHhhhCCCCCCC-CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC
Q 019298           81 LTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW  159 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  159 (343)
                      ++|+++++++.+.+|..+++ ++|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.+++++++++
T Consensus        79 ~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  158 (412)
T 2x5d_A           79 RLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDF  158 (412)
T ss_dssp             HHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCC
Confidence            99999999998877877788 79999999999999999999999999999999999999999999999999988765466


Q ss_pred             CCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEE
Q 019298          160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPIL  238 (343)
Q Consensus       160 ~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i  238 (343)
                      .+|+++++++++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++....++..+.. .++++
T Consensus       159 ~~d~~~l~~~i~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i  238 (412)
T 2x5d_A          159 FNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAV  238 (412)
T ss_dssp             HHHHHHHHHTEESCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEE
T ss_pred             CCCHHHHHHhcccCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEE
Confidence            68899999999888899999999999999999999999999999999999999999999886654444444433 46889


Q ss_pred             EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHH
Q 019298          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAG  316 (343)
Q Consensus       239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~  316 (343)
                      +++|+||.|+++|+|+||++++        +++++.++.... ..++++++.|.++ ..+|....++++ .+++++++++
T Consensus       239 ~~~s~sK~~~~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~  309 (412)
T 2x5d_A          239 EFFTLSKSYNMAGWRIGFMVGN--------PELVSALARIKSYHDYGTFTPLQVAA-IAALEGDQQCVRDIARQYQQRRD  309 (412)
T ss_dssp             EEEECC-CCSCTTSCCEEEEEC--------HHHHHHHHHHHHHHCCCCCHHHHHHH-HHHHHSCSHHHHHHHHHHHHHHH
T ss_pred             EEecCccccCCcccceEEEEcC--------HHHHHHHHHHHhhhccCCCHHHHHHH-HHHHhCCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999984        468888876643 2467788888888 666765445555 8889999999


Q ss_pred             HHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          317 SCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       317 ~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      .+.+.|+++ |+.+..+++|+|+|+++
T Consensus       310 ~l~~~L~~~-g~~~~~~~~g~~~~~~~  335 (412)
T 2x5d_A          310 VLVKGLREA-GWMVENPKASMYVWAKI  335 (412)
T ss_dssp             HHHHHHHHH-TCCCCCCSBSSEEEEEC
T ss_pred             HHHHHHHHC-CCEecCCCeeeEEEEEc
Confidence            999999988 78877888999999864

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*

Probab=100.00  E-value=8.3e-44  Score=331.65  Aligned_cols=319  Identities=22%  Similarity=0.343  Sum_probs=272.1

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCC
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-FNGYAPTAGL   79 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~   79 (343)
                      +.+|+|....+++  .++.+.....        +.++|+|+.|.|+    +++++.+.+++.+++.... ..+|++..|.
T Consensus         4 ~~~~~~~~~~~~~--~~~~~~~~~~--------~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~   69 (422)
T 3fvs_A            4 QLQARRLDGIDYN--PWVEFVKLAS--------EHDVVNLGQGFPD----FPPPDFAVEAFQHAVSGDFMLNQYTKTFGY   69 (422)
T ss_dssp             CCSCGGGTTCCCC--HHHHHHHHHH--------TSCCEECCCSSCS----SCCCHHHHHHHHHHHHSCGGGGSCCCTTCC
T ss_pred             hhHHHHhhccCcc--HHHHHHHHhh--------cCCceEeCCCCCC----CCCCHHHHHHHHHHHhCCCccCCCCCCCCC
Confidence            3578888888877  6666654321        4578999999954    6789999999999987643 4689988899


Q ss_pred             HHHHHHHHHHHhhhCCCCCCC-CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCC---
Q 019298           80 PLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP---  155 (343)
Q Consensus        80 ~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~---  155 (343)
                      +++|+++++++++.+|..+++ ++|++|+|+++++..+++.++++||+|+++.|+|..+...++..|.+++.+++++   
T Consensus        70 ~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  149 (422)
T 3fvs_A           70 PPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPI  149 (422)
T ss_dssp             HHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCC
T ss_pred             HHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEecccccc
Confidence            999999999999888888888 7999999999999999999999999999999999999999999999999998875   


Q ss_pred             -------CCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcc
Q 019298          156 -------DKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM  228 (343)
Q Consensus       156 -------~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~  228 (343)
                             ++++.+|+++++++++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++....++
T Consensus       150 ~~G~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~  229 (422)
T 3fvs_A          150 QNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISI  229 (422)
T ss_dssp             CSSSCCBGGGSBCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCG
T ss_pred             cccccccccCCCCCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCCh
Confidence                   2356799999999998889999999999999999999999999999999999999999999999887665565


Q ss_pred             cccCC-CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchh------
Q 019298          229 GVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLST------  300 (343)
Q Consensus       229 ~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~------  300 (343)
                      ..+.. .+++++++|+||.|+++|+|+||++++        +++++.+..... ..++++++.+.++ ..+|.+      
T Consensus       230 ~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~  300 (422)
T 3fvs_A          230 ASLPGMWERTLTIGSAGKTFSATGWKVGWVLGP--------DHIMKHLRTVHQNSVFHCPTQSQAAV-AESFEREQLLFR  300 (422)
T ss_dssp             GGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECC--------HHHHHHHHHHHHTTTCCCCHHHHHHH-HHHHHHHHHTTT
T ss_pred             hhcccccCcEEEEecchhccCCccceEEEEEeC--------HHHHHHHHHHHhhccCCCCcHHHHHH-HHHHhhcccccc
Confidence            55543 468999999999999999999999985        368888876643 3567788888888 555543      


Q ss_pred             -hHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          301 -IMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       301 -~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                       ...+++ .+++++++++.+.+.|+++ |+.+..|++|+|+|+++
T Consensus       301 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~  344 (422)
T 3fvs_A          301 QPSSYFVQFPQAMQRCRDHMIRSLQSV-GLKPIIPQGSYFLITDI  344 (422)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEBCSBSSEEEEEC
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHc-CCeecCCCeeeEEEEec
Confidence             234444 8899999999999999998 89877999999999864

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1

Probab=100.00  E-value=1.5e-43  Score=329.40  Aligned_cols=305  Identities=30%  Similarity=0.537  Sum_probs=254.6

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhh------hCCCCCCCCcEEEec
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSR------DLPYKLTPNDVFVTS  107 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~------~~~~~~~~~~i~~~~  107 (343)
                      +.++|+|+.|.|..++.+++++.+.+++.+++.......|++..|..++|+++++++++      .+|..+++++|++|+
T Consensus        32 ~~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~  111 (416)
T 1bw0_A           32 PKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCS  111 (416)
T ss_dssp             CSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEES
T ss_pred             CCCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeC
Confidence            46789999999864445788999999999998765556898888999999999999982      256667889999999


Q ss_pred             ChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcc
Q 019298          108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCG  187 (343)
Q Consensus       108 g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG  187 (343)
                      |+++++..++++++++||+|+++.|+|..+...++..|.+++.+++++++++.+|+++|++.++++++++++++|+||||
T Consensus       112 g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG  191 (416)
T 1bw0_A          112 GGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCG  191 (416)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTTTC
T ss_pred             ChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhccCCeEEEEeCCCCCCC
Confidence            99999999999999999999999999999999999999999999887655678999999999988889999999999999


Q ss_pred             cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC----CCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCC-
Q 019298          188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK----PFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP-  262 (343)
Q Consensus       188 ~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~----~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~-  262 (343)
                      .+++.+++++|+++|++||+++|+||+|..+.+++.    ...++..+...+++++++|+||.|+++|+|+||++++++ 
T Consensus       192 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~  271 (416)
T 1bw0_A          192 SNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPH  271 (416)
T ss_dssp             CCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTT
T ss_pred             cccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCch
Confidence            999999999999999999999999999999988765    444555555555789999999999999999999999764 


Q ss_pred             CCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEee
Q 019298          263 CGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKY  340 (343)
Q Consensus       263 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~  340 (343)
                      ...   ..+...++......++++++.|.++ ..+|+. ...+++ .+++++++++.+.+.|+++||+.+..|++|+|+|
T Consensus       272 ~~~---~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~  347 (416)
T 1bw0_A          272 GNG---PSFLEGLKRVGMLVCGPCTVVQAAL-GEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLM  347 (416)
T ss_dssp             CSC---HHHHHHHHHHHHHHTCSCHHHHHHH-HHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEE
T ss_pred             hhH---HHHHHHHHHHhccccCCCcHHHHHH-HHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEE
Confidence            211   1344444433222456788888888 666653 134444 8888999999999999998899877888999999


Q ss_pred             ec
Q 019298          341 LD  342 (343)
Q Consensus       341 ~~  342 (343)
                      ++
T Consensus       348 ~~  349 (416)
T 1bw0_A          348 SR  349 (416)
T ss_dssp             EE
T ss_pred             Ee
Confidence            75

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1e-43  Score=333.67  Aligned_cols=295  Identities=23%  Similarity=0.359  Sum_probs=253.2

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      +.++|||+.|.|+    +++++.+.+++.+++.......|++..|.+++|+++++++.+.+|.++++++|++|+|+++++
T Consensus        56 ~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al  131 (447)
T 3b46_A           56 GRELINLGQGFFS----YSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGI  131 (447)
T ss_dssp             TSCCEECCCCSCS----SCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHH
T ss_pred             CCCeEEccCCCCC----CCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHH
Confidence            6689999999964    567899999999998753346899988999999999999988888888889999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCC----------CCCCCHHHHHhhhcCCceEEEEeCCC
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK----------GWEVDLDDIESLADQNTVALVIINPG  183 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~----------~~~~d~~~l~~~~~~~~~~i~~~~p~  183 (343)
                      ..++++++++||+|++++|+|..+...++..|.+++.+++++++          ++.+|+++|+++++++++++++++|+
T Consensus       132 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~  211 (447)
T 3b46_A          132 LSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPH  211 (447)
T ss_dssp             HHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEEESSC
T ss_pred             HHHHHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEEEEeCCC
Confidence            99999999999999999999999999999999999999886543          57899999999998888999999999


Q ss_pred             CCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccccc--CCCCCEEEEccCccccCCCCCcEEEEEE-e
Q 019298          184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF--GSTVPILTLGSLSKRWIVPGWRLGWFVT-T  260 (343)
Q Consensus       184 nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~--~~~~~~i~~~S~sK~~~~~G~r~G~i~~-~  260 (343)
                      ||||.+++.+++++|+++|++||+++|+||+|..+.+++ ...++..+  +..+++++++|+||.|+++|+|+||+++ +
T Consensus       212 nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~  290 (447)
T 3b46_A          212 NPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD-SFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLN  290 (447)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSC
T ss_pred             CCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCC-CCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCC
Confidence            999999999999999999999999999999999998876 32334333  1235899999999999999999999998 4


Q ss_pred             CCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhh--HHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCc
Q 019298          261 DPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTI--MQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGS  336 (343)
Q Consensus       261 ~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~--~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g  336 (343)
                              +++++.++.... ..++++++.|.++ ..+|...  ..+++ .+++++++++.+.+.|+++ |+.+..|++|
T Consensus       291 --------~~l~~~l~~~~~~~~~~~~~~~~~a~-~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g  360 (447)
T 3b46_A          291 --------AELLSYAAKAHTRICFASPSPLQEAC-ANSINDALKIGYFEKMRQEYINKFKIFTSIFDEL-GLPYTAPEGT  360 (447)
T ss_dssp             --------HHHHHHHHHHHHHHTSSCCHHHHHHH-HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH-TCCEECCSBS
T ss_pred             --------HHHHHHHHHHHhhccCCCChHHHHHH-HHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCee
Confidence                    368888876542 3556788888887 6666653  34444 8899999999999999988 8887789999


Q ss_pred             eEeeecC
Q 019298          337 SLKYLDL  343 (343)
Q Consensus       337 ~~~~~~l  343 (343)
                      +|+|+++
T Consensus       361 ~~~~~~~  367 (447)
T 3b46_A          361 YFVLVDF  367 (447)
T ss_dssp             SEEEEEC
T ss_pred             EEEEEec
Confidence            9999874

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}

Probab=100.00  E-value=4.6e-43  Score=323.52  Aligned_cols=316  Identities=20%  Similarity=0.289  Sum_probs=257.4

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~   80 (343)
                      |.+| |..+.+++  .+..+.....+-.   .+++++|||+.|++.    +++++.+.+++.+++.+. ...|++..|..
T Consensus         3 ~~~~-~~~~~~~~--~~~~~~~~~~~~~---~~g~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~   71 (391)
T 3h14_A            3 LKNS-SRSAVDPF--IVMDVMEAARRAE---EAGRRIIHMEVGQPG----TGAPRGAVEALAKSLETD-ALGYTVALGLP   71 (391)
T ss_dssp             CCCC-STTCCCCC--TTHHHHHHHHHHH---HTTCCCEECCCSSCS----SCSCHHHHHHHHHHHC-----------CCH
T ss_pred             chhh-hHhhcCcc--hHHHHHHHHHHHH---hcCCCeEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCChH
Confidence            4677 88888877  6666665544432   237789999999954    677899999999988754 35899888999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (343)
                      ++|+++++++.+.+|.++++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.+++++++++.
T Consensus        72 ~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~  151 (391)
T 3h14_A           72 ALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQ  151 (391)
T ss_dssp             HHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTS
T ss_pred             HHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCC
Confidence            99999999999888888999999999999999999999999999999999999999999999999999999998767788


Q ss_pred             CCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEE
Q 019298          161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL  240 (343)
Q Consensus       161 ~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~  240 (343)
                      +|++++++.   +++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++... ....+  .++++++
T Consensus       152 ~d~~~l~~~---~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~--~~~~i~~  225 (391)
T 3h14_A          152 PVPADFAGL---DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAV-TALEL--TDECYVI  225 (391)
T ss_dssp             CCHHHHTTS---CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCC-CGGGT--CSSSEEE
T ss_pred             CCHHHHHhc---CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCc-Chhhc--CCCEEEE
Confidence            999999887   78999999999999999999999999999999999999999999998876532 22222  4678999


Q ss_pred             ccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHH
Q 019298          241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSC  318 (343)
Q Consensus       241 ~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~  318 (343)
                      +|+||.|+++|+|+||+++++        ++++.++.... ...+++++.+.++ .++|.. .++++ .+++++++++.+
T Consensus       226 ~s~sK~~g~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~-~~~~~~~~~~~~~~~~~l  295 (391)
T 3h14_A          226 NSFSKYFSMTGWRVGWMVVPE--------DQVRVVERIAQNMFICAPHASQVAA-LAALDC-DAELQANLDVYKANRKLM  295 (391)
T ss_dssp             EESSSTTCCTTSCCEEEECCG--------GGHHHHHHHHHHTTCCCCHHHHHHH-HHHTTC-HHHHHHHHHHHHHHHHHH
T ss_pred             EechhccCCccceeEEEEeCH--------HHHHHHHHHHhhhccCCCHHHHHHH-HHHhCC-hHHHHHHHHHHHHHHHHH
Confidence            999999999999999999853        57777776643 3457788888877 566663 44554 889999999999


Q ss_pred             HHhhcCCCCceeeCCCCceEeeecC
Q 019298          319 VPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       319 ~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      .+.|++++...+..|++++|+|+++
T Consensus       296 ~~~l~~~~~~~~~~~~~~~~~~~~~  320 (391)
T 3h14_A          296 LERLPKAGFTRIAPPDGAFYVYADV  320 (391)
T ss_dssp             HHHHHHHTCCCBCCCCBTTEEEEEC
T ss_pred             HHHHHHcCCCcccCCCeeEEEEEec
Confidence            9999988333356889999999864

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*

Probab=100.00  E-value=2.3e-43  Score=331.01  Aligned_cols=315  Identities=20%  Similarity=0.324  Sum_probs=262.3

Q ss_pred             ccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCH
Q 019298            3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLP   80 (343)
Q Consensus         3 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~   80 (343)
                      +|+|....+++  +++.+.....        ++++|+|+.|.|+.  .+.+++.+.+++.+++...  ...+|+++.|.+
T Consensus        54 ~s~~~~~~~~s--~~~~~~~~~~--------~~~~i~l~~g~p~~--~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~  121 (448)
T 3aow_A           54 FSKKALEMRAS--EVRELLKLVE--------TSDIISLAGGLPNP--KTFPKEIIRDILVEIMEKYADKALQYGTTKGFT  121 (448)
T ss_dssp             CCHHHHHCCCC--HHHHHHHHHH--------TSSSEECCCCCCCG--GGSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCH
T ss_pred             hhHHHhcCCCc--HHHHHHHhcc--------CCCcEeCCCCCCCc--hhCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcH
Confidence            66777777777  6666655321        34689999999763  2447788999998888653  235799888999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (343)
                      +||+++++++.+.+|.+ ++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.++++++   +
T Consensus       122 ~lr~~ia~~~~~~~g~~-~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~---g  197 (448)
T 3aow_A          122 PLRETLMKWLGKRYGIS-QDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDE---G  197 (448)
T ss_dssp             HHHHHHHHHHHHHHCCC-TTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT---E
T ss_pred             HHHHHHHHHHHHhcCcC-ChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCC---C
Confidence            99999999997777776 8899999999999999999999999999999999999999999999999999988642   4


Q ss_pred             CCHHHHHhhhc----C--CceEE-EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298          161 VDLDDIESLAD----Q--NTVAL-VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (343)
Q Consensus       161 ~d~~~l~~~~~----~--~~~~i-~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~  233 (343)
                      +|+++|++.++    +  +++++ ++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++....++..++.
T Consensus       198 ~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~  277 (448)
T 3aow_A          198 MKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDN  277 (448)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCT
T ss_pred             CCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCC
Confidence            89999999887    5  67887 46899999999999999999999999999999999999999987765556666666


Q ss_pred             CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhh--HHHHH-HHH
Q 019298          234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTI--MQIMI-HGN  309 (343)
Q Consensus       234 ~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~--~~~l~-~~~  309 (343)
                      .+++++++||||.|+ +|+|+||++++        +++++++..... ...+++++.|.++ ..+|.+.  .++++ .++
T Consensus       278 ~~~vi~~~S~SK~~~-~GlriG~v~~~--------~~l~~~l~~~~~~~~~~~~~~~q~a~-~~~L~~~~~~~~~~~~~~  347 (448)
T 3aow_A          278 EGRVIYLGTFSKILA-PGFRIGWMVGD--------PGIIRKMEIAKQSTDLCTNVFGQVVA-WRYVDGGYLEKHIPEIRK  347 (448)
T ss_dssp             TSCEEEEEESTTTTC-GGGCCEEEEEC--------HHHHHHHHHHHHHHHSSCCHHHHHHH-HHHHHTTHHHHHHHHHHH
T ss_pred             CCCEEEEccchhhcc-ccccEEEEEeC--------HHHHHHHHHHHHHhcCCCCHHHHHHH-HHHHHhCCHHHHHHHHHH
Confidence            678999999999998 99999999995        368888876643 2456788999888 6667653  34444 788


Q ss_pred             HHHHHHHHHHHhhcC-CC-CceeeCCCCceEeeecC
Q 019298          310 FLENFAGSCVPSYKL-IP-ELINFKSTGSSLKYLDL  343 (343)
Q Consensus       310 ~~~~~~~~~~~~L~~-~~-g~~~~~~~~g~~~~~~l  343 (343)
                      .++++++.+.+.|++ +| |+.+..|++|+|+|+++
T Consensus       348 ~~~~~~~~l~~~L~~~~~~g~~~~~p~~g~~~~v~~  383 (448)
T 3aow_A          348 FYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTL  383 (448)
T ss_dssp             HHHHHHHHHHHHHHHHCCTTCEECCCSBSSEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhCCCCeEEeCCCccEEEEEEc
Confidence            899999999999987 67 68877899999999875

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*

Probab=100.00  E-value=3.5e-43  Score=326.16  Aligned_cols=316  Identities=22%  Similarity=0.319  Sum_probs=266.7

Q ss_pred             cCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHH
Q 019298            4 SNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR   83 (343)
Q Consensus         4 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr   83 (343)
                      |+|....+++  .++.+...    .    .+.++|+|+.|.|+    +++++.+.+++++++......+|++..|..++|
T Consensus         2 ~~~~~~~~~~--~~~~~~~~----~----~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~   67 (410)
T 3e2y_A            2 AKRIEGLDSN--VWVEFTKL----A----ADPSVVNLGQGFPD----ISPPSYVKEELSKAAFIDNMNQYTRGFGHPALV   67 (410)
T ss_dssp             CGGGTTCCCC--HHHHTTTT----T----TSTTSEECSSCCCC----SCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHH
T ss_pred             chhhccCCcc--HHHHHHHH----h----cCCCeEEecCCCCC----CCCCHHHHHHHHHHHhCccccCCCCCCChHHHH
Confidence            5666777766  45544321    1    25678999999954    778999999999998765566899988999999


Q ss_pred             HHHHHHHhhhCCCCCCC-CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCC-------
Q 019298           84 RAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP-------  155 (343)
Q Consensus        84 ~~ia~~~~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-------  155 (343)
                      +++++++.+.+|..+++ ++|++|+|+++++..++++++++||+|+++.|+|..+...+...|.+++.+++.+       
T Consensus        68 ~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~  147 (410)
T 3e2y_A           68 KALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMK  147 (410)
T ss_dssp             HHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSC
T ss_pred             HHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecccccccccc
Confidence            99999999888888888 8999999999999999999999999999999999999999999999999998763       


Q ss_pred             --CCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC-
Q 019298          156 --DKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-  232 (343)
Q Consensus       156 --~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~-  232 (343)
                        +.++.+|+++++++++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++....++..+. 
T Consensus       148 ~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  227 (410)
T 3e2y_A          148 WTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPG  227 (410)
T ss_dssp             CBGGGEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTT
T ss_pred             ccccCCcCCHHHHHhhcCCCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCC
Confidence              24567899999999988899999999999999999999999999999999999999999999998876555555554 


Q ss_pred             CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchh-------hHHH
Q 019298          233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLST-------IMQI  304 (343)
Q Consensus       233 ~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~-------~~~~  304 (343)
                      ..+++++++|+||.|+++|+|+||++++        +++++.++.... ..++++++.+.++ ..+|.+       ...+
T Consensus       228 ~~~~~i~~~S~sK~~g~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~  298 (410)
T 3e2y_A          228 MWERTITIGSAGKTFSVTGWKLGWSIGP--------AHLIKHLQTVQQNSFYTCATPLQAAL-AEAFWIDIKRMDDPECY  298 (410)
T ss_dssp             CGGGEEEEEEHHHHSSCGGGCCEEEECC--------HHHHHHHHHHHHTTTCCCCHHHHHHH-HHHHHHHHTTTTSTTSH
T ss_pred             ccCeEEEEecchhhcCCCCceEEEEEEC--------HHHHHHHHHHHHhhccCCChHHHHHH-HHHHHhhhccccchHHH
Confidence            3468999999999999999999999985        368888876653 3567788888888 555542       2344


Q ss_pred             HH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          305 MI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       305 l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++ .+++++++++.+.+.|+++ |+.+..|++|+|+|+++
T Consensus       299 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~  337 (410)
T 3e2y_A          299 FNSLPKELEVKRDRMVRLLNSV-GLKPIVPDGGYFIIADV  337 (410)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT-TCEEEBCSBSSEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHC-CCeecCCCccEEEEEEc
Confidence            44 8889999999999999998 89988999999999864

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}

Probab=100.00  E-value=5.5e-43  Score=323.64  Aligned_cols=325  Identities=19%  Similarity=0.305  Sum_probs=263.9

Q ss_pred             CcccCccccC--cCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC---CCCCCC
Q 019298            1 MEISNGGIDN--TGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK---FNGYAP   75 (343)
Q Consensus         1 ~~~s~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Y~~   75 (343)
                      |.+|+|..+.  .++  .++.+.....+-.. ..+++++|||+.|.|.    +++++.+.+++++++.+..   ...|++
T Consensus         2 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~y~~   74 (398)
T 3ele_A            2 MVVNESMYQLGSVRS--AIRELFEYGKKRAA-IVGKENVYDFSIGNPS----IPAPQIVNDTIKELVTDYDSVALHGYTS   74 (398)
T ss_dssp             CSSCHHHHHHHHCCC--HHHHHHHHHHHHHH-HHCGGGCEECCSCCCC----SCCCHHHHHHHHHHHHHSCHHHHHSCCC
T ss_pred             cchhHHHhccccCch--hHHHHHHHHHHHHh-hcCCCCeEEeecCCCC----CCCCHHHHHHHHHHHhcCCccccCCcCC
Confidence            6788888887  455  56766554432221 1235689999999754    6678999999999887632   468988


Q ss_pred             CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCC-CeEEEeCCCCcchHHHHHhcCceeEEeecC
Q 019298           76 TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLL  154 (343)
Q Consensus        76 ~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~  154 (343)
                      ..|.+++|+++++++.+.+|.++++++|++|+|+++++..++++++++| |+|+++.|+|..+...++..|.+++.++++
T Consensus        75 ~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~  154 (398)
T 3ele_A           75 AQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPAD  154 (398)
T ss_dssp             TTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCC
T ss_pred             CCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecC
Confidence            8899999999999999988988999999999999999999999999999 999999999999999999999999999886


Q ss_pred             CCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhh------cCcEEEEccCCCccccCCCCCCcc
Q 019298          155 PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK------LKTLVIADEVYGHLVFGDKPFVPM  228 (343)
Q Consensus       155 ~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~------~~~~~i~D~ay~~~~~~~~~~~~~  228 (343)
                      + +++.+|+++|+++++++++++++++||||||.+++.+++++|+++|++      ||+++|+||+|..+.+++......
T Consensus       155 ~-~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~  233 (398)
T 3ele_A          155 T-EHFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFV  233 (398)
T ss_dssp             T-TTSSCCHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCG
T ss_pred             C-cCCcCCHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCCh
Confidence            5 367899999999998889999999999999999999999999999999      999999999999998876543332


Q ss_pred             cccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc--cccCcchHHHHHHHhccchhhHHHHH
Q 019298          229 GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD--ILGDPATFIQVCIMYGCLSTIMQIMI  306 (343)
Q Consensus       229 ~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~a~~~~~l~~~~~~l~  306 (343)
                      .  ...+++++++|+||.|+++|+|+||+++++..  .....+.+.+.....  ...+++.+.|.++ ..++.+..    
T Consensus       234 ~--~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~----  304 (398)
T 3ele_A          234 T--KYYDNTLVCYSYSKSLSLPGERIGYVLVPDEV--YDKAELYAAVCGAGRALGYVCAPSLFQKMI-VKCQGATG----  304 (398)
T ss_dssp             G--GTCSSEEEEEESTTTSSCTTTCCEEEECCTTS--TTHHHHHHHHHHHHHHTTCCCSCHHHHHHH-TTCTTCCC----
T ss_pred             H--hhcCCeEEEEehhhcCCCccceeEEEEEcchh--hhHHHHHHHHHHHhhhccccCCCHHHHHHH-HHHhcCHH----
Confidence            2  23468899999999999999999999987532  101124444444322  1456777888888 55555321    


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          307 HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       307 ~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      .+++++++++.+.+.|+++ |+.+..+++|+|+|+++
T Consensus       305 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~  340 (398)
T 3ele_A          305 DINAYKENRDLLYEGLTRI-GYHCFKPDGAFYMFVKA  340 (398)
T ss_dssp             CHHHHHHHHHHHHHHHHHH-TCCEECCSBSSEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHc-CCeecCCCeeEEEEEEc
Confidence            5678889999999999887 78888999999999864

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1

Probab=100.00  E-value=2.9e-42  Score=317.64  Aligned_cols=317  Identities=22%  Similarity=0.329  Sum_probs=263.3

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~   80 (343)
                      |..|+|.....++  .+..+.. ...       ..+.|+|+.|.++    +++++.+.+++.+++... ...|++..|..
T Consensus         6 ~~~~~~~~~~~~~--~~~~~~~-~~~-------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~   70 (386)
T 1u08_A            6 LIPQSKLPQLGTT--IFTQMSA-LAQ-------QHQAINLSQGFPD----FDGPRYLQERLAHHVAQG-ANQYAPMTGVQ   70 (386)
T ss_dssp             CCCCCSCCCCCCC--HHHHHHH-HHH-------HTTCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCH
T ss_pred             CccchhhhcCCcc--HHHHHHH-HHh-------cCCeEEecCCCCC----CCCCHHHHHHHHHHHHhh-ccCCCCCCCCH
Confidence            3457777777666  3333322 221       2467999999853    567899999999988753 45898888999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC
Q 019298           81 LTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW  159 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  159 (343)
                      ++|+++++++.+.+|.+++++ +|++|+|+++++..++++++++||+|++++|+|+.+...++..|.+++.++++.+ ++
T Consensus        71 ~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~  149 (386)
T 1u08_A           71 ALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPP-HF  149 (386)
T ss_dssp             HHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTT-TC
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcc-cC
Confidence            999999999988788788898 9999999999999999999999999999999999999999999999999988653 57


Q ss_pred             CCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC-CCCCEE
Q 019298          160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPIL  238 (343)
Q Consensus       160 ~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~-~~~~~i  238 (343)
                      .+|+++|++.++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++....++..+. ..++++
T Consensus       150 ~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i  229 (386)
T 1u08_A          150 RVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAV  229 (386)
T ss_dssp             CCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEE
T ss_pred             cCCHHHHHHhhcccCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEE
Confidence            7999999999988889999999999999999999999999999999999999999999988765444444332 245789


Q ss_pred             EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHH
Q 019298          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAG  316 (343)
Q Consensus       239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~  316 (343)
                      +++|+||.|+++|+|+||++++        ++++++++.... ..++++++.|.++ ..+|.....+++ .+++++++++
T Consensus       230 ~~~s~sK~~~~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~  300 (386)
T 1u08_A          230 AVSSFGKTYHMTGWKVGYCVAP--------APISAEIRKVHQYLTFSVNTPAQLAL-ADMLRAEPEHYLALPDFYRQKRD  300 (386)
T ss_dssp             EEEEHHHHTTCGGGCCEEEECC--------HHHHHHHHHHHHHHTSSCCHHHHHHH-HHHHHHCTHHHHTHHHHHHHHHH
T ss_pred             EEecchhhcCCcccceEEEEcC--------HHHHHHHHHHHHhhccCCChHHHHHH-HHHHhCCcHHHHHHHHHHHHHHH
Confidence            9999999999999999999985        368888876643 2456777888777 666665445565 8899999999


Q ss_pred             HHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          317 SCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       317 ~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      .+.+.|+++ |+.+..+++|+|+|+++
T Consensus       301 ~l~~~L~~~-g~~~~~~~~g~~~~~~~  326 (386)
T 1u08_A          301 ILVNALNES-RLEILPCEGTYFLLVDY  326 (386)
T ss_dssp             HHHHHTTSS-SCEECCCCBSSEEEEEC
T ss_pred             HHHHHHHHC-CCeecCCCceEEEEEec
Confidence            999999998 88887888999999864

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.1e-42  Score=321.20  Aligned_cols=318  Identities=26%  Similarity=0.353  Sum_probs=264.6

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~   80 (343)
                      |.+|+|....+++  .+..+... ..       ..+.|+|+.|.++    +++++.+.+++.+++.+. ...|++..|..
T Consensus         1 ~~~~~~~~~~~~~--~~~~~~~~-~~-------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~   65 (411)
T 2o0r_A            1 MATVSRLRPYATT--VFAEMSAL-AT-------RIGAVNLGQGFPD----EDGPPKMLQAAQDAIAGG-VNQYPPGPGSA   65 (411)
T ss_dssp             -CCCGGGGGGSSC--HHHHHHHH-HH-------TTTCEESSCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCH
T ss_pred             CchhhHhHhcCcc--HHHHHHHH-hh-------cCCeeeccCcCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCH
Confidence            7889999988877  45444332 11       3457999999853    567899999999998753 45899888899


Q ss_pred             HHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCC-CC
Q 019298           81 LTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD-KG  158 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~  158 (343)
                      ++|+++++++.+.+|.+++++ +|++|+|+++++..++++++++||+|++++|+|..+...+...|.+++.++++++ ++
T Consensus        66 ~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~  145 (411)
T 2o0r_A           66 PLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRG  145 (411)
T ss_dssp             HHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTE
T ss_pred             HHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccC
Confidence            999999999988788778888 9999999999999999999999999999999999999999999999999987653 34


Q ss_pred             CCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCE
Q 019298          159 WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPI  237 (343)
Q Consensus       159 ~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~  237 (343)
                      +.+|+++|+++++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++..+.++..+.. .+++
T Consensus       146 ~~~d~~~l~~~l~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~  225 (411)
T 2o0r_A          146 FALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERT  225 (411)
T ss_dssp             EECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGE
T ss_pred             CCCCHHHHHHhhccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCE
Confidence            679999999999888899999999999999999999999999999999999999999999887655445544433 4578


Q ss_pred             EEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHH
Q 019298          238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFA  315 (343)
Q Consensus       238 i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~  315 (343)
                      ++++|+||.|+++|+|+||++++        +++++.++.... ..++.+++.|.++ ..+|....++++ .++++++++
T Consensus       226 i~~~s~sK~~~~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~  296 (411)
T 2o0r_A          226 ITISSAAKMFNCTGWKIGWACGP--------AELIAGVRAAKQYLSYVGGAPFQPAV-ALALDTEDAWVAALRNSLRARR  296 (411)
T ss_dssp             EEEEEHHHHTTCTTTCEEEEECC--------HHHHHHHHHHHHHHTSCCCTTHHHHH-HHHHHHCHHHHHHHHHHHHHHH
T ss_pred             EEEeechhhcCCccceEEEEeeC--------HHHHHHHHHHHhhccCCCChHHHHHH-HHHHhCChHHHHHHHHHHHHHH
Confidence            99999999999999999999984        467887776543 2455677777777 566664445555 888999999


Q ss_pred             HHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          316 GSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       316 ~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +.+.+.|+++ |+.+..+++|+|+|+++
T Consensus       297 ~~l~~~L~~~-g~~~~~~~~g~~~~~~~  323 (411)
T 2o0r_A          297 DRLAAGLTEI-GFAVHDSYGTYFLCADP  323 (411)
T ss_dssp             HHHHHHHHHH-TCEECCCCBSSEEEEEC
T ss_pred             HHHHHHHHHc-CCEecCCCeeEEEEEec
Confidence            9999999887 88877888999999864

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}

Probab=100.00  E-value=1.6e-42  Score=320.24  Aligned_cols=318  Identities=19%  Similarity=0.270  Sum_probs=259.6

Q ss_pred             cCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHH
Q 019298            4 SNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR   83 (343)
Q Consensus         4 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr   83 (343)
                      +++....+++  ++..+........+  .+++++|||+.|++.    ++.++.+.+++.+++.  ....|++..|.+++|
T Consensus         3 ~~~~~~~~~~--~~~~~~~~~~~~~~--~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~g~~~lr   72 (396)
T 3jtx_A            3 NTLLKQLKPY--PFARLHEAMQGISA--PEGMEAVPLHIGEPK----HPTPKVITDALTASLH--ELEKYPLTAGLPELR   72 (396)
T ss_dssp             HHHHHHCCSC--HHHHHHHHTTTCCC--CTTCCCEECSCCSCC----SCCCHHHHHHHHHTGG--GGGSCCCTTCCHHHH
T ss_pred             hhhhccCCCC--hHHHHHHHHHhhhh--ccCCCeEEeCCcCCC----CCCCHHHHHHHHHHhh--hccCCCCCCCcHHHH
Confidence            3445555655  55555443332211  347889999999944    6788999999999875  346899988999999


Q ss_pred             HHHHHHHhhhCCCC-CCCC-cEEEecChHHHHHHHHHHhcCCC-----CeEEEeCCCCcchHHHHHhcCceeEEeecCCC
Q 019298           84 RAIAEYLSRDLPYK-LTPN-DVFVTSGCTQAIDVAMALLSRPG-----ANILLPRPGFPIYELSAAFRHIEVRHFDLLPD  156 (343)
Q Consensus        84 ~~ia~~~~~~~~~~-~~~~-~i~~~~g~~~al~~~~~~l~~~g-----d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~  156 (343)
                      +++++++.+.+|.. ++++ +|++|+|+++++..++++++++|     |+|+++.|+|..+...++..|.+++.+++ .+
T Consensus        73 ~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~  151 (396)
T 3jtx_A           73 QACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANC-PA  151 (396)
T ss_dssp             HHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEEC-CT
T ss_pred             HHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeec-CC
Confidence            99999999888877 7889 99999999999999999999996     79999999999999999999999999998 44


Q ss_pred             CCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccc----cC
Q 019298          157 KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV----FG  232 (343)
Q Consensus       157 ~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~----~~  232 (343)
                      +++.+|+++++++++++++++++++||||||.+++.+++++|+++|++||+++|+||+|..+.+++..+.....    +.
T Consensus       152 ~g~~~d~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~  231 (396)
T 3jtx_A          152 PSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLG  231 (396)
T ss_dssp             TTCCCCGGGSCHHHHHTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTT
T ss_pred             CCCccCHHHHHHhhccCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcc
Confidence            67788999999998888999999999999999999999999999999999999999999999887633222211    11


Q ss_pred             -CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHHHHHH
Q 019298          233 -STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMIHGNF  310 (343)
Q Consensus       233 -~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~  310 (343)
                       ..+++++++|+||.|+++|+|+||++++        +++++.++.... ..++++++.|.++ .++|.......+.+++
T Consensus       232 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~  302 (396)
T 3jtx_A          232 RSRQKLLMFTSLSKRSNVPGLRSGFVAGD--------AELLKNFLLYRTYHGSAMSIPVQRAS-IAAWDDEQHVIDNRRL  302 (396)
T ss_dssp             CCCTTEEEEEESTTTSSCGGGCCEEEEEC--------HHHHHHHHHHHHHHTCCCCHHHHHHH-HHHHHCCHHHHHHHHH
T ss_pred             cccCcEEEEeccccccCCcccceEEEEeC--------HHHHHHHHHHHhhcccCCCHHHHHHH-HHHhCCHHHHHHHHHH
Confidence             2468999999999999999999999884        478888877654 2467788888888 6666653333348899


Q ss_pred             HHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          311 LENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       311 ~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++++++.+.+.|+++  +.+..|++|+|+|+++
T Consensus       303 ~~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~~  333 (396)
T 3jtx_A          303 YQEKFERVIPILQQV--FDVKLPDASFYIWLKV  333 (396)
T ss_dssp             HHHHHHHHHHHHTTT--SCCCCCSSSSEEEEEC
T ss_pred             HHHHHHHHHHHHHhc--CCccCCCeeEEEEEEC
Confidence            999999999999876  4566789999999875

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*

Probab=100.00  E-value=1.1e-42  Score=322.12  Aligned_cols=324  Identities=16%  Similarity=0.131  Sum_probs=253.1

Q ss_pred             cccCcCccccHHHHHHHHHhhccccccccceeEeccCCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHH
Q 019298            7 GIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRA   85 (343)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~   85 (343)
                      ....+++  ++..+...+..+.     .+.+|+|+.|.| +.....+..+.+++++.+........+|++..|.+++|++
T Consensus         7 ~~~~~~~--~i~~~~~~~~~~~-----~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~   79 (401)
T 7aat_A            7 VEMGPPD--PILGVTEAFKRDT-----NSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRA   79 (401)
T ss_dssp             CCCCCCC--HHHHHHHHHHHCC-----CTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHH
T ss_pred             CCCCCCC--hhHHHHHHHhhCC-----CCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHH
Confidence            3444444  6778877776654     556899999997 4332334567889988887764445689998999999999


Q ss_pred             HHHHHhhhCCCCCCCCcEEE--ecChHHHHHHHHHHhc---CCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298           86 IAEYLSRDLPYKLTPNDVFV--TSGCTQAIDVAMALLS---RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (343)
Q Consensus        86 ia~~~~~~~~~~~~~~~i~~--~~g~~~al~~~~~~l~---~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (343)
                      +++++.+.+|..+++++|++  |+|+++++..+++.+.   ++||+|++++|+|..+...++..|.+++.++++.++++.
T Consensus        80 ia~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  159 (401)
T 7aat_A           80 SAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCS  159 (401)
T ss_dssp             HHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTE
T ss_pred             HHHHhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCc
Confidence            99999887777778999977  9999999998887764   899999999999999999999999999999986656788


Q ss_pred             CCHHHHHhhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC--CCCccccc-CCC
Q 019298          161 VDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK--PFVPMGVF-GST  234 (343)
Q Consensus       161 ~d~~~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~--~~~~~~~~-~~~  234 (343)
                      +|++.+++.+.   ++++++++++||||||.+++.+++++|+++|++||+++|+||+|..+.+++.  ...++..+ ...
T Consensus       160 ~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~  239 (401)
T 7aat_A          160 LDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQG  239 (401)
T ss_dssp             ECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTT
T ss_pred             cCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcC
Confidence            99997777664   4678889999999999999999999999999999999999999999987653  12222222 344


Q ss_pred             CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchH----HHHHHhhhhc-cccCcchHHHHHHHhccchhh------HH
Q 019298          235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK----VVERMKKYFD-ILGDPATFIQVCIMYGCLSTI------MQ  303 (343)
Q Consensus       235 ~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~----~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~------~~  303 (343)
                      +++++++|+||+|+++|+|+||++++..     +++    +++.++.... ...+++...|.++ ..++.+.      .+
T Consensus       240 ~~~i~~~S~sK~~~~~G~RiG~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~  313 (401)
T 7aat_A          240 IDVVLSQSYAKNMGLYGERAGAFTVICR-----DAEEAKRVESQLKILIRPMYSNPPMNGARIA-SLILNTPELRKEWLV  313 (401)
T ss_dssp             CCCEEEEECTTTSCCGGGCEEEEEEECS-----SHHHHHHHHHHHHHHHHHHHSSCCHHHHHHH-HHHHHCHHHHHHHHH
T ss_pred             CcEEEEecCCcccccccCceEEEEEEeC-----CHHHHHHHHHHHHHHHHhccCCCChHHHHHH-HHHhCCHHHHHHHHH
Confidence            6889999999999999999999987421     234    4455555432 2445666667666 4455442      22


Q ss_pred             HHH-HHHHHHHHHHHHHHhhcCC---CCceeeCCCCceEeeecC
Q 019298          304 IMI-HGNFLENFAGSCVPSYKLI---PELINFKSTGSSLKYLDL  343 (343)
Q Consensus       304 ~l~-~~~~~~~~~~~~~~~L~~~---~g~~~~~~~~g~~~~~~l  343 (343)
                      +++ .+++++++++.+.+.|+++   +++.+..|++|+|+|+++
T Consensus       314 ~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~  357 (401)
T 7aat_A          314 EVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGL  357 (401)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCCCceecCCcceEEecCC
Confidence            233 7889999999999999876   247777899999999864

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}

Probab=100.00  E-value=5.1e-43  Score=324.73  Aligned_cols=294  Identities=19%  Similarity=0.260  Sum_probs=249.0

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~a  112 (343)
                      +.++|||+.|.++    ++.++.+.+++.+++.......|++..|..++|+++++++.+.+|..+++ ++|++|+|++++
T Consensus        46 g~~~idl~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~a  121 (404)
T 2o1b_A           46 PLPLINMAVGIPD----GPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNG  121 (404)
T ss_dssp             SSCCEECCCCSCS----SCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHH
T ss_pred             CCCEEecCCcCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHH
Confidence            5678999999954    56789999999998764334579887899999999999998877877776 799999999999


Q ss_pred             HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       113 l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~  192 (343)
                      +..++++++++||+|+++.|+|..+...++..|.+++.+++++ +++.+|+++|+++++++++++++++|+||||.+++.
T Consensus       122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~  200 (404)
T 2o1b_A          122 LVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEP-PHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATK  200 (404)
T ss_dssp             HHHHHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCT-TTCCCCGGGSCHHHHHHEEEEEECSSCTTTCCCCCH
T ss_pred             HHHHHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCc-ccCcCCHHHHHHhhccCceEEEEcCCCCCCCccCCH
Confidence            9999999999999999999999999999999999999998865 567789999999887778899999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC-CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  271 (343)
                      +++++|+++|+++|+++|+||+|..+.+++. +.++..+. ..+++++++|+||.|+++|+|+||++++        +++
T Consensus       201 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~~  271 (404)
T 2o1b_A          201 EVFDEAIAKFKGTDTKIVHDFAYGAFGFDAK-NPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGN--------KDM  271 (404)
T ss_dssp             HHHHHHHHHHTTSSCEEEEECTTTTCBSSSC-CCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEEC--------HHH
T ss_pred             HHHHHHHHHHHHcCCEEEEEccchhcccCCC-CCChhhcCCCCCCEEEEEecchhccCchhheEeEecC--------HHH
Confidence            9999999999999999999999999887652 23333332 2357899999999999999999999884        478


Q ss_pred             HHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          272 VERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       272 ~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +++++.... ...+++++.|.++ ..+|+....+++ .+++++++++.+.+.|+++ |+.+..+++|+|+|+++
T Consensus       272 ~~~l~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~  343 (404)
T 2o1b_A          272 IQALKKYQTHTNAGMFGALQDAA-IYALNHYDDFLEEQSNVFKTRRDRFEAMLAKA-DLPFVHAKGGIYVWLET  343 (404)
T ss_dssp             HHHHHHHHHHHCCCCCHHHHHHH-HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEECCCBSSEEEEEC
T ss_pred             HHHHHHHHhhccCCCCHHHHHHH-HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc-CCeecCCCcceEEEEeC
Confidence            888876643 2457788888887 666665345555 8888999999999999988 88877889999999864

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=4.1e-42  Score=317.08  Aligned_cols=317  Identities=23%  Similarity=0.303  Sum_probs=263.7

Q ss_pred             cCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHH
Q 019298            4 SNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR   83 (343)
Q Consensus         4 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr   83 (343)
                      +++....+++  .+..+.....+...   .+++.|+|+.|.+.    ++.++.+.+++.+++... ...|++..|..++|
T Consensus        15 ~~~~~~~~~~--~~~~~~~~~~~~~~---~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr   84 (389)
T 1o4s_A           15 SRRISEIPIS--KTMELDAKAKALIK---KGEDVINLTAGEPD----FPTPEPVVEEAVRFLQKG-EVKYTDPRGIYELR   84 (389)
T ss_dssp             CHHHHHSCCC--SSHHHHHHHHHHHH---TTCCCEECCCSSCS----SCCCHHHHHHHHHHHTTC-CCCCCCTTCCHHHH
T ss_pred             HHHHhhcCcc--HHHHHHHHHHHHHh---cCCCEEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHH
Confidence            4556667766  56666665554432   26788999999853    566899999999988654 34798878999999


Q ss_pred             HHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCH
Q 019298           84 RAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDL  163 (343)
Q Consensus        84 ~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~  163 (343)
                      +++++++.+.+|..+++++|++|+|+++++..++++++++||+|++++|+|..+...++..|.+++.++.++++++.+|+
T Consensus        85 ~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~  164 (389)
T 1o4s_A           85 EGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSL  164 (389)
T ss_dssp             HHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCH
T ss_pred             HHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCH
Confidence            99999998877877889999999999999999999999999999999999999999999999999999987655678999


Q ss_pred             HHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEcc
Q 019298          164 DDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGS  242 (343)
Q Consensus       164 ~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S  242 (343)
                      ++|+++++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++ ...++..+.. .+++++++|
T Consensus       165 ~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g-~~~~~~~~~~~~~~~i~~~s  243 (389)
T 1o4s_A          165 EEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTD-EFTSILDVSEGFDRIVYING  243 (389)
T ss_dssp             HHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSS-CCCCHHHHCSSSTTEEEEEE
T ss_pred             HHHHHhcccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCC-CCCCHhhcCCCCCcEEEEee
Confidence            99999998888999999999999999999999999999999999999999999988765 2233444432 467899999


Q ss_pred             CccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHh
Q 019298          243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPS  321 (343)
Q Consensus       243 ~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~  321 (343)
                      +||.|+++|+|+||++++        +++++.++.... ..++++++.+.++ ..+|.+.  .-+.+++++++++.+.+.
T Consensus       244 ~sK~~~~~G~r~G~l~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~-~~~l~~~--~~~~~~~~~~~~~~l~~~  312 (389)
T 1o4s_A          244 FSKSHSMTGWRVGYLISS--------EKVATAVSKIQSHTTSCINTVAQYAA-LKALEVD--NSYMVQTFKERKNFVVER  312 (389)
T ss_dssp             STTTTTCGGGCCEEEECC--------HHHHHHHHHHHHHHTCSCCHHHHHHH-HHHTTCC--CHHHHHHHHHHHHHHHHH
T ss_pred             chhhcCCcccceEEEEeC--------HHHHHHHHHHhhhcccCCCHHHHHHH-HHHHhcc--HHHHHHHHHHHHHHHHHH
Confidence            999999999999999985        368888876643 2457788888877 5566543  334788999999999999


Q ss_pred             hcCCCCceeeCCCCceEeeecC
Q 019298          322 YKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       322 L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      |+++ |+.+..+++|+|+|+++
T Consensus       313 L~~~-g~~~~~~~~~~~~~~~~  333 (389)
T 1o4s_A          313 LKKM-GVKFVEPEGAFYLFFKV  333 (389)
T ss_dssp             HHHT-TCCCCCCSBSSEEEEEC
T ss_pred             HHhc-CCeeecCCcceEEEEeC
Confidence            9988 88877888999999864

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}

Probab=100.00  E-value=8.3e-42  Score=324.58  Aligned_cols=301  Identities=21%  Similarity=0.308  Sum_probs=249.4

Q ss_pred             ceeEeccCCCCCCCCCC-------------------------CcHHHHHHHHHHHhcC---CCCCCCCCCCCHHHHHHHH
Q 019298           36 KVISLAMGDPTVHSCFH-------------------------TTHVATEAVAEALLSE---KFNGYAPTAGLPLTRRAIA   87 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~---~~~~Y~~~~g~~~lr~~ia   87 (343)
                      ++|+.++|.|......+                         .++.+.+++.+++...   ....|+++.|.+++|++++
T Consensus        65 ~~i~~~iG~~~~~~~~p~~~~~~~~~~~~~p~~i~~~~~~~~~p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia  144 (500)
T 3tcm_A           65 EILYCNIGNPQSLGQQPVTFFREVLALCDHPDLLQREEIKTLFSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIA  144 (500)
T ss_dssp             SCEECSSCCGGGTTCCCCHHHHHHHHHHHSGGGGGCTTHHHHSCHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHH
T ss_pred             HhhhhcCcChhhcCCCCCcHHHHHHHhhcCcccccCCCCcccCCHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHH
Confidence            78999999874322211                         3444555556666552   4678999999999999999


Q ss_pred             HHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc-CCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHH
Q 019298           88 EYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDI  166 (343)
Q Consensus        88 ~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l  166 (343)
                      +++.+++|.++++++|++|+|+++++..++++++ ++||+|+++.|+|..+...++..|.+++.++++.+++|.+|+++|
T Consensus       145 ~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l  224 (500)
T 3tcm_A          145 SGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDV  224 (500)
T ss_dssp             HHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHH
T ss_pred             HHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHH
Confidence            9999888888999999999999999999999998 899999999999999999999999999999998887899999999


Q ss_pred             HhhhcC------CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC-CCCccc----cc---C
Q 019298          167 ESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVPMG----VF---G  232 (343)
Q Consensus       167 ~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~-~~~~~~----~~---~  232 (343)
                      ++++++      +++++++++||||||.+++.+++++|+++|+++|+++|+||+|+.+.+++. ...++.    .+   .
T Consensus       225 ~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~  304 (500)
T 3tcm_A          225 KKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGE  304 (500)
T ss_dssp             HHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSS
T ss_pred             HHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhcccc
Confidence            999876      678999999999999999999999999999999999999999999998643 333432    12   2


Q ss_pred             CCCCEEEEccCcccc-CCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhh-------HHH
Q 019298          233 STVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTI-------MQI  304 (343)
Q Consensus       233 ~~~~~i~~~S~sK~~-~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~-------~~~  304 (343)
                      ...++++++||||+| |++|+|+||+++.+.     ++++++.+.+......+++.+.|.++ ..++..+       ..|
T Consensus       305 ~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~  378 (500)
T 3tcm_A          305 EDLPLVSYQSVSKGYYGECGKRGGYFEITGF-----SAPVREQIYKIASVNLCSNITGQILA-SLVMNPPKASDESYASY  378 (500)
T ss_dssp             SCCCEEEEEESSSTTTCCGGGCCEEEEEESC-----CTTHHHHHHHHHHTTCCCCHHHHHHH-HHHHSCCCSSSTHHHHH
T ss_pred             CCeEEEEEecCCccCCCCCccceEEEEEeCC-----CHHHHHHHHHHHhcccCCCHHHHHHH-HHHhcCccccchhHHHH
Confidence            334689999999999 899999999998421     13588888877665678888888888 5555421       123


Q ss_pred             HH----HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298          305 MI----HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD  342 (343)
Q Consensus       305 l~----~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~  342 (343)
                      .+    .+++++++++.+.+.|+++||+.+..|++|+|+|++
T Consensus       379 ~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~  420 (500)
T 3tcm_A          379 KAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQ  420 (500)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBTTEECCE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEecCCeEEEEeee
Confidence            22    788899999999999999999998899999999953

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1

Probab=100.00  E-value=2.2e-42  Score=320.66  Aligned_cols=326  Identities=26%  Similarity=0.398  Sum_probs=260.0

Q ss_pred             cccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHH
Q 019298            2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPL   81 (343)
Q Consensus         2 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~   81 (343)
                      .+|+|..+.+++  .+..+. ...+..   ..+++.|+|+.|.+... .++.++.+.+++.+++... ...|++..|..+
T Consensus        11 ~~~~~~~~~~~~--~~~~~~-~~~~~~---~~g~~~i~l~~~~~~~~-~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~   82 (406)
T 1xi9_A           11 RASKRALSVEYA--IRDVVL-PARELE---KKGIKVIRLNIGDPVKF-DFQPPEHMKEAYCKAIKEG-HNYYGDSEGLPE   82 (406)
T ss_dssp             CCCHHHHTCCC----------CHHHHH---HTTCCCEECCCCCGGGT-TCCCCHHHHHHHHHHHHTT-CCSCCCTTCCHH
T ss_pred             hHHHHHhcCChh--HHHHHH-HHHHHH---HcCCCEEEecCCCCCcC-CCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHH
Confidence            356777778777  444544 222222   22678999999996311 3567899999999988654 347988889999


Q ss_pred             HHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCC
Q 019298           82 TRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEV  161 (343)
Q Consensus        82 lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  161 (343)
                      +|+++++++.+.+|.++++++|++|+|+++++..++++++++||+|++++|+|..+...++..|.+++.+++++++++.+
T Consensus        83 l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~  162 (406)
T 1xi9_A           83 LRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQP  162 (406)
T ss_dssp             HHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEE
T ss_pred             HHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcC
Confidence            99999999998888888999999999999999999999999999999999999999999999999999998875456779


Q ss_pred             CHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCC-EEEE
Q 019298          162 DLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTL  240 (343)
Q Consensus       162 d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~-~i~~  240 (343)
                      |+++|++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++ ...++..++ .++ ++++
T Consensus       163 d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~-~~~~~i~~  240 (406)
T 1xi9_A          163 DIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEG-EHISPGSLT-KDVPVIVM  240 (406)
T ss_dssp             CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSS-CCCCHHHHC-SSSCEEEE
T ss_pred             CHHHHHHhhCcCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCC-CCCCHHHcC-CCceEEEE
Confidence            9999999998888999999999999999999999999999999999999999999988743 233444444 456 8999


Q ss_pred             ccCccccCCCCCcEEEEE--EeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHH
Q 019298          241 GSLSKRWIVPGWRLGWFV--TTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGS  317 (343)
Q Consensus       241 ~S~sK~~~~~G~r~G~i~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~  317 (343)
                      +|+||.|+++|+|+||++  ++++.    -.+++++++......++++++.+.++ .++|+...++++ .+++++++++.
T Consensus       241 ~s~sK~~~~~G~r~G~~~~~~~~~~----~~~l~~~l~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~  315 (406)
T 1xi9_A          241 NGLSKVYFATGWRLGYMYFVDPENK----LSEVREAIDRLARIRLCPNTPAQFAA-IAGLTGPMDYLKEYMKKLKERRDY  315 (406)
T ss_dssp             EESTTTTCCGGGCCEEEEEECTTCT----THHHHHHHHHHHHHTCCSCSHHHHHH-HHHHHSCCHHHHHHHHHHHHHHHH
T ss_pred             eccccccCCCccEEEEEEEecCchh----HHHHHHHHHHHHHhhcCCCHHHHHHH-HHHHhCCcHHHHHHHHHHHHHHHH
Confidence            999999999999999998  53100    00577777765432266788888887 666643334444 78899999999


Q ss_pred             HHHhhcCCCCceeeCCCCceEeeec
Q 019298          318 CVPSYKLIPELINFKSTGSSLKYLD  342 (343)
Q Consensus       318 ~~~~L~~~~g~~~~~~~~g~~~~~~  342 (343)
                      +.+.|+++||+.+..|++|+|+|++
T Consensus       316 l~~~L~~~~~~~~~~~~~~~~~~~~  340 (406)
T 1xi9_A          316 IYKRLNEIPGISTTKPQGAFYIFPK  340 (406)
T ss_dssp             HHHHHHTSTTEECCCCCBSSEECCE
T ss_pred             HHHHHHhCCCCeeecCCeeEEEEEe
Confidence            9999999888987788899999975

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=3.3e-42  Score=316.15  Aligned_cols=293  Identities=19%  Similarity=0.234  Sum_probs=247.1

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a  112 (343)
                      +.++|||+.|.++    ++.++.+.+++.+++.......|++..|..++|+++++++.+.+|..++++ +|++|+|++++
T Consensus        24 g~~~idl~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a   99 (376)
T 2dou_A           24 GVGLIDLSIGSTD----LPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEG   99 (376)
T ss_dssp             TCCCEECSSCCCC----CCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHH
T ss_pred             CCCEEeccCCCCC----CCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHH
Confidence            6789999999853    567899999999998654456898766889999999999988778777777 99999999999


Q ss_pred             HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       113 l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~  192 (343)
                      +..+++++.++||+|+++.|+|..+...++..|.+++.+++  ++++.+|++++++.++++++++++++|+||||.+++.
T Consensus       100 ~~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~  177 (376)
T 2dou_A          100 LAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPL--REDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVADW  177 (376)
T ss_dssp             HHHHHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECB--CTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCCCH
T ss_pred             HHHHHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeC--CCCCCCCHHHHHHhhccCceEEEECCCCCCcCccCCH
Confidence            99999999999999999999999999999999999999887  4667789999998887778999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  272 (343)
                      +++++|+++|++||+++|+||+|..+.+++.....+...+..+++++++|+||.|+++|+|+||++++        ++++
T Consensus       178 ~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~--------~~~~  249 (376)
T 2dou_A          178 GYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGS--------EEAL  249 (376)
T ss_dssp             HHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEEC--------HHHH
T ss_pred             HHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecC--------HHHH
Confidence            99999999999999999999999999876532222222233467899999999999999999999884        4788


Q ss_pred             HHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          273 ERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       273 ~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++++.... ...+++++.|.++ ..+|++...+++ .+++++++++.+.+.|+++  +.+..+++|+|+|+++
T Consensus       250 ~~l~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~  319 (376)
T 2dou_A          250 ARLERVKGVIDFNQYAGVLRMG-VEALKTPKEVVRGYARVYRERALGMAEALKGV--LSLLPPRATMYLWGRL  319 (376)
T ss_dssp             HHHHHHHHHHCCCSCHHHHHHH-HHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTT--SEECCCCBSSEEEEEC
T ss_pred             HHHHHHHHhcccCCCHHHHHHH-HHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHh--cCccCCCeeEEEEEEC
Confidence            88877644 2446788888887 666765345555 8889999999999999987  7776788999999864

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*

Probab=100.00  E-value=8.5e-42  Score=318.85  Aligned_cols=318  Identities=23%  Similarity=0.308  Sum_probs=262.9

Q ss_pred             cccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCC
Q 019298            2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGL   79 (343)
Q Consensus         2 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~   79 (343)
                      ++|+|.....++  .+..+.. ...       +.++|+|+.|.++    +++++.+.+++.+++...  ....|++..|.
T Consensus        14 ~~~~~~~~~~~~--~~~~~~~-~~~-------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~   79 (429)
T 1yiz_A           14 DLPKRYQGSTKS--VWVEYIQ-LAA-------QYKPLNLGQGFPD----YHAPKYALNALAAAANSPDPLANQYTRGFGH   79 (429)
T ss_dssp             CSSSSCCCCTTC--HHHHHHH-HHH-------HHCCEECCSSSCS----SCCCHHHHHHHHHHHTCSCGGGGSCCCSSCC
T ss_pred             chhHHhhhCCch--HHHHHHH-Hhc-------cCCEEEecCCCCC----CCCCHHHHHHHHHHHhccccCccCCCCCCCc
Confidence            456777766655  3333322 211       3468999999853    567899999999988652  24579887899


Q ss_pred             HHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCC-
Q 019298           80 PLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK-  157 (343)
Q Consensus        80 ~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-  157 (343)
                      .++|+++++++.+.+|.+++++ +|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.++++.++ 
T Consensus        80 ~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~  159 (429)
T 1yiz_A           80 PRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKT  159 (429)
T ss_dssp             HHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCS
T ss_pred             HHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccc
Confidence            9999999999988778778889 99999999999999999999999999999999999999999999999999887643 


Q ss_pred             -------CCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccc
Q 019298          158 -------GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV  230 (343)
Q Consensus       158 -------~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~  230 (343)
                             ++.+|+++|+++++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+++....++..
T Consensus       160 ~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~  239 (429)
T 1yiz_A          160 GGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICT  239 (429)
T ss_dssp             SSSEEGGGCBCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGG
T ss_pred             cccccccCcccCHHHHHHHhccCceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhh
Confidence                   5679999999999888899999999999999999999999999999999999999999999887655445544


Q ss_pred             cC-CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchh-----h--
Q 019298          231 FG-STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLST-----I--  301 (343)
Q Consensus       231 ~~-~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~-----~--  301 (343)
                      +. ..++++++.|+||.|+++|+|+||++++        +++++.++.... ..++.+++.|.++ ..+|..     .  
T Consensus       240 ~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~  310 (429)
T 1yiz_A          240 LPGMWERTITIGSAGKTFSLTGWKIGWAYGP--------EALLKNLQMVHQNCVYTCATPIQEAI-AVGFETELKRLKSP  310 (429)
T ss_dssp             STTTGGGEEEEEEHHHHHTCGGGCCEEEESC--------HHHHHHHHHHHHTTTCCCCHHHHHHH-HHHHHHHHTTTTST
T ss_pred             ccCCcCceEEEecchhccCCCCcceEEEEeC--------HHHHHHHHHHHhhcccCCChHHHHHH-HHHHhcccccccch
Confidence            43 3467899999999999999999999985        368888876643 3567788888877 666765     2  


Q ss_pred             HHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          302 MQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       302 ~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ..+++ .+++++++++.+.+.|+++ |+.+..+++|+|+|+++
T Consensus       311 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~  352 (429)
T 1yiz_A          311 ECYFNSISGELMAKRDYMASFLAEV-GMNPTVPQGGYFMVADW  352 (429)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHHH-TCEEEECSBSSEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEEc
Confidence            44554 8888999999999999888 78877888999999874

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}

Probab=100.00  E-value=4e-42  Score=318.62  Aligned_cols=296  Identities=19%  Similarity=0.231  Sum_probs=255.6

Q ss_pred             ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEecChHHHHH
Q 019298           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAID  114 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~al~  114 (343)
                      .+|||+.|++.   ++++++.+++++.+++.......|++..|..++++++++++.+.+|..+++ ++|++|+|+++++.
T Consensus        40 ~~id~~~g~~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~  116 (407)
T 3nra_A           40 RPVDFSHGDVD---AHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALF  116 (407)
T ss_dssp             CCEETTSCCTT---TSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHH
T ss_pred             ceeeecCcCCC---CCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHH
Confidence            47999999865   367889999999998875444468888899999999999999888877766 79999999999999


Q ss_pred             HHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCC----CCCCCCCHHHHHhhhcCCceEEEEeCCCCCccccc
Q 019298          115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP----DKGWEVDLDDIESLADQNTVALVIINPGNPCGNVY  190 (343)
Q Consensus       115 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~  190 (343)
                      .++++++++||+|+++.|+|..+...++..|.+++.+++..    ++++.+|+++|+++++++++++++++|+||||.++
T Consensus       117 ~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~  196 (407)
T 3nra_A          117 LAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVY  196 (407)
T ss_dssp             HHHHTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCC
T ss_pred             HHHHHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCccc
Confidence            99999999999999999999999999999999999998843    35678999999999988899999999999999999


Q ss_pred             CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC--CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCc
Q 019298          191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG--STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK  268 (343)
Q Consensus       191 ~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~--~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~  268 (343)
                      +.+++++|+++|++||+++|+||+|+.+.+++....++..+.  ..+++++++|+||.|+++|+|+||++++        
T Consensus       197 ~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------  268 (407)
T 3nra_A          197 SAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGS--------  268 (407)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEEC--------
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcC--------
Confidence            999999999999999999999999999998876665555553  3568999999999999999999999984        


Q ss_pred             hHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          269 PKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       269 ~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +++++.++.... ...+++++.+.++ ..+|.+...+++ .+++++++++.+.+.|+++|++.+..+++|+|+|+++
T Consensus       269 ~~~~~~l~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~  344 (407)
T 3nra_A          269 RAIIARMEKLQAIVSLRAAGYSQAVL-RGWFDEAPGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRL  344 (407)
T ss_dssp             HHHHHHHHHHHHHHTSSSCHHHHGGG-GGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBC
T ss_pred             HHHHHHHHHHHhhhccCCChHHHHHH-HHHHhccchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeC
Confidence            478888877643 3456677888777 677765445555 8888999999999999999899987899999999874

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*

Probab=100.00  E-value=3.3e-42  Score=318.29  Aligned_cols=323  Identities=16%  Similarity=0.137  Sum_probs=256.2

Q ss_pred             ccccCcCccccHHHHHHHHHhhccccccccceeEeccCC---CCCCCCCCCcHHHHHHHHH-HHhcCCCCCCCCCCCCHH
Q 019298            6 GGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGD---PTVHSCFHTTHVATEAVAE-ALLSEKFNGYAPTAGLPL   81 (343)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Y~~~~g~~~   81 (343)
                      +....+++  ++..+...+.++.     ..++|||+.|.   +.  ...+.++.+.+++.+ ++.......|++..|.++
T Consensus         4 ~~~~~~~~--~~~~~~~~~~~~~-----~~~~i~l~~g~y~d~~--~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~   74 (397)
T 3fsl_A            4 KVDAYAGD--PILTLMERFKEDP-----RSDKVNLSIGLYYNED--GIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNC   74 (397)
T ss_dssp             TCCCCCCC--HHHHHHHHHHTCC-----CSCCEECSSCCCCCTT--SCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHH
T ss_pred             cCCCCCCC--chhhHHHHHhcCC-----CCCeEEEeeeEEECCC--CCccCcHHHHHHHHhhccCccccccCCCCCchHH
Confidence            45566666  7888887777665     56799999994   33  234566999999999 887655678999899999


Q ss_pred             HHHHHHHHHhhhCCCCCCCC--cEEEecChHHHHHHHHH--HhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCC
Q 019298           82 TRRAIAEYLSRDLPYKLTPN--DVFVTSGCTQAIDVAMA--LLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK  157 (343)
Q Consensus        82 lr~~ia~~~~~~~~~~~~~~--~i~~~~g~~~al~~~~~--~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~  157 (343)
                      +|+++++++.+..+..++++  +|++|+|+++++..+++  .++++||+|+++.|+|..+...++..|.+++.+++..++
T Consensus        75 lr~~la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~  154 (397)
T 3fsl_A           75 YRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEA  154 (397)
T ss_dssp             HHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETT
T ss_pred             HHHHHHHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeecc
Confidence            99999999976544444788  99999999999999954  457899999999999999999999999999999885556


Q ss_pred             CCCCCHHHHHhhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC-CCCccccc-C
Q 019298          158 GWEVDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVPMGVF-G  232 (343)
Q Consensus       158 ~~~~d~~~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~-~~~~~~~~-~  232 (343)
                      ++.+|++++++.++   ++++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++. ...++..+ .
T Consensus       155 ~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  234 (397)
T 3fsl_A          155 TNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIAS  234 (397)
T ss_dssp             TTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHH
T ss_pred             CCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHh
Confidence            78899999999987   4677888899999999999999999999999999999999999999988732 22233333 3


Q ss_pred             CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh----h-hccccCcchHHHHHHHhccchhh------
Q 019298          233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK----Y-FDILGDPATFIQVCIMYGCLSTI------  301 (343)
Q Consensus       233 ~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~----~-~~~~~~~~~~~~~a~~~~~l~~~------  301 (343)
                      ..+++++++|+||.|+++|+|+||++++..     ++++++++..    . ...+..++.++|.++ ..++.+.      
T Consensus       235 ~~~~~i~~~S~SK~~~~~G~riG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~l~~~~  308 (397)
T 3fsl_A          235 AGLPALVSNSFSKIFSLYGERVGGLSVMCE-----DAEAAGRVLGQLKATVRRNYSSPPNFGAQVV-AAVLNDEALKASW  308 (397)
T ss_dssp             TTCCEEEEEECTTTTTCGGGCCEEEEEECS-----SHHHHHHHHHHHHHHHHTTTSSCCSHHHHHH-HHHHTSHHHHHHH
T ss_pred             cCCCEEEEecccccccCcCCCeeEEEEecC-----CHHHHHHHHHHHHHHHHhccCCCCHHHHHHH-HHHhcCHHHHHHH
Confidence            456899999999999999999999986421     2345544322    2 122445677888777 5555542      


Q ss_pred             HHHHH-HHHHHHHHHHHHHHhhcCCC---CceeeCCCCceEeeecC
Q 019298          302 MQIMI-HGNFLENFAGSCVPSYKLIP---ELINFKSTGSSLKYLDL  343 (343)
Q Consensus       302 ~~~l~-~~~~~~~~~~~~~~~L~~~~---g~~~~~~~~g~~~~~~l  343 (343)
                      .++++ .+++++++++.+.+.|++++   |+.+..|++|+|+|+++
T Consensus       309 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~  354 (397)
T 3fsl_A          309 LKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGL  354 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHHHCCSSEEECCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeecCCceEEEecCC
Confidence            23343 88899999999999998864   68877889999999874

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}

Probab=100.00  E-value=1.1e-41  Score=323.43  Aligned_cols=300  Identities=20%  Similarity=0.340  Sum_probs=238.6

Q ss_pred             ceeEeccCCCCCCCCCCC----------------------cHHHHHHHHHHHhcC---CCCCCCCCCCCHHHHHHHHHHH
Q 019298           36 KVISLAMGDPTVHSCFHT----------------------THVATEAVAEALLSE---KFNGYAPTAGLPLTRRAIAEYL   90 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~----------------------~~~~~~~~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~~   90 (343)
                      ++|++++|+|.... ..+                      +..+.+++++++...   ....|+++.|.+++|+++++++
T Consensus        64 ~~i~~nig~p~~~~-~~~~~~~r~~l~l~~~p~~~~~~~~P~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~  142 (498)
T 3ihj_A           64 EVIRANIGDAQAMG-QQPITFLRQVMALCTYPNLLDSPSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYI  142 (498)
T ss_dssp             SCBCCC-----------CCHHHHHHHHHHHCGGGGGCSSSCHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHH
T ss_pred             hhhhcCCcCccccc-CCcchHHHHHHHHhcCccccCcccCCHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHH
Confidence            88999999975321 111                      344445556666542   3568999999999999999999


Q ss_pred             hhhC-CCCCCCCcEEEecChHHHHHHHHHHhcCCCC----eEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHH
Q 019298           91 SRDL-PYKLTPNDVFVTSGCTQAIDVAMALLSRPGA----NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDD  165 (343)
Q Consensus        91 ~~~~-~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd----~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~  165 (343)
                      .+++ |.++++++|++|+|+++++..++++++++||    +|+++.|+|+.|...+...|.+++.++++++++|.+|+++
T Consensus       143 ~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~  222 (498)
T 3ihj_A          143 TRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNE  222 (498)
T ss_dssp             HHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHH
T ss_pred             HHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHH
Confidence            9888 4888999999999999999999999998875    9999999999999999999999999999888889999999


Q ss_pred             HHhhhcC-----CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC-CCCcccccC-------
Q 019298          166 IESLADQ-----NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVPMGVFG-------  232 (343)
Q Consensus       166 l~~~~~~-----~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~-~~~~~~~~~-------  232 (343)
                      |++++++     +++++++++||||||.+++.+++++|+++|++||+++|+||+|+.+.+++. ...++..+.       
T Consensus       223 le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~  302 (498)
T 3ihj_A          223 LRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEY  302 (498)
T ss_dssp             HHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHH
T ss_pred             HHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccc
Confidence            9999876     588999999999999999999999999999999999999999999999754 444444321       


Q ss_pred             -CCCCEEEEccCcccc-CCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchh-------hHH
Q 019298          233 -STVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLST-------IMQ  303 (343)
Q Consensus       233 -~~~~~i~~~S~sK~~-~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~-------~~~  303 (343)
                       ...++|+++||||+| |++|+|+||+++...     ++++++.+........+++.+.|.++ ..++..       ...
T Consensus       303 ~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~-----~~~l~~~l~~~~~~~~~~~~~~q~a~-~~~l~~~~~g~~~~~~  376 (498)
T 3ihj_A          303 SSNVELASFHSTSKGYMGECGYRGGYMEVINL-----HPEIKGQLVKLLSVRLCPPVSGQAAM-DIVVNPPVAGEESFEQ  376 (498)
T ss_dssp             HTTCCEEEEEESSSSTTCCSSSCCEEEEEESC-----CHHHHHHHHHHHHHSCCCCHHHHHHH-HHHTCCCCTTSTTHHH
T ss_pred             cCceeEEEEeccccccccCcccceEEEEEecC-----CHHHHHHHHHHHhccCCCCHHHHHHH-HHHhcCCccCcccHHH
Confidence             234689999999999 789999999985221     25788888877665678888999888 666642       123


Q ss_pred             HHH----HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298          304 IMI----HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD  342 (343)
Q Consensus       304 ~l~----~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~  342 (343)
                      +++    .+++++++++.+.+.|+++||+.+..|++|+|+|++
T Consensus       377 ~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~gg~~~~~~  419 (498)
T 3ihj_A          377 FSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPR  419 (498)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCcEecCCCeEEEEEEe
Confidence            432    778899999999999999999998899999999974

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}

Probab=100.00  E-value=5.2e-42  Score=314.70  Aligned_cols=291  Identities=20%  Similarity=0.309  Sum_probs=253.4

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      ++++|||+.|++    .+++++.+.+++.+++... ...|++ .+ .++|+++++++.+.+|..+++++|++|+|+++++
T Consensus        22 g~~~idl~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~   94 (377)
T 3fdb_A           22 GQGVLPLWVAES----DFSTCPAVLQAITDAVQRE-AFGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRGL   94 (377)
T ss_dssp             CTTSEECCSSCC----CSCCCHHHHHHHHHHHHTT-CCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHH
T ss_pred             CCCeeeecccCC----CCCCCHHHHHHHHHHHHcC-CCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHH
Confidence            788999999984    4778999999999998764 457988 77 8999999999998888888999999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~  193 (343)
                      ..++++++++||+|+++.|+|..+...++..|.+++.++++.+    +|++++++.++++++++++++|+||||.+++.+
T Consensus        95 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~  170 (377)
T 3fdb_A           95 YIAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATGG----INLHDVEKGFQAGARSILLCNPYNPLGMVFAPE  170 (377)
T ss_dssp             HHHHHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTS----CCHHHHHHHHHTTCCEEEEESSBTTTTBCCCHH
T ss_pred             HHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC----CCHHHHHHHhccCCCEEEEeCCCCCCCCCCCHH
Confidence            9999999999999999999999999999999999999988653    899999999988899999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCC-CCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGD-KPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~-~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  272 (343)
                      ++++|+++|++||+++|+||+|..+.+++ ....++..+...+++++++|+||.||++|+|+||+++++       ++++
T Consensus       171 ~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-------~~~~  243 (377)
T 3fdb_A          171 WLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSN-------PSDA  243 (377)
T ss_dssp             HHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCS-------HHHH
T ss_pred             HHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCC-------HHHH
Confidence            99999999999999999999999998877 544455444445678999999999999999999988753       4688


Q ss_pred             HHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcC-CCCceeeCCCCceEeeecC
Q 019298          273 ERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKL-IPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       273 ~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~-~~g~~~~~~~~g~~~~~~l  343 (343)
                      +.++.... ..++++++.+.++ .++|.+..++++ .+++++++++.+.+.|++ +||+.+..+++++++|+++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~  316 (377)
T 3fdb_A          244 EHWQQLSPVIKDGASTLGLIAA-EAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQATYLMWIDF  316 (377)
T ss_dssp             HHHHHSCHHHHCCCCHHHHHHH-HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCSBCSEEEEEC
T ss_pred             HHHHHHHHhhcCCCCHHHHHHH-HHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCeeEEEEEEC
Confidence            88877643 2467888888887 666665455555 889999999999999988 8899988999999999864

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*

Probab=100.00  E-value=1.6e-42  Score=323.48  Aligned_cols=317  Identities=21%  Similarity=0.245  Sum_probs=251.6

Q ss_pred             cccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHH---------HHHHhcCCCCC
Q 019298            2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAV---------AEALLSEKFNG   72 (343)
Q Consensus         2 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~   72 (343)
                      .+|+|....+++  +++.+.....+.      ++++|+|+.|.|+... ++ ...+..++         .....  ...+
T Consensus         6 ~~s~~~~~~~~~--~~~~~~~~~~~~------~~~~i~l~~G~p~~~~-~p-~~~~~~~~~~~~~~~~~~~~~~--~~~~   73 (425)
T 2r2n_A            6 FITAASAARNPS--PIRTMTDILSRG------PKSMISLAGGLPNPNM-FP-FKTAVITVENGKTIQFGEEMMK--RALQ   73 (425)
T ss_dssp             GSCHHHHTCCCC--SGGGHHHHHHHS------CTTCEECCCCCCCGGG-CS-EEEEEEEETTSCCEEECHHHHH--HHTS
T ss_pred             HHHHHHhcCCCc--hHHHHHHHhhcC------CCCeEEcCCcCCCchh-CC-HHHHHHHHhhcccccccccchh--hhcC
Confidence            378888888888  677766654321      3568999999987321 22 11110000         01111  1237


Q ss_pred             CCCCCCCHHHHHHHHHHHhhhCCCCCC-------CCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcC
Q 019298           73 YAPTAGLPLTRRAIAEYLSRDLPYKLT-------PNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRH  145 (343)
Q Consensus        73 Y~~~~g~~~lr~~ia~~~~~~~~~~~~-------~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g  145 (343)
                      |++..|.+++|+++++++.+.+|...+       +++|++|+|+++++..++++++++||+|++++|+|..+...++..|
T Consensus        74 Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g  153 (425)
T 2r2n_A           74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLG  153 (425)
T ss_dssp             CCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHGGGT
T ss_pred             CCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcC
Confidence            999999999999999999887887664       3799999999999999999999999999999999999999999999


Q ss_pred             ceeEEeecCCCCCCCCCHHHHHhhhc------------CCceEEEE-eCCCCCcccccCHHHHHHHHHHHhhcCcEEEEc
Q 019298          146 IEVRHFDLLPDKGWEVDLDDIESLAD------------QNTVALVI-INPGNPCGNVYSYQHLQKLAETANKLKTLVIAD  212 (343)
Q Consensus       146 ~~~~~~~~~~~~~~~~d~~~l~~~~~------------~~~~~i~~-~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D  212 (343)
                      .+++.++++.   .++|+++|++.++            .+++++++ ++||||||.+++.+++++|+++|++||+++|+|
T Consensus       154 ~~~~~v~~~~---~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~D  230 (425)
T 2r2n_A          154 CNIINVASDE---SGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIED  230 (425)
T ss_dssp             CEEEEECEET---TEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred             CEEEEeCcCC---CCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence            9999998753   2589999999886            35677765 688999999999999999999999999999999


Q ss_pred             cCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHH
Q 019298          213 EVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQV  291 (343)
Q Consensus       213 ~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~  291 (343)
                      |+|.++.+++....++..++..+++++++||||+|+ +|+|+||++++        ++++++++.... ..++++++.|.
T Consensus       231 e~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~--------~~l~~~l~~~~~~~~~~~~~~~q~  301 (425)
T 2r2n_A          231 DPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGP--------KPLIERVILHIQVSTLHPSTFNQL  301 (425)
T ss_dssp             CTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEE--------HHHHHHHHHHHHTTTCSSCHHHHH
T ss_pred             CCcccccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecC--------HHHHHHHHHHHHHhcCCCCHHHHH
Confidence            999999887765556666666678999999999998 99999999996        368888877653 35678899998


Q ss_pred             HHHhccchhh-----HHHHH-HHHHHHHHHHHHHHhhcC-CCCce-eeCCCCceEeeecC
Q 019298          292 CIMYGCLSTI-----MQIMI-HGNFLENFAGSCVPSYKL-IPELI-NFKSTGSSLKYLDL  343 (343)
Q Consensus       292 a~~~~~l~~~-----~~~l~-~~~~~~~~~~~~~~~L~~-~~g~~-~~~~~~g~~~~~~l  343 (343)
                      ++ ..+|+..     .++++ .+++++++++.+.+.|++ +||+. +..|++|+|+|+++
T Consensus       302 a~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~  360 (425)
T 2r2n_A          302 MI-SQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKV  360 (425)
T ss_dssp             HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEE
T ss_pred             HH-HHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEe
Confidence            88 6666641     23443 788899999999999987 67874 66899999999864

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}

Probab=100.00  E-value=7.4e-41  Score=306.49  Aligned_cols=308  Identities=19%  Similarity=0.326  Sum_probs=259.1

Q ss_pred             ccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHH
Q 019298            3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT   82 (343)
Q Consensus         3 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~l   82 (343)
                      +|+|....+++  +++.+.....+...   .+++.|+|+.|.++    ++.++.+.+++.+++... ...|++..|..++
T Consensus         2 ~~~~~~~~~~~--~~~~~~~~~~~~~~---~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~~~~~l   71 (370)
T 2z61_A            2 LSKRLLNFESF--EVMDILALAQKLES---EGKKVIHLEIGEPD----FNTPKPIVDEGIKSLKEG-KTHYTDSRGILEL   71 (370)
T ss_dssp             CCHHHHHCCCC--TTHHHHHHHHHHHH---TTCCCEECCCCSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHH
T ss_pred             hhhhhhhcccc--HHHHHHHHHHHHHh---cCCCEEEccCCCCC----CCCCHHHHHHHHHHHHcC-ccCCCCCCCCHHH
Confidence            57778888877  67777766654432   26788999999954    556899999999988754 4579888899999


Q ss_pred             HHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCC
Q 019298           83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD  162 (343)
Q Consensus        83 r~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d  162 (343)
                      |+++++++.+.+|..+++++|++|+|+++++..++++++++||+|++++|+|..+...++..|.+++.++        +|
T Consensus        72 ~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~--------~d  143 (370)
T 2z61_A           72 REKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD--------FT  143 (370)
T ss_dssp             HHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEEC--------SS
T ss_pred             HHHHHHHHHHHhCCCCChhhEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeC--------CC
Confidence            9999999998888888999999999999999999999999999999999999999999999999988875        68


Q ss_pred             HHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC-CCCCEEEEc
Q 019298          163 LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLG  241 (343)
Q Consensus       163 ~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~~~  241 (343)
                      +++|++.++++++++++++|+||||.+++.+    |+++|++||+++|+||+|..+.+++. +.++..+. ..+++++++
T Consensus       144 ~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~i~~~  218 (370)
T 2z61_A          144 VESLEEALSDKTKAIIINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEGK-CYSAIEFDENLEKTILIN  218 (370)
T ss_dssp             HHHHHHHCCSSEEEEEEESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSSC-CCCGGGTCTTCSSEEEEE
T ss_pred             HHHHHHhcccCceEEEEcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCCC-CcCHHHccCCCCcEEEEe
Confidence            9999999988889999999999999999987    88999999999999999999887653 23344442 346799999


Q ss_pred             cCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHH
Q 019298          242 SLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSC  318 (343)
Q Consensus       242 S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~  318 (343)
                      |+||.|+++|+|+||++++        ++++++++.... ..++++++.|.++ .++|+. ..++++ .+++++++++.+
T Consensus       219 s~sK~~~~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~~l  289 (370)
T 2z61_A          219 GFSKLYAMTGWRIGYVISN--------DEIIEAILKLQQNLFISAPTISQYAA-LKAFEKETEREINSMIKEFDRRRRLV  289 (370)
T ss_dssp             ESTTTTTCGGGCCEEEECC--------HHHHHHHHHHHHHHTSSSCHHHHHHH-GGGGSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cChhccCCccceEEEEEEC--------HHHHHHHHHHHhhcccCCCHHHHHHH-HHHHhccCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999985        368888877653 2457888889888 777775 455555 888999999999


Q ss_pred             HHhhcCCCCceeeCCCCceEeeecC
Q 019298          319 VPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       319 ~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      .+.|+++ |+.+..+++|+|+|+++
T Consensus       290 ~~~L~~~-g~~~~~~~~~~~~~~~~  313 (370)
T 2z61_A          290 LKYVKDF-GWEVNNPIGAYYVFPNI  313 (370)
T ss_dssp             HHHHHHT-TCBCCCCCBTTEECCBC
T ss_pred             HHHHHHc-CCeecCCCcceEEEEec
Confidence            9999988 88877889999999864

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*

Probab=100.00  E-value=3.8e-41  Score=314.41  Aligned_cols=326  Identities=18%  Similarity=0.282  Sum_probs=253.3

Q ss_pred             ccCccccCcCc-cccHHHHH-HHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc----------CCC
Q 019298            3 ISNGGIDNTGS-IITIKGML-SLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS----------EKF   70 (343)
Q Consensus         3 ~s~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~----------~~~   70 (343)
                      +|+|+...... ..++..-+ .......+...++.+.|+|+.+.    +.++ ++.+.++++++...          ...
T Consensus         2 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~----~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~   76 (428)
T 1iay_A            2 LSKLATNEEHGENSPYFDGWKAYDSDPFHPLKNPNGVIQMGLAE----NQLC-LDLIEDWIKRNPKGSICSEGIKSFKAI   76 (428)
T ss_dssp             CCTTGGGC-----CCTTHHHHHHHHSBCCSSSSTTSBEECSSCC----CCSS-HHHHHHHHHHCTTSSTTC----CHHHH
T ss_pred             cccccccccCcccccccchhhhhccCCCCcccCCCceeeecccc----chhh-HHHHHHHHHhccccccccccccccHhh
Confidence            68888665532 22333333 33333344334456789999887    2243 45788887754210          123


Q ss_pred             CCCCCCCCCHHHHHHHHHHHhhhCCCC--CCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH-HhcCce
Q 019298           71 NGYAPTAGLPLTRRAIAEYLSRDLPYK--LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA-AFRHIE  147 (343)
Q Consensus        71 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~--~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~-~~~g~~  147 (343)
                      ..|+++.|..++|+++++++++.+|..  +++++|++++|+++++..++++++++||+|++++|+|..+...+ ...|.+
T Consensus        77 ~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~  156 (428)
T 1iay_A           77 ANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQ  156 (428)
T ss_dssp             HHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCE
T ss_pred             cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCE
Confidence            579888889999999999999877765  77899999999999999999999999999999999999987754 367999


Q ss_pred             eEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccC
Q 019298          148 VRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG  221 (343)
Q Consensus       148 ~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~  221 (343)
                      ++.++++.++++.+|++++++++++      +++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.++
T Consensus       157 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~  236 (428)
T 1iay_A          157 LIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFD  236 (428)
T ss_dssp             EEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCS
T ss_pred             EEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccC
Confidence            9999886656778999999998863      6788999999999999999999999999999999999999999998876


Q ss_pred             CCCCCcccccCC--------CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHH
Q 019298          222 DKPFVPMGVFGS--------TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCI  293 (343)
Q Consensus       222 ~~~~~~~~~~~~--------~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~  293 (343)
                      +....++..+..        .++++++.|+||.||++|+|+||+++++       +++++.++.... .+.+++++|.++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~a~  308 (428)
T 1iay_A          237 TPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFN-------DDVVNCARKMSS-FGLVSTQTQYFL  308 (428)
T ss_dssp             SSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESC-------HHHHHHHHHHHT-TSCCCHHHHHHH
T ss_pred             CCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCC-------HHHHHHHHHHHh-cccCCHHHHHHH
Confidence            654434333322        4689999999999999999999999853       468887776554 356788888888


Q ss_pred             HhccchhhH---HHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          294 MYGCLSTIM---QIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       294 ~~~~l~~~~---~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                       ..+|.+..   ++++ .+++++++++.+.+.|+++ |+.+..+++|+|+|+++
T Consensus       309 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~  360 (428)
T 1iay_A          309 -AAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GIKCLKNNAGLFCWMDL  360 (428)
T ss_dssp             -HHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBCCCSSSSEEEEEC
T ss_pred             -HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCCCeeEEEEEec
Confidence             77777532   2444 8888999999999999988 88876777999999874

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}

Probab=100.00  E-value=1.8e-41  Score=318.30  Aligned_cols=329  Identities=16%  Similarity=0.160  Sum_probs=256.2

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCC-CCCCCCCCcHHHHHHHHHHH--hcCCCCCCCCCC
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEAL--LSEKFNGYAPTA   77 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~Y~~~~   77 (343)
                      |.++++....+++  ++..+...+.++.     .+.+|||++|.+ +.....+..+++.+++.+..  ......+|.+..
T Consensus        22 ~~~~~~~~~~~~~--~i~~~~~~~~~~~-----~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~   94 (448)
T 3meb_A           22 MSVFSGFPASPPD--AILNLTVLYNADT-----NPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVA   94 (448)
T ss_dssp             CCTTTTCCCCCCC--TTHHHHHHHHHCC-----CTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTT
T ss_pred             hhHHhcCCCCCCC--hHHHHHHHHHhCC-----CCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCc
Confidence            4556667777776  7888888777765     556899999998 43333457788888877765  223456899989


Q ss_pred             CCHHHHHHHHHHHhhhCCCC---CCCCcEEE--ecChHHHHHH--HHHHhcCCCCeEEEeCCCCcchHHHHH----hcCc
Q 019298           78 GLPLTRRAIAEYLSRDLPYK---LTPNDVFV--TSGCTQAIDV--AMALLSRPGANILLPRPGFPIYELSAA----FRHI  146 (343)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~---~~~~~i~~--~~g~~~al~~--~~~~l~~~gd~vl~~~p~~~~~~~~~~----~~g~  146 (343)
                      |.+++|+++++++.   |..   +++++|++  |+|+++++..  .+..++.+||+|++++|+|..+...++    ..|.
T Consensus        95 G~~~lr~~ia~~l~---g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~  171 (448)
T 3meb_A           95 GFPLFLEAAQFLMF---GKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKV  171 (448)
T ss_dssp             CCHHHHHHHHHHHH---CTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTS
T ss_pred             chHHHHHHHHHHhc---CCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCC
Confidence            99999999999993   322   23689999  9999999988  445667899999999999999999999    9999


Q ss_pred             eeEEeecCCCC-CCCCCHHHHHhhhcC---CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCC
Q 019298          147 EVRHFDLLPDK-GWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD  222 (343)
Q Consensus       147 ~~~~~~~~~~~-~~~~d~~~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~  222 (343)
                      +++.+++..++ ++.+|++++++.+++   ++.++++++||||||.+++.+++++|+++|+++|+++|+||+|+++.+++
T Consensus       172 ~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~  251 (448)
T 3meb_A          172 PYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGS  251 (448)
T ss_dssp             CCEEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSC
T ss_pred             eEEEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCC
Confidence            99999885444 688999999998874   56777889999999999999999999999999999999999999998775


Q ss_pred             C--CCCccccc-CCCCCEEEEccCccccCCCCCcEEEE--EE--------eCCCCCCCchHHHHHHhhhh-ccccCcchH
Q 019298          223 K--PFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWF--VT--------TDPCGMFRKPKVVERMKKYF-DILGDPATF  288 (343)
Q Consensus       223 ~--~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~i--~~--------~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~  288 (343)
                      .  ....+..+ ....++++++||||+|+++|+|+||+  ++        +++..   -.++++.++... ..+.+++.+
T Consensus       252 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~---~~~l~~~l~~~~~~~~~~~~~~  328 (448)
T 3meb_A          252 FEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKAL---SAAMVSGMTLQIRKTWSMSAIH  328 (448)
T ss_dssp             HHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHH---HHHHHHHHHHHHHTTTSSCCHH
T ss_pred             cccCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHH---HHHHHHHHHHHHhcccCCccHH
Confidence            2  12222222 23468899999999999999999998  65        42100   004666666543 335577888


Q ss_pred             HHHHHHhccchhhH---HH---HH-HHHHHHHHHHHHHHhhcCC--CC------ceeeCCCCceEeeecC
Q 019298          289 IQVCIMYGCLSTIM---QI---MI-HGNFLENFAGSCVPSYKLI--PE------LINFKSTGSSLKYLDL  343 (343)
Q Consensus       289 ~~~a~~~~~l~~~~---~~---l~-~~~~~~~~~~~~~~~L~~~--~g------~~~~~~~~g~~~~~~l  343 (343)
                      .|.++ ..+|.+..   +|   ++ .+++++++++.+.+.|+++  ++      +.+..|++|+|+|+++
T Consensus       329 ~~~a~-~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  397 (448)
T 3meb_A          329 GAYIV-QVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGL  397 (448)
T ss_dssp             HHHHH-HHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCC
T ss_pred             HHHHH-HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecCC
Confidence            88888 66666532   33   33 8889999999999999876  66      7766899999999864

>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}

Probab=100.00  E-value=9.4e-42  Score=315.26  Aligned_cols=332  Identities=13%  Similarity=0.037  Sum_probs=244.6

Q ss_pred             CcccCccccCcCc-cccHHHHHHHHHhhccccccccceeEeccCCCCCC-CCCCCcHHHHHHHHHHHhcCCCCCCCCCCC
Q 019298            1 MEISNGGIDNTGS-IITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVH-SCFHTTHVATEAVAEALLSEKFNGYAPTAG   78 (343)
Q Consensus         1 ~~~s~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g   78 (343)
                      |+.++|.++++.. ..+|..+...++++.      .++|||++|..... ...+..+.+++|.+..++.+..++|.|..|
T Consensus        15 m~~~~~~~~v~~~p~d~i~~l~~~~~~d~------~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G   88 (420)
T 4h51_A           15 MTTAERWQKIQAQAPDVIFDLAKRAAAAK------GPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISG   88 (420)
T ss_dssp             CCHHHHHHTCCCCCCCHHHHHHHHHHHCC------SSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTC
T ss_pred             hhhhHHHhCCCCCCCChHHHHHHHHhcCC------CCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCC
Confidence            4555665554433 237888888777664      34899999964322 234567899999888887776778999999


Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCc--EEEecChHHHHHHHHHHh----cCCCCeEEEeCCCCcchHHHHHhcCce-eEEe
Q 019298           79 LPLTRRAIAEYLSRDLPYKLTPND--VFVTSGCTQAIDVAMALL----SRPGANILLPRPGFPIYELSAAFRHIE-VRHF  151 (343)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~--i~~~~g~~~al~~~~~~l----~~~gd~vl~~~p~~~~~~~~~~~~g~~-~~~~  151 (343)
                      .++||+++++++.+   .....+.  .+.|.|++.++..++..+    ..|||+|++++|+|++|...++..|.+ +..+
T Consensus        89 ~p~lr~aia~~~~g---~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~  165 (420)
T 4h51_A           89 YQPFIDEAVKIIYG---NTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTY  165 (420)
T ss_dssp             CHHHHHHHHHHHHC------CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEE
T ss_pred             hHHHHHHHHHHhcC---CCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEee
Confidence            99999999999843   2333343  355889998888777665    469999999999999999999999987 4455


Q ss_pred             ecCCCCCCCCCHHHHHhhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCc-
Q 019298          152 DLLPDKGWEVDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-  227 (343)
Q Consensus       152 ~~~~~~~~~~d~~~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~-  227 (343)
                      +....+++.+|.+.+.+.+.   ++++++++++||||||.+++.++|++|+++|+++++++|+|++|.+|.+++....+ 
T Consensus       166 ~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~  245 (420)
T 4h51_A          166 AYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAY  245 (420)
T ss_dssp             ECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTH
T ss_pred             ccccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchH
Confidence            55555667789888887664   45667778889999999999999999999999999999999999999987643222 


Q ss_pred             -cc-ccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhh---
Q 019298          228 -MG-VFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTI---  301 (343)
Q Consensus       228 -~~-~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~---  301 (343)
                       .. ..+...+++++.||||+|+++|+|+||++++...... -..+..++... +...++++...|.++ ..+|.++   
T Consensus       246 ~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~-~~~~~~~l~~~~r~~~s~~p~~~a~~~-~~~l~d~~l~  323 (420)
T 4h51_A          246 AARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTK-RADVKSVMDSLIREEYTCPPAHGARLA-HLILSNNELR  323 (420)
T ss_dssp             HHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHH-HHHHHHHHHHHHHTTTSSCCHHHHHHH-HHHHHSHHHH
T ss_pred             HHHhHHhhCceEEEEeccccccccccCceEEEEecccCHHH-HHHHHHHHHHhhhcccCcchHHHHHHH-HHHhcCHHHH
Confidence             11 1234457899999999999999999999886532000 00122223323 234567788888887 6666653   


Q ss_pred             HHHHH----HHHHHHHHHHHHHHhhcCC--CC-ceeeCCCCceEeeecC
Q 019298          302 MQIMI----HGNFLENFAGSCVPSYKLI--PE-LINFKSTGSSLKYLDL  343 (343)
Q Consensus       302 ~~~l~----~~~~~~~~~~~~~~~L~~~--~g-~~~~~~~~g~~~~~~l  343 (343)
                      .+|.+    ++++++++|+.+.+.|+++  ++ |.+..+++|+|.|+.|
T Consensus       324 ~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gl  372 (420)
T 4h51_A          324 KEWEAELSAMAERIRTMRRTVYDELLRLQTPGSWEHVINQIGMFSFLGL  372 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHCCSSEEECCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCeecCCCceEEecCc
Confidence            23333    8889999999999999875  22 5555789999999864

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*

Probab=100.00  E-value=3.6e-41  Score=311.57  Aligned_cols=294  Identities=17%  Similarity=0.279  Sum_probs=248.4

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~  114 (343)
                      .++++|+.|++    .+++++.+.+++.+++... ...|++.  ..++|+++++++.+.+|.++++++|++|+|+++++.
T Consensus        31 ~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~  103 (399)
T 1c7n_A           31 NEVVPLSVADM----EFKNPPELIEGLKKYLDET-VLGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVF  103 (399)
T ss_dssp             TTCCCCCSSSC----SSCCCHHHHHHHHHHHHHC-CCSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHH
T ss_pred             CCceeeeecCC----CCCCCHHHHHHHHHHHhcC-CCCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHH
Confidence            57899999984    3678899999999988643 4578764  899999999999887787788899999999999999


Q ss_pred             HHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCC-CCCCCHHHHHhhhc-CCceEEEEeCCCCCcccccCH
Q 019298          115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK-GWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       115 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~~~-~~~~~i~~~~p~nptG~~~~~  192 (343)
                      .++++++++||+|+++.|+|.++...+...|.+++.+++++++ ++.+|+++|+++++ ++++++++++|+||||.+++.
T Consensus       104 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~  183 (399)
T 1c7n_A          104 NAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKK  183 (399)
T ss_dssp             HHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCH
T ss_pred             HHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCH
Confidence            9999999999999999999999999999999999988875332 46699999999997 678899999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC--CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchH
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK  270 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~  270 (343)
                      +++++|+++|++||+++|+||+|..+.+++....++..+..  .+++++++|+||.|+++|+|+||+++++       ++
T Consensus       184 ~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-------~~  256 (399)
T 1c7n_A          184 DELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKN-------PD  256 (399)
T ss_dssp             HHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCC-------HH
T ss_pred             HHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECC-------HH
Confidence            99999999999999999999999999887655445554443  4678999999999999999999999853       35


Q ss_pred             HHHHHhhhhccc--cCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcC-CCCceeeCCCCceEeeecC
Q 019298          271 VVERMKKYFDIL--GDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKL-IPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       271 ~~~~l~~~~~~~--~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~-~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++++++......  .+++++.+.++ .++|....++++ .+++++++++.+.+.|++ +||+.+..+++++++|+++
T Consensus       257 ~~~~l~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~  332 (399)
T 1c7n_A          257 IRERFTKSRDATSGMPFTTLGYKAC-EICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDF  332 (399)
T ss_dssp             HHHHHHHHHHHTTCCCCCHHHHHHH-HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEEC
T ss_pred             HHHHHHHHHhhcccCCCCHHHHHHH-HHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecCCceEEEEEEc
Confidence            888887664322  35788888877 666654345555 888899999999999998 8899887889999999864

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0

Probab=100.00  E-value=7.7e-41  Score=308.29  Aligned_cols=295  Identities=20%  Similarity=0.273  Sum_probs=253.4

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      ++++|||+.|++    .+++++.+.+++.+++... ...|++.  ..++++++++++.+.+|.++++++|++|+|+++++
T Consensus        26 g~~~i~~~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~   98 (391)
T 3dzz_A           26 KEKELPMWIAEM----DFKIAPEIMASMEEKLKVA-AFGYESV--PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAI   98 (391)
T ss_dssp             CTTCEECCSSCC----SSCCCHHHHHHHHHHHTTC-CCCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHH
T ss_pred             CCCceeccccCC----CCCCCHHHHHHHHHHHhcC-cCCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHH
Confidence            668999999984    4788999999999998764 3467764  68999999999999888888999999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecC-CCCCCCCCHHHHHhhhc-CCceEEEEeCCCCCcccccC
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL-PDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYS  191 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~~~-~~~~~i~~~~p~nptG~~~~  191 (343)
                      ..++++++++||+|+++.|+|..+...++..|.+++.++++ .++.+.+|+++|+++++ ++++++++++|+||||.+++
T Consensus        99 ~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~  178 (391)
T 3dzz_A           99 SAMVRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWS  178 (391)
T ss_dssp             HHHHHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCC
T ss_pred             HHHHHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccC
Confidence            99999999999999999999999999999999999999885 34556799999999997 68899999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC--CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCch
Q 019298          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP  269 (343)
Q Consensus       192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~  269 (343)
                      .+++++|+++|++||+++|+||+|..+.+.+....++..+..  .++++++.|+||.++++|+|+||+++++       +
T Consensus       179 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~-------~  251 (391)
T 3dzz_A          179 EEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPN-------P  251 (391)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCS-------H
T ss_pred             HHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECC-------H
Confidence            999999999999999999999999999888765555555543  3579999999999999999999999863       4


Q ss_pred             HHHHHHhhhhc--cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcC-CCCceeeCCCCceEeeecC
Q 019298          270 KVVERMKKYFD--ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKL-IPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       270 ~~~~~l~~~~~--~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~-~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++++.++....  ..++++++.+.++ .+++....++++ .+++++++++.+.+.|++ +||+.+..+++++++|+++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~  328 (391)
T 3dzz_A          252 DLRARAEESFFLAGIGEPNLLAIPAA-IAAYEEGHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSNASYLAWVDI  328 (391)
T ss_dssp             HHHHHHHHHHHHHTCSSCCTTHHHHH-HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCCBSSEEEEEC
T ss_pred             HHHHHHHHHHHhhccCCCCHHHHHHH-HHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEeccCceEEEEEeh
Confidence            68888876642  2456777888777 556655455555 888899999999999998 8999988999999999864

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*

Probab=100.00  E-value=2e-41  Score=314.73  Aligned_cols=329  Identities=13%  Similarity=0.113  Sum_probs=259.0

Q ss_pred             cccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCC-CCCCCCCCcHHHHHHHHHHHhc-CCCCCCCCCCCC
Q 019298            2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEALLS-EKFNGYAPTAGL   79 (343)
Q Consensus         2 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~g~   79 (343)
                      .+++|..+.+++  +++.+.....+..     +.++|||+.|.+ +......+++.+.+++.+++.+ ...+.|.+..|.
T Consensus         4 ~~~~~~~~~~~~--~~~~~~~~~~~~~-----~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~   76 (412)
T 1ajs_A            4 SVFAEVPQAQPV--LVFKLIADFREDP-----DPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGL   76 (412)
T ss_dssp             CTTTTCCCCCCC--HHHHHHHHHHTCC-----CTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCC
T ss_pred             chhhhCcccCCc--hHHHHHHHHhhcC-----CCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCC
Confidence            356677788877  7888888776542     678899999996 3222245779999999998733 245689888899


Q ss_pred             HHHHHHHHHHHhhhCCCCCCCCcEEE--ecChHHHHHHHHH--HhcCCC-----CeEEEeCCCCcchHHHHHhcCce-eE
Q 019298           80 PLTRRAIAEYLSRDLPYKLTPNDVFV--TSGCTQAIDVAMA--LLSRPG-----ANILLPRPGFPIYELSAAFRHIE-VR  149 (343)
Q Consensus        80 ~~lr~~ia~~~~~~~~~~~~~~~i~~--~~g~~~al~~~~~--~l~~~g-----d~vl~~~p~~~~~~~~~~~~g~~-~~  149 (343)
                      +++|+++++++.+.++..+++++|++  |+|+++++..+++  .++++|     |+|+++.|+|..+...++..|.+ ++
T Consensus        77 ~~lr~~la~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~  156 (412)
T 1ajs_A           77 AEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIR  156 (412)
T ss_dssp             HHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEE
T ss_pred             HHHHHHHHHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeE
Confidence            99999999999665555567899999  9999999999965  345789     99999999999999999999999 99


Q ss_pred             EeecCCCCCCCCCHHHHHhhhcC---CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCC--CC
Q 019298          150 HFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD--KP  224 (343)
Q Consensus       150 ~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~--~~  224 (343)
                      .+++.+++++.+|++++++.+++   +++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++  ..
T Consensus       157 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~  236 (412)
T 1ajs_A          157 SYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKD  236 (412)
T ss_dssp             EEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHH
T ss_pred             EEeeecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCccccc
Confidence            99886556778999999998864   56677789999999999999999999999999999999999999988765  12


Q ss_pred             CCcccccC-CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchH----HHHHHhhhh-ccccCcchHHHHHHHhccc
Q 019298          225 FVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK----VVERMKKYF-DILGDPATFIQVCIMYGCL  298 (343)
Q Consensus       225 ~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~----~~~~l~~~~-~~~~~~~~~~~~a~~~~~l  298 (343)
                      ..++..+. ..++++++.|+||.|+++|+|+||+++...     +++    +++.++... ..+..++++.|.++ ..+|
T Consensus       237 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l  310 (412)
T 1ajs_A          237 AWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAK-----EPDSILRVLSQMQKIVRVTWSNPPAQGARIV-ARTL  310 (412)
T ss_dssp             THHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECS-----SHHHHHHHHHHHHHHHHTTTSSCCSHHHHHH-HHHH
T ss_pred             chHHHHHhccCCcEEEEEecccccCCCCcceEEEEEecC-----CHHHHHHHHHHHHHHHhcccCCCChHHHHHH-HHHH
Confidence            22333232 345789999999999999999999998210     124    555555533 32344688888888 6777


Q ss_pred             hhhH------HHHH-HHHHHHHHHHHHHHhhcCCC---CceeeCCCCceEeeecC
Q 019298          299 STIM------QIMI-HGNFLENFAGSCVPSYKLIP---ELINFKSTGSSLKYLDL  343 (343)
Q Consensus       299 ~~~~------~~l~-~~~~~~~~~~~~~~~L~~~~---g~~~~~~~~g~~~~~~l  343 (343)
                      ++..      ++++ .+++++++++.+.+.|++++   ++.+..|++|+|+|+++
T Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~  365 (412)
T 1ajs_A          311 SDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGL  365 (412)
T ss_dssp             HSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCC
T ss_pred             cCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeCC
Confidence            6542      2444 88899999999999999874   47776889999999864

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1

Probab=100.00  E-value=9.4e-42  Score=316.93  Aligned_cols=331  Identities=13%  Similarity=0.113  Sum_probs=257.6

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCC-CCCCCCCCcHHHHHHHHH-HHhcCCCCCCCCCCC
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAE-ALLSEKFNGYAPTAG   78 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~Y~~~~g   78 (343)
                      |.++++....+++  ++..+...+.+..     +.++|||+.|.+ +.....++++.+.+++.+ .+.....++|++..|
T Consensus         2 ~~~~~~~~~~~~~--~~~~~~~~~~~~~-----~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g   74 (412)
T 1yaa_A            2 ATLFNNIELLPPD--ALFGIKQRYGQDQ-----RATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITG   74 (412)
T ss_dssp             TTTTTTCCCCCCC--TTHHHHHHHHTCC-----CSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTC
T ss_pred             cchhccCcccCCC--cHHHHHHHHhcCC-----CCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCC
Confidence            4567888888877  7788877766553     577899999996 322234578999999999 876545568988889


Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEE--ecChHHHHHHHH--HHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecC
Q 019298           79 LPLTRRAIAEYLSRDLPYKLTPNDVFV--TSGCTQAIDVAM--ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL  154 (343)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i~~--~~g~~~al~~~~--~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~  154 (343)
                      .+++|+++++++.+.+|..+++++|++  |+|+++++..++  ..+..+||+|++++|+|..+...++..|.+++.+++.
T Consensus        75 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~  154 (412)
T 1yaa_A           75 LPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYW  154 (412)
T ss_dssp             CHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECE
T ss_pred             cHHHHHHHHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEeee
Confidence            999999999999765665567899999  999999999884  3344699999999999999999999999999999873


Q ss_pred             CCCCCCCCHHHHHhhhcCC---ceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCC--CCCCccc
Q 019298          155 PDKGWEVDLDDIESLADQN---TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD--KPFVPMG  229 (343)
Q Consensus       155 ~~~~~~~d~~~l~~~~~~~---~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~--~~~~~~~  229 (343)
                      .++++.+|++++++++++.   +.++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++  ....++.
T Consensus       155 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  234 (412)
T 1yaa_A          155 ANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVR  234 (412)
T ss_dssp             ETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHH
T ss_pred             cCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHH
Confidence            2346789999999988653   3444559999999999999999999999999999999999999988765  1222222


Q ss_pred             ccC-CCC---CEEEEccCccccCCCCCcEEEEE--E-eCCCCCCCchH----HHHHHhhhh-ccccCcchHHHHHHHhcc
Q 019298          230 VFG-STV---PILTLGSLSKRWIVPGWRLGWFV--T-TDPCGMFRKPK----VVERMKKYF-DILGDPATFIQVCIMYGC  297 (343)
Q Consensus       230 ~~~-~~~---~~i~~~S~sK~~~~~G~r~G~i~--~-~~~~~~~~~~~----~~~~l~~~~-~~~~~~~~~~~~a~~~~~  297 (343)
                      .+. ..+   ++++++|+||.|+++|+|+||++  + +.+    ++++    ++++++... ..+.+++.+.|.++ ..+
T Consensus       235 ~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~----~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~-~~~  309 (412)
T 1yaa_A          235 LGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQA----QNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIV-AKL  309 (412)
T ss_dssp             HHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCT----THHHHHHHHHHHHHHHHHTTTSSCCHHHHHHH-HHH
T ss_pred             HHHhcCCCCcceEEEeccCCCCCCcCCcceEEEEEecCCC----CCHHHHHHHHHHHHHHHhhccCCCChHHHHHH-HHH
Confidence            221 123   78999999999999999999998  5 100    0134    777777643 33456688888888 677


Q ss_pred             chhhH------HHHH-HHHHHHHHHHHHHHhhcCCC---CceeeCCCCceEeeecC
Q 019298          298 LSTIM------QIMI-HGNFLENFAGSCVPSYKLIP---ELINFKSTGSSLKYLDL  343 (343)
Q Consensus       298 l~~~~------~~l~-~~~~~~~~~~~~~~~L~~~~---g~~~~~~~~g~~~~~~l  343 (343)
                      |.+..      ++++ .+++++++++.+.+.|++++   ++.+..|++|+|+|+++
T Consensus       310 l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~  365 (412)
T 1yaa_A          310 LETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGL  365 (412)
T ss_dssp             HHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCC
T ss_pred             hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeeccCceEEEeeCC
Confidence            76542      3444 88899999999999998874   47777889999999763

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*

Probab=100.00  E-value=1e-40  Score=306.82  Aligned_cols=308  Identities=26%  Similarity=0.360  Sum_probs=252.3

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~   80 (343)
                      |.+|+|....+++  .+..+.....        ..+.|||+.|.++    +++++.+.+++.+++..  ...|++..+..
T Consensus         1 ~~~~~~~~~~~~~--~~~~~~~~~~--------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~~~~~~   64 (381)
T 1v2d_A            1 MRLHPRTEAAKES--IFPRMSGLAQ--------RLGAVNLGQGFPS----NPPPPFLLEAVRRALGR--QDQYAPPAGLP   64 (381)
T ss_dssp             CCCCGGGGGC-----CHHHHHHHHH--------HHTCEECCCCSCS----SCCCHHHHHHHHHHTTT--SCSCCCTTCCH
T ss_pred             CchhhhhhhcCcc--HHHHHHHHHh--------cCCeEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCCCCCCCH
Confidence            7789999988877  5555443222        2357999999854    56789999999998875  45799877999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecC--CCCC
Q 019298           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL--PDKG  158 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~--~~~~  158 (343)
                      ++|+++++++      ++++++|++|+|+++++..+++++.++||+|++++|+|..+...++..|.+++.++.+  + ++
T Consensus        65 ~l~~~la~~~------~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~-~~  137 (381)
T 1v2d_A           65 ALREALAEEF------AVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTP-EG  137 (381)
T ss_dssp             HHHHHHHHHH------TSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEET-TE
T ss_pred             HHHHHHHHhc------CCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCC-cc
Confidence            9999999998      5678899999999999999999999999999999999999999999999999999875  3 24


Q ss_pred             CCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEE
Q 019298          159 WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPIL  238 (343)
Q Consensus       159 ~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i  238 (343)
                      +.+|+++|++.++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|.++.+ +....++..+ ..++++
T Consensus       138 ~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~-~~~~~~  215 (381)
T 1v2d_A          138 FRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREF-APERTF  215 (381)
T ss_dssp             EECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHH-CTTTEE
T ss_pred             CCcCHHHHHHhcCcCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHh-cCCCEE
Confidence            67999999999988889999999999999999999999999999999999999999999887 4333333333 446789


Q ss_pred             EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhh--HHHHH-HHHHHHHH
Q 019298          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTI--MQIMI-HGNFLENF  314 (343)
Q Consensus       239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~--~~~l~-~~~~~~~~  314 (343)
                      +++|+||.|+++|+|+||++++.        ++++.++.... ..++++++.+.++ ..+|...  .++++ .+++++++
T Consensus       216 ~~~s~sK~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~  286 (381)
T 1v2d_A          216 TVGSAGKRLEATGYRVGWIVGPK--------EFMPRLAGMRQWTSFSAPTPLQAGV-AEALKLARREGFYEALREGYRRR  286 (381)
T ss_dssp             EEEEHHHHTTCGGGCCEEEECCT--------TTHHHHHHHHHHHTSSCCHHHHHHH-HHHHHHHHHTTHHHHHHHHHHHH
T ss_pred             EEeechhhcCCcccceEEEEeCH--------HHHHHHHHHHhhcccCCCcHHHHHH-HHHHhCcccHHHHHHHHHHHHHH
Confidence            99999999999999999999853        46666665532 2456778888777 5666643  34444 88889999


Q ss_pred             HHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          315 AGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       315 ~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++.+.+.|++. |+.+..+++|+|+|+++
T Consensus       287 ~~~l~~~L~~~-g~~~~~~~~~~~~~~~~  314 (381)
T 1v2d_A          287 RDLLAGGLRAM-GLRVYVPEGTYFLMAEL  314 (381)
T ss_dssp             HHHHHHHHHHT-TCCEECCSBSSEEEEEC
T ss_pred             HHHHHHHHHHC-CCEecCCCcceEEEEec
Confidence            99999999886 88887888999999864

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}

Probab=100.00  E-value=3.2e-41  Score=315.58  Aligned_cols=311  Identities=17%  Similarity=0.162  Sum_probs=258.3

Q ss_pred             cHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCC
Q 019298           16 TIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLP   95 (343)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~   95 (343)
                      +++.+......-.+  ..++++|+|+.|++.    +++++.+.+++.+++.......|++..|..++|+++++++++.+|
T Consensus        27 ~~~~~~~~~~~~~~--~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g  100 (437)
T 3g0t_A           27 SIRDLVALVTNLEK--ATGTKFCRMEMGVPG----LPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVN  100 (437)
T ss_dssp             CHHHHHHHHHHHHH--HHTCCCEECCCCSCC----SCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHH--hcCCCEEeccCcCCC----CCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhC
Confidence            56665554433211  126789999999954    678899999999998765446899988999999999999998888


Q ss_pred             CCCCCCcEEEecChHHHHHHHHHHhc--CCCC--eEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhh-
Q 019298           96 YKLTPNDVFVTSGCTQAIDVAMALLS--RPGA--NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA-  170 (343)
Q Consensus        96 ~~~~~~~i~~~~g~~~al~~~~~~l~--~~gd--~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~-  170 (343)
                      ..+++++|++|+|+++++..++++++  ++||  +|+++.|+|..+...++..|.+++.++++ ++++.+|+++|++++ 
T Consensus       101 ~~~~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~  179 (437)
T 3g0t_A          101 IDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLF-EYRGEKLREKLESYLQ  179 (437)
T ss_dssp             CCCCGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGG-GGCTTHHHHHHHHHHT
T ss_pred             CCCCcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeec-CCCCccCHHHHHHHHh
Confidence            88899999999999999999999998  9999  99999999999999999999999999986 456778999999999 


Q ss_pred             cCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCC----cc-cccCC-CCCEEEEccCc
Q 019298          171 DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV----PM-GVFGS-TVPILTLGSLS  244 (343)
Q Consensus       171 ~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~----~~-~~~~~-~~~~i~~~S~s  244 (343)
                      +++++++++++|+||||.+++.+++++|+++|++||+++|+|++|+.+.+++....    ++ ..+.. .+++++++|+|
T Consensus       180 ~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s  259 (437)
T 3g0t_A          180 TGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSS  259 (437)
T ss_dssp             TTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEEST
T ss_pred             cCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCc
Confidence            67889999999999999999999999999999999999999999999887632211    11 33333 56899999999


Q ss_pred             cccCCCCCcEEEEEEeCCCCCCCchHHHH-H-----------------Hhhhhc-cccCcchHHHHHHHhccchhhHH--
Q 019298          245 KRWIVPGWRLGWFVTTDPCGMFRKPKVVE-R-----------------MKKYFD-ILGDPATFIQVCIMYGCLSTIMQ--  303 (343)
Q Consensus       245 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~-~-----------------l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~--  303 (343)
                      |.|+++|+|+||++++        +++++ .                 ++.... ..++++++.+.++ ..+|.....  
T Consensus       260 K~~~~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~  330 (437)
T 3g0t_A          260 KAFSYAGQRIGVLMIS--------GKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGM-AAMLKACNDGE  330 (437)
T ss_dssp             TTTSCGGGCCEEEEEC--------HHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHH-HHHHHHHHTTS
T ss_pred             cCCCCccceeEEEEEC--------HHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHH-HHHHhCcHhHH
Confidence            9999999999999985        35776 6                 655543 2567888888888 677776444  


Q ss_pred             --HHHHHHHHHHHHHHHHHhhcCCCCceee------CC-CCceEeeecC
Q 019298          304 --IMIHGNFLENFAGSCVPSYKLIPELINF------KS-TGSSLKYLDL  343 (343)
Q Consensus       304 --~l~~~~~~~~~~~~~~~~L~~~~g~~~~------~~-~~g~~~~~~l  343 (343)
                        +.+.+++++++++.+.+.|+++ |+.+.      .| ++|+|+|+++
T Consensus       331 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~  378 (437)
T 3g0t_A          331 YNFRDSVIEYGRKARIMKKMFLDN-GFNIVYDKDGNEPLADGFYFTVGY  378 (437)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTT-TEEESSCEETTEECCSSSEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHc-CCEEeccccCCCCCceeEEEEEec
Confidence              3348999999999999999999 88876      35 8999999863

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}

Probab=100.00  E-value=6.8e-41  Score=314.59  Aligned_cols=297  Identities=18%  Similarity=0.269  Sum_probs=242.4

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc----CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS----EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g  108 (343)
                      ++.++|+|+.|++    .++.++.+.+++.+++..    .....|++..|.++||+++++++.  +|.++++++|++|+|
T Consensus        67 ~~~~~i~l~~g~~----~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~~~i~~t~G  140 (449)
T 3qgu_A           67 PDAKIISLGIGDT----TEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFY--GHAGRAADEIFISDG  140 (449)
T ss_dssp             TTCCCEECSSCCC----CCCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHH--TTTTCCGGGEEEESC
T ss_pred             CCCCEEEeeCCCC----CCCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHH--cCCCCCHHHEEEccC
Confidence            3678999999984    477899999999998874    345689888899999999999997  777888999999999


Q ss_pred             hHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCce----------eEEeecCCCCCCCCCHHHHHhhhcCCceEEE
Q 019298          109 CTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIE----------VRHFDLLPDKGWEVDLDDIESLADQNTVALV  178 (343)
Q Consensus       109 ~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~----------~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~  178 (343)
                      +++++..+ ..++++||+|++++|+|.++...++..|.+          ++.++++.++++..|++++     +++++++
T Consensus       141 ~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~  214 (449)
T 3qgu_A          141 SKCDIARI-QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----KRTDIIF  214 (449)
T ss_dssp             HHHHHHHH-HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----CCCSEEE
T ss_pred             HHHHHHHH-HHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHc-----CCCCEEE
Confidence            99999998 788899999999999999999999999988          8999887665666665442     4788999


Q ss_pred             EeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEE
Q 019298          179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWF  257 (343)
Q Consensus       179 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i  257 (343)
                      +++||||||.+++.+++++|+++|++||+++|+||+|..+.+++..+.++..+.. .+++++++||||+||++|+|+||+
T Consensus       215 l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~  294 (449)
T 3qgu_A          215 FCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWT  294 (449)
T ss_dssp             EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEE
T ss_pred             EeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEE
Confidence            9999999999999999999999999999999999999999988765555555543 457899999999999999999999


Q ss_pred             EEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCC
Q 019298          258 VTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSCVPSYKLIPELINFKST  334 (343)
Q Consensus       258 ~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~  334 (343)
                      +++++........+...+.... ..+.+++++.|.++ .++|.+ ..++++ .+++++++++.+.+.|+++ |+.+..++
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~  372 (449)
T 3qgu_A          295 VVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGG-LACLQPEGLKEMNAMIKFYKENAQILKTTFTEM-GFSVYGGD  372 (449)
T ss_dssp             ECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHH-HHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEESS
T ss_pred             ecCHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHH-HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeeeCCC
Confidence            9865321000001222333333 22457788889888 666664 334444 8899999999999999988 88887889


Q ss_pred             CceEeeecC
Q 019298          335 GSSLKYLDL  343 (343)
Q Consensus       335 ~g~~~~~~l  343 (343)
                      +|+|+|+++
T Consensus       373 ~~~~~~~~~  381 (449)
T 3qgu_A          373 DAPYIWVGF  381 (449)
T ss_dssp             SSSEEEEEC
T ss_pred             CeeEEEEEC
Confidence            999999874

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}

Probab=100.00  E-value=1.8e-40  Score=307.67  Aligned_cols=320  Identities=20%  Similarity=0.262  Sum_probs=260.7

Q ss_pred             ccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCH
Q 019298            3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLP   80 (343)
Q Consensus         3 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~   80 (343)
                      +|+|..+.+++  .++.+......-.   ..+.+.|||+.|.|+.  ...+++.+.+++.+++...  ... |++..|..
T Consensus         7 ~~~~~~~~~~~--~~~~~~~~~~~~~---~~g~~~idl~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~   78 (407)
T 2zc0_A            7 LAGRANWIKGS--ALADVMKKASELQ---KKGVKLISLAAGDPDP--ELIPRAVLGEIAKEVLEKEPKSVM-YTPANGIP   78 (407)
T ss_dssp             SCGGGGGCCCC--HHHHHHHHHHHHH---HSSCCCEECCSCCCCT--TTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCH
T ss_pred             hhhhhccCCch--HHHHHHHhhhccc---CCCCceEeCCCCCCCc--hhCCHHHHHHHHHHHHhhcccccc-CCCCCCCH
Confidence            67888888877  5666665444211   1145789999998762  2346789999999888653  234 98888999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (343)
                      ++|+++++++.+.+|.++++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.++.+++   +
T Consensus        79 ~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~---~  155 (407)
T 2zc0_A           79 ELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDND---G  155 (407)
T ss_dssp             HHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---E
T ss_pred             HHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEcccCCC---C
Confidence            9999999999887787788999999999999999999999999999999999999999999999999999988542   3


Q ss_pred             CCHHHHHhhhc----C--CceEE-EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298          161 VDLDDIESLAD----Q--NTVAL-VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (343)
Q Consensus       161 ~d~~~l~~~~~----~--~~~~i-~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~  233 (343)
                      +|+++|+++++    +  +++++ ++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++....++..++.
T Consensus       156 ~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  235 (407)
T 2zc0_A          156 MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDN  235 (407)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCS
T ss_pred             CCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCC
Confidence            89999999887    5  67776 46799999999999999999999999999999999999999887655455555555


Q ss_pred             CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhh--H-HHHH-HH
Q 019298          234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTI--M-QIMI-HG  308 (343)
Q Consensus       234 ~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~--~-~~l~-~~  308 (343)
                      .+++++++|+||.|+ +|+|+||++++        ++++++++..... ..+++++.+.++ .+++...  . .+++ .+
T Consensus       236 ~~~~i~~~s~sK~~~-~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~  305 (407)
T 2zc0_A          236 EGRVIVAGTLSKVLG-TGFRIGWIIAE--------GEILKKVLMQKQPIDFCAPAISQYIA-LEYLKRGYFEKYHLEGAL  305 (407)
T ss_dssp             SCCEEEEEESTTTTC-TTSCCEEEECC--------HHHHHHHHHHHTTTTSSSCHHHHHHH-HHHHHTTHHHHHTTTTHH
T ss_pred             CCCEEEEcccccccC-CCcceEEEecC--------HHHHHHHHHHHHhhcCCCCHHHHHHH-HHHHHcCCchHHHHHHHH
Confidence            568999999999998 99999999984        3688888766532 345688888887 6666653  2 3333 78


Q ss_pred             HHHHHHHHHHHHhhcC-CCCceeeCCCCceEeeecC
Q 019298          309 NFLENFAGSCVPSYKL-IPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       309 ~~~~~~~~~~~~~L~~-~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++++++++.+.+.|++ +|++.+..|++|+|+|+++
T Consensus       306 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~  341 (407)
T 2zc0_A          306 LGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMFFL  341 (407)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTSCBCCCSBSSEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEecCCCcEEEEEEc
Confidence            8899999999999987 6788876788999999874

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}

Probab=100.00  E-value=4.2e-41  Score=313.10  Aligned_cols=327  Identities=12%  Similarity=0.099  Sum_probs=254.5

Q ss_pred             cCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCC-CCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHH
Q 019298            4 SNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTV-HSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT   82 (343)
Q Consensus         4 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~l   82 (343)
                      +.+..+.+++  +++.+.....+.... .++.++|+|++|.|.. .+.+++++.+.+++.+.... ....|++..|.+++
T Consensus        10 ~~~~~~~~~~--~~~~~~~~~~~~~~~-~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~l   85 (418)
T 3rq1_A           10 KHAKGKKLKD--VIFVTAGQAQADAKE-NGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDS-EHVGYAPIAGIPDF   85 (418)
T ss_dssp             TTTTTCCCCC--HHHHHHHHHHHHHHH-HCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHH-HHHSCCCTTCCHHH
T ss_pred             hhcCCCCCCc--hHHHHHHHHHhhhhh-hcCCCeEECCCCcccCCCCCccccHHHHHHHHHhccc-ccCCCCCCCChHHH
Confidence            4555556666  678887777665431 2355899999998621 23477889998888765432 23479998899999


Q ss_pred             HHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCC
Q 019298           83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD  162 (343)
Q Consensus        83 r~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d  162 (343)
                      |+++++++.+.++.. .+++|++|+|+++++..++++++++||+|++++|+|..|...++..|.+++.+++.+++ +.+|
T Consensus        86 r~~ia~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~~~d  163 (418)
T 3rq1_A           86 LCAAEKECFGNFRPE-GHIRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEH-NNFN  163 (418)
T ss_dssp             HHHHHHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTT-SSBC
T ss_pred             HHHHHHHHhcccCcc-ccccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCC-CCcC
Confidence            999999997644321 12399999999999999999999999999999999999999999999999999886544 7899


Q ss_pred             HHHHHhhhcC----Cce-EEEEeCC-CCCcccccCHHHHHHHHHHHh------hcCcEEEEccCCCccccCCCCCCccc-
Q 019298          163 LDDIESLADQ----NTV-ALVIINP-GNPCGNVYSYQHLQKLAETAN------KLKTLVIADEVYGHLVFGDKPFVPMG-  229 (343)
Q Consensus       163 ~~~l~~~~~~----~~~-~i~~~~p-~nptG~~~~~~~l~~l~~~~~------~~~~~~i~D~ay~~~~~~~~~~~~~~-  229 (343)
                      ++++++.+++    +++ ++++++| |||||.+++.+++++|+++|+      +||+++|+||+|.++.+++....++. 
T Consensus       164 ~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~  243 (418)
T 3rq1_A          164 HEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFN  243 (418)
T ss_dssp             HHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGG
T ss_pred             HHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHH
Confidence            9999998874    555 7888999 999999999999999999999      89999999999999887654322222 


Q ss_pred             ccCC-CCC--EEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-----ccCcchHHHHHHHhccchhh
Q 019298          230 VFGS-TVP--ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-----LGDPATFIQVCIMYGCLSTI  301 (343)
Q Consensus       230 ~~~~-~~~--~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~a~~~~~l~~~  301 (343)
                      .... .++  +++++||||+|+++|+|+||+++...     ++++++.++.....     +..++.++|.++ ..+|.+.
T Consensus       244 ~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~  317 (418)
T 3rq1_A          244 KFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISD-----DEEIADEFFEVNKSTSRATWSNICRPAMRTM-ANIVADP  317 (418)
T ss_dssp             GGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEES-----SHHHHHHHHHHHHHHHHHHTSSCCHHHHHHH-HHHHTCH
T ss_pred             HHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeC-----CHHHHHHHHHHHHHHHhhccCCCchHHHHHH-HHHhCCH
Confidence            2222 234  68999999999999999999987210     14688877765321     245788888888 6667654


Q ss_pred             ---HHHHH----HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          302 ---MQIMI----HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       302 ---~~~l~----~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                         ..|.+    .+++++++++.+.+.|+++ |+.+..+++|+|+|+++
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~  365 (418)
T 3rq1_A          318 AKFKEYEAERNCYYQLIRDRADIFKQEAAQV-GLPMLPYRGGFFITIPT  365 (418)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCCCCCCSSSEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCceEEEEcCC
Confidence               22433    6778899999999999988 88888999999999863

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0

Probab=100.00  E-value=5.7e-41  Score=307.77  Aligned_cols=305  Identities=20%  Similarity=0.247  Sum_probs=248.4

Q ss_pred             CcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 019298           10 NTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEY   89 (343)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~   89 (343)
                      .+++  ++..+.....+..   .++ ++|||+.|++.    ++.++.+.+++.+++.  ....|++..|..++|++++++
T Consensus         4 ~~~~--~~~~~~~~~~~~~---~~g-~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~g~~~lr~~la~~   71 (376)
T 3ezs_A            4 FEPY--PFERLRALLKEIT---PKK-RGLDLGIGEPQ----FETPKFIQDALKNHTH--SLNIYPKSAFEESLRAAQRGF   71 (376)
T ss_dssp             CCCC--HHHHHHHHHTTCC---CSS-CCCBCSSCCCC----SCCCHHHHHHHHTTGG--GGGSCCCTTCCHHHHHHHHHH
T ss_pred             CCcc--hHHHHHHHHHhhh---ccC-CEEEeCCCCCC----CCCCHHHHHHHHHhhh--hcCCCCCCCCCHHHHHHHHHH
Confidence            3444  5666655444322   235 89999999954    6678999999988873  346899988999999999999


Q ss_pred             HhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCC--CCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHH
Q 019298           90 LSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP--GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIE  167 (343)
Q Consensus        90 ~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~--gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~  167 (343)
                      +.+.+|..+++++|++|+|+++++..++++++++  ||+|+++.|+|..+...++..|.+++.++++.++++.+   +++
T Consensus        72 l~~~~g~~~~~~~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~l~  148 (376)
T 3ezs_A           72 FKRRFKIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTP---SLN  148 (376)
T ss_dssp             HHHHHSCCCCGGGEEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCC---CCC
T ss_pred             HHHHhCCCCCHHHEEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcch---hHH
Confidence            9888888888999999999999999999999999  99999999999999999999999999999876544433   555


Q ss_pred             hhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC-----CCCCEEEEcc
Q 019298          168 SLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-----STVPILTLGS  242 (343)
Q Consensus       168 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~-----~~~~~i~~~S  242 (343)
                      +.+.++++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++.........+     ..+++++++|
T Consensus       149 ~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s  228 (376)
T 3ezs_A          149 EKELQEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHS  228 (376)
T ss_dssp             HHHHHHCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEE
T ss_pred             hhhccCCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEec
Confidence            56656789999999999999999999999999999999999999999999988763322222111     4568999999


Q ss_pred             CccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHh
Q 019298          243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPS  321 (343)
Q Consensus       243 ~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~  321 (343)
                      +||.||++|+|+||++++        +++++.++..... .++++++.+.++ .++|.....+-+.+++++++++.+.+.
T Consensus       229 ~sK~~g~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~l~~~  299 (376)
T 3ezs_A          229 LSKRSSAPGLRSGFIAGD--------SRLLEKYKAFRAYLGYTSANAIQKAS-EAAWLDDRHAEFFRNIYANNLKLARKI  299 (376)
T ss_dssp             STTTTTCGGGCCEEEEEC--------HHHHHHHHHHHTTTCCCCCHHHHHHH-HHHHHCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhccCCccceeEEEeeC--------HHHHHHHHHHHhhhcCCCChHHHHHH-HHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999984        4788888876543 457788888888 666665434344889999999999999


Q ss_pred             hcCCCCceeeCCCCceEeeecC
Q 019298          322 YKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       322 L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      |+   ++.  .|++|+|+|+++
T Consensus       300 l~---~~~--~~~~~~~~~~~~  316 (376)
T 3ezs_A          300 FK---NTL--IYPYSFYVYLPV  316 (376)
T ss_dssp             ST---TCC--CCSBSSEEEEEC
T ss_pred             hc---CCC--CCCcceEEEEEC
Confidence            88   444  688999999874

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}

Probab=100.00  E-value=1e-41  Score=316.47  Aligned_cols=322  Identities=16%  Similarity=0.147  Sum_probs=240.7

Q ss_pred             ccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHH
Q 019298            3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT   82 (343)
Q Consensus         3 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~l   82 (343)
                      .+.|....+++  ++..++..+..+.     .+++|||++|+|.   .++.++.+.++++++. .....+|.+..|.++|
T Consensus        16 ~~~~~~~~~~~--~i~~~~~~~~~~~-----~~~~i~l~~g~~~---d~~~~~~v~~a~~~a~-~~~~~~y~~~~g~~~l   84 (409)
T 4eu1_A           16 TQGPGSMGKPD--PILGLGQDFRMDP-----AKRKVNLSIGVYR---DDADQPFVLECVKQAT-LGTNMDYAPVTGIASF   84 (409)
T ss_dssp             -------------CHHHHHHHHHHCC-----CSSCEECCCSSCC---CTTSCCCCCHHHHTCC-CCSCCCCCCTTCCHHH
T ss_pred             HhhcCCCCCCC--hHHHHHHHHhhCC-----CcCceeeeeeEEE---CCCCCEeecHHHHhcC-ccccccCCCCCCcHHH
Confidence            46677888888  7888888887765     5789999999962   2344455666666653 3345689998999999


Q ss_pred             HHHHHHHHhhhCCCCCCCCcEE--EecChHHHHHHHH---HHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCC
Q 019298           83 RRAIAEYLSRDLPYKLTPNDVF--VTSGCTQAIDVAM---ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK  157 (343)
Q Consensus        83 r~~ia~~~~~~~~~~~~~~~i~--~~~g~~~al~~~~---~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~  157 (343)
                      |+++++++.+..+..+++++|.  .+.|+++++..+.   +.++++||+|++++|+|..+...++..|.+++.+++..++
T Consensus        85 r~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~  164 (409)
T 4eu1_A           85 VEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPA  164 (409)
T ss_dssp             HHHHHHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETT
T ss_pred             HHHHHHHHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCc
Confidence            9999999843222223378884  5899999988754   4456899999999999999999999999999999886566


Q ss_pred             CCCCCHHHHHhhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC--CCCccccc-
Q 019298          158 GWEVDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK--PFVPMGVF-  231 (343)
Q Consensus       158 ~~~~d~~~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~--~~~~~~~~-  231 (343)
                      ++.+|++++++.++   +.++++++++||||||.+++.+++++|+++|++||+++|+||+|+++.+++.  ...++..+ 
T Consensus       165 ~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~  244 (409)
T 4eu1_A          165 TKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLV  244 (409)
T ss_dssp             TTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHH
T ss_pred             CCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHH
Confidence            78899999999885   2455667799999999999999999999999999999999999999988762  11222222 


Q ss_pred             CCCCCEEEEccCccccCCCCCcEEEE--EEeCCCCCCCchH----HHHHHhhhh-ccccCcchHHHHHHHhccchhh---
Q 019298          232 GSTVPILTLGSLSKRWIVPGWRLGWF--VTTDPCGMFRKPK----VVERMKKYF-DILGDPATFIQVCIMYGCLSTI---  301 (343)
Q Consensus       232 ~~~~~~i~~~S~sK~~~~~G~r~G~i--~~~~~~~~~~~~~----~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~---  301 (343)
                      +..+++++++||||+|+++|+|+||+  ++++       ++    +++.++... ....+++.+.|.++ ..+|.+.   
T Consensus       245 ~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~  316 (409)
T 4eu1_A          245 DMVPNLIVAQSFSKNFGLYGHRCGALHISTAS-------AEEAKRLVSQLALLIRPMYNNPPLYGAWVV-SSILKDPQLT  316 (409)
T ss_dssp             TTSSCCEEEEECTTTSSCGGGCCEEEEEECSS-------HHHHHHHHHHHHHHHHHHHSSCCHHHHHHH-HHHHHCHHHH
T ss_pred             hhCCcEEEEecCcccccCccCCceEEEEEeCC-------HHHHHHHHHHHHHHHhhhcCCCChHHHHHH-HHHhCCHHHH
Confidence            34568899999999999999999997  6643       45    666666554 33556778888888 6666653   


Q ss_pred             HHH---HH-HHHHHHHHHHHHHHhhcCCC--C-ceeeCCCCceEeeecC
Q 019298          302 MQI---MI-HGNFLENFAGSCVPSYKLIP--E-LINFKSTGSSLKYLDL  343 (343)
Q Consensus       302 ~~~---l~-~~~~~~~~~~~~~~~L~~~~--g-~~~~~~~~g~~~~~~l  343 (343)
                      .+|   ++ .+++++++++.+.+.|++++  + +.+..|++|+|+|+++
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~  365 (409)
T 4eu1_A          317 ALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHIERQVGMMAYTGL  365 (409)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHSCSSEEECCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCceEEEEeCC
Confidence            123   22 88899999999999998872  1 6777899999999864

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=1.3e-40  Score=309.03  Aligned_cols=317  Identities=23%  Similarity=0.342  Sum_probs=259.6

Q ss_pred             ccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHH
Q 019298            3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT   82 (343)
Q Consensus         3 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~l   82 (343)
                      +|+|....+++  ++..+...+.+...   .++++++|+.|.+.    ++.++.+.+++ +++... ...|++..|..++
T Consensus        16 ~~~~~~~~~~~--~~~~~~~~~~~~~~---~g~~~i~l~~~~~~----~~~~~~v~~a~-~~l~~~-~~~y~~~~g~~~l   84 (409)
T 2gb3_A           16 FSDRVLLTEES--PIRKLVPFAEMAKK---RGVRIHHLNIGQPD----LKTPEVFFERI-YENKPE-VVYYSHSAGIWEL   84 (409)
T ss_dssp             CCHHHHSCCCC--TTGGGHHHHHHHHH---TTCEEEECSSCCCC----SCCCTHHHHHH-HHTCCS-SCCCCCTTCCHHH
T ss_pred             HHHHhhcCCcc--HHHHHHHHHHHHHh---cCCCEEeccCCCCC----CCCCHHHHHHH-HHHhcC-CCCCCCCCCcHHH
Confidence            56777788877  55555555443321   26789999999953    56778999999 887653 3579888899999


Q ss_pred             HHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCC
Q 019298           83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD  162 (343)
Q Consensus        83 r~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d  162 (343)
                      |+++++++.+.+|.++++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.+++++++++.+ 
T Consensus        85 ~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-  163 (409)
T 2gb3_A           85 REAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-  163 (409)
T ss_dssp             HHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-
T ss_pred             HHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-
Confidence            9999999998888888899999999999999999999999999999999999999999999999999998865445555 


Q ss_pred             HHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEc
Q 019298          163 LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLG  241 (343)
Q Consensus       163 ~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~  241 (343)
                      +++|+++++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++. ..++  +.. .+++++++
T Consensus       164 ~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~-~~~~--~~~~~~~~i~~~  240 (409)
T 2gb3_A          164 PQNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGE-FASA--LSIESDKVVVID  240 (409)
T ss_dssp             CTTGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC-CCCG--GGSCCTTEEEEE
T ss_pred             HHHHHHhhCcCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCC-CCCc--cccCCCCEEEEe
Confidence            8899998888889999999999999999999999999999999999999999999887653 2222  221 35789999


Q ss_pred             cCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHH
Q 019298          242 SLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVP  320 (343)
Q Consensus       242 S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~  320 (343)
                      |+||.|+++|+|+||+++++       +++++.++.......+++++.+.++ .++|+....+++ .+++++++++.+.+
T Consensus       241 s~sK~~g~~G~r~G~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~l~~  312 (409)
T 2gb3_A          241 SVSKKFSACGARVGCLITRN-------EELISHAMKLAQGRLAPPLLEQIGS-VGLLNLDDSFFDFVRETYRERVETVLK  312 (409)
T ss_dssp             ESTTTTTCGGGCCEEEECSC-------HHHHHHHHHHHHHSCCCCHHHHHHH-HHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchhccCCccceEEEEEECc-------HHHHHHHHHHHhccCCCCHHHHHHH-HHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999853       2577877766432117788888887 666654344555 78889999999999


Q ss_pred             hhcCCCCcee-eCCCCceEeeecC
Q 019298          321 SYKLIPELIN-FKSTGSSLKYLDL  343 (343)
Q Consensus       321 ~L~~~~g~~~-~~~~~g~~~~~~l  343 (343)
                      .|+++ |+.+ ..|++|+|+|+++
T Consensus       313 ~L~~~-g~~~~~~~~~~~~~~~~~  335 (409)
T 2gb3_A          313 KLEEH-GLKRFTKPSGAFYITAEL  335 (409)
T ss_dssp             HHHHT-TCCCBCCCSBSSEEEEEC
T ss_pred             HHHHc-CceeeeCCCeeEEEEEEe
Confidence            99988 8887 7889999999864

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1

Probab=100.00  E-value=3.2e-41  Score=314.67  Aligned_cols=316  Identities=20%  Similarity=0.246  Sum_probs=256.4

Q ss_pred             ccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCH
Q 019298            3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLP   80 (343)
Q Consensus         3 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~   80 (343)
                      +|+|....+++  +++.+...    .    .+++.|||+.|.|+.  ...+++.+.+++.++++..  ....|++..|.+
T Consensus        21 ~~~~~~~~~~~--~~~~~~~~----~----~~~~~idl~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~   88 (425)
T 1vp4_A           21 ISKIGQNMKSS--IIREILKF----A----ADKDAISFGGGVPDP--ETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDP   88 (425)
T ss_dssp             CCHHHHTCCCC--CHHHHTTT----T----TSTTCEECCCCSCCG--GGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCH
T ss_pred             hhhhhhcCCCc--HHHHHHHh----c----cCCCceeCCCCCCCc--ccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCH
Confidence            56666666666  55554331    1    145789999998762  2346788999999888653  235798888999


Q ss_pred             HHHHHHHHHHhhhCCCC-CCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC
Q 019298           81 LTRRAIAEYLSRDLPYK-LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW  159 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~-~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  159 (343)
                      ++|+++++++.+++|.. +++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.++++++   
T Consensus        89 ~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---  165 (425)
T 1vp4_A           89 VLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD---  165 (425)
T ss_dssp             HHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---
T ss_pred             HHHHHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCC---
Confidence            99999999997766766 78899999999999999999999999999999999999999999999999999988642   


Q ss_pred             CCCHHHHHhhhcC--------CceEE-EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccc
Q 019298          160 EVDLDDIESLADQ--------NTVAL-VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV  230 (343)
Q Consensus       160 ~~d~~~l~~~~~~--------~~~~i-~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~  230 (343)
                      ++|+++|++.+++        ++++| ++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++....++..
T Consensus       166 ~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~  245 (425)
T 1vp4_A          166 GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFK  245 (425)
T ss_dssp             EECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHH
T ss_pred             CCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHH
Confidence            3899999998865        67777 47899999999999999999999999999999999999999887655445555


Q ss_pred             cCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhh--HHHHH-
Q 019298          231 FGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTI--MQIMI-  306 (343)
Q Consensus       231 ~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~--~~~l~-  306 (343)
                      ++..+++++++|+||.|+ +|+|+||++++        +++++.++.... ...+++++.|.++ ..+|...  .++++ 
T Consensus       246 ~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~  315 (425)
T 1vp4_A          246 IGGPERVVLLNTFSKVLA-PGLRIGMVAGS--------KEFIRKIVQAKQSADLCSPAITHRLA-ARYLERYDLLEQLKP  315 (425)
T ss_dssp             HHCTTTEEEEEESTTTTC-GGGCEEEEECC--------HHHHHHHHHHHHHHHSSCCHHHHHHH-HHHHHHSCHHHHTHH
T ss_pred             hCCCCCEEEEeccccccc-cccceEEEeeC--------HHHHHHHHHHhhhhcCCCCHHHHHHH-HHHHhcCCHHHHHHH
Confidence            545568999999999999 99999999985        368888876543 2356688888888 6666653  34444 


Q ss_pred             HHHHHHHHHHHHHHhhcC-CC---CceeeCCCCceEeeecC
Q 019298          307 HGNFLENFAGSCVPSYKL-IP---ELINFKSTGSSLKYLDL  343 (343)
Q Consensus       307 ~~~~~~~~~~~~~~~L~~-~~---g~~~~~~~~g~~~~~~l  343 (343)
                      .+++++++++.+.+.|++ +|   |+.+..|++|+|+|+++
T Consensus       316 ~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~  356 (425)
T 1vp4_A          316 TIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTL  356 (425)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEc
Confidence            788899999999999987 45   68877889999999874

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*

Probab=100.00  E-value=2.6e-40  Score=304.79  Aligned_cols=294  Identities=18%  Similarity=0.302  Sum_probs=253.0

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      +.++++|+.|++    .+++++.+.+++.+++.+. ...|++  +..++++++++++.+.+|..+++++|++|+|+++++
T Consensus        31 ~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~  103 (391)
T 4dq6_A           31 TNDLLPMWVADM----DFKAAPCIIDSLKNRLEQE-IYGYTT--RPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAI  103 (391)
T ss_dssp             CSCSEECCSSSC----SSCCCHHHHHHHHHHHTTC-CCCCBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHH
T ss_pred             CCCceeccccCC----CCCCCHHHHHHHHHHHhCC-CCCCCC--CCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHH
Confidence            578899999984    4788999999999998753 346765  569999999999999888778899999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecC--CCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccC
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL--PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS  191 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~  191 (343)
                      ..++++++++||+|+++.|+|..+...++..|.+++.++++  .++++.+|++++++++++ ++++++++|+||||.+++
T Consensus       104 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~~  182 (391)
T 4dq6_A          104 SLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVWT  182 (391)
T ss_dssp             HHHHHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCCC
T ss_pred             HHHHHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCcC
Confidence            99999999999999999999999999999999999999887  445677999999999987 899999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC--CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCch
Q 019298          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP  269 (343)
Q Consensus       192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~  269 (343)
                      .+++++|+++|++||+++|+||+|..+.+++....++..+..  .+++++++|+||.++++|+|+||+++++       +
T Consensus       183 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-------~  255 (391)
T 4dq6_A          183 KDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPD-------E  255 (391)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCS-------H
T ss_pred             HHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCC-------H
Confidence            999999999999999999999999999988766556555543  3689999999999999999999999863       3


Q ss_pred             HHHHHHhhhhc--cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcC-CCCceeeCCCCceEeeecC
Q 019298          270 KVVERMKKYFD--ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKL-IPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       270 ~~~~~l~~~~~--~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~-~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++++.++....  ..++++++.+.++ .+++....++++ .+++++++++.+.+.|++ +||+.+..+++++++|+++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~  332 (391)
T 4dq6_A          256 KDYKLLDDAFTRIDIKRNNCFSLVAT-EASYNNGESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDF  332 (391)
T ss_dssp             HHHHHHHHHHHHTTCCCCCHHHHHHH-HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCSBSSEEEEEC
T ss_pred             HHHHHHHHHHHhhcCCCCCHHHHHHH-HHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEecCCCccEEEEEEh
Confidence            67887776642  2346788888877 566655455565 888999999999999987 7899988999999999864

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3

Probab=100.00  E-value=1.7e-40  Score=306.15  Aligned_cols=293  Identities=18%  Similarity=0.254  Sum_probs=243.7

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHH-HHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPL-TRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~-lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      +++|+|+.|++    .+++++.+.+++.+++... ...|++.  ..+ +|+++++++.+.+|..+++++|++|+|+++++
T Consensus        28 ~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al  100 (390)
T 1d2f_A           28 ADLLPFTISDM----DFATAPCIIEALNQRLMHG-VFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMV  100 (390)
T ss_dssp             --CEECCSSSC----SSCCCHHHHHHHHHHHTTC-CCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHH
T ss_pred             CCeeEeeecCC----CCCCCHHHHHHHHHHHhCC-CCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHH
Confidence            47899999984    3678899999999988643 4578774  678 99999999998888888899999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCC-CCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccC
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK-GWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYS  191 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~  191 (343)
                      ..++++++++||+|+++.|+|.++...++..|.+++.++++.++ +|.+|+++|++++++ +++++++++|+||||.+++
T Consensus       101 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~  180 (390)
T 1d2f_A          101 SELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWT  180 (390)
T ss_dssp             HHHHHHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCC
T ss_pred             HHHHHHhcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcC
Confidence            99999999999999999999999999999999999999886543 467999999999976 7889999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (343)
Q Consensus       192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  271 (343)
                      .+++++|+++|++||+++|+||+|..+.+++..+.++..+....... +.|+||.|+++|+|+||+++++       +++
T Consensus       181 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~-------~~~  252 (390)
T 1d2f_A          181 CDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIEN-------SSS  252 (390)
T ss_dssp             TTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECS-------HHH
T ss_pred             HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECC-------HHH
Confidence            99999999999999999999999999988765554544443221023 9999999999999999999853       467


Q ss_pred             HHHHhhhhc--cc-cCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcC-CCCceeeCCCCceEeeecC
Q 019298          272 VERMKKYFD--IL-GDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKL-IPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       272 ~~~l~~~~~--~~-~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~-~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++.++....  .. ++++++.+.++ .+++....++++ .+++++++++.+.+.|++ +||+.+..+++++++|+++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~  328 (390)
T 1d2f_A          253 RDAYLSALKGRDGLSSPSVLALTAH-IAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDL  328 (390)
T ss_dssp             HHHHHHHHHTTSCCCSCCHHHHHHH-HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEEC
T ss_pred             HHHHHHHHhhhcccCCCCHHHHHHH-HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEecCCccEEEEEEc
Confidence            777776543  23 46788888777 566664345555 888899999999999988 8898877889999999864

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*

Probab=100.00  E-value=5.4e-40  Score=306.96  Aligned_cols=296  Identities=21%  Similarity=0.310  Sum_probs=235.3

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc----CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS----EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g  108 (343)
                      ++.++|+|++|+++    ++.++.+.+++.+++..    ....+|++..|.++||+++++|+.+  ++++++++|++|+|
T Consensus        54 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~--~~~~~~~~i~~t~G  127 (432)
T 3ei9_A           54 PDAQVISLGIGDTT----EPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYG--GLGIGDDDVFVSDG  127 (432)
T ss_dssp             TTCCCEECSSCCCC----SCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHT--TTTCCGGGEEEESC
T ss_pred             CCCCeEEccCCCCC----CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHc--cCCCCcceEEECCC
Confidence            35689999999854    78899999999998863    2345898888999999999999973  56678899999999


Q ss_pred             hHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCc------------eeEEeecCCCCCCCCCHHHHHhhhcCCceE
Q 019298          109 CTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHI------------EVRHFDLLPDKGWEVDLDDIESLADQNTVA  176 (343)
Q Consensus       109 ~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~------------~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~  176 (343)
                      +++++..+ ..++++||+|++++|+|.++...++..|.            +++.++++.++++..|+++     .+++++
T Consensus       128 ~~~al~~l-~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~  201 (432)
T 3ei9_A          128 AKCDISRL-QVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST-----VGRTDI  201 (432)
T ss_dssp             HHHHHHHH-HHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-----CCCCSE
T ss_pred             hHHHHHHH-HHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh-----CCCCCE
Confidence            99999975 67788999999999999999998888874            6777877655555566543     246889


Q ss_pred             EEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC-CCCCEEEEccCccccCCCCCcEE
Q 019298          177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLG  255 (343)
Q Consensus       177 i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G  255 (343)
                      +++++||||||.+++.+++++|+++|++||+++|+||+|+++.+++.. .++..+. ..+++++++|+||+|+++|+|+|
T Consensus       202 v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~-~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G  280 (432)
T 3ei9_A          202 IFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNP-RSIFEIPGAEEVAMETASFSNYAGFTGVRLG  280 (432)
T ss_dssp             EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCC-SSGGGSTTGGGTEEEEEESHHHHCTTTTCCE
T ss_pred             EEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCC-CChhhcCCCCCeEEEEecchhccCCcccceE
Confidence            999999999999999999999999999999999999999999877543 2333332 23578999999999999999999


Q ss_pred             EEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeC
Q 019298          256 WFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGSCVPSYKLIPELINFK  332 (343)
Q Consensus       256 ~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~  332 (343)
                      |+++++.........+++.+..... ...++++++|.++ .+++.+ ..++++ .+++++++++.+.+.|+++ |+.+..
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~  358 (432)
T 3ei9_A          281 WTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGA-LACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL-GYDVYG  358 (432)
T ss_dssp             EEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHH-HHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEE
T ss_pred             EEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHH-HHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC-CceecC
Confidence            9999753200000113566665533 3456788888887 556543 334555 8899999999999999988 888778


Q ss_pred             CCCceEeeecC
Q 019298          333 STGSSLKYLDL  343 (343)
Q Consensus       333 ~~~g~~~~~~l  343 (343)
                      +++|+|+|+++
T Consensus       359 ~~~~~~~~~~~  369 (432)
T 3ei9_A          359 GKNAPYVWVHF  369 (432)
T ss_dssp             CSSSSEEEEEC
T ss_pred             CCcceEEEEEC
Confidence            88999999875

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}

Probab=100.00  E-value=4.2e-40  Score=306.76  Aligned_cols=295  Identities=15%  Similarity=0.227  Sum_probs=255.0

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      ++++|+|++|++    .++.+|.+.+++.+++... ...|++.  ..++++++++++.+.+++.+++++|++++|+++++
T Consensus        60 g~~~i~~~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~  132 (421)
T 3l8a_A           60 NPELLQMWVADM----DFLPVPEIKEAIINYGREH-IFGYNYF--NDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAI  132 (421)
T ss_dssp             CTTCEECCSSCC----CSCCCHHHHHHHHHHHHHC-CSSCBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHH
T ss_pred             CCCeeecccCCC----CCCCCHHHHHHHHHHHhcC-CcCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHH
Confidence            578999999984    4788999999999998753 3467663  48999999999999888888999999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecC-CCCCCCCCHHHHHhhhc-CCceEEEEeCCCCCcccccC
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL-PDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYS  191 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~~~-~~~~~i~~~~p~nptG~~~~  191 (343)
                      ..++++++++||+|+++.|+|.++...+...|.+++.+++. .+.++.+|+++|+++++ ++++++++++|+||||.+++
T Consensus       133 ~~a~~~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~  212 (421)
T 3l8a_A          133 SIALQAFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWD  212 (421)
T ss_dssp             HHHHHHHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCC
T ss_pred             HHHHHHhcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCC
Confidence            99999999999999999999999999999999999999886 45567799999999997 68999999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC--CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCch
Q 019298          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP  269 (343)
Q Consensus       192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~  269 (343)
                      .+++++|+++|++||+++|+||+|.++.+++....++..+..  .++++++.|+||+|+++|+|+||+++++       +
T Consensus       213 ~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~-------~  285 (421)
T 3l8a_A          213 NDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQN-------E  285 (421)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCS-------H
T ss_pred             HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCC-------H
Confidence            999999999999999999999999999988766666655543  4688999999999999999999999863       4


Q ss_pred             HHHHHHhhhhc--cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          270 KVVERMKKYFD--ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       270 ~~~~~l~~~~~--~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++++.++....  ...+++++++.++ .+++....++++ .+++++++++.+.+.|+++|++.+..+++++++|+++
T Consensus       286 ~l~~~~~~~~~~~~~~~~n~~~~~a~-~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~~~~~~~v~~  361 (421)
T 3l8a_A          286 SLRRKFQYRQLANNQHEVPTVGMIAT-QAAFQYGKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDF  361 (421)
T ss_dssp             HHHHHHHHHHHHTTCSCCCHHHHHHH-HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECCSBSSEEEEEC
T ss_pred             HHHHHHHHHHHhcccCCCCHHHHHHH-HHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCCCeeEEEEEec
Confidence            68887776642  2447788888888 666665566666 8888999999999999887889988999999999875

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...

Probab=100.00  E-value=5.1e-41  Score=310.19  Aligned_cols=328  Identities=17%  Similarity=0.152  Sum_probs=241.5

Q ss_pred             CccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHH
Q 019298            5 NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPT-VHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR   83 (343)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr   83 (343)
                      ++..+.+++  +++.+...+.+..     ++++|||+.|.+. .....++++.+.+++.+++.....++|++..|..++|
T Consensus         3 ~~~~~~~~~--~~~~~~~~~~~~~-----~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr   75 (396)
T 2q7w_A            3 ENITAAPAD--PILGLADLFRADE-----RPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFG   75 (396)
T ss_dssp             TTCCCCCC------------------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHH
T ss_pred             cccccCCCc--hHHHHHHHHhccC-----CCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHH
Confidence            456667766  6666666555433     5678999999842 1122467799999999887654556898888999999


Q ss_pred             HHHHHHHhhhCCCCCCCCcEEE--ecChHHHHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC
Q 019298           84 RAIAEYLSRDLPYKLTPNDVFV--TSGCTQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW  159 (343)
Q Consensus        84 ~~ia~~~~~~~~~~~~~~~i~~--~~g~~~al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  159 (343)
                      +++++++.+..+..+++++|++  |+|+++++..+++.+.  .+||+|+++.|+|..+...++..|.+++.+++.+++++
T Consensus        76 ~~la~~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~  155 (396)
T 2q7w_A           76 RCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH  155 (396)
T ss_dssp             HHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTT
T ss_pred             HHHHHHHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCC
Confidence            9999999654333356889998  9999999999987763  69999999999999999999999999999988654567


Q ss_pred             CCCHHHHHhhhcC---CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCC-CCCCcccccCC-C
Q 019298          160 EVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD-KPFVPMGVFGS-T  234 (343)
Q Consensus       160 ~~d~~~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~-~~~~~~~~~~~-~  234 (343)
                      .+|++++++.+++   +++++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++ ....++..+.. .
T Consensus       156 ~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~  235 (396)
T 2q7w_A          156 TLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMH  235 (396)
T ss_dssp             EECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHC
T ss_pred             CcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcC
Confidence            8999999998865   35677889999999999999999999999999999999999999988763 12222332322 3


Q ss_pred             CCEEEEccCccccCCCCCcEEEEEE--eCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhh------HHHH
Q 019298          235 VPILTLGSLSKRWIVPGWRLGWFVT--TDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTI------MQIM  305 (343)
Q Consensus       235 ~~~i~~~S~sK~~~~~G~r~G~i~~--~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~------~~~l  305 (343)
                      +++++++|+||.|+++|+|+||+++  ++++.+   .++++.+.... ..+..++++.|.++ ..+|++.      .+++
T Consensus       236 ~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~l~~~~~~~~  311 (396)
T 2q7w_A          236 KELIVASSYSXNFGLYNERVGACTLVAADSETV---DRAFSQMKAAIRANYSNPPAHGASVV-ATILSNDALRAIWEQEL  311 (396)
T ss_dssp             SCEEEEEECTTTTTCGGGCCEEEEEECSSHHHH---HHHHHHHHHHHHTTTSSCCHHHHHHH-HHHHTSHHHHHHHHHHH
T ss_pred             CcEEEEEeccccccccccccceEEEEcCCHHHH---HHHHHHHHHHHhhccCCCCcHHHHHH-HHHhcChhhHHHHHHHH
Confidence            5789999999999999999999986  331000   13555555432 23445588888887 6666653      2344


Q ss_pred             H-HHHHHHHHHHHHHHhhcCCC---CceeeCCCCceEeeecC
Q 019298          306 I-HGNFLENFAGSCVPSYKLIP---ELINFKSTGSSLKYLDL  343 (343)
Q Consensus       306 ~-~~~~~~~~~~~~~~~L~~~~---g~~~~~~~~g~~~~~~l  343 (343)
                      + .+++++++++.+.+.|++++   ++.+..|++|+|+|+++
T Consensus       312 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~  353 (396)
T 2q7w_A          312 TDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGL  353 (396)
T ss_dssp             HHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCC
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCceEEEecC
Confidence            4 78889999999999998873   37776889999999864

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*

Probab=100.00  E-value=7.4e-40  Score=306.33  Aligned_cols=304  Identities=18%  Similarity=0.292  Sum_probs=247.4

Q ss_pred             HhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC-----------CCCCCCCCCCHHHHHHHHHHHhhh
Q 019298           25 MQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-----------FNGYAPTAGLPLTRRAIAEYLSRD   93 (343)
Q Consensus        25 ~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~Y~~~~g~~~lr~~ia~~~~~~   93 (343)
                      .+.++...++...|+|+.+.    + ....+.+.+++++......           ..+|++..|.++||+++++++.+.
T Consensus        28 ~~~y~~~~~p~~~i~lg~~~----~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~  102 (435)
T 3piu_A           28 KNPYHEVHNTNGIIQMGLAE----N-QLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEI  102 (435)
T ss_dssp             HSBCBTTTBTTSBEECSSCC----C-CSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHH
T ss_pred             cCCCCcccCCCCeEEecccc----c-cccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHh
Confidence            34455445677788999976    2 2347888888877544221           146999899999999999999865


Q ss_pred             CC--CCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHH-hcCceeEEeecCCCCCCCCCHHHHHhhh
Q 019298           94 LP--YKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA-FRHIEVRHFDLLPDKGWEVDLDDIESLA  170 (343)
Q Consensus        94 ~~--~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~~~l~~~~  170 (343)
                      ++  ..+++++|++|+|+++++..++++++++||.|+++.|+|..+...+. ..|.+++.+++++++++.+|+++|++++
T Consensus       103 ~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l  182 (435)
T 3piu_A          103 RGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAY  182 (435)
T ss_dssp             TTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHH
T ss_pred             hCCCCCCCHHHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHH
Confidence            44  45778999999999999999999999999999999999999988777 6899999999887667889999999988


Q ss_pred             cC------CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC----------C
Q 019298          171 DQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS----------T  234 (343)
Q Consensus       171 ~~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~----------~  234 (343)
                      ++      ++++|++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++....++..+..          .
T Consensus       183 ~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  262 (435)
T 3piu_A          183 QEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVW  262 (435)
T ss_dssp             HHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGG
T ss_pred             HHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCC
Confidence            75      7889999999999999999999999999999999999999999998887765544433322          4


Q ss_pred             CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhhH---HHHH-HHHH
Q 019298          235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIM---QIMI-HGNF  310 (343)
Q Consensus       235 ~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~---~~l~-~~~~  310 (343)
                      +++++++|+||.||++|+|+||+++++       +++.+.++.... ....+++.+.++ .+++.+..   ++++ .+++
T Consensus       263 ~~~i~i~s~sK~~g~~G~r~G~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~  333 (435)
T 3piu_A          263 QRVHVVYSLSKDLGLPGFRVGAIYSND-------DMVVAAATKMSS-FGLVSSQTQHLL-SAMLSDKKLTKNYIAENHKR  333 (435)
T ss_dssp             GGEEEEEESSSSSCCGGGCEEEEEESC-------HHHHHHHHHHGG-GSCCCHHHHHHH-HHHHHCHHHHHHHHHHHHHH
T ss_pred             CCEEEEEeeecccCCCceeEEEEEeCC-------HHHHHHHHHHhh-cCCCCHHHHHHH-HHHhcChHHHHHHHHHHHHH
Confidence            678999999999999999999999854       357777765544 445677888777 56666432   1333 7888


Q ss_pred             HHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          311 LENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       311 ~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++++++.+.+.|+++ |+.+..+++|+|+|+++
T Consensus       334 ~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~l  365 (435)
T 3piu_A          334 LKQRQKKLVSGLQKS-GISCLNGNAGLFCWVDM  365 (435)
T ss_dssp             HHHHHHHHHHHHHTT-TCEECCCCSSSEEEEEC
T ss_pred             HHHHHHHHHHHHHhc-CCcccCCCeeEEEEEEc
Confidence            999999999999988 88887899999999875

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}

Probab=100.00  E-value=9.2e-41  Score=312.00  Aligned_cols=295  Identities=15%  Similarity=0.204  Sum_probs=242.1

Q ss_pred             cceeEeccCCC-CCCCCCCCcHHH--HHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCc---EEEecC
Q 019298           35 KKVISLAMGDP-TVHSCFHTTHVA--TEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPND---VFVTSG  108 (343)
Q Consensus        35 ~~~i~l~~g~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~---i~~~~g  108 (343)
                      +++|||+.|.| +    ++.++.+  .+++.+++.......|++..|.+++|+++++++.+.+ .++++++   |++|+|
T Consensus        47 ~~~i~l~~g~~~~----~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~-~~~~~~~~~~i~~t~g  121 (430)
T 2x5f_A           47 STTYNATIGMATN----KDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDN-PELSIDNMSRPIVTNA  121 (430)
T ss_dssp             TCSEECCCSSCEE----TTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHC-TTCCGGGBCCCEEESH
T ss_pred             CCcEEeeeeeccC----CCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccC-cccCCCccceEEEcCC
Confidence            46899999996 4    4445555  6666655543235689988899999999999998764 6778889   999999


Q ss_pred             hHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh-cCceeEEeecCCCCCCCCCHHHHHhhhcC---CceEEEEeCCCC
Q 019298          109 CTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF-RHIEVRHFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGN  184 (343)
Q Consensus       109 ~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~~~~p~n  184 (343)
                      +++++..++++++++||+|+++.|+|..+...++. .|.+++.++++.++ +.+|+++|++.+++   +++++++++|||
T Consensus       122 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~~~~v~i~~p~n  200 (430)
T 2x5f_A          122 LTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKD-GHYTTDSLVEALQSYNKDKVIMILNYPNN  200 (430)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTT-SCBCSHHHHHHHHHCCSSEEEEEECSSCT
T ss_pred             chHHHHHHHHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCcc-CCcCHHHHHHHHHhcCCCCEEEEEcCCCC
Confidence            99999999999999999999999999999999999 99999999886543 67999999999876   788899999999


Q ss_pred             CcccccCHHHHHHHHHHHhh-----cCcEEEEccCCCccccCCCCCCccc-ccCC-CCC---EEEEccCccccCCCCCcE
Q 019298          185 PCGNVYSYQHLQKLAETANK-----LKTLVIADEVYGHLVFGDKPFVPMG-VFGS-TVP---ILTLGSLSKRWIVPGWRL  254 (343)
Q Consensus       185 ptG~~~~~~~l~~l~~~~~~-----~~~~~i~D~ay~~~~~~~~~~~~~~-~~~~-~~~---~i~~~S~sK~~~~~G~r~  254 (343)
                      |||.+++.+++++|+++|++     +|+++|+||+|..+.+++....++. .+.. .++   +++++|+||.|+++|+|+
T Consensus       201 ptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ri  280 (430)
T 2x5f_A          201 PTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRV  280 (430)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCC
T ss_pred             CCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCe
Confidence            99999999999999999999     9999999999999988765444443 3432 457   899999999999999999


Q ss_pred             EEEEEeCCCCCCCchHHHHHHhhhhc-----cccCcchHHHHHHHhccch-hhHHHHH----HHHHHHHHHHHHHHhhc-
Q 019298          255 GWFVTTDPCGMFRKPKVVERMKKYFD-----ILGDPATFIQVCIMYGCLS-TIMQIMI----HGNFLENFAGSCVPSYK-  323 (343)
Q Consensus       255 G~i~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~a~~~~~l~-~~~~~l~----~~~~~~~~~~~~~~~L~-  323 (343)
                      ||+++.++     ++++++.++....     ..++++++.|.++ ..+|. +. .|.+    .+++++++++.+.+.|+ 
T Consensus       281 G~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~  353 (430)
T 2x5f_A          281 GFMTFGTS-----DQTTKEVLEAKVKGLIRSNISSGPLPTQSAV-KHVLKNNK-QFDKEIEQNIQTLKERYEVTKEVVYA  353 (430)
T ss_dssp             EEEEEBCC-----CHHHHHHHHHHHHHHHHTTTSSCCHHHHHHH-HHHHHSCH-HHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEEEecC-----CHHHHHHHHHHHhhhhhcccCCCChHHHHHH-HHHHccCh-HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99998210     1367787776543     3467888999888 67776 53 3433    78889999999999998 


Q ss_pred             ---CCCCceeeCCCCceEeeecC
Q 019298          324 ---LIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       324 ---~~~g~~~~~~~~g~~~~~~l  343 (343)
                         .+ |+.+..+++|+|+|+++
T Consensus       354 ~~~~~-g~~~~~~~~g~~~~~~~  375 (430)
T 2x5f_A          354 DQYHS-HWQAYDFNSGYFMAIKV  375 (430)
T ss_dssp             GGGTT-TEEECCCCBSSEEEEEE
T ss_pred             hCCCC-CceeeCCCceEEEEeCC
Confidence               55 78887889999999863

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0

Probab=100.00  E-value=3.9e-39  Score=294.24  Aligned_cols=281  Identities=18%  Similarity=0.243  Sum_probs=237.1

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      ..++|+|+.|++    .+++++.+.+++.+.+.  ....|+. .+..++|+++++++      ++++++|++|+|+++++
T Consensus        31 ~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~--~~~~y~~-~~~~~lr~~la~~~------~~~~~~v~~~~g~t~a~   97 (363)
T 3ffh_A           31 LTKITKLSSNEN----PLGTSKKVAAIQANSSV--ETEIYPD-GWASSLRKEVADFY------QLEEEELIFTAGVDELI   97 (363)
T ss_dssp             CSCCEECSSCSC----TTCCCHHHHHHHHTCBS--CCCBC-----CHHHHHHHHHHH------TCCGGGEEEESSHHHHH
T ss_pred             CCceEEccCCCC----CCCCCHHHHHHHHHHHH--HhhcCCC-cchHHHHHHHHHHh------CCChhhEEEeCCHHHHH
Confidence            568999999984    47789999999988764  3456754 68899999999999      46789999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~  193 (343)
                      ..++++++++||+|+++.|+|..+...++..|.+++.+++++  ++.+|+++++++++++++++++++|+||||.+++.+
T Consensus        98 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~~  175 (363)
T 3ffh_A           98 ELLTRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQ--DGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIELA  175 (363)
T ss_dssp             HHHHHHHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECCT--TSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHH
T ss_pred             HHHHHHHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCC--CCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcCHH
Confidence            999999999999999999999999999999999999998864  577999999999988999999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  273 (343)
                      ++.++++.|++ |+++|+|++|.++.+ +............+++++++|+||.|+++|+|+||++++        +++++
T Consensus       176 ~l~~l~~~~~~-~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~~~~  245 (363)
T 3ffh_A          176 DIQAFLDRVPS-DVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIAD--------KEIIR  245 (363)
T ss_dssp             HHHHHHTTSCT-TSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEEC--------HHHHH
T ss_pred             HHHHHHHhCCC-CcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecC--------HHHHH
Confidence            99999999888 999999999999887 433333344445678999999999999999999999984        47888


Q ss_pred             HHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +++.... .++++++.+.++ .++|.+. ++++ .+++++++++.+.+.|++++|+.+. +..|+|+|+++
T Consensus       246 ~l~~~~~-~~~~~~~~~~~~-~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~~~  312 (363)
T 3ffh_A          246 QLNIVRP-PFNTTSIGQKLA-IEAIKDQ-AFIGECRTSNANGIKQYEAFAKRFEKVKLY-PANGNFVLIDL  312 (363)
T ss_dssp             HHHHTCC-SCCCBHHHHHHH-HHHHHCH-HHHHHHHHHHHHHHHHHHHHHHHCTTCEEC-CCCSSEEEEEC
T ss_pred             HHHHhCC-CCCCCHHHHHHH-HHHhcCH-HHHHHHHHHHHHHHHHHHHHHhhCCCceEC-CCCCeEEEEEC
Confidence            8887765 567888888888 6667654 4554 8889999999999999986688874 55677888864

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*

Probab=100.00  E-value=5.8e-40  Score=303.40  Aligned_cols=310  Identities=21%  Similarity=0.308  Sum_probs=251.8

Q ss_pred             ccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCH
Q 019298            3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLP   80 (343)
Q Consensus         3 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~   80 (343)
                      +|+|.....++  .++.+....   .     ++++|||+.|.|+.  ...+++.+.+++.+++...  ....|++..|..
T Consensus        10 ~~~~~~~~~~~--~~~~~~~~~---~-----~~~~i~l~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~   77 (397)
T 2zyj_A           10 FGKGAGRIQAS--TIRELLKLT---Q-----RPGILSFAGGLPAP--ELFPKEEAAEAAARILREKGEVALQYSPTEGYA   77 (397)
T ss_dssp             SCGGGGGCCCC--HHHHHHHHH---T-----STTCEEESSCCCCG--GGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCH
T ss_pred             hhhhhcccCch--HHHHHHhhc---c-----CCCceecCCCCCCc--hhCCHHHHHHHHHHHHHhcchhhhCCCCCCCCH
Confidence            67888777766  555554421   1     45689999998762  2346788999998887642  235798878999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (343)
                      ++|+++++++      ++++++|++|+|+++++..++++++++||+|+++.|+|..+...++..|.+++.++.+++   +
T Consensus        78 ~l~~~la~~~------g~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~---~  148 (397)
T 2zyj_A           78 PLRAFVAEWI------GVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEE---G  148 (397)
T ss_dssp             HHHHHHHHHH------TSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT---E
T ss_pred             HHHHHHHHHh------CCChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCC---C
Confidence            9999999999      367889999999999999999999999999999999999999999999999999988642   3


Q ss_pred             CCHHHHHhhhcC-CceEE-EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC---C
Q 019298          161 VDLDDIESLADQ-NTVAL-VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST---V  235 (343)
Q Consensus       161 ~d~~~l~~~~~~-~~~~i-~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~---~  235 (343)
                      +|+++|++.+++ +++++ ++++|+||||.+++.+++++|+++|++||+++|+||+|..+.+++....++..++..   +
T Consensus       149 ~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~  228 (397)
T 2zyj_A          149 PDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYP  228 (397)
T ss_dssp             ECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCC
T ss_pred             CCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCC
Confidence            899999998875 77877 468999999999999999999999999999999999999998876544455445444   6


Q ss_pred             CEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhH-HHHH-HHHHHH
Q 019298          236 PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIM-QIMI-HGNFLE  312 (343)
Q Consensus       236 ~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~-~~l~-~~~~~~  312 (343)
                      ++++++|+||.|+ +|+|+||++++        ++++++++.... ...+.+++.+.++ ..+|.+.. ++++ .+++++
T Consensus       229 ~~i~~~s~sK~~~-~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~  298 (397)
T 2zyj_A          229 GVIYLGSFSKVLS-PGLRVAFAVAH--------PEALQKLVQAKQGADLHTPMLNQMLV-HELLKEGFSERLERVRRVYR  298 (397)
T ss_dssp             CEEEEEESTTTTC-GGGCCEEEECC--------HHHHHHHHHHHHHHHSSCCHHHHHHH-HHHHTTTHHHHHHHHHHHHH
T ss_pred             eEEEEeccccccc-ccceeEEEecC--------HHHHHHHHHHHHhhcCCCCHHHHHHH-HHHHHhCCHHHHHHHHHHHH
Confidence            8899999999999 99999999985        368888876543 2345688888887 66776532 3444 788889


Q ss_pred             HHHHHHHHhhcC-CC-CceeeCCCCceEeeecC
Q 019298          313 NFAGSCVPSYKL-IP-ELINFKSTGSSLKYLDL  343 (343)
Q Consensus       313 ~~~~~~~~~L~~-~~-g~~~~~~~~g~~~~~~l  343 (343)
                      ++++.+.+.|++ +| |+.+..|++|+|+|+++
T Consensus       299 ~~~~~l~~~L~~~~~~g~~~~~~~~g~~~~~~~  331 (397)
T 2zyj_A          299 EKAQAMLHALDREVPKEVRYTRPKGGMFVWMEL  331 (397)
T ss_dssp             HHHHHHHHHHHHHSCTTSEECCCSBSSEEEEEC
T ss_pred             HHHHHHHHHHHHHCCCCeEEccCCccEEEEEEc
Confidence            999999999987 67 68877889999999874

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*

Probab=100.00  E-value=2.3e-39  Score=299.79  Aligned_cols=323  Identities=16%  Similarity=0.226  Sum_probs=240.9

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCC
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE----KFNGYAPT   76 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~~   76 (343)
                      |+++.+..+.+++. ....+.........+ ..+.++|+|+.|+++    +++++.+.+++.++++..    ....|++.
T Consensus         1 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~   74 (400)
T 3asa_A            1 MKRNPHFVSLTKNY-LFADLQKRVAQFRLE-NPQHTVINLSIGDTT----QPLNASVAEAFASSIARLSSPTTCRGYGPD   74 (400)
T ss_dssp             CCCCHHHHTCCCCC-HHHHHHHHHHHHHHH-CTTSCCEECSSCCCC----CCCCHHHHHHHHHHHHHHTSSSCCCCCCCT
T ss_pred             CccchhhhccCCcc-cHHHHHHHHHHhhhh-cCCCceEeccCCCCC----CCCCHHHHHHHHHHHhcccccccccCCCCC
Confidence            45677777777652 233333333322211 236789999999853    667899999998887541    24579887


Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCce-eEEeecCC
Q 019298           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIE-VRHFDLLP  155 (343)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~-~~~~~~~~  155 (343)
                      .|.+++|+++++++.  +|. +++++|++|+|+++++..++. ++++||+|++++|+|..+...++..|.+ ++.+++++
T Consensus        75 ~g~~~lr~~la~~l~--~g~-~~~~~v~~~~G~~~al~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~  150 (400)
T 3asa_A           75 FGLPALRQKLSEDFY--RGF-VDAKEIFISDGAKVDLFRLLS-FFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQ  150 (400)
T ss_dssp             TCCHHHHHHHHHTTS--TTS-SCGGGEEEESCHHHHHHHHHH-HHCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCG
T ss_pred             CCCHHHHHHHHHHHH--cCC-CCHHHEEEccChHHHHHHHHH-HcCCCCEEEECCCCcHHHHHHHHHcCCcceEecccch
Confidence            899999999999974  343 678999999999999998765 4578999999999999999999999998 88888865


Q ss_pred             CCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-C
Q 019298          156 DKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-T  234 (343)
Q Consensus       156 ~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~  234 (343)
                      ++++..+++++     ++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++..+.++..++. .
T Consensus       151 ~~~~~~~l~~~-----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  225 (400)
T 3asa_A          151 ENAFFPEFPED-----THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDAR  225 (400)
T ss_dssp             GGTTCCCCCTT-----CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGG
T ss_pred             hcCcccChhhc-----cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCC
Confidence            44554554321     46889999999999999999999999999999999999999999998876543334444432 3


Q ss_pred             CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-h-ccccCcchHHHHHHHhccchhhHHHHHHHHHHH
Q 019298          235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-F-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLE  312 (343)
Q Consensus       235 ~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~  312 (343)
                      +++++++|+||.|+++|+|+||+++++......... ++.+... . ...++++.+.|.++ ..+|.+. .+-+.+++++
T Consensus       226 ~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~-~~~~~~~~~~  302 (400)
T 3asa_A          226 FCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHF-VIQDWERFLSTTFNGASIPAQEAG-VAGLSIL-PQLEAIHYYR  302 (400)
T ss_dssp             GTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCB-HHHHHHHHHHHHCCCCCHHHHHHH-HHHHHHT-TTCHHHHHHH
T ss_pred             CceEEEecchhhcCCcchheeEEeeChhhccchhhh-HHHHHHHHhccCccCCChHHHHHH-HHHhCcH-HHHHHHHHHH
Confidence            578999999999999999999999864210000000 3333221 2 12346788888888 5666543 2223888999


Q ss_pred             HHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298          313 NFAGSCVPSYKLIPELINFKSTGSSLKYLD  342 (343)
Q Consensus       313 ~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~  342 (343)
                      ++++.+.+.|+++ |+.+..+++|+|+|++
T Consensus       303 ~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~  331 (400)
T 3asa_A          303 ENSDLLRKALLAT-GFEVFGGEHAPYLWVK  331 (400)
T ss_dssp             HHHHHHHHHHHHT-TCEEEECSSSSEEEEE
T ss_pred             HHHHHHHHHHHHC-CCeeeCCCCceEEEEe
Confidence            9999999999988 8887778899999987

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}

Probab=100.00  E-value=1.8e-39  Score=296.65  Aligned_cols=281  Identities=15%  Similarity=0.152  Sum_probs=237.6

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      .+++|+|+.+++    .+++++.+++++.+++..  ...|++..+ .++|+++++++      ++++++|++|+|+++++
T Consensus        29 ~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~------~~~~~~v~~~~g~~~a~   95 (365)
T 3get_A           29 VKEVIKLASNEN----PFGTPPKAIECLRQNANK--AHLYPDDSM-IELKSTLAQKY------KVQNENIIIGAGSDQVI   95 (365)
T ss_dssp             CSCCEECSSCCC----TTCSCHHHHHHHHHHGGG--TTSCCCTTC-HHHHHHHHHHH------TCCGGGEEEESSHHHHH
T ss_pred             CCceEEecCCCC----CCCCCHHHHHHHHHHHHh--hccCCCCCh-HHHHHHHHHHh------CCCcceEEECCCHHHHH
Confidence            467899999984    477899999999998873  567888666 99999999999      46789999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~  193 (343)
                      ..++++++++||+|+++.|+|..+...++..|.+++.+++ .++++ +|+++++++++++++++++++|+||||.+++.+
T Consensus        96 ~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~  173 (365)
T 3get_A           96 EFAIHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQS-ITHNL-DEFKKLYETHKDEIKLIFLCLPNNPLGECLDAS  173 (365)
T ss_dssp             HHHHHHHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSS-SSCCH-HHHHHHHHHTTTTEEEEEEESSCTTTCCCCCHH
T ss_pred             HHHHHHHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEec-CCCCC-CCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCHH
Confidence            9999999999999999999999999999999999999987 34567 999999999998899999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCcccc--CCCC-CCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVF--GDKP-FVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK  270 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~--~~~~-~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~  270 (343)
                      ++.+++++| ++|+++|+|++|..+.+  .+.. ..........+++++++|+||.|+++|+|+||++++        ++
T Consensus       174 ~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~--------~~  244 (365)
T 3get_A          174 EATEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIAN--------AN  244 (365)
T ss_dssp             HHHHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEEC--------HH
T ss_pred             HHHHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcC--------HH
Confidence            999999999 57999999999998875  4332 222222344568899999999999999999999984        47


Q ss_pred             HHHHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          271 VVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       271 ~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +++.++.... .++++++.+.++ ..+|.+. ++++ .+++++++++.+.+.|+++ |+.+. +..|+|+|+++
T Consensus       245 ~~~~~~~~~~-~~~~~~~~~~~~-~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~-~~~~~~~~~~~  313 (365)
T 3get_A          245 IISAFYKLRA-PFNVSNLALKAA-VAAMDDD-EFTEKTLENNFSQMELYKEFAKKH-NIKII-DSYTNFITYFF  313 (365)
T ss_dssp             HHHHHHHHSC-TTCSCHHHHHHH-HHHHTCH-HHHHHHHHHHHHHHHHHHHHHHHT-TCEEC-CCSSSEEEEEC
T ss_pred             HHHHHHHhcC-CCCcCHHHHHHH-HHHhCCH-HHHHHHHHHHHHHHHHHHHHHHhC-CCEEC-CCCCeEEEEEC
Confidence            8888887765 356888888888 6777764 4444 8899999999999999988 88874 45567788864

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*

Probab=100.00  E-value=1.9e-40  Score=306.24  Aligned_cols=321  Identities=16%  Similarity=0.141  Sum_probs=249.8

Q ss_pred             CccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCC-CCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHH
Q 019298            5 NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTV-HSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR   83 (343)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr   83 (343)
                      ++..+.+++  ++..+...+.+..     +++.+||+.|.+.. ....++++.+.+++.+++.......|++..|.+++|
T Consensus         3 ~~~~~~~~~--~~~~~~~~~~~~~-----~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr   75 (394)
T 2ay1_A            3 GNLKPQAPD--KILALMGEFRADP-----RQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQ   75 (394)
T ss_dssp             GGCCCCCCC--SHHHHHHHHHHCC-----CTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHH
T ss_pred             ccCccCCCc--cHHHHHHHHHhCC-----CccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHH
Confidence            456677777  7888877776653     56789999999531 122467899999999887654566898888999999


Q ss_pred             HHHHHHHhhhCCCCCCCCcEEE--ecChHHHHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC
Q 019298           84 RAIAEYLSRDLPYKLTPNDVFV--TSGCTQAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW  159 (343)
Q Consensus        84 ~~ia~~~~~~~~~~~~~~~i~~--~~g~~~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  159 (343)
                      +++++++...   ++++++|++  |+|+++++..+++.+..  +||+|+++.|+|..+...++..|.+++.+++.+++++
T Consensus        76 ~~la~~~~~~---~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  152 (394)
T 2ay1_A           76 KAMGELILGD---GLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETR  152 (394)
T ss_dssp             HHHHHHHHGG---GCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTT
T ss_pred             HHHHHHHhCC---CCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCC
Confidence            9999998431   236789999  99999999999988754  9999999999999999999999999999988655667


Q ss_pred             CCCHHHHHhhhcCC---ceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC-CCCcccccC-CC
Q 019298          160 EVDLDDIESLADQN---TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK-PFVPMGVFG-ST  234 (343)
Q Consensus       160 ~~d~~~l~~~~~~~---~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~-~~~~~~~~~-~~  234 (343)
                      .+|++++++.+++.   +.++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++..+. ..
T Consensus       153 ~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~  232 (394)
T 2ay1_A          153 GVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRI  232 (394)
T ss_dssp             EECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHC
T ss_pred             ccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcC
Confidence            89999999988653   56677799999999999999999999999999999999999999887531 111222222 13


Q ss_pred             CCEEEEccCccccCCCCCcEEEEEE--eCCCCCCCchHH----HHHHhhhh-ccccCcchHHHHHHHhccchhh------
Q 019298          235 VPILTLGSLSKRWIVPGWRLGWFVT--TDPCGMFRKPKV----VERMKKYF-DILGDPATFIQVCIMYGCLSTI------  301 (343)
Q Consensus       235 ~~~i~~~S~sK~~~~~G~r~G~i~~--~~~~~~~~~~~~----~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~------  301 (343)
                      +++++++|+||.|+++|+|+||+++  ++       +++    .+.++... ..+..++++.+.++ ..+|++.      
T Consensus       233 ~~~i~~~s~sK~~~~~G~riG~~~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~l~~~~  304 (394)
T 2ay1_A          233 PEVLIAASCSKNFGIYRERTGCLLALCAD-------AATRELAQGAMAFLNRQTYSFPPFHGAKIV-STVLTTPELRADW  304 (394)
T ss_dssp             SSEEEEEECTTTTTCGGGCEEEEEEECSS-------HHHHHHHHHHHHHHHHTTTSSCCCHHHHHH-HHHHHSHHHHHHH
T ss_pred             CCEEEEEeccCCCcCcCCccceEEEEeCC-------HHHHHHHHHHHHHHHhhhcCCCChHHHHHH-HHHhcChHHHHHH
Confidence            4789999999999999999999987  33       233    33343222 22445588888877 6666653      


Q ss_pred             HHHHH-HHHHHHHHHHHHHHhhcCCC---CceeeCCCCceEeeecC
Q 019298          302 MQIMI-HGNFLENFAGSCVPSYKLIP---ELINFKSTGSSLKYLDL  343 (343)
Q Consensus       302 ~~~l~-~~~~~~~~~~~~~~~L~~~~---g~~~~~~~~g~~~~~~l  343 (343)
                      .++++ .+++++++++.+.+.|++++   ++.+..|++|+|+|+++
T Consensus       305 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~  350 (394)
T 2ay1_A          305 MAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGA  350 (394)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSSEEECCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCceEEEeeCC
Confidence            23343 88889999999999998763   47766788999999864

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}

Probab=100.00  E-value=2.1e-39  Score=295.01  Aligned_cols=282  Identities=16%  Similarity=0.258  Sum_probs=241.8

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      .++++|+|+.|+    +.+++++.+++++.+++.+  ...|+. .+.+++|+++++++      ++++++|++|+|++++
T Consensus        14 ~~~~~i~l~~~~----~~~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~i~~~~g~~~a   80 (354)
T 3ly1_A           14 STDNPIRINFNE----NPLGMSPKAQAAARDAVVK--ANRYAK-NEILMLGNKLAAHH------QVEAPSILLTAGSSEG   80 (354)
T ss_dssp             CSSSCEECSSCC----CSSCCCHHHHHHHHHTGGG--TTSCCH-HHHHHHHHHHHHHT------TSCGGGEEEESHHHHH
T ss_pred             CCCceEEccCCC----CCCCCCHHHHHHHHHHHhh--CcCCCC-CchHHHHHHHHHHh------CCChHHEEEeCChHHH
Confidence            377899999998    3477899999999998874  457854 57899999999998      4678999999999999


Q ss_pred             HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc--CCceEEEEeCCCCCccccc
Q 019298          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD--QNTVALVIINPGNPCGNVY  190 (343)
Q Consensus       113 l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--~~~~~i~~~~p~nptG~~~  190 (343)
                      +..++++++++||+|+++.|+|..+...++..|.+++.++.++  ++.+|+++|+++++  ++++++++++|+||||.++
T Consensus        81 ~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~  158 (354)
T 3ly1_A           81 IRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLD--NWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTIT  158 (354)
T ss_dssp             HHHHHHHHCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCC
T ss_pred             HHHHHHHHhCCCCeEEECCCCchHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCc
Confidence            9999999999999999999999999999999999999998763  47899999999998  7899999999999999999


Q ss_pred             CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC-CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCch
Q 019298          191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST-VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP  269 (343)
Q Consensus       191 ~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~-~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~  269 (343)
                      +.+++.+|+++| ++|+++|+|++|+.+.+++.....+...+.. +++++++|+||.|+++|+|+||++++        +
T Consensus       159 ~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~  229 (354)
T 3ly1_A          159 PADVIEPWIASK-PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAH--------P  229 (354)
T ss_dssp             CHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECC--------H
T ss_pred             CHHHHHHHHHhC-CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecC--------H
Confidence            999999999999 8999999999999988776544444334444 78999999999999999999999984        4


Q ss_pred             HHHHHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          270 KVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       270 ~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +++++++..... ++++++.+.++ .++|.+. .+++ .+++++++++.+.+.|+++ |+.+. +..|+|+|+++
T Consensus       230 ~~~~~~~~~~~~-~~~~~~~~~a~-~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~-~~~~~~~~~~~  299 (354)
T 3ly1_A          230 TVIALMGRYVAG-EKINFSGVDAA-LASMNDS-AFITYSKKSNDVSRQILLKALEDL-KLPYL-PSEGNFVFHQL  299 (354)
T ss_dssp             HHHHHHGGGTTC-SCCCHHHHHHH-HHHTTCH-HHHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCCSSEEEEEC
T ss_pred             HHHHHHHHhcCC-CCCCHHHHHHH-HHHhcCH-HHHHHHHHHHHHHHHHHHHHHHHC-CCeEC-CCCceEEEEEC
Confidence            788888877653 67888888888 6777765 4444 8899999999999999988 78764 55678899864

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0

Probab=100.00  E-value=1.2e-38  Score=291.41  Aligned_cols=280  Identities=18%  Similarity=0.288  Sum_probs=240.8

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCC-CCCcEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKL-TPNDVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~-~~~~i~~~~g~~~a  112 (343)
                      ++++|+|+.|+    +.+++++.+.+++.+++.......|++ .+..++|+++++++      ++ ++++|++|+|++++
T Consensus        29 ~~~~i~l~~~~----~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~------g~~~~~~i~~~~g~t~a   97 (367)
T 3euc_A           29 SHGLVKLDAME----NPYRLPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVM------QVPAGMEVLLGNGSDEI   97 (367)
T ss_dssp             CTTCEECCSSC----CCCCCCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHH------TCCTTCEEEEEEHHHHH
T ss_pred             CCCeeEccCCC----CCCCCCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHh------CCCCcceEEEcCCHHHH
Confidence            57889999998    447789999999999887544568877 58899999999998      34 67899999999999


Q ss_pred             HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccC
Q 019298          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYS  191 (343)
Q Consensus       113 l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~  191 (343)
                      +..++++++++||+|+++.|+|..+...++..|.+++.+++++  ++.+|++++++++++ +++++++++|+||||.+++
T Consensus        98 ~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~  175 (367)
T 3euc_A           98 ISMLALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRA--DFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFD  175 (367)
T ss_dssp             HHHHHHHTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCC
T ss_pred             HHHHHHHHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCC
Confidence            9999999999999999999999999999999999999998864  567999999999987 8999999999999999999


Q ss_pred             HHHHHHHHHHHhhc--CcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCch
Q 019298          192 YQHLQKLAETANKL--KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP  269 (343)
Q Consensus       192 ~~~l~~l~~~~~~~--~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~  269 (343)
                      .+++++|+++|++|  |+++|+|++|..+...+.    ...+...+++++++|+||. +++|+|+||++++        +
T Consensus       176 ~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~----~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~--------~  242 (367)
T 3euc_A          176 AADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESW----MSRLTDFGNLLVMRTVSKL-GLAGIRLGYVAGD--------P  242 (367)
T ss_dssp             HHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCS----GGGGGTCTTEEEEEECCCT-TSCSCCEEEEEEC--------H
T ss_pred             HHHHHHHHHhhhhcCCCcEEEEeCcchhhcccch----HHHHhhCCCEEEEecchhh-cccccCceeeeeC--------H
Confidence            99999999999999  999999999998763321    2233445688999999999 9999999999984        4


Q ss_pred             HHHHHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          270 KVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       270 ~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +++++++.... .++.+++.+.++ ..+|+. .++++ .+++++++++.+.+.|+++||+.+ .+.+|+|+|+++
T Consensus       243 ~~~~~~~~~~~-~~~~~~~~~~a~-~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~-~~~~~~~~~~~~  313 (367)
T 3euc_A          243 QWLEQLDKVRP-PYNVNVLTEATA-LFALEH-VAVLDEQAAQLRAERSRVAEGMAAHGGVTV-FPSAANFLLARV  313 (367)
T ss_dssp             HHHHHHGGGCC-SSCCCHHHHHHH-HHHHTT-HHHHHHHHHHHHHHHHHHHHHHHTSTTCEE-CCCSSSEEEEEC
T ss_pred             HHHHHHHHhCC-CCCCCHHHHHHH-HHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCcEE-CCCCCeEEEEEC
Confidence            78888877665 456888888888 677776 45554 889999999999999999989985 677888999864

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*

Probab=100.00  E-value=3.9e-38  Score=287.85  Aligned_cols=279  Identities=19%  Similarity=0.263  Sum_probs=231.0

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      ++++|||+.|.+    .+++++.+.+++.+++..  ...|++ .+..++|+++++++      ++++++|++|+|+++++
T Consensus        23 ~~~~idl~~~~~----~~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~v~~~~g~~~al   89 (364)
T 1lc5_A           23 PDQLLDFSANIN----PLGMPVSVKRALIDNLDC--IERYPD-ADYFHLHQALARHH------QVPASWILAGNGETESI   89 (364)
T ss_dssp             GGGSEECSSCCC----TTCCCHHHHHHHHHTGGG--GGSCCC-TTCHHHHHHHHHHH------TSCGGGEEEESSHHHHH
T ss_pred             ccceEEeccccC----CCCCCHHHHHHHHHHHHH--hhcCCC-CCHHHHHHHHHHHH------CcCHHHEEECCCHHHHH
Confidence            567899999984    356789999999998764  457876 58899999999999      46788999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~  193 (343)
                      ..+++++  +||+|+++.|+|..+...++..|.+++.++.+.++++.+ ++++.+.++++++++++++|+||||.+++.+
T Consensus        90 ~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~~~~~~v~i~~p~nptG~~~~~~  166 (364)
T 1lc5_A           90 FTVASGL--KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALTPDLDCLFLCTPNNPTGLLPERP  166 (364)
T ss_dssp             HHHHHHH--CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCCTTCCEEEEESSCTTTCCCCCHH
T ss_pred             HHHHHHc--CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhccCCCCEEEEeCCCCCCCCCCCHH
Confidence            9999998  679999999999999999999999999998865444444 5666666666788999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEE-EeCCCCCCCchHHH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV-TTDPCGMFRKPKVV  272 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~-~~~~~~~~~~~~~~  272 (343)
                      ++++|+++|++||+++|+||+|..+.+++...  +..++..+++++++|+||.|+++|+|+||++ ++        ++++
T Consensus       167 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~~~  236 (364)
T 1lc5_A          167 LLQAIADRCKSLNINLILDEAFIDFIPHETGF--IPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSD--------DAAM  236 (364)
T ss_dssp             HHHHHHHHHHHHTCEEEEECTTGGGSTTCCCS--GGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCC--------HHHH
T ss_pred             HHHHHHHHhhhcCcEEEEECcChhhccCccch--hhHhccCCCEEEEEECchhhcCCccceEEEEECC--------HHHH
Confidence            99999999999999999999999987753221  2223445688999999999999999999999 63        4788


Q ss_pred             HHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298          273 ERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD  342 (343)
Q Consensus       273 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~  342 (343)
                      ++++.... .++++++.+.++ ..+|+. ..+++ .+++++++++.+.+.|+++||+.+. +.+|+|+|++
T Consensus       237 ~~l~~~~~-~~~~~~~~~~~~-~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~g~~~~~~  303 (364)
T 1lc5_A          237 ARMRRQQM-PWSVNALAALAG-EVALQD-SAWQQATWHWLREEGARFYQALCQLPLLTVY-PGRANYLLLR  303 (364)
T ss_dssp             HHHHHHSC-TTCSCHHHHHHH-HHGGGC-HHHHHHHHHHHHHHHHHHHHHHHTSTTEEEC-CCSSSEEEEE
T ss_pred             HHHHHhCC-CCCCCHHHHHHH-HHHHhC-cHHHHHHHHHHHHHHHHHHHHHhcCCCCEEC-CCCCeEEEEE
Confidence            88877654 557788888888 777776 34555 8888999999999999988888874 5567788875

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*

Probab=100.00  E-value=1.7e-38  Score=289.49  Aligned_cols=272  Identities=20%  Similarity=0.282  Sum_probs=224.5

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~  114 (343)
                      .++|+|+.|++.    +++++.+      ++  ....+|++. +..++|+++++++      ++++++|++|+|+++++.
T Consensus        29 ~~~i~l~~~~~~----~~~~~~v------a~--~~~~~Y~~~-~~~~lr~~la~~~------~~~~~~v~~~~G~~~ai~   89 (356)
T 1fg7_A           29 NGDVWLNANEYP----TAVEFQL------TQ--QTLNRYPEC-QPKAVIENYAQYA------GVKPEQVLVSRGADEGIE   89 (356)
T ss_dssp             TCSEECSSCCCS----SCCCCCC------CC--CCTTSCCCS-SCHHHHHHHHHHH------TSCGGGEEEESHHHHHHH
T ss_pred             CceEEeeCCCCC----CCCCHhH------hh--hhhccCCCc-cHHHHHHHHHHHh------CCChHHEEEcCCHHHHHH
Confidence            468999999943    5555555      12  235689875 5899999999999      567899999999999999


Q ss_pred             HHHHHhcCCC-CeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298          115 VAMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       115 ~~~~~l~~~g-d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~  193 (343)
                      .++++++++| |+|+++.|+|..+...++..|.+++.++++  +++.+|+++++++++ +++++++++||||||.+++.+
T Consensus        90 ~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~  166 (356)
T 1fg7_A           90 LLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTL--DNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQ  166 (356)
T ss_dssp             HHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCC--TTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHH
T ss_pred             HHHHHHhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCC--CCCCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHH
Confidence            9999999999 999999999999999999999999988875  456799999999887 889999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccccc-CCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  272 (343)
                      ++++|+++|+ +|+++|+||+|.++..+    .++..+ +..+++++++|+||.|+++|+|+||++++        ++++
T Consensus       167 ~l~~l~~~~~-~~~~li~De~~~~~~~~----~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~~~  233 (356)
T 1fg7_A          167 DFRTLLELTR-GKAIVVADEAYIEFCPQ----ASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLAN--------EEVI  233 (356)
T ss_dssp             HHHHHHHHHT-TTCEEEEECTTGGGSGG----GCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEEC--------HHHH
T ss_pred             HHHHHHHhCC-CCCEEEEEccchhhcCC----CcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeC--------HHHH
Confidence            9999999999 99999999999987621    122222 44568999999999999999999999984        4788


Q ss_pred             HHHhhhhccccCcchHHHHHHHhccchhhH-HHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          273 ERMKKYFDILGDPATFIQVCIMYGCLSTIM-QIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       273 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~-~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +.++.... .+++++++|.++ .++|.+.. ++++ .+++++++++.+.+.|++++++....|.+|+|+|+++
T Consensus       234 ~~l~~~~~-~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~  304 (356)
T 1fg7_A          234 NLLMKVIA-PYPLSTPVADIA-AQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARF  304 (356)
T ss_dssp             HHHHHHSC-SSCSCHHHHHHH-HHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEE
T ss_pred             HHHHHhcC-CCCCCHHHHHHH-HHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeEEEEEC
Confidence            88887655 347888888888 67776532 2244 8889999999999999988665444677899999863

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0

Probab=100.00  E-value=1.1e-37  Score=284.15  Aligned_cols=277  Identities=17%  Similarity=0.280  Sum_probs=232.2

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      ++++|||+.|.+    .+++++.+.+++.+++..  ...|+. .+..++|+++++++      ++++++|++|+|+++++
T Consensus        25 ~~~~idl~~~~~----~~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~i~~~~g~t~al   91 (361)
T 3ftb_A           25 GRELLDYSSNIN----PLGIPKSFLNNIDEGIKN--LGVYPD-VNYRRLNKSIENYL------KLKDIGIVLGNGASEII   91 (361)
T ss_dssp             ---CEETTCCCC----TTCSCHHHHTTHHHHHHG--GGSCCC-TTCHHHHHHHHHHH------TCCSCEEEEESSHHHHH
T ss_pred             CCCEEEecCCCC----CCCCCHHHHHHHHHHHHH--hcCCCC-ccHHHHHHHHHHHh------CCCcceEEEcCCHHHHH
Confidence            678999999984    367889999999998875  356754 68899999999999      56789999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~  193 (343)
                      ..+++.+    |+|+++.|+|..+...++..|.+++.++++++.  .++++++++++++ ++++++++|+||||.+++.+
T Consensus        92 ~~~~~~~----d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~  164 (361)
T 3ftb_A           92 ELSISLF----EKILIIVPSYAEYEINAKKHGVSVVFSYLDENM--CIDYEDIISKIDD-VDSVIIGNPNNPNGGLINKE  164 (361)
T ss_dssp             HHHHTTC----SEEEEEESCCTHHHHHHHHTTCEEEEEECCTTS--CCCHHHHHHHTTT-CSEEEEETTBTTTTBCCCHH
T ss_pred             HHHHHHc----CcEEEecCChHHHHHHHHHcCCeEEEeecCccc--CCCHHHHHHhccC-CCEEEEeCCCCCCCCCCCHH
Confidence            9999887    899999999999999999999999999987543  4677999999987 99999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  273 (343)
                      ++++|+++|++||+++|+||+|.++.++ ............+++++++|+||.++++|+|+||+++.       ++++++
T Consensus       165 ~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~-------~~~~~~  236 (361)
T 3ftb_A          165 KFIHVLKLAEEKKKTIIIDEAFIEFTGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITN-------NKEIAA  236 (361)
T ss_dssp             HHHHHHHHHHHHTCEEEEECSSGGGTCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEES-------CHHHHH
T ss_pred             HHHHHHHHhhhcCCEEEEECcchhhcCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeC-------CHHHHH
Confidence            9999999999999999999999998876 33333333445578999999999999999999999843       257888


Q ss_pred             HHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCce-eeCCCCceEeeec
Q 019298          274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELI-NFKSTGSSLKYLD  342 (343)
Q Consensus       274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~-~~~~~~g~~~~~~  342 (343)
                      .++.... .++++++.+.++ .++|++ .++++ .+++++++++.+.+.|+++|++. +..+ .|.|+|++
T Consensus       237 ~~~~~~~-~~~~~~~~~~~~-~~~l~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~  303 (361)
T 3ftb_A          237 KIKAKQN-PWNINCFAEMAA-INCLKD-TNYIEESLLWIKKERKRFIEELNKIGFIKRVFSP-HANFVLCR  303 (361)
T ss_dssp             HHHTTSC-TTCSCHHHHHHH-HHTSSC-HHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECC-SSSEEEEE
T ss_pred             HHHhhCC-CCCCCHHHHHHH-HHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCCceecCC-CCeEEEEE
Confidence            8887665 457888888888 777776 45555 88999999999999999998888 6444 55677765

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}

Probab=100.00  E-value=6.8e-39  Score=297.92  Aligned_cols=321  Identities=20%  Similarity=0.224  Sum_probs=224.7

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCC
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE----KFNGYAPT   76 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~~   76 (343)
                      |.+|.++.+.... ..+..++..+.+...    ++++|+|++|.|..  ...+.+.+.+++++.+.+.    ....|+++
T Consensus         2 m~~s~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~i~l~~g~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~   74 (417)
T 3g7q_A            2 MTFSLFGDKFTRH-SGITRLMEDLNDGLR----TPGAIMLGGGNPAH--IPAMQDYFQTLLTDMVESGKAADALCNYDGP   74 (417)
T ss_dssp             ---------------CHHHHHHHHHC---------CCEECSCCCCCC--CHHHHHHHHHHHHHHHHHTHHHHHHHSTTCT
T ss_pred             Cchhhhhhhhhcc-ccHHHHHHHHHhhcc----CCCceEecCcCCCC--CChHHHHHHHHHHHHhhCCcccceeeccCCC
Confidence            6788888777653 356666666655432    57899999999762  1112367777777776543    12479998


Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCC-----eEEEe-CCCCcchHHHHHhc----Cc
Q 019298           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA-----NILLP-RPGFPIYELSAAFR----HI  146 (343)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd-----~vl~~-~p~~~~~~~~~~~~----g~  146 (343)
                      .|.++||+++++++.+.+|.++++++|++|+|+++++..++++++++||     +|+++ .|+|..+...+...    +.
T Consensus        75 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~  154 (417)
T 3g7q_A           75 QGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSA  154 (417)
T ss_dssp             TSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEEC
T ss_pred             CCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccc
Confidence            9999999999999998889899999999999999999999999999987     89997 99999887665322    22


Q ss_pred             eeEEeecCCC-CCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298          147 EVRHFDLLPD-KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (343)
Q Consensus       147 ~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~  225 (343)
                      .....++..+ .++.+|+++++  ++++++++++++||||||.+++.+++++|+++|++||+++|+||+|+.+..+. ..
T Consensus       155 ~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~-~~  231 (417)
T 3g7q_A          155 RPNIELLPEGQFKYHVDFEHLH--IGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGI-IF  231 (417)
T ss_dssp             CCEEEEEGGGEEEEECCGGGCC--CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCC-BC
T ss_pred             cCcccccCCcccccccCHHHhc--cccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccc-cc
Confidence            2222222221 24668999888  66788999999999999999999999999999999999999999998643211 11


Q ss_pred             CcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHH
Q 019298          226 VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQI  304 (343)
Q Consensus       226 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~  304 (343)
                      .... ....+++++++|||| ++++|+|+||++++        ++++++++.... ...+++++.+.++ .+++.+. .+
T Consensus       232 ~~~~-~~~~~~~i~~~s~sK-~~~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~-~~  299 (417)
T 3g7q_A          232 SEAR-PLWNPNIILCMSLSK-LGLPGSRCGIIIAN--------DKTITAIANMNGIISLAPGGMGPAMM-CEMIKRN-DL  299 (417)
T ss_dssp             SCCC-CCCCTTEEEEEESGG-GTCTTSCCEEEECC--------HHHHHHHHHHHHHHCCCCCSHHHHHH-HHHHHTT-CH
T ss_pred             cccc-cCCCCCEEEEEechh-ccCCCcceEEEEeC--------HHHHHHHHHhhcceeeCCCcHHHHHH-HHHHcCc-ch
Confidence            1110 122468999999999 69999999999884        478888877654 3456788888888 5555542 22


Q ss_pred             H----H-HHHHHHHHHHHHHHhhcC-CC--CceeeCCCCceEeeecC
Q 019298          305 M----I-HGNFLENFAGSCVPSYKL-IP--ELINFKSTGSSLKYLDL  343 (343)
Q Consensus       305 l----~-~~~~~~~~~~~~~~~L~~-~~--g~~~~~~~~g~~~~~~l  343 (343)
                      .    + .+++++++++.+.+.|.+ ++  |+.+..|++|+|+|+++
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~  346 (417)
T 3g7q_A          300 LRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWF  346 (417)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSSEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcceEEEEEc
Confidence            2    2 566788888888888876 55  46777899999999864

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}

Probab=100.00  E-value=1e-38  Score=299.23  Aligned_cols=323  Identities=21%  Similarity=0.247  Sum_probs=247.2

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhcccccccccee-EeccCCCCCCCCCCCcHHHHHHHHHHHhc-------CC---
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVI-SLAMGDPTVHSCFHTTHVATEAVAEALLS-------EK---   69 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~---   69 (343)
                      |++|+++.++.+.. ++..++....+...    .+++| +|+.|.|..  .....+.+.+++++.+.+       ..   
T Consensus         2 ~~~s~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~i~~l~~g~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (444)
T 3if2_A            2 MKFSKFGQKFTQPT-GISQLMDDLGDALK----SDQPVNMLGGGNPAK--IDAVNELFLETYKALGNDNDTGKANSSAII   74 (444)
T ss_dssp             CCCCHHHHHHHSCC-HHHHHHHHHHHHHH----SSSCCEECSCCCCCC--CHHHHHHHHHHHHHHHSCSCTTCCCCHHHH
T ss_pred             CCcchhhhhccCch-hHHHHHHHHHhhhc----CchhhhccCCCCCCc--ccchHHHHHHHHHHHHhccccccccchhhh
Confidence            88999999988753 57777776655543    46889 999999762  111225667777776654       21   


Q ss_pred             -CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCC--------------eEEEe-CCC
Q 019298           70 -FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA--------------NILLP-RPG  133 (343)
Q Consensus        70 -~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd--------------~vl~~-~p~  133 (343)
                       ...|++..|.+++|+++++++.+.+|.++++++|++|+|+++++..++++++++||              +|+++ .|+
T Consensus        75 ~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~  154 (444)
T 3if2_A           75 SMANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPE  154 (444)
T ss_dssp             HHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSC
T ss_pred             hhhccCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCC
Confidence             24799989999999999999999899999999999999999999999999998887              78776 999


Q ss_pred             CcchHHH------HHhcCceeEEeecCCCC---CCCCCHHHHHhh---hcCCceEEEEeCCCCCcccccCHHHHHHHHHH
Q 019298          134 FPIYELS------AAFRHIEVRHFDLLPDK---GWEVDLDDIESL---ADQNTVALVIINPGNPCGNVYSYQHLQKLAET  201 (343)
Q Consensus       134 ~~~~~~~------~~~~g~~~~~~~~~~~~---~~~~d~~~l~~~---~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~  201 (343)
                      |..+...      ....|..++.++.+.++   ++.+|+++|+++   ++++++++++++||||||.+++.+++++|+++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~  234 (444)
T 3if2_A          155 YIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEI  234 (444)
T ss_dssp             CGGGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred             ccchhhcccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHH
Confidence            9988763      34456777777765422   367999999998   67788999999999999999999999999999


Q ss_pred             HhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-
Q 019298          202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-  280 (343)
Q Consensus       202 ~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-  280 (343)
                      |++||+++|+||+|+.+.... ...... ....+++++++|+||. +++|+|+||++++        +++++.++.... 
T Consensus       235 a~~~~~~li~De~~~~~~~~~-~~~~~~-~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~--------~~l~~~~~~~~~~  303 (444)
T 3if2_A          235 AKRYDIPLIIDNAYGMPFPNI-IYSDAH-LNWDNNTILCFSLSKI-GLPGMRTGIIVAD--------AKVIEAVSAMNAV  303 (444)
T ss_dssp             HHHTTCCEEEECTTCTTTTCC-BCSCCC-CCCCTTEEEEEESTTT-TCGGGCCEEEECC--------HHHHHHHHHHHHH
T ss_pred             HHHCCCEEEEECCCCCccccc-cccccc-ccCCCCEEEEechhhc-cCCCCceEEEEEC--------HHHHHHHHHHHHh
Confidence            999999999999998643111 111110 1224678999999997 9999999999884        478888877654 


Q ss_pred             cccCcchHHHHHHHhccchhhHHHH----H-HHHHHHHHHHHHHHhhcC-CC--CceeeCCCCceEeeecC
Q 019298          281 ILGDPATFIQVCIMYGCLSTIMQIM----I-HGNFLENFAGSCVPSYKL-IP--ELINFKSTGSSLKYLDL  343 (343)
Q Consensus       281 ~~~~~~~~~~~a~~~~~l~~~~~~l----~-~~~~~~~~~~~~~~~L~~-~~--g~~~~~~~~g~~~~~~l  343 (343)
                      ...+++++.|.++ .+++... ++.    + .++.++++++.+.+.|.+ ++  ++.+..|++|+|+|+++
T Consensus       304 ~~~~~~~~~~~a~-~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~  372 (444)
T 3if2_A          304 VNLAPTRFGAAIA-TPLVAND-RIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWF  372 (444)
T ss_dssp             HHSSCCCHHHHHH-HHHHHTS-HHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEEEE
T ss_pred             ccCCCChHHHHHH-HHHHHcC-chhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEEEc
Confidence            3456788888887 5555542 222    2 566778888888877765 55  45677889999999863

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}

Probab=100.00  E-value=5.4e-39  Score=299.74  Aligned_cols=290  Identities=15%  Similarity=0.129  Sum_probs=230.2

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHH--HHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAV--AEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~  109 (343)
                      ....+||+.|.|+.. .++.++.+.+++  .+++...  ...+|++..|.++||+++++++      ++++++|++|+|+
T Consensus        32 ~~~~i~~~~G~p~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~------~~~~~~i~~t~G~  104 (427)
T 3ppl_A           32 KNLKLDLTRGKPSSE-QLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLL------GVPVEQVLAGDAS  104 (427)
T ss_dssp             TCCCEECCCCSCCHH-HHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHH------TSCGGGEEECSSC
T ss_pred             CCceEecCCCCCChH-HCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHh------CCCcceEEEeCCc
Confidence            567899999997621 122233566655  4444432  3578999899999999999999      5788999999999


Q ss_pred             HHHH--HHHHHHhcC--C----------CCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc-CCc
Q 019298          110 TQAI--DVAMALLSR--P----------GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-QNT  174 (343)
Q Consensus       110 ~~al--~~~~~~l~~--~----------gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~  174 (343)
                      ++++  ..+++++++  +          ||+|++++|+|..+...++..|.+++.++++.+   ++|+++|+++++ .++
T Consensus       105 ~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~  181 (427)
T 3ppl_A          105 SLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPMNED---GPDMDAVEELVKNPQV  181 (427)
T ss_dssp             HHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEEEEETT---EECHHHHHHHTTSTTE
T ss_pred             HHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCC---CCCHHHHHHHHhcCCC
Confidence            9999  588888876  6          899999999999999999999999999998653   499999999985 567


Q ss_pred             eEEEEe-CCCCCcccccCHHHHHHHHHHH-hhcCcEEEEccCCCccccCCCCCC--ccccc----CCCCCEEEEccCccc
Q 019298          175 VALVII-NPGNPCGNVYSYQHLQKLAETA-NKLKTLVIADEVYGHLVFGDKPFV--PMGVF----GSTVPILTLGSLSKR  246 (343)
Q Consensus       175 ~~i~~~-~p~nptG~~~~~~~l~~l~~~~-~~~~~~~i~D~ay~~~~~~~~~~~--~~~~~----~~~~~~i~~~S~sK~  246 (343)
                      ++++++ +||||||.+++.+++++|+++| ++||+++|+||+|..+.|++....  ++..+    +..+++++++||||+
T Consensus       182 ~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~  261 (427)
T 3ppl_A          182 KGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKI  261 (427)
T ss_dssp             EEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTT
T ss_pred             eEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhc
Confidence            777654 7799999999999999999999 999999999999999887764322  33322    245689999999999


Q ss_pred             cCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhh---HHHHH-HHHHHHHHHHHHHHh
Q 019298          247 WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTI---MQIMI-HGNFLENFAGSCVPS  321 (343)
Q Consensus       247 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~---~~~l~-~~~~~~~~~~~~~~~  321 (343)
                       +++|+|+||++++        +++++.++.... ...+++.+.|.++ ..++.+.   .++++ .++.++++++.+.+.
T Consensus       262 -~~~G~r~G~~~~~--------~~l~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~  331 (427)
T 3ppl_A          262 -TLAGAGVSFFLTS--------AENRKWYTGHAGIRGIGPNKVNQLAH-ARYFGDAEGVRAVMRKHAASLAPKFNKVLEI  331 (427)
T ss_dssp             -SCTTSSCEEEECC--------HHHHHHHHHHHHHHCSCCCHHHHHHH-HHHHCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -cCcCccEEEEEcC--------HHHHHHHHHHhhcccCCCCHHHHHHH-HHHHhChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence             8999999999985        468888877654 3567888999888 6666652   23333 778888888888777


Q ss_pred             hcC----CCCceeeCCCCceEeeecC
Q 019298          322 YKL----IPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       322 L~~----~~g~~~~~~~~g~~~~~~l  343 (343)
                      |.+    ++++.+..|++|+|+|+++
T Consensus       332 L~~~l~~~~~~~~~~p~~g~~~~~~~  357 (427)
T 3ppl_A          332 LDSRLAEYGVAQWTVPAGGYFISLDV  357 (427)
T ss_dssp             HHHHHGGGTCCEECCCSBSSCEEEEC
T ss_pred             HHHhcCCCCceEEeCCCccEEEEEEC
Confidence            754    3357777899999999875

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*

Probab=100.00  E-value=8.8e-42  Score=315.12  Aligned_cols=293  Identities=17%  Similarity=0.288  Sum_probs=246.5

Q ss_pred             ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHH
Q 019298           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV  115 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~  115 (343)
                      ++++|+.|+++    +++++.+.+++.+++... ...|++.  ..++|+++++++.+.+|..+++++|++|+|+++++..
T Consensus        32 ~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~  104 (392)
T 3b1d_A           32 QLLPAWIADMD----FEVMPEVKQAIHDYAEQL-VYGYTYA--SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISI  104 (392)
Confidence            78999999953    778899999999887643 4578764  7899999999998877877889999999999999999


Q ss_pred             HHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCC-CCCCCHHHHHhhhc-CCceEEEEeCCCCCcccccCHH
Q 019298          116 AMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK-GWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       116 ~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~~~l~~~~~-~~~~~i~~~~p~nptG~~~~~~  193 (343)
                      +++++.++||+|+++.|+|..+...++..|.+++.+++++++ +|.+|++++++.++ .+++++++++|+||||.+++.+
T Consensus       105 ~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~  184 (392)
T 3b1d_A          105 AIQAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWERE  184 (392)
Confidence            999999999999999999999999999899999888875333 46789999999887 5788889999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC--CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  271 (343)
                      ++++|+++|+++|+++|+||+|..+.+++....++..+..  .+++++++|+||.|+++|+|+||++++++       ++
T Consensus       185 ~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-------~~  257 (392)
T 3b1d_A          185 VLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENP-------TL  257 (392)
Confidence            9999999999999999999999999887655445544443  56889999999999999999999998642       36


Q ss_pred             HHHHhhhhccc--cCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcC-CCCceeeCCCCceEeeecC
Q 019298          272 VERMKKYFDIL--GDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKL-IPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       272 ~~~l~~~~~~~--~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~-~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++.++......  .++++++|.++ .++|.+...+++ .++.++++++.+.+.|++ +|++.+..+++++++|+++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~i~~  332 (392)
T 3b1d_A          258 CAQFKHQQLVNNHHEVSSLGYIAT-ETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGTYLIWLDF  332 (392)
Confidence            77776664432  35678888877 666665445555 888899999999999988 7888887899999999864

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}

Probab=100.00  E-value=1.4e-38  Score=296.64  Aligned_cols=288  Identities=17%  Similarity=0.146  Sum_probs=227.5

Q ss_pred             ceeEeccCCCCCCCCCCCcHHHHHHHHHHH--hcC-CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           36 KVISLAMGDPTVHSCFHTTHVATEAVAEAL--LSE-KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      .+|+|+.|.|+.. .+++++.+++++.+.+  ... ...+|+++.|.++||+++++++      ++++++|++|+|++++
T Consensus        33 ~~i~l~~g~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~------~~~~~~i~~t~G~~~a  105 (422)
T 3d6k_A           33 LSLDLTRGKPSAE-QLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEAL------GLPADLVVAQDGSSLN  105 (422)
T ss_dssp             CCEECCCCSCCHH-HHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHH------TCCGGGEEECSSCHHH
T ss_pred             CeEeCCCCCCChh-hCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHh------CCChhHEEEecchHHH
Confidence            4799999996411 1556667777776552  122 3568999999999999999999      5788999999999998


Q ss_pred             H--HHHHHHhcCC------------CCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEE
Q 019298          113 I--DVAMALLSRP------------GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVAL  177 (343)
Q Consensus       113 l--~~~~~~l~~~------------gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i  177 (343)
                      +  ..+++.+..+            +|+|++++|+|..+...++..|.+++.++++.+   ++|+++|++.+++ +++++
T Consensus       106 l~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~~~v  182 (422)
T 3d6k_A          106 IMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDE---GPDMGVVRELVKDPQVKGM  182 (422)
T ss_dssp             HHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHTSTTEEEE
T ss_pred             HHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCCC---CCCHHHHHHHHhcCCCeEE
Confidence            7  6777777655            357999999999999999999999999998652   3899999999875 67887


Q ss_pred             E-EeCCCCCcccccCHHHHHHHHHHHh-hcCcEEEEccCCCc--cccCCCCCCcccc----cCCCCCEEEEccCccccCC
Q 019298          178 V-IINPGNPCGNVYSYQHLQKLAETAN-KLKTLVIADEVYGH--LVFGDKPFVPMGV----FGSTVPILTLGSLSKRWIV  249 (343)
Q Consensus       178 ~-~~~p~nptG~~~~~~~l~~l~~~~~-~~~~~~i~D~ay~~--~~~~~~~~~~~~~----~~~~~~~i~~~S~sK~~~~  249 (343)
                      + +++||||||.+++.+++++|+++|+ ++|+++|+||+|..  +.+++....++..    .+..+++++++||||+ ++
T Consensus       183 ~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~  261 (422)
T 3d6k_A          183 WTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-TH  261 (422)
T ss_dssp             EECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SC
T ss_pred             EEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cC
Confidence            7 6899999999999999999999999 99999999999986  4433323333321    2345689999999999 89


Q ss_pred             CCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhh---HHHHH-HHHHHHHHHHHHHHhhcC
Q 019298          250 PGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTI---MQIMI-HGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       250 ~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~---~~~l~-~~~~~~~~~~~~~~~L~~  324 (343)
                      +|+|+||++++        +++++.+..... ..++++.++|.++ ..+|.+.   .++++ .++.++++++.+.+.|.+
T Consensus       262 ~GlriG~~~~~--------~~l~~~l~~~~~~~~~~~~~~~q~a~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~  332 (422)
T 3d6k_A          262 AGSGVSFFASS--------KENIEWYASHANVRGIGPNKLNQLAH-AQFFGDVAGLKAHMLKHAASLAPKFERVLEILDS  332 (422)
T ss_dssp             TTSSCEEEECC--------HHHHHHHHHHHHHHCSCCCHHHHHHH-HHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccceEEEEeC--------HHHHHHHHHHHHhhcCCCCHHHHHHH-HHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999985        478888887654 3467889999888 6777652   23444 778888888888877764


Q ss_pred             ----CCCceeeCCCCceEeeecC
Q 019298          325 ----IPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       325 ----~~g~~~~~~~~g~~~~~~l  343 (343)
                          ++++.+..|++|+|+|+++
T Consensus       333 ~l~~~~~~~~~~p~~g~~~~~~~  355 (422)
T 3d6k_A          333 RLSEYGVAKWTSPTGGYFISVDV  355 (422)
T ss_dssp             HHGGGTCEEECCCSBSSCEEEEE
T ss_pred             hcCcCCceEEeCCCcceEEEEEC
Confidence                3346667899999999864

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A

Probab=100.00  E-value=7.8e-37  Score=279.75  Aligned_cols=281  Identities=15%  Similarity=0.212  Sum_probs=231.9

Q ss_pred             eeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298           37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (343)
Q Consensus        37 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~  114 (343)
                      .|||+.|++    .+++++.+.+++.+++...  ....|++..+ .++|+++++++.+.+|.++++++|++|+|+++++.
T Consensus        32 ~idl~~~~~----~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~  106 (369)
T 3cq5_A           32 DIRLNTNEN----PYPPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWAANGSNEILQ  106 (369)
T ss_dssp             SEECSSCCC----CSCCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHH
T ss_pred             ceeccCCCC----CCCCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEECCChHHHHH
Confidence            499999984    3678899999999988642  2467887655 89999999999988888888999999999999999


Q ss_pred             HHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHH
Q 019298          115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       115 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~  193 (343)
                      .++++++++||+|++++|+|..+...++..|.+++.++.+  +++.+|++++++++++ +++++++++|+||||.+++.+
T Consensus       107 ~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~  184 (369)
T 3cq5_A          107 QLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRG--ADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLD  184 (369)
T ss_dssp             HHHHHHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECC--TTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHH
T ss_pred             HHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEecCC--cCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHH
Confidence            9999999999999999999999999999999999998864  4567999999999877 789999999999999999988


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCC-CEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV-PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~-~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  272 (343)
                      ++.++++.|   ++++|+||+|+.+.++   .......+..+ ++++++|+||.|+++|+|+||+++++        +++
T Consensus       185 ~l~~l~~~~---~~~li~De~~~~~~~~---~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~~  250 (369)
T 3cq5_A          185 DVERIINVA---PGIVIVDEAYAEFSPS---PSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANP--------AFI  250 (369)
T ss_dssp             HHHHHHHHC---SSEEEEECTTGGGCCS---CCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECT--------HHH
T ss_pred             HHHHHHHhC---CCEEEEECCchhhcCC---cchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCH--------HHH
Confidence            887777754   5999999999998753   11122224445 88999999999999999999999953        688


Q ss_pred             HHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          273 ERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       273 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++++.... .++++++.+.++ ..+|.+ .++++ .+++++++++.+.+.|++. |+.+. +.+|+|+|+++
T Consensus       251 ~~l~~~~~-~~~~~~~~~~a~-~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~  317 (369)
T 3cq5_A          251 DAVMLVRL-PYHLSALSQAAA-IVALRH-SADTLGTVEKLSVERVRVAARLEEL-GYAVV-PSESNFVFFGD  317 (369)
T ss_dssp             HHHHTTSC-TTCSCHHHHHHH-HHHHHT-HHHHHTHHHHHHHHHHHHHHHHHHH-TCEEE-CCSSSEEEEEC
T ss_pred             HHHHHcCC-CCCCCHHHHHHH-HHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhC-CCEEC-CCCCeEEEEEC
Confidence            88876654 346788888887 666665 34454 8889999999999999885 78875 56678888764

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*

Probab=100.00  E-value=1.9e-37  Score=296.70  Aligned_cols=306  Identities=16%  Similarity=0.229  Sum_probs=231.3

Q ss_pred             cHHHHHHHHHhhcccccccc----ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHH-
Q 019298           16 TIKGMLSLLMQSVDDEKNEK----KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL-   90 (343)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~----~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~-   90 (343)
                      .++..+..+.+.... ..+.    .+|+|++|.+.    + +++.+.+++.+.+.   ...|+++.|.+++|+++++++ 
T Consensus        82 ~~~~~~~~~~~~~~~-~~~~~~l~~~i~l~~g~~~----~-~~~~~~~al~~~~~---~~~Y~~~~g~~~lr~~ia~~~~  152 (546)
T 2zy4_A           82 GIEGRFERYIAENRD-QEGVRFLGKSLSYVRDQLG----L-DPAAFLHEMVDGIL---GCNYPVPPRMLNISEKIVRQYI  152 (546)
T ss_dssp             THHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHTSC----C-CHHHHHHHHHHHHH---TCSCCSSSSCCHHHHHHHHHHH
T ss_pred             cchhHHHHHHHhcCC-CCcchhHHhhhecccCCCC----C-CChHHHHHHHHhhh---cCCCCCCcCCHHHHHHHHHHHH
Confidence            456665555554421 0111    27899999853    4 45667777777664   258999889999999987765 


Q ss_pred             hhhCCCCC---CCCcEEEecChHHHHHHHHHH-----hcCCCCeEEEeCCCCcchHHHHHhc--CceeEEeecCCCCCCC
Q 019298           91 SRDLPYKL---TPNDVFVTSGCTQAIDVAMAL-----LSRPGANILLPRPGFPIYELSAAFR--HIEVRHFDLLPDKGWE  160 (343)
Q Consensus        91 ~~~~~~~~---~~~~i~~~~g~~~al~~~~~~-----l~~~gd~vl~~~p~~~~~~~~~~~~--g~~~~~~~~~~~~~~~  160 (343)
                      .++++..+   ++++|++|+|+++++..++++     ++++||+|++++|+|+.|...+...  |.+++.++++++++|.
T Consensus       153 ~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~  232 (546)
T 2zy4_A          153 IREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQ  232 (546)
T ss_dssp             HHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTB
T ss_pred             HHhccCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCC
Confidence            44443322   568999999999999999988     4789999999999999998876554  5788888887777788


Q ss_pred             CCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHH--hhcCcEEEEccCCCccccCCCCCCcccccCCCCCEE
Q 019298          161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA--NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPIL  238 (343)
Q Consensus       161 ~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~--~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i  238 (343)
                      +|+++|++.+..+++++++++||||||.+++.+++++|+++|  +++|+++|+||+|.++.++   ..++.... .+++|
T Consensus       233 ~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~---~~s~~~~~-~~~~i  308 (546)
T 2zy4_A          233 YPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD---FQSLFAIC-PENTL  308 (546)
T ss_dssp             CCHHHHGGGGSTTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT---CCCHHHHC-GGGEE
T ss_pred             CCHHHHHHhhCCCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc---CcCHHHhC-CCCEE
Confidence            999999998877889999999999999999999999999999  8899999999999998753   22232222 25899


Q ss_pred             EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-------------h------------------------cc
Q 019298          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-------------F------------------------DI  281 (343)
Q Consensus       239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-------------~------------------------~~  281 (343)
                      +++||||.||++|+|+||+++++.       ++++++.+.             .                        ..
T Consensus       309 ~~~S~SK~~g~~GlRiG~~~~~~~-------~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  381 (546)
T 2zy4_A          309 LVYSFSKYFGATGWRLGVVAAHQQ-------NVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNH  381 (546)
T ss_dssp             EEEESTTTTTCGGGCEEEEEEESS-------CHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGG
T ss_pred             EEEeCccccCCCCcceEEEEECCH-------HHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhc
Confidence            999999999999999999999753       145544210             0                        11


Q ss_pred             ccCcchHHHHHHH----hccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          282 LGDPATFIQVCIM----YGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       282 ~~~~~~~~~~a~~----~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ..+++.+.|.++.    .+++.+...+.+ .++.++++++.+.+.|. + ++.+..+++|+|+|+++
T Consensus       382 ~~~~s~~~Q~a~a~~a~~all~~~~~~~~~~r~~~~~r~~~l~~~L~-~-~~~~~~~~~~~~l~~~l  446 (546)
T 2zy4_A          382 TAGLSTPQQVQMALFSLFALMDEADEYKHTLKQLIRRRETTLYRELG-M-PPLRDENAVDYYTLIDL  446 (546)
T ss_dssp             GCSSCHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHGGGT-S-SCCCCTTBCCSEEEEEH
T ss_pred             cCCCCcHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcC-C-CcccCCCCeeEEEEEEH
Confidence            2356777776641    234444345555 88889999999999986 5 46666789999999863

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*

Probab=100.00  E-value=2.2e-37  Score=283.89  Aligned_cols=264  Identities=20%  Similarity=0.303  Sum_probs=224.0

Q ss_pred             HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH
Q 019298           60 AVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL  139 (343)
Q Consensus        60 ~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~  139 (343)
                      ++.+++... ...|++..|.++||+++++++.     ++++++|++|+|+++++..++++++++||+|+++.|+|..+..
T Consensus        47 ~~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~-----~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~  120 (375)
T 3op7_A           47 DFYKKLQGT-KLNYGWIEGSPAFKKSVSQLYT-----GVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYD  120 (375)
T ss_dssp             HHHHHHHTS-CCSSCCTTCCHHHHHHHHTTSS-----SCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHH
T ss_pred             HHHHHHhcC-CcCCCCCCChHHHHHHHHHHhc-----cCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHH
Confidence            444444443 3479988999999999999873     4678999999999999999999999999999999999999999


Q ss_pred             HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccc
Q 019298          140 SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV  219 (343)
Q Consensus       140 ~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~  219 (343)
                      .++..|.+++.++++.++++.+|+++++++++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|..+.
T Consensus       121 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~  200 (375)
T 3op7_A          121 IPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFS  200 (375)
T ss_dssp             HHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCS
T ss_pred             HHHHcCCEEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence            99999999999998776778899999999998899999999999999999999999999999999999999999999987


Q ss_pred             cCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccc
Q 019298          220 FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCL  298 (343)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l  298 (343)
                      ++  ....+.  ...+++++++||||.++++|+|+||++++        ++++++++..... ..+++++.+.++ ..+|
T Consensus       201 ~~--~~~~~~--~~~~~~i~~~s~sK~~~~~G~r~G~v~~~--------~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~l  267 (375)
T 3op7_A          201 EL--DVPSII--EVYDKGIAVNSLSKTYSLPGIRIGWVAAN--------HQVTDILRDYRDYTMICAGVFDDLVA-QLAL  267 (375)
T ss_dssp             SS--CCCCHH--HHCTTEEEEEESSSSSSCGGGCCEEEECC--------HHHHHHHTTTGGGTTSCCCHHHHHHH-HHHH
T ss_pred             cc--CCCchh--hhcCCEEEEeEChhhcCCcccceEEEEeC--------HHHHHHHHHHHhhhccCCCcHHHHHH-HHHH
Confidence            65  222222  22457899999999999999999999983        4788988877543 456678888777 5666


Q ss_pred             hhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298          299 STIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD  342 (343)
Q Consensus       299 ~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~  342 (343)
                      .....+++ .+++++++++.+.+.|+++|++.+..|++|+++|+.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~  312 (375)
T 3op7_A          268 AHYQEILERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVK  312 (375)
T ss_dssp             HTHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEE
T ss_pred             hccHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEE
Confidence            65555655 778889999999999998888988789999888875

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}

Probab=100.00  E-value=1.9e-37  Score=288.95  Aligned_cols=290  Identities=19%  Similarity=0.236  Sum_probs=228.3

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHH--HHHhcC-CCCCC-CCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVA--EALLSE-KFNGY-APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~Y-~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~  109 (343)
                      ....|||+.|.|+.. .++.++.+.+++.  +.+... ....| ++..|.++||+++++++      ++++++|++|+|+
T Consensus        24 ~~~~i~l~~g~p~~~-~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~------~~~~~~i~~t~G~   96 (423)
T 3ez1_A           24 RGLNLNMQRGQPADA-DFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYL------DVKAENVLVWNNS   96 (423)
T ss_dssp             HTCCEESCCCCCCHH-HHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHT------TSCGGGEEECSSC
T ss_pred             CCceEecCCCCCChH-hCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHh------CCChhhEEEeCCc
Confidence            456799999997621 1456677888775  444422 35689 88889999999999999      5788999999999


Q ss_pred             HHHHH--HHHHHhcC--C---------CCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhh--cCCc
Q 019298          110 TQAID--VAMALLSR--P---------GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA--DQNT  174 (343)
Q Consensus       110 ~~al~--~~~~~l~~--~---------gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~--~~~~  174 (343)
                      ++++.  .+++++++  +         ||+|+++.|+|..+...++..|.+++.++++.+   ++|+++|++++  ++++
T Consensus        97 ~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~~  173 (423)
T 3ez1_A           97 SLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD---GPDVDAVERLAGTDPSV  173 (423)
T ss_dssp             HHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHHSCTTE
T ss_pred             HHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCCCC---CCCHHHHHHHHhhCCCc
Confidence            99998  88888877  7         599999999999999999999999999998653   49999999999  4577


Q ss_pred             eEEEE-eCCCCCcccccCHHHHHHHHHHH-hhcCcEEEEccCCCccccCC-C--CCCccccc----CCCCCEEEEccCcc
Q 019298          175 VALVI-INPGNPCGNVYSYQHLQKLAETA-NKLKTLVIADEVYGHLVFGD-K--PFVPMGVF----GSTVPILTLGSLSK  245 (343)
Q Consensus       175 ~~i~~-~~p~nptG~~~~~~~l~~l~~~~-~~~~~~~i~D~ay~~~~~~~-~--~~~~~~~~----~~~~~~i~~~S~sK  245 (343)
                      +++++ ++||||||.+++.+++++|+++| ++||+++|+||+|..+.+.+ .  ...++..+    +..+++++++||||
T Consensus       174 ~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK  253 (423)
T 3ez1_A          174 KGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSK  253 (423)
T ss_dssp             EEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTT
T ss_pred             eEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchh
Confidence            88765 48899999999999999999999 99999999999999766554 2  22233222    34568999999999


Q ss_pred             ccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchh-h---HHHHH-HHHHHHHHHHHHH
Q 019298          246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLST-I---MQIMI-HGNFLENFAGSCV  319 (343)
Q Consensus       246 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~-~---~~~l~-~~~~~~~~~~~~~  319 (343)
                      . +++|+|+||++++        +++++.++.... ...+++.+.|.++ ..+|.+ .   .++++ .++.++++++.+.
T Consensus       254 ~-~~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~  323 (423)
T 3ez1_A          254 I-TFAGAGLGFVASS--------EDNIRWLSKYLGAQSIGPNKVEQARH-VKFLTEYPGGLEGLMRDHAAIIAPKFRAVD  323 (423)
T ss_dssp             T-SCSSSSCEEEEEC--------HHHHHHHHHHHHHSCSCCCHHHHHHH-HHHHHHSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             h-ccCCcceEEEEeC--------HHHHHHHHHHHhhhccCCCHHHHHHH-HHHHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence            9 7899999999985        368888887754 3567888888887 666654 1   23333 6677777777766


Q ss_pred             HhhcC----CC-CceeeCCCCceEeeecC
Q 019298          320 PSYKL----IP-ELINFKSTGSSLKYLDL  343 (343)
Q Consensus       320 ~~L~~----~~-g~~~~~~~~g~~~~~~l  343 (343)
                      +.|.+    ++ ++.+..|++|+|+|+++
T Consensus       324 ~~l~~~l~~~~~~~~~~~p~~g~~~~~~~  352 (423)
T 3ez1_A          324 EVLRAELGEGGEYATWTLPKGGYFISLDT  352 (423)
T ss_dssp             HHHHHHHTTTTSSEEECCCSBSSCEEEEE
T ss_pred             HHHHHhcCcCCCceEEeCCCccEEEEEEC
Confidence            66643    53 36777899999999864

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}

Probab=100.00  E-value=8.6e-37  Score=277.39  Aligned_cols=269  Identities=15%  Similarity=0.168  Sum_probs=219.9

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      ++++|||+.+.+    .+++++.+.+++.+++.  ....|+++.+ .++|+++++++      ++++++|++|+|+++++
T Consensus        14 g~~~id~~~~~~----~~~~~~~v~~a~~~~~~--~~~~y~~~~~-~~lr~~la~~~------~~~~~~i~~t~g~~~al   80 (350)
T 3fkd_A           14 SSEIVNFSTTVW----TDGDKDHLEKHLVENLN--CIRHYPEPDA-GTLRQMLAKRN------SVDNNAILVTNGPTAAF   80 (350)
T ss_dssp             --CCEECSCCSC----CCSCCHHHHHHHHHTGG--GGGSCCCTTC-HHHHHHHHHHT------TCCGGGEEEESHHHHHH
T ss_pred             cccEEEccCCCC----CCCCCHHHHHHHHHhHh--HHhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHHH
Confidence            578999999984    47788999999998873  3457888766 99999999998      56789999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeec-CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL-LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~  192 (343)
                      ..+++++.  ||+|+++.|+|..+...++..|.+++.+++ +..++  +++        ++++++++++|+||||.+++.
T Consensus        81 ~~~~~~l~--gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~~--------~~~~~v~i~~p~nptG~~~~~  148 (350)
T 3fkd_A           81 YQIAQAFR--GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGE--ADF--------SNMDFCWLCNPNNPDGRLLQR  148 (350)
T ss_dssp             HHHHHHTT--TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGG--SCC--------TTCSEEEEESSCTTTCCCCCH
T ss_pred             HHHHHHHC--CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCcccc--Ccc--------CCCCEEEEeCCCCCcCCCCCH
Confidence            99999987  999999999999999999999999999988 43333  333        468899999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  272 (343)
                      +++.+|++.|+++  ++|+||+|..+.+++...  ....+..+++++++|+||.|+++|+|+||++++        ++++
T Consensus       149 ~~l~~l~~~~~~~--~li~Dea~~~~~~~~~~~--~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~--------~~~~  216 (350)
T 3fkd_A          149 TEILRLLNDHPDT--TFVLDQSYVSFTTEEVIR--PADIKGRKNLVMVYSFSHAYGIPGLRIGYIVAN--------KDFM  216 (350)
T ss_dssp             HHHHHHHHHCTTS--EEEEECTTTTSCSSCCCC--GGGGTTCSSEEEEEESHHHHSCGGGCCEEEECC--------HHHH
T ss_pred             HHHHHHHHhCCCC--EEEEECchhhhccCcchh--hHHhhcCCCEEEEecCchhccCcchheEeEEeC--------HHHH
Confidence            9999999999876  999999999987765432  234455678999999999999999999999983        4788


Q ss_pred             HHHhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298          273 ERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD  342 (343)
Q Consensus       273 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~  342 (343)
                      ++++.... .++++++.+.++ ..+|.+...|.+..+++.++++.+.+.|+++||+.+ .+.+|+|+|++
T Consensus       217 ~~~~~~~~-~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~  283 (350)
T 3fkd_A          217 KRVAAFST-PWAVNALAIEAA-KFILIHPAQFTLPIRKWQRNTVDFITALNRLDGVEV-HPSGTTFFLLR  283 (350)
T ss_dssp             HHHHTTCC-TTCSCHHHHHHH-HHHHHCTTTTCCCHHHHHHHHHHHHHHHHHSTTEEE-CCCSSSEEEEE
T ss_pred             HHHHHhCC-CCCCCHHHHHHH-HHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEE-CCCCCcEEEEE
Confidence            88887765 457888888888 666665444555444444889999999998889887 45667777765

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}

Probab=100.00  E-value=5.3e-37  Score=293.35  Aligned_cols=291  Identities=20%  Similarity=0.273  Sum_probs=228.1

Q ss_pred             ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-CCCCCHHHHHHHHHHHhhh-CC-CCCC-CCcEEEecChHH
Q 019298           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA-PTAGLPLTRRAIAEYLSRD-LP-YKLT-PNDVFVTSGCTQ  111 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~~~~~-~~-~~~~-~~~i~~~~g~~~  111 (343)
                      .+++|+.|.|.    ++ ++.+.+++.+++..   ..|+ +..|.+++|+++++++.+. .+ ..+. +++|++|+|+++
T Consensus       104 ~~i~l~~g~~~----~~-~~~~v~a~~~~~~~---~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~  175 (533)
T 3f6t_A          104 DAVNYCHTELG----LN-RDKVVAEWVNGAVA---NNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTA  175 (533)
T ss_dssp             HHHHHHHHTTC----CC-HHHHHHHHHHHHHT---CSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHH
T ss_pred             hheeccCCCCC----cC-CcHHHHHHHHHHHh---CCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHH
Confidence            57899999865    43 56666666666653   2455 6789999999999999665 34 4444 479999999999


Q ss_pred             HHHHHHHH-----hcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCC--CCCCCCCHHHHHhhhcCCceEEEEeCCCC
Q 019298          112 AIDVAMAL-----LSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP--DKGWEVDLDDIESLADQNTVALVIINPGN  184 (343)
Q Consensus       112 al~~~~~~-----l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~d~~~l~~~~~~~~~~i~~~~p~n  184 (343)
                      ++..++.+     ++++||+|++++|+|..+...++..|.+++.++++.  ++++.+|+++|+++++++++++++++|+|
T Consensus       176 al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~N  255 (533)
T 3f6t_A          176 AIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTN  255 (533)
T ss_dssp             HHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCT
T ss_pred             HHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCCC
Confidence            99999998     789999999999999999998888999999988865  56788999999999988899999999999


Q ss_pred             CcccccCHHHHHHHHHHHh-hcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCC
Q 019298          185 PCGNVYSYQHLQKLAETAN-KLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPC  263 (343)
Q Consensus       185 ptG~~~~~~~l~~l~~~~~-~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~  263 (343)
                      |||.+++.+++++|+++|+ +||+++|+||+|+++.++..   ++.... .+++++++||||.||++|+|+||+++++..
T Consensus       256 PtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~---~~~~~~-~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~  331 (533)
T 3f6t_A          256 PTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFK---SIYSVV-PYNTMLVYSYSKLFGCTGWRLGVIALNEKN  331 (533)
T ss_dssp             TTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCC---CHHHHS-GGGEEEEEESHHHHTCGGGCEEEEEEESSC
T ss_pred             CCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCcc---CHhhcC-CCCEEEEecCcccCCCcccceEEEEECcHH
Confidence            9999999999999999999 68999999999999876532   222222 368999999999999999999999997642


Q ss_pred             CCCCchHHHHH--------------------------------Hhhhh-ccccCcchHHHHHHH---hccch------hh
Q 019298          264 GMFRKPKVVER--------------------------------MKKYF-DILGDPATFIQVCIM---YGCLS------TI  301 (343)
Q Consensus       264 ~~~~~~~~~~~--------------------------------l~~~~-~~~~~~~~~~~~a~~---~~~l~------~~  301 (343)
                      .+   ..+++.                                ++... ....+++.+.|.++.   ..+|.      ..
T Consensus       332 ~~---~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~  408 (533)
T 3f6t_A          332 VF---DDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSD  408 (533)
T ss_dssp             HH---HHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTB
T ss_pred             HH---HHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccch
Confidence            00   012221                                12232 234567777887731   23332      22


Q ss_pred             HHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          302 MQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       302 ~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ..+++ .+++++++++.+.+.|. + ++.+..|++|+|+|+++
T Consensus       409 ~~~~~~~~~~~~~r~~~l~~~L~-~-~~~~~~~~~g~~~~~~l  449 (533)
T 3f6t_A          409 DPYIDIARKLVSERYDQLHDAMQ-A-PKDETDTNTHYYSLIDI  449 (533)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHT-C-CCCCSTTBCCSEEEEEH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcC-C-CccccCCCceEEEEEeh
Confidence            34444 88999999999999998 6 67777899999999863

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}

Probab=100.00  E-value=2.5e-35  Score=266.15  Aligned_cols=268  Identities=18%  Similarity=0.203  Sum_probs=218.6

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      .++.|+|+.++    +.++++|.+++++.+....  .+.|+. .+.+++|+++++++      ++++++|++|+|+++++
T Consensus        15 ~~~~i~l~~n~----~~~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~lr~~la~~~------~~~~~~i~~t~G~~~~l   81 (337)
T 3p1t_A           15 AAQAVCLAFNE----NPEAVEPRVQAAIAAAAAR--INRYPF-DAEPRVMRKLAEHF------SCPEDNLMLVRGIDECF   81 (337)
T ss_dssp             CCCCEECSSCC----CCSCCCHHHHHHHHHHGGG--TTSCCT-THHHHHHHHHHHHH------TSCGGGEEEESHHHHHH
T ss_pred             CCCceEeeCCC----CCCCCCHHHHHHHHHhhhh--hccCCC-CchHHHHHHHHHHh------CcCHHHEEEeCCHHHHH
Confidence            66789999998    4478899999999998764  567864 68899999999999      56788999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~  193 (343)
                      ..+++.+  +||+|+++.|+|..+...++..|.+++.++++  +++.+|++++++.  .+++++++++|+||||.+++.+
T Consensus        82 ~~~~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~~~~  155 (337)
T 3p1t_A           82 DRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLT--DDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAG  155 (337)
T ss_dssp             HHHHHHS--TTSEEEEESSSCSHHHHHHTTSCCEEEEECBC--TTSSBCHHHHTTC--CTTEEEEEESSCTTTCCCCCHH
T ss_pred             HHHHHhc--CCCeEEEeCCCcHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHhh--cCCCEEEEeCCCCCCCCCCCHH
Confidence            9999887  89999999999999999999999999998875  3578999999886  3678999999999999999988


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  273 (343)
                      ++.++++   +++. +|+||+|+.+.+.+..  .   ....+++++++|+||.|+++|+|+||++++        +++++
T Consensus       156 ~l~~l~~---~~~~-~ivDea~~~~~~~~~~--~---~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~--------~~~~~  218 (337)
T 3p1t_A          156 ELDQLRQ---RAGK-LLIDETYVDYSSFRAR--G---LAYGENELVFRSFSKSYGLAGLRLGALFGP--------SELIA  218 (337)
T ss_dssp             HHHHHHH---HCSE-EEEECTTGGGSSCSSS--C---CCCBTTEEEEEESSSTTCCTTTCCEEEECC--------HHHHH
T ss_pred             HHHHHHH---hCCc-EEEECCChhhcccccc--c---cccCCCEEEEeeCchhccCcchheEEEEeC--------HHHHH
Confidence            7776654   6675 6669999987654322  1   123357899999999999999999999985        47888


Q ss_pred             HHhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeee
Q 019298          274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYL  341 (343)
Q Consensus       274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~  341 (343)
                      .++.... .++++.+.+.++ ..+|.+...+.+.++++.++++.+.+.|+++ |+.+..++++ |+|+
T Consensus       219 ~l~~~~~-~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~-~~~~  282 (337)
T 3p1t_A          219 AMKRKQW-FCNVGTLDLHAL-EAALDNDRAREAHIAKTLAQRRRVADALRGL-GYRVASSEAN-FVLV  282 (337)
T ss_dssp             HHHTTSC-TTCSCHHHHHHH-HHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBCCCSSS-EEEE
T ss_pred             HHHhhcC-CCCCCHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-cCEECCCCCe-EEEE
Confidence            8877654 456788888887 6777764445557778888899999999988 8887566555 5554

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*

Probab=100.00  E-value=8.8e-36  Score=269.21  Aligned_cols=269  Identities=17%  Similarity=0.241  Sum_probs=219.3

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~  114 (343)
                      .+.++|+.+.+    .+++++.+.+++.+++.......|+. .+..++|+++++++++.   .+++++|++|+|+++++.
T Consensus        19 ~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~lr~~la~~~~~~---~~~~~~v~~~~G~~~al~   90 (335)
T 1uu1_A           19 RDKTYLALNEN----PFPFPEDLVDEVFRRLNSDALRIYYD-SPDEELIEKILSYLDTD---FLSKNNVSVGNGADEIIY   90 (335)
T ss_dssp             CCSEEESSCCC----SSCCCHHHHHHHHHTCCGGGGGSCCC-SSCHHHHHHHHHHHTCS---SCCGGGEEEESSHHHHHH
T ss_pred             CcceECCCCCC----CCCCCHHHHHHHHHHhhhhhhhcCCC-CchHHHHHHHHHHcCCC---CCCHHHEEEcCChHHHHH
Confidence            46799999984    36778999999999874334567876 47999999999999532   367889999999999999


Q ss_pred             HHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298          115 VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (343)
Q Consensus       115 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~  194 (343)
                      .+++++   ||+|+++ |+|..+...++..|.+++.++++  +++.+|++++     ++++++++++||||||.+++.++
T Consensus        91 ~~~~~~---gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l-----~~~~~v~l~~p~nptG~~~~~~~  159 (335)
T 1uu1_A           91 VMMLMF---DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLT--KDLRIPEVNV-----GEGDVVFIPNPNNPTGHVFEREE  159 (335)
T ss_dssp             HHHHHS---SEEEECS-SSCHHHHHHHHHHTCEEEECCCC--TTSCCCCCCC-----CTTEEEEEESSCTTTCCCCCHHH
T ss_pred             HHHHHh---CCcEEEC-CCcHHHHHHHHHcCCeEEEeccC--CCCCCCHHHc-----CCCCEEEEeCCCCCCCCCCCHHH
Confidence            999988   8999999 99999999999999999988874  3467888777     46889999999999999999999


Q ss_pred             HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (343)
Q Consensus       195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~  274 (343)
                      +++++++|   | ++|+||+|.++..+  .  ....++..+++++++|+||.|+++|+|+||++++        ++++++
T Consensus       160 l~~l~~~~---~-~li~De~~~~~~~~--~--~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~~~~~  223 (335)
T 1uu1_A          160 IERILKTG---A-FVALDEAYYEFHGE--S--YVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVAS--------EKFIDA  223 (335)
T ss_dssp             HHHHHHTT---C-EEEEECTTHHHHCC--C--CGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEEC--------HHHHHH
T ss_pred             HHHHHHhC---C-EEEEECcchhhcch--h--HHHHhhhCCCEEEEecchhhcCCcccCeEEEEeC--------HHHHHH
Confidence            99999877   7 89999999987642  1  1222344568899999999999999999999984        468888


Q ss_pred             HhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          275 MKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       275 l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++.... .++++++.|.++ ..+|.+ .++++ .+++++++++.+.+.|+++ |+.+ .|.+|+|+|+++
T Consensus       224 l~~~~~-~~~~~~~~~~~~-~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~~~  288 (335)
T 1uu1_A          224 YNRVRL-PFNVSYVSQMFA-KVALDH-REIFEERTKFIVEERERMKSALREM-GYRI-TDSRGNFVFVFM  288 (335)
T ss_dssp             HHHHSC-TTCSCHHHHHHH-HHHHHT-HHHHHHHHHHHHHHHHHHHHHHHHH-TCCB-CCCCSSEEEEEC
T ss_pred             HHHhcC-CCCcCHHHHHHH-HHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHC-CcEE-cCCCCeEEEEEC
Confidence            877654 357888888888 667765 33444 8888999999999999887 7776 466788999864

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}

Probab=100.00  E-value=4.8e-35  Score=266.96  Aligned_cols=273  Identities=15%  Similarity=0.248  Sum_probs=221.1

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +.++|+|+.+++    .+++++.+.+++.+++...  ....|++. +..++|+++++++      ++++++|++|+|+++
T Consensus        25 ~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~~~~~~y~~~-~~~~lr~~la~~~------g~~~~~i~~t~g~~~   93 (360)
T 3hdo_A           25 IASWIKLNTNEN----PYPPSPEVVKAILEELGPDGAALRIYPSA-SSQKLREVAGELY------GFDPSWIIMANGSDE   93 (360)
T ss_dssp             CTTSEECSSCCC----SSCCCHHHHHHHHHHHTTTCGGGGSCCCS-SCHHHHHHHHHHH------TCCGGGEEEESSHHH
T ss_pred             ccceeeccCCCC----CCCCCHHHHHHHHHHHhcccchhhcCCCC-chHHHHHHHHHHh------CcCcceEEEcCCHHH
Confidence            567899999994    4788999999999998763  24578764 6799999999999      467899999999999


Q ss_pred             HHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccC
Q 019298          112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS  191 (343)
Q Consensus       112 al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~  191 (343)
                      ++..++++++++||+|+++.|+|..+...++..|.+++.++++.  ++.+  +++++.+  +++++++++|+||||.+++
T Consensus        94 al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~--~~l~~~~--~~~~v~i~~p~nptG~~~~  167 (360)
T 3hdo_A           94 VLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTG--DFRI--AGFPERY--EGKVFFLTTPNAPLGPSFP  167 (360)
T ss_dssp             HHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCT--TSSB--TTCCSSB--CSSEEEEESSCTTTCCCCC
T ss_pred             HHHHHHHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCC--CCCH--HHHHhhc--CCCEEEEeCCCCCCCCCcC
Confidence            99999999999999999999999999999999999999998753  3344  5554433  3568999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (343)
Q Consensus       192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  271 (343)
                      .+++.+|   |+++|+++|+||+|..+.  +....  ......+++++++|+||.|+++|+|+||++++        +++
T Consensus       168 ~~~l~~l---~~~~~~~li~De~~~~~~--~~~~~--~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~~  232 (360)
T 3hdo_A          168 LEYIDEL---ARRCAGMLVLDETYAEFA--ESNAL--ELVRRHENVVVTRTLSKSYSLAGMRIGLAIAR--------PEV  232 (360)
T ss_dssp             HHHHHHH---HHHBSSEEEEECTTGGGS--SCCCT--HHHHHCSSEEEEEESTTTTSCTTSCCEEEECC--------HHH
T ss_pred             HHHHHHH---HHHCCCEEEEECChHhhC--Ccchh--HHhccCCCEEEEecchHhhcCCccceeeEeeC--------HHH
Confidence            8766555   568899999999999863  22222  22234468899999999999999999999984        478


Q ss_pred             HHHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          272 VERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       272 ~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++.++.... .++++++.+.++ .++|.+ .++++ .+++++++++.+.+.|+++ |+.+ .+.+|.|+|+++
T Consensus       233 ~~~~~~~~~-~~~~~~~~~~a~-~~~l~~-~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~-~~~~~~~~~~~~  300 (360)
T 3hdo_A          233 IAALDKIRD-HYNLDRLAQAAC-VAALRD-QAYLSECCRRIRETREWFTTELRSI-GYDV-IPSQGNYLFATP  300 (360)
T ss_dssp             HHHHHHHSC-SCCSCHHHHHHH-HHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHT-TCEE-CCCSSSEEEEEC
T ss_pred             HHHHHHhCC-CCCCCHHHHHHH-HHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHC-CCEE-cCCCccEEEEEC
Confidence            888887765 467888888888 677776 34444 8899999999999999988 8887 456677888753

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*

Probab=100.00  E-value=6.2e-36  Score=275.83  Aligned_cols=274  Identities=18%  Similarity=0.183  Sum_probs=209.5

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHh--c-CCCCCCCCCCCC-----HHHHHHHHHHHhhhCCCCCCC-CcEE
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALL--S-EKFNGYAPTAGL-----PLTRRAIAEYLSRDLPYKLTP-NDVF  104 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~Y~~~~g~-----~~lr~~ia~~~~~~~~~~~~~-~~i~  104 (343)
                      +.++|+|+.|.|+    ++.++.+.+++.+...  . ....+|++..|.     ++||+++|++++ .+|..+.+ ++|+
T Consensus        21 ~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~i~   95 (391)
T 3bwn_A           21 SDFVVNLDHGDPT----AYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRYIV   95 (391)
T ss_dssp             TTSCEECSSCCCG----GGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSEEE
T ss_pred             CCCeeEcCCCCCC----CCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCeEE
Confidence            6678999999965    4445555555433221  1 134689999998     999999999998 46777777 5999


Q ss_pred             EecChHHHHHHHHHHhcCCCC----eEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEe
Q 019298          105 VTSGCTQAIDVAMALLSRPGA----NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVII  180 (343)
Q Consensus       105 ~~~g~~~al~~~~~~l~~~gd----~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~  180 (343)
                      +|+|+++++..++++++++||    +|++++|+|..|...++..|.+++.++++.+ +  ++        .+++++++++
T Consensus        96 ~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~--l~--------~~~~k~v~l~  164 (391)
T 3bwn_A           96 VGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAW-G--FD--------KKGPYIELVT  164 (391)
T ss_dssp             EEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEEST-T--CC--------CCSCEEEEEE
T ss_pred             EeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCHH-H--cC--------CCCCEEEEEC
Confidence            999999999999999999999    9999999999999999999999988887542 2  22        2468899999


Q ss_pred             CCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEe
Q 019298          181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT  260 (343)
Q Consensus       181 ~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~  260 (343)
                      +||||||.+++     +|++.+.++++++|+||+|..    + ...++..  ..+++|+++||||+|+++|+|+||++++
T Consensus       165 ~p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~----~-~~~~l~~--~~~~~i~~~S~SK~~g~~GlRiG~~~~~  232 (391)
T 3bwn_A          165 SPNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW----P-HYTPITR--RQDHDIMLFTFSKITGHAGSRIGWALVK  232 (391)
T ss_dssp             SSCTTTCCCCC-----CCC-----CCCEEEEECTTCS----T-TTSCCCC--CBCCSEEEEEHHHHHSCGGGCEEEEEEC
T ss_pred             CCCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC----C-CCCcccc--CCCCeEEEEechhhcCCCccceEEEEec
Confidence            99999999996     344422223399999999974    1 1122222  3468899999999999999999999973


Q ss_pred             CCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhh----------HHHHH-HHHHHHHHHHHHHHhhcCCCCc
Q 019298          261 DPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTI----------MQIMI-HGNFLENFAGSCVPSYKLIPEL  328 (343)
Q Consensus       261 ~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~----------~~~l~-~~~~~~~~~~~~~~~L~~~~g~  328 (343)
                      +       ++++++++.... ..++++.+.|.++ ..+|.+.          ..+++ .++.++++++.+.+.|+++||+
T Consensus       233 ~-------~~l~~~l~~~~~~~~~~~~~~~q~a~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  304 (391)
T 3bwn_A          233 D-------KEVAKKMVEYIIVNSIGVSKESQVRT-AKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAF  304 (391)
T ss_dssp             C-------HHHHHHHHHHHHHHHSSCCHHHHHHH-HHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSE
T ss_pred             C-------HHHHHHHHHHhcccccCCCHHHHHHH-HHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            2       468888887754 2467889999888 6777653          23454 8899999999999999988777


Q ss_pred             eeeCC-------------CCceEeeecC
Q 019298          329 INFKS-------------TGSSLKYLDL  343 (343)
Q Consensus       329 ~~~~~-------------~~g~~~~~~l  343 (343)
                      .+..|             ++|+|+|+++
T Consensus       305 ~~~~p~~~~~~f~~~~~~~~g~~~~~~~  332 (391)
T 3bwn_A          305 TLPKYPEAFCNYFGKSLESYPAFAWLGT  332 (391)
T ss_dssp             ECCCCCCEEETTTTEEECCCCSEEEEEE
T ss_pred             ccccCCccccccccccCCCcceEEEecC
Confidence            66443             4566899863

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*

Probab=100.00  E-value=1.1e-35  Score=277.01  Aligned_cols=273  Identities=15%  Similarity=0.136  Sum_probs=217.7

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCC--CCCCCC-C---CHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN--GYAPTA-G---LPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~Y~~~~-g---~~~lr~~ia~~~~~~~~~~~~~~~i~~~~  107 (343)
                      +..+|+|+.|+|+    +++++.+++++.+++......  .|++.. |   .++||+++++|++++.+..+++++|++|+
T Consensus        55 ~~~~i~l~~g~~~----~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~  130 (427)
T 2hox_A           55 QGCSADVASGDGL----FLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGV  130 (427)
T ss_dssp             TTCCEECCSCCCG----GGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEES
T ss_pred             CCceEEecCcCCC----CCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeC
Confidence            5678999999964    566777888888777432222  499887 8   99999999999988776668899999999


Q ss_pred             ChHHHHHHHHHHh--------cCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEE
Q 019298          108 GCTQAIDVAMALL--------SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVI  179 (343)
Q Consensus       108 g~~~al~~~~~~l--------~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~  179 (343)
                      |++++|..++.++        +++||.|++++|+|..+...++..|.+++.+        .+|++.|++.++++++++++
T Consensus       131 G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~~~~~k~v~l  202 (427)
T 2hox_A          131 GVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVW--------AGNAANYVNVSNPEQYIEMV  202 (427)
T ss_dssp             HHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEE--------EEEGGGGTTCSCGGGEEEEE
T ss_pred             CHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeeee--------cCCHHHHHHhhcCCceEEEE
Confidence            9999999999999        8999999999999999999999999887643        35788888888778899999


Q ss_pred             eCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298          180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT  259 (343)
Q Consensus       180 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~  259 (343)
                      ++||||||.+++ +.       ++  ++..+.|++|..      +..++..+. .+++|+++||||.|+++|+|+||+++
T Consensus       203 ~~p~NPtG~~~~-~~-------l~--~~~~i~d~~~~~------~~~s~~~~~-~~~~i~~~S~SK~~g~~G~RiG~~~~  265 (427)
T 2hox_A          203 TSPNNPEGLLRH-AV-------IK--GCKSIYDMVYYW------PHYTPIKYK-ADEDILLFTMSKFTGHSGSRFGWALI  265 (427)
T ss_dssp             ESSCTTTCCCCC-CS-------ST--TCEEEEECTTCS------TTTSCCCSC-BCCSEEEEEHHHHTSCGGGCCEEEEE
T ss_pred             cCCCCCcccccH-HH-------Hc--CCCEEEeecccC------CCCCccccC-CCceEEEEeChhcCCCCCceEEEEEE
Confidence            999999999999 42       22  556778877742      122333333 46889999999999999999999998


Q ss_pred             eCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHH-----------HHH-HHHHHHHHHHHHHHhhcCCC
Q 019298          260 TDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQ-----------IMI-HGNFLENFAGSCVPSYKLIP  326 (343)
Q Consensus       260 ~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~-----------~l~-~~~~~~~~~~~~~~~L~~~~  326 (343)
                      ++       ++++++++..... ..+++.+.|.++ ..+|.+..+           +++ .++.++++++.+.+.|++++
T Consensus       266 ~~-------~~l~~~l~~~~~~~~~~~~~~~q~a~-~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~  337 (427)
T 2hox_A          266 KD-------ESVYNNLLNYMTKNTEGTPRETQLRS-LKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSD  337 (427)
T ss_dssp             CC-------HHHHHHHHHHHHHHTSSCCHHHHHHH-HHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred             CC-------HHHHHHHHHHHHhcCCCCCHHHHHHH-HHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence            53       4788888887643 467889999888 677765433           332 77889999999999999876


Q ss_pred             Ccee--------------eCCCCceEeeecC
Q 019298          327 ELIN--------------FKSTGSSLKYLDL  343 (343)
Q Consensus       327 g~~~--------------~~~~~g~~~~~~l  343 (343)
                      |+.+              ..|++|+|+|+++
T Consensus       338 g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~  368 (427)
T 2hox_A          338 RFSYQELPQSEYCNYFRRMRPPSPSYAWVKC  368 (427)
T ss_dssp             SEECCCCCSCEEETTTTEEECCCCSEEEEEE
T ss_pred             CccccccccccccccccccCCCCceEEEEEC
Confidence            6653              3567899999864

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}

Probab=100.00  E-value=2.9e-32  Score=251.82  Aligned_cols=280  Identities=16%  Similarity=0.099  Sum_probs=216.0

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +.+.+||+.|.+   .++++++.+.+++.+++...  ....|.+..|..++++++++++.+.+|    .+++++|+|+++
T Consensus        42 g~~~idl~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~v~~~~ggt~  114 (398)
T 3a2b_A           42 GRRVLMFGSNSY---LGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVG----KEAAILFSTGFQ  114 (398)
T ss_dssp             TEEEEECSCSCT---TCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT----CSEEEEESSHHH
T ss_pred             CceEEEeecccc---cCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhC----CCcEEEECCHHH
Confidence            567899999985   13557899999999887642  233466667888888888888887665    369999999999


Q ss_pred             HHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC----CceEEEEeCCCCCcc
Q 019298          112 AIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----NTVALVIINPGNPCG  187 (343)
Q Consensus       112 al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~i~~~~p~nptG  187 (343)
                      ++..++++++++||.|+++.|+|..+...++..|.+++.++.       +|+++|++.+++    +++++++++|+||||
T Consensus       115 a~~~~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG  187 (398)
T 3a2b_A          115 SNLGPLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGH-------NNMEDLRAKLSRLPEDSAKLICTDGIFSMEG  187 (398)
T ss_dssp             HHHHHHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESBCTTTC
T ss_pred             HHHHHHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCC-------CCHHHHHHHHHhhccCCceEEEEeCCCCCCC
Confidence            999999999999999999999999999999999999988865       578999998876    688999999999999


Q ss_pred             cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCC-EEEEccCccccCCCCCcEEEEEEeCCCCCC
Q 019298          188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRWIVPGWRLGWFVTTDPCGMF  266 (343)
Q Consensus       188 ~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~-~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~  266 (343)
                      .+++   +++|.++|++||+++|+||+|+.+.++.........++..++ +++++|+||.|+.+|   ||++++      
T Consensus       188 ~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~------  255 (398)
T 3a2b_A          188 DIVN---LPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGD------  255 (398)
T ss_dssp             CBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEEC------
T ss_pred             CccC---HHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cEEEeC------
Confidence            9976   788888999999999999999987764322111111222234 599999999999888   999984      


Q ss_pred             CchHHHHHHhhh-hc-cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          267 RKPKVVERMKKY-FD-ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       267 ~~~~~~~~l~~~-~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                        +++++.++.. .. .....+...|.++...+|+...+..+.+++++++++.+.+.|+++ |+.+..++ |+|+|+++
T Consensus       256 --~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-g~~~~~~~  330 (398)
T 3a2b_A          256 --ADVIDFLKHNARSVMFSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLDH-GFDLGATE-SPILPIFI  330 (398)
T ss_dssp             --HHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHT-TCCBCSCC-SSEEEEEC
T ss_pred             --HHHHHHHHHhcccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHhc-CCCcCCCC-CCEEEEEc
Confidence              4688887764 22 233344455554324566543222248889999999999999988 88875655 68888764

>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3

Probab=99.97  E-value=5.8e-30  Score=237.67  Aligned_cols=267  Identities=14%  Similarity=0.203  Sum_probs=204.3

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC------CCCCCC--CCCCHHHHHHHHHHHhhhCCCCC-CCCcEEE
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK------FNGYAP--TAGLPLTRRAIAEYLSRDLPYKL-TPNDVFV  105 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~Y~~--~~g~~~lr~~ia~~~~~~~~~~~-~~~~i~~  105 (343)
                      ++.++|+.|.+.     +.++.+.+++.+++....      ...|++  ..+..++|+.++++++      . +++++++
T Consensus        27 ~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~------~~~~~~v~~   95 (420)
T 1t3i_A           27 HPLVYLDNAATS-----QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFIN------ARSPREIVY   95 (420)
T ss_dssp             EECEECBTTTCC-----CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTT------CSCGGGEEE
T ss_pred             CceEEecCCccC-----CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcC------CCCCCeEEE
Confidence            458999999853     467899999999886421      223543  3567889999999983      3 5789999


Q ss_pred             ecChHHHHHHHHHHh----cCCCCeEEEeCCCCcc----hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEE
Q 019298          106 TSGCTQAIDVAMALL----SRPGANILLPRPGFPI----YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL  177 (343)
Q Consensus       106 ~~g~~~al~~~~~~l----~~~gd~vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i  177 (343)
                      |+|+++++..+++++    .++||+|+++.|+|..    +...++..|.+++.++.+  .++.+|++++++++++++++|
T Consensus        96 ~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~v  173 (420)
T 1t3i_A           96 TRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLD--EQESFDLEHFKTLLSEKTKLV  173 (420)
T ss_dssp             ESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBC--TTSSBCHHHHHHHCCTTEEEE
T ss_pred             cCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccC--CCCCcCHHHHHHhhCCCceEE
Confidence            999999999999999    8999999999999998    556677789999988875  456799999999998889999


Q ss_pred             EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEE
Q 019298          178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF  257 (343)
Q Consensus       178 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i  257 (343)
                      ++++|+||||.+++   +++|.++|+++|+++|+|++|+.+...    ..+..+   +.+++++|+||.++.+|  +||+
T Consensus       174 ~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~----~~~~~~---~~di~~~s~sK~~~~~g--~G~~  241 (420)
T 1t3i_A          174 TVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHYP----LDVQLI---DCDWLVASGHKMCAPTG--IGFL  241 (420)
T ss_dssp             EEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTSC----CCHHHH---TCSEEEEEGGGTTSCTT--CEEE
T ss_pred             EEeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCcc----Cchhhc---CCCEEEEehhhhcCCCc--eEEE
Confidence            99999999999988   788889999999999999999864321    112222   35699999999988777  8999


Q ss_pred             EEeCCCCCCCchHHHHHHhhhhcc---------------------ccCcchHHHHHHHhccchhhHH--HHHHHHHHHHH
Q 019298          258 VTTDPCGMFRKPKVVERMKKYFDI---------------------LGDPATFIQVCIMYGCLSTIMQ--IMIHGNFLENF  314 (343)
Q Consensus       258 ~~~~~~~~~~~~~~~~~l~~~~~~---------------------~~~~~~~~~~a~~~~~l~~~~~--~l~~~~~~~~~  314 (343)
                      +++        ++++++++.....                     ..+.+.+.+.++...++.....  +-+.+++++++
T Consensus       242 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~  313 (420)
T 1t3i_A          242 YGK--------EEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVEL  313 (420)
T ss_dssp             EEC--------HHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred             EEc--------hHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            985        3677777654321                     1234556665542323332221  22378888999


Q ss_pred             HHHHHHhhcCCCCceeeCCC
Q 019298          315 AGSCVPSYKLIPELINFKST  334 (343)
Q Consensus       315 ~~~~~~~L~~~~g~~~~~~~  334 (343)
                      ++.+.+.|++++|+.+..+.
T Consensus       314 ~~~l~~~L~~~~g~~~~~~~  333 (420)
T 1t3i_A          314 THYLWQGLGQIPQLRLYGPN  333 (420)
T ss_dssp             HHHHHHHHHTCTTEEEESCC
T ss_pred             HHHHHHHHHhCCCeEEeCCC
Confidence            99999999998888876664

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*

Probab=99.97  E-value=5.8e-29  Score=228.52  Aligned_cols=273  Identities=12%  Similarity=0.088  Sum_probs=203.4

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc-CC---CCCC--CCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS-EK---FNGY--APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~Y--~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~  107 (343)
                      +..++||+.|.+   .++++++.+.+++.+++.. ..   ...|  +...+..++|++++++++      ++ + .++++
T Consensus        38 g~~~id~~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g------~~-~-~i~~~  106 (384)
T 1bs0_A           38 DRQYLNFSSNDY---LGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLG------YS-R-ALLFI  106 (384)
T ss_dssp             TEEEEECSCCCT---TSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT------CS-E-EEEES
T ss_pred             CceEEEeeccCc---cCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhC------CC-c-EEEeC
Confidence            567899999873   2345789999999998865 21   1233  334567899999999982      32 4 44444


Q ss_pred             ChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCC---ceEEEEeCCCC
Q 019298          108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN---TVALVIINPGN  184 (343)
Q Consensus       108 g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~---~~~i~~~~p~n  184 (343)
                      ++++++..+++++.++||.|+++.|+|..+...++..|.+++.++.       .|++++++.+++.   ++++++++|+|
T Consensus       107 sGt~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~v~~~~~~n  179 (384)
T 1bs0_A          107 SGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASPCPGQQMVVTEGVFS  179 (384)
T ss_dssp             CHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSCCSSCEEEEEESBCT
T ss_pred             CcHHHHHHHHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCC-------CCHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence            4589999999999999999999999999999999999999988863       4789999888653   67888899999


Q ss_pred             CcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCC
Q 019298          185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG  264 (343)
Q Consensus       185 ptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~  264 (343)
                      |||.+++   +++|.++|++||+++|+||+|+.+.++.........++. ...++++|+||.++.+|   ||++++    
T Consensus       180 ptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~di~~~s~sK~~~~~G---G~~~~~----  248 (384)
T 1bs0_A          180 MDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKV-KPELLVVTFGKGFGVSG---AAVLCS----  248 (384)
T ss_dssp             TTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTC-CCSEEEEESSSTTSSCC---EEEEEC----
T ss_pred             CCCCccC---HHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCC-CCcEEEeeccchhhccC---cEEEeC----
Confidence            9999988   678889999999999999999876543111111112221 23499999999999777   999984    


Q ss_pred             CCCchHHHHHHhhhh-c--cccCcchHHHHHHHhccchhhHH-HH-HHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEe
Q 019298          265 MFRKPKVVERMKKYF-D--ILGDPATFIQVCIMYGCLSTIMQ-IM-IHGNFLENFAGSCVPSYKLIPELINFKSTGSSLK  339 (343)
Q Consensus       265 ~~~~~~~~~~l~~~~-~--~~~~~~~~~~~a~~~~~l~~~~~-~l-~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~  339 (343)
                          ++++++++... .  ...+.+++.+.++ .++|+...+ +. +.+++++++++.+.+.|+++ |+.+. +.+|+++
T Consensus       249 ----~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~  321 (384)
T 1bs0_A          249 ----STVADYLLQFARHLIYSTSMPPAQAQAL-RASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFTLA-DSCSAIQ  321 (384)
T ss_dssp             ----HHHHHHHHHHCHHHHSSBCCCHHHHHHH-HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCEEC-SCCSSBC
T ss_pred             ----HHHHHHHHHhchhhhcCCCCCHHHHHHH-HHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc-CCccc-CCCCCEE
Confidence                36777776642 1  1235677777776 555654332 44 48888999999999999998 78764 4667777


Q ss_pred             eec
Q 019298          340 YLD  342 (343)
Q Consensus       340 ~~~  342 (343)
                      |++
T Consensus       322 ~~~  324 (384)
T 1bs0_A          322 PLI  324 (384)
T ss_dssp             CEE
T ss_pred             EEE
Confidence            765

>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*

Probab=99.97  E-value=2.9e-29  Score=232.18  Aligned_cols=244  Identities=15%  Similarity=0.054  Sum_probs=181.9

Q ss_pred             eEeccCCCCCCCCCCCcHHHHHHHHHHHh----cCCCCCCCCCCCCH---HHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298           38 ISLAMGDPTVHSCFHTTHVATEAVAEALL----SEKFNGYAPTAGLP---LTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        38 i~l~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~Y~~~~g~~---~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  110 (343)
                      .++++++|+    +..++.+.+++.++.+    ......|+. .|.+   +++++++++++        .+++++++|++
T Consensus        21 ~~~~~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~g--------~~~~i~~~~g~   87 (404)
T 1e5e_A           21 QFGAAIPPI----YQTSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLEK--------TEACVATSSGM   87 (404)
T ss_dssp             TTCCSSCCC----CCCSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHHT--------CSEEEEESSHH
T ss_pred             CCCCcCCCC----cCCCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHhC--------CCcEEEeCChH
Confidence            468888876    3444434333333332    223456877 5777   89999999983        24788888889


Q ss_pred             HHHHHHHHHhcCCCCeEEEeCCCCcchHH----HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCc
Q 019298          111 QAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC  186 (343)
Q Consensus       111 ~al~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~npt  186 (343)
                      +++..++++++++||+|+++.|+|..+..    .++..|.+++.++.+       |++++++.++++++++++++|+|||
T Consensus        88 ~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~t~~v~l~~p~Npt  160 (404)
T 1e5e_A           88 GAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-------IPGEVKKHMKPNTKIVYFETPANPT  160 (404)
T ss_dssp             HHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-------STTHHHHHCCTTEEEEEEESSCTTT
T ss_pred             HHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-------CHHHHHHhcCCCCcEEEEECCCCCC
Confidence            99999999999999999999999998888    678889999988763       6889999998889999999999999


Q ss_pred             ccccCHHHHHHHHHHHhh-cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE-EEEEEeCCCC
Q 019298          187 GNVYSYQHLQKLAETANK-LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCG  264 (343)
Q Consensus       187 G~~~~~~~l~~l~~~~~~-~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~i~~~~~~~  264 (343)
                      |.+++   +++|+++|++ +|+++|+|++|..+.+..    ++ .   .++++++.|+||.|+++|+|+ ||+++++   
T Consensus       161 G~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~~----~~-~---~~~di~~~S~sK~~~~~g~ri~G~~~~~~---  226 (404)
T 1e5e_A          161 LKIID---MERVCKDAHSQEGVLVIADNTFCSPMITN----PV-D---FGVDVVVHSATKYINGHTDVVAGLICGKA---  226 (404)
T ss_dssp             CCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTCC----GG-G---GTCSEEEEETTTTTTCSSCCCCEEEEECH---
T ss_pred             CcccC---HHHHHHHHHhhcCCEEEEECCCchhhhCC----cc-c---cCCEEEEEcCccccCCCCCCeEEEEEECH---
Confidence            99985   7888999999 999999999999876531    12 1   246799999999999999998 9999853   


Q ss_pred             CCCchHHHH-HHhhhhcc--ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC
Q 019298          265 MFRKPKVVE-RMKKYFDI--LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       265 ~~~~~~~~~-~l~~~~~~--~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~  324 (343)
                           ++++ +++.....  ....+++.+.++ ...|.....   +.++..++.+.+.+.|++
T Consensus       227 -----~~~~~~l~~~~~~~~g~~~~~~~~~~~-~~~l~~~~~---~~~~~~~~~~~l~~~l~~  280 (404)
T 1e5e_A          227 -----DLLQQIRMVGIKDITGSVISPHDAWLI-TRGLSTLNI---RMKAESENAMKVAEYLKS  280 (404)
T ss_dssp             -----HHHHHHHHTCCCCCCCCCCCHHHHHHH-HHHHTTHHH---HHHHHHHHHHHHHHHHHT
T ss_pred             -----HHHHHHHHHHHHhCCCCCCCHHHHHHH-HHhHhHHHH---HHHHHHHHHHHHHHHHHh
Confidence                 5666 77776543  245778877777 455543222   233334444444444443

>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*

Probab=99.97  E-value=8.2e-30  Score=235.49  Aligned_cols=274  Identities=15%  Similarity=0.161  Sum_probs=206.5

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCC------CCCCCCCHHHHHHHHHHHhhhCCCCC-CCCcEE
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--FNG------YAPTAGLPLTRRAIAEYLSRDLPYKL-TPNDVF  104 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------Y~~~~g~~~lr~~ia~~~~~~~~~~~-~~~~i~  104 (343)
                      +.+.++|+.+.+.     +.++.+.+++.+++....  .+.      |.+..+..++|+.++++++      . ++++|+
T Consensus        21 g~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~------~~~~~~v~   89 (406)
T 1kmj_A           21 GLPLAYLDSAASA-----QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFIN------ARSAEELV   89 (406)
T ss_dssp             TEECEECCTTTCC-----CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTT------CSCGGGEE
T ss_pred             CCceEEecCCccC-----CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcC------CCCCCeEE
Confidence            3468999999843     467899999999886531  111      1234566889999999983      3 578999


Q ss_pred             EecChHHHHHHHHHHh----cCCCCeEEEeCCCCcch----HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceE
Q 019298          105 VTSGCTQAIDVAMALL----SRPGANILLPRPGFPIY----ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA  176 (343)
Q Consensus       105 ~~~g~~~al~~~~~~l----~~~gd~vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~  176 (343)
                      +|+|+++++..+++++    .++||+|+++.|+|.+.    ...++..|.+++.++.+.  ++.+|+++|++++++++++
T Consensus        90 ~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~  167 (406)
T 1kmj_A           90 FVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPTLFDEKTRL  167 (406)
T ss_dssp             EESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCT--TSCBCGGGHHHHCCTTEEE
T ss_pred             EeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCC--CCCcCHHHHHHHhccCCeE
Confidence            9999999999999999    88999999999998754    344667799999888753  4678999999999888999


Q ss_pred             EEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEE
Q 019298          177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGW  256 (343)
Q Consensus       177 i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~  256 (343)
                      +++++|+||||.+++   +++|.++|++||+++|+|++|+.+..    ...+.   ..+.+++++|+||.|+.+|  +||
T Consensus       168 v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~~----~~~~~---~~~~d~~~~s~~K~~g~~G--~G~  235 (406)
T 1kmj_A          168 LAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMHH----PVDVQ---ALDCDFYVFSGHKLYGPTG--IGI  235 (406)
T ss_dssp             EEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTS----CCCHH---HHTCSEEEEEGGGTTSCTT--CEE
T ss_pred             EEEeCCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCCC----CCccc---ccCCCEEEEEchhccCCCC--cEE
Confidence            999999999999988   78888999999999999999986421    11121   1235699999999998888  899


Q ss_pred             EEEeCCCCCCCchHHHHHHhhhhc----------------------cccCcchHHHHHHHhccchhhH-HHH-HHHHHHH
Q 019298          257 FVTTDPCGMFRKPKVVERMKKYFD----------------------ILGDPATFIQVCIMYGCLSTIM-QIM-IHGNFLE  312 (343)
Q Consensus       257 i~~~~~~~~~~~~~~~~~l~~~~~----------------------~~~~~~~~~~~a~~~~~l~~~~-~~l-~~~~~~~  312 (343)
                      ++++        ++++++++....                      ...+.+.+.+.++..+++.... ..+ +.+++++
T Consensus       236 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~  307 (406)
T 1kmj_A          236 LYVK--------EALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQ  307 (406)
T ss_dssp             EEEC--------HHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             EEEe--------HHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence            9985        367777654321                      1123455556554234443221 122 3778888


Q ss_pred             HHHHHHHHhhcCCCCceeeCC--CCceEee
Q 019298          313 NFAGSCVPSYKLIPELINFKS--TGSSLKY  340 (343)
Q Consensus       313 ~~~~~~~~~L~~~~g~~~~~~--~~g~~~~  340 (343)
                      ++++.+.+.|+++||+.+..+  .++++.|
T Consensus       308 ~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~  337 (406)
T 1kmj_A          308 NLMHYALSQLESVPDLTLYGPQNRLGVIAF  337 (406)
T ss_dssp             HHHHHHHHHHTTSTTEEEESCTTCCSEEEE
T ss_pred             HHHHHHHHHHhcCCCeEEecCCCcCCEEEE
Confidence            999999999999889987777  6777665

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*

Probab=99.97  E-value=5.3e-30  Score=234.19  Aligned_cols=275  Identities=12%  Similarity=0.101  Sum_probs=198.8

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC--------CCCCCCCCCCHHHHHH-HHHHHhhhCCCCCCCCcEE
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--------FNGYAPTAGLPLTRRA-IAEYLSRDLPYKLTPNDVF  104 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~Y~~~~g~~~lr~~-ia~~~~~~~~~~~~~~~i~  104 (343)
                      +++.++|+.|.+.    .++++.+.+++.+.+....        ...|.+..+..++++. ++++++      .+  +|+
T Consensus         6 ~~~~i~ld~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~------~~--~v~   73 (371)
T 2e7j_A            6 TKDFINIDPLQTG----GKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLG------CD--VAR   73 (371)
T ss_dssp             --CCEECCHHHHT----CCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTT------SS--EEE
T ss_pred             CCCcEEecccccC----CCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcC------CC--EEE
Confidence            4467888887632    5678999999998775421        1234456788999999 999983      23  999


Q ss_pred             EecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc-----CCceEEEE
Q 019298          105 VTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-----QNTVALVI  179 (343)
Q Consensus       105 ~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-----~~~~~i~~  179 (343)
                      +++|+++++..++++++++||+|++++|+|..+...++..|.+++.++...+.++.+|+++|++.++     ++++++++
T Consensus        74 ~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~  153 (371)
T 2e7j_A           74 VTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALI  153 (371)
T ss_dssp             EESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEE
T ss_pred             EeCChHHHHHHHHHHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEE
Confidence            9999999999999999999999999999999999999999999999982222347799999999987     67889999


Q ss_pred             eCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298          180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT  259 (343)
Q Consensus       180 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~  259 (343)
                      ++|+||||.+++   +++|.++|+++|+++|+|++|+.+...    ..+..++   ..++++|+||+++.++ |+||+++
T Consensus       154 ~~~~nptG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~----~~~~~~~---~di~~~s~sK~~~~~~-~~G~~~~  222 (371)
T 2e7j_A          154 TYPDGNYGNLPD---VKKIAKVCSEYDVPLLVNGAYAIGRMP----VSLKEIG---ADFIVGSGHKSMAASG-PIGVMGM  222 (371)
T ss_dssp             ESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTTBTTBC----CCHHHHT---CSEEEEEHHHHSSCCS-SCEEEEE
T ss_pred             ECCCCCCcccCC---HHHHHHHHHHcCCeEEEECccccCCCC----CChhhcC---CCEEEecCCcCCCCCC-CcEEEEE
Confidence            999999999987   478888899999999999999985432    1222222   3499999999987654 9999999


Q ss_pred             eCCCCCCCchHHHHH-Hhhhhc--c------ccCcchHHHHHHHhccchhhHHHHHHHHHH--HHHHHHHHHhhcCCCCc
Q 019298          260 TDPCGMFRKPKVVER-MKKYFD--I------LGDPATFIQVCIMYGCLSTIMQIMIHGNFL--ENFAGSCVPSYKLIPEL  328 (343)
Q Consensus       260 ~~~~~~~~~~~~~~~-l~~~~~--~------~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~--~~~~~~~~~~L~~~~g~  328 (343)
                      ++        +++++ ++....  .      .+.++.....++ .+++.....  +.++++  +++++.+.+.|+++ |+
T Consensus       223 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~-~~  290 (371)
T 2e7j_A          223 KE--------EWAEIVLRRSEKYKNKEVELLGCTARGATIITL-MASFPHVRE--RIKRWDEEVEKARRFAAEMEKL-GI  290 (371)
T ss_dssp             CT--------TTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHH-HHHHHHHHH--HGGGHHHHHHHHHHHHHHHHHT-TC
T ss_pred             ec--------hhhhhhccccccCcccccccccCCcCHHHHHHH-HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHc-Cc
Confidence            65        23343 433321  1      233444444444 333332111  456677  88889999999888 88


Q ss_pred             eeeCCC--CceEeeecC
Q 019298          329 INFKST--GSSLKYLDL  343 (343)
Q Consensus       329 ~~~~~~--~g~~~~~~l  343 (343)
                      .+..+.  .+.++|+++
T Consensus       291 ~~~~~~~~~~~~~~~~~  307 (371)
T 2e7j_A          291 KQLGDNPHNHDLMFFHA  307 (371)
T ss_dssp             EEESSSSCCSSEEEEEC
T ss_pred             EEecCCCccCceEEEEC
Confidence            876664  466888764

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}

Probab=99.97  E-value=2.3e-29  Score=232.17  Aligned_cols=275  Identities=12%  Similarity=0.076  Sum_probs=199.0

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC----CCC--CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK----FNG--YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~  107 (343)
                      +.+++||+.+.|-   ++..++.+.+++.+++....    ...  |+...+..++++.++++++      . ++.+++++
T Consensus        42 g~~~id~~~~~~~---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~------~-~~~i~~~s  111 (399)
T 3tqx_A           42 EKEVLNFCANNYL---GLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLG------T-DDTILYSS  111 (399)
T ss_dssp             TEEEEECSSCCTT---SCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHT------C-SEEEEESC
T ss_pred             CeeEEEeeccCcc---cccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHC------C-CcEEEECc
Confidence            4678999999532   24568999999988876421    111  2222335788899998883      2 24555554


Q ss_pred             ChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeC
Q 019298          108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIIN  181 (343)
Q Consensus       108 g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~  181 (343)
                       +++++..++++++++||.|+++.|+|..+...++..|.+++.++.       .|++++++.+++      +++++++++
T Consensus       112 -Gt~a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~  183 (399)
T 3tqx_A          112 -CFDANGGLFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKN-------NAMGDLEAKLKEADEKGARFKLIATDG  183 (399)
T ss_dssp             -HHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECT-------TCTTHHHHHHHHHHTTTCSSEEEEEES
T ss_pred             -hHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCC-------CCHHHHHHHHHhhhccCCCceEEEEeC
Confidence             578999999999999999999999999999999999999988865       367788877765      788999999


Q ss_pred             CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC-CCCCEEEEccCccccCCCCCcEEEEEEe
Q 019298          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVTT  260 (343)
Q Consensus       182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~i~~~  260 (343)
                      |+||||.+++   +++|.++|++||+++|+||+|+...++..........+ ..+.+++++|+||+|+  |.+.||++++
T Consensus       184 ~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~  258 (399)
T 3tqx_A          184 VFSMDGIIAD---LKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSGH  258 (399)
T ss_dssp             EETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEEC
T ss_pred             CCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEcC
Confidence            9999999988   78889999999999999999974333322211122222 1245699999999988  4455999985


Q ss_pred             CCCCCCCchHHHHHHhhhhc---cccCcchHHHHHHHhccchhhHH-HHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCc
Q 019298          261 DPCGMFRKPKVVERMKKYFD---ILGDPATFIQVCIMYGCLSTIMQ-IMIHGNFLENFAGSCVPSYKLIPELINFKSTGS  336 (343)
Q Consensus       261 ~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~~l~~~~~-~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g  336 (343)
                              +++++.+.....   .....++..+.++ ...+....+ .-+.+++++++++.+.+.|+++ |+.+. +..|
T Consensus       259 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~  327 (399)
T 3tqx_A          259 --------KEIIEWLRNRSRPYLFSNTVAPVIVATS-LKVLELLKTEGPQLRKQLQENSRYFRAGMEKL-GFQLV-PGNH  327 (399)
T ss_dssp             --------HHHHHHHHHHCHHHHSSCCCCHHHHHHH-HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCSS
T ss_pred             --------HHHHHHHHHhCcceeccCCCcHHHHHHH-HHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCC
Confidence                    468887776521   1335566665555 555554313 2338899999999999999988 78875 4455


Q ss_pred             eEeeec
Q 019298          337 SLKYLD  342 (343)
Q Consensus       337 ~~~~~~  342 (343)
                      .|+|+.
T Consensus       328 ~~~~~~  333 (399)
T 3tqx_A          328 PIIPVM  333 (399)
T ss_dssp             SEEEEE
T ss_pred             CEEEEE
Confidence            667764

>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*

Probab=99.97  E-value=1.8e-29  Score=232.15  Aligned_cols=275  Identities=13%  Similarity=0.044  Sum_probs=202.6

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC-CC-----CCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-FN-----GYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~Y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~  107 (343)
                      ++.++|+.+.+     .+.++.+.+++.+++.... .+     .|+. ..+..++|+.+++++      ++++++|++|+
T Consensus        15 ~~~i~l~~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~------g~~~~~v~~~~   83 (390)
T 1elu_A           15 ANKTYFNFGGQ-----GILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETF------NVDPNTITITD   83 (390)
T ss_dssp             TTSEECCTTTC-----CCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHT------TSCGGGEEEES
T ss_pred             CCeEEecCCcc-----CCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHc------CCCHHHEEEeC
Confidence            45789988862     3456789999988876421 11     3443 356788999999998      45778999999


Q ss_pred             ChHHHHHHHHHHh-cCCCCeEEEeCCCCcchHHH----HHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCC
Q 019298          108 GCTQAIDVAMALL-SRPGANILLPRPGFPIYELS----AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP  182 (343)
Q Consensus       108 g~~~al~~~~~~l-~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p  182 (343)
                      |+++++..+++++ .++||+|+++.|+|..+...    ++..|.+++.++.++++++.+|+++|++.++++++++++++|
T Consensus        84 g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~  163 (390)
T 1elu_A           84 NVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHL  163 (390)
T ss_dssp             SHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESB
T ss_pred             ChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEecc
Confidence            9999999999999 79999999999999987643    466799999998764456789999999999888999999999


Q ss_pred             CCCcccccCHHHHHHHHHHHh----hcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEE
Q 019298          183 GNPCGNVYSYQHLQKLAETAN----KLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV  258 (343)
Q Consensus       183 ~nptG~~~~~~~l~~l~~~~~----~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~  258 (343)
                      +||||.+++   +++|.++|+    ++|+++|+|++|+...    ....   +...+.+++++|+||. ..+|.++||++
T Consensus       164 ~nptG~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~g~----~~~~---~~~~~~d~~~~s~~K~-~~~~~g~G~~~  232 (390)
T 1elu_A          164 LWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAGS----LPLD---FSRLEVDYYAFTGHKW-FAGPAGVGGLY  232 (390)
T ss_dssp             CTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBTT----BCCC---TTTSCCSEEEEESSST-TCCCTTCEEEE
T ss_pred             ccCCceecC---HHHHHHHHhhhhhhcCcEEEEEcccccCC----cCCC---hhhcCCCEEEcccccc-ccCCCceEEEE
Confidence            999999988   678888888    9999999999998522    1111   2223456999999994 34556799999


Q ss_pred             EeCCCCCCCchHHHHHHhhh----------------------hc-cccCcchHHHHHHHhccchhhH--H-HHHHHHHHH
Q 019298          259 TTDPCGMFRKPKVVERMKKY----------------------FD-ILGDPATFIQVCIMYGCLSTIM--Q-IMIHGNFLE  312 (343)
Q Consensus       259 ~~~~~~~~~~~~~~~~l~~~----------------------~~-~~~~~~~~~~~a~~~~~l~~~~--~-~l~~~~~~~  312 (343)
                      +++        +++++++..                      .. ..+.++...+.++ .+++....  . +-+.+++++
T Consensus       233 ~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~l~~~~~~~~~~~~~~  303 (390)
T 1elu_A          233 IHG--------DCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGL-LAALQLHQRQGTAEERYQAIC  303 (390)
T ss_dssp             ECT--------TTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHH-HHHHHHHHHHCCHHHHHHHHH
T ss_pred             ECH--------HhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHH-HHHHHHHHHcCCHHHHHHHHH
Confidence            964        344444321                      01 1234555666555 34443211  2 333888899


Q ss_pred             HHHHHHHHhhcCCCCceeeC---CCCceEee
Q 019298          313 NFAGSCVPSYKLIPELINFK---STGSSLKY  340 (343)
Q Consensus       313 ~~~~~~~~~L~~~~g~~~~~---~~~g~~~~  340 (343)
                      ++++.+.+.|++++|+.+..   ++++++.|
T Consensus       304 ~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~  334 (390)
T 1elu_A          304 QRSEFLWRGLNQLPHVHCLATSAPQAGLVSF  334 (390)
T ss_dssp             HHHHHHHHHHHHSTTEEESCSSCCSSSEEEE
T ss_pred             HHHHHHHHHHHhcCCcEEecCccccccEEEE
Confidence            99999999999888888764   35666555

>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}

Probab=99.96  E-value=1e-28  Score=226.79  Aligned_cols=263  Identities=16%  Similarity=0.088  Sum_probs=201.6

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEe
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP  130 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~  130 (343)
                      .+.++.+.+++.+.+.    +.|++.  ..++++++++++.+.+|.. +++++++|+|+++++..++++++++||+|+++
T Consensus        29 ~~~~~~v~~a~~~~~~----~~~~~~--~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~  101 (386)
T 2dr1_A           29 VACFPEVLEIMKVQMF----SHRSKE--YRKVHMDTVERLREFLEVE-KGEVLLVPSSGTGIMEASIRNGVSKGGKVLVT  101 (386)
T ss_dssp             CCCCHHHHHHTTSCCC----CTTSHH--HHHHHHHHHHHHHHHHTCS-SSEEEEESSCHHHHHHHHHHHHSCTTCEEEEE
T ss_pred             cCCcHHHHHHHhcccc----cccCHH--HHHHHHHHHHHHHHHhCCC-CCcEEEEeCChHHHHHHHHHHhhcCCCeEEEE
Confidence            3567888877766543    256542  3678888888887777654 46789999999999999999999999999999


Q ss_pred             CCCCcc--hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhh--cCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcC
Q 019298          131 RPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA--DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLK  206 (343)
Q Consensus       131 ~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~--~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~  206 (343)
                      +|+|.+  +...++..|.+++.++.+.  ++.+|+++|++++  .++++++++++|+||||.+.+   +++|.++|++||
T Consensus       102 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~  176 (386)
T 2dr1_A          102 IIGAFGKRYKEVVESNGRKAVVLEYEP--GKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNP---LPELAKVAKEHD  176 (386)
T ss_dssp             ESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHHTT
T ss_pred             cCCchhHHHHHHHHHhCCceEEEecCC--CCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCC---HHHHHHHHHHcC
Confidence            999988  8888888999999998764  4679999999998  457899999999999999965   788899999999


Q ss_pred             cEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHh----------
Q 019298          207 TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK----------  276 (343)
Q Consensus       207 ~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~----------  276 (343)
                      +++|+|++|+.+.+.    ..   +...+.+++++|+||.++.++ ++||+++++        +++++++          
T Consensus       177 ~~li~D~a~~~~~~~----~~---~~~~~~di~~~s~sK~~~~~~-g~G~~~~~~--------~~~~~~~~~~~~~~~~~  240 (386)
T 2dr1_A          177 KLVFVDAVSAMGGAD----IK---FDKWGLDVVFSSSQKAFGVPP-GLAIGAFSE--------RFLEIAEKMPERGWYFD  240 (386)
T ss_dssp             CEEEEECTTTBTTBC----CC---TTTTTCSEEEEETTSTTCCCS-SCEEEEECH--------HHHHHHTTCTTCCSTTC
T ss_pred             CeEEEEccccccCcc----cc---ccccCCcEEEEeccccccCCC-ceEEEEECH--------HHHHHHhcCCCCceEEe
Confidence            999999999975432    11   222345699999999988763 389999853        5666652          


Q ss_pred             ------hh---hccccCcchHHHHHHHhccchhhHH---HHHHHHHHHHHHHHHHHhhcCCCCceeeCCC---CceEeee
Q 019298          277 ------KY---FDILGDPATFIQVCIMYGCLSTIMQ---IMIHGNFLENFAGSCVPSYKLIPELINFKST---GSSLKYL  341 (343)
Q Consensus       277 ------~~---~~~~~~~~~~~~~a~~~~~l~~~~~---~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~---~g~~~~~  341 (343)
                            ..   ....++++...+.++ ..+|+....   +-+.+++++++++.+.+.|+++ |+.+..++   .+.++|+
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~  318 (386)
T 2dr1_A          241 IPLYVKYLKEKESTPSTPPMPQVFGI-NVALRIIEKMGGKEKWLEMYEKRAKMVREGVREI-GLDILAEPGHESPTITAV  318 (386)
T ss_dssp             HHHHHHHHHHHSSCSSCCCHHHHHHH-HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCTTCBCSSEEEE
T ss_pred             HHHHHHhhccCCCCCCCCCHHHHHHH-HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCeeCcCccccCCceEEE
Confidence                  11   122446777778777 566654333   2348888999999999999988 88876665   3777777


Q ss_pred             cC
Q 019298          342 DL  343 (343)
Q Consensus       342 ~l  343 (343)
                      ++
T Consensus       319 ~~  320 (386)
T 2dr1_A          319 LT  320 (386)
T ss_dssp             EC
T ss_pred             Ec
Confidence            53

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*

Probab=99.96  E-value=2.2e-28  Score=227.93  Aligned_cols=275  Identities=16%  Similarity=0.095  Sum_probs=201.2

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc-C-CCCCCCCCCCC----HHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS-E-KFNGYAPTAGL----PLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~Y~~~~g~----~~lr~~ia~~~~~~~~~~~~~~~i~~~~  107 (343)
                      ++++|||+.|++   .++..++.+.+++.+++.. + ....|....|.    .++++.++++++      .  ++.++++
T Consensus        63 g~~~id~~~~~~---lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g------~--~~~i~~~  131 (427)
T 2w8t_A           63 GKDTILLGTYNY---MGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYG------T--TGAIVFS  131 (427)
T ss_dssp             TEEEEECSCCCT---TCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHT------C--SEEEEES
T ss_pred             CceEEEEECccc---ccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhC------C--CceEEec
Confidence            567889999973   2345789999999998865 2 12233333343    778888888872      2  3566666


Q ss_pred             ChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC----CceEEEEeCCC
Q 019298          108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ----NTVALVIINPG  183 (343)
Q Consensus       108 g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~i~~~~p~  183 (343)
                      ++++++..++++++++||.|+++.|+|..+...++..|.+++.++.       .|+++|++.+++    ++++|++++++
T Consensus       132 sGs~a~~~al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~~~  204 (427)
T 2w8t_A          132 TGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRH-------NSVEDLDKRLGRLPKEPAKLVVLEGVY  204 (427)
T ss_dssp             CHHHHHHHHHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESEE
T ss_pred             CcHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeCC-------CCHHHHHHHHHhccCCCCeEEEEcCCC
Confidence            6777999999999999999999999999999999999999887753       589999998875    67899999999


Q ss_pred             CCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC-CCCCEEEEccCccccCCCCCcEEEEEEeCC
Q 019298          184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVTTDP  262 (343)
Q Consensus       184 nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~  262 (343)
                      ||||.+++   +++|.++|++||+++|+||+|..+.++.........++ ..+.+++++||||.++++|   ||++++. 
T Consensus       205 n~tG~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~~-  277 (427)
T 2w8t_A          205 SMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSNH-  277 (427)
T ss_dssp             TTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEECC-
T ss_pred             CCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CEEEeCH-
Confidence            99999987   78889999999999999999999877532211111122 1234799999999998777   9999853 


Q ss_pred             CCCCCchHHHHHHhhhh-c--cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCC-CceE
Q 019298          263 CGMFRKPKVVERMKKYF-D--ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKST-GSSL  338 (343)
Q Consensus       263 ~~~~~~~~~~~~l~~~~-~--~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~-~g~~  338 (343)
                             ++++.++... .  .+...++..++++ .++|+...+.-+.+++++++++.+.+.|+++ |+.+..+. .|.+
T Consensus       278 -------~l~~~l~~~~~~~~~~~~~~~~~~aa~-~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~  348 (427)
T 2w8t_A          278 -------PKFEAVRLACRPYIFTASLPPSVVATA-TTSIRKLMTAHEKRERLWSNARALHGGLKAM-GFRLGTETCDSAI  348 (427)
T ss_dssp             -------TTGGGGGGTCHHHHSSCCCCHHHHHHH-HHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH-TCEESCSSCCSSE
T ss_pred             -------HHHHHHHHhcccccccCCCCHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCCCE
Confidence                   3555555431 1  1334566555555 4555432222348889999999999999888 78865333 5677


Q ss_pred             eeec
Q 019298          339 KYLD  342 (343)
Q Consensus       339 ~~~~  342 (343)
                      +|+.
T Consensus       349 ~~~~  352 (427)
T 2w8t_A          349 VAVM  352 (427)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            7775

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}

Probab=99.96  E-value=4.6e-29  Score=228.40  Aligned_cols=279  Identities=15%  Similarity=0.088  Sum_probs=200.5

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSE--KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  110 (343)
                      +..++||+.+.+.  +.++ +++.+.+++.+++...  ....|+. .+..++++.+++++      ++ ++++++++|++
T Consensus        27 g~~~ld~~~~~~~--~~~g~~~~~v~~a~~~~~~~~~~~~~~y~~-~~~~~l~~~la~~~------g~-~~~v~~~~g~t   96 (375)
T 2eh6_A           27 GKEYLDFVSGIGV--NSLGHAYPKLTEALKEQVEKLLHVSNLYEN-PWQEELAHKLVKHF------WT-EGKVFFANSGT   96 (375)
T ss_dssp             CCEEEESSHHHHT--CTTCBSCHHHHHHHHHHHHHCSCCCTTBCC-HHHHHHHHHHHHTS------SS-CEEEEEESSHH
T ss_pred             CCEEEEcCCcccc--cccCCCCHHHHHHHHHHHHhccccCcccCC-HHHHHHHHHHHhhc------CC-CCeEEEeCchH
Confidence            6778999999864  2356 7899999999988642  2235743 56788999998886      33 48999999999


Q ss_pred             HHHHHHHHH---hc---CCC-CeEEEeCCCCcchHHHHHhcCceeE----EeecCCCCCCC----CCHHHHHhhhcCCce
Q 019298          111 QAIDVAMAL---LS---RPG-ANILLPRPGFPIYELSAAFRHIEVR----HFDLLPDKGWE----VDLDDIESLADQNTV  175 (343)
Q Consensus       111 ~al~~~~~~---l~---~~g-d~vl~~~p~~~~~~~~~~~~g~~~~----~~~~~~~~~~~----~d~~~l~~~~~~~~~  175 (343)
                      +++..+++.   +.   ++| |+|++++|+|+.+...+...+....    ..++.  .++.    .|+++|+++++++++
T Consensus        97 ~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~l~~~~~  174 (375)
T 2eh6_A           97 ESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLV--PGFSYAKLNDIDSVYKLLDEETA  174 (375)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCC--SSEEEECTTCHHHHHTTCCTTEE
T ss_pred             HHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCC--CCceeCCCchHHHHHHHhcCCeE
Confidence            999999875   35   778 9999999999887765554432211    00110  0111    489999999988889


Q ss_pred             EEEEeCCCCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE
Q 019298          176 ALVIINPGNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL  254 (343)
Q Consensus       176 ~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~  254 (343)
                      ++++++++||||.+ .+.+++++|.++|++||+++|+||+|.++...+.. ..+..++...+++   ||||.++ +|+|+
T Consensus       175 ~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~d~~---s~SK~~~-~g~~~  249 (375)
T 2eh6_A          175 GIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEF-YAYQHFNLKPDVI---ALAKGLG-GGVPI  249 (375)
T ss_dssp             EEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSEE---EECGGGG-TTSCC
T ss_pred             EEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcc-hhhhhcCCCCCEE---EEccccc-CCCCe
Confidence            99998899999999 56888999999999999999999999976544322 1223333222333   7889998 69999


Q ss_pred             EEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298          255 GWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKS  333 (343)
Q Consensus       255 G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~  333 (343)
                      ||+++++        +++++++... ...++.+++.+.++ .++|+...   +.+++++++++.+.+.|++++. .. .+
T Consensus       250 G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~---~~~~~~~~~~~~l~~~L~~~~~-~~-~~  315 (375)
T 2eh6_A          250 GAILARE--------EVAQSFTPGSHGSTFGGNPLACRAG-TVVVDEVE---KLLPHVREVGNYFKEKLKELGK-GK-VK  315 (375)
T ss_dssp             EEEEEEH--------HHHTTCCTTSCCCSSTTCHHHHHHH-HHHHHHHH---HHHHHHHHHHHHHHHHHHHTTS-SE-EE
T ss_pred             EEEEEcH--------HHHhhhcCCCCCCCCCCCHHHHHHH-HHHHHHHH---HHHHHHHHHHHHHHHHHHHHhc-CC-ce
Confidence            9999863        5666665431 22446677877777 45554322   5778888899999999988743 33 24


Q ss_pred             CCceEeeecC
Q 019298          334 TGSSLKYLDL  343 (343)
Q Consensus       334 ~~g~~~~~~l  343 (343)
                      ..|+|+|+++
T Consensus       316 ~~g~~~~~~~  325 (375)
T 2eh6_A          316 GRGLMLGLEL  325 (375)
T ss_dssp             EETTEEEEEC
T ss_pred             EEEEEEEEEE
Confidence            5678888764

>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1

Probab=99.96  E-value=1.5e-28  Score=223.35  Aligned_cols=279  Identities=13%  Similarity=0.041  Sum_probs=204.8

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      ++..++|+.+.+     .++++.+.+++.+++.     .|....|..++++++++++.+.+|  .++++|++|+|+++++
T Consensus        12 ~p~~i~l~~~~~-----~~~~~~v~~a~~~~~~-----~~~~~~g~~~~~~~~~~~l~~~~g--~~~~~v~~~~g~t~a~   79 (359)
T 1svv_A           12 KPKPYSFVNDYS-----VGMHPKILDLMARDNM-----TQHAGYGQDSHCAKAARLIGELLE--RPDADVHFISGGTQTN   79 (359)
T ss_dssp             ---CEECSCSCS-----SCCCHHHHHHHHHHTT-----CCCCSTTCSHHHHHHHHHHHHHHT--CTTSEEEEESCHHHHH
T ss_pred             CCeeEEecCCCc-----CCCCHHHHHHHHHHHh-----hccccccccHHHHHHHHHHHHHhC--CCCccEEEeCCchHHH
Confidence            456899998652     2578999999999865     466667778899999998887666  5678999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHH--HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCC-------ceEEEEeCCCC
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYEL--SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN-------TVALVIINPGN  184 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~-------~~~i~~~~p~n  184 (343)
                      ..+++.+.++||+|++++|+|..+..  .++..|.+++.++.+   ++.+|+++|++.++++       ++++++++| |
T Consensus        80 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~  155 (359)
T 1svv_A           80 LIACSLALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNT-T  155 (359)
T ss_dssp             HHHHHHHCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-C
T ss_pred             HHHHHHHhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-C
Confidence            99999999999999999999998877  478889999998863   5789999999988765       788999998 7


Q ss_pred             CcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC-CCCCEEEEccCccccCCCCCcEEEEEEeCCC
Q 019298          185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVTTDPC  263 (343)
Q Consensus       185 ptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~  263 (343)
                      |||.+++.+++++|+++|++||+++|+|++|..+.++..+. ....+. .....+++.|++|. +.+ .++|+++++.  
T Consensus       156 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~d~~~~s~~K~-g~~-~~~g~l~~~~--  230 (359)
T 1svv_A          156 EVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVN-DLTLADIARLTDMFYIGATKA-GGM-FGEALIILND--  230 (359)
T ss_dssp             TTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTC-CCCHHHHHHHCSEEEEECTTT-TCS-SCEEEEECSG--
T ss_pred             CCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCc-chhhhhhhhcCCEEEEecccC-CCC-CceEEEEEcc--
Confidence            99999999999999999999999999999995543222111 111000 00122788899998 332 4578888743  


Q ss_pred             CCCCchHHHHHHhhh---hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEee
Q 019298          264 GMFRKPKVVERMKKY---FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKY  340 (343)
Q Consensus       264 ~~~~~~~~~~~l~~~---~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~  340 (343)
                            +++++++..   .......+.....++ ..++.+ ..+.+.+++++++++.+.+.| +.+|+.+..|++++|+|
T Consensus       231 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~-~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~~~  301 (359)
T 1svv_A          231 ------ALKPNARHLIKQRGALMAKGWLLGIQF-EVLMKD-NLFFELGAHSNKMAAILKAGL-EACGIRLAWPSASNQLF  301 (359)
T ss_dssp             ------GGCTTHHHHHHHTTCCCTTTHHHHHHH-HHHTST-THHHHHHHHHHHHHHHHHHHH-HHTTCCBSSCCSSSEEC
T ss_pred             ------cHHHHHHHHHhcCCcccccchhhHHHH-HHHHhh-hhHHHHHHHHHHHHHHHHHHh-ccCCeEEccCCccceEE
Confidence                  344444432   111111121222222 334544 344458889999999999999 55688877789999999


Q ss_pred             ec
Q 019298          341 LD  342 (343)
Q Consensus       341 ~~  342 (343)
                      ++
T Consensus       302 ~~  303 (359)
T 1svv_A          302 PI  303 (359)
T ss_dssp             BE
T ss_pred             EE
Confidence            75

>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3

Probab=99.96  E-value=1e-28  Score=227.57  Aligned_cols=260  Identities=13%  Similarity=0.102  Sum_probs=201.0

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeEEE
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILL  129 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~vl~  129 (343)
                      .+.++.+.+++.+.+..    .|++.  ..++++++++++.+.+|.  +++ ++++|+|+++++..++++++++||+|++
T Consensus        43 ~~~~~~v~~a~~~~~~~----~~~~~--~~~~~~~~~~~la~~~g~--~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~  114 (393)
T 1vjo_A           43 SNAHPSVLQAMNVSPVG----HLDPA--FLALMDEIQSLLRYVWQT--ENPLTIAVSGTGTAAMEATIANAVEPGDVVLI  114 (393)
T ss_dssp             CCCCHHHHHHHSSCCCC----TTSHH--HHHHHHHHHHHHHHHHTC--CCSCEEEESSCHHHHHHHHHHHHCCTTCEEEE
T ss_pred             CCCCHHHHHHHhccccc----ccCHH--HHHHHHHHHHHHHHHhCC--CCCcEEEEeCchHHHHHHHHHhccCCCCEEEE
Confidence            45678888887775432    46542  457778888887776654  567 8999999999999999999999999999


Q ss_pred             eCCCCcc--hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcC
Q 019298          130 PRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLK  206 (343)
Q Consensus       130 ~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~  206 (343)
                      ++|+|..  +...++..|.+++.++++.  ++.+|+++|++.+++ +++++++++|+||||.+++   +++|.++|+++|
T Consensus       115 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~  189 (393)
T 1vjo_A          115 GVAGYFGNRLVDMAGRYGADVRTISKPW--GEVFSLEELRTALETHRPAILALVHAETSTGARQP---LEGVGELCREFG  189 (393)
T ss_dssp             EESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHHT
T ss_pred             EcCChhHHHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHhhCCceEEEEeccCCCcceecc---HHHHHHHHHHcC
Confidence            9999998  8888899999999998764  456999999999987 8899999999999999976   678889999999


Q ss_pred             cEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh----h---
Q 019298          207 TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY----F---  279 (343)
Q Consensus       207 ~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~----~---  279 (343)
                      +++|+|++|..   +.. +..   +...+.+++++|+||.++.+| |+||+++++        +++++++..    .   
T Consensus       190 ~~li~Dea~~~---g~~-~~~---~~~~~~di~~~s~sK~l~~~~-~~G~l~~~~--------~~~~~~~~~~~~~~~~~  253 (393)
T 1vjo_A          190 TLLLVDTVTSL---GGV-PIF---LDAWGVDLAYSCSQKGLGCSP-GASPFTMSS--------RAIEKLQRRRTKVANWY  253 (393)
T ss_dssp             CEEEEECTTTT---TTS-CCC---TTTTTCSEEECCSSSTTCSCS-SCEEEEECH--------HHHHHHHTCSSCCSCST
T ss_pred             CEEEEECCccc---cCc-CCc---ccccCccEEEEcCcccccCCC-ceEEEEECH--------HHHHHHhccCCCCCcee
Confidence            99999999993   211 111   223345699999999999888 999999953        677777432    0   


Q ss_pred             -------------cccc-CcchHHHHHHHhccchhh-HHHH-HHHHHHHHHHHHHHHhhcCCCCceeeCCCC---ceEee
Q 019298          280 -------------DILG-DPATFIQVCIMYGCLSTI-MQIM-IHGNFLENFAGSCVPSYKLIPELINFKSTG---SSLKY  340 (343)
Q Consensus       280 -------------~~~~-~~~~~~~~a~~~~~l~~~-~~~l-~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~---g~~~~  340 (343)
                                   .... +++...+.++ ..+|... ..++ +.+++++++++.+.+.|+++ |+.+..|++   +.++|
T Consensus       254 ~~~~~~~~~~~~~~~~~g~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~  331 (393)
T 1vjo_A          254 LDMNLLGKYWGSERVYHHTAPINLYYAL-REALRLIAQEGLANCWQRHQKNVEYLWERLEDI-GLSLHVEKEYRLPTLTT  331 (393)
T ss_dssp             TCHHHHHHHHSTTCCCCSCCCHHHHHHH-HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEE
T ss_pred             cCcHhhhhhhccCCCCCCCCCHHHHHHH-HHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc-CCcccCCccccCCcEEE
Confidence                         1122 6677778777 5666542 2223 38889999999999999988 888766654   34455


Q ss_pred             e
Q 019298          341 L  341 (343)
Q Consensus       341 ~  341 (343)
                      +
T Consensus       332 ~  332 (393)
T 1vjo_A          332 V  332 (393)
T ss_dssp             E
T ss_pred             E
Confidence            4

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4

Probab=99.96  E-value=1.1e-28  Score=228.05  Aligned_cols=275  Identities=13%  Similarity=0.069  Sum_probs=203.4

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc-CCC---CCCC--CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS-EKF---NGYA--PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT  106 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~Y~--~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~  106 (343)
                      ++..++||+.+.|-   ++..++.+.+++.+++.. ...   +.|+  ...+..++|+++++++      +++ +.++++
T Consensus        43 ~g~~~id~~~~~~~---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------g~~-~~i~~~  112 (401)
T 1fc4_A           43 DGSHVINFCANNYL---GLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL------GME-DAILYS  112 (401)
T ss_dssp             TSCEEEECCCSCTT---SCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH------TCS-EEEEES
T ss_pred             CCccEEEeeccCcc---cccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHh------CCC-cEEEeC
Confidence            36788999999531   123589999999988764 211   1222  1346788999999998      333 555555


Q ss_pred             cChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEe
Q 019298          107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVII  180 (343)
Q Consensus       107 ~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~  180 (343)
                       ++++++..++++++++||.|+++.|+|..+...++..|.+++.++.       .|++++++.+++      ++++++++
T Consensus       113 -sGs~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~  184 (401)
T 1fc4_A          113 -SCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARHVLIATD  184 (401)
T ss_dssp             -CHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSEEEEEE
T ss_pred             -ChHHHHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEECC-------CCHHHHHHHHHHhhccCCCceEEEEe
Confidence             4577999999999999999999999998888888889999888752       478899888764      68899999


Q ss_pred             CCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCC-cccc-CCCCCCcccccCCCCCEEEEccCcccc-CCCCCcEEEE
Q 019298          181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG-HLVF-GDKPFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWF  257 (343)
Q Consensus       181 ~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~-~~~~-~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~i  257 (343)
                      +|+||||.+++   +++|.++|+++|+++|+||+|+ ++.+ .+........+.. +.+++++|+||.| ++.|   ||+
T Consensus       185 ~~~nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~-~~di~~~s~sK~~~~~~g---G~~  257 (401)
T 1fc4_A          185 GVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMG-RVDIITGTLGKALGGASG---GYT  257 (401)
T ss_dssp             SEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTT-CCSEEEEESSSTTCSSSC---EEE
T ss_pred             CCcCCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCc-CCcEEEecchhhccCCCC---EEE
Confidence            99999999988   7888899999999999999996 6653 3332221112222 3569999999998 6565   999


Q ss_pred             EEeCCCCCCCchHHHHHHhhhhc---cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCC
Q 019298          258 VTTDPCGMFRKPKVVERMKKYFD---ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKST  334 (343)
Q Consensus       258 ~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~  334 (343)
                      +++        +++++.++....   ...+.+++.+.++ .++|+...+.-+.+++++++++.+.+.|+++ |+.+. +.
T Consensus       258 ~~~--------~~~~~~l~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~  326 (401)
T 1fc4_A          258 AAR--------KEVVEWLRQRSRPYLFSNSLAPAIVAAS-IKVLEMVEAGSELRDRLWANARQFREQMSAA-GFTLA-GA  326 (401)
T ss_dssp             EEC--------HHHHHHHHHHCHHHHHSCCCCHHHHHHH-HHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT-TCCBC-CS
T ss_pred             EcC--------HHHHHHHHHhCcCceeCCCCCHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCccc-CC
Confidence            984        468887776431   2446788888777 5555432222347888999999999999988 78865 67


Q ss_pred             CceEeeecC
Q 019298          335 GSSLKYLDL  343 (343)
Q Consensus       335 ~g~~~~~~l  343 (343)
                      .|+|+|+++
T Consensus       327 ~~~~~~~~~  335 (401)
T 1fc4_A          327 DHAIIPVML  335 (401)
T ss_dssp             SSSEEEEEE
T ss_pred             CCCEEEEEc
Confidence            788888763

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*

Probab=99.96  E-value=9.3e-29  Score=226.74  Aligned_cols=263  Identities=14%  Similarity=0.112  Sum_probs=195.2

Q ss_pred             eEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-------CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298           38 ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN-------GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        38 i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  110 (343)
                      +.|+.+..     .++++.+.+++.+++.+...+       .|....+..++++.+++++      ++++++|++|+|++
T Consensus         3 ~yld~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~t   71 (384)
T 1eg5_A            3 VYFDNNAT-----TRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVL------GVSPSEIFFTSCAT   71 (384)
T ss_dssp             EECBTTTC-----CCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TSCGGGEEEESCHH
T ss_pred             EEEecCcc-----CCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHc------CCCCCeEEEECCHH
Confidence            45666652     367899999999988642100       0122234578999999998      45778999999999


Q ss_pred             HHHHHHHHHhc----CCCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCC
Q 019298          111 QAIDVAMALLS----RPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG  183 (343)
Q Consensus       111 ~al~~~~~~l~----~~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~  183 (343)
                      +++..+++++.    ++||+|+++.|+|+++...+   +..|.+++.++++.  ++.+|+++|++.++++++++++++|+
T Consensus        72 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~  149 (384)
T 1eg5_A           72 ESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDS--RGVVKLEELEKLVDEDTFLVSIMAAN  149 (384)
T ss_dssp             HHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCT--TSCBCHHHHHHHCCTTEEEEEEESBC
T ss_pred             HHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCC--CCccCHHHHHHHhCCCCeEEEEECCC
Confidence            99999999997    79999999999998876655   67799999888753  46799999999998889999999999


Q ss_pred             CCcccccCHHHHHHHHHHHhhcC--cEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298          184 NPCGNVYSYQHLQKLAETANKLK--TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (343)
Q Consensus       184 nptG~~~~~~~l~~l~~~~~~~~--~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~  261 (343)
                      ||||.+++   +++|.++|+++|  +++|+|++|+.   +.. +..+   ...+.+++++|+||.++.+|  +||+++++
T Consensus       150 nptG~~~~---~~~i~~l~~~~~~~~~li~Dea~~~---~~~-~~~~---~~~~~di~~~s~sK~~g~~G--~G~~~~~~  217 (384)
T 1eg5_A          150 NEVGTIQP---VEDVTRIVKKKNKETLVHVDAVQTI---GKI-PFSL---EKLEVDYASFSAHKFHGPKG--VGITYIRK  217 (384)
T ss_dssp             TTTCBBCC---HHHHHHHHHHHCTTCEEEEECTTTT---TTS-CCCC---TTTCCSEEEEEGGGGTSCTT--CEEEEECT
T ss_pred             CCcccccC---HHHHHHHHHhcCCceEEEEEhhhhc---CCc-ccCc---hhcCCCEEEecHHHhcCCCc--eEEEEEcC
Confidence            99999988   577888888999  99999999983   221 1122   22245699999999998888  79999965


Q ss_pred             CCCCCCchHHHHHHhhh----hccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298          262 PCGMFRKPKVVERMKKY----FDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKS  333 (343)
Q Consensus       262 ~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~  333 (343)
                      ...+      ...+...    ....++++...+.++ .++|....++++ .+++++++++.+.+.|++ +|+.+..+
T Consensus       218 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~  286 (384)
T 1eg5_A          218 GVPI------RPLIHGGGQERGLRSGTQNVPGIVGA-ARAMEIAVEELSEAAKHMEKLRSKLVSGLMN-LGAHIITP  286 (384)
T ss_dssp             TSCC------CCSBCSSCTTTTTBCSCCCHHHHHHH-HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHT-TTCEECSC
T ss_pred             CCcc------ccccccCcccccccCCCCChHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHhCC-CCeEEeCC
Confidence            3100      1111110    112456777778777 556654323333 888899999999999988 48886554

>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*

Probab=99.96  E-value=3.6e-28  Score=226.05  Aligned_cols=268  Identities=15%  Similarity=0.113  Sum_probs=196.2

Q ss_pred             ccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC------------CCCHHHHHHHHHHHhhhCCCCCC
Q 019298           32 KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT------------AGLPLTRRAIAEYLSRDLPYKLT   99 (343)
Q Consensus        32 ~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~------------~g~~~lr~~ia~~~~~~~~~~~~   99 (343)
                      ..+++.+.|+.+.+     .++++.+.+++.+++...  ..|+.+            ....++++.+++++      +++
T Consensus        18 ~~~~~~iyld~~~~-----~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~   84 (423)
T 3lvm_A           18 RAMKLPIYLDYSAT-----TPVDPRVAEKMMQFMTMD--GTFGNPASRSHRFGWQAEEAVDIARNQIADLV------GAD   84 (423)
T ss_dssp             --CCSSEECBTTTC-----CCCCHHHHHHHTTSSSTT--SCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHH------TCC
T ss_pred             cccCCCEeecCCCc-----CCCCHHHHHHHHHHHhhc--ccccCCCccccchhHHHHHHHHHHHHHHHHHc------CCC
Confidence            34778888888763     357899999988876511  122221            12357788888887      457


Q ss_pred             CCcEEEecChHHHHHHHHHHhcC----CCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhcC
Q 019298          100 PNDVFVTSGCTQAIDVAMALLSR----PGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQ  172 (343)
Q Consensus       100 ~~~i~~~~g~~~al~~~~~~l~~----~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~  172 (343)
                      +++|++|+|+++++..+++++.+    +||+|+++.|+|+++...+   ...|.+++.++.++  ++.+|+++|++++++
T Consensus        85 ~~~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~  162 (423)
T 3lvm_A           85 PREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR--NGIIDLKELEAAMRD  162 (423)
T ss_dssp             GGGEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHCCT
T ss_pred             CCeEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCC--CCccCHHHHHHhcCC
Confidence            78999999999999999998874    7999999999999987776   44499999998764  567899999999998


Q ss_pred             CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCC
Q 019298          173 NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW  252 (343)
Q Consensus       173 ~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~  252 (343)
                      +++++++++|+||||.+++   +++|.++|+++|+++|+|++|+....    ...   ....+..+++.|+||.++..| 
T Consensus       163 ~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~----~~~---~~~~~~di~~~s~sK~~g~~g-  231 (423)
T 3lvm_A          163 DTILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGKL----PID---LSQLKVDLMSFSGHKIYGPKG-  231 (423)
T ss_dssp             TEEEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTS----CCC---TTTSCCSEEEEESTTTTSCSS-
T ss_pred             CcEEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCCC----CcC---hhhcCCCEEEechHHhcCCCC-
Confidence            8999999999999999988   67788889999999999999876321    111   122234599999999987777 


Q ss_pred             cEEEEEEeCCCCCCCchHHHHHHhhhh--------ccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhc
Q 019298          253 RLGWFVTTDPCGMFRKPKVVERMKKYF--------DILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYK  323 (343)
Q Consensus       253 r~G~i~~~~~~~~~~~~~~~~~l~~~~--------~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~  323 (343)
                       +||++++++.        .+.+....        ...+..+...+.++ .+++.....+++ .+++++++++.+.+.|+
T Consensus       232 -~G~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~l~~~L~  301 (423)
T 3lvm_A          232 -IGALYVRRKP--------RVRIEAQMHGGGHERGMRSGTLPVHQIVGM-GEAYRIAKEEMATEMERLRGLRNRLWNGIK  301 (423)
T ss_dssp             -CEEEEECBTT--------BCCCCCSSCSSCTTTTTCCSCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             -eEEEEEeccc--------cCCCCccccCCcccccccCCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence             8999986432        22222221        11234455555555 444443333334 88899999999999999


Q ss_pred             CCCCceeeCCCC
Q 019298          324 LIPELINFKSTG  335 (343)
Q Consensus       324 ~~~g~~~~~~~~  335 (343)
                      ++||+.+..+.+
T Consensus       302 ~~~~~~~~~~~~  313 (423)
T 3lvm_A          302 DIEEVYLNGDLE  313 (423)
T ss_dssp             TSTTEEEESCST
T ss_pred             cCCCEEEeCCcc
Confidence            998998766553

>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A

Probab=99.96  E-value=9.7e-28  Score=222.35  Aligned_cols=273  Identities=13%  Similarity=0.105  Sum_probs=198.5

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCC----CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNG----YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~  107 (343)
                      +..++||+.+++   .+++.+|.+.+++.+++++.  ....    |+......++++.++++++        .+..++++
T Consensus        58 g~~~ld~~s~~~---l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--------~~~~i~~~  126 (409)
T 3kki_A           58 SPDDIILQSNDY---LALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTG--------FDECLLSQ  126 (409)
T ss_dssp             CTTSEECCCSCT---TCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHT--------CSEEEEES
T ss_pred             CCceEEeeccCc---cCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhC--------CCeEEEec
Confidence            567888887652   34667899999999998752  1111    2222346788888988883        23455556


Q ss_pred             ChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCc
Q 019298          108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPC  186 (343)
Q Consensus       108 g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~npt  186 (343)
                      ++++++..++++++++||.|+++.|+|..+...+...|.+++.++.       .|+++|++.+.+ +++++++++|+|||
T Consensus       127 sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~vi~~~~~npt  199 (409)
T 3kki_A          127 SGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMH-------NNCDHLRMLIQRHGPGIIVVDSIYSTL  199 (409)
T ss_dssp             CHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECT-------TCHHHHHHHHHHHCSCEEEEESBCTTT
T ss_pred             chHHHHHHHHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCCC
Confidence            6679999999999999999999999999999999999999887753       579999998875 57899999999999


Q ss_pred             ccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEeCCCCC
Q 019298          187 GNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGM  265 (343)
Q Consensus       187 G~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~  265 (343)
                      |.+++   +++|.++|++||+++|+||+|..+.++..........+. .+..+++.|+||+|+++|   ||++++.    
T Consensus       200 G~~~~---l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~g---g~v~~~~----  269 (409)
T 3kki_A          200 GTIAP---LAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYRA---GAIWCNN----  269 (409)
T ss_dssp             CCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEESS----
T ss_pred             CCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCCc---eEEEECH----
Confidence            99988   788999999999999999999986554322111111111 124589999999998775   9998854    


Q ss_pred             CCchHHHHHHhhhh---ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298          266 FRKPKVVERMKKYF---DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD  342 (343)
Q Consensus       266 ~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~  342 (343)
                          ++++.++...   ......++...+++ .+++....++-+.+++++++++.+.+.|+++ |+.+.  ..++++|++
T Consensus       270 ----~~~~~~~~~~~~~~~~~~~~~~~~aa~-~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~  341 (409)
T 3kki_A          270 ----EVNRCVPFISYPAIFSSTLLPYEAAGL-ETTLEIIESADNRRQHLDRMARKLRIGLSQL-GLTIR--SESQIIGLE  341 (409)
T ss_dssp             ----SGGGTHHHHCHHHHHSBCCCHHHHHHH-HHHHHHHHHCHHHHHHHHHHHHHHHHHHHTT-TCCCC--CSSSEEEEE
T ss_pred             ----HHHHHHHHhCcCccccCCCcHHHHHHH-HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCccC--CCCCEEEEE
Confidence                3444444321   11233455555555 4555443333348888999999999999988 77764  467777765

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*

Probab=99.96  E-value=3.2e-28  Score=224.87  Aligned_cols=275  Identities=15%  Similarity=0.081  Sum_probs=198.4

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC------CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK------FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~  107 (343)
                      +++.++|+.++.   .+++.+|.+.+++.+++....      ...|+...+..++|++++++++      . +++|++++
T Consensus        45 g~~~i~~~~~~~---~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~------~-~~~i~~~s  114 (401)
T 2bwn_A           45 KQDITVWCGNDY---LGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQ------K-EAALVFSS  114 (401)
T ss_dssp             EEEEEECSCSCT---TSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTT------C-SEEEEESC
T ss_pred             CCcEEEeeCCCc---ccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhC------C-CcEEEECC
Confidence            345678877652   235567889999999886411      1235555577899999999983      2 57888877


Q ss_pred             ChHHHHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc----CCceEEEEeC
Q 019298          108 GCTQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD----QNTVALVIIN  181 (343)
Q Consensus       108 g~~~al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~----~~~~~i~~~~  181 (343)
                      |++ ++..++..+.  .+||+|+++.|+|+.+...++..|.+++.++.+       |++++++.++    ++++++++++
T Consensus       115 G~~-a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~le~~l~~~~~~~~~~v~~~~  186 (401)
T 2bwn_A          115 AYN-ANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-------DVAHLRELIAADDPAAPKLIAFES  186 (401)
T ss_dssp             HHH-HHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-------CHHHHHHHHHHSCTTSCEEEEEES
T ss_pred             cHH-HHHHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCC-------CHHHHHHHHHhhccCCceEEEEec
Confidence            766 7777766653  589999999999999999999999999888752       6788888776    5788999999


Q ss_pred             CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEEccCccccCCCCCcEEEEEEe
Q 019298          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTLGSLSKRWIVPGWRLGWFVTT  260 (343)
Q Consensus       182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~  260 (343)
                      |+||||.+++   +++|+++|++||+++|+|++|....++..........+. ...+++++|+||+|+++|   ||++++
T Consensus       187 ~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~  260 (401)
T 2bwn_A          187 VYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAAS  260 (401)
T ss_dssp             BCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEEC
T ss_pred             CcCCCCCcCC---HHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEecC
Confidence            9999999987   688889999999999999999965554222111111111 124699999999999888   999884


Q ss_pred             CCCCCCCchHHHHHHhhhh---ccccCcchHHHHHHHhccchhhHHH--HHHHHHHHHHHHHHHHhhcCCCCceeeCCCC
Q 019298          261 DPCGMFRKPKVVERMKKYF---DILGDPATFIQVCIMYGCLSTIMQI--MIHGNFLENFAGSCVPSYKLIPELINFKSTG  335 (343)
Q Consensus       261 ~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~~l~~~~~~--l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~  335 (343)
                              +++++.++...   ....+.++..+.++ .+++....++  -+.+++++++++.+.+.|+++ |+.+..+++
T Consensus       261 --------~~~~~~l~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~  330 (401)
T 2bwn_A          261 --------ARMVDAVRSYAPGFIFSTSLPPAIAAGA-QASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMPIIDHGS  330 (401)
T ss_dssp             --------HHHHHHHHHHCHHHHTSBCCCHHHHHHH-HHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCCCSS
T ss_pred             --------HHHHHHHHHhCcCceecCCCCHHHHHHH-HHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CCcccCCCC
Confidence                    36777766432   11233455666655 4555433332  347888999999999999887 888766666


Q ss_pred             ceEeeecC
Q 019298          336 SSLKYLDL  343 (343)
Q Consensus       336 g~~~~~~l  343 (343)
                      + ++|+++
T Consensus       331 ~-~~~~~~  337 (401)
T 2bwn_A          331 H-IVPVVI  337 (401)
T ss_dssp             S-CEEEEC
T ss_pred             C-eEEEEe
Confidence            5 677653

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=99.96  E-value=1.4e-27  Score=219.71  Aligned_cols=272  Identities=12%  Similarity=-0.007  Sum_probs=195.0

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCC-------
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP-------  123 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~-------  123 (343)
                      .++++.+.+++.+++.... ..|....+..++++.+++++.+.++  .++++|++|+|+++++..+++++..+       
T Consensus        40 ~~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~  116 (397)
T 3f9t_A           40 SNVLPITRKIVDIFLETNL-GDPGLFKGTKLLEEKAVALLGSLLN--NKDAYGHIVSGGTEANLMALRCIKNIWREKRRK  116 (397)
T ss_dssp             CCCCTHHHHHHHHHTTCCT-TSGGGBHHHHHHHHHHHHHHHHHTT--CTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCcHHHHHHHHHHHhhcC-CCcccChhHHHHHHHHHHHHHHHhC--CCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhh
Confidence            4567889999998876431 1222212445666666666666554  46789999999999999999998765       


Q ss_pred             ------CCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHHHHH
Q 019298          124 ------GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQ  196 (343)
Q Consensus       124 ------gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~  196 (343)
                            ||+|+++.|+|..+...++..|.+++.++.+.  ++.+|+++|++++++ +++++++++|+||||.+.+   ++
T Consensus       117 ~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~  191 (397)
T 3f9t_A          117 GLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKE--DYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDN---IE  191 (397)
T ss_dssp             TCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCT--TSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCC---HH
T ss_pred             cccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCC--CCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCC---HH
Confidence                  99999999999999999999999999998764  467999999999988 8999999999999999965   77


Q ss_pred             HHHHHHhhcCcEEEEccCCCccccCCCCC-------CcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCch
Q 019298          197 KLAETANKLKTLVIADEVYGHLVFGDKPF-------VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP  269 (343)
Q Consensus       197 ~l~~~~~~~~~~~i~D~ay~~~~~~~~~~-------~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~  269 (343)
                      +|.++|++||+++|+|++|+.+.++....       .....+.. +..+++.|++|. +++|.|+|+++++++       
T Consensus       192 ~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~-~~~~~~~g~~~~~~~-------  262 (397)
T 3f9t_A          192 ELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKM-GHCPIPSGGILFKDI-------  262 (397)
T ss_dssp             HHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTT-TCCCSSCEEEEESSG-------
T ss_pred             HHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccc-cCCCCCceEEEEeCH-------
Confidence            88999999999999999999765432110       00111112 345889999997 567789999998653       


Q ss_pred             HHHHHHhhhhccc---------c---CcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCce
Q 019298          270 KVVERMKKYFDIL---------G---DPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSS  337 (343)
Q Consensus       270 ~~~~~l~~~~~~~---------~---~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~  337 (343)
                      .+.+.++......         .   ..+..++.++ ...+.. ..+.+.+++++++++.+.+.|+++ |+.+..+..+.
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~  339 (397)
T 3f9t_A          263 GYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAV-LRYLGR-EGQRKIVNECMENTLYLYKKLKEN-NFKPVIEPILN  339 (397)
T ss_dssp             GGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCCSSS
T ss_pred             HHHHhhccCCccccCCCccccccccccchHHHHHHH-HHHHhH-HHHHHHHHHHHHHHHHHHHHHHHC-CCEEEcCCCcc
Confidence            2444332221110         1   1233444444 233321 233347888889999999999988 88855556666


Q ss_pred             Eeeec
Q 019298          338 LKYLD  342 (343)
Q Consensus       338 ~~~~~  342 (343)
                      ++|++
T Consensus       340 ~~~~~  344 (397)
T 3f9t_A          340 IVAIE  344 (397)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            66664

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*

Probab=99.96  E-value=1.4e-28  Score=229.16  Aligned_cols=285  Identities=13%  Similarity=0.054  Sum_probs=195.0

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  110 (343)
                      +..++||+.+....  .++ +++.+.+++.+++.....  ..|.+..+..+|++++++++.   + . .+++|++|+|++
T Consensus        40 g~~~id~~~~~~~~--~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~---~-~-~~~~v~~~~g~~  112 (426)
T 1sff_A           40 GREYLDFAGGIAVL--NTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVP---G-D-FAKKTLLVTTGS  112 (426)
T ss_dssp             CCEEEESSHHHHTC--TTCBTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSS---C-S-SCEEEEEESSHH
T ss_pred             CCEEEEcccChhhc--ccCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCC---c-c-cccEEEEeCchH
Confidence            56788998887431  133 689999999999865321  145566788999999999983   2 1 348999999999


Q ss_pred             HHHHHHHH---HhcCCCCeEEEeCCCCcchHH-HHHhcCce-------------eEEeecCC---CCCCCCCHHHHHhhh
Q 019298          111 QAIDVAMA---LLSRPGANILLPRPGFPIYEL-SAAFRHIE-------------VRHFDLLP---DKGWEVDLDDIESLA  170 (343)
Q Consensus       111 ~al~~~~~---~l~~~gd~vl~~~p~~~~~~~-~~~~~g~~-------------~~~~~~~~---~~~~~~d~~~l~~~~  170 (343)
                      +++..+++   .+.++| .|++.+|+|+.+.. .....|.+             ++.+++..   ..++.+|+++|++++
T Consensus       113 ~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l  191 (426)
T 1sff_A          113 EAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIF  191 (426)
T ss_dssp             HHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHH
Confidence            99999988   667776 89999999987553 45545542             55565532   113447899999888


Q ss_pred             c-----CCceEEEE-eCCCCCcc-cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccC
Q 019298          171 D-----QNTVALVI-INPGNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSL  243 (343)
Q Consensus       171 ~-----~~~~~i~~-~~p~nptG-~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~  243 (343)
                      +     ++++++++ ++++| || ..++.+++++|.++|++||+++|+||+|.++.+.+.. ..+...+   ..+.+.||
T Consensus       192 ~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~~---~~~di~s~  266 (426)
T 1sff_A          192 KNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTL-FAMEQMG---VAPDLTTF  266 (426)
T ss_dssp             HHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGTT---SCCSEEEE
T ss_pred             HhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccch-hhhhhcC---CCCCEEEE
Confidence            6     34445544 24467 99 7889999999999999999999999999987665432 1122222   12234499


Q ss_pred             ccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhh
Q 019298          244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSY  322 (343)
Q Consensus       244 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L  322 (343)
                      ||+|+. |+|+||+++++        ++++.+.... ....+.+++++.++ .++|+.... -+..++++++++.+.+.|
T Consensus       267 sK~~~~-GlriG~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~-~aal~~~~~-~~~~~~~~~~~~~l~~~l  335 (426)
T 1sff_A          267 AKSIAG-GFPLAGVTGRA--------EVMDAVAPGGLGGTYAGNPIACVAA-LEVLKVFEQ-ENLLQKANDLGQKLKDGL  335 (426)
T ss_dssp             CGGGGT-SSCCEEEEEEH--------HHHTTSCTTSBCCSSSSCHHHHHHH-HHHHHHHHH-TTHHHHHHHHHHHHHHHH
T ss_pred             cccccC-CCceEEEEEcH--------HHHhhhccCCcCcCCCCCHHHHHHH-HHHHHHHHh-cCHHHHHHHHHHHHHHHH
Confidence            999987 99999999963        5666665432 23456788888887 444432111 015566777777777766


Q ss_pred             cC----CCCceeeCCCCceEeeecC
Q 019298          323 KL----IPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       323 ~~----~~g~~~~~~~~g~~~~~~l  343 (343)
                      +.    ++.+....++ |+|+|+++
T Consensus       336 ~~~~~~~~~~~~~~~~-g~~~~~~~  359 (426)
T 1sff_A          336 LAIAEKHPEIGDVRGL-GAMIAIEL  359 (426)
T ss_dssp             HHHHHTCTTEEEEEEE-TTEEEEEE
T ss_pred             HHHHHhCCCeEEEEEE-EEEEEEEE
Confidence            54    4433333444 78888763

>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*

Probab=99.96  E-value=1.3e-27  Score=219.88  Aligned_cols=255  Identities=13%  Similarity=0.118  Sum_probs=189.5

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeCCC
Q 019298           55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRPG  133 (343)
Q Consensus        55 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~p~  133 (343)
                      +.+.+++.+++..+.+ .|.+..+..++|++++++++.       .+.|++++| ++++..+++++ .++||+|+++.|+
T Consensus        17 ~~~~~a~~~~l~~~~~-~~~~~~~~~~l~~~la~~~~~-------~~~i~~~sG-t~al~~~l~~l~~~~gd~Vi~~~~~   87 (388)
T 1b9h_A           17 DAERNGLVRALEQGQW-WRMGGDEVNSFEREFAAHHGA-------AHALAVTNG-THALELALQVMGVGPGTEVIVPAFT   87 (388)
T ss_dssp             HHHHHHHHHHHHTSCC-BTTTCSHHHHHHHHHHHHTTC-------SEEEEESCH-HHHHHHHHHHTTCCTTCEEEEESSS
T ss_pred             HHHHHHHHHHHHcCCe-eecCCHHHHHHHHHHHHHhCC-------CeEEEeCCH-HHHHHHHHHHcCCCCcCEEEECCCc
Confidence            8999999999876433 466667889999999999842       256666665 89999999999 8999999999999


Q ss_pred             CcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEcc
Q 019298          134 FPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE  213 (343)
Q Consensus       134 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~  213 (343)
                      |..+...++..|.+++.++++++ ++.+|+++|++++++++++|+   |+||||.+.   ++++|.++|+++|+++|+|+
T Consensus        88 ~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~---~l~~i~~la~~~~~~li~D~  160 (388)
T 1b9h_A           88 FISSSQAAQRLGAVTVPVDVDAA-TYNLDPEAVAAAVTPRTKVIM---PVHMAGLMA---DMDALAKISADTGVPLLQDA  160 (388)
T ss_dssp             CTHHHHHHHHTTCEEEEECBCTT-TCCBCHHHHHHHCCTTEEEEC---CBCGGGCCC---CHHHHHHHHHHHTCCBCEEC
T ss_pred             cHHHHHHHHHcCCEEEEEecCCC-cCCCCHHHHHHhcCcCceEEE---EeCCccCcC---CHHHHHHHHHHcCCEEEEec
Confidence            99999999999999999988653 478999999999987776665   999999995   56888888999999999999


Q ss_pred             CCCcc-ccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH--HHHHhhhhcc---------
Q 019298          214 VYGHL-VFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV--VERMKKYFDI---------  281 (343)
Q Consensus       214 ay~~~-~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~--~~~l~~~~~~---------  281 (343)
                      +|+.+ .+.+..   +..++    ++.+.||||.++++|.|+||+++++.       .+  +++++.....         
T Consensus       161 a~~~g~~~~~~~---~~~~~----~i~~~S~s~~K~l~g~~~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~  226 (388)
T 1b9h_A          161 AHAHGARWQGKR---VGELD----SIATFSFQNGKLMTAGEGGAVVFPDG-------ETEKYETAFLRHSCGRPRDDRRY  226 (388)
T ss_dssp             TTCTTCEETTEE---GGGSS----SCEEEECCTTSSSCSSSCEEEEECTT-------CHHHHHHHHHHTBTTCCTTCSSC
T ss_pred             chhcCCccCCee---ccccc----ceEEEEccCCCcccCCCeEEEEECCH-------HHHHHHHHHHHHhCCCCccCccc
Confidence            99863 333221   22222    48899999887787889999998652       24  4555433210         


Q ss_pred             ------c-cCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeC------CCCceEeeecC
Q 019298          282 ------L-GDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFK------STGSSLKYLDL  343 (343)
Q Consensus       282 ------~-~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~------~~~g~~~~~~l  343 (343)
                            + ...+....+++ ...+   ..+.+.+++++++++.+.+.|+++||+.+..      +.+++++|+++
T Consensus       227 ~~~~~g~~~~~~~~~~a~~-~~~~---~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (388)
T 1b9h_A          227 FHKIAGSNMRLNEFSASVL-RAQL---ARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRI  297 (388)
T ss_dssp             CCCSCCCBCBCBHHHHHHH-HHHH---TTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEEC
T ss_pred             eeecccccCCcCHHHHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEe
Confidence                  0 11233322222 2211   2233377788889999999999888888654      35688998864

>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}

Probab=99.96  E-value=2.8e-27  Score=220.30  Aligned_cols=257  Identities=14%  Similarity=0.105  Sum_probs=195.8

Q ss_pred             EeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHH
Q 019298           39 SLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAM  117 (343)
Q Consensus        39 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~  117 (343)
                      +|+.++|+    ++.++.+.+++.+++...   .|++ ..+..++|++++++++        .+++++|+|+++++..++
T Consensus        20 ~l~~~~p~----~~~p~~~~~a~~~~~~~~---~y~~~~~~~~~l~~~la~~~~--------~~~v~~~~ggt~al~~~l   84 (424)
T 2po3_A           20 PLLVGRPN----RIDRARLYERLDRALDSQ---WLSNGGPLVREFEERVAGLAG--------VRHAVATCNATAGLQLLA   84 (424)
T ss_dssp             CEETTCCC----CCCHHHHHHHHHHHHHHT---CCSSSCHHHHHHHHHHHHHHT--------SSEEEEESCHHHHHHHHH
T ss_pred             cccccCCC----CCChHHHHHHHHHHHhcC---CcccCCHHHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHH
Confidence            68889854    677889999999988653   5876 6788999999999993        369999999999999999


Q ss_pred             HHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHH
Q 019298          118 ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQK  197 (343)
Q Consensus       118 ~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~  197 (343)
                      +++. +||+|++++|+|..+...+...|.+++.+++++ +++.+|+++|++.+++++++|+++   ||||..   .++++
T Consensus        85 ~~l~-~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~---~~tG~~---~~l~~  156 (424)
T 2po3_A           85 HAAG-LTGEVIMPSMTFAATPHALRWIGLTPVFADIDP-DTGNLDPDQVAAAVTPRTSAVVGV---HLWGRP---CAADQ  156 (424)
T ss_dssp             HHHT-CCSEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTSSBCHHHHGGGCCTTEEEEEEE---CGGGCC---CCHHH
T ss_pred             HHcC-CCCEEEECCCccHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhhCcCCcEEEEE---CCCCCc---CCHHH
Confidence            9985 789999999999999999999999999998864 457799999999998788888875   489987   57888


Q ss_pred             HHHHHhhcCcEEEEccCCC-ccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHh
Q 019298          198 LAETANKLKTLVIADEVYG-HLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK  276 (343)
Q Consensus       198 l~~~~~~~~~~~i~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~  276 (343)
                      |+++|+++|+++|+|++|. ++.+++..   +..+.   + +++.||||.++++|.|+||+++++       ++++++++
T Consensus       157 i~~la~~~~~~li~Dea~~~g~~~~~~~---~~~~~---d-i~~~S~sk~K~l~~~~~G~~v~~~-------~~l~~~l~  222 (424)
T 2po3_A          157 LRKVADEHGLRLYFDAAHALGCAVDGRP---AGSLG---D-AEVFSFHATKAVNAFEGGAVVTDD-------ADLAARIR  222 (424)
T ss_dssp             HHHHHHHTTCEEEEECTTCTTCEETTEE---TTSSS---S-EEEEECCTTSSSCCSSCEEEEESC-------HHHHHHHH
T ss_pred             HHHHHHHcCCEEEEECccccCCeECCee---ccccc---C-EEEEeCCCCCCccCCCCeEEEeCC-------HHHHHHHH
Confidence            8999999999999999999 46554432   22222   2 899999977778889999999853       46777776


Q ss_pred             hhhcccc-------------CcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeC-CCCc
Q 019298          277 KYFDILG-------------DPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFK-STGS  336 (343)
Q Consensus       277 ~~~~~~~-------------~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~-~~~g  336 (343)
                      .......             ..+.....+.    +.....+-+.+++.+++++.+.+.|.++||+.+.. ++++
T Consensus       223 ~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~----l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~  292 (424)
T 2po3_A          223 ALHNFGFDLPGGSPAGGTNAKMSEAAAAMG----LTSLDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHG  292 (424)
T ss_dssp             HHHBTTTTCTTCCTTCCCBCCCCHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGS
T ss_pred             HHHhcCccccccccccCcCCCcCHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCC
Confidence            6533110             1122222222    11112222366777778888889999888888655 4443

>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}

Probab=99.96  E-value=1.6e-27  Score=220.53  Aligned_cols=272  Identities=12%  Similarity=0.101  Sum_probs=198.1

Q ss_pred             ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC---CCCCC----CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC
Q 019298           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK---FNGYA----PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Y~----~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g  108 (343)
                      +.+.|+.+.+     .++++.+.+++.+.+....   ...|.    ...+..++|+.+++++      ++++++|++|+|
T Consensus        26 ~~~~ld~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g   94 (406)
T 3cai_A           26 GWVHFDAPAG-----MLIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLV------NADPGGVVLGAD   94 (406)
T ss_dssp             SCEECBGGGC-----CCCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEEEESC
T ss_pred             CeEEEeCCCc-----CCCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCC
Confidence            4788888873     2578899999999886421   12242    1235678899999988      456789999999


Q ss_pred             hHHHHHHHHHHh---cCCCCeEEEeCCCCcchHHHHHh----cCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeC
Q 019298          109 CTQAIDVAMALL---SRPGANILLPRPGFPIYELSAAF----RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN  181 (343)
Q Consensus       109 ~~~al~~~~~~l---~~~gd~vl~~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~  181 (343)
                      +++++..+++++   .++||+|+++.|+|..+...+..    .|.+++.+++++ .++.+|+++|++.++++++++++++
T Consensus        95 ~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~~  173 (406)
T 3cai_A           95 RAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDI-ETGELPTWQWESLISKSTRLVAVNS  173 (406)
T ss_dssp             HHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCT-TTCCCCGGGHHHHCCTTEEEEEEES
T ss_pred             hHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCc-ccCCcCHHHHHHHhCCCceEEEEeC
Confidence            999999999887   78999999999999886554443    689999998764 3457899999999988899999999


Q ss_pred             CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEE-EEEEe
Q 019298          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLG-WFVTT  260 (343)
Q Consensus       182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G-~i~~~  260 (343)
                      |+||||.+++   +++|.++|+++|+++|+|++|....    ....+..+   +..+++.|+||.+| ++  +| |++++
T Consensus       174 ~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~----~~~~~~~~---~~d~~~~s~~K~~g-~~--~G~~~~~~  240 (406)
T 3cai_A          174 ASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAAPY----RLLDIRET---DADVVTVNAHAWGG-PP--IGAMVFRD  240 (406)
T ss_dssp             BCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTTTT----CCCCHHHH---CCSEEEEEGGGGTS-CS--CEEEEESC
T ss_pred             CcCCccccCC---HHHHHHHHHHcCCEEEEEcccccCC----CCCCchhc---CCCEEEeehhhhcC-CC--cCeEEEEe
Confidence            9999999987   6788888999999999999998521    11112222   34589999999865 44  89 98885


Q ss_pred             CCCCCCCchHHHHHHhhhhc---------c-ccCcchHHHHHHHhccchhhHH---------------HHH-HHHHHHHH
Q 019298          261 DPCGMFRKPKVVERMKKYFD---------I-LGDPATFIQVCIMYGCLSTIMQ---------------IMI-HGNFLENF  314 (343)
Q Consensus       261 ~~~~~~~~~~~~~~l~~~~~---------~-~~~~~~~~~~a~~~~~l~~~~~---------------~l~-~~~~~~~~  314 (343)
                              ++++++++....         . .+.++.....++ .+++.....               +++ .+++++++
T Consensus       241 --------~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~-~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  311 (406)
T 3cai_A          241 --------PSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGV-VASIEYLAALDESARGSRRERLAVSMQSADAYLNRV  311 (406)
T ss_dssp             --------HHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHH-HHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             --------hHHHhhcCCcccCCCCCccccccCCCccHHHHHHH-HHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHH
Confidence                    356666654321         1 234455544444 344433222               333 78888999


Q ss_pred             HHHHHHhhcCCCCceeeCCC---CceEeeec
Q 019298          315 AGSCVPSYKLIPELINFKST---GSSLKYLD  342 (343)
Q Consensus       315 ~~~~~~~L~~~~g~~~~~~~---~g~~~~~~  342 (343)
                      ++.+.+.|+++||+.+..+.   ++ +++++
T Consensus       312 ~~~l~~~L~~~~~~~~~~~~~~~~~-~~~~~  341 (406)
T 3cai_A          312 FDYLMVSLRSLPLVMLIGRPEAQIP-VVSFA  341 (406)
T ss_dssp             HHHHHHHHHTCTTEEECCCCSSBCS-EEEEE
T ss_pred             HHHHHHHHhcCCCeEEcCCccccCC-EEEEE
Confidence            99999999998888865653   44 56553

>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1

Probab=99.96  E-value=5.1e-28  Score=219.65  Aligned_cols=279  Identities=11%  Similarity=0.081  Sum_probs=194.2

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      ++..|||+.+.+     .++++.+++++.++... ....|++.....++++.+++++    |   .+++|++++|+++++
T Consensus         6 ~~~~id~~~~~~-----~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~l~~~la~~~----g---~~~~v~~~~~gt~a~   72 (356)
T 1v72_A            6 RPPALGFSSDNI-----AGASPEVAQALVKHSSG-QAGPYGTDELTAQVKRKFCEIF----E---RDVEVFLVPTGTAAN   72 (356)
T ss_dssp             CCCCCBCSCGGG-----CCCCHHHHHHHHHTTSS-CCCSTTCSHHHHHHHHHHHHHH----T---SCCEEEEESCHHHHH
T ss_pred             CCceEeeccCCc-----cCCCHHHHHHHHhhccC-cccccccchHHHHHHHHHHHHh----C---CCCcEEEeCCccHHH
Confidence            567899998752     45789999999887532 2235554333445555555555    3   245699999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHH--HHhc--CceeEEeecCCCCCCCCCHHHHHh-hhcC-------CceEEEEeC
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELS--AAFR--HIEVRHFDLLPDKGWEVDLDDIES-LADQ-------NTVALVIIN  181 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~--~~~~--g~~~~~~~~~~~~~~~~d~~~l~~-~~~~-------~~~~i~~~~  181 (343)
                      ..+++++.++||+|+++.|+|..+...  +...  |.+++.++.+   ++.+|+++|++ ++++       ++++|++++
T Consensus        73 ~~al~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~  149 (356)
T 1v72_A           73 ALCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPACVSITQ  149 (356)
T ss_dssp             HHHHHTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEES
T ss_pred             HHHHHHhcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC---CCeEcHHHHHHHhhhcchhhccCCceEEEEEc
Confidence            999999999999999999999765544  5666  8898888763   36799999999 8875       578899999


Q ss_pred             CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCcccc--CCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF--GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT  259 (343)
Q Consensus       182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~--~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~  259 (343)
                      |+| ||.+++.+++++|+++|++||+++|+|++|..+..  .+..+..+ .+..... +++.|+||. +. ....||+++
T Consensus       150 ~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~-~~~~~~d-~~~~s~sK~-g~-~~G~g~~~~  224 (356)
T 1v72_A          150 ATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEM-TWKAGVD-ALSFGATKN-GV-LAAEAIVLF  224 (356)
T ss_dssp             SCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTT-TGGGTCC-EEEECCGGG-TC-SSCEEEEES
T ss_pred             CCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHh-hhhhcCC-EEEEecccC-CC-cCccEEEEE
Confidence            987 99999999999999999999999999999986421  12221111 1111122 445699999 43 222347766


Q ss_pred             eCCCCCCCchHHHHHHhhhhcccc--Cc-chHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCc
Q 019298          260 TDPCGMFRKPKVVERMKKYFDILG--DP-ATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGS  336 (343)
Q Consensus       260 ~~~~~~~~~~~~~~~l~~~~~~~~--~~-~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g  336 (343)
                      +        ++++++++.......  .. ....+.+. ...+.+ ..|.+..++++++++.+.+.|++++|+.+..|.++
T Consensus       225 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~-~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~  294 (356)
T 1v72_A          225 N--------TSLATEMSYRRKRAGHLSSKMRFLSAQI-DAYLTD-DLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEA  294 (356)
T ss_dssp             S--------GGGHHHHHHHHHHTTCCCSSTHHHHHHH-HHHTST-THHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCS
T ss_pred             C--------HHHHhhHHHHhhccCchhhhHHHHHHHH-HHHHHh-hhHHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCc
Confidence            3        356666654422111  11 22223222 233333 33555777888999999999998889987778899


Q ss_pred             eEeeecC
Q 019298          337 SLKYLDL  343 (343)
Q Consensus       337 ~~~~~~l  343 (343)
                      +|+|+++
T Consensus       295 ~~~~~~~  301 (356)
T 1v72_A          295 NILFCRL  301 (356)
T ss_dssp             SEEEEEE
T ss_pred             cEEEEEc
Confidence            9999863

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*

Probab=99.96  E-value=4.7e-27  Score=220.78  Aligned_cols=306  Identities=12%  Similarity=0.042  Sum_probs=203.4

Q ss_pred             ccCccccCcCccc-cHHHHHHHHHhhccccccccceeEeccCCC--CCC---CCCCCcHHHHHHHHHHHhcCCCCCCCCC
Q 019298            3 ISNGGIDNTGSII-TIKGMLSLLMQSVDDEKNEKKVISLAMGDP--TVH---SCFHTTHVATEAVAEALLSEKFNGYAPT   76 (343)
Q Consensus         3 ~s~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~Y~~~   76 (343)
                      .+.|.....++.. .+......+..      .+.+.++|+.|.+  +..   ...+..+.+.+++.    .. ...|.+.
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~l~~~~~ylD~~~~~~~~~~~~~~~~a~~----~~-~~~y~~~   74 (456)
T 2ez2_A            6 EPFRIKSVETVSMIPRDERLKKMQE------AGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMM----MG-DEAYAGS   74 (456)
T ss_dssp             CSSCCCCCCCCCCCCHHHHHHHHHH------TTTCGGGSCGGGCSEECSCSSSCCCCCHHHHHHHT----TC-CCCSSSC
T ss_pred             CCeeeeeecccCCCCHHHHHHHHHH------CCCCcccCCcccceeeeccccCCccCCHHHHHHhh----cc-hhhcccC
Confidence            4677788877733 23332222221      1344455555543  211   11244566666654    22 2367777


Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCC-cchHHHHHhcCceeEEeecCC
Q 019298           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGF-PIYELSAAFRHIEVRHFDLLP  155 (343)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~-~~~~~~~~~~g~~~~~~~~~~  155 (343)
                      .+..+||++++++++        .+++++++|+++++..++++++++||  +++.|+| ..+...+...|.+++.+++++
T Consensus        75 ~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~~~al~~l~~~gd--i~~~~~~~~~~~~~~~~~G~~~~~v~~~~  144 (456)
T 2ez2_A           75 ENFYHLERTVQELFG--------FKHIVPTHQGRGAENLLSQLAIKPGQ--YVAGNMYFTTTRYHQEKNGAVFVDIVRDE  144 (456)
T ss_dssp             HHHHHHHHHHHHHHC--------CSEEEEESSHHHHHHHHHHHHCCTTC--EEEESSCCHHHHHHHHHTTCEEEECBCGG
T ss_pred             hhHHHHHHHHHHHhC--------CCcEEEeCCcHHHHHHHHHHhCCCCC--EeccccccchhHHHHHHcCCEEEEecccc
Confidence            788999999999993        35899999999999999999999999  7889999 777888889999999988763


Q ss_pred             C----C----CCCCCHHHHHhhhcCCc----eEEEEeCCCC-CcccccCHHHHHHHHHHHhhcCcEEEEccCCCc-----
Q 019298          156 D----K----GWEVDLDDIESLADQNT----VALVIINPGN-PCGNVYSYQHLQKLAETANKLKTLVIADEVYGH-----  217 (343)
Q Consensus       156 ~----~----~~~~d~~~l~~~~~~~~----~~i~~~~p~n-ptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~-----  217 (343)
                      +    +    ++.+|+++|++++++++    +++++++|+| |||.+++.+++++|+++|++||+++|+||+|..     
T Consensus       145 ~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~  224 (456)
T 2ez2_A          145 AHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYF  224 (456)
T ss_dssp             GGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHH
T ss_pred             cccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEcccccccccc
Confidence            2    2    36789999999887654    7889999998 999999999999999999999999999999986     


Q ss_pred             -----cccCCCCCCccc-ccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc------ccCc
Q 019298          218 -----LVFGDKPFVPMG-VFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI------LGDP  285 (343)
Q Consensus       218 -----~~~~~~~~~~~~-~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~------~~~~  285 (343)
                           +.+.+....++. ......+++++ |++|. ++.| +.||+++++       ++++++++.....      ....
T Consensus       225 ~~~~~~~~~g~~~~~~~~~~~~~~d~~~~-S~kk~-~~~~-~gG~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~  294 (456)
T 2ez2_A          225 IKEQEQGFENKSIAEIVHEMFSYADGCTM-SGKKD-CLVN-IGGFLCMND-------DEMFSSAKELVVVYEGMPSYGGL  294 (456)
T ss_dssp             HHHHSTTCTTSCHHHHHHHHHTTCSEEEE-ETTTT-TCCS-SCEEEEESC-------HHHHHHHHHHHHHHTCCTTTTTC
T ss_pred             ccccccccCCcchhhhhhhhcccCCEEEE-eCccc-CCCC-ceeEEEECC-------HHHHHHHHHHHhhccCcccccCc
Confidence                 344443211100 01112244544 77887 4566 789998843       4677776654321      1122


Q ss_pred             chHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298          286 ATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD  342 (343)
Q Consensus       286 ~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~  342 (343)
                      +.....++..+++....  .+..++.+++.+.+.+.|++. |+.+..|++|+|+|++
T Consensus       295 ~~~~~~a~a~~~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~~~~~~~~~  348 (456)
T 2ez2_A          295 AGRDMEAMAIGLREAMQ--YEYIEHRVKQVRYLGDKLKAA-GVPIVEPVGGHAVFLD  348 (456)
T ss_dssp             CHHHHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHHHHHT-TCCBCSSCCSSEEEEE
T ss_pred             chhHHHHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHhcC-CCccccCCCceEEEEE
Confidence            22222221123222110  123444455566777777775 7877678899999975

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*

Probab=99.96  E-value=2.2e-27  Score=219.25  Aligned_cols=249  Identities=15%  Similarity=0.094  Sum_probs=175.3

Q ss_pred             eEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC--CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHH
Q 019298           38 ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA--PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV  115 (343)
Q Consensus        38 i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~--~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~  115 (343)
                      .+++++.|+........+++.+++..+........|.  +.....++++.++++++        .++.++++++++++..
T Consensus        23 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--------~~~~i~~~sG~~a~~~   94 (398)
T 2rfv_A           23 STGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLER--------GEAGLATASGISAITT   94 (398)
T ss_dssp             TTCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHH
T ss_pred             CCCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHH
Confidence            3578888764333334455555554211111122333  23345677888887772        2366666667799999


Q ss_pred             HHHHhcCCCCeEEEeCCCCcchHHHH----HhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccC
Q 019298          116 AMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS  191 (343)
Q Consensus       116 ~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~  191 (343)
                      +++++.++||+|+++.|+|+++...+    ...|.+++.++..       |++++++.++++++++++++|+||||.+++
T Consensus        95 ~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~  167 (398)
T 2rfv_A           95 TLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-------KPEEIRAAMRPETKVVYIETPANPTLSLVD  167 (398)
T ss_dssp             HHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-------SHHHHHHHCCTTEEEEEEESSBTTTTBCCC
T ss_pred             HHHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHhcCCCCeEEEEECCCCCCCcccC
Confidence            99999999999999999999887765    7789998888752       799999999888999999999999999986


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE-EEEEEeCCCCCCCchH
Q 019298          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPK  270 (343)
Q Consensus       192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~-G~i~~~~~~~~~~~~~  270 (343)
                         +++|+++|+++|+++|+|++|+.+.+..    +. .+   +.++++.|+||.|+++|.|+ ||+++++        +
T Consensus       168 ---l~~i~~l~~~~~~~li~De~~~~~~~~~----~~-~~---~~di~~~s~sK~~~~~g~~~~G~~~~~~--------~  228 (398)
T 2rfv_A          168 ---IETVAGIAHQQGALLVVDNTFMSPYCQQ----PL-QL---GADIVVHSVTKYINGHGDVIGGIIVGKQ--------E  228 (398)
T ss_dssp             ---HHHHHHHHHHTTCEEEEECTTTCTTTCC----GG-GG---TCSEEEEETTTTTTCSSCCCCEEEEECH--------H
T ss_pred             ---HHHHHHHHHHcCCEEEEECCCcccccCC----ch-hh---CCcEEEEeCcccccCCCCceEEEEEECH--------H
Confidence               7888999999999999999999765432    11 12   35699999999999999998 9999853        5


Q ss_pred             HHH-HHhhhhcc--ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC
Q 019298          271 VVE-RMKKYFDI--LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       271 ~~~-~l~~~~~~--~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~  324 (343)
                      +++ .++.....  ....+++.+.++ ..+|+....   ..+++.++.+.+.+.|++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~---~~~~~~~~~~~l~~~l~~  281 (398)
T 2rfv_A          229 FIDQARFVGLKDITGGCMSPFNAWLT-LRGVKTLGI---RMERHCENALKIARFLEG  281 (398)
T ss_dssp             HHHHHHHTHHHHTTCCCCCHHHHHHH-HHHHTTHHH---HHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhCCCCCCCHHHHHHH-HhhhhhHHH---HHHHHHHHHHHHHHHHHc
Confidence            555 56554432  346777777777 555544333   333444455555555544

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}

Probab=99.95  E-value=4.1e-27  Score=218.84  Aligned_cols=284  Identities=14%  Similarity=0.080  Sum_probs=188.5

Q ss_pred             ccceeEeccCCCCCCCCCCC--cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           34 EKKVISLAMGDPTVHSCFHT--THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +..++||+.+.+.  +.++.  +|.+.+++.+++....  .|++..+...++.++++.+.+.++... +++|++|+|+++
T Consensus        41 g~~~lD~~~~~~~--~~lG~~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~~~gg~e  115 (419)
T 2eo5_A           41 GNKYLDFTSGIGV--NNLGWPSHPEVIKIGIEQMQKLA--HAAANDFYNIPQLELAKKLVTYSPGNF-QKKVFFSNSGTE  115 (419)
T ss_dssp             SCEEEESSGGGGT--TTTCBSCCHHHHHHHHHHHTTSC--CCSCSCSCCHHHHHHHHHHHHHSSCSS-CEEEEEESSHHH
T ss_pred             CCEEEEccCChhh--hccCCCCCHHHHHHHHHHHhhCc--cccccccCCHHHHHHHHHHHHhCCCCc-CCEEEEeCchHH
Confidence            5678999888754  22443  7999999999986532  233222333445555555555454333 789999999999


Q ss_pred             HHHHHHHHhcC-CCCeEEEeCCCCcchHHHHH-hcC-------------ceeEEeecCCCC--CCC------------CC
Q 019298          112 AIDVAMALLSR-PGANILLPRPGFPIYELSAA-FRH-------------IEVRHFDLLPDK--GWE------------VD  162 (343)
Q Consensus       112 al~~~~~~l~~-~gd~vl~~~p~~~~~~~~~~-~~g-------------~~~~~~~~~~~~--~~~------------~d  162 (343)
                      ++..+++.+.. +||+|++++|+|+++...+. ..|             .+++.++.....  .|+            +|
T Consensus       116 a~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~  195 (419)
T 2eo5_A          116 AIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRV  195 (419)
T ss_dssp             HHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHH
T ss_pred             HHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHH
Confidence            99999987653 48999999999986544333 211             245566553210  112            36


Q ss_pred             HHHHH-hhhcC----CceEEEEeCCC-CCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCC
Q 019298          163 LDDIE-SLADQ----NTVALVIINPG-NPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV  235 (343)
Q Consensus       163 ~~~l~-~~~~~----~~~~i~~~~p~-nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~  235 (343)
                      +++|+ +.+++    +...+++++|+ ||||. ..+.+++++|.++|++||+++|+||+|.++.+.+.. ..+...+...
T Consensus       196 ~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~-~~~~~~~~~~  274 (419)
T 2eo5_A          196 IEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKL-FAIENFNTVP  274 (419)
T ss_dssp             HHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCCC
T ss_pred             HHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcch-hhHHhcCCCC
Confidence            88999 88763    23456677885 67896 678889999999999999999999999987655432 1222222223


Q ss_pred             CEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHH
Q 019298          236 PILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENF  314 (343)
Q Consensus       236 ~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~  314 (343)
                      +++   ||||.|+. | +|+||+++++        +++ .+......+++.+++++.++ .++|+...   +.+++++++
T Consensus       275 d~~---t~sK~~~~-G~~riG~~~~~~--------~~~-~~~~~~~~t~~~n~~~~~aa-~aal~~~~---~~~~~~~~~  337 (419)
T 2eo5_A          275 DVI---TLAKALGG-GIMPIGATIFRK--------DLD-FKPGMHSNTFGGNALACAIG-SKVIDIVK---DLLPHVNEI  337 (419)
T ss_dssp             SEE---EECGGGGT-TTSCCEEEEEEG--------GGC-CC------CCCCCHHHHHHH-HHHHHHHH---HHHHHHHHH
T ss_pred             CEE---EecccccC-CccceEEEEEch--------Hhh-cCCcccCCCCCCCHHHHHHH-HHHHHHHH---HHHHHHHHH
Confidence            333   79999985 9 9999999964        344 34212233567788888888 56654322   277888899


Q ss_pred             HHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          315 AGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       315 ~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++.+.+.|+++  +....+ .|+|+|+++
T Consensus       338 ~~~l~~~L~~~--~~~~~~-~g~~~~i~~  363 (419)
T 2eo5_A          338 GKIFAEELQGL--ADDVRG-IGLAWGLEY  363 (419)
T ss_dssp             HHHHHHHHTTS--SSEEEE-ETTEEEEEC
T ss_pred             HHHHHHHHHHh--hhheEe-eeEEEEEEE
Confidence            99999999876  333233 366777654

>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*

Probab=99.95  E-value=7.4e-28  Score=218.09  Aligned_cols=273  Identities=18%  Similarity=0.131  Sum_probs=185.6

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      +..+|+|+.+...    + +++.+++++.+....  ...|.+..+..+||++++++++        .+++++++|+++++
T Consensus         2 ~~~~i~~~~~~~~----~-p~~~~~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~g--------~~~~~~~~~gt~a~   66 (347)
T 1jg8_A            2 PHMMIDLRSDTVT----K-PTEEMRKAMAQAEVG--DDVYGEDPTINELERLAAETFG--------KEAALFVPSGTMGN   66 (347)
T ss_dssp             ---CEECSCGGGC----C-CCHHHHHHHHTCCCC--CGGGTCCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHH
T ss_pred             CceEEEeccccCC----C-CCHHHHHHHhcCCCC--CcccCCChHHHHHHHHHHHHhC--------CceEEEecCcHHHH
Confidence            4567899999832    3 568888888665322  1357766788899999999983        35778888889999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchH---HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCC
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYE---LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGN  184 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~n  184 (343)
                      ..++++++++||+|++++|+|....   ..+...|.+++.+ ..  .++.+|++++++++++      +++++++++|||
T Consensus        67 ~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~--~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~n  143 (347)
T 1jg8_A           67 QVSIMAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PG--KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHN  143 (347)
T ss_dssp             HHHHHHHCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CE--ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBT
T ss_pred             HHHHHHhcCCCCEEEEcCcchhhhccccchhhccCeEEEEe-cC--CCCccCHHHHHHHhccccccccCceEEEEecccc
Confidence            9999999999999999999996533   2567789888877 32  3456899999998875      578999999999


Q ss_pred             Cc-ccccCHHHHHHHHHHHhhcCcEEEEccCCCcc--ccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298          185 PC-GNVYSYQHLQKLAETANKLKTLVIADEVYGHL--VFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (343)
Q Consensus       185 pt-G~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~--~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~  261 (343)
                      || |.+++.+++++|+++|+++|+++|+|++|...  .+.+.....+.  ...+  .++.|+||.++++   +|++++.+
T Consensus       144 pt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~--~~~d--~~~~s~sK~l~~~---~G~~~~~~  216 (347)
T 1jg8_A          144 RSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYA--GYAD--SVMFCLSKGLCAP---VGSVVVGD  216 (347)
T ss_dssp             TTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHH--HTCS--EEEEESSSTTCCS---SCEEEEEC
T ss_pred             ccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhc--cccc--EEEEecccccCCC---ceEEEEcC
Confidence            99 99999999999999999999999999997532  11122111111  1112  3445899998754   57544332


Q ss_pred             CCCCCCchHHHHHHhhhhccc---cCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCcee-eCCCCce
Q 019298          262 PCGMFRKPKVVERMKKYFDIL---GDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN-FKSTGSS  337 (343)
Q Consensus       262 ~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~-~~~~~g~  337 (343)
                             ++++++++......   ...+...+.+. ...|..   ..+..++..++++.+.+.|+++ |+.+ ..+..++
T Consensus       217 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~---~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~  284 (347)
T 1jg8_A          217 -------RDFIERARKARKMLGGGMRQAGVLAAAG-IIALTK---MVDRLKEDHENARFLALKLKEI-GYSVNPEDVKTN  284 (347)
T ss_dssp             -------HHHHHHHHHHHHHHTCCCSSTHHHHHHH-HHHHHH---SSTTHHHHHHHHHHHHHHHHHH-TCBCCGGGCCSS
T ss_pred             -------HHHHHHHHHHHHHcCCchhHHHHHHHHH-HHHHHH---HHHHHHHHHHHHHHHHHHHHhc-CceeccCCCcce
Confidence                   46777766553221   12233444444 233322   1122233345677788888777 6664 2455677


Q ss_pred             EeeecC
Q 019298          338 LKYLDL  343 (343)
Q Consensus       338 ~~~~~l  343 (343)
                      |+|+++
T Consensus       285 ~~~~~~  290 (347)
T 1jg8_A          285 MVILRT  290 (347)
T ss_dssp             EEEEEC
T ss_pred             EEEEEc
Confidence            888764

>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*

Probab=99.95  E-value=2.3e-27  Score=217.37  Aligned_cols=267  Identities=15%  Similarity=0.037  Sum_probs=189.2

Q ss_pred             CCCcHHHHHHHHHHHhcCC---CCCCCCC----CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc--
Q 019298           51 FHTTHVATEAVAEALLSEK---FNGYAPT----AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS--  121 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~---~~~Y~~~----~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~--  121 (343)
                      .++++.+++++.+.+.+..   ...|...    ....++|+.+++++      +++++++++|+|+++++..+++++.  
T Consensus        10 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~t~a~~~~~~~l~~~   83 (382)
T 4eb5_A           10 KPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLV------NGGGGTVVFTSGATEANNLAIIGYAMR   83 (382)
T ss_dssp             CCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TCTTEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEcCchHHHHHHHHHHHHhh
Confidence            3578999999999886421   1114321    24567888888887      3467899999999999999999997  


Q ss_pred             --CCCCeEEEeCCCCcchHHHHHh---cCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHH
Q 019298          122 --RPGANILLPRPGFPIYELSAAF---RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQ  196 (343)
Q Consensus       122 --~~gd~vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~  196 (343)
                        ++||+|++++|+|+.+...+..   .|.+++.++++.  ++.+|+++|++.++++++++++++|+||||.+++   ++
T Consensus        84 ~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~  158 (382)
T 4eb5_A           84 NARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK--YGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP---VE  158 (382)
T ss_dssp             HGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---HH
T ss_pred             ccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCC--CCccCHHHHHHHhcCCCeEEEEeccCCCccccCC---HH
Confidence              8999999999999988666543   689999888753  4678999999999888899999999999999987   57


Q ss_pred             HHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHH-
Q 019298          197 KLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM-  275 (343)
Q Consensus       197 ~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l-  275 (343)
                      +|.++|+++|++ |+|++|+..    ..+..+..+   +.+++++|+||.++.+|  +||++++++..+.   ...... 
T Consensus       159 ~i~~l~~~~~~~-i~D~a~~~g----~~~~~~~~~---~~di~~~s~sK~~g~~g--~G~~~~~~~~~l~---~~~~~~~  225 (382)
T 4eb5_A          159 EISEVLAGKAAL-HIDATASVG----QIEVDVEKI---GADMLTISSNDIYGPKG--VGALWIRKEAKLQ---PVILGGG  225 (382)
T ss_dssp             HHHHHHTTSSEE-EEECTTTBT----TBCCCHHHH---TCSEEEEETGGGTCCSS--CEEEEEETTCCCC---CSSCSSC
T ss_pred             HHHHHHHHCCCE-EEEcchhcC----CcccCcccc---CCCEEEeehHHhcCCCc--eEEEEEccccccC---ceecCCC
Confidence            889999999999 999999842    111122212   34589999999987666  7999987642111   000000 


Q ss_pred             hhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCC---ceEeeec
Q 019298          276 KKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTG---SSLKYLD  342 (343)
Q Consensus       276 ~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~---g~~~~~~  342 (343)
                      .......+.++...+.++ .+++....+.++ .+++++++++.+.+.|+++||+.+..+.+   +.++|++
T Consensus       226 ~~~~~~~~~~~~~~~~~~-~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~  295 (382)
T 4eb5_A          226 QENGLRSGSENVPSIVGF-GKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVR  295 (382)
T ss_dssp             TGGGTSCSCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEE
T ss_pred             ccccccCCCccHHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEE
Confidence            000111234455555544 444443223333 78889999999999999988888756542   4455543

>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*

Probab=99.95  E-value=2.8e-27  Score=217.77  Aligned_cols=269  Identities=13%  Similarity=0.065  Sum_probs=195.8

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP--TAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCT  110 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~  110 (343)
                      ....++++.|.      .++++.+.+++.+++..    .|.+  ..+..++++.+++++      +++++ +|++|+|++
T Consensus        17 ~~~~~~~~~g~------~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~------g~~~~~~i~~~~g~t   80 (393)
T 2huf_A           17 TPNKLLMGPGP------SNAPQRVLDAMSRPILG----HLHPETLKIMDDIKEGVRYLF------QTNNIATFCLSASGH   80 (393)
T ss_dssp             CCCCEECSSSC------CCCCHHHHHHTTSCCCC----TTSHHHHHHHHHHHHHHHHHH------TCCCSEEEEESSCHH
T ss_pred             CCCeEEecCCC------CCCCHHHHHHHHhhhcc----CCCHHHHHHHHHHHHHHHHHh------CCCCCcEEEEcCcHH
Confidence            34556666663      56788888887776542    2322  235678888888888      34565 899999999


Q ss_pred             HHHHHHHHHhcCCCCeEEEeCCCCcchH--HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcc
Q 019298          111 QAIDVAMALLSRPGANILLPRPGFPIYE--LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCG  187 (343)
Q Consensus       111 ~al~~~~~~l~~~gd~vl~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG  187 (343)
                      +++..+++++.++||+|++++|+|.++.  ..++..|.+++.++++.  ++.+|++++++.+++ ++++|++++|+||||
T Consensus        81 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG  158 (393)
T 2huf_A           81 GGMEATLCNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSKV--GQSLSLDEIRDALLIHKPSVLFLTQGDSSTG  158 (393)
T ss_dssp             HHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTT
T ss_pred             HHHHHHHHHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCC--CCCCCHHHHHHHHhccCCcEEEEEccCCCcc
Confidence            9999999999999999999999998742  34566799999998754  356899999999987 899999999999999


Q ss_pred             cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccc-cCCCCCcEEEEEEeCCCCCC
Q 019298          188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKR-WIVPGWRLGWFVTTDPCGMF  266 (343)
Q Consensus       188 ~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~~G~r~G~i~~~~~~~~~  266 (343)
                      .+++   +++|.++|+++|+++|+|+++....    ....   +...+..+++.|+||+ ++.+|+  ||++++      
T Consensus       159 ~~~~---l~~i~~~~~~~~~~li~D~a~~~~~----~~~~---~~~~~~d~~~~s~sK~l~g~~G~--G~~~~~------  220 (393)
T 2huf_A          159 VLQG---LEGVGALCHQHNCLLIVDTVASLGG----APMF---MDRWEIDAMYTGSQKVLGAPPGI--TPVSFS------  220 (393)
T ss_dssp             EECC---CTTHHHHHHHTTCEEEEECTTTBTT----BCCC---TTTTTCSEEECCSSSTTCCCSSC--EEEEEC------
T ss_pred             ccCC---HHHHHHHHHHcCCEEEEEcccccCC----CCcc---hhhcCccEEEECCCcccccCCCe--EEEEEC------
Confidence            9987   7888999999999999999986421    1111   2222456899999997 456786  999985      


Q ss_pred             CchHHHHHHhhhh----c-------------------c-ccCcchHHHHHHHhccchhhHH--HHHHHHHHHHHHHHHHH
Q 019298          267 RKPKVVERMKKYF----D-------------------I-LGDPATFIQVCIMYGCLSTIMQ--IMIHGNFLENFAGSCVP  320 (343)
Q Consensus       267 ~~~~~~~~l~~~~----~-------------------~-~~~~~~~~~~a~~~~~l~~~~~--~l~~~~~~~~~~~~~~~  320 (343)
                        ++++++++...    .                   . ...++...+.++ .+++....+  +-+.+++++++++.+.+
T Consensus       221 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~~l~~  297 (393)
T 2huf_A          221 --HRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGL-REAIAMACEEGLPALIARHEDCAKRLYR  297 (393)
T ss_dssp             --HHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHH-HHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             --HHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHH-HHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence              36777776531    1                   0 123445555544 445443222  22378888999999999


Q ss_pred             hhcCCCCceeeCCC---CceEeeec
Q 019298          321 SYKLIPELINFKST---GSSLKYLD  342 (343)
Q Consensus       321 ~L~~~~g~~~~~~~---~g~~~~~~  342 (343)
                      .|+++ |+.+..++   +++++|++
T Consensus       298 ~L~~~-g~~~~~~~~~~~~~~~~~~  321 (393)
T 2huf_A          298 GLQDA-GFELYADPKDRLSTVTTIK  321 (393)
T ss_dssp             HHHHT-TCCBSSCGGGBCTTEEEEE
T ss_pred             HHHHc-CCeeccCccccCCcEEEEE
Confidence            99988 88865553   35566654

>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*

Probab=99.95  E-value=5.5e-27  Score=215.79  Aligned_cols=268  Identities=10%  Similarity=0.025  Sum_probs=191.0

Q ss_pred             eeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC-CCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHH
Q 019298           37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGY-APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV  115 (343)
Q Consensus        37 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y-~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~  115 (343)
                      .+.|+.+.+     .++++.+.+++.+.+..   +.| ....+..++|+.+++++      ++++++|++|+|+++++..
T Consensus         9 ~~yl~~~~~-----~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~t~g~t~a~~~   74 (392)
T 2z9v_A            9 PVITLTAGP-----VNAYPEVLRGLGRTVLY---DYDPAFQLLYEKVVDKAQKAM------RLSNKPVILHGEPVLGLEA   74 (392)
T ss_dssp             CSEECSSSC-----CCCCHHHHHHTTSCCCC---TTSHHHHHHHHHHHHHHHHHT------TCSSCCEEESSCTHHHHHH
T ss_pred             cceeecCCC-----cCCCHHHHHHHhccccc---cccHHHHHHHHHHHHHHHHHh------CCCCCEEEEeCCchHHHHH
Confidence            355665542     46678888888776543   112 12234567888888887      3467899999999999999


Q ss_pred             HHHHhcCCCCeEEEeCCCCcch--HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc--CCceEEEEeCCCCCcccccC
Q 019298          116 AMALLSRPGANILLPRPGFPIY--ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD--QNTVALVIINPGNPCGNVYS  191 (343)
Q Consensus       116 ~~~~l~~~gd~vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--~~~~~i~~~~p~nptG~~~~  191 (343)
                      +++++.++||+|++++|+|+++  ...++..|.+++.++++.  ++.+|+++|+++++  ++++++++++|+||||.+++
T Consensus        75 ~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~  152 (392)
T 2z9v_A           75 AAASLISPDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPY--NEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINP  152 (392)
T ss_dssp             HHHHHCCTTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCT--TSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECC
T ss_pred             HHHHhcCCCCEEEEecCCcccHHHHHHHHHcCCceEEeeCCC--CCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceecc
Confidence            9999999999999999999775  334455799999998754  34689999999984  47889999999999999987


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCcccc-CCCCCcEEEEEEeCCCCCCCchH
Q 019298          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPK  270 (343)
Q Consensus       192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~i~~~~~~~~~~~~~  270 (343)
                         +++|.++|+++|+++|+|++|+...    ....+..+   +..++++|+||++ +.+|  +||++++        ++
T Consensus       153 ---l~~i~~l~~~~~~~li~D~a~~~g~----~~~~~~~~---~~d~~~~s~sK~~~~~~g--~G~l~~~--------~~  212 (392)
T 2z9v_A          153 ---IDAIGALVSAHGAYLIVDAVSSFGG----MKTHPEDC---KADIYVTGPNKCLGAPPG--LTMMGVS--------ER  212 (392)
T ss_dssp             ---HHHHHHHHHHTTCEEEEECTTTBTT----BSCCGGGG---TCSEEEECSSSTTCCCSC--CEEEEEC--------HH
T ss_pred             ---HHHHHHHHHHcCCeEEEEcccccCC----cccccccc---cceEEEecCcccccCCCc--eeEEEEC--------HH
Confidence               6788889999999999999998421    11112222   3458999999964 4456  5999985        36


Q ss_pred             HHHHHhhhh---------------------ccccCcchHHHHHHHhccchhhHHH-H-HHHHHHHHHHHHHHHhhcCCCC
Q 019298          271 VVERMKKYF---------------------DILGDPATFIQVCIMYGCLSTIMQI-M-IHGNFLENFAGSCVPSYKLIPE  327 (343)
Q Consensus       271 ~~~~l~~~~---------------------~~~~~~~~~~~~a~~~~~l~~~~~~-l-~~~~~~~~~~~~~~~~L~~~~g  327 (343)
                      ++++++...                     ...+.++...+.++ .+++...... + +.+++++++++.+.+.|+++ |
T Consensus       213 ~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g  290 (392)
T 2z9v_A          213 AWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGL-DVALDLYLNEGPEAVWARHALTAKAMRAGVTAM-G  290 (392)
T ss_dssp             HHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHH-HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred             HHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHH-HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc-C
Confidence            777775311                     11234455544444 4444432332 3 37888999999999999888 8


Q ss_pred             ceeeCCC----CceEeeec
Q 019298          328 LINFKST----GSSLKYLD  342 (343)
Q Consensus       328 ~~~~~~~----~g~~~~~~  342 (343)
                      +.+..|.    .++++|++
T Consensus       291 ~~~~~~~~~~~~~~~~~~~  309 (392)
T 2z9v_A          291 LSVWAASDSIASPTTTAVR  309 (392)
T ss_dssp             CCBSSSSGGGBCTTEEEEE
T ss_pred             CeeccCCccccCCceEEEE
Confidence            8865533    46666664

>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A

Probab=99.95  E-value=1.4e-27  Score=220.84  Aligned_cols=259  Identities=20%  Similarity=0.156  Sum_probs=184.6

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      ++.++||+.+.+....++ .+|.+.+++.+++....  ...|+. ....++++.+++++        ..+++++++|+++
T Consensus        38 g~~~lD~~~~~~~~~lg~-~~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~--------~~~~v~~~~gg~~  107 (406)
T 4adb_A           38 GKEYIDFAGGIAVNALGH-AHPELREALNEQASKFWHTGNGYTN-EPVLRLAKKLIDAT--------FADRVFFCNSGAE  107 (406)
T ss_dssp             CCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCSCCCTTSCC-HHHHHHHHHHHHHS--------SCSEEEEESSHHH
T ss_pred             CCEEEECCCchhhcccCC-CCHHHHHHHHHHHHhcccccCCcCC-HHHHHHHHHHHhhC--------CCCeEEEeCcHHH
Confidence            677899998853322222 58999999999887531  122322 22345555555554        3569999999999


Q ss_pred             HHHHHHHHhcC-------CC-CeEEEeCCCCcchHHHHHhcCce-------------eEEeecCCCCCCCCCHHHHHhhh
Q 019298          112 AIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPDKGWEVDLDDIESLA  170 (343)
Q Consensus       112 al~~~~~~l~~-------~g-d~vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~~~l~~~~  170 (343)
                      ++..+++.+..       +| |.|++.+|+|+.+...+...+..             +..++.       .|+++|++++
T Consensus       108 a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l  180 (406)
T 4adb_A          108 ANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-------NDINSASALI  180 (406)
T ss_dssp             HHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-------TCHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-------CcHHHHHHHh
Confidence            99999998864       55 99999999999886655555432             222221       3799999999


Q ss_pred             cCCceEEEEeCCCCCccccc--CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccC
Q 019298          171 DQNTVALVIINPGNPCGNVY--SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI  248 (343)
Q Consensus       171 ~~~~~~i~~~~p~nptG~~~--~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~  248 (343)
                      ++++++++++ |+||||.++  +.+++++|.++|++||+++|+||+|.++.+.+... .....+...+++   ||||.|+
T Consensus       181 ~~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~~---t~sK~~~  255 (406)
T 4adb_A          181 DDSTCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPDLL---TTAKALG  255 (406)
T ss_dssp             STTEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGGGG
T ss_pred             cCCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhH-HHHhcCCCCCEE---Eechhhc
Confidence            8788888877 999999998  99999999999999999999999999876655432 222223223444   6799998


Q ss_pred             CCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCC
Q 019298          249 VPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLI  325 (343)
Q Consensus       249 ~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~  325 (343)
                       +|+|+||++++        +++++.++... ...++.+++.+.++ .++|+.... -+.+++++++++.+.+.|+++
T Consensus       256 -~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~~  322 (406)
T 4adb_A          256 -GGFPVGALLAT--------EECARVMTVGTHGTTYGGNPLASAVA-GKVLELINT-PEMLNGVKQRHDWFVERLNTI  322 (406)
T ss_dssp             -TTSCCEEEEEC--------HHHHHTCCTTSSCCSSTTCHHHHHHH-HHHHHHHSS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCCeEEEEEc--------HHHHhhhccCCcCCCCCCCHHHHHHH-HHHHHHHHh-cCHHHHHHHHHHHHHHHHHHH
Confidence             89999999885        36777776553 23567788888887 455443211 236777788888888877654

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*

Probab=99.95  E-value=2.7e-28  Score=225.21  Aligned_cols=277  Identities=12%  Similarity=0.065  Sum_probs=188.2

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      +..++||+.+...  ..++ .+|.+.+++.+++.....  +.. ....++++.+++.+.+.+|    ++++++++|++++
T Consensus        39 g~~~ld~~~~~~~--~~lg~~~~~v~~a~~~~~~~~~~--~~~-~~~~~~~~~l~~~la~~~g----~~~v~~~~gg~~a  109 (397)
T 2ord_A           39 GNAYLDFTSGIAV--NVLGHSHPRLVEAIKDQAEKLIH--CSN-LFWNRPQMELAELLSKNTF----GGKVFFANTGTEA  109 (397)
T ss_dssp             CCEEEESSHHHHT--CTTCBTCHHHHHHHHHHHHHCSC--CCT-TSEEHHHHHHHHHHHHTTT----SCEEEEESSHHHH
T ss_pred             CCEEEECCccccc--cccCCCCHHHHHHHHHHHHhccc--Ccc-ccCCHHHHHHHHHHHHhcC----CCeEEEeCCHHHH
Confidence            6678899887421  1122 588999999998865321  111 1112344444444444333    5899999999999


Q ss_pred             HHHHHHHhcC------C-CCeEEEeCCCCcchH-HHHHhcCce------------eEEeecCCCCCCCCCHHHHHhhhcC
Q 019298          113 IDVAMALLSR------P-GANILLPRPGFPIYE-LSAAFRHIE------------VRHFDLLPDKGWEVDLDDIESLADQ  172 (343)
Q Consensus       113 l~~~~~~l~~------~-gd~vl~~~p~~~~~~-~~~~~~g~~------------~~~~~~~~~~~~~~d~~~l~~~~~~  172 (343)
                      +..+++++..      + ++.|++.+|+|+... ..+...|.+            +..++.       .|+++|++.+++
T Consensus       110 ~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~l~~  182 (397)
T 2ord_A          110 NEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRKMSE  182 (397)
T ss_dssp             HHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-------TCHHHHHHHCCT
T ss_pred             HHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-------CCHHHHHHHhhc
Confidence            9999998763      4 478999999996543 366666665            445543       279999999988


Q ss_pred             CceEEEEeCCCCCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCC
Q 019298          173 NTVALVIINPGNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG  251 (343)
Q Consensus       173 ~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G  251 (343)
                      +++++++++|+||||. +++.+++++|+++|++||+++|+||+|.++.+.+.. ..+..++...+++   ||||.|+ +|
T Consensus       183 ~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~~~d~~---s~sK~~~-~G  257 (397)
T 2ord_A          183 DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKL-FAYQKYGVVPDVL---TTAKGLG-GG  257 (397)
T ss_dssp             TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SHHHHHTCCCSEE---EECGGGG-TT
T ss_pred             CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccc-hhhhhhCCCCCee---eeccccC-CC
Confidence            8999999999999999 999999999999999999999999999987655432 2222233222333   7899988 89


Q ss_pred             CcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCC-Cce
Q 019298          252 WRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIP-ELI  329 (343)
Q Consensus       252 ~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~-g~~  329 (343)
                      +|+||++++++        ++ .++.. ....++.+++.+.++ .++|+...+ -+.+++++++++.+.+.|++++ ++.
T Consensus       258 ~r~G~~~~~~~--------~~-~l~~~~~~~~~~~~~~~~~a~-~~~l~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~  326 (397)
T 2ord_A          258 VPIGAVIVNER--------AN-VLEPGDHGTTFGGNPLACRAG-VTVIKELTK-EGFLEEVEEKGNYLMKKLQEMKEEYD  326 (397)
T ss_dssp             SCCEEEEECST--------TC-CCCTTSSCCSSTTCHHHHHHH-HHHHHHHTS-TTHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             cCeEEEEEchH--------hc-ccCCCCcCCCCCCCHHHHHHH-HHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999998652        33 34322 222456788888777 455543222 1267888888888888887641 222


Q ss_pred             e--eCCCCceEeeec
Q 019298          330 N--FKSTGSSLKYLD  342 (343)
Q Consensus       330 ~--~~~~~g~~~~~~  342 (343)
                      .  ..+..|.|+|++
T Consensus       327 ~~~~~~~~g~~~~~~  341 (397)
T 2ord_A          327 VVADVRGMGLMIGIQ  341 (397)
T ss_dssp             TEEEEEEETTEEEEE
T ss_pred             ceEEEEEEeEEEEEE
Confidence            1  122345677765

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.95  E-value=5.7e-27  Score=215.89  Aligned_cols=275  Identities=14%  Similarity=0.078  Sum_probs=194.8

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF-NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      ++.++||+.+.+..  .++ .+|.+.+++.+++..... ..+.+.....++++.+++++        .++++++++|+++
T Consensus        35 g~~~lD~~~~~~~~--~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~--------g~~~v~~~~~gt~  104 (392)
T 3ruy_A           35 GNRYMDLLSAYSAV--NQGHRHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLT--------NKEMVLPMNTGAE  104 (392)
T ss_dssp             CCEEEESSHHHHTC--TTCBTCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHH--------TCSEEEEESSHHH
T ss_pred             CCEEEEcCCChhhh--ccCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhc--------CCCEEEEeCcHHH
Confidence            67789999886431  122 579999999998865321 11112234567777777776        3789999999999


Q ss_pred             HHHHHHHHhcCC----------CCeEEEeCCCCcchHHHHHhcCce-------------eEEeecCCCCCCCCCHHHHHh
Q 019298          112 AIDVAMALLSRP----------GANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPDKGWEVDLDDIES  168 (343)
Q Consensus       112 al~~~~~~l~~~----------gd~vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~~~l~~  168 (343)
                      ++..+++.+..+          +|+|+++.|+|+++...+...+..             +..++.       .|+++|++
T Consensus       105 a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~  177 (392)
T 3ruy_A          105 AVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-------GDLEALKA  177 (392)
T ss_dssp             HHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-------TCHHHHHH
T ss_pred             HHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-------ccHHHHHH
Confidence            999999987644          689999999998776655444322             222221       27999999


Q ss_pred             hhcCCceEEEEeCCCCCcccccCHHH-HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCcccc
Q 019298          169 LADQNTVALVIINPGNPCGNVYSYQH-LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW  247 (343)
Q Consensus       169 ~~~~~~~~i~~~~p~nptG~~~~~~~-l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~  247 (343)
                      +++++++++++++|+||||.+++.++ +++|+++|++||+++|+||+|.++.+.+... .....+...+++   |+||.+
T Consensus       178 ~l~~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~~---~~SK~l  253 (392)
T 3ruy_A          178 AITPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVF-ACDWDNVTPDMY---ILGKAL  253 (392)
T ss_dssp             HCCTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECGGG
T ss_pred             HhccCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccch-hhhccCCCCCEE---EEchhh
Confidence            99888999999999999999996555 9999999999999999999998876655422 222222222333   678985


Q ss_pred             CCCC-CcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCC
Q 019298          248 IVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLI  325 (343)
Q Consensus       248 ~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~  325 (343)
                      +. | +|+||++++        +++++.++.... ..++.+++.+.++ .++|+.... -+.+++++++++.+.+.|+++
T Consensus       254 ~g-G~~~~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~-~~~~~~~~~~~~~l~~~L~~~  322 (392)
T 3ruy_A          254 GG-GVFPISCAAAN--------RDILGVFEPGSHGSTFGGNPLACAVS-IAALEVLEE-EKLTERSLQLGEKLVGQLKEI  322 (392)
T ss_dssp             GT-TTSCCEEEEEC--------HHHHTTCCTTSSCCSSTTCHHHHHHH-HHHHHHHHH-TTHHHHHHHHHHHHHHHHTTC
T ss_pred             hC-ChhhhEEEEEC--------HHHHhhhccCCcCCCCCCCHHHHHHH-HHHHHHHHh-hhHHHHHHHHHHHHHHHHHHh
Confidence            43 6 999999985        356666665432 3557788888887 555543222 237888999999999999886


Q ss_pred             --CCceeeCCCCceEee
Q 019298          326 --PELINFKSTGSSLKY  340 (343)
Q Consensus       326 --~g~~~~~~~~g~~~~  340 (343)
                        +.+....+.++++.|
T Consensus       323 ~~~~~~~~~~~g~~~~~  339 (392)
T 3ruy_A          323 DNPMITEVRGKGLFIGI  339 (392)
T ss_dssp             CCTTEEEEEEETTEEEE
T ss_pred             cCCCceEEEeeeeEEEE
Confidence              334444555555544

>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.95  E-value=3.1e-27  Score=214.16  Aligned_cols=258  Identities=18%  Similarity=0.136  Sum_probs=186.4

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCC-CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEE
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYA-PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILL  129 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~  129 (343)
                      .++++.+++++.+++..   +.|+ ...+..++|+.+++++      +++++++++|+|+++++..+++++.++||+|++
T Consensus        10 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~------g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~   80 (352)
T 1iug_A           10 VRLHPKALEALARPQLH---HRTEAAREVFLKARGLLREAF------RTEGEVLILTGSGTLAMEALVKNLFAPGERVLV   80 (352)
T ss_dssp             CCCCHHHHHHHHSCCCC---TTSHHHHHHHHHHHHHHHHHH------TCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEE
T ss_pred             CCCCHHHHHHhccCCCC---ccCHHHHHHHHHHHHHHHHHh------CCCCceEEEcCchHHHHHHHHHhccCCCCeEEE
Confidence            56789999998887642   1222 1234578999999998      346789999999999999999999999999999


Q ss_pred             eCCCCcchH--HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhc--
Q 019298          130 PRPGFPIYE--LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL--  205 (343)
Q Consensus       130 ~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~--  205 (343)
                      ++|+|+++.  ..+...|.+++.++++.  ++.+|++++++   ++++++++++|+||||.+++   +++|.++|+++  
T Consensus        81 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~---~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~  152 (352)
T 1iug_A           81 PVYGKFSERFYEIALEAGLVVERLDYPY--GDTPRPEDVAK---EGYAGLLLVHSETSTGALAD---LPALARAFKEKNP  152 (352)
T ss_dssp             EECSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCTTTSCC---SSCSEEEEESEETTTTEECC---HHHHHHHHHHHCT
T ss_pred             EeCCchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHhc---cCCcEEEEEEecCCcceecC---HHHHHHHHHhhCC
Confidence            999998865  44456799999998753  34688888877   57889999999999999987   67888899999  


Q ss_pred             CcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH---------Hh
Q 019298          206 KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER---------MK  276 (343)
Q Consensus       206 ~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~---------l~  276 (343)
                      |+++|+|++|+...   . ...+..   .+..++++|+||+++.+ .++||+++++        +++++         ++
T Consensus       153 ~~~li~D~a~~~~~---~-~~~~~~---~~~d~~~~s~~K~~~~~-~g~G~~~~~~--------~~~~~~~~~~~~~~~~  216 (352)
T 1iug_A          153 EGLVGADMVTSLLV---G-EVALEA---MGVDAAASGSQKGLMCP-PGLGFVALSP--------RALERLKPRGYYLDLA  216 (352)
T ss_dssp             TCEEEEECTTTBTT---B-CCCSGG---GTCSEEEEESSSTTCCC-SCEEEEEECH--------HHHHTCCCCSSTTCHH
T ss_pred             CCEEEEECCccccC---c-ceeccc---cCeeEEEecCcccccCC-CceeEEEECH--------HHHHHhhCCCceeeHH
Confidence            99999999997421   1 111221   13458899999954332 2489999853        44433         11


Q ss_pred             ----hh--hccccCcchHHHHHHHhccchhhHHHH-HHHHHHHHHHHHHHHhhcCCCCceeeCCC-CceEeeecC
Q 019298          277 ----KY--FDILGDPATFIQVCIMYGCLSTIMQIM-IHGNFLENFAGSCVPSYKLIPELINFKST-GSSLKYLDL  343 (343)
Q Consensus       277 ----~~--~~~~~~~~~~~~~a~~~~~l~~~~~~l-~~~~~~~~~~~~~~~~L~~~~g~~~~~~~-~g~~~~~~l  343 (343)
                          ..  ....+.++...+.++ .+++.....++ +.+++++++++.+.+.|+++ |+.+..+. .++++|+++
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~  289 (352)
T 1iug_A          217 RELKAQKEGESAWTPAINLVLAV-AAVLEEVLPRLEEHLALKAWQNALLYGVGEEG-GLRPVPKRFSPAVAAFYL  289 (352)
T ss_dssp             HHHHHHTTTCCSSCCCHHHHHHH-HHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHT-TCEESCSSBCTTCEEEEC
T ss_pred             HHHhhcccCCCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccccccCCeEEEEEc
Confidence                11  112345566666555 44444322223 48888999999999999988 88876664 677887753

>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*

Probab=99.95  E-value=7.6e-27  Score=215.67  Aligned_cols=264  Identities=16%  Similarity=0.138  Sum_probs=198.7

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~  114 (343)
                      .+++||+.|.+.    +  ++.+.+++.+++...   .|.+..+..++|++++++++        .+++++++|+++++.
T Consensus        30 ~~~id~~~~~~~----~--~~~v~~a~~~~~~~~---~y~~~~~~~~l~~~la~~~~--------~~~~v~~~~Gt~a~~   92 (399)
T 2oga_A           30 VPFLDLKAAYEE----L--RAETDAAIARVLDSG---RYLLGPELEGFEAEFAAYCE--------TDHAVGVNSGMDALQ   92 (399)
T ss_dssp             BCSCCHHHHHHH----T--HHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHTT--------SSEEEEESCHHHHHH
T ss_pred             CcccccCcCCCC----C--CHHHHHHHHHHHhcC---CCCCchhHHHHHHHHHHHHC--------CCeEEEecCHHHHHH
Confidence            477899999843    2  388999999888652   57666678899999999983        236778888899999


Q ss_pred             HHHHHh-cCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298          115 VAMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       115 ~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~  193 (343)
                      .+++++ +++||+|+++.|+|..+...++..|.+++.+++++ +++.+|++++++.+++++++++   |+||||...+  
T Consensus        93 ~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~--  166 (399)
T 2oga_A           93 LALRGLGIGPGDEVIVPSHTYIASWLAVSATGATPVPVEPHE-DHPTLDPLLVEKAITPRTRALL---PVHLYGHPAD--  166 (399)
T ss_dssp             HHHHHTTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCS-SSSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCC--
T ss_pred             HHHHHhCCCCcCEEEECCCccHHHHHHHHHCCCEEEEEecCC-CCCCcCHHHHHHhcCCCCeEEE---EeCCcCCccC--
Confidence            999999 89999999999999999999999999999998864 3567999999999987777665   6789999865  


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccc-cCCCCCCcccccCCCCCEEEEccC--ccccCCCCCcEEEEEEeCCCCCCCchH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSL--SKRWIVPGWRLGWFVTTDPCGMFRKPK  270 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~-~~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~i~~~~~~~~~~~~~  270 (343)
                       +++|.++|+++|+++|+|++|..+. +++..   +..+.    .+++.|+  ||.++.+| |+||+++++       ++
T Consensus       167 -l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~---~~~~~----di~~~S~~~sK~~~~~G-~~g~~~~~~-------~~  230 (399)
T 2oga_A          167 -MDALRELADRHGLHIVEDAAQAHGARYRGRR---IGAGS----SVAAFSFYPGKNLGCFG-DGGAVVTGD-------PE  230 (399)
T ss_dssp             -HHHHHHHHHHHTCEECEECTTCTTCEETTEE---TTCTT----CEEEEECCTTSSSCCSS-CCEEEEESC-------HH
T ss_pred             -HHHHHHHHHHcCCEEEEECcccccCccCCee---ccccc----CEEEEeCCCCccCCcCC-ceEEEEeCC-------HH
Confidence             7888888999999999999998753 32221   11111    3888998  79999889 999999853       46


Q ss_pred             HHHHHhhhhcc-------------ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceee-CCCCc
Q 019298          271 VVERMKKYFDI-------------LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINF-KSTGS  336 (343)
Q Consensus       271 ~~~~l~~~~~~-------------~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~-~~~~g  336 (343)
                      ++++++.....             .+..+++..+++ .+.+....   +..++.+++++.+.+.|+++||+.+. .|+++
T Consensus       231 ~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~-~~~l~~~~---~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~  306 (399)
T 2oga_A          231 LAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVL-RIRLAHLD---SWNGRRSALAAEYLSGLAGLPGIGLPVTAPDT  306 (399)
T ss_dssp             HHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHH-HHHHHTHH---HHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTE
T ss_pred             HHHHHHHHHhcCccccccccccccCCCcCHHHHHHH-HHHHHHHH---HHHHHHHHHHHHHHHHhccCCCccccCCCCCC
Confidence            77777655321             123455655555 33333222   24555666778888899888888753 46677


Q ss_pred             eEeee
Q 019298          337 SLKYL  341 (343)
Q Consensus       337 ~~~~~  341 (343)
                      +++|+
T Consensus       307 ~~~~~  311 (399)
T 2oga_A          307 DPVWH  311 (399)
T ss_dssp             ECCCS
T ss_pred             cceeE
Confidence            77763

>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*

Probab=99.95  E-value=3e-26  Score=209.64  Aligned_cols=258  Identities=16%  Similarity=0.058  Sum_probs=182.1

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCC-----CC----CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAPT-----AG----LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS  121 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~-----~g----~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~  121 (343)
                      .++++.+.+++.+.+...  ..++..     .+    ..++++.+++++      +++++++++++|+++++..+++++.
T Consensus        10 ~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~i~~~~g~~~a~~~~~~~~~   81 (382)
T 4hvk_A           10 KPVDERILEAMLPYMTES--FGNPSSVHSYGFKAREAVQEAREKVAKLV------NGGGGTVVFTSGATEANNLAIIGYA   81 (382)
T ss_dssp             CCCCHHHHHHHHHHHHTS--CCCTTCSSHHHHHHHHHHHHHHHHHHHHT------TCTTEEEEEESSHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHhh--cCCCcccchHHHHHHHHHHHHHHHHHHHc------CCCcCeEEEECCchHHHHHHHHHhh
Confidence            457889999999988652  122221     11    125666666665      3467899999999999999999987


Q ss_pred             ----CCCCeEEEeCCCCcchHHHHHh---cCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298          122 ----RPGANILLPRPGFPIYELSAAF---RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (343)
Q Consensus       122 ----~~gd~vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~  194 (343)
                          ++||+|+++.++|+++...+..   .|.+++.++++  .++.+|+++|+++++++++++++++|+||||.+++   
T Consensus        82 ~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---  156 (382)
T 4hvk_A           82 MRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVG--KYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP---  156 (382)
T ss_dssp             HHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBC--TTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---
T ss_pred             hhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccC--CCCCcCHHHHHHHhccCceEEEEECCCCCceeeCC---
Confidence                8999999999999988775554   59999999876  34579999999999988999999999999999977   


Q ss_pred             HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (343)
Q Consensus       195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~  274 (343)
                      +++|.++|++||+ +|+|++|+....    ......   .+..++++|+||.+|..|  +|+++++++..+.   .....
T Consensus       157 ~~~i~~l~~~~~~-li~D~a~~~~~~----~~~~~~---~~~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~---~~~~~  223 (382)
T 4hvk_A          157 VEEISEVLAGKAA-LHIDATASVGQI----EVDVEK---IGADMLTISSNDIYGPKG--VGALWIRKEAKLQ---PVILG  223 (382)
T ss_dssp             HHHHHHHHSSSSE-EEEECTTTBTTB----CCCHHH---HTCSEEEEESGGGTSCTT--CEEEEEETTCCCC---CSSCS
T ss_pred             HHHHHHHHHHcCE-EEEEhHHhcCCC----CCCchh---cCCCEEEEeHHHhcCCCc--eEEEEEcCccCcC---ccccc
Confidence            5688888999999 999999875221    111111   124599999999877666  7777776533111   00000


Q ss_pred             Hh-hhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCC
Q 019298          275 MK-KYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTG  335 (343)
Q Consensus       275 l~-~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~  335 (343)
                      .. ......+.++...+.++ .+++....++++ .+++++++++.+.+.|+.+||+.+..+.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~-~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~  285 (382)
T 4hvk_A          224 GGQENGLRSGSENVPSIVGF-GKAAEITAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPE  285 (382)
T ss_dssp             SCTGGGTSCSCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSS
T ss_pred             CCCcCccccCCcCHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCcc
Confidence            00 00011234455555555 444443233444 88899999999999999998988755553

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3

Probab=99.95  E-value=1e-26  Score=211.61  Aligned_cols=271  Identities=10%  Similarity=0.077  Sum_probs=194.5

Q ss_pred             ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-C-CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP-T-AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~-~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      ++++|+.| |     .+.++.+.+++.+.+.    +.|+. . .+..++|+.++++++    .+.+++++++|+|+++++
T Consensus         4 ~~~~~~~g-p-----~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~g----~~~~~~~v~~~~g~t~a~   69 (366)
T 1m32_A            4 NYLLLTPG-P-----LTTSRTVKEAMLFDSC----TWDDDYNIGVVEQIRQQLTALAT----ASEGYTSVLLQGSGSYAV   69 (366)
T ss_dssp             -CEECSSS-S-----CCCCHHHHHTTCCCCC----TTSHHHHTTTHHHHHHHHHHHHC----SSSSEEEEEEESCHHHHH
T ss_pred             ccccccCC-C-----cCCCHHHHHHHhhhhc----CCCHHHHHHHHHHHHHHHHHHhC----CCCcCcEEEEecChHHHH
Confidence            35888888 3     3467888888776431    22321 1 577899999999983    122345899999999999


Q ss_pred             HHHHHHhcCCCCeEEEeC-CCCcc-hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC--CceEEEEeCCCCCcccc
Q 019298          114 DVAMALLSRPGANILLPR-PGFPI-YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ--NTVALVIINPGNPCGNV  189 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~-p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~~~i~~~~p~nptG~~  189 (343)
                      ..+++++.++||+|++.+ ++|+. +...+...|.+++.++++.  ++.+|+++|++++++  +++++++++|+||||.+
T Consensus        70 ~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~  147 (366)
T 1m32_A           70 EAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGE--VARPDVQAIDAILNADPTISHIAMVHSETTTGML  147 (366)
T ss_dssp             HHHHHHSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCT--TSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEE
T ss_pred             HHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhcCCCeEEEEEecccCCccee
Confidence            999999999999988776 55654 5567778899999998753  456899999998875  47888999999999999


Q ss_pred             cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCch
Q 019298          190 YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP  269 (343)
Q Consensus       190 ~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~  269 (343)
                      ++   +++|.++|++||+++|+|++|+.....    ..   +...+.+++++|+||+++. +.++||+++++        
T Consensus       148 ~~---l~~i~~l~~~~~~~li~Dea~~~~~~~----~~---~~~~~~di~~~s~~K~~~~-~~g~G~~~~~~--------  208 (366)
T 1m32_A          148 NP---IDEVGALAHRYGKTYIVDAMSSFGGIP----MD---IAALHIDYLISSANKCIQG-VPGFAFVIARE--------  208 (366)
T ss_dssp             CC---HHHHHHHHHHHTCEEEEECTTTTTTSC----CC---TTTTTCSEEEEESSSTTCC-CSSEEEEEEEH--------
T ss_pred             cC---HHHHHHHHHHcCCEEEEECCccccCcC----cc---ccccCccEEEecCcccccC-CCceEEEEECH--------
Confidence            88   678889999999999999999854321    11   1222355999999998633 23479999964        


Q ss_pred             HHHHHHhhhh------------------cc-ccCcchHHHHHHHhccchhhHHH---HHHHHHHHHHHHHHHHhhcCCCC
Q 019298          270 KVVERMKKYF------------------DI-LGDPATFIQVCIMYGCLSTIMQI---MIHGNFLENFAGSCVPSYKLIPE  327 (343)
Q Consensus       270 ~~~~~l~~~~------------------~~-~~~~~~~~~~a~~~~~l~~~~~~---l~~~~~~~~~~~~~~~~L~~~~g  327 (343)
                      +++++++...                  .. .++++...+.++ .+++....++   -+.+++++++++.+.+.|+++ |
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~  286 (366)
T 1m32_A          209 QKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAF-AQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-G  286 (366)
T ss_dssp             HHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHH-HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred             HHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHH-HHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC-C
Confidence            4555443210                  00 135566666555 5555443333   337888899999999999888 7


Q ss_pred             ceeeCC---CCceEeeecC
Q 019298          328 LINFKS---TGSSLKYLDL  343 (343)
Q Consensus       328 ~~~~~~---~~g~~~~~~l  343 (343)
                      +.+..+   .+++++|+++
T Consensus       287 ~~~~~~~~~~~~~~~~~~~  305 (366)
T 1m32_A          287 FNTLLDDELHSPIITAFYS  305 (366)
T ss_dssp             CCBSSCGGGBCSSEEEEEC
T ss_pred             CeeccCchhcCceEEEEEc
Confidence            776554   4677888753

>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*

Probab=99.95  E-value=8.2e-27  Score=213.76  Aligned_cols=258  Identities=12%  Similarity=0.097  Sum_probs=186.1

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCC--CcEEEecChHHHHHHHHHHhcCCCCe
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAP--TAGLPLTRRAIAEYLSRDLPYKLTP--NDVFVTSGCTQAIDVAMALLSRPGAN  126 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~~~~~~~~~~~~--~~i~~~~g~~~al~~~~~~l~~~gd~  126 (343)
                      .++++.+.+++.+.+..    .+.+  .....++++.+++++      +.++  +++++|+|+++++. ++..++++||+
T Consensus        11 ~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~la~~~------~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~   79 (384)
T 3zrp_A           11 TTIKEDVLVAGLENNVG----FTSKEFVEALAYSLKGLRYVM------GASKNYQPLIIPGGGTSAME-SVTSLLKPNDK   79 (384)
T ss_dssp             SCCCHHHHHHTTCCSCC----TTSHHHHHHHHHHHHHHHHHH------TCCTTSEEEEEESCHHHHHH-HGGGGCCTTCE
T ss_pred             CCCCHHHHHHhhccccc----cccHHHHHHHHHHHHHHHHHh------CCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCE
Confidence            56788888877665432    1221  223456677777776      3344  88999999999999 99999999999


Q ss_pred             EEEeCCCCcc--hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHh
Q 019298          127 ILLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETAN  203 (343)
Q Consensus       127 vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~  203 (343)
                      |++++|+|.+  +...++..|.+++.++++.  ++.+|++++++.+++ +++++++++|+||||.+++   +++|.++|+
T Consensus        80 vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~  154 (384)
T 3zrp_A           80 ILVVSNGVFGDRWEQIFKRYPVNVKVLRPSP--GDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREP---VKDVINKIR  154 (384)
T ss_dssp             EEEECSSHHHHHHHHHHTTSSCEEEEECCST--TCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECC---HHHHHHHHG
T ss_pred             EEEecCCcchHHHHHHHHHcCCcEEEecCCC--CCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECc---HHHHHHHHH
Confidence            9999999965  5566677899999998764  456899999999987 7899999999999999987   678899999


Q ss_pred             hcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHH--------
Q 019298          204 KLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM--------  275 (343)
Q Consensus       204 ~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l--------  275 (343)
                      +||+++|+|++|......    ..+   ...+..+++.|+||+++. +.++||+++++        ++++++        
T Consensus       155 ~~~~~li~D~a~~~~~~~----~~~---~~~~~d~~~~s~~K~~~~-~~g~g~~~~~~--------~~~~~~~~~~~~~~  218 (384)
T 3zrp_A          155 KYVELIVVDGVSSVGAEE----VKA---EEWNVDVYLTASQKALGS-AAGLGLLLLSP--------KALSILDSQNSIAG  218 (384)
T ss_dssp             GGEEEEEEECTTTTTTSC----CCT---TTTTCSEEEEETTSTTCC-CSSEEEEEECH--------HHHHHHHHCCCSCC
T ss_pred             hcCCEEEEECcccccCcc----ccc---cccCCCEEEecCcccccC-CCceEEEEECH--------HHHHHhcCCCCCCc
Confidence            999999999998853211    111   222345999999998743 24489999853        566665        


Q ss_pred             -----hhhh----------ccc-cCcchHHHHHHHhccchhhHHH-H-HHHHHHHHHHHHHHHhhcCCCCceeeCCC---
Q 019298          276 -----KKYF----------DIL-GDPATFIQVCIMYGCLSTIMQI-M-IHGNFLENFAGSCVPSYKLIPELINFKST---  334 (343)
Q Consensus       276 -----~~~~----------~~~-~~~~~~~~~a~~~~~l~~~~~~-l-~~~~~~~~~~~~~~~~L~~~~g~~~~~~~---  334 (343)
                           ....          ... +.++...+.++ .+++...... + +.+++++++++.+.+.|+++ |+.+..+.   
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~  296 (384)
T 3zrp_A          219 YYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQL-AEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GLEIVARRPES  296 (384)
T ss_dssp             STTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHH-HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSCSSGGG
T ss_pred             ccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCeEccCcccc
Confidence                 1111          111 24455555544 4444432222 2 38888999999999999988 88876666   


Q ss_pred             -CceEeeec
Q 019298          335 -GSSLKYLD  342 (343)
Q Consensus       335 -~g~~~~~~  342 (343)
                       +++++|++
T Consensus       297 ~~~~~~~~~  305 (384)
T 3zrp_A          297 YSNTVTGVI  305 (384)
T ss_dssp             BCSSEEEEE
T ss_pred             cCccEEEEE
Confidence             56776664

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*

Probab=99.95  E-value=4.5e-26  Score=208.63  Aligned_cols=263  Identities=14%  Similarity=0.064  Sum_probs=181.9

Q ss_pred             cc-ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           34 EK-KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        34 ~~-~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      +. +++|++.+.+.    .++++.+++++.         .|..   ...+++.++++..+.+|.. +++++++++|++++
T Consensus        26 g~~~v~~~~~~~~~----~~~~~~v~~a~~---------~~~~---~~~~~~~~~~~~a~~~g~~-~~~~~~~~~ggt~a   88 (374)
T 2aeu_A           26 GRDALYDLSGLSGG----FLIDEKDKALLN---------TYIG---SSYFAEKVNEYGLKHLGGD-ENDKCVGFNRTSSA   88 (374)
T ss_dssp             CGGGCEECSSCCCC----CCCCHHHHHHHT---------STTH---HHHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHH
T ss_pred             CccceeeecccCCC----CCCCHHHHHHHH---------HhcC---chHHHHHHHHHHHHHhCCC-CcceEEEEcChHHH
Confidence            55 78999998743    678898888875         1211   1345566666665544432 35789999999999


Q ss_pred             HHHHHHHhcCCCCeEEEeCCCCcchHH---HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceE-EEEeCCCCCccc
Q 019298          113 IDVAMALLSRPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA-LVIINPGNPCGN  188 (343)
Q Consensus       113 l~~~~~~l~~~gd~vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~-i~~~~p~nptG~  188 (343)
                      +..+++++  +||+|+++.|+|+++..   .++..|.+++.+         .|++++++. ++++++ +++++|+||||.
T Consensus        89 ~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v---------~d~~~l~~~-~~~~~~~v~~~~p~nptG~  156 (374)
T 2aeu_A           89 ILATILAL--KPKKVIHYLPELPGHPSIERSCKIVNAKYFES---------DKVGEILNK-IDKDTLVIITGSTMDLKVI  156 (374)
T ss_dssp             HHHHHHHH--CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE---------SCHHHHHTT-CCTTEEEEEECBCTTSCBC
T ss_pred             HHHHHHhC--CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe---------CCHHHHHhc-CCCccEEEEEccCCCCCCC
Confidence            99999988  99999999998876443   567789888776         278999988 778899 899999999996


Q ss_pred             ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCc
Q 019298          189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK  268 (343)
Q Consensus       189 ~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~  268 (343)
                        +.+++++|.++|++||+++|+|++|+.+..+.....+....   +.+++++|+||.  ++|+|+||++++        
T Consensus       157 --~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~---~~di~~~S~sK~--l~g~~~G~~~~~--------  221 (374)
T 2aeu_A          157 --ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKL---GADLVVTSTDKL--MEGPRGGLLAGK--------  221 (374)
T ss_dssp             --CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHH---TCSEEEEETTSS--SSSCSCEEEEEE--------
T ss_pred             --CcccHHHHHHHHHHcCCEEEEECCcccccccccccCCcccc---CCcEEEecCccc--ccCcceEEEEEC--------
Confidence              66899999999999999999999998764200000001111   234899999999  457899999885        


Q ss_pred             hHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHH-HHH-HHHHHHHH----HHHHHHhhcCC---CCcee-eCCCCce
Q 019298          269 PKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQ-IMI-HGNFLENF----AGSCVPSYKLI---PELIN-FKSTGSS  337 (343)
Q Consensus       269 ~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~-~l~-~~~~~~~~----~~~~~~~L~~~---~g~~~-~~~~~g~  337 (343)
                      ++++++++..... ..+++++.+.++ ..+|..... .++ ..+..+..    ++.+.+.|..+   +|+.+ ..|.|.+
T Consensus       222 ~~~~~~l~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~  300 (374)
T 2aeu_A          222 KELVDKIYIEGTKFGLEAQPPLLAGI-YRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFV  300 (374)
T ss_dssp             HHHHHHHHHHHHTTTCBCCHHHHHHH-HHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEE
T ss_pred             HHHHHHHHHhhccccCCCCHHHHHHH-HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEE
Confidence            4788888776542 335677777777 455543211 111 22222222    45555656554   35664 4566666


Q ss_pred             Eeee
Q 019298          338 LKYL  341 (343)
Q Consensus       338 ~~~~  341 (343)
                      |.|.
T Consensus       301 ~~~~  304 (374)
T 2aeu_A          301 IKRV  304 (374)
T ss_dssp             EEEE
T ss_pred             EEee
Confidence            6665

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*

Probab=99.95  E-value=5.6e-26  Score=211.79  Aligned_cols=284  Identities=16%  Similarity=0.119  Sum_probs=188.9

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCC---CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF---NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~  109 (343)
                      +..++|++.+.+..  .++ .+|.+.+++.+++.....   ..|+. ....++++.+++++      ++++++|++++|+
T Consensus        42 g~~ylD~~~~~~~~--~lg~~~p~v~~a~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~------~~~~~~v~~~~gg  112 (429)
T 1s0a_A           42 GRRLVDGMSSWWAA--IHGYNHPQLNAAMKSQIDAMSHVMFGGITH-APAIELCRKLVAMT------PQPLECVFLADSG  112 (429)
T ss_dssp             SCEEEESSTTTTTC--TTCBSCHHHHHHHHHHHHHCSCCCCSSEEC-HHHHHHHHHHHHHS------CTTCCEEEEESSH
T ss_pred             CCEEEEcCccHhhc--cCCCCCHHHHHHHHHHHHhcccccccccCC-HHHHHHHHHHHHhC------CCCCCEEEEeCCH
Confidence            56788998887532  233 589999999998865321   13332 12345666666665      3578999999999


Q ss_pred             HHHHHHHHHHhc---C----CCCeEEEeCCCCcchHHHHHhc-C-------------ceeEEeecCC---CCCC-CCCHH
Q 019298          110 TQAIDVAMALLS---R----PGANILLPRPGFPIYELSAAFR-H-------------IEVRHFDLLP---DKGW-EVDLD  164 (343)
Q Consensus       110 ~~al~~~~~~l~---~----~gd~vl~~~p~~~~~~~~~~~~-g-------------~~~~~~~~~~---~~~~-~~d~~  164 (343)
                      ++++..+++.+.   +    +||+|++.+|+|+.+...+... +             .++..++...   ++.+ .+|++
T Consensus       113 tea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  192 (429)
T 1s0a_A          113 SVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMV  192 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGH
T ss_pred             HHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHH
Confidence            999999998653   2    6899999999998765433221 1             1234444321   1123 47899


Q ss_pred             HHHhhhcC--CceEEEEeCC--CCCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEE
Q 019298          165 DIESLADQ--NTVALVIINP--GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT  239 (343)
Q Consensus       165 ~l~~~~~~--~~~~i~~~~p--~nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~  239 (343)
                      +|++++++  ....+++++|  +||||. ..+.+++++|.++|++||+++|+||+|.++.+.+.. ..+...+...+++ 
T Consensus       193 ~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~-~~~~~~~~~~d~~-  270 (429)
T 1s0a_A          193 GFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKL-FACEHAEIAPDIL-  270 (429)
T ss_dssp             HHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSEE-
T ss_pred             HHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchH-HHhhhcCCCCCEE-
Confidence            99998863  3344566677  589996 567888999999999999999999999987554331 1222222222333 


Q ss_pred             EccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhh------hccccCcchHHHHHHHhccchhhHHHHHHHHHHH
Q 019298          240 LGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY------FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLE  312 (343)
Q Consensus       240 ~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~  312 (343)
                        |+||.|+ +| +|+||++++        +++++.+...      ...+++.+++++.++ .++|+...+ .+..++++
T Consensus       271 --t~sK~l~-~G~~~iG~~~~~--------~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~-~aal~~~~~-~~~~~~~~  337 (429)
T 1s0a_A          271 --CLGKALT-GGTMTLSATLTT--------REVAETISNGEAGCFMHGPTFMGNPLACAAA-NASLAILES-GDWQQQVA  337 (429)
T ss_dssp             --EECGGGG-TSSSCCEEEEEC--------HHHHHHHHTSTTSSCSCCCTTTTCHHHHHHH-HHHHHHHHT-CHHHHHHH
T ss_pred             --Eeccccc-CCCccceEEEeC--------HHHHHHhhcCCCcccccCCCCCCCHHHHHHH-HHHHHHHHh-CCHHHHHH
Confidence              7899987 58 999999985        3677877653      223456788888777 455432111 12567777


Q ss_pred             HHHHHHHHhhcCC---CCceeeCCCCceEeeec
Q 019298          313 NFAGSCVPSYKLI---PELINFKSTGSSLKYLD  342 (343)
Q Consensus       313 ~~~~~~~~~L~~~---~g~~~~~~~~g~~~~~~  342 (343)
                      ++++.+.+.|+++   |++....++ |+|+|++
T Consensus       338 ~~~~~l~~~L~~l~~~~~~~~~~~~-g~~~~~~  369 (429)
T 1s0a_A          338 DIEVQLREQLAPARDAEMVADVRVL-GAIGVVE  369 (429)
T ss_dssp             HHHHHHHHHHGGGGGCTTEEEEEEE-TTEEEEE
T ss_pred             HHHHHHHHHHHHHhcCCCEEEEEEe-eEEEEEE
Confidence            8888888888764   555533444 5677775

>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}

Probab=99.95  E-value=2.9e-27  Score=218.26  Aligned_cols=275  Identities=13%  Similarity=0.050  Sum_probs=186.3

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCCCC----CCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF---NGYAPT----AGLPLTRRAIAEYLSRDLPYKLTPNDVFV  105 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~Y~~~----~g~~~lr~~ia~~~~~~~~~~~~~~~i~~  105 (343)
                      +..+.|.|+.+.+     .++++.+.+++.+++.....   ..|...    ....++++.+++++      ++++++|++
T Consensus        17 ~~~~~iyld~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~~~~v~~   85 (400)
T 3vax_A           17 RGSHMTYLDAAAT-----TRVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTV------SAEPDELIF   85 (400)
T ss_dssp             -----CCCCCCCC-----SSSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHT------TCCGGGEEE
T ss_pred             ccCCcEEecCCCC-----CCCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHc------CCCCCcEEE
Confidence            3566777877763     35789999999888763210   011111    12345666666665      346789999


Q ss_pred             ecChHHHHHHHHHHhc----CCCC-eEEEeCCCCcchHHHHHh---cCceeEEeecCCCCCCCCCHHHHHhhhcCCceEE
Q 019298          106 TSGCTQAIDVAMALLS----RPGA-NILLPRPGFPIYELSAAF---RHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL  177 (343)
Q Consensus       106 ~~g~~~al~~~~~~l~----~~gd-~vl~~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i  177 (343)
                      |+|+++++..+++++.    ++|| +|+++.++|+++...+..   .|.+++.++++.  ++.+|+++|+++++++++++
T Consensus        86 ~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v  163 (400)
T 3vax_A           86 TSGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGP--SGRISVEGVMERLRPDTLLV  163 (400)
T ss_dssp             ESCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCT--TCCCCHHHHHTTCCTTEEEE
T ss_pred             eCCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCC--CCCcCHHHHHHhcCCCceEE
Confidence            9999999999999987    8999 999999999887665544   588999888754  56789999999999889999


Q ss_pred             EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEE
Q 019298          178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF  257 (343)
Q Consensus       178 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i  257 (343)
                      ++++|+||||.+++   +++|.++|+++|+++|+|++|+...    ....+...    ..+++.|+||.++..|  +|++
T Consensus       164 ~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~----~~~~~~~~----~d~~~~s~~K~~g~~g--~g~~  230 (400)
T 3vax_A          164 SLMHVNNETGVIQP---VAELAQQLRATPTYLHVDAAQGYGK----VPGDLTTP----IDMISISGHKIGAPKG--VGAL  230 (400)
T ss_dssp             ECCSBCTTTCBBCC---HHHHHHHHTTSSCEEEEECTTTTTT----SGGGGGSC----CSEEEEETGGGTSCSS--CEEE
T ss_pred             EEECCCCCceeeCc---HHHHHHHHHhcCCEEEEEhhhhcCC----CCcChhhc----CcEEEEeHHHhCCCCc--eEEE
Confidence            99999999999977   5788889999999999999998522    11112111    3489999999876665  6777


Q ss_pred             E-EeCCCCCCCchHHHHHHh---hh-hccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceee
Q 019298          258 V-TTDPCGMFRKPKVVERMK---KY-FDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINF  331 (343)
Q Consensus       258 ~-~~~~~~~~~~~~~~~~l~---~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~  331 (343)
                      + ++++........+...+.   .. ....+..+...+.++ .+++....++++ .+++++++++.+.+.|+ .+|+.+.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~  308 (400)
T 3vax_A          231 VTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGL-AEAAKIFEAEHAQWQVAAQDLRSRLLAGLA-STSFQVN  308 (400)
T ss_dssp             EECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHH-HHHHHHHHHSHHHHHHHHHHHHHHHHHHHT-TTTCEEC
T ss_pred             EEecchhccccccccCceecCCCceeeeecCCCCHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHhhC-CCCEEEe
Confidence            7 665211100000000000   00 111334455555555 444443233333 88889999999999999 8898876


Q ss_pred             CCCC
Q 019298          332 KSTG  335 (343)
Q Consensus       332 ~~~~  335 (343)
                      .+++
T Consensus       309 ~~~~  312 (400)
T 3vax_A          309 GDQD  312 (400)
T ss_dssp             SCTT
T ss_pred             CCcc
Confidence            6654

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}

Probab=99.95  E-value=2.9e-26  Score=213.85  Aligned_cols=286  Identities=14%  Similarity=0.091  Sum_probs=182.5

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      ++.++||+.+.+.  ..++ .+|.+.+++.+++...  ..|.+..+..+.++++++++.+.++  .+.++|++++|++++
T Consensus        28 g~~~lD~~~~~~~--~~lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ea  101 (430)
T 3i4j_A           28 GRRYLDGSSGALV--ANIGHGRAEVGERMAAQAARL--PFVHGSQFSSDVLEEYAGRLARFVG--LPTFRFWAVSGGSEA  101 (430)
T ss_dssp             SCEEEETTHHHHT--CTTCBCCHHHHHHHHHHHHHC--CCCCTTTCEEHHHHHHHHHHHHHTT--CTTCEEEEESSHHHH
T ss_pred             CCEEEECCCchhc--cccCCCCHHHHHHHHHHHHhc--ccccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCcHHHH
Confidence            6788999988543  2244 4899999999988753  2344434556777777777776554  467799999999999


Q ss_pred             HHHHHHHhc--------CCCCeEEEeCCCCcchHHHHHhcCce---------------eEEeecCCCCC---CCCCHHHH
Q 019298          113 IDVAMALLS--------RPGANILLPRPGFPIYELSAAFRHIE---------------VRHFDLLPDKG---WEVDLDDI  166 (343)
Q Consensus       113 l~~~~~~l~--------~~gd~vl~~~p~~~~~~~~~~~~g~~---------------~~~~~~~~~~~---~~~d~~~l  166 (343)
                      +..+++.+.        ..++.|++.+|+|+++...+...+..               +..++..  +.   ...|+++|
T Consensus       102 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l  179 (430)
T 3i4j_A          102 TESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKP--DPARNGAEDAEGL  179 (430)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCC--CTTSCHHHHHTHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCC--cccchhhHHHHHH
Confidence            999999886        34789999999999877655444332               1222211  11   12356888


Q ss_pred             HhhhcC---CceEEEEeCC-CC-Cccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccccc-CCCCCEEE
Q 019298          167 ESLADQ---NTVALVIINP-GN-PCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILT  239 (343)
Q Consensus       167 ~~~~~~---~~~~i~~~~p-~n-ptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~-~~~~~~i~  239 (343)
                      ++.++.   +..++++++| +| ++|. .++.+++++|.++|++||+++|+||+|.++.+.+.. .....+ +...++  
T Consensus       180 e~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~-~~~~~~~~~~~di--  256 (430)
T 3i4j_A          180 RALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSP-LALSRWSGVTPDI--  256 (430)
T ss_dssp             HHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGTTTCCCSE--
T ss_pred             HHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccch-hhhhhhcCCCCcE--
Confidence            888763   4456666677 56 8887 578888999999999999999999999988665542 222222 222233  


Q ss_pred             EccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhh-----hccccCcchHHHHHHHhccchhh--HHHHH-HHHH
Q 019298          240 LGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY-----FDILGDPATFIQVCIMYGCLSTI--MQIMI-HGNF  310 (343)
Q Consensus       240 ~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~~~l~~~--~~~l~-~~~~  310 (343)
                       .+|||+++. | +|+||++++        +++++.+...     ...+++.++++++++ .++|+..  .++.+ .++.
T Consensus       257 -~t~sK~l~~-G~~r~G~~~~~--------~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa-~aal~~~~~~~~~~~~~~~  325 (430)
T 3i4j_A          257 -AVLGKGLAA-GYAPLAGLLAA--------PQVYETVMGGSGAFMHGFTYAGHPVSVAAG-LSVLDIVEREDLTGAAKER  325 (430)
T ss_dssp             -EEECGGGTT-TSSCCEEEEEC--------HHHHHHHHHTTCBCCCCCTTTTCHHHHHHH-HHHHHHHHHTTHHHHHHHH
T ss_pred             -EEEcccccC-CccccEEEEEC--------HHHHHHHhccCCcccccCCCCCCHHHHHHH-HHHHHHHHcccHHHHHHHH
Confidence             368999885 9 999999984        4788888763     334567888988888 5655531  22222 3333


Q ss_pred             HHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298          311 LENFAGSCVPSYKLIPELINFKSTGSSLKYLD  342 (343)
Q Consensus       311 ~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~  342 (343)
                      .+..++.+.+.+..+|++....+. |+|+|++
T Consensus       326 ~~~~~~~l~~~~~~~~~~~~~~~~-g~~~~~~  356 (430)
T 3i4j_A          326 GAQLLAGLQALQARFPQMMQVRGT-GLLLGVV  356 (430)
T ss_dssp             HHHHHHHHHHHHHHCTTEEEEEEE-TTEEEEE
T ss_pred             HHHHHHHHHHHHHhCCCeEEEEEE-EEEEEEE
Confidence            333444444444456666654444 4566554

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*

Probab=99.95  E-value=9.2e-27  Score=214.69  Aligned_cols=284  Identities=17%  Similarity=0.089  Sum_probs=188.8

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  110 (343)
                      +..++||+.+.+.  +.++ +++.+.+++.+++.....  ..| +.....++++.+++++      ++++++|++++|++
T Consensus        44 g~~~ld~~~~~~~--~~~g~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~------~~~~~~v~~~~gg~  114 (395)
T 1vef_A           44 GNEYIDCVGGYGV--ANLGHGNPEVVEAVKRQAETLMAMPQTL-PTPMRGEFYRTLTAIL------PPELNRVFPVNSGT  114 (395)
T ss_dssp             SCEEEESSHHHHT--CTTCBTCHHHHHHHHHHHHHCCCCCTTS-CCHHHHHHHHHHHHTS------CTTEEEEEEESSHH
T ss_pred             CCEEEEccCcccc--ccCCCCCHHHHHHHHHHHHhCCCCcccc-CCHHHHHHHHHHHHhc------CCCcCEEEEcCcHH
Confidence            5678899888643  1244 789999999998865321  123 2223445555555554      34678999999999


Q ss_pred             HHHHHHHHHhc--CCCCeEEEeCCCCcch-HHHHHhcCceeEE---eecCCCCC--CCCCHHHHHhhhcCCceEEEEeCC
Q 019298          111 QAIDVAMALLS--RPGANILLPRPGFPIY-ELSAAFRHIEVRH---FDLLPDKG--WEVDLDDIESLADQNTVALVIINP  182 (343)
Q Consensus       111 ~al~~~~~~l~--~~gd~vl~~~p~~~~~-~~~~~~~g~~~~~---~~~~~~~~--~~~d~~~l~~~~~~~~~~i~~~~p  182 (343)
                      +++..+++++.  .+|+.|++.+|+|+.. ...+...|.+...   .++..+..  ...|+++|++++++++++++++.+
T Consensus       115 ~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~  194 (395)
T 1vef_A          115 EANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDEETAAVILEPV  194 (395)
T ss_dssp             HHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCTTEEEEEECSE
T ss_pred             HHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhccCEEEEEEeCc
Confidence            99999998764  5788999999999654 4455556654211   11110000  014899999999877777765555


Q ss_pred             CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298          183 GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (343)
Q Consensus       183 ~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~  261 (343)
                      +||||.+. +.+++++|.++|++||+++|+||+|.++.+.+... .+...+...+++   ||||.|+. |+|+||+++++
T Consensus       195 ~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~-~~~~~~~~~d~~---s~sK~~~~-g~~~G~~~~~~  269 (395)
T 1vef_A          195 QGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRF-AFEHFGIVPDIL---TLAKALGG-GVPLGVAVMRE  269 (395)
T ss_dssp             ETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE---EECGGGGT-TSSCEEEEEEH
T ss_pred             cCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchh-HhhhcCCCCCEE---EEcccccC-CCceEEEEehH
Confidence            78999875 68889999999999999999999999765443321 111122122333   88999987 99999999963


Q ss_pred             CCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCcee--eCCCCceE
Q 019298          262 PCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN--FKSTGSSL  338 (343)
Q Consensus       262 ~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~--~~~~~g~~  338 (343)
                              +++++++... ....+++++.+.++ .++|+.... .+.+++++++++.+.+.|++++. .+  ..+..|+|
T Consensus       270 --------~~~~~l~~~~~~~~~~~~~~~~~a~-~~al~~~~~-~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~g~~  338 (395)
T 1vef_A          270 --------EVARSMPKGGHGTTFGGNPLAMAAG-VAAIRYLER-TRLWERAAELGPWFMEKLRAIPS-PKIREVRGMGLM  338 (395)
T ss_dssp             --------HHHHTSCTTSSCCSSTTCHHHHHHH-HHHHHHHHH-HTTHHHHHHHHHHHHHHHHTSCC-TTEEEEEEETTE
T ss_pred             --------HHHhhhccCCcCCCcCCCHHHHHHH-HHHHHHHHh-CCHHHHHHHHHHHHHHHHHHhhc-CceEEEEEEEEE
Confidence                    5666665421 22446677777776 455543222 12677888899999999988732 21  12345678


Q ss_pred             eeec
Q 019298          339 KYLD  342 (343)
Q Consensus       339 ~~~~  342 (343)
                      +|++
T Consensus       339 ~~~~  342 (395)
T 1vef_A          339 VGLE  342 (395)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            8875

>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*

Probab=99.95  E-value=9.8e-27  Score=210.72  Aligned_cols=259  Identities=10%  Similarity=0.065  Sum_probs=186.4

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEE
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILL  129 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~  129 (343)
                      .++++.+.+++.+.+..   +.|+. ..+..++|+.++++++    ...+++++++|+|+++++..+++++.+  |+|++
T Consensus         9 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~g----~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~   79 (353)
T 2yrr_A            9 TPIPERVQKALLRPMRG---HLDPEVLRVNRAIQERLAALFD----PGEGALVAALAGSGSLGMEAGLANLDR--GPVLV   79 (353)
T ss_dssp             CCCCHHHHGGGGSCCCC---TTCHHHHHHHHHHHHHHHHHHC----CCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEE
T ss_pred             CCCCHHHHHHHhccccc---ccCHHHHHHHHHHHHHHHHHhC----CCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEE
Confidence            56788898888776543   22321 2345778888888873    223478999999999999999998876  89999


Q ss_pred             eCCCCcch--HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcC
Q 019298          130 PRPGFPIY--ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANKLK  206 (343)
Q Consensus       130 ~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~  206 (343)
                      ++|+|+++  ...++..|.+++.++.+.  ++.+|++++++.+++ +++++++++|+||||.+++   +++|.++|+++|
T Consensus        80 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~  154 (353)
T 2yrr_A           80 LVNGAFSQRVAEMAALHGLDPEVLDFPP--GEPVDPEAVARALKRRRYRMVALVHGETSTGVLNP---AEAIGALAKEAG  154 (353)
T ss_dssp             EECSHHHHHHHHHHHHTTCCEEEEECCT--TSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHHHHHHHT
T ss_pred             EcCCCchHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecC---HHHHHHHHHHcC
Confidence            99999874  455677899999998753  456999999999987 7899999999999999987   568888899999


Q ss_pred             cEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCcccc-CCCCCcEEEEEEeCCCCCCCchHHHHHHhh--------
Q 019298          207 TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWFVTTDPCGMFRKPKVVERMKK--------  277 (343)
Q Consensus       207 ~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~--------  277 (343)
                      +++|+|++|+...   . ...+..+   +..+++.|++|++ +.+|  +||+++++        +++++++.        
T Consensus       155 ~~li~D~a~~~~~---~-~~~~~~~---~~d~~~~s~~K~~~~~~g--~G~~~~~~--------~~~~~l~~~~~~~~~~  217 (353)
T 2yrr_A          155 ALFFLDAVTTLGM---L-PFSMRAM---GVDYAFTGSQKCLSAPPG--LAPIAASL--------EARKAFTGKRGWYLDL  217 (353)
T ss_dssp             CEEEEECTTTTTT---S-CCCHHHH---TCSEEECCTTSTTCCCSS--CEEEEECH--------HHHHHCCCCSCSTTCH
T ss_pred             CeEEEEcCccccc---c-ccccccc---CceEEEecCcccccCCCc--eEEEEECH--------HHHHHhccCCCccccH
Confidence            9999999996422   1 1122222   2348899999964 4466  69999853        56655541        


Q ss_pred             --------hhccccCcchHHHHHHHhccchhhHH--HHHHHHHHHHHHHHHHHhhcCCCCceeeCCC--CceEeeec
Q 019298          278 --------YFDILGDPATFIQVCIMYGCLSTIMQ--IMIHGNFLENFAGSCVPSYKLIPELINFKST--GSSLKYLD  342 (343)
Q Consensus       278 --------~~~~~~~~~~~~~~a~~~~~l~~~~~--~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~--~g~~~~~~  342 (343)
                              .....++++...+.++ .+++....+  +-+.+++++++++.+.+.|+++ |+.+..+.  +++++|++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~  292 (353)
T 2yrr_A          218 ARVAEHWERGGYHHTTPVLLHYAL-LEALDLVLEEGVAARERRAREVYAWVLEELKAR-GFRPYPKASPLPTVLVVR  292 (353)
T ss_dssp             HHHHHHHTTCCCSSCCCHHHHHHH-HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEESCSSSBCTTEEEEE
T ss_pred             HHHhhhhhcCCCCCCCCHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCccccCccCCCeEEEEE
Confidence                    0111335566666555 444443222  2237888999999999999888 88865554  56666664

>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*

Probab=99.95  E-value=3.1e-26  Score=211.08  Aligned_cols=259  Identities=10%  Similarity=0.064  Sum_probs=189.6

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeE
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAPT--AGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANI  127 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~v  127 (343)
                      .++++.+.+++.+.+.    ..|.+.  ....++|+.+++++      +.+++ +|++|+|+++++..++++++++||+|
T Consensus        27 ~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~------~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~v   96 (396)
T 2ch1_A           27 SNCSKRVLTAMTNTVL----SNFHAELFRTMDEVKDGLRYIF------QTENRATMCVSGSAHAGMEAMLSNLLEEGDRV   96 (396)
T ss_dssp             CCCCHHHHHHTTSCCC----CTTCHHHHHHHHHHHHHHHHHH------TCCCSCEEEESSCHHHHHHHHHHHHCCTTCEE
T ss_pred             CCCCHHHHHHhccccc----cCCChhHHHHHHHHHHHHHHHh------CCCCCcEEEECCcHHHHHHHHHHHhcCCCCeE
Confidence            5567888887766432    235432  23678999999999      44667 89999999999999999999999999


Q ss_pred             EEeCCCCcchH--HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298          128 LLPRPGFPIYE--LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (343)
Q Consensus       128 l~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~  204 (343)
                      ++++|+|..+.  ..++..|.+++.++++.  ++.+|++++++++++ ++++|++++|+||||.+++   +++|.++|++
T Consensus        97 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~  171 (396)
T 2ch1_A           97 LIAVNGIWAERAVEMSERYGADVRTIEGPP--DRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP---LEGVGQICHQ  171 (396)
T ss_dssp             EEEESSHHHHHHHHHHHHTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred             EEEcCCcccHHHHHHHHHcCCceEEecCCC--CCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecC---HHHHHHHHHH
Confidence            99999999884  36788899999998753  567999999999987 7899999999999999988   6788888999


Q ss_pred             cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh------
Q 019298          205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY------  278 (343)
Q Consensus       205 ~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~------  278 (343)
                      +|+++|+|++|...   .. +..+.   ..+..+++.|++|.++. +.++|++++++        ++++.++..      
T Consensus       172 ~~~~li~Dea~~~g---~~-~~~~~---~~~~d~~~~s~~K~~~~-~~g~g~~~~~~--------~~~~~~~~~~~~~~~  235 (396)
T 2ch1_A          172 HDCLLIVDAVASLC---GV-PFYMD---KWEIDAVYTGAQKVLGA-PPGITPISISP--------KALDVIRNRRTKSKV  235 (396)
T ss_dssp             TTCEEEEECTTTBT---TB-CCCTT---TTTCCEEECCCC-CCCC-CSSCEEEEECH--------HHHHHHHTCSSCCSC
T ss_pred             cCCEEEEEcccccc---CC-ccchh---hcCcCEEEEcCCccccC-CCCeEEEEECH--------HHHHhhhhccCcccc
Confidence            99999999999842   11 11222   22234778999997543 24469998853        566665431      


Q ss_pred             ------------------hccccCcchHHHHHHHhccchhh-HHHH-HHHHHHHHHHHHHHHhhcCCCCceeeCCCCc--
Q 019298          279 ------------------FDILGDPATFIQVCIMYGCLSTI-MQIM-IHGNFLENFAGSCVPSYKLIPELINFKSTGS--  336 (343)
Q Consensus       279 ------------------~~~~~~~~~~~~~a~~~~~l~~~-~~~l-~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g--  336 (343)
                                        ....++++...+.++ .++|... .+.+ +.+++++++++.+.+.|+++ |+.+..++++  
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~  313 (396)
T 2ch1_A          236 FYWDLLLLGNYWGCYDEPKRYHHTVASNLIFAL-REALAQIAEEGLENQIKRRIECAQILYEGLGKM-GLDIFVKDPRHR  313 (396)
T ss_dssp             GGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHH-HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCBSSCSGGGB
T ss_pred             eEechHHHHHhhhhhcccCCCCCCCcHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCeeccCCcccc
Confidence                              011234566666666 4555432 1223 37888999999999999988 8887666653  


Q ss_pred             --eEeeec
Q 019298          337 --SLKYLD  342 (343)
Q Consensus       337 --~~~~~~  342 (343)
                        .++|++
T Consensus       314 ~~~~~~~~  321 (396)
T 2ch1_A          314 LPTVTGIM  321 (396)
T ss_dssp             CTTEEEEE
T ss_pred             CCceEEEE
Confidence              366654

>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*

Probab=99.94  E-value=2.1e-26  Score=214.74  Aligned_cols=260  Identities=14%  Similarity=0.077  Sum_probs=174.8

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC---------CCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTA---------GLPLTRRAIAEYLSRDLPYKLTPNDVFV  105 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~---------g~~~lr~~ia~~~~~~~~~~~~~~~i~~  105 (343)
                      .+.+.|+.+.+     .++++.+++++.+++..  ...|+...         ...++|+.+++++      ++++++|++
T Consensus        17 ~~~~~Ld~~~~-----~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~   83 (432)
T 3a9z_A           17 NRKVYMDYNAT-----TPLEPEVIQAVTEAMKE--AWGNPSSSYVAGRKAKDIINTARASLAKMI------GGKPQDIIF   83 (432)
T ss_dssp             -CCEECBTTTC-----CCCCHHHHHHHHHHHHH--CCSCTTCSSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEEE
T ss_pred             CCcEEeeCCcc-----CCCCHHHHHHHHHHHHH--hcCCCccCcHHHHHHHHHHHHHHHHHHHHc------CCCcCeEEE
Confidence            46788888873     26789999999998764  22344321         1258999999988      457789999


Q ss_pred             ecChHHHHHHHHHHhc--------CCCCeEEEeCCCCcch-----------------HHHHHhcCceeEEeecCCCCCCC
Q 019298          106 TSGCTQAIDVAMALLS--------RPGANILLPRPGFPIY-----------------ELSAAFRHIEVRHFDLLPDKGWE  160 (343)
Q Consensus       106 ~~g~~~al~~~~~~l~--------~~gd~vl~~~p~~~~~-----------------~~~~~~~g~~~~~~~~~~~~~~~  160 (343)
                      |+|+++++..+++++.        ++||+|+++.|+|..+                 ...++..|.+++.++++.+ ++.
T Consensus        84 ~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~  162 (432)
T 3a9z_A           84 TSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKV-NGQ  162 (432)
T ss_dssp             ESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTT-TSS
T ss_pred             eCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcc-cCC
Confidence            9999999999999886        5899999999999875                 3444557899999987642 457


Q ss_pred             CCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcC----------cEEEEccCCCccccCCCCCCcccc
Q 019298          161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLK----------TLVIADEVYGHLVFGDKPFVPMGV  230 (343)
Q Consensus       161 ~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~----------~~~i~D~ay~~~~~~~~~~~~~~~  230 (343)
                      +|+++|+++++++++++++++|+||||.+++.   ++|.++|++++          +++|+|++|+.+.    ....+..
T Consensus       163 ~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~---~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~----~~~~~~~  235 (432)
T 3a9z_A          163 VEVEDILAAVRPTTCLVTIMLANNETGVIMPI---SEISRRIKALNQIRAASGLPRVLVHTDAAQALGK----RRVDVED  235 (432)
T ss_dssp             CCHHHHHHTCCTTEEEEECCSBCTTTCBBCCH---HHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTT----SCCCHHH
T ss_pred             cCHHHHHHhccCCceEEEEECcccCcccccCH---HHHHHHHHhcCcccccccCCceEEEEEchhhhCC----cccChhh
Confidence            89999999998889999999999999999886   46777888988          9999999997632    1112222


Q ss_pred             cCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh--------hccccCcchHHHHHHHhccchhhH
Q 019298          231 FGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQVCIMYGCLSTIM  302 (343)
Q Consensus       231 ~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~~l~~~~  302 (343)
                      ..   ..+++.|+||.+   |.|+||+++++...       ...++..        ....+.++...+.++ .+++....
T Consensus       236 ~~---~d~~~~s~~K~~---g~~~G~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~aal~~~~  301 (432)
T 3a9z_A          236 LG---VDFLTIVGHKFY---GPRIGALYVRGVGK-------LTPLYPMLFGGGQERNFRPGTENTPMIAGL-GKAADLVS  301 (432)
T ss_dssp             HC---CSEEEEEGGGTT---CCSCEEEEETTBTT-------TBCCCCSCCSSCGGGGTSCSCCCHHHHHHH-HHHHHHHH
T ss_pred             cC---CCEEEEehhHhc---CCcceEEEEccccc-------cCCcCceeecCCccccccCCCcCHHHHHHH-HHHHHHHH
Confidence            22   226789999986   35799999965320       1111110        111345566666555 45554333


Q ss_pred             HHHH-HHHHHHHHHHHHHHhhcCCCCce
Q 019298          303 QIMI-HGNFLENFAGSCVPSYKLIPELI  329 (343)
Q Consensus       303 ~~l~-~~~~~~~~~~~~~~~L~~~~g~~  329 (343)
                      ++++ .+++++++++.+.+.|++++|+.
T Consensus       302 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~  329 (432)
T 3a9z_A          302 ENCETYEAHMRDIRDYLEERLEAEFGKR  329 (432)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhccCCc
Confidence            3444 78888999999999988755554

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3

Probab=99.94  E-value=2.1e-26  Score=215.99  Aligned_cols=272  Identities=15%  Similarity=0.105  Sum_probs=186.0

Q ss_pred             ccceeEeccC-CCCCCCCCCCcHHHHHHHHHHH---hcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298           34 EKKVISLAMG-DPTVHSCFHTTHVATEAVAEAL---LSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (343)
Q Consensus        34 ~~~~i~l~~g-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~  109 (343)
                      ...+|+|+.| +++    ++.++.+.++.....   .+.....|+ ..|.+ +++++++++.+.+|    .+++++++|+
T Consensus        88 ~~~~i~l~~g~~~~----~~~~~~i~~a~~~~~~~~~~~~~~~Y~-~~g~~-~~~~l~~~la~~~g----~~~~i~~~sG  157 (464)
T 1ibj_A           88 STLLVNLDNKFDPF----DAMSTPLYQTATFKQPSAIENGPYDYT-RSGNP-TRDALESLLAKLDK----ADRAFCFTSG  157 (464)
T ss_dssp             HHHHTCCCCSSCTT----CCSSCCCCCCSBCCCSSSSCCCSCSBT-TTCCH-HHHHHHHHHHHHHT----CSEEEEESSH
T ss_pred             CCeEEECCCCCCCC----CCCCccHHhhhhhhhhcccccCCcccc-CCCCH-HHHHHHHHHHHHhC----CCeEEEECCH
Confidence            3457889887 533    555665655544321   112234676 35666 78888888777655    3478888888


Q ss_pred             HHHHHHHHHHhcCCCCeEEEeCCCCcchHHH----HHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCC
Q 019298          110 TQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNP  185 (343)
Q Consensus       110 ~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~np  185 (343)
                      ++++..++. ++++||+|++++|+|..+...    ++..|.+++.++..       |+++++++++++++++++++|+||
T Consensus       158 t~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-------d~~~l~~~i~~~tk~v~l~~p~Np  229 (464)
T 1ibj_A          158 MAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-------KLDEVAAAIGPQTKLVWLESPTNP  229 (464)
T ss_dssp             HHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT-------SHHHHHHHCCSSEEEEEECSSCTT
T ss_pred             HHHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHHhccCceEEEEeCCCCC
Confidence            999998885 778999999999999988654    45678888888652       799999999888999999999999


Q ss_pred             cccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCC-CCcEEEEEEeCCCC
Q 019298          186 CGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP-GWRLGWFVTTDPCG  264 (343)
Q Consensus       186 tG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~-G~r~G~i~~~~~~~  264 (343)
                      ||.+++   +++|+++|++||+++|+|++|.....    ..++.    .+++++++|+||.|+.+ |+|+||+++++   
T Consensus       230 tG~v~~---l~~i~~la~~~gi~livDea~~~g~~----~~~~~----~~~div~~S~sK~~~g~~Gl~~G~l~~~~---  295 (464)
T 1ibj_A          230 RQQISD---IRKISEMAHAQGALVLVDNSIMSPVL----SRPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKG---  295 (464)
T ss_dssp             TCCCCC---HHHHHHHHHTTTCEEEEECTTTCTTT----CCGGG----TTCSEEEEETTTTTTCSSCCCCEEEEECS---
T ss_pred             CCEeec---HHHHHHHHHHcCCEEEEECCCccccc----CChhh----cCCEEEEECCcccccCCCCCcEEEEEECh---
Confidence            999985   78889999999999999999985321    11221    24679999999998764 89999999853   


Q ss_pred             CCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHH----------HHhhcCCCCceeeC
Q 019298          265 MFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSC----------VPSYKLIPELINFK  332 (343)
Q Consensus       265 ~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~----------~~~L~~~~g~~~~~  332 (343)
                          ++++++++.... ..+..+++.+.++ ...|......++ ..+...+..+.+          .+.|.++|++.+..
T Consensus       296 ----~~l~~~l~~~~~~~g~~~~~~~~~a~-~~al~~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~  370 (464)
T 1ibj_A          296 ----EKLAKEVYFLQNSEGSGLAPFDCWLC-LRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHF  370 (464)
T ss_dssp             ----HHHHHHHHHHHHHTTCBCCHHHHHHH-HHHHTTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHT
T ss_pred             ----HHHHHHHHHHHHhcCCCCCHHHHHHH-HhchhhHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHh
Confidence                357777776653 2345677777776 444443222222 111122222222          33455566777555


Q ss_pred             CC---CceEeeec
Q 019298          333 ST---GSSLKYLD  342 (343)
Q Consensus       333 ~~---~g~~~~~~  342 (343)
                      ++   .|.++|++
T Consensus       371 ~~~~g~g~~~~~~  383 (464)
T 1ibj_A          371 SQAKGAGSVFSFI  383 (464)
T ss_dssp             TTCSCCCSEEEEE
T ss_pred             ccCCCCceEEEEE
Confidence            54   24566654

>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}

Probab=99.94  E-value=5e-27  Score=213.48  Aligned_cols=242  Identities=12%  Similarity=0.019  Sum_probs=169.8

Q ss_pred             CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCC--eEEEeCCCCcchHH---HHHhcC
Q 019298           71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA--NILLPRPGFPIYEL---SAAFRH  145 (343)
Q Consensus        71 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd--~vl~~~p~~~~~~~---~~~~~g  145 (343)
                      ..|++..+..+|++.++++++        .+..++++|+++++..++++++.+||  .|+++.++|.....   .+...|
T Consensus        41 ~~y~~~~~~~~l~~~la~~~~--------~~~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~g  112 (357)
T 3lws_A           41 DQYGTGAIIEPFEQKFADVLG--------MDDAVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQDGLKELHP  112 (357)
T ss_dssp             EETTEETTHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHSS
T ss_pred             ccccCChHHHHHHHHHHHHhC--------CCcEEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccchhhhccC
Confidence            468776788999999999983        24445557788899999999988888  67776666543322   345568


Q ss_pred             ceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCc-ccccCHHHHHHHHHHHhhcCcEEEEccCCCcc--ccCC
Q 019298          146 IEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC-GNVYSYQHLQKLAETANKLKTLVIADEVYGHL--VFGD  222 (343)
Q Consensus       146 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~npt-G~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~--~~~~  222 (343)
                      .+++.++.   +++.+|+++++++.  +++++++++||||| |.+++.+++++|+++|++||+++|+|++|...  .+.+
T Consensus       113 ~~~~~v~~---~~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~  187 (357)
T 3lws_A          113 IETILVGA---ADRLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYE  187 (357)
T ss_dssp             CEEEECSC---TTSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHT
T ss_pred             cEEEEecC---CCCCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcC
Confidence            88877763   34579999999873  38899999999998 99999999999999999999999999998721  1112


Q ss_pred             CCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-c--cCcchHHHHHHHhccch
Q 019298          223 KPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-L--GDPATFIQVCIMYGCLS  299 (343)
Q Consensus       223 ~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~--~~~~~~~~~a~~~~~l~  299 (343)
                      .....+.  ... . +++.|+||+|+.++  .||++++        ++++++++..... .  .......+.++ ...|.
T Consensus       188 ~~~~~~~--~~~-d-~~~~s~sK~~~~~~--gg~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~  252 (357)
T 3lws_A          188 KTAAEIA--GLF-D-SIYISFYKGLGGIA--GAILAGP--------AAFCQTARIWKRRYGGDLISLYPYIVSA-DYYYE  252 (357)
T ss_dssp             CCHHHHH--TTS-S-EEEEESSSTTCCSS--CEEEEEC--------HHHHHHHHHHHHHTTCCCSCCHHHHHHH-HHHHH
T ss_pred             CChHHHH--hcC-C-EEEEeccccCCCCc--eEEEEcC--------HHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHH
Confidence            2111111  111 1 45889999984433  2898874        4788887755321 1  11122223333 23332


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCCCCcee-eCCCCceEeeecC
Q 019298          300 TIMQIMIHGNFLENFAGSCVPSYKLIPELIN-FKSTGSSLKYLDL  343 (343)
Q Consensus       300 ~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~-~~~~~g~~~~~~l  343 (343)
                         .+.+..+++.++++.+.+.|+++||+.+ ..|++++|+|+++
T Consensus       253 ---~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~  294 (357)
T 3lws_A          253 ---LRKDRMGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHF  294 (357)
T ss_dssp             ---HHTTCHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEE
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEe
Confidence               3444455578888899999999989987 4688899999863

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}

Probab=99.94  E-value=2.9e-26  Score=212.05  Aligned_cols=276  Identities=16%  Similarity=0.135  Sum_probs=191.9

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC---CCHH--HHH-----HHHHHHhhhCCCCCCCCcE
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTA---GLPL--TRR-----AIAEYLSRDLPYKLTPNDV  103 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~---g~~~--lr~-----~ia~~~~~~~~~~~~~~~i  103 (343)
                      +.+.++|+.|.+.    +  ++.+.+++.+++.+.....|+...   |.+.  +++     .+++++    |  .++++|
T Consensus        22 ~~~~i~~~~~~~~----~--~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~----g--~~~~~i   89 (407)
T 2dkj_A           22 QREGLELIASENF----V--SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALF----G--AAWANV   89 (407)
T ss_dssp             HHTSEECCTTCCC----C--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH----T--CSEEEC
T ss_pred             hhcceeeccCCCC----C--CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHh----C--CCcceE
Confidence            4578999999832    3  899999999887643334565432   4443  333     455555    3  345556


Q ss_pred             EEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchH---HHHHhcCceeEEeecCC-CCCCCCCHHHHHhhhcC-CceEEE
Q 019298          104 FVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE---LSAAFRHIEVRHFDLLP-DKGWEVDLDDIESLADQ-NTVALV  178 (343)
Q Consensus       104 ~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~~~~-~~~~i~  178 (343)
                      ++++| ++++..+++++.++||+|++++|+|+.+.   ..+...|..+..+++.. ++++.+|++++++.+++ ++++++
T Consensus        90 ~~~sG-t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~  168 (407)
T 2dkj_A           90 QPHSG-SQANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIV  168 (407)
T ss_dssp             CCSSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEE
T ss_pred             Eecch-HHHHHHHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhcCCeEEE
Confidence            66666 55999999999999999999999998873   44455565444444432 23578999999999874 789999


Q ss_pred             EeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCc-cccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEE
Q 019298          179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF  257 (343)
Q Consensus       179 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i  257 (343)
                      +++|+||  ...+   +++|.++|++||+++|+|++|.. +.+.+......   .  ..+++++|+||.  ++|.|+||+
T Consensus       169 ~~~p~~~--~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~---~--~~di~~~s~sK~--l~g~~~G~~  236 (407)
T 2dkj_A          169 AGASAYP--RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPL---P--YAHVVTSTTHKT--LRGPRGGLI  236 (407)
T ss_dssp             ECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCT---T--TCSEEEEESSGG--GCCCSCEEE
T ss_pred             EeccccC--CCCC---HHHHHHHHHHcCCEEEEEccccccccccCccCCcc---c--cccEEEEecccc--CCCCCceEE
Confidence            9999998  4433   78899999999999999999997 55444322111   1  245899999996  458889999


Q ss_pred             EEeCCCCCCCchHHHHHHhhhhcc--ccCcchHHHHHHHhccchhh-HHHHH-HHHHHHHHHHHHHHhhcCCCCceeeC-
Q 019298          258 VTTDPCGMFRKPKVVERMKKYFDI--LGDPATFIQVCIMYGCLSTI-MQIMI-HGNFLENFAGSCVPSYKLIPELINFK-  332 (343)
Q Consensus       258 ~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~a~~~~~l~~~-~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~-  332 (343)
                      ++++       ++++++++.....  ...++.....++ .+++... ..+++ .+++++++++.+.+.|+++ |+.+.. 
T Consensus       237 ~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~  307 (407)
T 2dkj_A          237 LSND-------PELGKRIDKLIFPGIQGGPLEHVIAGK-AVAFFEALQPEFKEYSRLVVENAKRLAEELARR-GYRIVTG  307 (407)
T ss_dssp             EESC-------HHHHHHHHHHHTTTTCSSCCHHHHHHH-HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGG
T ss_pred             EECC-------HHHHHHHHhhhcccccCCCcHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-CceeecC
Confidence            9852       4678877765432  223333333233 4444432 23333 8888999999999999988 888654 


Q ss_pred             CCCceEeeecC
Q 019298          333 STGSSLKYLDL  343 (343)
Q Consensus       333 ~~~g~~~~~~l  343 (343)
                      +.+|+|+|+++
T Consensus       308 ~~~~~~~~~~~  318 (407)
T 2dkj_A          308 GTDNHLFLVDL  318 (407)
T ss_dssp             SCSSSEEEEEC
T ss_pred             CCCceEEEEEC
Confidence            46888998864

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*

Probab=99.94  E-value=6.3e-26  Score=212.08  Aligned_cols=285  Identities=14%  Similarity=0.044  Sum_probs=187.4

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEecChH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCT  110 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~  110 (343)
                      +++.++||+.+.+..  .++ .+|.+.+++.+++...  ..|....+..++++++++++.+.++.  .. +++++++|++
T Consensus        41 ~g~~~lD~~~~~~~~--~lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~~v~~~~ggs  114 (439)
T 3dxv_A           41 NGRELIDLSGAWGAA--SLGYGHPAIVAAVSAAAANP--AGATILSASNAPAVTLAERLLASFPG--EGTHKIWFGHSGS  114 (439)
T ss_dssp             TSCEEEESSTTTTTC--TTCBSCHHHHHHHHHHHHSC--SCSCSSSSEEHHHHHHHHHHHHTTTC--TTTEEEEEESSHH
T ss_pred             CCCEEEECCCchhhc--cCCCCCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCC--CCCCEEEEeCCHH
Confidence            367889999998652  244 7899999999998754  34554556778888888888775543  34 7999999999


Q ss_pred             HHHHHHHHHh--cCCCCeEEEeCCCCcchHHHHHhcCce-e--------------EEeecCCCCCCCC-----CHHHHHh
Q 019298          111 QAIDVAMALL--SRPGANILLPRPGFPIYELSAAFRHIE-V--------------RHFDLLPDKGWEV-----DLDDIES  168 (343)
Q Consensus       111 ~al~~~~~~l--~~~gd~vl~~~p~~~~~~~~~~~~g~~-~--------------~~~~~~~~~~~~~-----d~~~l~~  168 (343)
                      +++..+++.+  ..+++.|++.+|+|+.+...+...+.. .              ..++..  +.+..     |+++|++
T Consensus       115 ea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~le~  192 (439)
T 3dxv_A          115 DANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYR--PYRNDPTGDAILTLLTE  192 (439)
T ss_dssp             HHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSS--CBTTBTTSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCC--cccccccHHHHHHHHHH
Confidence            9999999885  235678888999997665554444322 1              122211  11111     6899999


Q ss_pred             hh----cCCceEEEEeCCCCCcccccC-HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccC
Q 019298          169 LA----DQNTVALVIINPGNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSL  243 (343)
Q Consensus       169 ~~----~~~~~~i~~~~p~nptG~~~~-~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~  243 (343)
                      ++    .+++++++++.++|++|.+.+ .+.+++|.++|++||+++|+||+|.++...+.. .....++...+++   ||
T Consensus       193 ~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~-~~~~~~~~~~di~---s~  268 (439)
T 3dxv_A          193 KLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRL-HCFEHEGFVPDIL---VL  268 (439)
T ss_dssp             HHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSS-SGGGGTTCCCSEE---EE
T ss_pred             HHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchh-hHHHhcCCCCCEE---EE
Confidence            88    345566666666788888754 455999999999999999999999987554431 1222222222333   89


Q ss_pred             ccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhh
Q 019298          244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSY  322 (343)
Q Consensus       244 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L  322 (343)
                      ||+|+ +|+|+||++++        +++++.+.... ..++ .+++++.++ .++|..... -+..++++++++.+.+.|
T Consensus       269 sK~~~-~G~riG~~~~~--------~~~~~~~~~~~~~~t~-~~~~~~~aa-~aal~~~~~-~~~~~~~~~~~~~~~~~l  336 (439)
T 3dxv_A          269 GKGLG-GGLPLSAVIAP--------AEILDCASAFAMQTLH-GNPISAAAG-LAVLETIDR-DDLPAMAERKGRLLRDGL  336 (439)
T ss_dssp             CGGGG-TTSCCEEEEEE--------HHHHTSCSSSSCCTTT-TCHHHHHHH-HHHHHHHHH-TTHHHHHHHHHHHHHHHH
T ss_pred             cchhc-CCcceEEEEEC--------HHHHhhhcCCCcCCCc-ccHHHHHHH-HHHHHHHHh-cCHHHHHHHHHHHHHHHH
Confidence            99998 59999999985        36777666542 2345 788888777 455442111 114555555555555555


Q ss_pred             cC----CCCceeeCCCCceEeeec
Q 019298          323 KL----IPELINFKSTGSSLKYLD  342 (343)
Q Consensus       323 ~~----~~g~~~~~~~~g~~~~~~  342 (343)
                      .+    ++.+.... ..|.|+|++
T Consensus       337 ~~~~~~~~~~~~~~-~~g~~~~~~  359 (439)
T 3dxv_A          337 SELAKRHPLIGDIR-GRGLACGME  359 (439)
T ss_dssp             HHHHHHCTTEEEEE-EETTEEEEE
T ss_pred             HHHHHhCCCeEEEE-EEEEEEEEE
Confidence            43    45444433 345666654

>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}

Probab=99.94  E-value=1.2e-26  Score=211.01  Aligned_cols=270  Identities=12%  Similarity=-0.006  Sum_probs=185.0

Q ss_pred             ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHH
Q 019298           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV  115 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~  115 (343)
                      ..+.+..+.    +.++++|.+.+++.+...   ...|.+..+..++++.++++++        .+..++++|+++++..
T Consensus        14 ~~~~~~~~~----~~~g~~p~v~~ai~~~~~---~~~~~~~~~~~~l~~~la~~~~--------~~~~i~~~~g~~a~~~   78 (359)
T 3pj0_A           14 PYKLGGNGP----RNVGVLTEALQNIDDNLE---SDIYGNGAVIEDFETKIAKILG--------KQSAVFFPSGTMAQQI   78 (359)
T ss_dssp             SEESSSSSC----CBHHHHHHHTTTSCTTCB---CCBTTBSHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHH
T ss_pred             chhhcCCCc----cccCCCHHHHHHHHhhcc---cCcccCCHHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHH
Confidence            334455554    335678888888877433   2457666778999999999983        2334566888899999


Q ss_pred             HHHHhcCCCCe--EEEeCCCCcchH---HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCc-ccc
Q 019298          116 AMALLSRPGAN--ILLPRPGFPIYE---LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC-GNV  189 (343)
Q Consensus       116 ~~~~l~~~gd~--vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~npt-G~~  189 (343)
                      ++++++.+||.  |+++.++|....   ......|.+++.++.   +++.+|+++++++ .++++++++++|+||+ |.+
T Consensus        79 a~~~~~~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~~~~d~~~l~~~-~~~~~~v~~~~p~n~~~G~~  154 (359)
T 3pj0_A           79 ALRIWADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGT---ANQLLTIDDIKSL-REPVSSVLIELPQREIGGQL  154 (359)
T ss_dssp             HHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSC---TTSCCCHHHHHTC-SSCCSEEEEESSBGGGTSBC
T ss_pred             HHHHHHhcCCCcEEEEeccceeeehhcchHHHhcCceEEecCC---cCCCcCHHHHHhc-cCCceEEEEEecccCCCccc
Confidence            99999888876  555555543222   222456888888765   3567999999998 7789999999999998 799


Q ss_pred             cCHHHHHHHHHHHhhcCcEEEEccCCCcccc--CCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCC
Q 019298          190 YSYQHLQKLAETANKLKTLVIADEVYGHLVF--GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR  267 (343)
Q Consensus       190 ~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~--~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~  267 (343)
                      ++.+++++|+++|++||+++|+|++|..+..  .+.....+.   . ...+++.|+||+++.++ + ||++++       
T Consensus       155 ~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~-~~d~~~~s~sK~~~~~~-g-g~~~~~-------  221 (359)
T 3pj0_A          155 PAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEIC---A-LFDSVYVSFYKGIGGIA-G-AILAGN-------  221 (359)
T ss_dssp             CCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHH---T-TCSEEEEESSSTTCCSS-C-EEEEEC-------
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhh---c-cCCEEEEeccccCCCcc-e-EEEECC-------
Confidence            9999999999999999999999999875432  111111111   1 11255679999987663 2 677663       


Q ss_pred             chHHHHHHhhhhcc---ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceee-CCCCceEeeec
Q 019298          268 KPKVVERMKKYFDI---LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINF-KSTGSSLKYLD  342 (343)
Q Consensus       268 ~~~~~~~l~~~~~~---~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~-~~~~g~~~~~~  342 (343)
                       ++++++++.....   ..........+. ...+.   ...+..+++.++++.+.+.|+++||+.+. .|++++|+|++
T Consensus       222 -~~l~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~---~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~  295 (359)
T 3pj0_A          222 -DDFVQEAKIWKRRYGGDLISLYPYILSA-DYYFE---KRIGKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVY  295 (359)
T ss_dssp             -HHHHHHHHHHHHHTTCCCSCCHHHHHHH-HHHHH---HHGGGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEE
T ss_pred             -HHHHHHHHHHHHHhCCCcchhHHHHHHH-HHHHH---HHHHHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEE
Confidence             4788888764321   111122222222 22332   22345556788889999999999899874 67888888875

>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}

Probab=99.94  E-value=1.1e-25  Score=208.23  Aligned_cols=259  Identities=13%  Similarity=0.046  Sum_probs=186.6

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHHhhhCCCCCCCCc-EEEecChHHHHHHHHHHhcCCCCeE
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAPT--AGLPLTRRAIAEYLSRDLPYKLTPND-VFVTSGCTQAIDVAMALLSRPGANI  127 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~~~~~~~~~~~~~~-i~~~~g~~~al~~~~~~l~~~gd~v  127 (343)
                      .++++.+.+++.+..    ...|.+.  ....++++.+++++      +.+.++ +++++|+++++..++++++++||+|
T Consensus        22 ~~~~~~v~~a~~~~~----~~~~~~~~~~~~~~~~~~la~~~------~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~V   91 (411)
T 3nnk_A           22 INADPRVLRAMSSQL----IGQYDPAMTHYMNEVMALYRGVF------RTENRWTMLVDGTSRAGIEAILVSAIRPGDKV   91 (411)
T ss_dssp             CCCCHHHHHHHTSCC----CCTTCHHHHHHHHHHHHHHHHHH------TCCCSEEEEEESCHHHHHHHHHHHHCCTTCEE
T ss_pred             CCCCHHHHHHhhccc----cccccHHHHHHHHHHHHHHHHHh------CCCCCcEEEECCCcHHHHHHHHHHhcCCCCEE
Confidence            567888888776543    2223221  12245666666666      234454 7888899999999999999999999


Q ss_pred             EEeCCCCcc--hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298          128 LLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (343)
Q Consensus       128 l~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~  204 (343)
                      +++.|+|.+  +...++..|.+++.++++  .++.+|+++|++++++ +++++++++|+||||.+.+   +++|.++|++
T Consensus        92 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~  166 (411)
T 3nnk_A           92 LVPVFGRFGHLLCEIARRCRAEVHTIEVP--WGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQP---LAELGEICRR  166 (411)
T ss_dssp             EEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred             EEecCCchHHHHHHHHHHcCCeEEEEecC--CCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceecc---HHHHHHHHHH
Confidence            999999977  888888999999999874  4567899999999986 8999999999999999976   6788888999


Q ss_pred             cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-----
Q 019298          205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-----  279 (343)
Q Consensus       205 ~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-----  279 (343)
                      ||+++|+|++++....    ...   ....+..+++.|++|+++. +.++||++++        ++++++++...     
T Consensus       167 ~~~~li~Dea~~~~~~----~~~---~~~~~~d~~~~s~~K~l~~-~~g~g~~~~~--------~~~~~~~~~~~~~~~~  230 (411)
T 3nnk_A          167 YDALFYTDATASLGGN----PLE---TDVWGLDAVSAGMQKCLGG-PSGTSPITLS--------ARMEEAIRRRKCVEEG  230 (411)
T ss_dssp             HTCEEEEECTTTBTTB----CCC---TTTTTCSEEECCSTTTTCC-CSSEEEEEEC--------HHHHHHHHTTCCCCGG
T ss_pred             cCCEEEEECCcccCCc----ccc---hhccCCcEEEecCccccCC-CCceEEEEEC--------HHHHHHHhhccccccc
Confidence            9999999999875221    111   1222345999999998432 3358999985        36777776532     


Q ss_pred             --------------------------------ccccCcchHHHHHHHhccchhhHHH-H-HHHHHHHHHHHHHHHhhcCC
Q 019298          280 --------------------------------DILGDPATFIQVCIMYGCLSTIMQI-M-IHGNFLENFAGSCVPSYKLI  325 (343)
Q Consensus       280 --------------------------------~~~~~~~~~~~~a~~~~~l~~~~~~-l-~~~~~~~~~~~~~~~~L~~~  325 (343)
                                                      ...+..+...+.++ .+++....++ + +.+++++++++.+.+.|+++
T Consensus       231 ~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~  309 (411)
T 3nnk_A          231 IRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGA-RECARLILQEGLDYGIARHKLHGDALVKGIQAM  309 (411)
T ss_dssp             GCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHH-HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Confidence                                            01234455555555 4455433333 3 38888999999999999987


Q ss_pred             CCceeeCCCC---ceEeeec
Q 019298          326 PELINFKSTG---SSLKYLD  342 (343)
Q Consensus       326 ~g~~~~~~~~---g~~~~~~  342 (343)
                       |+.+..+.+   ++++|+.
T Consensus       310 -g~~~~~~~~~~~~~~~~~~  328 (411)
T 3nnk_A          310 -GLETFGDLKHKMNNVLGVV  328 (411)
T ss_dssp             -TCCBCSCGGGBCSSEEEEE
T ss_pred             -CCEeCCCcccccccEEEEE
Confidence             787655553   5666654

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*

Probab=99.94  E-value=6.4e-26  Score=210.87  Aligned_cols=278  Identities=15%  Similarity=0.091  Sum_probs=188.3

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++.++||+.|....  .++ .+|.+.+++.+++....  .+.. .+..++++.+++.+.+..|    .++|++++|+++
T Consensus        55 ~g~~~lD~~~~~~~~--~lG~~~p~v~~ai~~~~~~~~--~~~~-~~~~~~~~~l~~~la~~~g----~~~v~~~~ggte  125 (420)
T 2pb2_A           55 QGKEYIDFAGGIAVT--ALGHCHPALVEALKSQGETLW--HTSN-VFTNEPALRLGRKLIDATF----AERVLFMNSGTE  125 (420)
T ss_dssp             TCCEEEESSHHHHTC--TTCBTCHHHHHHHHHHHTTCC--CCCT-TSCCHHHHHHHHHHHHHSS----CSEEEEESSHHH
T ss_pred             CCCEEEEcccccccc--ccCCCCHHHHHHHHHHHHhcc--cccC-ccCCHHHHHHHHHHHhhCC----CCeEEEeCCHHH
Confidence            367788998874221  122 68999999999986532  1211 1233555666666655443    589999999999


Q ss_pred             HHHHHHHHhcC-------CC-CeEEEeCCCCcchHHH-HHhcCce------------eEEeecCCCCCCCCCHHHHHhhh
Q 019298          112 AIDVAMALLSR-------PG-ANILLPRPGFPIYELS-AAFRHIE------------VRHFDLLPDKGWEVDLDDIESLA  170 (343)
Q Consensus       112 al~~~~~~l~~-------~g-d~vl~~~p~~~~~~~~-~~~~g~~------------~~~~~~~~~~~~~~d~~~l~~~~  170 (343)
                      ++..+++.+..       +| +.|++++|+|+.+... ....|.+            +..++.       .|+++|++++
T Consensus       126 A~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~~i  198 (420)
T 2pb2_A          126 ANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-------NDLHAVKAVM  198 (420)
T ss_dssp             HHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-------TCHHHHHHHC
T ss_pred             HHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-------CCHHHHHHHh
Confidence            99999998865       67 5999999999776443 3444543            333332       2799999999


Q ss_pred             cCCceEEEEeCCCCCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCC
Q 019298          171 DQNTVALVIINPGNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV  249 (343)
Q Consensus       171 ~~~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~  249 (343)
                      ++++++++++.++|++|. +++.+++++|.++|++||+++|+||+|.++.+.+... .+..++...+++   ||||.++ 
T Consensus       199 ~~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~-~~~~~~~~~dii---t~sK~l~-  273 (420)
T 2pb2_A          199 DDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLF-AYMHYGVTPDIL---TSAKALG-  273 (420)
T ss_dssp             CTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGGGG-
T ss_pred             ccCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHH-HHHhcCCCCCeE---Eeccccc-
Confidence            888888888777888884 6899999999999999999999999998876655422 111222223333   6899998 


Q ss_pred             CCCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCC---
Q 019298          250 PGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLI---  325 (343)
Q Consensus       250 ~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~---  325 (343)
                      +|+|+||+++++        ++++.++.. ...+++.+++++.++ .++|+...+ -+..++++++++.+.+.|+++   
T Consensus       274 ~G~~iG~~~~~~--------~l~~~l~~~~~~~t~~~~~~~~aa~-~a~L~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~  343 (420)
T 2pb2_A          274 GGFPVSAMLTTQ--------EIASAFHVGSHGSTYGGNPLACAVA-GAAFDIINT-PEVLQGIHTKRQQFVQHLQAIDEQ  343 (420)
T ss_dssp             TTSCCEEEEECH--------HHHTTCC----CCEECCCHHHHHHH-HHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCceEEEEEhH--------HHHHhhcCCCcCcccCcCHHHHHHH-HHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhc
Confidence            899999999853        566555442 223456788888777 555543221 236677778888888877654   


Q ss_pred             -CCceeeCCCCceEeeec
Q 019298          326 -PELINFKSTGSSLKYLD  342 (343)
Q Consensus       326 -~g~~~~~~~~g~~~~~~  342 (343)
                       |.+....+ .|+|+|++
T Consensus       344 ~~~~~~~~~-~g~~~~v~  360 (420)
T 2pb2_A          344 FDIFSDIRG-MGLLIGAE  360 (420)
T ss_dssp             HCCEEEEEE-ETTEEEEE
T ss_pred             CCCeEEEEe-cceEEEEE
Confidence             33333233 36666664

>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*

Probab=99.94  E-value=3.5e-25  Score=205.72  Aligned_cols=253  Identities=16%  Similarity=0.132  Sum_probs=179.8

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeC
Q 019298           53 TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPR  131 (343)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~  131 (343)
                      .++.+.+++.+++.......|++..|.+++++.+.+.+.+.+|.    +++++++|+++++..+++++ +++||+|+++.
T Consensus        14 ~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~----~~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~~   89 (418)
T 2c81_A           14 HSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGV----PYCVPTTSGSTALMLALEALGIGEGDEVIVPS   89 (418)
T ss_dssp             CCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTC----SEEEEESCHHHHHHHHHHHTTCCTTCEEEEES
T ss_pred             CCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCC----CcEEEeCCHHHHHHHHHHHcCCCCcCEEEECC
Confidence            47899999999987665555887777544444444444333332    25677777899999999999 89999999999


Q ss_pred             CCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEE
Q 019298          132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA  211 (343)
Q Consensus       132 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~  211 (343)
                      |+|..+...++..|.+++.+++++ +++.+|++++++.+++++++|++   +||||..   .++++|.++|+++|+++|+
T Consensus        90 ~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~---~~~~G~~---~~~~~i~~~~~~~~~~li~  162 (418)
T 2c81_A           90 LTWIATATAVLNVNALPVFVDVEA-DTYCIDPQLIKSAITDKTKAIIP---VHLFGSM---ANMDEINEIAQEHNLFVIE  162 (418)
T ss_dssp             SSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHGGGCCTTEEEECC---BCCTTCC---CCHHHHHHHHHHTTCEEEE
T ss_pred             CccHhHHHHHHHcCCEEEEEecCC-CCCCcCHHHHHHhhCCCCeEEEE---eCCcCCc---ccHHHHHHHHHHCCCEEEE
Confidence            999999999999999999998764 35789999999999877887775   4589987   5678889999999999999


Q ss_pred             ccCCCccc-cCCCCCCcccccCCCCCEEEEccC--ccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccc------
Q 019298          212 DEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSL--SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDIL------  282 (343)
Q Consensus       212 D~ay~~~~-~~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~------  282 (343)
                      |++|..+. +++...   ..+.    .+.+.||  ||.++. | |+||+++++       ++++++++......      
T Consensus       163 D~a~~~~~~~~~~~~---~~~~----~~~~~s~s~~K~~~~-g-~~g~~~~~~-------~~l~~~~~~~~~~~~~~~~~  226 (418)
T 2c81_A          163 DCAQSHGSVWNNQRA---GTIG----DIGAFSCQQGKVLTA-G-EGGIIVTKN-------PRLFELIQQLRADSRVYCDD  226 (418)
T ss_dssp             ECTTCTTCEETTEET---TSSS----SEEEEECCTTSSSCS-S-SCEEEEESC-------HHHHHHHHHHHBTTEEECSC
T ss_pred             ECcccccCccCCEec---cccc----ceEEEeccCCcccCC-C-CeEEEEECC-------HHHHHHHHHHHHhCcccccc
Confidence            99999875 443221   1122    2777777  999988 8 999999853       45777776543210      


Q ss_pred             -------cC--c-----------chHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceee-CCCC
Q 019298          283 -------GD--P-----------ATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINF-KSTG  335 (343)
Q Consensus       283 -------~~--~-----------~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~-~~~~  335 (343)
                             ..  .           ....+.++....+   ..+-+..++.+++++.+.+.|.++||+.+. .+++
T Consensus       227 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l---~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~  297 (418)
T 2c81_A          227 SSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQL---QELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQ  297 (418)
T ss_dssp             GGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTT
T ss_pred             ccccccchhhccccccccCcCCCcCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCC
Confidence                   00  0           0111222201111   122236666777788889999988888865 4555

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2

Probab=99.94  E-value=1.2e-25  Score=211.71  Aligned_cols=265  Identities=12%  Similarity=0.079  Sum_probs=181.0

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC----CCCe---E
Q 019298           55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR----PGAN---I  127 (343)
Q Consensus        55 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~----~gd~---v  127 (343)
                      +.+.+++.+++.... ..|.+..+..+||++++++++        .+++++|+|+++++..+++++.+    +||.   |
T Consensus        55 ~~v~~a~~~~~~~~~-~~y~~~~~~~~l~~~la~~~~--------~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~v  125 (467)
T 1ax4_A           55 NAMSDHQWAAMITGD-EAYAGSRNYYDLKDKAKELFN--------YDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPV  125 (467)
T ss_dssp             CCEEHHHHHHHHTCC-CCSSSCHHHHHHHHHHHHHHC--------CCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCE
T ss_pred             HHHHHHHHHHHhhcc-cccccCccHHHHHHHHHHHcC--------CCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceE
Confidence            566676666665433 368777788999999999993        37999999999999999999988    9998   9


Q ss_pred             EEeCCCCcchHHHHHhcCceeEEeecCC---C-----CCCCCCHHHHHhhhcC----CceEEEEeCCCCCc-ccccCHHH
Q 019298          128 LLPRPGFPIYELSAAFRHIEVRHFDLLP---D-----KGWEVDLDDIESLADQ----NTVALVIINPGNPC-GNVYSYQH  194 (343)
Q Consensus       128 l~~~p~~~~~~~~~~~~g~~~~~~~~~~---~-----~~~~~d~~~l~~~~~~----~~~~i~~~~p~npt-G~~~~~~~  194 (343)
                      +++.+.|..+...+...|..++.++...   .     .++.+|+++|++++++    ++++|++++|+||| |.+++.++
T Consensus       126 iv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~  205 (467)
T 1ax4_A          126 FISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSN  205 (467)
T ss_dssp             EEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHH
T ss_pred             EEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhH
Confidence            8887777777777888888887665421   1     1346899999999874    57899999999999 89999999


Q ss_pred             HHHHHHHHhhcCcEEEEccCCCc--c--------ccCCCCCCccc-ccCCCCCEEEEccCccccCCC-CCcEEEEEEeCC
Q 019298          195 LQKLAETANKLKTLVIADEVYGH--L--------VFGDKPFVPMG-VFGSTVPILTLGSLSKRWIVP-GWRLGWFVTTDP  262 (343)
Q Consensus       195 l~~l~~~~~~~~~~~i~D~ay~~--~--------~~~~~~~~~~~-~~~~~~~~i~~~S~sK~~~~~-G~r~G~i~~~~~  262 (343)
                      +++|+++|++||+++|+|+++..  .        .+.+.....+. ....... +++.|+||.++++ |   ||+++++ 
T Consensus       206 l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~s~sK~~g~~~G---g~~~~~d-  280 (467)
T 1ax4_A          206 LKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYAD-ALTMSAKKDPLLNIG---GLVAIRD-  280 (467)
T ss_dssp             HHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCS-EEEEETTSTTCCSSC---EEEEESS-
T ss_pred             HHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccc-eEEEeccccCCCCcc---eEEEeCC-
Confidence            99999999999999999998653  1        12222111110 0001111 5678999998765 4   6676643 


Q ss_pred             CCCCCch-HHHHHHhhhhc------cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCC
Q 019298          263 CGMFRKP-KVVERMKKYFD------ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTG  335 (343)
Q Consensus       263 ~~~~~~~-~~~~~l~~~~~------~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~  335 (343)
                            + ++++++.....      .....+.....++ ...+....+ .+..+...++++.+.+.|++ +|+.+..|++
T Consensus       281 ------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~l~~~~~-~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~  351 (467)
T 1ax4_A          281 ------NEEIFTLARQRCVPMEGFVTYGGLAGRDMAAM-VQGLEEGTE-EEYLHYRIGQVKYLGDRLRE-AGIPIQYPTG  351 (467)
T ss_dssp             ------CHHHHHHHHHHHHHHTCSTTTTTCCHHHHHHH-HHHHHHTTC-HHHHHHHHHHHHHHHHHHHH-TTCCBCSSCC
T ss_pred             ------HHHHHHHHHhhccccccccccCCccchHHHHH-HHHHHHhhh-hhHHHHHHHHHHHHHHHHHh-CCCCcccCCC
Confidence                  3 46666654321      1112232222222 112221111 01233334667778888877 4788768899


Q ss_pred             ceEeeec
Q 019298          336 SSLKYLD  342 (343)
Q Consensus       336 g~~~~~~  342 (343)
                      |+++|++
T Consensus       352 ~~~~~~~  358 (467)
T 1ax4_A          352 GHAVFVD  358 (467)
T ss_dssp             SSEEEEE
T ss_pred             ceEEEEe
Confidence            9999986

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}

Probab=99.94  E-value=1.3e-25  Score=207.98  Aligned_cols=217  Identities=14%  Similarity=0.091  Sum_probs=162.8

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh----cCceeEEeecC
Q 019298           79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----RHIEVRHFDLL  154 (343)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~----~g~~~~~~~~~  154 (343)
                      ..+|++.+++++        ..+++++++|+++++..++++++++||+|+++.|+|..+...+..    .|.+++.++.+
T Consensus        83 ~~~l~~~la~~~--------g~~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~  154 (414)
T 3ndn_A           83 VSVFEERLRLIE--------GAPAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD  154 (414)
T ss_dssp             HHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT
T ss_pred             HHHHHHHHHHHH--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC
Confidence            355666666666        246889999999999999999999999999999999988776644    89999888753


Q ss_pred             CCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC
Q 019298          155 PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST  234 (343)
Q Consensus       155 ~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~  234 (343)
                             |++++++++++++++|++++|+||||.+.+   +++|+++|+++|+++|+|++|.......    +.    ..
T Consensus       155 -------d~~~l~~ai~~~t~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~----~~----~~  216 (414)
T 3ndn_A          155 -------DLSQWERALSVPTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQQ----GF----PL  216 (414)
T ss_dssp             -------CHHHHHHHTSSCCSEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCC----CG----GG
T ss_pred             -------CHHHHHHhcCCCCeEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccCC----ch----hc
Confidence                   799999999989999999999999999955   7788999999999999999998533211    11    11


Q ss_pred             CCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHH-HHhhhhc-cccCcchHHHHHHHhccchhhHHHHHHHHHH
Q 019298          235 VPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVE-RMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMIHGNFL  311 (343)
Q Consensus       235 ~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~-~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~  311 (343)
                      +..+++.|+||.++.+| +++|++++++        +.+. .++.... .....++....++ ...+   ..+..+.++.
T Consensus       217 g~div~~S~sK~l~~~G~~~~G~vv~~~--------~~~~~~l~~~~~~~g~~~~~~~a~~~-~~~l---~~l~~r~~~~  284 (414)
T 3ndn_A          217 GVDVVVYSGTKHIDGQGRVLGGAILGDR--------EYIDGPVQKLMRHTGPAMSAFNAWVL-LKGL---ETLAIRVQHS  284 (414)
T ss_dssp             TCSEEEEETTTTTTCSSCCCCEEEEECH--------HHHTTHHHHHHHHHCCCCCHHHHHHH-HHHG---GGHHHHHHHH
T ss_pred             CCCeEeccCCccccCCCCceEEEEEECH--------HHHHHHHHHHHHHcCCCCCHHHHHHH-HHHH---HHHHHHHHHH
Confidence            23489999999999988 8999999853        3443 5554322 2334455544443 2221   2233366777


Q ss_pred             HHHHHHHHHhhcCCCCce-eeCC
Q 019298          312 ENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       312 ~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      .++++.+.+.|+++|++. +..|
T Consensus       285 ~~~a~~l~~~L~~~p~v~~v~~p  307 (414)
T 3ndn_A          285 NASAQRIAEFLNGHPSVRWVRYP  307 (414)
T ss_dssp             HHHHHHHHHHHHTCTTEEEEECT
T ss_pred             HHHHHHHHHHHhcCCCEeEEECC
Confidence            888899999999888776 4444

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*

Probab=99.94  E-value=4.7e-26  Score=212.58  Aligned_cols=286  Identities=13%  Similarity=0.021  Sum_probs=183.7

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      +..++||+.+.+..  .++ .+|.+.+++.+++.....  +. ..+..+++..+++.+.+.++  .++++|++++|++++
T Consensus        42 g~~~lD~~~~~~~~--~lG~~~p~v~~a~~~~~~~~~~--~~-~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ea  114 (433)
T 1zod_A           42 GRAILDFTSGQMSA--VLGHCHPEIVSVIGEYAGKLDH--LF-SEMLSRPVVDLATRLANITP--PGLDRALLLSTGAES  114 (433)
T ss_dssp             CCEEEETTHHHHTC--TTCBTCHHHHHHHHHHHHHCCC--CC-TTCCCHHHHHHHHHHHHHSC--TTCCEEEEESCHHHH
T ss_pred             CCEEEEcccchhcc--ccCCCCHHHHHHHHHHHHhCcc--cc-cccCCHHHHHHHHHHHHhCC--CCcCEEEEeCchHHH
Confidence            56788998776431  133 589999999998865321  11 12223445555555554443  457899999999999


Q ss_pred             HHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcC------------ceeEEeecCC--CCCC--------CCCHHHHHh
Q 019298          113 IDVAMALLS--RPGANILLPRPGFPIYELSAAFRH------------IEVRHFDLLP--DKGW--------EVDLDDIES  168 (343)
Q Consensus       113 l~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g------------~~~~~~~~~~--~~~~--------~~d~~~l~~  168 (343)
                      +..+++.+.  ..+++|++.+|+|+++...+....            ..+..++...  ...+        .+|+++|++
T Consensus       115 ~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~  194 (433)
T 1zod_A          115 NEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFD  194 (433)
T ss_dssp             HHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHH
Confidence            999998653  235799999999987655433221            1233333211  1111        246899998


Q ss_pred             hhcC---CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccC
Q 019298          169 LADQ---NTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSL  243 (343)
Q Consensus       169 ~~~~---~~~~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~  243 (343)
                      .+++   +...+++++| +||||. ..+.+++++|.++|++||+++|+||+|.++.+.+.. ..+...+...+   +.|+
T Consensus       195 ~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~-~~~~~~~~~~d---i~s~  270 (433)
T 1zod_A          195 LIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTM-FACQRDGVTPD---ILTL  270 (433)
T ss_dssp             HHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-STHHHHTCCCS---EEEE
T ss_pred             HHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchH-hHHhhcCCCCC---EEEe
Confidence            8863   3345566778 588996 578899999999999999999999999987654431 11121222222   3489


Q ss_pred             ccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh---ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHH
Q 019298          244 SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF---DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVP  320 (343)
Q Consensus       244 sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~  320 (343)
                      ||+|+. |+|+||++++        +++++.+....   ..+.+.+++++.++ .++|+...+ .+..++++++++.+.+
T Consensus       271 sK~~~~-G~~ig~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~~a~-~aal~~~~~-~~~~~~~~~~~~~l~~  339 (433)
T 1zod_A          271 SKTLGA-GLPLAAIVTS--------AAIEERAHELGYLFYTTHVSDPLPAAVG-LRVLDVVQR-DGLVARANVMGDRLRR  339 (433)
T ss_dssp             CHHHHT-TSSCEEEEEC--------HHHHHHHHHTTCCCCCTTTTCHHHHHHH-HHHHHHHHH-TTHHHHHHHHHHHHHH
T ss_pred             cccccC-CCCeeEEEEh--------HHHHHhhccCCCCCCCCCCcCHHHHHHH-HHHHHHHHh-CCHHHHHHHHHHHHHH
Confidence            999986 9999999985        36777776532   13456788888877 455432111 1156667777777777


Q ss_pred             hhcC----CCCceeeCCCCceEeeec
Q 019298          321 SYKL----IPELINFKSTGSSLKYLD  342 (343)
Q Consensus       321 ~L~~----~~g~~~~~~~~g~~~~~~  342 (343)
                      .|++    +|.+....+ .|+|+|++
T Consensus       340 ~l~~l~~~~~~~~~~~~-~g~~~~i~  364 (433)
T 1zod_A          340 GLLDLMERFDCIGDVRG-RGLLLGVE  364 (433)
T ss_dssp             HHHHHHHHCTTEEEEEE-ETTEEEEE
T ss_pred             HHHHHHHhCCCeEEEEE-EEEEEEEE
Confidence            6654    344433333 46677765

>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}

Probab=99.94  E-value=2.3e-25  Score=206.50  Aligned_cols=258  Identities=12%  Similarity=0.093  Sum_probs=184.2

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHHhhhCCCCCCCCcEE-EecChHHHHHHHHHHhcCCCCeE
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAPT--AGLPLTRRAIAEYLSRDLPYKLTPNDVF-VTSGCTQAIDVAMALLSRPGANI  127 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~~~~~~~~~~~~~~i~-~~~g~~~al~~~~~~l~~~gd~v  127 (343)
                      .+.++.+.+++.+    .....|.+.  ....++++.+++++      +.++++++ +++|+++++..+++++.++||+|
T Consensus        20 ~~~~~~v~~a~~~----~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~V   89 (416)
T 3isl_A           20 VEVDPRVLRVMST----PVVGQFDPAFTGIMNETMEMLRELF------QTKNRWAYPIDGTSRAGIEAVLASVIEPEDDV   89 (416)
T ss_dssp             CCCCHHHHHHTTS----CCCCTTSHHHHHHHHHHHHHHHHHT------TCCCSEEEEEESCHHHHHHHHHHHHCCTTCEE
T ss_pred             cCcCHHHHHHhcc----cCCCCccHHHHHHHHHHHHHHHHHh------CCCCCcEEEecCcHHHHHHHHHHHhcCCCCEE
Confidence            4456777665544    223334321  12345566666665      34566665 88899999999999999999999


Q ss_pred             EEeCCCCcc--hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc-CCceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298          128 LLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (343)
Q Consensus       128 l~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~  204 (343)
                      ++++|+|.+  +...++..|.+++.++++.  ++.+|+++++++++ ++++++++++|+||||.+++   +++|.++|++
T Consensus        90 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~  164 (416)
T 3isl_A           90 LIPIYGRFGYLLTEIAERYGANVHMLECEW--GTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHP---LKAIGEACRT  164 (416)
T ss_dssp             EEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CHHHHHHHHH
T ss_pred             EEecCCcccHHHHHHHHhcCCeeEEEecCC--CCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecC---HHHHHHHHHH
Confidence            999999987  6677888999999998764  34689999999998 58899999999999999987   7788899999


Q ss_pred             cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccc-cCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh----
Q 019298          205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKR-WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF----  279 (343)
Q Consensus       205 ~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~----  279 (343)
                      ||+++|+|++|+....    ...   ....+..+++.|++|. ++..  ++|+++++        +++++++....    
T Consensus       165 ~~~~li~D~a~~~~~~----~~~---~~~~~~d~~~~s~~K~l~g~~--g~g~~~~~--------~~~~~~~~~~~~~~~  227 (416)
T 3isl_A          165 EDALFIVDAVATIGGC----EVK---VDEWKIDAAIGGTQKCLSVPS--GMAPITYN--------ERVADVIAARKKVER  227 (416)
T ss_dssp             TTCEEEEECTTTTTTS----CCC---TTTTTCSEEECCSSSTTCCCS--SEEEEEEC--------HHHHHHHHTC-----
T ss_pred             cCCEEEEECCccccCC----Ccc---hhhcCCCEEEecCccccCCCC--CeEEEEEC--------HHHHHHhhccccccc
Confidence            9999999999875321    111   1222345999999997 4444  58999885        36777665321    


Q ss_pred             ----------------------------------c-cccCcchHHHHHHHhccchhhHHH-H-HHHHHHHHHHHHHHHhh
Q 019298          280 ----------------------------------D-ILGDPATFIQVCIMYGCLSTIMQI-M-IHGNFLENFAGSCVPSY  322 (343)
Q Consensus       280 ----------------------------------~-~~~~~~~~~~~a~~~~~l~~~~~~-l-~~~~~~~~~~~~~~~~L  322 (343)
                                                        . ..+.++...+.++ .+++....++ + +.+++++++++.+.+.|
T Consensus       228 Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~g~~~~~~~~~~~~~~l~~~L  306 (416)
T 3isl_A          228 GIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYAL-REGVRLVLEEGLETRFERHRHHEAALAAGI  306 (416)
T ss_dssp             -------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHH-HHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence                                              1 1234455555555 5555543343 3 38888999999999999


Q ss_pred             cCCCCceeeCCCC---ceEeeec
Q 019298          323 KLIPELINFKSTG---SSLKYLD  342 (343)
Q Consensus       323 ~~~~g~~~~~~~~---g~~~~~~  342 (343)
                      +++ |+.+..+.+   +.++|+.
T Consensus       307 ~~~-g~~~~~~~~~~~~~~~~~~  328 (416)
T 3isl_A          307 KAM-GLRLFGDDSCKMPVVTCVE  328 (416)
T ss_dssp             HHT-TCCBCSCGGGBCTTEEEEE
T ss_pred             HHc-CCEeccCccccCCcEEEEe
Confidence            986 888766654   5566654

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*

Probab=99.94  E-value=5.8e-25  Score=209.62  Aligned_cols=253  Identities=14%  Similarity=0.102  Sum_probs=184.3

Q ss_pred             CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcE--EEecChHHHHHHHHHHhcCCC--------CeEEEeCCCCcchHHHH
Q 019298           72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDV--FVTSGCTQAIDVAMALLSRPG--------ANILLPRPGFPIYELSA  141 (343)
Q Consensus        72 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i--~~~~g~~~al~~~~~~l~~~g--------d~vl~~~p~~~~~~~~~  141 (343)
                      .|....+..++++.+++++.+.+|...+++++  ++|+|+++++..+++++.++|        |+|+++.|+|..+...+
T Consensus       130 ~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~  209 (514)
T 3mad_A          130 HPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAA  209 (514)
T ss_dssp             CTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHH
T ss_pred             ccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHH
Confidence            44444566788889988888888766656788  999999999999999998766        89999999999999999


Q ss_pred             HhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccC
Q 019298          142 AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG  221 (343)
Q Consensus       142 ~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~  221 (343)
                      +..|.+++.++++.  ++.+|+++|++++++++++|++++|+||||.+.+   +++|.++|++||+++|+|++|+++.+.
T Consensus       210 ~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~i~livDea~~~~~~~  284 (514)
T 3mad_A          210 QYFGIKLVRTPLDA--DYRADVAAMREAITPNTVVVAGSAPGYPHGVVDP---IPEIAALAAEHGIGCHVDACLGGFILP  284 (514)
T ss_dssp             HHHTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTTTTHH
T ss_pred             HHcCCeeEEeeeCC--CCCCCHHHHHHHhccCCEEEEEeCCCCCCccccC---HHHHHHHHHHhCCeEEEecccccccch
Confidence            99999999998864  5779999999999989999999999999999965   688888999999999999999987541


Q ss_pred             -----CCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc------------cccC
Q 019298          222 -----DKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD------------ILGD  284 (343)
Q Consensus       222 -----~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~------------~~~~  284 (343)
                           +.....+. ....+..+++.|++|. +..|.++|++++++        +..........            ..++
T Consensus       285 ~~~~~g~~~~~~~-~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~gs  354 (514)
T 3mad_A          285 WAERLGYPVPPFD-FRLEGVTSVSADTHKY-GYGAKGTSVILYRR--------PDLLHYQYFIAADWPGGLYFSPTFAGS  354 (514)
T ss_dssp             HHHHTTCCCCCCS-TTSTTCCEEEECTTTT-TCCCSSCEEEEESS--------HHHHTTTCEEESSCTTCSEEESSSCSS
T ss_pred             hHHhcCCCCCccc-ccCCCCcEEEECchhc-cCCCCCeEEEEEeC--------HHHhccccccccccCCCcccCCccCCC
Confidence                 11111111 1222345889999999 46678899999864        22222111100            0112


Q ss_pred             cchHHHHHHHhccchh-hHHH-HHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeee
Q 019298          285 PATFIQVCIMYGCLST-IMQI-MIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYL  341 (343)
Q Consensus       285 ~~~~~~~a~~~~~l~~-~~~~-l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~  341 (343)
                      .+.....+. .+++.. .... .+..+++.++++++.+.|++++|+.+..+..+ ++|+
T Consensus       355 ~~~~~~~a~-~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~-~~~~  411 (514)
T 3mad_A          355 RPGALSATA-WAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGDPLW-VIAV  411 (514)
T ss_dssp             CCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCCSS-EEEE
T ss_pred             CchHHHHHH-HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCCeE-EEEE
Confidence            222222222 222221 1222 33888889999999999999889987666555 5554

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}

Probab=99.94  E-value=3.5e-25  Score=204.16  Aligned_cols=278  Identities=15%  Similarity=0.087  Sum_probs=183.6

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      ++.++||+.+.+.  +.++ .+|.+.+++.+++.... +.|  ..+..++++++++++.+..+    ++++++++|++++
T Consensus        35 g~~~lD~~~~~~~--~~lG~~~p~v~~a~~~~~~~~~-~~~--~~~~~~~~~~l~~~la~~~~----~~~v~~~~gg~ea  105 (395)
T 3nx3_A           35 AKKYLDFSSGIGV--CALGYNHAKFNAKIKAQVDKLL-HTS--NLYYNENIAAAAKNLAKASA----LERVFFTNSGTES  105 (395)
T ss_dssp             CCEEEESSHHHHT--CTTCBSCHHHHHHHHHHHTTCS-CCC--TTSBCHHHHHHHHHHHHHHT----CSEEEEESSHHHH
T ss_pred             CCEEEECCCcHHh--ccCCCCCHHHHHHHHHHHHhcc-ccc--cccCCHHHHHHHHHHHHhcC----CCeEEEeCCHHHH
Confidence            6789999988643  2244 68999999999887532 122  12334555555555555433    6899999999999


Q ss_pred             HHHHHHHhc-------CCCCeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCCCCCCCCCHHHHHhhhcC
Q 019298          113 IDVAMALLS-------RPGANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGWEVDLDDIESLADQ  172 (343)
Q Consensus       113 l~~~~~~l~-------~~gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~~~l~~~~~~  172 (343)
                      +..+++.+.       .++++|++.+|+|+++...+...+.             ++..++.       .|+++|++++++
T Consensus       106 ~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~  178 (395)
T 3nx3_A          106 IEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-------NDISSVEKLVNE  178 (395)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-------TCHHHHHTTCCT
T ss_pred             HHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-------CCHHHHHHhccC
Confidence            999998875       3579999999999877654444332             2333322       279999999987


Q ss_pred             CceEEEEeCCCCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCC
Q 019298          173 NTVALVIINPGNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG  251 (343)
Q Consensus       173 ~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G  251 (343)
                      ++++++++.++|++|.. ++.+++++|.++|++||+++|+||+|.++...+.. .....++..   ..+.|+||.++. |
T Consensus       179 ~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~-~~~~~~~~~---~d~~t~sK~~~~-G  253 (395)
T 3nx3_A          179 KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKF-FAYEHAQIL---PDIMTSAKALGC-G  253 (395)
T ss_dssp             TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGGTCC---CSEEEECGGGTT-T
T ss_pred             CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcc-hhHHhcCCC---CCEEEecccccC-C
Confidence            78888877777777776 78889999999999999999999999987654432 111222221   223478999975 9


Q ss_pred             CcEEEEEEeCCCCCCCchHH-HHHHhhhh-ccccCcchHHHHHHHhccchhh--HHHHH-HHHHHHHHHHHHHHhhcCCC
Q 019298          252 WRLGWFVTTDPCGMFRKPKV-VERMKKYF-DILGDPATFIQVCIMYGCLSTI--MQIMI-HGNFLENFAGSCVPSYKLIP  326 (343)
Q Consensus       252 ~r~G~i~~~~~~~~~~~~~~-~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~--~~~l~-~~~~~~~~~~~~~~~L~~~~  326 (343)
                      +|+||++++        +++ ++.++... ...++.++++++++ .++|+..  .++.+ .++..+..++.+.+.+..+|
T Consensus       254 ~~~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~aa-~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  324 (395)
T 3nx3_A          254 LSVGAFVIN--------QKVASNSLEAGDHGSTYGGNPLVCAGV-NAVFEIFKEEKILENVNKLTPYLEQSLDELINEFD  324 (395)
T ss_dssp             SCCEEEEEC--------HHHHHHHSCTTCCSSCBSCCHHHHHHH-HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             CceEEEEEc--------hhhhhhhcCCcccCCCCCCCHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            999999985        356 77776553 23567788888887 5555421  22222 22233333444444444455


Q ss_pred             CceeeCCCCceEeeec
Q 019298          327 ELINFKSTGSSLKYLD  342 (343)
Q Consensus       327 g~~~~~~~~g~~~~~~  342 (343)
                      .+.... ..|+|+|++
T Consensus       325 ~~~~~~-~~g~~~~~~  339 (395)
T 3nx3_A          325 FCKKRK-GLGFMQGLS  339 (395)
T ss_dssp             TEEEEE-EETTEEEEE
T ss_pred             CeEEEE-eEEEEEEEE
Confidence            444323 346666664

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=99.94  E-value=7.3e-25  Score=208.08  Aligned_cols=273  Identities=15%  Similarity=0.102  Sum_probs=196.4

Q ss_pred             CCcHHHHHHHHHHHhcC---CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC-----C
Q 019298           52 HTTHVATEAVAEALLSE---KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR-----P  123 (343)
Q Consensus        52 ~~~~~~~~~~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~-----~  123 (343)
                      ..++.+.+++.+++...   ....|....+..++++.+++++.+.+|...+++++++++|+++++..+++++.+     +
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~  154 (497)
T 3mc6_A           75 HGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHR  154 (497)
T ss_dssp             CCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHS
T ss_pred             CCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcC
Confidence            44577888888777642   223455555677899999999988888766688999999999999999998864     4


Q ss_pred             C---CeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHH
Q 019298          124 G---ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAE  200 (343)
Q Consensus       124 g---d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~  200 (343)
                      |   |+|+++.|+|..+...+...|.+++.+++++ +++.+|+++|++++++++++|++++|+||||.+.+   +++|.+
T Consensus       155 g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---l~~i~~  230 (497)
T 3mc6_A          155 GITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDP-TTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADD---IEGLGK  230 (497)
T ss_dssp             CCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCT-TTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCS---CTTTTT
T ss_pred             CCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCc-ccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCC---HHHHHH
Confidence            5   8999999999999999999999999998864 36789999999999988999999999999999954   778888


Q ss_pred             HHhhcCcEEEEccCCCccccC-----CCCCC-cccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298          201 TANKLKTLVIADEVYGHLVFG-----DKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (343)
Q Consensus       201 ~~~~~~~~~i~D~ay~~~~~~-----~~~~~-~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~  274 (343)
                      +|+++|+++|+|++|+.+...     +.... ++ .....+..+++.|++|. +..+.++||+++++        +....
T Consensus       231 la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~-~~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~--------~~~~~  300 (497)
T 3mc6_A          231 IAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLL-DFRVPGVTSISCDTHKY-GFAPKGSSVIMYRN--------SDLRM  300 (497)
T ss_dssp             HHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCC-STTSTTCCEEEEETTTT-TCCCSSCEEEECSS--------HHHHT
T ss_pred             HHHHhCCEEEEECcchhhhhhhhhhhcccCCccc-cccCCCCcEEEECchhh-cCCCCCceeEEecC--------HHHHh
Confidence            999999999999999965321     11101 11 11122335888999998 56778899999864        22222


Q ss_pred             Hhhhhccc------------cCcc---hHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC-CCCceee-CCCCce
Q 019298          275 MKKYFDIL------------GDPA---TFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL-IPELINF-KSTGSS  337 (343)
Q Consensus       275 l~~~~~~~------------~~~~---~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~-~~g~~~~-~~~~g~  337 (343)
                      ........            ++.+   ..++.++ ...+.. ..+.+..++..++++.+.+.|++ +||+.+. .+.+++
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aa-l~~l~~-~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~  378 (497)
T 3mc6_A          301 HQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWAT-MVNMGE-NGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSV  378 (497)
T ss_dssp             TTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSE
T ss_pred             hhhcccccccCCCcCCcCcccCCcchhHHHHHHH-HHHHhH-HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeE
Confidence            21111000            0111   2223333 222221 22334788888899999999998 7999865 455555


Q ss_pred             Eee
Q 019298          338 LKY  340 (343)
Q Consensus       338 ~~~  340 (343)
                      +.|
T Consensus       379 v~~  381 (497)
T 3mc6_A          379 ISF  381 (497)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            554

>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.93  E-value=4.3e-25  Score=202.45  Aligned_cols=273  Identities=12%  Similarity=0.091  Sum_probs=189.1

Q ss_pred             ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT--AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      +.+.|+-|-      .++++++.+++.+....    .|.+.  ....++++.+++++...  .++++++|++|+|+++++
T Consensus         5 ~~~~~~p~p------~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~v~~~~g~t~al   72 (385)
T 2bkw_A            5 VDTLLIPGP------IILSGAVQKALDVPSLG----HTSPEFVSIFQRVLKNTRAVFKSA--AASKSQPFVLAGSGTLGW   72 (385)
T ss_dssp             CCEECSSSS------CCCCHHHHHTTSCCCCC----TTSHHHHHHHHHHHHHHHHHTTCC--GGGTCEEEEEESCTTHHH
T ss_pred             cceeecCCC------cCchHHHHHHHhccccc----cCCHHHHHHHHHHHHHHHHHhCCC--CCCCCceEEEcCchHHHH
Confidence            345555553      45678888777654321    23221  13456778888888542  234678999999999999


Q ss_pred             HHHHHHhc---CCCCeEEEe-CCCCcch-HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcc
Q 019298          114 DVAMALLS---RPGANILLP-RPGFPIY-ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCG  187 (343)
Q Consensus       114 ~~~~~~l~---~~gd~vl~~-~p~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG  187 (343)
                      ..+++++.   ++||+|+++ .|+|..+ ...++..|.+++.+++. +.++.+|+++|++++++ +++++++++|+||||
T Consensus        73 ~~~~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG  151 (385)
T 2bkw_A           73 DIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPL-KIGESVPLELITEKLSQNSYGAVTVTHVDTSTA  151 (385)
T ss_dssp             HHHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCS-STTSCCCHHHHHHHHHHSCCSEEEEESEETTTT
T ss_pred             HHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecC-CCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcC
Confidence            99999997   899999888 5566555 35677789999998872 24567999999999876 789999999999999


Q ss_pred             cccCHHHHHHHHHHHhhc--CcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccC-CCCCcEEEEEEeCCCC
Q 019298          188 NVYSYQHLQKLAETANKL--KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI-VPGWRLGWFVTTDPCG  264 (343)
Q Consensus       188 ~~~~~~~l~~l~~~~~~~--~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G~i~~~~~~~  264 (343)
                      .+++   +++|+++|+++  |+++|+|++|+...    ....+   ...+..+++.|+||.++ .+|  +||+++++   
T Consensus       152 ~~~~---l~~i~~~~~~~~~~~~li~D~a~~~~~----~~~~~---~~~~~d~~~~s~~K~~~~~~G--~G~~~~~~---  216 (385)
T 2bkw_A          152 VLSD---LKAISQAIKQTSPETFFVVDAVCSIGC----EEFEF---DEWGVDFALTASQKAIGAPAG--LSISLCSS---  216 (385)
T ss_dssp             EECC---HHHHHHHHHHHCTTSEEEEECTTTTTT----SCCCT---TTTTCSEEEEESSSTTCCCSC--EEEEEECH---
T ss_pred             eEcC---HHHHHHHHHhhCCCCEEEEECccccCC----ccccc---cccCceEEEecCccccccCCc--ceEEEEcH---
Confidence            9987   56888899999  99999999997522    11112   22234589999999754 466  59999853   


Q ss_pred             CCCchHHHH-HHh----------------------hhhc---c-ccCcchHHHHHHHhccchhhHHH-H-HHHHHHHHHH
Q 019298          265 MFRKPKVVE-RMK----------------------KYFD---I-LGDPATFIQVCIMYGCLSTIMQI-M-IHGNFLENFA  315 (343)
Q Consensus       265 ~~~~~~~~~-~l~----------------------~~~~---~-~~~~~~~~~~a~~~~~l~~~~~~-l-~~~~~~~~~~  315 (343)
                           ++++ +++                      ....   . .+.++...+.++ .+++....+. + +.++++++++
T Consensus       217 -----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~  290 (385)
T 2bkw_A          217 -----RFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSL-DVALKEILEEGLHKRWDLHREMS  290 (385)
T ss_dssp             -----HHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHH-HHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             -----HHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHH-HHHHHHHHHccHHHHHHHHHHHH
Confidence                 4444 331                      1111   0 134556655555 4444432222 3 3788889999


Q ss_pred             HHHHHhh-cCCCCceeeCCC-----CceEeeecC
Q 019298          316 GSCVPSY-KLIPELINFKST-----GSSLKYLDL  343 (343)
Q Consensus       316 ~~~~~~L-~~~~g~~~~~~~-----~g~~~~~~l  343 (343)
                      +.+.+.| +++ |+.+..++     .++++|+++
T Consensus       291 ~~l~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~  323 (385)
T 2bkw_A          291 DWFKDSLVNGL-QLTSVSRYPSNMSAHGLTAVYV  323 (385)
T ss_dssp             HHHHHHHHTTT-CCEESSCSSSTTBCSSCEEEEC
T ss_pred             HHHHHHHHHhc-CceecccCcccccCCceEEEec
Confidence            9999999 888 88865432     577777753

>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*

Probab=99.93  E-value=1.2e-24  Score=200.26  Aligned_cols=262  Identities=13%  Similarity=0.078  Sum_probs=188.5

Q ss_pred             ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHH
Q 019298           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDV  115 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~  115 (343)
                      +.|+|+.  |.    +  ++.+.+++.+++...   .|.+..+..++|++++++++        .+++++++|+++++..
T Consensus         9 ~~i~~~~--p~----~--~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~al~~   69 (393)
T 1mdo_A            9 DFLPFSR--PA----M--GAEELAAVKTVLDSG---WITTGPKNQELEAAFCRLTG--------NQYAVAVSSATAGMHI   69 (393)
T ss_dssp             CCBCSCC--CC----C--CHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHH
T ss_pred             cccccCC--CC----C--CHHHHHHHHHHHhcC---CcCCChHHHHHHHHHHHHhC--------CCcEEEecChHHHHHH
Confidence            3567765  32    2  367788888888653   24445678999999999993        3589999999999999


Q ss_pred             HHHHh-cCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298          116 AMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (343)
Q Consensus       116 ~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~  194 (343)
                      +++++ +++||+|+++.|+|..+...++..|.+++.+++++ +++.+|++++++.+++++++++++   ||||...   +
T Consensus        70 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~---~~~G~~~---~  142 (393)
T 1mdo_A           70 ALMALGIGEGDEVITPSMTWVSTLNMIVLLGANPVMVDVDR-DTLMVTPEHIEAAITPQTKAIIPV---HYAGAPA---D  142 (393)
T ss_dssp             HHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEECCB---CGGGCCC---C
T ss_pred             HHHHcCCCCCCEEEeCCCccHhHHHHHHHCCCEEEEEeccC-CcCCCCHHHHHHhcCCCceEEEEe---CCCCCcC---C
Confidence            99999 89999999999999999999999999999998864 356799999999998778877765   4899985   4


Q ss_pred             HHHHHHHHhhcCcEEEEccCCCcc-ccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298          195 LQKLAETANKLKTLVIADEVYGHL-VFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (343)
Q Consensus       195 l~~l~~~~~~~~~~~i~D~ay~~~-~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  273 (343)
                      +++|.++|+++|+++|+|++|+.+ .+.+..   +   ..  .++++.|+||+.+++|.|+||+++++       +++++
T Consensus       143 ~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~---~---~~--~d~~~~S~~k~K~l~~~~~g~~~~~~-------~~~~~  207 (393)
T 1mdo_A          143 LDAIYALGERYGIPVIEDAAHATGTSYKGRH---I---GA--RGTAIFSFHAIKNITCAEGGIVVTDN-------PQFAD  207 (393)
T ss_dssp             HHHHHHHHHHHTCCBCEECTTCTTCEETTEE---T---TS--SSEEEEECCTTSSSCSSSCEEEEESC-------HHHHH
T ss_pred             HHHHHHHHHHcCCeEEEECccccCCeECCee---c---CC--CCeEEEeCCCCCccccccceEEEeCC-------HHHHH
Confidence            788888999999999999999963 333221   1   11  45999999955555666899999853       46777


Q ss_pred             HHhhhhccc-------------------------cCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 019298          274 RMKKYFDIL-------------------------GDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPEL  328 (343)
Q Consensus       274 ~l~~~~~~~-------------------------~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~  328 (343)
                      +++......                         ...+++..++. ...+   ..+-+..++.+++++.+.+.|.+++ +
T Consensus       208 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~-~~~l---~~~~~~~~~~~~~~~~l~~~L~~~~-~  282 (393)
T 1mdo_A          208 KLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIA-LAQL---QKLDALNARRAAIAAQYHQAMADLP-F  282 (393)
T ss_dssp             HHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHH-HHHH---HTHHHHHHHHHHHHHHHHHHHHTSS-C
T ss_pred             HHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHHhcCC-c
Confidence            776543211                         11233333332 2222   1222355556677888888888884 6


Q ss_pred             eee-CC-----CCceEeeecC
Q 019298          329 INF-KS-----TGSSLKYLDL  343 (343)
Q Consensus       329 ~~~-~~-----~~g~~~~~~l  343 (343)
                      .+. .+     .+++++|+++
T Consensus       283 ~~~~~~~~~~~~~~~~~~v~~  303 (393)
T 1mdo_A          283 QPLSLPSWEHIHAWHLFIIRV  303 (393)
T ss_dssp             EECCCCSSCEECCCSCEEEEC
T ss_pred             ccccCCCCCCCceeEEEEEEe
Confidence            643 22     4566777753

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}

Probab=99.93  E-value=1.9e-25  Score=209.64  Aligned_cols=288  Identities=12%  Similarity=0.024  Sum_probs=187.9

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      ++.++||+.+...  +.++ .+|.+.+++.+++...  ..|....+..+.+.++++++.+..+. ...++|++++|++++
T Consensus        63 G~~ylD~~~~~~~--~~lGh~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~-~~~~~v~~~~sGseA  137 (453)
T 4ffc_A           63 GNSFIDLGAGIAV--TTVGASHPAVAAAIADQATHF--THTCFMVTPYEQYVQVAELLNALTPG-DHDKRTALFNSGAEA  137 (453)
T ss_dssp             SCEEEESSHHHHT--CTTCTTCHHHHHHHHHHHHHC--SCCTTTTSCCHHHHHHHHHHHHHSSC-SSCEEEEEESSHHHH
T ss_pred             CCEEEEcCCCccc--CcCCCCCHHHHHHHHHHHHhc--cccccCcCCCHHHHHHHHHHHHhCCC-CCCcEEEEeCcHHHH
Confidence            6788999988543  2244 5899999999998754  23544445567777777777665442 135799999999999


Q ss_pred             HHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhcCc--------------eeEEeecCC--CCCCCCC--------HHHH
Q 019298          113 IDVAMALLSR--PGANILLPRPGFPIYELSAAFRHI--------------EVRHFDLLP--DKGWEVD--------LDDI  166 (343)
Q Consensus       113 l~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~--------------~~~~~~~~~--~~~~~~d--------~~~l  166 (343)
                      +..+++.+..  .+++|++.+++|+++...+...+.              .+..++...  .+.++.+        ++.|
T Consensus       138 ~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l  217 (453)
T 4ffc_A          138 VENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRI  217 (453)
T ss_dssp             HHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHH
Confidence            9999987653  458999999999887665544422              334444321  1212233        4566


Q ss_pred             HhhhcCCceEEEEeCCCCCcc--cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCc
Q 019298          167 ESLADQNTVALVIINPGNPCG--NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS  244 (343)
Q Consensus       167 ~~~~~~~~~~i~~~~p~nptG--~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~s  244 (343)
                      ++.+..+..+++++.|.|++|  ...+.+.+++|.++|++||+++|+||+|.++.+.+.. .....++..   ..+.|||
T Consensus       218 ~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~-~a~~~~~~~---pdi~t~s  293 (453)
T 4ffc_A          218 ETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAW-FASEHEGIV---PDIVTMA  293 (453)
T ss_dssp             HHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-STHHHHTCC---CSEEEEC
T ss_pred             HHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCccccc-chhhhcCCC---cchHhhh
Confidence            666655667888889977766  4457788999999999999999999999987655432 122222222   2244789


Q ss_pred             cccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhh-
Q 019298          245 KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSY-  322 (343)
Q Consensus       245 K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L-  322 (343)
                      |+++. |+|+||++++        +++++.+.... ..+++.++++++++ .++|+.... -+..++++++++.+.+.| 
T Consensus       294 K~~~~-G~~~G~~~~~--------~~i~~~~~~~~~~~t~~~~~~~~aaa-~aal~~~~~-~~~~~~~~~~~~~l~~~l~  362 (453)
T 4ffc_A          294 KGIAG-GMPLSAVTGR--------AELMDAVYAGGLGGTYGGNPVTCAAA-VAALGVMRE-LDLPARARAIEASVTSRLS  362 (453)
T ss_dssp             GGGGT-TSSCEEEEEE--------HHHHTTSCTTSSCCSSSSCHHHHHHH-HHHHHHHHH-TTHHHHHHHHHHHHHHHHH
T ss_pred             hhhcC-CcCeEEEEEC--------HHHHhhhcccCcCCCCCcCHHHHHHH-HHHHHHhhh-hhHHHHHHHHHHHHHHHHH
Confidence            99977 9999999985        36777766543 33667889988888 555542110 013444444444444444 


Q ss_pred             ---cCCCCceeeCCCCceEeeec
Q 019298          323 ---KLIPELINFKSTGSSLKYLD  342 (343)
Q Consensus       323 ---~~~~g~~~~~~~~g~~~~~~  342 (343)
                         ..+|.+.... ..|+|+|++
T Consensus       363 ~~~~~~~~~~~~~-~~g~~~~~~  384 (453)
T 4ffc_A          363 ALAEEVDIIGEVR-GRGAMLAIE  384 (453)
T ss_dssp             HHHHHCSSEEEEE-EETTEEEEE
T ss_pred             HHHhhCCCeEEEE-eeceEEEEE
Confidence               4455544323 335666654

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.93  E-value=1e-25  Score=210.31  Aligned_cols=266  Identities=15%  Similarity=0.067  Sum_probs=174.3

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++.++||+.+...  +.++ .+|.+.+++++++.......|+. ....+|++.+++++      + .+++|++++|+++
T Consensus        53 ~g~~ylD~~~~~~~--~~lG~~~p~v~~a~~~~~~~~~~~~~~~-~~~~~l~~~la~~~------~-~~~~v~~~~sGse  122 (434)
T 3l44_A           53 DGNKYIDYLAAYGP--IITGHAHPHITKAITTAAENGVLYGTPT-ALEVKFAKMLKEAM------P-ALDKVRFVNSGTE  122 (434)
T ss_dssp             TCCEEEECCGGGTT--CSSCBTCHHHHHHHHHHHHHCSCCSSCC-HHHHHHHHHHHHHC------T-TCSEEEEESSHHH
T ss_pred             CCCEEEECCCchhc--cccCCCCHHHHHHHHHHHHhCcCCCCCC-HHHHHHHHHHHHhC------C-CCCEEEEeCchHH
Confidence            37789999988744  2244 68999999999987654334543 34566777777765      2 5789999999999


Q ss_pred             HHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhcCc-eeEEeecCCCCCC--------C----CCHHHHHhhhcC--Cc
Q 019298          112 AIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHI-EVRHFDLLPDKGW--------E----VDLDDIESLADQ--NT  174 (343)
Q Consensus       112 al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~-~~~~~~~~~~~~~--------~----~d~~~l~~~~~~--~~  174 (343)
                      ++..+++.+..  ++++|++.+|+|+.+...+...+. ...........+.        .    -|+++|+++++.  ..
T Consensus       123 a~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~  202 (434)
T 3l44_A          123 AVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHE  202 (434)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGG
T ss_pred             HHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCC
Confidence            99999988764  678999999999876554433322 1111111000000        0    178999988863  33


Q ss_pred             eEEEEeCC-CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCC
Q 019298          175 VALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW  252 (343)
Q Consensus       175 ~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~  252 (343)
                      .++++++| +|++|.+. +.+.+++|.++|++||+++|+||+|.+| ..+.. .....++...+   +.||||.|+ +|+
T Consensus       203 ~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~-~~~~~~~~~~d---i~t~sK~~~-~G~  276 (434)
T 3l44_A          203 VAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYG-GAQDLLGVTPD---LTALGKVIG-GGL  276 (434)
T ss_dssp             EEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSS-CHHHHHTCCCS---EEEEEGGGG-TTS
T ss_pred             EEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-ecccc-HHHHHcCCCCC---eeehhhhhc-CCc
Confidence            45566666 55666665 8889999999999999999999999988 44332 11111222222   447899997 799


Q ss_pred             cEEEEEEeCCCCCCCchHHHHHHhhh----hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC
Q 019298          253 RLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       253 r~G~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~  324 (343)
                      |+||++++        +++++.+...    ...+++.++++++++ .++|+...+ -+..++++++++.+.+.|++
T Consensus       277 ~iG~~~~~--------~~i~~~~~~~~~~~~~~t~~~~~~a~aaa-~aal~~~~~-~~~~~~~~~~~~~l~~~L~~  342 (434)
T 3l44_A          277 PIGAYGGK--------KEIMEQVAPLGPAYQAGTMAGNPASMASG-IACLEVLQQ-EGLYEKLDELGATLEKGILE  342 (434)
T ss_dssp             SCEEEEEC--------HHHHTTBTTTSSBCCCCTTTTCHHHHHHH-HHHHHHHTS-TTHHHHHHHHHHHHHHHHHH
T ss_pred             CeeeEEEc--------HHHHHhhccCCCcccCCCCCcCHHHHHHH-HHHHHHHHc-ccHHHHHHHHHHHHHHHHHH
Confidence            99999884        4677776652    223567788888887 555542111 11455555555555555543

>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*

Probab=99.93  E-value=3.2e-25  Score=203.77  Aligned_cols=258  Identities=14%  Similarity=0.084  Sum_probs=183.3

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEecChHHHHHHHHHHhcCCCCeE
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAP--TAGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANI  127 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~v  127 (343)
                      .++++.+.+++.+...    ..|.+  .....++++.+++++.      .+. ++|++|+|+++++..+++++.++||+|
T Consensus        32 ~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~~------~~~~~~v~~~~gg~~al~~~~~~~~~~gd~v  101 (393)
T 3kgw_A           32 SNLAPRVLAAGSLRMI----GHMQKEMLQIMEEIKQGIQYVFQ------TRNPLTLVVSGSGHCAMETALFNLLEPGDSF  101 (393)
T ss_dssp             CCCCHHHHHHTTCCCC----CTTSHHHHHHHHHHHHHHHHHHT------CCCSEEEEESCCTTTHHHHHHHHHCCTTCEE
T ss_pred             CCCCHHHHHHhccccc----CcccHHHHHHHHHHHHHHHHHhC------CCCCcEEEEeCCcHHHHHHHHHhcCCCCCEE
Confidence            5678888887765322    12222  1233466677777662      233 369999999999999999999999999


Q ss_pred             EEeCCCCcc--hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298          128 LLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (343)
Q Consensus       128 l~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~  204 (343)
                      +++.++|.+  +...+...|.+++.++++.  ++.+|+++|++.+++ +++++++++|+||||.+++   +++|.++|++
T Consensus       102 l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~  176 (393)
T 3kgw_A          102 LTGTNGIWGMRAAEIADRIGARVHQMIKKP--GEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQP---LDGFGELCHR  176 (393)
T ss_dssp             EEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred             EEEeCCchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhcc---HHHHHHHHHH
Confidence            999988853  3567788899999998754  346899999999987 8999999999999999987   6788889999


Q ss_pred             cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccC-CCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc---
Q 019298          205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI-VPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD---  280 (343)
Q Consensus       205 ~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~---  280 (343)
                      ||+++|+|++|+...   . ...   ....+..+++.|+||+++ ..|  +||++++        +++++.+.....   
T Consensus       177 ~~~~li~De~~~~g~---~-~~~---~~~~~~d~~~~s~sK~~~~~~g--~g~~~~~--------~~~~~~~~~~~~~~~  239 (393)
T 3kgw_A          177 YQCLLLVDSVASLGG---V-PIY---MDQQGIDIMYSSSQKVLNAPPG--ISLISFN--------DKAKYKVYSRKTKPV  239 (393)
T ss_dssp             TTCEEEEECTTTTTT---S-CCC---TTTTTCCEEEEESSSTTCCCSS--CEEEEEC--------HHHHHHHHTCSSCCS
T ss_pred             cCCEEEEECCccccC---c-ccc---hhhcCCCEEEecCcccccCCCc--eeEEEEC--------HHHHHHHhccCCCCC
Confidence            999999999987421   1 111   122234588999999763 444  8999885        467777764321   


Q ss_pred             ---------------------cccCcchHHHHHHHhccchhhHH--HHHHHHHHHHHHHHHHHhhcCCCCceeeCCCC--
Q 019298          281 ---------------------ILGDPATFIQVCIMYGCLSTIMQ--IMIHGNFLENFAGSCVPSYKLIPELINFKSTG--  335 (343)
Q Consensus       281 ---------------------~~~~~~~~~~~a~~~~~l~~~~~--~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~--  335 (343)
                                           ..+.++...+.++ .+++....+  +-+.+++++++++.+.+.|+++ |+.+..+.+  
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~  317 (393)
T 3kgw_A          240 SFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCL-RESLALIAEQGLENCWRRHREATAHLHKHLQEM-GLKFFVKDPEI  317 (393)
T ss_dssp             CSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHH-HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSSSGGG
T ss_pred             ceeecHHHHHHhhhhccccCCCCCCCCHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhh
Confidence                                 0234455555555 444443222  2338888999999999999988 787654432  


Q ss_pred             --ceEeeec
Q 019298          336 --SSLKYLD  342 (343)
Q Consensus       336 --g~~~~~~  342 (343)
                        ++++|+.
T Consensus       318 ~~~~~~~~~  326 (393)
T 3kgw_A          318 RLPTITTVT  326 (393)
T ss_dssp             BCSSEEEEE
T ss_pred             cCCeEEEEe
Confidence              4555553

>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}

Probab=99.93  E-value=1e-24  Score=199.41  Aligned_cols=252  Identities=17%  Similarity=0.121  Sum_probs=185.7

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      +.+.++|+.+.|.      ..+ +.+++.+.+...   .|.+..+..++|+.++++++        .+++++++|+++++
T Consensus         5 ~~~~~~l~~~~~~------~~~-~~~~~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~   66 (374)
T 3uwc_A            5 RVPYSYLERQFAD------IEP-YLNDLREFIKTA---DFTLGAELEKFEKRFAALHN--------APHAIGVGTGTDAL   66 (374)
T ss_dssp             CBCSCCHHHHTSS------CHH-HHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHTT--------CSEEEEESCHHHHH
T ss_pred             cceeeccccCCCC------chH-HHHHHHHHHHcC---CcccChhHHHHHHHHHHHhC--------CCcEEEeCCHHHHH
Confidence            3567888888753      234 888888877653   56677788999999999983        34889999999999


Q ss_pred             HHHHHHh-cCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298          114 DVAMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       114 ~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~  192 (343)
                      ..+++++ .++||+|+++.|+|..+...++..|.+++.++++  +++.+|++++++.+++++++++   |+||||...+ 
T Consensus        67 ~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~-  140 (374)
T 3uwc_A           67 AMSFKMLNIGAGDEVITCANTFIASVGAIVQAGATPVLVDSE--NGYVIDPEKIEAAITDKTKAIM---PVHYTGNIAD-  140 (374)
T ss_dssp             HHHHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBC--TTSSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC-
T ss_pred             HHHHHHcCCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHhCCCCceEEE---EeCCcCCcCC-
Confidence            9999999 8999999999999999999999999999999886  5677999999999987777666   9999999854 


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCcccc-CCCCCCcccccCCCCCEEEEccCc--cccCCCCCcEEEEEEeCCCCCCCch
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVF-GDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKP  269 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~-~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~i~~~~~~~~~~~~  269 (343)
                        +++|.++|+++|+++|+|++|..+.. .+...   ..+.    .+++.|+|  |.++.+|. .|++++++       +
T Consensus       141 --~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~---~~~~----d~~~~s~~~~K~l~~~g~-~g~~~~~~-------~  203 (374)
T 3uwc_A          141 --MPALAKIAKKHNLHIVEDACQTILGRINDKFV---GSWG----QFACFSLHPLKNLNVWSD-AGVIITHS-------D  203 (374)
T ss_dssp             --HHHHHHHHHHTTCEEEEECTTCTTCEETTEET---TSSS----SEEEEECSSSSSSCCSSC-CEEEEESC-------H
T ss_pred             --HHHHHHHHHHcCCEEEEeCCCccCceeCCeec---cccc----cEEEEeCCCCCcCCccce-eEEEEeCC-------H
Confidence              77888889999999999999997432 22211   1111    37888866  99877565 78888754       4


Q ss_pred             HHHHHHhhhhcc-------------ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCC-cee
Q 019298          270 KVVERMKKYFDI-------------LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPE-LIN  330 (343)
Q Consensus       270 ~~~~~l~~~~~~-------------~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g-~~~  330 (343)
                      ++.++++.....             ....+.....+. ...+   ..+-+..++.+++.+.+.+.|.++++ +.+
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~-~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  274 (374)
T 3uwc_A          204 EYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIA-NRLM---NQLETITEKRRGIAHLYDQSFVDLSEFIDV  274 (374)
T ss_dssp             HHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHH-HHHG---GGHHHHHHHHHHHHHHHHHHTGGGTTTEEC
T ss_pred             HHHHHHHHHHhcCccccCccccccccCCCCHHHHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHhccCCCeEEe
Confidence            566666654321             111233333222 2221   22333666777788888888888866 664

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}

Probab=99.93  E-value=1.8e-24  Score=202.97  Aligned_cols=283  Identities=13%  Similarity=0.054  Sum_probs=182.1

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      ++.++||+.|.+..  .++ .+|.+.+++.+++.....   ....+..+.+.++++++.+.++  ...+ |++|+|++++
T Consensus        48 g~~~lD~~~~~~~~--~lG~~~p~v~~A~~~~~~~~~~---~~~~~~~~~~~~la~~l~~~~~--~~~~-v~~~~ggseA  119 (452)
T 3n5m_A           48 GKRYLDGMSGLWCV--NSGYGRKELAEAAYKQLQTLSY---FPMSQSHEPAIKLAEKLNEWLG--GEYV-IFFSNSGSEA  119 (452)
T ss_dssp             CCEEEETTHHHHTC--TTCBCCHHHHHHHHHHHTTCCC---CCTTSEEHHHHHHHHHHHHHHT--SCEE-EEEESSHHHH
T ss_pred             CCEEEECCcchhhc--cCCCCCHHHHHHHHHHHHhcCC---cccccCCHHHHHHHHHHHHhCC--CCce-EEEeCchHHH
Confidence            77899999885332  233 579999999999875321   2223444566666666655443  3344 9999999999


Q ss_pred             HHHHHHHhc-----C---CCCeEEEeCCCCcchHHHHHhcCce-------------eEEeecCCCCCCCC-C--------
Q 019298          113 IDVAMALLS-----R---PGANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPDKGWEV-D--------  162 (343)
Q Consensus       113 l~~~~~~l~-----~---~gd~vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~-d--------  162 (343)
                      +..+++.+.     .   ++++|++.+|+|+++...+...+..             +..++......... |        
T Consensus       120 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (452)
T 3n5m_A          120 NETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVE  199 (452)
T ss_dssp             HHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCH
T ss_pred             HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHH
Confidence            999999887     5   7799999999998876655554322             22222110000001 1        


Q ss_pred             -HHHHHhhhc----CCceEEEEeCC-CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCC
Q 019298          163 -LDDIESLAD----QNTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV  235 (343)
Q Consensus       163 -~~~l~~~~~----~~~~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~  235 (343)
                       +++|++.++    +++++++++.+ +| ||.++ +.+.+++|.++|++||+++|+||+|.++.+.+.. .....++...
T Consensus       200 ~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~-~~~~~~~~~~  277 (452)
T 3n5m_A          200 CVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKA-FGFMNYDVKP  277 (452)
T ss_dssp             HHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGTTCCC
T ss_pred             HHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCccccc-chhhhcCCCC
Confidence             789998886    34555666666 79 99766 8888999999999999999999999988665542 1222222222


Q ss_pred             CEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhh---h----hccccCcchHHHHHHHhccchhhHHHHHH
Q 019298          236 PILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK---Y----FDILGDPATFIQVCIMYGCLSTIMQIMIH  307 (343)
Q Consensus       236 ~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~---~----~~~~~~~~~~~~~a~~~~~l~~~~~~l~~  307 (343)
                      +   +.+|||+++. | +|+||++++        +++++.+..   .    ...+++.++++++++ .++|+.... -+.
T Consensus       278 d---i~t~sK~l~~-G~~~ig~~~~~--------~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa-~aal~~~~~-~~~  343 (452)
T 3n5m_A          278 D---IITMAKGITS-AYLPLSATAVK--------REIYEAFKGKGEYEFFRHINTFGGNPAACALA-LKNLEIIEN-ENL  343 (452)
T ss_dssp             S---EEEECGGGGT-TSSCCEEEEEE--------HHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHH-HHHHHHHHH-TTH
T ss_pred             C---EEeecccccC-CCcceEEEEEC--------HHHHHHHhhccCCCCccccCCCCCCHHHHHHH-HHHHHHHHh-ccH
Confidence            2   3368999876 9 999999985        367777743   1    223567788888888 555542111 113


Q ss_pred             HHHHHHHHHHHHHhh----cCCCCceeeCCCCceEeee
Q 019298          308 GNFLENFAGSCVPSY----KLIPELINFKSTGSSLKYL  341 (343)
Q Consensus       308 ~~~~~~~~~~~~~~L----~~~~g~~~~~~~~g~~~~~  341 (343)
                      .++++++.+.+.+.|    ..+|.+....+.| .|+++
T Consensus       344 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g-~~~~i  380 (452)
T 3n5m_A          344 IERSAQMGSLLLEQLKEEIGEHPLVGDIRGKG-LLVGI  380 (452)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCTTEEEEEESS-SCEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEE-EEEEE
Confidence            444444444444444    4555555434444 44444

>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}

Probab=99.93  E-value=1e-24  Score=198.16  Aligned_cols=271  Identities=11%  Similarity=0.003  Sum_probs=185.7

Q ss_pred             eeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHH
Q 019298           37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA  116 (343)
Q Consensus        37 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~  116 (343)
                      .++|+-|-      .++++.+.+++.+++.+.....+....+..++.+.+.+.+.+.+|.. ++++|++|+|+++++..+
T Consensus         5 ~~~~~p~p------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~al~~~   77 (362)
T 3ffr_A            5 KIYFTPGP------SELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELP-SNYEVLFLASATEIWERI   77 (362)
T ss_dssp             CEEECSSS------CCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCC-TTEEEEEESCHHHHHHHH
T ss_pred             ceeccCCC------cCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCCchHHHHHH
Confidence            45555443      45678888888887765431111112223345555556655555543 567899999999999999


Q ss_pred             HHHhcCCCCeEEEeCCCCcc-hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHH
Q 019298          117 MALLSRPGANILLPRPGFPI-YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHL  195 (343)
Q Consensus       117 ~~~l~~~gd~vl~~~p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l  195 (343)
                      ++++.++ +.+++..+.|.. +...++..|.+++.++.+  .++.+|+++++  ++++++++++++|+||||.+++   +
T Consensus        78 ~~~l~~~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~---l  149 (362)
T 3ffr_A           78 IQNCVEK-KSFHCVNGSFSKRFYEFAGELGREAYKEEAA--FGKGFYPADIT--VPADAEIICLTHNETSSGVSMP---V  149 (362)
T ss_dssp             HHHHCSS-EEEEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCGGGCC--CCTTCCEEEEESEETTTTEECC---H
T ss_pred             HHhccCC-cEEEEcCcHHHHHHHHHHHHhCCCeEEEecC--CCCCCCHHHHh--ccCCccEEEEEcCCCCcceeCC---H
Confidence            9999988 556666666652 334667789999998874  45678999998  6778999999999999999987   6


Q ss_pred             HHHHHHHhhc-CcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccC-CCCCcEEEEEEeCCCCCCCchHHHH
Q 019298          196 QKLAETANKL-KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI-VPGWRLGWFVTTDPCGMFRKPKVVE  273 (343)
Q Consensus       196 ~~l~~~~~~~-~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G~i~~~~~~~~~~~~~~~~  273 (343)
                      ++|.++|++| |+++|+|++|..+...    ..+..     ..+++.|+||+|+ .+|  +|+++++        +++++
T Consensus       150 ~~i~~la~~~p~~~li~D~a~~~~~~~----~~~~~-----~d~~~~s~~K~~~~~~G--~g~~~~~--------~~~~~  210 (362)
T 3ffr_A          150 EDINTFRDKNKDALIFVDAVSSLPYPK----FDWTK-----IDSVFFSVQKCFGLPAG--LGVWILN--------DRVIE  210 (362)
T ss_dssp             HHHTTSGGGSTTSEEEEECTTTTTSSC----CCTTS-----CSEEEEETTSTTCCCSC--CEEEEEE--------HHHHH
T ss_pred             HHHHHHHHhCCCCEEEEecccccCCcc----cChhH-----CcEEEEecccccCCCCc--eEEEEEC--------HHHHH
Confidence            7788889999 9999999999864321    11111     3388999999998 677  5677764        35666


Q ss_pred             HHhhhhc----------------------cccCcchHHHHHHHhccchhh--HHHHHHHHHHHHHHHHHHHhhcCCCCce
Q 019298          274 RMKKYFD----------------------ILGDPATFIQVCIMYGCLSTI--MQIMIHGNFLENFAGSCVPSYKLIPELI  329 (343)
Q Consensus       274 ~l~~~~~----------------------~~~~~~~~~~~a~~~~~l~~~--~~~l~~~~~~~~~~~~~~~~L~~~~g~~  329 (343)
                      +++....                      ..+.++...+.++ ..++...  ..+-+.+++++++++.+.+.|+++||+.
T Consensus       211 ~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~  289 (362)
T 3ffr_A          211 KSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLL-GKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFS  289 (362)
T ss_dssp             HHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHH-HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEE
T ss_pred             HhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHH-HHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCce
Confidence            6655431                      1344555555555 4444321  1123378888999999999999998988


Q ss_pred             eeCC----CCceEeeec
Q 019298          330 NFKS----TGSSLKYLD  342 (343)
Q Consensus       330 ~~~~----~~g~~~~~~  342 (343)
                      +..+    ..+..+|+.
T Consensus       290 ~~~~~~~~~~~~~~~~~  306 (362)
T 3ffr_A          290 FGVEDAKLRSMTTIVAN  306 (362)
T ss_dssp             ESSSCGGGBCSSEEEEE
T ss_pred             eccCChhhcCCceEEEe
Confidence            6552    234555553

>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}

Probab=99.93  E-value=1.5e-24  Score=198.46  Aligned_cols=254  Identities=15%  Similarity=0.084  Sum_probs=175.5

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEe
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP  130 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~  130 (343)
                      .++++.+.+++.+++..    .|.+  +..++.+.+.+++.+.+|.+.+.+.+++++|+++++..++++++++||+|+++
T Consensus        28 ~~~~~~v~~a~~~~~~~----~~~~--~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~~  101 (376)
T 3f0h_A           28 VMSSEEVRAIGAEQVPY----FRTT--EFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLVI  101 (376)
T ss_dssp             CCCCHHHHHHHTSCCCC----CSSH--HHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEEE
T ss_pred             CCCcHHHHHHhcCCCCC----CCCH--HHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccCCCCeEEEE
Confidence            56788888887765421    2222  23355555555555545543223445568999999999999999999999999


Q ss_pred             CCCCcchH--HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcE
Q 019298          131 RPGFPIYE--LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTL  208 (343)
Q Consensus       131 ~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~  208 (343)
                      +|+|.+..  ..+...|.++..++.+  .++.+|++++++.++++++++++++|+||||.+++   +++|+++|++||++
T Consensus       102 ~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~  176 (376)
T 3f0h_A          102 DGGSFGHRFVQLCEIHEIPYVALKLE--HGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYD---TMMIGEFCKKNNMF  176 (376)
T ss_dssp             ESSHHHHHHHHHHHHTTCCEEEEECC--TTCCCCHHHHHTTTTSCCCEEEEESEETTTTEECC---HHHHHHHHHHTTCE
T ss_pred             eCChhhHHHHHHHHHcCCceEEEeCC--CCCCCCHHHHHHhhccCceEEEEecccCCcceecC---HHHHHHHHHHcCCE
Confidence            99776643  3466678899888875  35679999999988888999999999999999988   78889999999999


Q ss_pred             EEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccC-CCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-------
Q 019298          209 VIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWI-VPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-------  280 (343)
Q Consensus       209 ~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-------  280 (343)
                      +|+|++|..+...    ..+...   +..+++.|+||+++ .+|  +|+++++        +++++++.....       
T Consensus       177 li~D~~~~~~~~~----~~~~~~---~~d~~~~s~~K~l~~~~G--~g~~~~~--------~~~~~~~~~~~~~~~~~~~  239 (376)
T 3f0h_A          177 FVCDCVSAFLADP----FNMNEC---GADVMITGSQKVLACPPG--ISVIVLA--------PRGVERVEKSKVRTMYFDL  239 (376)
T ss_dssp             EEEECTTTTTTSC----CCHHHH---TCSEEEEETTTTTCCCSS--CEEEEEC--------HHHHHHHHTCCCCCSTTCH
T ss_pred             EEEEcCccccCcc----cccccc---CccEEEecCcccccCCCc--eEEEEEC--------HHHHHHhhcCCCCceeecH
Confidence            9999999864321    111111   23489999999988 566  5777774        367777764211       


Q ss_pred             -----------cccCcchHHHHHHHhccchhhHH---HHHHHHHHHHHHHHHHHhhcCCCCceeeCCC
Q 019298          281 -----------ILGDPATFIQVCIMYGCLSTIMQ---IMIHGNFLENFAGSCVPSYKLIPELINFKST  334 (343)
Q Consensus       281 -----------~~~~~~~~~~~a~~~~~l~~~~~---~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~  334 (343)
                                 ....++.....++ .+++....+   +-+.+++++++++.+.+.|+++ |+.+..+.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~  305 (376)
T 3f0h_A          240 KDALKNQERGQTPFTPAVGILLQI-NERLKEIKKHGGADAEVARIASQAADFRAKIKDL-PFELVSES  305 (376)
T ss_dssp             HHHHHHHTTTCCSSCCCHHHHHHH-HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTS-SEEECCSS
T ss_pred             HHHHhhcccCCCCCCCcHHHHHHH-HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCccCccc
Confidence                       0122333222333 333332222   2337888889999999999988 67654443

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*

Probab=99.93  E-value=3e-24  Score=201.93  Aligned_cols=290  Identities=14%  Similarity=0.059  Sum_probs=189.9

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++.++||+.|...  ..++ .+|.+.+++.+++.+... .|....+..++++++++.+.+..  +.+.++|++++|+++
T Consensus        49 ~G~~~lD~~~~~~~--~~lG~~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~--~~~~~~v~~~~gGse  123 (460)
T 3gju_A           49 NGRKSIDAFAGLYC--VNVGYGRQKIADAIATQAKNLAY-YHAYVGHGTEASITLAKMIIDRA--PKGMSRVYFGLSGSD  123 (460)
T ss_dssp             TCCEEEETTHHHHT--CTTCBCCHHHHHHHHHHHHHHSC-CCCCTTCCCHHHHHHHHHHHHHS--CTTEEEEEEESSHHH
T ss_pred             CCCEEEECCcchhh--ccCCCCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHhhC--CCCcCEEEEeCchHH
Confidence            37788999988432  2233 579999999998875321 34444455567777777776643  346789999999999


Q ss_pred             HHHHHHHHhcC--------CCCeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCC--C-CCCCCC-----
Q 019298          112 AIDVAMALLSR--------PGANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLP--D-KGWEVD-----  162 (343)
Q Consensus       112 al~~~~~~l~~--------~gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~--~-~~~~~d-----  162 (343)
                      ++..+++.+..        .+++|++.+|+|+++...+...+.             .+..++...  . ++.+.+     
T Consensus       124 A~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~  203 (460)
T 3gju_A          124 ANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFS  203 (460)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHH
Confidence            99999998863        468999999999887665554422             233333211  0 112233     


Q ss_pred             ---HHHHHhhhcC---CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC
Q 019298          163 ---LDDIESLADQ---NTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST  234 (343)
Q Consensus       163 ---~~~l~~~~~~---~~~~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~  234 (343)
                         +++|++.+..   +..++++++| +|++|. +++.+.+++|.++|++||+++|+||+|.++...+.. .....++..
T Consensus       204 ~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~-~~~~~~~~~  282 (460)
T 3gju_A          204 QHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTM-FGSDHYGIK  282 (460)
T ss_dssp             HHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-CHHHHHTCC
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccc-chHhhcCCC
Confidence               5788887752   3334455555 677776 678889999999999999999999999987655432 112222222


Q ss_pred             CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh-------h-hccccCcchHHHHHHHhccchhh--HHH
Q 019298          235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK-------Y-FDILGDPATFIQVCIMYGCLSTI--MQI  304 (343)
Q Consensus       235 ~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~-------~-~~~~~~~~~~~~~a~~~~~l~~~--~~~  304 (343)
                      .+   +.+|||+++..++|+||++++        +++++.+..       . ...+++.++++++++ .++|+..  ..+
T Consensus       283 pd---i~t~sK~l~gG~~~lg~v~~~--------~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa-~aal~~~~~~~~  350 (460)
T 3gju_A          283 PD---LITIAKGLTSAYAPLSGVIVA--------DRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAG-VANLELIDEMDL  350 (460)
T ss_dssp             CS---EEEECGGGTTTSSCCEEEEEE--------HHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHH-HHHHHHHHHTTH
T ss_pred             CC---eeeeehhhcCCCCCeEEEEEC--------HHHHHHHhcccccccccccCCCCCCCHHHHHHH-HHHHHHHHhccH
Confidence            23   236899976533899999985        478888853       1 223567888888888 5666521  233


Q ss_pred             HH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeee
Q 019298          305 MI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYL  341 (343)
Q Consensus       305 l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~  341 (343)
                      ++ .++..+..++.+.+.+.++|.+....+.| .|+++
T Consensus       351 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g-~~~~~  387 (460)
T 3gju_A          351 VTNAGETGAYFRAELAKAVGGHKNVGEVRGDG-MLAAV  387 (460)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSTTEEEEEEET-TEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCeEEEeeee-EEEEE
Confidence            33 44455555666666666776555434444 45444

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}

Probab=99.93  E-value=1e-24  Score=204.41  Aligned_cols=289  Identities=16%  Similarity=0.127  Sum_probs=188.1

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC-CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT-AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      +..++|++.+.+....++ .+|.+.+++.+++....   +... .+..++++.+++.+.+.+  +.++++|++++|++++
T Consensus        49 g~~~lD~~~~~~~~~lG~-~~~~v~~a~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~--~~~~~~v~~~~ggsea  122 (449)
T 3a8u_X           49 GRKVYDSLSGLWTCGAGH-TRKEIQEAVAKQLSTLD---YSPGFQYGHPLSFQLAEKITDLT--PGNLNHVFFTDSGSEC  122 (449)
T ss_dssp             CCEEEETTHHHHTCTTCB-SCHHHHHHHHHHTTTCS---CCCSSSCCCHHHHHHHHHHHTTS--STTEEEEEEESSHHHH
T ss_pred             CCEEEECCccHhhccCCC-CCHHHHHHHHHHHHhCC---CccccccCCHHHHHHHHHHHHhC--CCCCCEEEEcCcHHHH
Confidence            567889987764321222 37999999999986532   2111 233456666666665543  3467899999999999


Q ss_pred             HHHHHHHhcC--------CCCeEEEeCCCCcchHH-HHHhcCc------------eeEEeecCC--CCC-CCCC------
Q 019298          113 IDVAMALLSR--------PGANILLPRPGFPIYEL-SAAFRHI------------EVRHFDLLP--DKG-WEVD------  162 (343)
Q Consensus       113 l~~~~~~l~~--------~gd~vl~~~p~~~~~~~-~~~~~g~------------~~~~~~~~~--~~~-~~~d------  162 (343)
                      +..+++.+..        ++|+|++.+|+|+++.. .....|.            ++..++...  ... .++|      
T Consensus       123 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~  202 (449)
T 3a8u_X          123 ALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGI  202 (449)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHH
Confidence            9999988764        67999999999987643 3443331            233343321  111 1246      


Q ss_pred             --HHHHHhhhcC---CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCC
Q 019298          163 --LDDIESLADQ---NTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV  235 (343)
Q Consensus       163 --~~~l~~~~~~---~~~~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~  235 (343)
                        +++|++.++.   +...+++++| +|+||. ..+.+.+++|.++|++||+++|+||+|.++.+.+.. ..+..++...
T Consensus       203 ~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~-~~~~~~~~~~  281 (449)
T 3a8u_X          203 ALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSM-FGADSFGVTP  281 (449)
T ss_dssp             HHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SHHHHHTCCC
T ss_pred             HHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcc-hhhhhcCCCC
Confidence              8999988863   2335566777 478997 567899999999999999999999999876544431 1222222222


Q ss_pred             CEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhh----------hccccCcchHHHHHHHhccchhhHHH
Q 019298          236 PILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY----------FDILGDPATFIQVCIMYGCLSTIMQI  304 (343)
Q Consensus       236 ~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~a~~~~~l~~~~~~  304 (343)
                      +++   |+||.|+. | +|+||++++        +++++.+...          ...+++.++++++++ .++|+...+ 
T Consensus       282 di~---s~sK~l~~-G~~~~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~-~aal~~~~~-  347 (449)
T 3a8u_X          282 DLM---CIAKQVTN-GAIPMGAVIAS--------TEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAG-LAALCLLQK-  347 (449)
T ss_dssp             SEE---EECGGGGT-TSSCCEEEEEE--------HHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHH-HHHHHHHHH-
T ss_pred             CEE---EEcccccC-CCCceEEEEEC--------HHHHHHhhccCcccccccccccCCCcccHHHHHHH-HHHHHHHHh-
Confidence            333   88999875 7 999999985        3678877653          122456678877777 455432111 


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCcee--eCCCCceEeeecC
Q 019298          305 MIHGNFLENFAGSCVPSYKLIPELIN--FKSTGSSLKYLDL  343 (343)
Q Consensus       305 l~~~~~~~~~~~~~~~~L~~~~g~~~--~~~~~g~~~~~~l  343 (343)
                      .+..++++++++.+.+.|++++++..  ..+..|+|+|+++
T Consensus       348 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~  388 (449)
T 3a8u_X          348 ENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQI  388 (449)
T ss_dssp             TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEE
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEE
Confidence            12677788888888888876533331  1234567888753

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*

Probab=99.93  E-value=3.8e-24  Score=199.96  Aligned_cols=274  Identities=13%  Similarity=0.044  Sum_probs=188.6

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  110 (343)
                      ++.++||+.|...  ..++ .+|.+.+++.+++.....  ..|. .....++++.+++++        ..+++++++|++
T Consensus        75 g~~ylD~~sg~~~--~~lgh~~p~v~~Ai~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~--------g~~~v~~~~sGs  143 (439)
T 2oat_A           75 GRKYFDFLSSYSA--VNQGHCHPKIVNALKSQVDKLTLTSRAFY-NNVLGEYEEYITKLF--------NYHKVLPMNTGV  143 (439)
T ss_dssp             CCEEEESSGGGGT--TTTCBTCHHHHHHHHHHHTTCSCCCTTSE-ESSHHHHHHHHHHHH--------TCSEEEEESSHH
T ss_pred             CCEEEEccCCccc--ccCCCCCHHHHHHHHHHHHhcCcccCccC-CHHHHHHHHHHHHhc--------CCCEEEEeCCHH
Confidence            5678899888643  3466 889999999999875321  1232 234567778887776        258999999999


Q ss_pred             HHHHHHHHHhc---------CCC-CeEEEeCCCCcchHH-HHHhcC------------ceeEEeecCCCCCCCCCHHHHH
Q 019298          111 QAIDVAMALLS---------RPG-ANILLPRPGFPIYEL-SAAFRH------------IEVRHFDLLPDKGWEVDLDDIE  167 (343)
Q Consensus       111 ~al~~~~~~l~---------~~g-d~vl~~~p~~~~~~~-~~~~~g------------~~~~~~~~~~~~~~~~d~~~l~  167 (343)
                      +++..+++.+.         .+| |.|++.+|+|+++.. .....|            .++..++.       .|+++|+
T Consensus       144 eA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le  216 (439)
T 2oat_A          144 EAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPALE  216 (439)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-------SCHHHHH
T ss_pred             HHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-------CCHHHHH
Confidence            99999998864         356 899999999977543 334334            24444432       2799999


Q ss_pred             hhhc-CCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCc
Q 019298          168 SLAD-QNTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS  244 (343)
Q Consensus       168 ~~~~-~~~~~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~s  244 (343)
                      +.++ ++++ +++++| +|++|. .++.+++++|.++|++||+++|+||+|.++.+.+... .+..++...+++   |+|
T Consensus       217 ~~l~~~~~~-~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~-~~~~~~~~~Di~---t~s  291 (439)
T 2oat_A          217 RALQDPNVA-AFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWL-AVDYENVRPDIV---LLG  291 (439)
T ss_dssp             HHTTSTTEE-EEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EEC
T ss_pred             HHhCCCCEE-EEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcch-hHHHhCCCCcEE---Eec
Confidence            9985 4454 455566 578896 4688999999999999999999999998775544321 112222222322   899


Q ss_pred             cccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhh
Q 019298          245 KRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSY  322 (343)
Q Consensus       245 K~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L  322 (343)
                      |.++ +| +|+||+++++        ++++.++.. ...+++.++++++++ .++|+...+ .+..++++++++.+.+.|
T Consensus       292 K~l~-~G~~~~G~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aaa-~aal~~~~~-~~~~~~~~~~~~~l~~~L  360 (439)
T 2oat_A          292 KALS-GGLYPVSAVLCDD--------DIMLTIKPGEHGSTYGGNPLGCRVA-IAALEVLEE-ENLAENADKLGIILRNEL  360 (439)
T ss_dssp             GGGG-TTSSCCEEEEECH--------HHHTTSCTTSSCCSSTTCHHHHHHH-HHHHHHHHH-TTHHHHHHHHHHHHHHHH
T ss_pred             cccc-CCCCCeEEEEECH--------HHHhccCCCCcccCCCcCHHHHHHH-HHHHHHHhh-hhHHHHHHHHHHHHHHHH
Confidence            9987 48 9999999953        566666543 223456788887777 455442211 126788889999999999


Q ss_pred             cCCCCcee--eCCCCceEeeec
Q 019298          323 KLIPELIN--FKSTGSSLKYLD  342 (343)
Q Consensus       323 ~~~~g~~~--~~~~~g~~~~~~  342 (343)
                      +++ ++.+  ..+..|+++|++
T Consensus       361 ~~l-~~~~~~~~~~~g~~~~v~  381 (439)
T 2oat_A          361 MKL-PSDVVTAVRGKGLLNAIV  381 (439)
T ss_dssp             TTS-CTTTEEEEEEETTEEEEE
T ss_pred             HHh-cCCCcEEEEeeeeEEEEE
Confidence            886 4442  123356777765

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*

Probab=99.93  E-value=2.3e-24  Score=202.57  Aligned_cols=289  Identities=12%  Similarity=0.075  Sum_probs=189.2

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++.++||+.+...  +.++ .+|.+.+++.+++.+... .|....+..+.++++++++.+.++  .+.++|++++|+++
T Consensus        48 ~g~~ylD~~~~~~~--~~lG~~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~ggse  122 (459)
T 4a6r_A           48 EGNKIIDGMAGLWC--VNVGYGRKDFAEAARRQMEELPF-YNTFFKTTHPAVVELSSLLAEVTP--AGFDRVFYTNSGSE  122 (459)
T ss_dssp             TCCEEEETTHHHHT--CTTCBCCHHHHHHHHHHHHHCSC-CCTTSSSCCHHHHHHHHHHHHHSC--TTCCEEEEESSHHH
T ss_pred             CCCEEEECCCchhc--ccCCCCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHH
Confidence            36788999988533  2233 579999999999875432 344434556777778887776543  46789999999999


Q ss_pred             HHHHHHHHhcC--------CCCeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCC--C-CCCCCC-----
Q 019298          112 AIDVAMALLSR--------PGANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLP--D-KGWEVD-----  162 (343)
Q Consensus       112 al~~~~~~l~~--------~gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~--~-~~~~~d-----  162 (343)
                      ++..+++.+..        ++++|++.+|+|+++...+...+.             .+..++...  . +.+ +|     
T Consensus       123 A~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~  201 (459)
T 4a6r_A          123 SVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFG  201 (459)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHH
Confidence            99999999875        578999999999988766555432             222232111  0 111 34     


Q ss_pred             ---HHHHHhhhcC---CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC
Q 019298          163 ---LDDIESLADQ---NTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST  234 (343)
Q Consensus       163 ---~~~l~~~~~~---~~~~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~  234 (343)
                         +++|++.+..   +..++++++| +|++|. .++.+.+++|.++|++||+++|+||+|.++...+.. .....++..
T Consensus       202 ~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~-~~~~~~~~~  280 (459)
T 4a6r_A          202 VVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEW-FGHQHFGFQ  280 (459)
T ss_dssp             HHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-SHHHHHTCC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccc-chHhhcCCC
Confidence               7888887752   3456666677 455565 458899999999999999999999999988665532 122222222


Q ss_pred             CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHh---hh-hccccCcchHHHHHHHhccchhh--HHHHH-H
Q 019298          235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK---KY-FDILGDPATFIQVCIMYGCLSTI--MQIMI-H  307 (343)
Q Consensus       235 ~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~---~~-~~~~~~~~~~~~~a~~~~~l~~~--~~~l~-~  307 (343)
                      .+++   +|||+++..|+|+||++++        +++++.+.   .. ...+++.++++++++ .++|+..  ..+++ .
T Consensus       281 pdi~---t~sK~l~gg~~~lg~v~~~--------~~i~~~~~~~~~~~~~~t~~~~~~~~aaa-~aal~~~~~~~~~~~~  348 (459)
T 4a6r_A          281 PDLF---TAAKGLSSGYLPIGAVFVG--------KRVAEGLIAGGDFNHGFTYSGHPVCAAVA-HANVAALRDEGIVQRV  348 (459)
T ss_dssp             CSEE---EECGGGGTTSSCCEEEEEC--------HHHHHHHHHHCTTHHHHHHCSCHHHHHHH-HHHHHHHHHTCHHHHH
T ss_pred             CCee---ehhhhhcCCCCCccceeeC--------HHHHHHhhcCCCcccCCCCCCCHHHHHHH-HHHHHHHhcchHHHHH
Confidence            2333   6799987766999999985        47888876   22 223567888888888 5555421  12222 2


Q ss_pred             H-HHHHHHHHHHHHhhcCCCCceeeCCCCceEeee
Q 019298          308 G-NFLENFAGSCVPSYKLIPELINFKSTGSSLKYL  341 (343)
Q Consensus       308 ~-~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~  341 (343)
                      + +..+..++.+.+.|..+|.+....+.| .|+++
T Consensus       349 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~g-~~~~~  382 (459)
T 4a6r_A          349 KDDIGPYMQKRWRETFSRFEHVDDVRGVG-MVQAF  382 (459)
T ss_dssp             HHTHHHHHHHHHHHHHTTCTTEEEEEEET-TEEEE
T ss_pred             HHHHHHHHHHHHHHHHhcCCCeEEEEEEE-EEEEE
Confidence            2 233334444444555565555444444 44444

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*

Probab=99.93  E-value=3.8e-24  Score=197.53  Aligned_cols=214  Identities=18%  Similarity=0.137  Sum_probs=160.3

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH----HhcCceeEEee
Q 019298           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFD  152 (343)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~  152 (343)
                      ....++++.++++++        .++.++++++++++..++++++++||+|+++.|+|+++...+    ...|.++..++
T Consensus        65 ~~~~~l~~~la~~~g--------~~~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~  136 (398)
T 1gc0_A           65 PTLNLLEARMASLEG--------GEAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVD  136 (398)
T ss_dssp             HHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEEC
T ss_pred             hHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEEC
Confidence            456788899988883        235566666689999999999999999999999999887765    56788888876


Q ss_pred             cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (343)
Q Consensus       153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~  232 (343)
                      .       .|++++++.++++++++++++|+||||.+.+   +++|.++|+++|+++|+|++|..+.+..    ++ .  
T Consensus       137 ~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~----~~-~--  199 (398)
T 1gc0_A          137 M-------ADLQALEAAMTPATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQR----PL-E--  199 (398)
T ss_dssp             T-------TCHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCC----GG-G--
T ss_pred             C-------CCHHHHHHhcCCCCeEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcccccCC----ch-h--
Confidence            4       2799999999888999999999999999975   7888999999999999999999765432    11 1  


Q ss_pred             CCCCEEEEccCccccCCCCCcE-EEEEEeCCCCCCCchHHHH-HHhhhhcc--ccCcchHHHHHHHhccchhhHHHHHHH
Q 019298          233 STVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVE-RMKKYFDI--LGDPATFIQVCIMYGCLSTIMQIMIHG  308 (343)
Q Consensus       233 ~~~~~i~~~S~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~-~l~~~~~~--~~~~~~~~~~a~~~~~l~~~~~~l~~~  308 (343)
                       .+.++++.|+||.|+++|.|+ ||+++++        ++++ .++.....  .+..+++.+.++ ...++.   +....
T Consensus       200 -~~~d~~~~S~sK~~~~~~~~~~G~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~---~~~~~  266 (398)
T 1gc0_A          200 -LGADLVVHSATKYLSGHGDITAGIVVGSQ--------ALVDRIRLQGLKDMTGAVLSPHDAALL-MRGIKT---LNLRM  266 (398)
T ss_dssp             -GTCSEEEEETTTTTTCSSSCCCEEEEECH--------HHHHHHHHTHHHHHTCCCCCHHHHHHH-HHHHTT---HHHHH
T ss_pred             -hCceEEEECCccccCCCCCCeEEEEEECh--------HHHHHHHHHHhhccCCCCCCHHHHHHH-Hhccch---HHHHH
Confidence             234599999999999999998 9988853        4444 45544332  345677766665 333322   22355


Q ss_pred             HHHHHHHHHHHHhhcCCCCc
Q 019298          309 NFLENFAGSCVPSYKLIPEL  328 (343)
Q Consensus       309 ~~~~~~~~~~~~~L~~~~g~  328 (343)
                      ++..++.+.+.+.|+++|++
T Consensus       267 ~~~~~~~~~l~~~L~~~~~v  286 (398)
T 1gc0_A          267 DRHCANAQVLAEFLARQPQV  286 (398)
T ss_dssp             HHHHHHHHHHHHHHHTCTTE
T ss_pred             HHHHHHHHHHHHHHhcCCCe
Confidence            66667777777777665443

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}

Probab=99.93  E-value=5.7e-25  Score=206.43  Aligned_cols=276  Identities=16%  Similarity=0.061  Sum_probs=176.9

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      +..++||+.+.+....++ .+|.+.+++.+++....  .|   .+..++++++++++.+.++   .+++|++++|+++++
T Consensus        56 g~~~iD~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~--~~---~~~~~~~~~la~~l~~~~~---~~~~v~~~~gg~eA~  126 (453)
T 2cy8_A           56 GNVYLDFFGGHGALVLGH-GHPRVNAAIAEALSHGV--QY---AASHPLEVRWAERIVAAFP---SIRKLRFTGSGTETT  126 (453)
T ss_dssp             CCEEEESCTTTTSCTTCB-TCHHHHHHHHHHHTTTC--SS---CSSCHHHHHHHHHHHHHCT---TCSEEEEESCHHHHH
T ss_pred             CCEEEECcccHhhcccCC-CCHHHHHHHHHHHHhCC--CC---CCCCHHHHHHHHHHHhhCC---CCCEEEEeCCHHHHH
Confidence            567899998875422222 78999999999987532  23   2456899999999987654   578999999999999


Q ss_pred             HHHHHH---hcCCCCeEEEeCCCCcchHHHHHh-----------cCce------eEEeecCCCCCCCCCHHHHHhhhcC-
Q 019298          114 DVAMAL---LSRPGANILLPRPGFPIYELSAAF-----------RHIE------VRHFDLLPDKGWEVDLDDIESLADQ-  172 (343)
Q Consensus       114 ~~~~~~---l~~~gd~vl~~~p~~~~~~~~~~~-----------~g~~------~~~~~~~~~~~~~~d~~~l~~~~~~-  172 (343)
                      ..+++.   +.++ +.|++.+|+|+++...+..           .|..      +..++.       .|+++|++.+++ 
T Consensus       127 ~~al~~ar~~~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~  198 (453)
T 2cy8_A          127 LLALRVARAFTGR-RMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-------DDIEGMREVFANH  198 (453)
T ss_dssp             HHHHHHHHHHHCC-CEEEEECC----------------------------CGGGEEEECT-------TCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCC-CEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-------CCHHHHHHHHHhc
Confidence            999988   6654 6888888999866543322           1221      222211       379999988863 


Q ss_pred             -CceEEEEeCC-CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCC
Q 019298          173 -NTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV  249 (343)
Q Consensus       173 -~~~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~  249 (343)
                       ....+++++| +||||.+. +.+++++|.++|++||+++|+||+|.++ ..+. ......++...+   +.|+||+++.
T Consensus       199 ~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~-~~~~~~~~~~~d---i~s~sK~l~~  273 (453)
T 2cy8_A          199 GSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGN-HGMQALLDVQPD---LTCLAKASAG  273 (453)
T ss_dssp             GGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCT-THHHHHHTCCCS---EEEEEGGGGT
T ss_pred             CCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCc-hhhhHHhCCCCc---EEEEChhhhC
Confidence             2335566777 47799764 7999999999999999999999999987 4332 111111221122   2389999885


Q ss_pred             CCCcEEEEEEeCCCCCCCchHHHHHHhh---h---hccccCcchHHHHHHHhccchh-hHHHHHHHHHHHHHHHHHHHhh
Q 019298          250 PGWRLGWFVTTDPCGMFRKPKVVERMKK---Y---FDILGDPATFIQVCIMYGCLST-IMQIMIHGNFLENFAGSCVPSY  322 (343)
Q Consensus       250 ~G~r~G~i~~~~~~~~~~~~~~~~~l~~---~---~~~~~~~~~~~~~a~~~~~l~~-~~~~l~~~~~~~~~~~~~~~~L  322 (343)
                       |+|+||+++++        ++++.+..   .   ...+++.++++++++ .++|+. .  .-+..++++++++.+.+.|
T Consensus       274 -G~~~G~v~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~-~aal~~~~--~~~~~~~~~~~~~~l~~~L  341 (453)
T 2cy8_A          274 -GLPGGILGGRE--------DVMGVLSRGSDRKVLHQGTFTGNPITAAAA-IAAIDTIL--EDDVCAKINDLGQFAREAM  341 (453)
T ss_dssp             -TSSCEEEEECH--------HHHTTSSSCC---------CCCCHHHHHHH-HHHHHHHH--HTTHHHHHHHHHHHHHHHH
T ss_pred             -CcceEEEechH--------HHHHHhccccCCCceeCCCCCCCHHHHHHH-HHHHHHHh--hhhHHHHHHHHHHHHHHHH
Confidence             99999999853        56666654   1   222456788888777 555543 2  1125667777777777777


Q ss_pred             cCCC---CceeeCCCCceEeeecC
Q 019298          323 KLIP---ELINFKSTGSSLKYLDL  343 (343)
Q Consensus       323 ~~~~---g~~~~~~~~g~~~~~~l  343 (343)
                      +++.   ++....+..|.++|+++
T Consensus       342 ~~~~~~~~~~~~~~~~g~~~~i~~  365 (453)
T 2cy8_A          342 NHLFARKGLNWLAYGRFSGFHLMP  365 (453)
T ss_dssp             HHHHHHTTCCEEEECCTTEEEEEE
T ss_pred             HHHHhhCCCcEEEEEeeeEEEEEE
Confidence            5431   23321234566778753

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*

Probab=99.93  E-value=4.5e-24  Score=196.56  Aligned_cols=216  Identities=16%  Similarity=0.126  Sum_probs=167.8

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH----HhcCceeEEee
Q 019298           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFD  152 (343)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~  152 (343)
                      ....++++.++++++        .+++++++|+++++..++++++++||+|+++.|+|+++...+    ...|.++..++
T Consensus        66 ~~~~~l~~~la~~~g--------~~~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~  137 (392)
T 3qhx_A           66 PTRTALEAALAAVED--------AAFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVA  137 (392)
T ss_dssp             HHHHHHHHHHHHHTT--------CSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred             hHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeC
Confidence            345678889988873        347899999999999999999999999999999998776665    66788888886


Q ss_pred             cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (343)
Q Consensus       153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~  232 (343)
                      .+       |++++++++++++++|++++|+||||.+.+   +++|+++|+++|+++|+|++|+.+....    +. .  
T Consensus       138 ~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~~~----~~-~--  200 (392)
T 3qhx_A          138 LA-------DLDAVRAAIRPTTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPALQQ----PL-S--  200 (392)
T ss_dssp             TT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTCC----GG-G--
T ss_pred             CC-------CHHHHHHhhCCCCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCcccccCC----hH-H--
Confidence            52       799999999989999999999999999965   7888999999999999999998643221    11 1  


Q ss_pred             CCCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHHHHHH
Q 019298          233 STVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMIHGNF  310 (343)
Q Consensus       233 ~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~  310 (343)
                       .+..+++.|+||.++.+| .++||+++++       +++.+.++.... .....++..+.++ ...+.   .+....++
T Consensus       201 -~~~di~~~S~sK~lg~~g~~~~G~v~~~~-------~~~~~~l~~~~~~~g~~~~~~~~~~~-~~~l~---~l~~~~~~  268 (392)
T 3qhx_A          201 -LGADVVLHSTTKYIGGHSDVVGGALVTND-------EELDQSFAFLQNGAGAVPGPFDAYLT-MRGLK---TLVLRMQR  268 (392)
T ss_dssp             -GTCSEEEEETTTTTTCSSCCCCEEEEESC-------HHHHHHHHHHHHHHCCCCCHHHHHHH-HHHHT---THHHHHHH
T ss_pred             -hCCcEEEEcCccccCCCCCceEEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHH-Hhhhh---HHHHHHHH
Confidence             134499999999999988 7999999853       467777776643 3456677766666 23332   12235667


Q ss_pred             HHHHHHHHHHhhcCCCCce
Q 019298          311 LENFAGSCVPSYKLIPELI  329 (343)
Q Consensus       311 ~~~~~~~~~~~L~~~~g~~  329 (343)
                      ..++.+.+.+.|+.+|++.
T Consensus       269 ~~~~~~~l~~~L~~~~~v~  287 (392)
T 3qhx_A          269 HSENAAAVAEFLAEHPAIS  287 (392)
T ss_dssp             HHHHHHHHHHHHHTCTTEE
T ss_pred             HHHHHHHHHHHHhcCCCcc
Confidence            7788888888888877765

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.93  E-value=1.6e-24  Score=201.01  Aligned_cols=279  Identities=14%  Similarity=0.077  Sum_probs=178.8

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA------PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~------~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g  108 (343)
                      ...++|..+.      ...++.+++++.+++.+.....|+      ......++++.+.+.+.+.+|  .++++|++++|
T Consensus        25 ~~~i~l~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g--~~~~~i~~~sG   96 (417)
T 3n0l_A           25 CEGLEMIASE------NFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFN--CKFANVQPNSG   96 (417)
T ss_dssp             HHSEECCTTC------CCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CSEEECCCSSH
T ss_pred             hcCeeeeccc------CCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhC--CCCcceEeccH
Confidence            3567886655      234899999998887443222333      222224555544334433333  45667888777


Q ss_pred             hHHHHHHHHHHhcCCCCeEEEeCCCCcchHH---HHHhcCceeEEeecCCCCCCCCCHHHHHhhhc-CCceEEEEeCCCC
Q 019298          109 CTQAIDVAMALLSRPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-QNTVALVIINPGN  184 (343)
Q Consensus       109 ~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~p~n  184 (343)
                       ++++..++++++++||+|+++.|+|..+..   .....|..+..+++..++++.+|+++|+++++ +++++|++++|+|
T Consensus        97 -t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~  175 (417)
T 3n0l_A           97 -SQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKEKPKLIVCGASAY  175 (417)
T ss_dssp             -HHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHHHCCSEEEECCSSC
T ss_pred             -HHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHhcCCeEEEECCccc
Confidence             799999999999999999999999977544   33334444433333333567799999999997 5889988888886


Q ss_pred             CcccccCHHHHHHHHHHHhhcCcEEEEccCCC-ccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCC
Q 019298          185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYG-HLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPC  263 (343)
Q Consensus       185 ptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~  263 (343)
                        |..++   +++|.++|++||+++|+|++|. +..+.+..+..+.     ...++++|+||+|  +|.|+||+++++  
T Consensus       176 --G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-----~~di~~~s~sK~l--~g~~~G~~~~~~--  241 (417)
T 3n0l_A          176 --ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP-----YAHVVSSTTHKTL--RGPRGGIIMTND--  241 (417)
T ss_dssp             --CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-----TCSEEEEESSTTT--CSCSCEEEEESC--
T ss_pred             --CccCC---HHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc-----cceEEEeeCcccc--CCCCeeEEEECC--
Confidence              77766   7888999999999999999964 3444433222221     2348999999996  788899999863  


Q ss_pred             CCCCchHHHHHHhhhhcc--ccCcchHHHHHHHhccchh-h-HHHHHHHHHHHHHHHHHHHhhcCCCCceeeC-CCCceE
Q 019298          264 GMFRKPKVVERMKKYFDI--LGDPATFIQVCIMYGCLST-I-MQIMIHGNFLENFAGSCVPSYKLIPELINFK-STGSSL  338 (343)
Q Consensus       264 ~~~~~~~~~~~l~~~~~~--~~~~~~~~~~a~~~~~l~~-~-~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~-~~~g~~  338 (343)
                           +++++.++.....  ..+++.....++ ..++.. . ..+.+.++++.++++.+.+.|.+. |+.+.. +..+++
T Consensus       242 -----~~~~~~~~~~~~~~~~~~~~~~~~aa~-~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~  314 (417)
T 3n0l_A          242 -----EELAKKINSAIFPGIQGGPLMHVIAAK-AVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDR-KFKLVSDGTDNHL  314 (417)
T ss_dssp             -----HHHHHHHHHHHTTTTCSSCCHHHHHHH-HHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSE
T ss_pred             -----HHHHHHHhhhhCCcccCCcHHHHHHHH-HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCceE
Confidence                 4677877766432  223344444444 333332 1 233448888888999999999884 787533 356777


Q ss_pred             eeecC
Q 019298          339 KYLDL  343 (343)
Q Consensus       339 ~~~~l  343 (343)
                      +|+++
T Consensus       315 ~~~~~  319 (417)
T 3n0l_A          315 VLMSF  319 (417)
T ss_dssp             EEEEC
T ss_pred             EEEEc
Confidence            77753

>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B

Probab=99.93  E-value=1.4e-24  Score=200.66  Aligned_cols=193  Identities=15%  Similarity=0.096  Sum_probs=147.0

Q ss_pred             CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH----HHhcCc
Q 019298           71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHI  146 (343)
Q Consensus        71 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g~  146 (343)
                      ..|+. .+..+|+++++++++.      . +.|++++| ++++..+++ ++++||+|+++.|+|++....    ++..|.
T Consensus        62 ~r~~~-p~~~~l~~~la~~~g~------~-~~i~~~sG-~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~  131 (403)
T 3cog_A           62 SRSGN-PTRNCLEKAVAALDGA------K-YCLAFASG-LAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGL  131 (403)
T ss_dssp             ----C-HHHHHHHHHHHHHHTC------S-EEEEESCH-HHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTC
T ss_pred             cCCCC-chHHHHHHHHHHHhCC------C-cEEEECCH-HHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCC
Confidence            34544 4668999999999942      2 55666655 699999998 889999999999999875443    356788


Q ss_pred             eeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcC-cEEEEccCCCccccCCCCC
Q 019298          147 EVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLK-TLVIADEVYGHLVFGDKPF  225 (343)
Q Consensus       147 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~-~~~i~D~ay~~~~~~~~~~  225 (343)
                      +++.++.+       |++++++++++++++|++++|+||||.+++   +++|+++|+++| +++|+|++|..+.+..   
T Consensus       132 ~v~~v~~~-------d~~~l~~~i~~~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~~---  198 (403)
T 3cog_A          132 KISFVDCS-------KIKLLEAAITPETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQR---  198 (403)
T ss_dssp             EEEEECTT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTCC---
T ss_pred             EEEEECCC-------CHHHHHHhcCcCCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccccCC---
Confidence            98888653       789999999888999999999999999986   788899999999 9999999999865431   


Q ss_pred             CcccccCCCCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccch
Q 019298          226 VPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLS  299 (343)
Q Consensus       226 ~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~  299 (343)
                       ++.    .+.+++++|+||.|+++| .|+||+++++       ++++++++..... ....+++.+.++ ...+.
T Consensus       199 -~~~----~~~div~~S~sK~~~g~~~~~~G~v~~~~-------~~l~~~l~~~~~~~g~~~~~~~~~~~-~~~l~  261 (403)
T 3cog_A          199 -PLA----LGADISMYSATKYMNGHSDVVMGLVSVNC-------ESLHNRLRFLQNSLGAVPSPIDCYLC-NRGLK  261 (403)
T ss_dssp             -TTT----TTCSEEEEETTTTTTCSSCCCCEEEEECC-------HHHHHHHHHHHHHHCCCCCHHHHHHH-HHHHT
T ss_pred             -ccc----cCCeEEEEcChhhccCCCCCeEEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHH-Hhhhh
Confidence             111    245699999999999876 4799999853       4677888766432 345677777666 33443

>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*

Probab=99.93  E-value=3.2e-24  Score=197.43  Aligned_cols=257  Identities=16%  Similarity=0.152  Sum_probs=180.6

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA-PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      -.++++|+.+.|.      .++.+.+++.+.+...   .|. +..+..++|++++++++        .+++++++|++++
T Consensus        21 ~~~~~~l~~~~p~------~~~~~~~a~~~~~~~~---~~~~~~~~~~~l~~~la~~~~--------~~~~i~~~~gt~a   83 (391)
T 3dr4_A           21 MSDLPRISVAAPR------LDGNERDYVLECMDTT---WISSVGRFIVEFEKAFADYCG--------VKHAIACNNGTTA   83 (391)
T ss_dssp             -------CCCCCC------CCSSHHHHHHHHHHHT---CCSSCSHHHHHHHHHHHHHHT--------CSEEEEESSHHHH
T ss_pred             cCCCceeccCCCC------CCHHHHHHHHHHHHcC---CccCCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHH
Confidence            4567888888853      3477888888877653   455 56788999999999993        3488899999999


Q ss_pred             HHHHHHHh-cCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccC
Q 019298          113 IDVAMALL-SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYS  191 (343)
Q Consensus       113 l~~~~~~l-~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~  191 (343)
                      +..++.++ .++||+|+++.|+|..+...++..|.+++.+++++ +++.+|++++++.+++++++++   ++||||... 
T Consensus        84 l~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~---~~n~tG~~~-  158 (391)
T 3dr4_A           84 LHLALVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDP-RTFNLDAAKLEALITPRTKAIM---PVHLYGQIC-  158 (391)
T ss_dssp             HHHHHHHHTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCGGGSGGGCCTTEEEEC---CBCGGGCCC-
T ss_pred             HHHHHHHcCCCCcCEEEECCCchHHHHHHHHHCCCEEEEEecCc-cccCcCHHHHHHhcCCCceEEE---EECCCCChh-
Confidence            99999999 89999999999999999999999999999998865 3578999999999987777766   678999984 


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccCCCccc-cCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchH
Q 019298          192 YQHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK  270 (343)
Q Consensus       192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~-~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~  270 (343)
                        ++++|.++|+++|+++|+|++|+... +.+..   ...+.    .+.+.||||..+++|.+.|++++++       ++
T Consensus       159 --~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~---~~~~~----di~~~S~s~~K~l~~g~gg~~~~~~-------~~  222 (391)
T 3dr4_A          159 --DMDPILEVARRHNLLVIEDAAEAVGATYRGKK---SGSLG----DCATFSFFGNAIITTGEGGMITTND-------DD  222 (391)
T ss_dssp             --CHHHHHHHHHHTTCEEEEECTTCTTCEETTEE---TTSSS----SEEEEECBTTSSSCCBSCEEEEESC-------HH
T ss_pred             --hHHHHHHHHHHcCCEEEEECcccccceECCee---ecccC----CEEEEECCCCCcCCcCCeEEEEECC-------HH
Confidence              47778889999999999999998632 22221   11111    1778887744344556789988854       45


Q ss_pred             HHHHHhhhhccc---------------cCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298          271 VVERMKKYFDIL---------------GDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKS  333 (343)
Q Consensus       271 ~~~~l~~~~~~~---------------~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~  333 (343)
                      +.++++......               ...+....++. ...+   ..+-+..++.+++++.+.+.|.++ |+.+..+
T Consensus       223 ~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~-~~~~---~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~  295 (391)
T 3dr4_A          223 LAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIG-LAQL---ERVDEHLAARERVVGWYEQKLARL-GNRVTKP  295 (391)
T ss_dssp             HHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHH-HHHH---HTHHHHHHHHHHHHHHHHHHHGGG-TTSEECC
T ss_pred             HHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHhhcC-CccccCc
Confidence            776666553211               12233322222 1111   222336677777788888888887 7775443

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A

Probab=99.93  E-value=1.2e-24  Score=202.99  Aligned_cols=274  Identities=16%  Similarity=0.152  Sum_probs=175.0

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF--NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  110 (343)
                      ++.++||+.|...  ..++ .+|.+.+++.+++.....  ..|+ .....++++.+++++        ..++|++++|++
T Consensus        64 G~~ylD~~~g~~~--~~lgh~~p~v~~ai~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~--------g~~~v~~~~sGs  132 (433)
T 1z7d_A           64 DKRYYDFLSAYSS--VNQGHCHPNILNAMINQAKNLTICSRAFF-SVPLGICERYLTNLL--------GYDKVLMMNTGA  132 (433)
T ss_dssp             CCEEEESSHHHHT--TTTCBTCHHHHHHHHHHHTTCSCCCTTSE-EHHHHHHHHHHHHHH--------TCSEEEEESSHH
T ss_pred             CCEEEEcccchhh--cccCCCCHHHHHHHHHHHHhCCCccCCcC-CHHHHHHHHHHHhhc--------CCCeEEEeCCHH
Confidence            5678899887533  3466 889999999999875321  1221 122345666666655        368999999999


Q ss_pred             HHHHHHHHHhc---------CCC-CeEEEeCCCCcchHHH-HHhcC------------ceeEEeecCCCCCCCCCHHHHH
Q 019298          111 QAIDVAMALLS---------RPG-ANILLPRPGFPIYELS-AAFRH------------IEVRHFDLLPDKGWEVDLDDIE  167 (343)
Q Consensus       111 ~al~~~~~~l~---------~~g-d~vl~~~p~~~~~~~~-~~~~g------------~~~~~~~~~~~~~~~~d~~~l~  167 (343)
                      +++..+++.+.         .+| +.|++.+|+|+++... ....|            .++..++.       .|+++|+
T Consensus       133 eA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le  205 (433)
T 1z7d_A          133 EANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-------DDLEALE  205 (433)
T ss_dssp             HHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-------TCHHHHH
T ss_pred             HHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-------CCHHHHH
Confidence            99999998753         367 9999999999876442 23223            12333332       2799999


Q ss_pred             hhh-cCCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCc
Q 019298          168 SLA-DQNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS  244 (343)
Q Consensus       168 ~~~-~~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~s  244 (343)
                      +++ ++++++ ++++| +|++|.+ ++.+++++|.++|++||+++|+||+|.++.+.+.. ..+..++...+++   |+|
T Consensus       206 ~~l~~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~-~~~~~~~~~~di~---t~s  280 (433)
T 1z7d_A          206 EELKDPNVCA-FIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKL-LCVHHYNVKPDVI---LLG  280 (433)
T ss_dssp             HHHTSTTEEE-EEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSEE---EEC
T ss_pred             HHhCCCCEEE-EEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcc-hhhHhcCCCCCEE---EEC
Confidence            998 455555 45556 6779975 68889999999999999999999999876554432 1112222222332   899


Q ss_pred             cccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhh
Q 019298          245 KRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSY  322 (343)
Q Consensus       245 K~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L  322 (343)
                      |.++ +| +|+||+++++        ++++.+... ...+++.++++++++ .++|+...+ .+..++++++++.+.+.|
T Consensus       281 K~l~-~G~~~~G~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aaa-~aal~~~~~-~~~~~~~~~~~~~l~~~L  349 (433)
T 1z7d_A          281 KALS-GGHYPISAVLAND--------DIMLVIKPGEHGSTYGGNPLAASIC-VEALNVLIN-EKLCENAEKLGGPFLENL  349 (433)
T ss_dssp             GGGG-TTSSCCEEEEECH--------HHHTTCCTTCCCCTTTTCHHHHHHH-HHHHHHHHH-TTHHHHHHHHHHHHHHHH
T ss_pred             cccc-CCCCCeEEEEECH--------HHHhhhccccccccCCCCHHHHHHH-HHHHHHHHh-ccHHHHHHHHHHHHHHHH
Confidence            9988 79 9999999853        566665543 223456788877777 455442211 125667777777777777


Q ss_pred             cCC----CCceeeCCCCceEeeec
Q 019298          323 KLI----PELINFKSTGSSLKYLD  342 (343)
Q Consensus       323 ~~~----~g~~~~~~~~g~~~~~~  342 (343)
                      +++    |.+.. .+..|+++|++
T Consensus       350 ~~l~~~~~~~~~-~~~~g~~~~i~  372 (433)
T 1z7d_A          350 KRELKDSKIVRD-VRGKGLLCAIE  372 (433)
T ss_dssp             HHHHTTCTTEEE-EEEETTEEEEE
T ss_pred             HHHHHhCCCeEE-EEeeeeEEEEE
Confidence            643    32222 22346677765

>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*

Probab=99.93  E-value=1.3e-24  Score=198.53  Aligned_cols=239  Identities=15%  Similarity=0.143  Sum_probs=178.9

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeC
Q 019298           53 TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPR  131 (343)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~  131 (343)
                      .++++.+++.+.+...   .|.+..+..++|+.++++++        .+++++++|+++++..+++++ .++||+|+++.
T Consensus        14 ~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~   82 (367)
T 3nyt_A           14 IKDKIDAGIQRVLRHG---QYILGPEVTELEDRLADFVG--------AKYCISCANGTDALQIVQMALGVGPGDEVITPG   82 (367)
T ss_dssp             HHHHHHHHHHHHHHHC---CCSSCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEES
T ss_pred             cCHHHHHHHHHHHhcC---CccCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHhCCCCcCEEEECC
Confidence            4678888888877653   45566678999999999993        348999999999999999999 88999999999


Q ss_pred             CCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEE
Q 019298          132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA  211 (343)
Q Consensus       132 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~  211 (343)
                      |+|..+...+...|.+++.++++++ ++.+|++++++++++++++|+   |+||||..   .++++|.++|+++|+++|+
T Consensus        83 ~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~---~~~~~i~~la~~~~~~li~  155 (367)
T 3nyt_A           83 FTYVATAETVALLGAKPVYVDIDPR-TYNLDPQLLEAAITPRTKAII---PVSLYGQC---ADFDAINAIASKYGIPVIE  155 (367)
T ss_dssp             SSCTHHHHHHHHTTCEEEEECBCTT-TCSBCGGGTGGGCCTTEEEEC---CBCGGGCC---CCHHHHHHHHHHTTCCBEE
T ss_pred             CccHHHHHHHHHcCCEEEEEecCCc-cCCcCHHHHHHhcCcCCcEEE---eeCCccCh---hhHHHHHHHHHHcCCEEEE
Confidence            9999999999999999999988653 478999999999987777766   88999987   4578888889999999999


Q ss_pred             ccCCCcc-ccCCCCCCcccccCCCCCEEEEccC--ccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-------
Q 019298          212 DEVYGHL-VFGDKPFVPMGVFGSTVPILTLGSL--SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-------  281 (343)
Q Consensus       212 D~ay~~~-~~~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-------  281 (343)
                      |++|+.. .+.+.....   +.    .+++.||  +|.++..|. .|++++++       +++.++++.....       
T Consensus       156 D~a~~~g~~~~~~~~~~---~~----di~~~Sf~~~K~l~~~g~-gg~~~~~~-------~~l~~~~~~~~~~g~~~~~~  220 (367)
T 3nyt_A          156 DAAQSFGASYKGKRSCN---LS----TVACTSFFPSAPLGCYGD-GGAIFTND-------DELATAIRQIARHGQDRRYH  220 (367)
T ss_dssp             ECTTTTTCEETTEETTS---SS----SEEEEECCTTSSSCCSSC-CEEEEESC-------HHHHHHHHHHTBTTEEETTE
T ss_pred             ECccccCCeECCeeccC---CC----CEEEEECCCCCcCCCcCc-eeEEEeCC-------HHHHHHHHHHHhcCCCcCce
Confidence            9999853 333322211   22    3888897  899887676 88888853       4677777665331       


Q ss_pred             ------ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce
Q 019298          282 ------LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI  329 (343)
Q Consensus       282 ------~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~  329 (343)
                            ....++...+++ ...+..   +-+..++.+++++.+.+.|.++ ++.
T Consensus       221 ~~~~g~~~~~~~~~aa~~-~~~l~~---~~~~~~~~~~~~~~~~~~L~~~-~~~  269 (367)
T 3nyt_A          221 HIRVGVNSRLDTLQAAIL-LPKLEI---FEEEIALRQKVAAEYDLSLKQV-GIG  269 (367)
T ss_dssp             ECSCCCBCCCCHHHHHHH-HHHHHT---HHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred             eeccCcCCCccHHHHHHH-HHHHHH---HHHHHHHHHHHHHHHHHHhccC-Cee
Confidence                  234455555444 333322   2224555666667777777776 444

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*

Probab=99.93  E-value=1.5e-25  Score=203.74  Aligned_cols=270  Identities=13%  Similarity=0.074  Sum_probs=179.2

Q ss_pred             ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC---CCCCCCC---CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSE---KFNGYAP---TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~Y~~---~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~  109 (343)
                      .+++++.|.      .++++.+++++.+.+.+.   ....|..   ..+..++.+.+.+++.+.+|.. ++++|++++|+
T Consensus         3 ~~~~~~~g~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~-~~~~v~~~~g~   75 (360)
T 1w23_A            3 QVFNFNAGP------SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIP-NDYQILFLQGG   75 (360)
T ss_dssp             CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCC-TTEEEEEESSH
T ss_pred             ceEeecCCC------cCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCceEEEECCc
Confidence            356777775      367899999999887531   0111211   1222233344444444433432 35799999999


Q ss_pred             -HHHHHHHHHHhcCC---CCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHh-hhcCCceEEEEeCCCC
Q 019298          110 -TQAIDVAMALLSRP---GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIES-LADQNTVALVIINPGN  184 (343)
Q Consensus       110 -~~al~~~~~~l~~~---gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~-~~~~~~~~i~~~~p~n  184 (343)
                       ++++..++..+..+   ||.|+++.++|..+ ..++..| +++.++++++++ .+|++++++ +++++++++++++|+|
T Consensus        76 gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~~-~~~~~~g-~~~~v~~~~~~~-~~d~~~l~~~~i~~~~k~v~~~~~~n  152 (360)
T 1w23_A           76 ASLQFTMLPMNLLTKGTIGNYVLTGSWSEKAL-KEAKLLG-ETHIAASTKANS-YQSIPDFSEFQLNENDAYLHITSNNT  152 (360)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEEECSHHHHHHH-HHHHTTS-EEEEEEECGGGT-SCSCCCGGGCCCCTTEEEEEEESEET
T ss_pred             chHHHHHHHHHhcCCCCcccEEEecchhHHHH-HHHHHhC-CeEEeecccccC-cCCccchHhhccCCCCCEEEEeCCCC
Confidence             99999999998865   56677777666543 3456779 999998865333 378899988 8887899999999999


Q ss_pred             CcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCC
Q 019298          185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG  264 (343)
Q Consensus       185 ptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~  264 (343)
                      |||.+++  ++      +++||+++|+|++|+.+..    +..+..+     .++++|+||.|+.+|  +||+++++   
T Consensus       153 ptG~~~~--~i------~~~~~~~li~D~a~~~~~~----~~~~~~~-----di~~~s~sK~~~~~G--~G~~~~~~---  210 (360)
T 1w23_A          153 IYGTQYQ--NF------PEINHAPLIADMSSDILSR----PLKVNQF-----GMIYAGAQKNLGPSG--VTVVIVKK---  210 (360)
T ss_dssp             TTTEECS--SC------CCCCSSCEEEECTTTTTSS----CCCGGGC-----SEEEEETTTTTSCTT--CEEEEEEH---
T ss_pred             Ccceecc--cc------cccCCceEEEechhhcCCC----CcCcccC-----CEEEEEcccccCCCC--cEEEEEcH---
Confidence            9999987  22      3389999999999987532    1122222     288999999998776  89999863   


Q ss_pred             CCCchHHHHHHhhhh-------------ccccCcchHHHHHHHhccchhhHH--HHH-HHHHHHHHHHHHHHhhcCCCCc
Q 019298          265 MFRKPKVVERMKKYF-------------DILGDPATFIQVCIMYGCLSTIMQ--IMI-HGNFLENFAGSCVPSYKLIPEL  328 (343)
Q Consensus       265 ~~~~~~~~~~l~~~~-------------~~~~~~~~~~~~a~~~~~l~~~~~--~l~-~~~~~~~~~~~~~~~L~~~~g~  328 (343)
                           +++++++...             .....++...+.++ ..++.....  .++ .+++++++++.+.+.|++++++
T Consensus       211 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  284 (360)
T 1w23_A          211 -----DLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYML-RNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGF  284 (360)
T ss_dssp             -----HHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHH-HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTS
T ss_pred             -----HHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHH-HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCc
Confidence                 4554443321             11134455555555 444443222  333 7888999999999999988665


Q ss_pred             -eee-CC--CCceEeeecC
Q 019298          329 -INF-KS--TGSSLKYLDL  343 (343)
Q Consensus       329 -~~~-~~--~~g~~~~~~l  343 (343)
                       ... .+  .+++++|+++
T Consensus       285 ~~~~~~~~~~~~~~~~~~~  303 (360)
T 1w23_A          285 YVGHAEKGSRSLMNVTFNL  303 (360)
T ss_dssp             SEESSCGGGBCSSEEEEEC
T ss_pred             ccccCCchhccCcEEEEEc
Confidence             432 23  3466888764

>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*

Probab=99.93  E-value=8.8e-24  Score=193.12  Aligned_cols=244  Identities=16%  Similarity=0.066  Sum_probs=180.6

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh---cCCCCeEE
Q 019298           52 HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL---SRPGANIL  128 (343)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l---~~~gd~vl  128 (343)
                      ++++.+.+++.+++...   .|.+.....++|+.++++++        .+++++++|+++++..+++++   .++||+|+
T Consensus        10 ~~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl   78 (375)
T 2fnu_A           10 CLDKEDKKAVLEVLNSK---QLTQGKRSLLFEEALCEFLG--------VKHALVFNSATSALLTLYRNFSEFSADRNEII   78 (375)
T ss_dssp             CCCHHHHHHHHHHHTSS---CCSSSHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHSSCCCTTSCEEE
T ss_pred             CCCHHHHHHHHHHHHcC---cccCChHHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHhcccCCCCCEEE
Confidence            46789999999988653   23344567899999999993        239999999999999999999   88999999


Q ss_pred             EeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcE
Q 019298          129 LPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTL  208 (343)
Q Consensus       129 ~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~  208 (343)
                      ++.|+|..+...+...|.+++.++++++  ..+|++++++.++++++++++++|   ||.+.+   +++|.++|+++|++
T Consensus        79 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~---l~~i~~l~~~~~~~  150 (375)
T 2fnu_A           79 TTPISFVATANMLLESGYTPVFAGIKND--GNIDELALEKLINERTKAIVSVDY---AGKSVE---VESVQKLCKKHSLS  150 (375)
T ss_dssp             ECSSSCTHHHHHHHHTTCEEEECCBCTT--SSBCGGGSGGGCCTTEEEEEEECG---GGCCCC---HHHHHHHHHHHTCE
T ss_pred             ECCCccHhHHHHHHHCCCEEEEeccCCC--CCCCHHHHHhhcCcCceEEEEeCC---cCCccC---HHHHHHHHHHcCCE
Confidence            9999999999999999999999988653  368999999998888888887776   999965   67888889999999


Q ss_pred             EEEccCCCccccCCCCCCcccccCCCCCEEEEccCc--cccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccc----
Q 019298          209 VIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDIL----  282 (343)
Q Consensus       209 ~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~----  282 (343)
                      +|+|++|+.+.....  ..   +...+ .+++.|+|  |.++. |  +|++++.+      +++++++++......    
T Consensus       151 li~D~a~~~~~~~~~--~~---~~~~~-~i~~~s~s~~K~~~~-g--~g~~~~~~------~~~~~~~~~~~~~~~~~~~  215 (375)
T 2fnu_A          151 FLSDSSHALGSEYQN--KK---VGGFA-LASVFSFHAIKPITT-A--EGGAVVTN------DSELHEKMKLFRSHGMLKK  215 (375)
T ss_dssp             EEEECTTCTTCEETT--EE---TTSSS-SEEEEECCTTSSSCC-S--SCEEEEES------CHHHHHHHHHHTBTTEEES
T ss_pred             EEEECccccCCeECC--ee---ccccC-CeEEEeCCCCCCccc-c--CceEEEeC------CHHHHHHHHHHHhcCCccc
Confidence            999999987542211  11   12111 37888888  99865 6  78887742      245777776553211    


Q ss_pred             -------------cCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298          283 -------------GDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKS  333 (343)
Q Consensus       283 -------------~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~  333 (343)
                                   ...++...++. ...+   ..+-+..++++++++.+.+.|+++||+.+..+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~a~~-~~~~---~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~  275 (375)
T 2fnu_A          216 DFFEGEVKSIGHNFRLNEIQSALG-LSQL---KKAPFLMQKREEAALTYDRIFKDNPYFTPLHP  275 (375)
T ss_dssp             SSSCEEESSCCCBCCCCHHHHHHH-HHHH---TTHHHHHHHHHHHHHHHHHHHTTCSSEEESGG
T ss_pred             cccccccccccccCCCCHHHHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHhhcCCCccccCC
Confidence                         12233333222 1111   22233778888899999999999888886444

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}

Probab=99.93  E-value=1.2e-24  Score=202.53  Aligned_cols=277  Identities=15%  Similarity=0.075  Sum_probs=182.2

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      ++.++||+.|......++ .+|.+.+++.++++......|     ..++++.+++.+.+.++   .+++|++++|+++++
T Consensus        51 g~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~ea~  121 (424)
T 2e7u_A           51 GNRYLDYVMSWGPLILGH-AHPKVLARVRETLERGLTFGA-----PSPLEVALAKKVKRAYP---FVDLVRFVNSGTEAT  121 (424)
T ss_dssp             CCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHTCSCCSS-----CCHHHHHHHHHHHHHCT---TCCEEEEESSHHHHH
T ss_pred             CCEEEEccccccccccCC-CCHHHHHHHHHHHHhCCCCCC-----CCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHHH
Confidence            677899998874422223 689999999999876422223     34566666666665543   578999999999999


Q ss_pred             HHHHHH---hcCCCCeEEEeCCCCcchHHHHHh--------------cCc------eeEEeecCCCCCCCCCHHHHHhhh
Q 019298          114 DVAMAL---LSRPGANILLPRPGFPIYELSAAF--------------RHI------EVRHFDLLPDKGWEVDLDDIESLA  170 (343)
Q Consensus       114 ~~~~~~---l~~~gd~vl~~~p~~~~~~~~~~~--------------~g~------~~~~~~~~~~~~~~~d~~~l~~~~  170 (343)
                      ..+++.   +.+ ++.|++.+|+|+++...+..              .|.      ++..++.       .|+++|++.+
T Consensus       122 ~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l  193 (424)
T 2e7u_A          122 MSALRLARGYTG-RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLREVL  193 (424)
T ss_dssp             HHHHHHHHHHHC-CCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHHHH
T ss_pred             HHHHHHHHHhhC-CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHHHH
Confidence            999986   554 47899999999876543221              121      1222321       3789999888


Q ss_pred             cC--CceEEEEeCCCCC-ccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccc
Q 019298          171 DQ--NTVALVIINPGNP-CGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKR  246 (343)
Q Consensus       171 ~~--~~~~i~~~~p~np-tG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~  246 (343)
                      ++  +..++++++|+|+ ||.+. +.+.+++|.++ ++||+++|+||+|.++ ..+.. .....++...++   .||||+
T Consensus       194 ~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~di---~s~sK~  267 (424)
T 2e7u_A          194 KRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFG-GATELLGLKPDL---VTLGKI  267 (424)
T ss_dssp             HHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTT-HHHHHHTCCCSE---EEECGG
T ss_pred             HhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchh-HHHHHhCCCcch---hhhhhh
Confidence            63  3456677788654 89765 79999999999 9999999999999987 33321 111112222232   389999


Q ss_pred             cCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh----hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhh
Q 019298          247 WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSY  322 (343)
Q Consensus       247 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L  322 (343)
                      |+. |+|+||+++++        ++++.++..    ...+++.++++++++ .++|+...+.-+..++++++++.+.+.|
T Consensus       268 l~~-G~~~G~~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~aaa-~aal~~~~~~~~~~~~~~~~~~~l~~~L  337 (424)
T 2e7u_A          268 LGG-GLPAAAYAGRR--------EIMEKVAPLGPVYQAGTLSGNPLAMAAG-LATLELLEENPGYYAYLEDLGARLEAGL  337 (424)
T ss_dssp             GGT-TSSCEEEEECH--------HHHTTBTTTSSBCCCCTTCSCHHHHHHH-HHHHHHHHHCTHHHHHHHHHHHHHHHHH
T ss_pred             hhC-CcceEEEEEcH--------HHHhhhcccCCcccCCCCCCCHHHHHHH-HHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence            985 99999999853        677766542    122456788888777 5555432221225667777777777777


Q ss_pred             cCC---CCceeeCCCCceEeeecC
Q 019298          323 KLI---PELINFKSTGSSLKYLDL  343 (343)
Q Consensus       323 ~~~---~g~~~~~~~~g~~~~~~l  343 (343)
                      +++   .++....+..|.|+|+++
T Consensus       338 ~~~~~~~~~~~~~~~~g~~~~i~~  361 (424)
T 2e7u_A          338 KEVLKEKGLPHTVNRVGSMITVFF  361 (424)
T ss_dssp             HHHHHHTTCCCEEEEETTEEEEES
T ss_pred             HHHHHhCCCceEEEeeceEEEEEE
Confidence            653   133321233466788764

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}

Probab=99.92  E-value=6.2e-24  Score=197.22  Aligned_cols=228  Identities=14%  Similarity=0.048  Sum_probs=163.4

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH----HHHhcCceeEEee
Q 019298           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFD  152 (343)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~  152 (343)
                      +...+|++.++++++        .+..++++++++++..++++++++||+|++++|+|..+..    .+...|.+++.++
T Consensus        82 p~~~~le~~lA~l~g--------~~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~  153 (430)
T 3ri6_A           82 PTVEDLEQRLKNLTG--------ALGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVD  153 (430)
T ss_dssp             HHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEEC
T ss_pred             HHHHHHHHHHHHHHC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeC
Confidence            456789999999883        3456677777899999999999999999999999988777    5677899998887


Q ss_pred             cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (343)
Q Consensus       153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~  232 (343)
                      .+       |++++++++++++++|++++|+||||.+++   +++|+++|+++|+++|+|++|+...+..    + .   
T Consensus       154 ~~-------d~~~l~~ai~~~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~~~----~-~---  215 (430)
T 3ri6_A          154 VM-------DSLAVEHACDETTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYLLE----A-K---  215 (430)
T ss_dssp             TT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTTCC----G-G---
T ss_pred             CC-------CHHHHHHhhCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccCC----h-H---
Confidence            53       799999999989999999999999999975   6788888999999999999998644311    1 1   


Q ss_pred             CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCC----c---------hHHHHHHhhh--hccccCcchHHHHHHHhcc
Q 019298          233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR----K---------PKVVERMKKY--FDILGDPATFIQVCIMYGC  297 (343)
Q Consensus       233 ~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~----~---------~~~~~~l~~~--~~~~~~~~~~~~~a~~~~~  297 (343)
                      ..+..+++.|+||.++.+|..+|.+++.+....+.    .         ..++.+++..  .......++.....+    
T Consensus       216 ~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~----  291 (430)
T 3ri6_A          216 RLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQ----  291 (430)
T ss_dssp             GGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHH----
T ss_pred             HcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHH----
Confidence            11234999999999998887777766633221110    0         1223333322  122233444443333    


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCCC
Q 019298          298 LSTIMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKST  334 (343)
Q Consensus       298 l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~~  334 (343)
                      +.....+..+.++..++...+.+.|+++|++. +..|.
T Consensus       292 l~~l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~  329 (430)
T 3ri6_A          292 SLGLETMALRIERSCQNAQELAHWLLSIPQVKCVNHPS  329 (430)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTT
T ss_pred             HhhhhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCC
Confidence            11112222366777888999999999998887 66665

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*

Probab=99.92  E-value=1.1e-23  Score=193.81  Aligned_cols=212  Identities=14%  Similarity=0.073  Sum_probs=158.8

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH----HHhcCceeEEee
Q 019298           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFD  152 (343)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~  152 (343)
                      ....++++.++++++        .+++++++++++++..+++++.++||+|+++.|+|+++...    ++..|.+++.++
T Consensus        59 ~~~~~l~~~la~~~g--------~~~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~  130 (389)
T 3acz_A           59 PTVEQFEEMVCSIEG--------AAGSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLID  130 (389)
T ss_dssp             HHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred             hHHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEEC
Confidence            345689999999983        23677777788999999999899999999999999986655    577899998886


Q ss_pred             cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (343)
Q Consensus       153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~  232 (343)
                      .       .|+++++++++++++++++++|+||||.+++   +++|.++|+++|+++|+|++|..+.+..    ++.   
T Consensus       131 ~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~~----~~~---  193 (389)
T 3acz_A          131 T-------SDVEKVKAAWKPNTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFLK----PLE---  193 (389)
T ss_dssp             T-------TCHHHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTCC----GGG---
T ss_pred             C-------CCHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccccC----ccc---
Confidence            5       3799999999888999999999999999976   7888889999999999999999765321    121   


Q ss_pred             CCCCEEEEccCccccCCCCCcE-EEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHHHHHH
Q 019298          233 STVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMIHGNF  310 (343)
Q Consensus       233 ~~~~~i~~~S~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~  310 (343)
                       .+.+++++|+||.++++|.|+ ||+++++       ++++++++.... .....++..+.++ ...|..   +....++
T Consensus       194 -~~~di~~~S~sK~~~~~~~~~~G~v~~~~-------~~~~~~l~~~~~~~g~~~~~~~~~~~-~~~l~~---l~~r~~~  261 (389)
T 3acz_A          194 -LGADIALHSVSKYINGHGDVIGGVSSAKT-------AEDIATIKFYRKDAGSLMAPMDAFLC-ARGMKT---LPIRMQI  261 (389)
T ss_dssp             -TTCSEEEEETTTTTTCSSCCCCEEEEESS-------HHHHHHHHHHHHHHCCCCCHHHHHHH-HHHHTT---HHHHHHH
T ss_pred             -cCCeEEEECChhhccCCCCceeEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHH-HcCccH---HHHHHHH
Confidence             235699999999999999998 9998852       257777776543 2344566665555 333332   1123344


Q ss_pred             HHHHHHHHHHhhcCC
Q 019298          311 LENFAGSCVPSYKLI  325 (343)
Q Consensus       311 ~~~~~~~~~~~L~~~  325 (343)
                      ..++...+.+.|+++
T Consensus       262 ~~~~~~~l~~~l~~~  276 (389)
T 3acz_A          262 HMENGLKVAKFLEQH  276 (389)
T ss_dssp             HHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHcC
Confidence            455555555555544

>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.92  E-value=1.3e-23  Score=193.19  Aligned_cols=216  Identities=17%  Similarity=0.189  Sum_probs=163.2

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH----HHhcCceeEEee
Q 019298           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFD  152 (343)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~  152 (343)
                      .+..++++.+++++.      .+ +.|++++| ++++..+++.+.++||+|+++.|+|.+....    ++..|.++..++
T Consensus        52 ~~~~~l~~~la~~~~------~~-~~i~~~sG-t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~  123 (386)
T 1cs1_A           52 PTRDVVQRALAELEG------GA-GAVLTNTG-MSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD  123 (386)
T ss_dssp             HHHHHHHHHHHHHHT------CS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEEC
T ss_pred             ccHHHHHHHHHHHhC------CC-cEEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeC
Confidence            456899999999994      22 56666555 9999999999999999999999999874443    466788888876


Q ss_pred             cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (343)
Q Consensus       153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~  232 (343)
                      ..       |++++++.++++++++++++|+||||.+++   +++|.++|+++|+++|+|++|..+.+..    +.    
T Consensus       124 ~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~----~~----  185 (386)
T 1cs1_A          124 QG-------DEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQN----PL----  185 (386)
T ss_dssp             TT-------CHHHHHHHHHTCCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC----GG----
T ss_pred             CC-------CHHHHHHhhccCCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC----cc----
Confidence            52       789999999888999999999999999975   7888888999999999999999876431    11    


Q ss_pred             CCCCEEEEccCccccCCCCCcE-EEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHHHHHH
Q 019298          233 STVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGNF  310 (343)
Q Consensus       233 ~~~~~i~~~S~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~  310 (343)
                      ..+.++++.|+||.|+++|.|+ ||+++++       ++++++++..... ....++..+.++ ...+.   .+.+..+.
T Consensus       186 ~~~~di~~~s~sK~~~~~~~~~~G~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~~~~-~~~l~---~~~~~~~~  254 (386)
T 1cs1_A          186 ALGADLVLHSCTKYLNGHSDVVAGVVIAKD-------PDVVTELAWWANNIGVTGGAFDSYLL-LRGLR---TLVPRMEL  254 (386)
T ss_dssp             GGTCSEEEEETTTTTTCSSCCCCEEEEESS-------HHHHHHHHHHHHHHTCBCCHHHHHHH-HHHHT---THHHHHHH
T ss_pred             ccCceEEEEcCcccccCCCCceeEEEEeCc-------HHHHHHHHHHHHhcCCCCCHHHHHHH-Hhccc---HHHHHHHH
Confidence            1245699999999999999997 9999853       3577777765432 334566666655 22222   12225666


Q ss_pred             HHHHHHHHHHhhcCCCCce
Q 019298          311 LENFAGSCVPSYKLIPELI  329 (343)
Q Consensus       311 ~~~~~~~~~~~L~~~~g~~  329 (343)
                      +.++++.+.+.|++++++.
T Consensus       255 ~~~~~~~l~~~l~~~~~l~  273 (386)
T 1cs1_A          255 AQRNAQAIVKYLQTQPLVK  273 (386)
T ss_dssp             HHHHHHHHHHHHTTCTTEE
T ss_pred             HHHHHHHHHHHHhcCCCeE
Confidence            7777888888877765543

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A

Probab=99.92  E-value=1.6e-24  Score=203.23  Aligned_cols=288  Identities=12%  Similarity=0.010  Sum_probs=184.4

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      ++.++||+.+...  ..++ .+|.+.+++.+++...  ..|....+..+.+.++++.+.+..+. ...++|++++|++++
T Consensus        60 g~~ylD~~~~~~~--~~lGh~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~-~~~~~v~~~~sGseA  134 (451)
T 3oks_A           60 GNRLIDLGSGIAV--TTVGNSAPKVVEAVRSQVGDF--THTCFMVTPYEGYVAVCEQLNRLTPV-RGDKRSALFNSGSEA  134 (451)
T ss_dssp             SCEEEESSHHHHT--CTTCTTCHHHHHHHHHHHTTC--SCCTTTTSCCHHHHHHHHHHHHHSSC-CSSEEEEEESSHHHH
T ss_pred             CCEEEEcCCCccc--cccCCCCHHHHHHHHHHHHhc--ccccCCccCCHHHHHHHHHHHHhCCc-CCCCEEEEeCcHHHH
Confidence            6778999988543  2244 5899999999998754  23554445667777888877765442 135799999999999


Q ss_pred             HHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhcCc--------------eeEEeecCCC--------CCCC---CCHHH
Q 019298          113 IDVAMALLSR--PGANILLPRPGFPIYELSAAFRHI--------------EVRHFDLLPD--------KGWE---VDLDD  165 (343)
Q Consensus       113 l~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~--------~~~~---~d~~~  165 (343)
                      +..+++.+..  .+++|++.+++|+++...+...+.              .+..++....        +...   .+++.
T Consensus       135 ~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  214 (451)
T 3oks_A          135 VENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKR  214 (451)
T ss_dssp             HHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHH
Confidence            9999988753  458999999999887665544422              3344443210        0000   12344


Q ss_pred             HHhhh----cCCceEEEEeCCCCCcc-c-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEE
Q 019298          166 IESLA----DQNTVALVIINPGNPCG-N-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT  239 (343)
Q Consensus       166 l~~~~----~~~~~~i~~~~p~nptG-~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~  239 (343)
                      +++.+    ..+..+++++.|.|++| . ..+.+.+++|.++|++||+++|+||+|.++.+.+.. .....++...+++ 
T Consensus       215 ~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~-~~~~~~~~~pdi~-  292 (451)
T 3oks_A          215 AITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAM-FACEHEGIDPDLI-  292 (451)
T ss_dssp             HHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSEE-
T ss_pred             HHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccc-hhhhhcCCCCCee-
Confidence            43433    33566777888866555 3 356778999999999999999999999987655432 2222222222333 


Q ss_pred             EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHH
Q 019298          240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSC  318 (343)
Q Consensus       240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~  318 (343)
                        ||||+++. |+|+||++++        +++++.+.... ..+++.++++++++ .++|+.... -+..++++++.+.+
T Consensus       293 --t~sK~l~~-G~~iG~v~~~--------~~~~~~~~~~~~~~t~~~~~~~~aaa-~aal~~~~~-~~~~~~~~~~~~~l  359 (451)
T 3oks_A          293 --VTAKGIAG-GLPLSAVTGR--------AEIMDSPHVSGLGGTYGGNPIACAAA-LATIETIES-EGLVARAQQIEKIM  359 (451)
T ss_dssp             --EECGGGGT-TSSCEEEEEE--------HHHHTCSCTTSBCCSSSSCHHHHHHH-HHHHHHHHH-TTHHHHHHHHHHHH
T ss_pred             --eehhhhhC-CcceEEEEEC--------HHHHhhhcCCCcCCCCCCCHHHHHHH-HHHHHHHhh-hhHHHHHHHHHHHH
Confidence              88999876 9999999985        36777666543 33667889988888 555542111 01444455555555


Q ss_pred             HHhhc----CCCCceeeCCCCceEeeec
Q 019298          319 VPSYK----LIPELINFKSTGSSLKYLD  342 (343)
Q Consensus       319 ~~~L~----~~~g~~~~~~~~g~~~~~~  342 (343)
                      .+.|+    .+|.+....+ .|.|+|++
T Consensus       360 ~~~L~~~~~~~~~~~~~~~-~G~~~~~~  386 (451)
T 3oks_A          360 KDRLGRLQAEDDRIGDVRG-RGAMIAME  386 (451)
T ss_dssp             HHHHHHHHHHCTTEEEEEE-ETTEEEEE
T ss_pred             HHHHHHHHhhCCCeEEEEE-eeEEEEEE
Confidence            44443    4554443233 35566654

>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3

Probab=99.92  E-value=2.8e-24  Score=199.26  Aligned_cols=268  Identities=13%  Similarity=0.048  Sum_probs=181.8

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-----C---CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA-----P---TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT  106 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-----~---~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~  106 (343)
                      ++.+.|+.+.+     .+.++.+.+++.+++... ...+.     +   .....++++.+++++      ++++++|++|
T Consensus        27 ~~~~yld~~~~-----~~~~~~v~~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~   94 (416)
T 1qz9_A           27 EGVIYLDGNSL-----GARPVAALARAQAVIAEE-WGNGLIRSWNSAGWRDLSERLGNRLATLI------GARDGEVVVT   94 (416)
T ss_dssp             TTCEECCTTTS-----CCCBTTHHHHHHHHHHTC-CCCCGGGHHHHTSGGGHHHHHHHHHHTTT------TCCTTSEEEC
T ss_pred             CCeEeecCCCc-----CCCcHHHHHHHHHHHHHH-HhccCccccchhhHHHHHHHHHHHHHHHc------CCCcccEEEe
Confidence            45788888763     256788899999988642 11111     0   123356667776665      3467899999


Q ss_pred             cChHHHHHHHHHHhc------CCCCe-EEEeCCCCcchHHH----HHhc--CceeEEeecCCCCCCCCCHHHHHhhhcCC
Q 019298          107 SGCTQAIDVAMALLS------RPGAN-ILLPRPGFPIYELS----AAFR--HIEVRHFDLLPDKGWEVDLDDIESLADQN  173 (343)
Q Consensus       107 ~g~~~al~~~~~~l~------~~gd~-vl~~~p~~~~~~~~----~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~~~~~  173 (343)
                      +|+++++..+++++.      ++||+ |++..++|+.+...    ++..  |.+++.++.         +++|+++++++
T Consensus        95 ~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~~~l~~~i~~~  165 (416)
T 1qz9_A           95 DTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS---------PEELPQAIDQD  165 (416)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS---------GGGHHHHCSTT
T ss_pred             CChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc---------HHHHHHHhCCC
Confidence            999999998888876      88986 55555677754433    2333  888887754         68888888888


Q ss_pred             ceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCc
Q 019298          174 TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWR  253 (343)
Q Consensus       174 ~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r  253 (343)
                      ++++++++|+||||.+++   +++|.++|+++|+++|+|++|+...    ....+..+   +..+++.|++|.+ .+|.+
T Consensus       166 ~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~----~~~~~~~~---~~d~~~~s~~K~l-~~g~~  234 (416)
T 1qz9_A          166 TAVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSAGA----VPVDLHQA---GADYAIGCTYKYL-NGGPG  234 (416)
T ss_dssp             EEEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTT----SCCCHHHH---TCSEEEECSSSTT-CCCTT
T ss_pred             ceEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEccccccC----cCCChhhc---CCCEEEecCcccC-CCCCC
Confidence            899999999999999987   6888889999999999999998421    11122222   2348899999995 45777


Q ss_pred             E-EEEEEeCCCCCCCchHHHHHHhhh-----------------------hcc-ccCcchHHHHHHHhccchhhH-HHH-H
Q 019298          254 L-GWFVTTDPCGMFRKPKVVERMKKY-----------------------FDI-LGDPATFIQVCIMYGCLSTIM-QIM-I  306 (343)
Q Consensus       254 ~-G~i~~~~~~~~~~~~~~~~~l~~~-----------------------~~~-~~~~~~~~~~a~~~~~l~~~~-~~l-~  306 (343)
                      + |+++++++        ++++++..                       ... .+.++...+.++ .+++.... +.+ +
T Consensus       235 ~~g~l~~~~~--------~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~al~~~~~~~~~~  305 (416)
T 1qz9_A          235 SQAFVWVSPQ--------LCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMV-ECGLDVFAQTDMAS  305 (416)
T ss_dssp             CCCEEEECTT--------TTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHH-HHHHHHHTTSCHHH
T ss_pred             CeEEEEECHH--------HHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHH-HHHHHHHHhcCHHH
Confidence            7 99998653        22222221                       011 234555555554 44443321 223 3


Q ss_pred             HHHHHHHHHHHHHHhhcCC-C--CceeeCCC----CceEeeecC
Q 019298          307 HGNFLENFAGSCVPSYKLI-P--ELINFKST----GSSLKYLDL  343 (343)
Q Consensus       307 ~~~~~~~~~~~~~~~L~~~-~--g~~~~~~~----~g~~~~~~l  343 (343)
                      .+++++++++.+.+.|+++ |  |+.+..+.    .+.++|+++
T Consensus       306 ~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~  349 (416)
T 1qz9_A          306 LRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEH  349 (416)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEec
Confidence            7888899999999999875 6  78866664    356677753

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*

Probab=99.92  E-value=1.3e-24  Score=202.71  Aligned_cols=265  Identities=17%  Similarity=0.084  Sum_probs=176.8

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++.++||+.+...  +.++ .+|.+.+++.+++.......|+ .....+|++.+++++      + .+++|++++|+++
T Consensus        51 ~g~~ylD~~~~~~~--~~lG~~~p~v~~A~~~~~~~~~~~~~~-~~~~~~l~~~la~~~------~-~~~~v~~~~~Gse  120 (429)
T 3k28_A           51 DGNEYIDYVLSWGP--LIHGHANDRVVEALKAVAERGTSFGAP-TEIENKLAKLVIERV------P-SIEIVRMVNSGTE  120 (429)
T ss_dssp             TCCEEEESCGGGTT--CTTCBSCHHHHHHHHHHHHHCSCCSSC-CHHHHHHHHHHHHHS------T-TCSEEEEESSHHH
T ss_pred             CCCEEEECCCChhh--cccCCCCHHHHHHHHHHHhhCcCcCCC-CHHHHHHHHHHHHhC------C-CCCEEEEeCChHH
Confidence            37889999988754  2345 6899999999998765433344 345667888888776      2 5789999999999


Q ss_pred             HHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhc-CceeEEeecCCCCCCC------------CCHHHHHhhhcC--Cc
Q 019298          112 AIDVAMALLSR--PGANILLPRPGFPIYELSAAFR-HIEVRHFDLLPDKGWE------------VDLDDIESLADQ--NT  174 (343)
Q Consensus       112 al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~------------~d~~~l~~~~~~--~~  174 (343)
                      ++..+++.+..  ++++|++.+|+|+.+...+... |.....+......+..            -|+++|++.++.  +.
T Consensus       121 a~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~  200 (429)
T 3k28_A          121 ATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDD  200 (429)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGG
T ss_pred             HHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCC
Confidence            99999988754  5689999999997655433222 2222111111111100            178999988863  33


Q ss_pred             eEEEEeCC-CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCC
Q 019298          175 VALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW  252 (343)
Q Consensus       175 ~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~  252 (343)
                      .++++++| +|++|.+. +.+.+++|.++|++||+++|+||+|.++ ..+.. .....++...+   +.|+||+|+. |+
T Consensus       201 ~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~-~~~~~~~~~~d---i~t~sK~~~~-G~  274 (429)
T 3k28_A          201 IACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYN-CGQGYYGVTPD---LTCLGKVIGG-GL  274 (429)
T ss_dssp             EEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTT-HHHHHHTCCCS---EEEECGGGGT-TS
T ss_pred             EEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcc-hHHHHhCCCCc---eehhhhhhcC-CC
Confidence            45555666 55666654 6788999999999999999999999987 44321 11111222222   3478999974 99


Q ss_pred             cEEEEEEeCCCCCCCchHHHHHHhhh----hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC
Q 019298          253 RLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       253 r~G~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~  324 (343)
                      |+||++++        +++++.+...    ...+++.++++++++ .++|+...  -+.+++++++++.+.+.|++
T Consensus       275 ~iG~~~~~--------~~~~~~~~~~~~~~~~~t~~~~~~a~aaa-~aal~~~~--~~~~~~~~~~~~~l~~~L~~  339 (429)
T 3k28_A          275 PVGAYGGK--------AEIMRQVAPSGPIYQAGTLSGNPLAMAAG-YETLVQLT--PESYVEFERKAEMLEAGLRK  339 (429)
T ss_dssp             CCEEEEEC--------HHHHTTBTTTSSBCCCCTTTTCHHHHHHH-HHHHHTCC--HHHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEc--------HHHHhhhccCCCccccCCCCCChHHHHHH-HHHHHHHH--HHHHHHHHHHHHHHHHHHHH
Confidence            99999985        3677766542    223567788888888 66665432  23666677777777766654

>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*

Probab=99.92  E-value=1.4e-23  Score=193.54  Aligned_cols=240  Identities=12%  Similarity=0.144  Sum_probs=175.4

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCCC--CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEE
Q 019298           53 TTHVATEAVAEALLSEKFNGYAPTAG--LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILL  129 (343)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~Y~~~~g--~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~  129 (343)
                      .++++.+++.+++..    .|.++.|  ..++|++++++++        .+++++++|+++++..+++++ .++||+|++
T Consensus        10 ~~~~v~~a~~~~~~~----~~~~~~g~~~~~l~~~la~~~~--------~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~   77 (394)
T 1o69_A           10 MGGNELKYIEEVFKS----NYIAPLGEFVNRFEQSVKDYSK--------SENALALNSATAALHLALRVAGVKQDDIVLA   77 (394)
T ss_dssp             --CCHHHHHHHHHHH----TTTSCTTHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEE
T ss_pred             CCHHHHHHHHHHHHc----CCccCCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHcCCCCCCEEEE
Confidence            346777888887764    3655567  8899999999993        379999999999999999999 899999999


Q ss_pred             eCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC---CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcC
Q 019298          130 PRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGNPCGNVYSYQHLQKLAETANKLK  206 (343)
Q Consensus       130 ~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~  206 (343)
                      +.|+|..+...+...|.+++.++++  +++.+|++++++.+++   +++++++++   |||..   .++++|.++|+++|
T Consensus        78 ~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~---~~l~~i~~l~~~~~  149 (394)
T 1o69_A           78 SSFTFIASVAPICYLKAKPVFIDCD--ETYNIDVDLLKLAIKECEKKPKALILTH---LYGNA---AKMDEIVEICKEND  149 (394)
T ss_dssp             ESSSCGGGTHHHHHTTCEEEEECBC--TTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCC---CCHHHHHHHHHHTT
T ss_pred             CCCccHHHHHHHHHcCCEEEEEEeC--CCCCcCHHHHHHHHhcccCCceEEEEEC---CCCCh---hhHHHHHHHHHHcC
Confidence            9999999999999999999999876  4577999999998876   688888875   89976   67888899999999


Q ss_pred             cEEEEccCCC-ccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcccc-C
Q 019298          207 TLVIADEVYG-HLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-D  284 (343)
Q Consensus       207 ~~~i~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~-~  284 (343)
                      +++|+|++|. ++.+.+.....   +.  +  +.+.|+||..+++|.|+||+++++       ++++++++....... .
T Consensus       150 ~~li~Dea~~~g~~~~~~~~~~---~~--~--~~~~s~s~~K~l~~~~~G~~~~~~-------~~l~~~l~~~~~~~~~~  215 (394)
T 1o69_A          150 IVLIEDAAEALGSFYKNKALGT---FG--E--FGVYSYNGNKIITTSGGGMLIGKN-------KEKIEKARFYSTQAREN  215 (394)
T ss_dssp             CEEEEECTTCTTCEETTEETTS---SS--S--EEEEECCTTSSSCCSSCEEEEESC-------HHHHHHHHHHTBTCCCS
T ss_pred             CEEEEECcCcccceeCCccccc---cc--C--cEEEEEeCCccCCCCCceEEEECC-------HHHHHHHHHHHHhcccc
Confidence            9999999999 55544332111   11  1  455666544456678999999853       467777776532110 0


Q ss_pred             --------------cchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeC
Q 019298          285 --------------PATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFK  332 (343)
Q Consensus       285 --------------~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~  332 (343)
                                    .++....++ ...+   ..+.+.+++++++++.+.+.|.++  +.+..
T Consensus       216 ~~~~~~~~~g~~~~~~~~~aa~~-l~~l---~~l~~~~~~~~~~~~~l~~~L~~~--~~~~~  271 (394)
T 1o69_A          216 CLHYEHLDYGYNYRLSNVLGAIG-VAQM---EVLEQRVLKKREIYEWYKEFLGEY--FSFLD  271 (394)
T ss_dssp             SSSCCCSSCCCBCBCCHHHHHHH-HHHH---TTHHHHHHHHHHHHHHHHHHHTTT--EECCC
T ss_pred             CccccccccCcccCcCHHHHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHhccc--ccccC
Confidence                          122222222 1111   223337788888899999998876  55433

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*

Probab=99.92  E-value=9.7e-24  Score=197.99  Aligned_cols=298  Identities=11%  Similarity=-0.005  Sum_probs=200.6

Q ss_pred             cCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHH
Q 019298           11 TGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL   90 (343)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~   90 (343)
                      |........+...+.+....  ++....++....    + .+.++.+.+++.+++.... .+|...++..++++.+.+++
T Consensus        19 p~~g~~~~~v~~~~~~~~~~--~~~~~~~~~~f~----~-~~~~~~v~e~~~~a~~~~~-~~~~~~~~~~~l~~~~~~~l   90 (452)
T 2dgk_A           19 PLHEMRDDVAFQIINDELYL--DGNARQNLATFC----Q-TWDDENVHKLMDLSINKNW-IDKEEYPQSAAIDLRCVNMV   90 (452)
T ss_dssp             CCSCCCHHHHHHHHHHHGGG--SCCCTTBCSCCS----C-CCCCHHHHHHHHHTTTCBT-TCTTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHhcC--CCCCccCCCCee----C-CCchHHHHHHHHHHhccCC-CChhhChhHHHHHHHHHHHH
Confidence            33344556666666554421  122222332222    1 3455788898888876432 34555567788899998888


Q ss_pred             hhhCCCCCCC---CcEEEecChHHHHHHHHHHhcC--------CC-----CeEEEeCCCCcchHHHHHhcCceeEEeecC
Q 019298           91 SRDLPYKLTP---NDVFVTSGCTQAIDVAMALLSR--------PG-----ANILLPRPGFPIYELSAAFRHIEVRHFDLL  154 (343)
Q Consensus        91 ~~~~~~~~~~---~~i~~~~g~~~al~~~~~~l~~--------~g-----d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~  154 (343)
                      .+.+|.+.+.   ..+++|+|+++++..++.++..        +|     ++|++++ +|..+...+...|++++.++++
T Consensus        91 a~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~  169 (452)
T 2dgk_A           91 ADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMR  169 (452)
T ss_dssp             HHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCB
T ss_pred             HHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecC
Confidence            8877754332   2489999999999999888753        45     5899999 9999999999999999999886


Q ss_pred             CCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhc------CcEEEEccCCCcccc---CCCCC
Q 019298          155 PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL------KTLVIADEVYGHLVF---GDKPF  225 (343)
Q Consensus       155 ~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~------~~~~i~D~ay~~~~~---~~~~~  225 (343)
                      + +++.+|+++|++++++++++|++++|+||||.+   +++++|+++|+++      ++++++|++|+.+..   .+...
T Consensus       170 ~-~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~---~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~  245 (452)
T 2dgk_A          170 P-GQLFMDPKRMIEACDENTIGVVPTFGVTYTGNY---EFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIV  245 (452)
T ss_dssp             T-TBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBB---CCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCC
T ss_pred             C-CCCeECHHHHHHHHhhCCEEEEEEcCCcCCccc---CCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccch
Confidence            4 367899999999998889999999999999999   5677888888885      999999999998753   22111


Q ss_pred             CcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc----------ccCc---chHHHHH
Q 019298          226 VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI----------LGDP---ATFIQVC  292 (343)
Q Consensus       226 ~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~----------~~~~---~~~~~~a  292 (343)
                      ..   +...+-..++.|++| |++.|.++||+++.++..      +.+.+......          ..+.   ....+.+
T Consensus       246 ~~---~~~~~~d~~~~~~hK-~~~~~~~~G~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~a  315 (452)
T 2dgk_A          246 WD---FRLPRVKSISASGHK-FGLAPLGCGWVIWRDEEA------LPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYY  315 (452)
T ss_dssp             CS---TTSTTEEEEEEETTT-TTCCCSSCEEEEESSGGG------SCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHH
T ss_pred             hh---cCCCCCcEEEECccc-ccCCCCCeEEEEEcCHHH------HHHHhccCccccCCCCCCcccCCCChhHHHHHHHH
Confidence            11   111122367788999 578899999999965321      11222111000          0111   2233333


Q ss_pred             HHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298          293 IMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKS  333 (343)
Q Consensus       293 ~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~  333 (343)
                      + ...+.. ..+.+..++..++++++.+.|++++++++..|
T Consensus       316 a-l~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~  354 (452)
T 2dgk_A          316 E-FLRLGR-EGYTKVQNASYQVAAYLADEIAKLGPYEFICT  354 (452)
T ss_dssp             H-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEE
T ss_pred             H-HHHHhH-HHHHHHHHHHHHHHHHHHHHHHhCCCeEEecC
Confidence            3 222211 23334788889999999999999988886543

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*

Probab=99.92  E-value=6.1e-24  Score=199.17  Aligned_cols=287  Identities=14%  Similarity=0.058  Sum_probs=175.7

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      +++.++||+.+......++ .+|.+.+++.+++...  ..|....+..+.++++++++.+..+  ...++|++++|++++
T Consensus        42 ~g~~ylD~~~~~~~~~lG~-~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA  116 (448)
T 3dod_A           42 NGKEYYDGFSSVWLNVHGH-RKKELDDAIKKQLGKI--AHSTLLGMTNVPATQLAETLIDISP--KKLTRVFYSDSGAEA  116 (448)
T ss_dssp             TSCEEEETTHHHHTCSSCB-SCHHHHHHHHHHHTTC--SCCCCSSSEEHHHHHHHHHHHHHSC--TTEEEEEEESSHHHH
T ss_pred             CCCEEEECCcchhhccCCC-CCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHHH
Confidence            3778899998864322222 5899999999998754  2233344556777888888876553  345899999999999


Q ss_pred             HHHHHHHhcC----CC----CeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCCCCCCCC----------
Q 019298          113 IDVAMALLSR----PG----ANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGWEV----------  161 (343)
Q Consensus       113 l~~~~~~l~~----~g----d~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~----------  161 (343)
                      +..+++.+..    +|    |+|++.+|+|+++...+...+.             .+..++.  .+.+..          
T Consensus       117 ~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  194 (448)
T 3dod_A          117 MEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPI--PYVYRSESGDPDECRD  194 (448)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECC--CCCTTSSSCCHHHHHH
T ss_pred             HHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCC--CccccCCccchhhhhH
Confidence            9999998865    44    9999999999876654443322             1222222  122222          


Q ss_pred             -CHHHHHhhhc---CCceEEEEeCCC-CCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCC
Q 019298          162 -DLDDIESLAD---QNTVALVIINPG-NPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV  235 (343)
Q Consensus       162 -d~~~l~~~~~---~~~~~i~~~~p~-nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~  235 (343)
                       |+++|++.++   +++.++++..++ |++|. .++.+.+++|.++|++||+++|+||+|.++.+.+... ....++...
T Consensus       195 ~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-a~~~~~~~~  273 (448)
T 3dod_A          195 QCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMF-ACEHENVQP  273 (448)
T ss_dssp             HHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCC
T ss_pred             HHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchh-hhhhcCCCC
Confidence             4788988886   234444444445 88885 4677889999999999999999999999876655422 222222222


Q ss_pred             CEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhh-------hh-ccccCcchHHHHHHHhccchhh--HHH
Q 019298          236 PILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKK-------YF-DILGDPATFIQVCIMYGCLSTI--MQI  304 (343)
Q Consensus       236 ~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~-------~~-~~~~~~~~~~~~a~~~~~l~~~--~~~  304 (343)
                      +   +.+|||+++. | +|+||++++        +++++.+..       .. ..+++.++++++++ .++|+..  .++
T Consensus       274 d---i~t~sK~l~~-G~~~ig~v~~~--------~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa-~aal~~~~~~~~  340 (448)
T 3dod_A          274 D---LMAAGKGITG-GYLPIAVTFAT--------EDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVA-LENLALFESENI  340 (448)
T ss_dssp             S---EEEECGGGGT-TSSCCEEEEEE--------HHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHH-HHHHHHHHHTTH
T ss_pred             C---EEEecccccC-CcCceEEEEEC--------HHHHHHhhhccccCCcccccCCCCcCHHHHHHH-HHHHHHHhcccH
Confidence            2   3368999865 8 599999985        478887765       32 23567788888887 5555421  122


Q ss_pred             HH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298          305 MI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD  342 (343)
Q Consensus       305 l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~  342 (343)
                      ++ .++..+..++.+.+ +..+|.+....+ .|.++|++
T Consensus       341 ~~~~~~~~~~~~~~l~~-l~~~~~~~~~~~-~g~~~~~~  377 (448)
T 3dod_A          341 VEQVAEKSKKLHFLLQD-LHALPHVGDIRQ-LGFMCGAE  377 (448)
T ss_dssp             HHHHHHHHHHHHHHHHH-HTTSTTEEEEEE-ETTEEEEE
T ss_pred             HHHHHHHHHHHHHHHHH-HhcCCCeEEEEe-eeEEEEEE
Confidence            22 33333334444444 445544433223 35566654

>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*

Probab=99.92  E-value=3.1e-24  Score=202.08  Aligned_cols=264  Identities=15%  Similarity=0.125  Sum_probs=172.4

Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCC-----C----C
Q 019298           55 HVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP-----G----A  125 (343)
Q Consensus        55 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~-----g----d  125 (343)
                      +.+.+++.+++..+. ..|.+..+..+|++++++++.        .+++++|+|+++++..+++++.++     |    |
T Consensus        53 ~~v~~a~~~~l~~~~-~~y~~~~~~~~l~~~la~~~~--------~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d  123 (467)
T 2oqx_A           53 GAVTQSMQAAMMRGD-EAYSGSRSYYALAESVKNIFG--------YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSK  123 (467)
T ss_dssp             SCCCHHHHHHTTSCC-CCSSSCHHHHHHHHHHHHHHC--------CSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTT
T ss_pred             HHHHHHHHHHhccCc-ceeccCchhHHHHHHHHHHhC--------cCcEEEcCCcHHHHHHHHHHHhccccccCCCCccc
Confidence            777788888775433 368777788999999999992        479999999999999999999887     8    9


Q ss_pred             eEEEeCCCCcchHHHHHhcCceeEEeec----CCC----CCCCCCHHHHHhhhcC----CceEEEEeCCCCCc-ccccCH
Q 019298          126 NILLPRPGFPIYELSAAFRHIEVRHFDL----LPD----KGWEVDLDDIESLADQ----NTVALVIINPGNPC-GNVYSY  192 (343)
Q Consensus       126 ~vl~~~p~~~~~~~~~~~~g~~~~~~~~----~~~----~~~~~d~~~l~~~~~~----~~~~i~~~~p~npt-G~~~~~  192 (343)
                      +|++..+.|..+.......|........    ...    .++.+|+++|++++++    ++++|++++|+||+ |.+++.
T Consensus       124 ~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~  203 (467)
T 2oqx_A          124 MVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSL  203 (467)
T ss_dssp             CEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCH
T ss_pred             eEEecccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCH
Confidence            9887744444444455556665543311    111    2356899999999873    68899999999998 999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCc----------cccCCCCCCcccc--cCCCCCEEEEccCccccCCC-CCcEEEEEE
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGH----------LVFGDKPFVPMGV--FGSTVPILTLGSLSKRWIVP-GWRLGWFVT  259 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~----------~~~~~~~~~~~~~--~~~~~~~i~~~S~sK~~~~~-G~r~G~i~~  259 (343)
                      +++++|+++|++||+++|+|+++..          ..+.+.....+..  .... . +++.|+||.++++ |   ||+++
T Consensus       204 ~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~-d-~~~~s~sK~~g~~~G---g~~~~  278 (467)
T 2oqx_A          204 ANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYA-D-MLAMSAKKDAMVPMG---GLLCM  278 (467)
T ss_dssp             HHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGC-S-EEEEESSSTTCCSSC---EEEEE
T ss_pred             HHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccC-C-eEEEecccccCCCCc---eEEEe
Confidence            9999999999999999999966543          1222322111110  0111 2 4578999998876 4   77777


Q ss_pred             eCCCCCCCchHHHHHHhhhh--c-c---ccCcchHHHHHHHhccchhhHHHH--HHHHHHHHHHHHHHHhhcCCCCceee
Q 019298          260 TDPCGMFRKPKVVERMKKYF--D-I---LGDPATFIQVCIMYGCLSTIMQIM--IHGNFLENFAGSCVPSYKLIPELINF  331 (343)
Q Consensus       260 ~~~~~~~~~~~~~~~l~~~~--~-~---~~~~~~~~~~a~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~L~~~~g~~~~  331 (343)
                      +++. +   -+...+++...  . .   ....+.....++ ...+   ..++  +..++..++++.+.+.|+++ |+.+.
T Consensus       279 ~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al-~~~l---~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~  349 (467)
T 2oqx_A          279 KDDS-F---FDVYTECRTLCVVQEGFPTYGGLEGGAMERL-AVGL---YDGMNLDWLAYRIAQVQYLVDGLEEI-GVVCQ  349 (467)
T ss_dssp             CSGG-G---HHHHHHHHHHHHHTTSSCCCCCCCHHHHHHH-HHHH---HHTTCHHHHHHHHHHHHHHHHHHHHT-TCCEE
T ss_pred             cChh-H---HHHHHHHHHhhhccCCcccccchhhhHHHHH-HHhh---HhhhhHHHHHHHHHHHHHHHHHHHHC-CCeee
Confidence            5410 0   02334444321  1 0   111122222222 1111   1222  14455567888888999888 78876


Q ss_pred             CCCCceEeeec
Q 019298          332 KSTGSSLKYLD  342 (343)
Q Consensus       332 ~~~~g~~~~~~  342 (343)
                       |.+++++|++
T Consensus       350 -~~~~~~~~~~  359 (467)
T 2oqx_A          350 -QAGGHAAFVD  359 (467)
T ss_dssp             -EECSSCEEEE
T ss_pred             -cCCceEEEEe
Confidence             8889999975

>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*

Probab=99.92  E-value=2.9e-23  Score=191.26  Aligned_cols=242  Identities=17%  Similarity=0.126  Sum_probs=176.8

Q ss_pred             HHHHHHHHHHHhc------CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE---ecChHHHHHHHHHHhcCCCC
Q 019298           55 HVATEAVAEALLS------EKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV---TSGCTQAIDVAMALLSRPGA  125 (343)
Q Consensus        55 ~~~~~~~~~~~~~------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~---~~g~~~al~~~~~~l~~~gd  125 (343)
                      ..+++++.++...      ...+.|+. .+...|++.+|++++        .+..++   ++|+++++..++.+++++||
T Consensus        32 ~~vl~a~~~~~~~~~~~~~~~~~~y~~-~~~~~Le~~lA~l~g--------~e~alv~p~~~sGt~Ai~~al~all~~GD  102 (409)
T 3jzl_A           32 AKVLDAFQENKVSDFHFHPSTGYGYDD-EGRDTLERVYATVFK--------TEAALVRPQIISGTHAISTVLFGILRPDD  102 (409)
T ss_dssp             HHHHHHHHHTTCCGGGGCCCCTTCTTC-HHHHHHHHHHHHHHT--------CSEEEEETTSCSHHHHHHHHHHHHCCTTC
T ss_pred             HHHHHHHHHhhhhhhccCCCcCCCCCh-hHHHHHHHHHHHHhC--------CCcEEEECCCccHHHHHHHHHHHhcCCCC
Confidence            5566777665321      12234555 356889999999983        355555   88999999999999999999


Q ss_pred             eEEEeC-CCCcchHHH----------HHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeC----CCCCccccc
Q 019298          126 NILLPR-PGFPIYELS----------AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN----PGNPCGNVY  190 (343)
Q Consensus       126 ~vl~~~-p~~~~~~~~----------~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~----p~nptG~~~  190 (343)
                      +|++++ |.|..+...          ++..|.+++.+++++  ++.+|++++++++++++++|++++    |+||||.+ 
T Consensus       103 ~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~--~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v-  179 (409)
T 3jzl_A          103 ELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLE--NGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTI-  179 (409)
T ss_dssp             EEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCT--TSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCH-
T ss_pred             EEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCC--CCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCcc-
Confidence            999998 999988743          356688888887753  467999999999998999999999    99999988 


Q ss_pred             CHHHHHHHHHHHhh--cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCC
Q 019298          191 SYQHLQKLAETANK--LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFR  267 (343)
Q Consensus       191 ~~~~l~~l~~~~~~--~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~  267 (343)
                        .++++|+++|++  +|+++++|++|+.+.+...+   . ..   +..++++|+||.++.+| .+.||++++       
T Consensus       180 --~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p---~-~~---g~Div~~S~sK~lgg~~~~~GG~v~~~-------  243 (409)
T 3jzl_A          180 --EKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEP---P-EV---GADIIAGSLIKNPGGGLAKTGGYIAGK-------  243 (409)
T ss_dssp             --HHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCS---G-GG---TCSEEEEETTSGGGTTTCSSCEEEEEC-------
T ss_pred             --ccHHHHHHHHHhhCCCCEEEEeCCcccccccCCc---c-cc---CCeEEEECccccCCccCCceEEEEEeC-------
Confidence              889999999999  99999999999987643221   1 11   23499999999998877 456888884       


Q ss_pred             chHHHHHHhhhhc---c--ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298          268 KPKVVERMKKYFD---I--LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN  330 (343)
Q Consensus       268 ~~~~~~~l~~~~~---~--~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~  330 (343)
                       ++++++++....   .  ...+......++ ...+   ...-.++++..+++..+.+.|+++ |+.+
T Consensus       244 -~~li~~l~~~~~~~~~g~~~g~~~~~~~~~-l~gl---~~~~~r~~~~~~~a~~la~~L~~~-g~~v  305 (409)
T 3jzl_A          244 -EALVDLCGYRLTTPGIGREAGASLYSLLEM-YQGF---FLAPHVTAQAIKGARFTAAMLAEF-GVEA  305 (409)
T ss_dssp             -HHHHHHHHHHHSCTTTGGGCCCCTTCHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred             -HHHHHHHHHHhccccccccccccHHHHHHH-HHHH---hhHHHHHHHHHHHHHHHHHHHHhC-CCcc
Confidence             478888876432   1  111111112222 1111   222237778888999999999998 6676

>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*

Probab=99.92  E-value=1.9e-24  Score=201.75  Aligned_cols=275  Identities=15%  Similarity=0.056  Sum_probs=178.5

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      ++.++||+.+.+...  ++ .+|.+.+++.+++.......|+     .++++.+++.+.+..+   .+++|++++|++++
T Consensus        55 g~~~lD~~~~~~~~~--lG~~~~~v~~a~~~~~~~~~~~~~~-----~~~~~~l~~~la~~~~---~~~~v~~~~sgseA  124 (434)
T 2epj_A           55 GARIVDLVLAYGPLI--LGHKHPRVLEAVEEALARGWLYGAP-----GEAEVLLAEKILGYVK---RGGMIRFVNSGTEA  124 (434)
T ss_dssp             CCEEEESSGGGTTCT--TCBTCHHHHHHHHHHHHTCSCCSSC-----CHHHHHHHHHHHHHHC---TTCEEEEESSHHHH
T ss_pred             CCEEEEcccchhccc--CCCCCHHHHHHHHHHHHhCCCCCCC-----CHHHHHHHHHHHHhCC---CCCEEEEeCCHHHH
Confidence            677899998875422  33 6899999999998764322332     2344444444444332   57899999999999


Q ss_pred             HHHHHHH---hcCCCCeEEEeCCCCcchHHHHHh--------------cCc------eeEEeecCCCCCCCCCHHHHHhh
Q 019298          113 IDVAMAL---LSRPGANILLPRPGFPIYELSAAF--------------RHI------EVRHFDLLPDKGWEVDLDDIESL  169 (343)
Q Consensus       113 l~~~~~~---l~~~gd~vl~~~p~~~~~~~~~~~--------------~g~------~~~~~~~~~~~~~~~d~~~l~~~  169 (343)
                      +..+++.   +. +++.|++.+|+|+++...+..              .|.      ++..++.       .|+++|++.
T Consensus       125 ~~~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~  196 (434)
T 2epj_A          125 TMTAIRLARGYT-GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALERV  196 (434)
T ss_dssp             HHHHHHHHHHHH-CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHHH
T ss_pred             HHHHHHHHHHhh-CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHHH
Confidence            9999987   44 457888888999875442211              122      2333332       278999988


Q ss_pred             hcC--CceEEEEeCC-CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCcc
Q 019298          170 ADQ--NTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK  245 (343)
Q Consensus       170 ~~~--~~~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK  245 (343)
                      +++  +..++++++| +|+||.+. +.+.+++|.++|++||+++|+||+|.++.. +. ......++...+   +.||||
T Consensus       197 l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~-g~-~~~~~~~~~~~d---i~s~sK  271 (434)
T 2epj_A          197 FAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRL-GL-EGAQGYFNIEGD---IIVLGK  271 (434)
T ss_dssp             HHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTS-ST-THHHHHHTCCCS---EEEEEG
T ss_pred             HHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeC-Cc-chhhHHhCCCCC---eeeecc
Confidence            864  2345566667 57899876 799999999999999999999999997732 22 111111221222   248899


Q ss_pred             ccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh----hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHh
Q 019298          246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPS  321 (343)
Q Consensus       246 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~  321 (343)
                      .++. |+|+||++++        +++++.+...    ...+++.++++++++ .++|+...+ -+..++++++++.+.+.
T Consensus       272 ~l~~-G~~~G~v~~~--------~~~~~~l~~~~~~~~~~t~~~~~~~~aa~-~a~l~~~~~-~~~~~~~~~~~~~l~~~  340 (434)
T 2epj_A          272 IIGG-GFPVGAVAGS--------REVMSLLTPQGKVFNAGTFNAHPITMAAG-LATLKALEE-EPVYSVSREAAKALEEA  340 (434)
T ss_dssp             GGGT-TSSCEEEEEC--------HHHHTTBTTTSSBCCCCTTTTCHHHHHHH-HHHHHHHHH-SCHHHHHHHHHHHHHHH
T ss_pred             hhcC-Ccceeeeeec--------HHHHHhhccCCCcccCCCCCcCHHHHHHH-HHHHHHHHh-cCHHHHHHHHHHHHHHH
Confidence            9987 9999999985        3566666542    122446788887777 454432211 11667777788888777


Q ss_pred             hcCCC---CceeeCCCCceEeeec
Q 019298          322 YKLIP---ELINFKSTGSSLKYLD  342 (343)
Q Consensus       322 L~~~~---g~~~~~~~~g~~~~~~  342 (343)
                      |+++.   ++....+..|+++|++
T Consensus       341 L~~~~~~~~~~~~~~~~g~~~~i~  364 (434)
T 2epj_A          341 ASEVLDRTGLPYTINRVESMMQLF  364 (434)
T ss_dssp             HHHHHHHHTCCEEEEEETTEEEEE
T ss_pred             HHHHHhhCCCcEEEEEeeeEEEEE
Confidence            76531   3332123356677765

>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}

Probab=99.92  E-value=6.4e-24  Score=194.19  Aligned_cols=240  Identities=15%  Similarity=0.089  Sum_probs=176.0

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeC
Q 019298           53 TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPR  131 (343)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~  131 (343)
                      ..+.+.+++.+.+...   .|.+..+..++|+.++++++        .+++++++|+++++..+++++ .++||+|+++.
T Consensus        15 ~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~   83 (373)
T 3frk_A           15 IEYEIKFKFEEIYKRN---WFILGDEDKKFEQEFADYCN--------VNYCIGCGNGLDALHLILKGYDIGFGDEVIVPS   83 (373)
T ss_dssp             HHHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHT--------SSEEEEESCHHHHHHHHHHHTTCCTTCEEEEET
T ss_pred             CCHHHHHHHHHHHHCC---CccCCchHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECC
Confidence            4677888888877653   46666788999999999993        358999999999999999999 89999999999


Q ss_pred             CCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEE
Q 019298          132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA  211 (343)
Q Consensus       132 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~  211 (343)
                      |+|..+...++..|.+++.+++++ +++.+|++++++++++++++++   |+||||...   ++++|.++|+++|+++|+
T Consensus        84 ~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~---~l~~i~~l~~~~~~~li~  156 (373)
T 3frk_A           84 NTFIATALAVSYTGAKPIFVEPDI-RTYNIDPSLIESAITEKTKAII---AVHLYGQPA---DMDEIKRIAKKYNLKLIE  156 (373)
T ss_dssp             TSCTHHHHHHHHHSCEEEEECEET-TTTEECGGGTGGGCCTTEEEEE---EECCTTCCC---CHHHHHHHHHHHTCEEEE
T ss_pred             CCcHHHHHHHHHcCCEEEEEeccc-cccCcCHHHHHHhcCCCCeEEE---EECCCcCcc---cHHHHHHHHHHcCCEEEE
Confidence            999999999999999999998865 3578999999999988777777   788999984   467888889999999999


Q ss_pred             ccCCCccc-cCCCCCCcccccCCCCCEEEEccCc--cccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-------
Q 019298          212 DEVYGHLV-FGDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-------  281 (343)
Q Consensus       212 D~ay~~~~-~~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-------  281 (343)
                      |++|+.+. +++..   ...+.    .+++.|||  |.++..|. .|++++++       +++.++++.....       
T Consensus       157 D~a~~~g~~~~~~~---~~~~~----d~~~~S~~~~K~l~~~g~-gg~~~~~~-------~~~~~~~~~~~~~g~~~~~~  221 (373)
T 3frk_A          157 DAAQAHGSLYKGMK---VGSLG----DAAGFSFYPAKNLGSLGD-GGAVVTND-------KDLAEKIKALSNYGSEKKYH  221 (373)
T ss_dssp             ECTTCTTCEETTEE---TTSSS----SEEEEECCTTSSSCCSSS-CEEEEESC-------HHHHHHHHHHHBTTCSBTTB
T ss_pred             ECCcccCCEECCEe---ccccc----cEEEEeCcCCCccCccce-eEEEEeCC-------HHHHHHHHHHHhcCcccCCc
Confidence            99998643 22221   11111    27888877  88655353 78888753       3576766654321       


Q ss_pred             ------ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298          282 ------LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN  330 (343)
Q Consensus       282 ------~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~  330 (343)
                            ....+++..++. ...+   ..+-+..++.+++.+.+.+.|.+++ +.+
T Consensus       222 ~~~~g~~~~~~~~~aa~~-~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~-~~~  271 (373)
T 3frk_A          222 HIYKGFNSRLDELQAGFL-RVKL---KYLDKWNEERRKIAQKYIAGINNPN-VII  271 (373)
T ss_dssp             CCSCCCBCCCCHHHHHHH-HHHH---HTHHHHHHHHHHHHHHHHHHCCCTT-EEC
T ss_pred             cccccccCCCCHHHHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHhccCc-eEe
Confidence                  112233333333 2221   1222366677777888888888875 554

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}

Probab=99.92  E-value=8.2e-23  Score=189.41  Aligned_cols=245  Identities=17%  Similarity=0.125  Sum_probs=174.8

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEE
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAPT--AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANIL  128 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl  128 (343)
                      ++.++.+.+++.   .. ..+.|+..  ....++++.++++++        .+++++++|+++++..++++++++||+|+
T Consensus        32 ~~~~~~~~~~~~---~~-~~~~y~~~~~~~~~~l~~~la~~~g--------~~~~~~~~~gt~a~~~al~~l~~~gd~vi   99 (412)
T 2cb1_A           32 FKTLEEGQERFA---TG-EGYVYARQKDPTAKALEERLKALEG--------ALEAVVLASGQAATFAALLALLRPGDEVV   99 (412)
T ss_dssp             CSSHHHHHHHHH---HC-CSCSBTTTCCHHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHTTCCTTCEEE
T ss_pred             cCChHHHHHHhc---cc-cCcCcCCCCChHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEE
Confidence            556666666654   22 22356643  346788999999883        35899999999999999999999999999


Q ss_pred             EeCCCCcchHHHH----HhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298          129 LPRPGFPIYELSA----AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (343)
Q Consensus       129 ~~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~  204 (343)
                      ++.|+|..+....    +..|.+++.++.        |+++|++++++++++|++++|+||||.+.+   +++|+++|++
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~l~~~  168 (412)
T 2cb1_A          100 AAKGLFGQTIGLFGQVLSLMGVTVRYVDP--------EPEAVREALSAKTRAVFVETVANPALLVPD---LEALATLAEE  168 (412)
T ss_dssp             EETTCCHHHHHHHHHTTTTTTCEEEEECS--------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHH
T ss_pred             EeCCCchhHHHHHHHHHHHcCCEEEEECC--------CHHHHHHHhccCCeEEEEeCCCCCCccccc---HHHHHHHHHH
Confidence            9999998755543    446888887754        389999999888999999999999999975   7888999999


Q ss_pred             cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCC------C-----------
Q 019298          205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF------R-----------  267 (343)
Q Consensus       205 ~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~------~-----------  267 (343)
                      +|+++|+|++|..+.+...   +.    ..+.++++.|+||.++++|.|+|++++.++...+      .           
T Consensus       169 ~~~~li~D~~~~~~~~~~~---~~----~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  241 (412)
T 2cb1_A          169 AGVALVVDNTFGAAGALCR---PL----AWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWE  241 (412)
T ss_dssp             HTCEEEEECGGGTTTTSCC---GG----GGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HH
T ss_pred             cCCEEEEECCCccccccCC---cc----ccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhh
Confidence            9999999999987621111   11    1235699999999999999999999887633100      0           


Q ss_pred             ---chHHHHHHhhhh-cc-ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce
Q 019298          268 ---KPKVVERMKKYF-DI-LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI  329 (343)
Q Consensus       268 ---~~~~~~~l~~~~-~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~  329 (343)
                         ..++.+.++... .. ....++....+. ...+   ..+.+..++..++.+.+.+.|.+.+++.
T Consensus       242 ~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~-~~~l---~~l~~~~~~~~~~~~~l~~~L~~~~~v~  304 (412)
T 2cb1_A          242 ALRARCFPERVRTLGLSLCGMALSPFNAYLL-FQGL---ETVALRVARMSETARFLAERLQGHPKVK  304 (412)
T ss_dssp             HHGGGHHHHHHHHHHTTTTCCCCCHHHHHHH-HHHG---GGHHHHHHHHHHHHHHHHHHHHTCTTCS
T ss_pred             ccchHHHHHHHHHHHHHhcCCCCChHHhHHH-HcCC---chHHHHHHHHHHHHHHHHHHHHcCCCee
Confidence               013455555443 21 123344444433 2222   2233355566778888899998888887

>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.92  E-value=6.7e-24  Score=195.43  Aligned_cols=212  Identities=16%  Similarity=0.072  Sum_probs=157.8

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH----HHHhcCceeEEee
Q 019298           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFD  152 (343)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~  152 (343)
                      ....++|+.++++++        .++.++++++++++..+++ ++++||+|+++.|+|.+...    .++..|.+++.++
T Consensus        55 ~~~~~lr~~la~~~g--------~~~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~  125 (393)
T 1n8p_A           55 PNRENLERAVAALEN--------AQYGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTN  125 (393)
T ss_dssp             HHHHHHHHHHHHHTT--------CSEEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEES
T ss_pred             hhHHHHHHHHHHHhC--------CCcEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeC
Confidence            346789999999983        2256666666999999999 88999999999999985443    3455688888886


Q ss_pred             cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhc----CcEEEEccCCCccccCCCCCCcc
Q 019298          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL----KTLVIADEVYGHLVFGDKPFVPM  228 (343)
Q Consensus       153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~----~~~~i~D~ay~~~~~~~~~~~~~  228 (343)
                      .+       | +++++++++++++|++++|+||||.+++   +++|+++|+++    |+++|+|++|..+.+.  .+   
T Consensus       126 ~~-------d-~~l~~~i~~~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~--~~---  189 (393)
T 1n8p_A          126 DL-------L-NDLPQLIKENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS--NP---  189 (393)
T ss_dssp             SH-------H-HHHHHHSCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC--CG---
T ss_pred             CC-------h-HHHHHhcccCceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccC--CH---
Confidence            53       6 8899999888999999999999999986   78888889999    9999999999987653  11   


Q ss_pred             cccCCCCCEEEEccCccccCCCCCcE-EEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH
Q 019298          229 GVFGSTVPILTLGSLSKRWIVPGWRL-GWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI  306 (343)
Q Consensus       229 ~~~~~~~~~i~~~S~sK~~~~~G~r~-G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~  306 (343)
                      ..+   +.++++.|+||.++.+|+|+ ||+++++       +++++.++..... ....++....++ ...+.   .+..
T Consensus       190 ~~~---~~di~~~S~sK~~g~~G~rigG~~~~~~-------~~~~~~l~~~~~~~g~~~~~~~~~~~-~~~l~---~~~~  255 (393)
T 1n8p_A          190 LNF---GADIVVHSATKYINGHSDVVLGVLATNN-------KPLYERLQFLQNAIGAIPSPFDAWLT-HRGLK---TLHL  255 (393)
T ss_dssp             GGG---TCSEEEEETTTTTTCSSCCCCEEEEESC-------HHHHHHHHHHHHHHCCCCCHHHHHHH-HHHHT---THHH
T ss_pred             HHc---CCeEEEEECcccccCCCCceeEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHH-Hhccc---hHHH
Confidence            112   35699999999999999999 9988742       3677777765432 234455554444 22222   2223


Q ss_pred             HHHHHHHHHHHHHHhhcCCCC
Q 019298          307 HGNFLENFAGSCVPSYKLIPE  327 (343)
Q Consensus       307 ~~~~~~~~~~~~~~~L~~~~g  327 (343)
                      ..++..+++..+.+.|.+.+.
T Consensus       256 ~~~~~~~~~~~l~~~L~~~~~  276 (393)
T 1n8p_A          256 RVRQAALSANKIAEFLAADKE  276 (393)
T ss_dssp             HHHHHHHHHHHHHHHHTSCTT
T ss_pred             HHHHHHHHHHHHHHHHHhCCC
Confidence            556666777777788877654

>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*

Probab=99.92  E-value=5.3e-24  Score=199.79  Aligned_cols=286  Identities=12%  Similarity=0.093  Sum_probs=186.8

Q ss_pred             ccc--ceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCC---CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 019298           33 NEK--KVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF---NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT  106 (343)
Q Consensus        33 ~~~--~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~  106 (343)
                      +++  +++||..|...  +.++ .+|.+.+++++++.....   ..|+ .....+|++.+++++      +...++|+++
T Consensus        71 dG~~~~ylD~~s~~~~--~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~-~~~~~~L~e~la~~~------~~~~~~v~~~  141 (457)
T 3tfu_A           71 DGQPIEVLDAMSSWWT--AIHGHGHPALDQALTTQLRVMNHVMFGGLT-HEPAARLAKLLVDIT------PAGLDTVFFS  141 (457)
T ss_dssp             TTEEEEEEETTHHHHT--CTTCBTCHHHHHHHHHHHHHCSCCCSSSEE-CHHHHHHHHHHHHHS------STTEEEEEEE
T ss_pred             CCCeeEEEECCCcHhh--hccCCCCHHHHHHHHHHHHhccCccccccC-CHHHHHHHHHHHHhC------CCCcCEEEEe
Confidence            466  89999888532  2244 789999999999875321   1122 123345555555554      3456799999


Q ss_pred             cChHHHHHHHHHHhcC-------CC-CeEEEeCCCCcchHHHHHhcCc--------------eeEEeecCCCCCCCCCHH
Q 019298          107 SGCTQAIDVAMALLSR-------PG-ANILLPRPGFPIYELSAAFRHI--------------EVRHFDLLPDKGWEVDLD  164 (343)
Q Consensus       107 ~g~~~al~~~~~~l~~-------~g-d~vl~~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~~~~~~d~~  164 (343)
                      +|+++++..+++.+..       +| +.|++.+++|.++...+...+.              .+..++.........|++
T Consensus       142 ~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~  221 (457)
T 3tfu_A          142 DSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSA  221 (457)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHH
Confidence            9999999999998864       55 5899999999887655554421              223333222111124788


Q ss_pred             HHHhhhc---CCceEEEEeC-CCCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEE
Q 019298          165 DIESLAD---QNTVALVIIN-PGNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT  239 (343)
Q Consensus       165 ~l~~~~~---~~~~~i~~~~-p~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~  239 (343)
                      +|+++++   +++++++++. ++|++|..+ +.+.+++|.++|++||+++|+||+|.++.+.+... ....++...+++ 
T Consensus       222 ~le~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~-a~~~~~~~pdii-  299 (457)
T 3tfu_A          222 AFEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALF-AADHAGVSPDIM-  299 (457)
T ss_dssp             HHHHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE-
T ss_pred             HHHHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchh-HhHhcCCCceEE-
Confidence            9998886   4556666666 689999886 77889999999999999999999999876555421 222223223333 


Q ss_pred             EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh------hhccccCcchHHHHHHHhccchhhHHHHHHHHHHHH
Q 019298          240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK------YFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLEN  313 (343)
Q Consensus       240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~  313 (343)
                        ||||.++...+|+||++++        +++++.+..      ....+++.++++++++ .++|+...+ -+..+++++
T Consensus       300 --t~sK~l~gG~~~lG~v~~~--------~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa-~aaL~~~~~-~~~~~~~~~  367 (457)
T 3tfu_A          300 --CVGKALTGGYLSLAATLCT--------ADVAHTISAGAAGALMHGPTFMANPLACAVS-VASVELLLG-QDWRTRITE  367 (457)
T ss_dssp             --EECGGGGTTSSCCEEEEEE--------HHHHHHHHHSSSCSCCCCCTTTTCHHHHHHH-HHHHHHHHT-SCHHHHHHH
T ss_pred             --EEChhhhCCCcceEEEEEc--------HHHHHHhhccCCCceeEecCCCcCHHHHHHH-HHHHHHHhh-hHHHHHHHH
Confidence              8899875433799999995        478888752      1223567788888887 454432100 015666777


Q ss_pred             HHHHHHHhhcCC---CCceeeCCCCceEeeec
Q 019298          314 FAGSCVPSYKLI---PELINFKSTGSSLKYLD  342 (343)
Q Consensus       314 ~~~~~~~~L~~~---~g~~~~~~~~g~~~~~~  342 (343)
                      +++.+.+.|+.+   |++....+. |+|+|++
T Consensus       368 ~~~~l~~~L~~l~~~~~v~~vr~~-G~~~~i~  398 (457)
T 3tfu_A          368 LAAGLTAGLDTARALPAVTDVRVC-GAIGVIE  398 (457)
T ss_dssp             HHHHHHHHHGGGGGSTTEEEEEEC-SSCEEEE
T ss_pred             HHHHHHHHHHHHhcCCCeeeeecC-CeEEEEE
Confidence            777777777653   455433333 5566654

>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*

Probab=99.92  E-value=1.7e-23  Score=193.41  Aligned_cols=242  Identities=17%  Similarity=0.128  Sum_probs=175.5

Q ss_pred             HHHHHHHHHHHhcC------CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE---ecChHHHHHHHHHHhcCCCC
Q 019298           55 HVATEAVAEALLSE------KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV---TSGCTQAIDVAMALLSRPGA  125 (343)
Q Consensus        55 ~~~~~~~~~~~~~~------~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~---~~g~~~al~~~~~~l~~~gd  125 (343)
                      +.+++++.++....      ....|+. .|...|++.+|++++        .+..++   ++|+++++..++.+++++||
T Consensus        46 ~~Vl~A~~~~~~~~~~~~~~~gy~y~~-~~~~~Le~~lA~l~g--------~e~alv~p~~~sGt~Ai~~al~all~pGD  116 (427)
T 3i16_A           46 LKVLNAFQEERISEAHFTNSSGYGYGD-IGRDSLDAVYARVFN--------TESALVRPHFVNGTHALGAALFGNLRPGN  116 (427)
T ss_dssp             HHHHHHHHHTTCCGGGSCCCCTTCTTC-HHHHHHHHHHHHHHT--------CSEEEEETTCCSHHHHHHHHHHHHCCTTC
T ss_pred             HHHHHHHHHhchhHHhcCCCCCCCCCH-HHHHHHHHHHHHHhC--------CcceEEeCCCccHHHHHHHHHHHHhCCCC
Confidence            56777776643111      1224444 357889999999983        344455   78889999999999999999


Q ss_pred             eEEEeC-CCCcchHHH-----------HHhcCceeEEeecCCCCCCCCCHHHHHhhhc--CCceEEEEeC----CCCCcc
Q 019298          126 NILLPR-PGFPIYELS-----------AAFRHIEVRHFDLLPDKGWEVDLDDIESLAD--QNTVALVIIN----PGNPCG  187 (343)
Q Consensus       126 ~vl~~~-p~~~~~~~~-----------~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--~~~~~i~~~~----p~nptG  187 (343)
                      +|++++ |.|..+...           ++..|.+++.++++.  ++.+|+++++++++  +++++|++++    |+||||
T Consensus       117 ~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~--~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg  194 (427)
T 3i16_A          117 TMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKE--DGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRAL  194 (427)
T ss_dssp             EEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCT--TSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCC
T ss_pred             EEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCcc--CCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcc
Confidence            999999 999887633           455688888887753  35689999999998  7899999999    999999


Q ss_pred             cccCHHHHHHHHHHHhh--cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCC-CcEEEEEEeCCCC
Q 019298          188 NVYSYQHLQKLAETANK--LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCG  264 (343)
Q Consensus       188 ~~~~~~~l~~l~~~~~~--~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~  264 (343)
                      .+   .++++|+++|++  +|+++++|++|+.+.+...+   . ..   +..++++|+||.++.+| .+.||++++    
T Consensus       195 ~i---~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p---~-~~---gaDiv~~S~sK~lgg~g~~~gG~i~~~----  260 (427)
T 3i16_A          195 LI---EDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEP---T-DV---GADLIAGSLIKNIGGGIAPTGGYLAGT----  260 (427)
T ss_dssp             CH---HHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCG---G-GG---TCSEEEEETTSGGGTTTCCSCEEEEEC----
T ss_pred             cH---HHHHHHHHHHHHhCCCCEEEEECCCccccccCCc---c-cc---CCeEEEecCcccCCCCCCceEEEEEEC----
Confidence            88   899999999999  99999999999987643221   1 11   23499999999998877 678999884    


Q ss_pred             CCCchHHHHHHhhhhc---cccCcch-HH-HHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298          265 MFRKPKVVERMKKYFD---ILGDPAT-FI-QVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN  330 (343)
Q Consensus       265 ~~~~~~~~~~l~~~~~---~~~~~~~-~~-~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~  330 (343)
                          ++++++++....   ......+ +. ..++    ++.....-.++++..+++..+.+.|+++ |+.+
T Consensus       261 ----~~li~~l~~~~~~~~~g~~~~~~~~~a~~~----l~gl~~~~~r~~~~~~~a~~la~~L~~~-g~~V  322 (427)
T 3i16_A          261 ----KDCIEKTSYRLTVPGIGGECGSTFGVVRSM----YQGLFLAPHISMEALKGAILCSRIMELA-GFEV  322 (427)
T ss_dssp             ----HHHHHHHHHHHSCTTTGGGCCCCTTCHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred             ----HHHHHHHHHhcccCccCccCCccHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCee
Confidence                478888887421   1111111 21 1122    1111222237788888999999999988 5666

>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}

Probab=99.92  E-value=3.7e-23  Score=191.19  Aligned_cols=241  Identities=17%  Similarity=0.114  Sum_probs=175.4

Q ss_pred             HHHHHHHHHHHhcC------CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE---ecChHHHHHHHHHHhcCCCC
Q 019298           55 HVATEAVAEALLSE------KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV---TSGCTQAIDVAMALLSRPGA  125 (343)
Q Consensus        55 ~~~~~~~~~~~~~~------~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~---~~g~~~al~~~~~~l~~~gd  125 (343)
                      +.+++++.+.....      ....|+.. |...|++.++++++        .+..++   ++|+++++..++.++++|||
T Consensus        47 ~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~-g~~~Le~~lA~l~g--------~e~alv~p~~~sGt~A~~~al~all~pGD  117 (427)
T 3hvy_A           47 LKVLKAFQEERISESHFTNSSGYGYNDI-GRDSLDRVYANIFN--------TESAFVRPHFVNGTHAIGAALFGNLRPND  117 (427)
T ss_dssp             HHHHHHHHHTTCCGGGSCCCCTTCTTCH-HHHHHHHHHHHHHT--------CSEEEEETTCCSHHHHHHHHHHHTCCTTC
T ss_pred             HHHHHHHHHHHHHHHhcccCcCCCCCch-hHHHHHHHHHHHhC--------CCceEEeCCCCcHHHHHHHHHHHhcCCCC
Confidence            67777777753321      12345543 67889999999983        455566   78889999999999999999


Q ss_pred             eEEEeC-CCCcchHH-----------HHHhcCceeEEeecCCCCCCCCCHHHHHhhhc--CCceEEEEeC----CCCCcc
Q 019298          126 NILLPR-PGFPIYEL-----------SAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD--QNTVALVIIN----PGNPCG  187 (343)
Q Consensus       126 ~vl~~~-p~~~~~~~-----------~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~--~~~~~i~~~~----p~nptG  187 (343)
                      +|++.+ |.|..+..           .++..|.+++.++.   +++.+|+++++++++  +++++|++++    |+||||
T Consensus       118 ~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~---~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg  194 (427)
T 3hvy_A          118 TMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL---KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSL  194 (427)
T ss_dssp             EEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC---BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCC
T ss_pred             EEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecC---CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccc
Confidence            999999 99988763           34557888888876   356799999999998  7899999999    999998


Q ss_pred             cccCHHHHHHHHHHHhh--cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCC-CcEEEEEEeCCCC
Q 019298          188 NVYSYQHLQKLAETANK--LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCG  264 (343)
Q Consensus       188 ~~~~~~~l~~l~~~~~~--~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~  264 (343)
                      .+   .++++|+++|++  +|+++++|++|+.+.+...+   . ..   +..++++|+||+++.+| .+.||++++    
T Consensus       195 ~v---~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~p---~-~~---gaDiv~~S~sK~lgg~g~~~GG~i~~~----  260 (427)
T 3hvy_A          195 RI---AEIAEIIKSIREVNENVIVFVDNCYGEFVEEKEP---T-DV---GADIIAGSLIKNIGGGIATTGGYIAGK----  260 (427)
T ss_dssp             CH---HHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSCG---G-GG---TCSEEEEETTSGGGTTTCCSCEEEEEC----
T ss_pred             cH---HHHHHHHHHHHHhCCCCEEEEECCccccccCCCC---c-cc---CCeEEEECCcccccccccceEEEEEEC----
Confidence            87   889999999999  89999999999887643221   1 11   23499999999988776 566888874    


Q ss_pred             CCCchHHHHHHhhhhc---cc--cCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298          265 MFRKPKVVERMKKYFD---IL--GDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN  330 (343)
Q Consensus       265 ~~~~~~~~~~l~~~~~---~~--~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~  330 (343)
                          ++++++++....   ..  ..++.....++ ...+   ...-.++++..++...+.+.|+++ |+.+
T Consensus       261 ----~~li~~l~~~~~~~~~g~~~~~~~~~a~~~-~~gl---~~~~~r~~~~~~~a~~la~~L~~~-g~~V  322 (427)
T 3hvy_A          261 ----EEYVTQATFRVTVPGIGGECGSTFGVMRSL-YEGL---FMAPHVTIEAVKGAVFCARIMELA-GFDV  322 (427)
T ss_dssp             ----HHHHHHHHHHHSCTTTGGGCCCCTTCHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred             ----HHHHHHHHHHhhcCCcccccCCCHHHHHHH-HHhH---hHHHHHHHHHHHHHHHHHHHHHhC-CCee
Confidence                478888877432   11  11111112222 1111   112227778888899999999988 5666

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}

Probab=99.91  E-value=3.1e-23  Score=195.60  Aligned_cols=286  Identities=14%  Similarity=0.098  Sum_probs=190.7

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++.++||+.|...  ..++ .+|.+.+++++++....  .+....+..+.++++++++.+.++  .+.++|++++|+++
T Consensus        52 ~G~~ylD~~s~~~~--~~lGh~~p~v~~A~~~~l~~~~--~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGse  125 (476)
T 3i5t_A           52 DGRRLIDGPAGMWC--AQVGYGRREIVDAMAHQAMVLP--YASPWYMATSPAARLAEKIATLTP--GDLNRIFFTTGGST  125 (476)
T ss_dssp             TCCEEEETTHHHHT--CTTCBCCHHHHHHHHHHHHHCC--CCCTTTCBCHHHHHHHHHHHTTSS--TTCCEEEEESSHHH
T ss_pred             CCCEEEECCCchhh--ccCCCCCHHHHHHHHHHHHhcc--CcccCccCCHHHHHHHHHHHhcCC--CCcCEEEEeCchHH
Confidence            37788999988533  2244 68999999999987532  122224567888999999987553  35679999999999


Q ss_pred             HHHHHHHHhcC--------CCCeEEEeCCCCcchHHHHHhcCce-------------eEEee--cCCCCCCCCC------
Q 019298          112 AIDVAMALLSR--------PGANILLPRPGFPIYELSAAFRHIE-------------VRHFD--LLPDKGWEVD------  162 (343)
Q Consensus       112 al~~~~~~l~~--------~gd~vl~~~p~~~~~~~~~~~~g~~-------------~~~~~--~~~~~~~~~d------  162 (343)
                      ++..+++.+..        .+++|++.+|+|+++...+...+..             +..++  ..... +..+      
T Consensus       126 A~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~  204 (476)
T 3i5t_A          126 AVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHA-GNRSQEAFLD  204 (476)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGC-TTSCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCccccc-CCCchHHHHH
Confidence            99999998853        3579999999999887666544322             11222  11111 1222      


Q ss_pred             --HHHHHhhhc----CCceEEEEeCCCCCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccc-ccCCC
Q 019298          163 --LDDIESLAD----QNTVALVIINPGNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG-VFGST  234 (343)
Q Consensus       163 --~~~l~~~~~----~~~~~i~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~-~~~~~  234 (343)
                        +++|++.+.    +++.+++++.++|++|. +++.+.+++|.++|++||+++|+||+|.++...+.. .... .++..
T Consensus       205 ~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~-~~~~~~~~v~  283 (476)
T 3i5t_A          205 DLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEW-FASEKVFGVV  283 (476)
T ss_dssp             HHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-CHHHHTTCCC
T ss_pred             HHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCc-eeeecccCCC
Confidence              678888775    34455555555788886 788899999999999999999999999998665542 1222 22222


Q ss_pred             CCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhh--------hccccCcchHHHHHHHhccchhhHHHH
Q 019298          235 VPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQVCIMYGCLSTIMQIM  305 (343)
Q Consensus       235 ~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~~l~~~~~~l  305 (343)
                      .+++   ++||+++. | +|+|+++++        +++++.+...        ...+++.++++++++ .++|+...+ -
T Consensus       284 pdi~---t~sK~l~~-G~~plg~v~~~--------~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa-~aaL~~~~~-~  349 (476)
T 3i5t_A          284 PDII---TFAKGVTS-GYVPLGGLAIS--------EAVLARISGENAKGSWFTNGYTYSNQPVACAAA-LANIELMER-E  349 (476)
T ss_dssp             CSEE---EECGGGGT-TSSCCEEEEEC--------HHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHH-HHHHHHHHH-T
T ss_pred             cchh---hhhhhhcC-CCcCeEEEEEC--------HHHHHHHhcCCcccccccccCCCCcCHHHHHHH-HHHHHHHHh-H
Confidence            2333   57899875 8 999999985        4788877653        223567788888888 555542211 1


Q ss_pred             HHHHHHHHHHHHHHHhhcCC---CCceeeCCCCceEeee
Q 019298          306 IHGNFLENFAGSCVPSYKLI---PELINFKSTGSSLKYL  341 (343)
Q Consensus       306 ~~~~~~~~~~~~~~~~L~~~---~g~~~~~~~~g~~~~~  341 (343)
                      +..++++++.+.+.+.|+.+   |.+....+.|. |+++
T Consensus       350 ~~~~~~~~~~~~l~~~L~~l~~~~~v~~v~~~G~-~~~i  387 (476)
T 3i5t_A          350 GIVDQAREMADYFAAALASLRDLPGVAETRSVGL-VGCV  387 (476)
T ss_dssp             THHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETT-EEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCc-eeEE
Confidence            15666667777776666543   44444344444 4444

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}

Probab=99.91  E-value=5.6e-23  Score=190.93  Aligned_cols=277  Identities=14%  Similarity=0.123  Sum_probs=168.8

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-----CCCCHHHHHHHH-HHHhhhCCCCCCCCcE-EEec
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP-----TAGLPLTRRAIA-EYLSRDLPYKLTPNDV-FVTS  107 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-----~~g~~~lr~~ia-~~~~~~~~~~~~~~~i-~~~~  107 (343)
                      .+.++|..+.      ...+|.+.+++.+++.+.....|+.     .....+..+.++ +.+.+.++    .+.+ ++++
T Consensus        32 ~~~i~l~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~----~~~~~v~~~  101 (425)
T 3ecd_A           32 QSQVELIASE------NIVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFN----AGHANVQPH  101 (425)
T ss_dssp             HHSEECCTTC------CCCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHT----CSEEECCCS
T ss_pred             hcceeeeccc------CCCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhC----CCCceeecC
Confidence            3568886665      1238999999998875322122221     111111222222 33333222    2334 4588


Q ss_pred             ChHHHHHHHHHHhcCCCCeEEEeCCCCcc---hHHHHHhcCcee--EEeecCCCCCCCCCHHHHHhhhc-CCceEEEEeC
Q 019298          108 GCTQAIDVAMALLSRPGANILLPRPGFPI---YELSAAFRHIEV--RHFDLLPDKGWEVDLDDIESLAD-QNTVALVIIN  181 (343)
Q Consensus       108 g~~~al~~~~~~l~~~gd~vl~~~p~~~~---~~~~~~~~g~~~--~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~  181 (343)
                      |+++++..++++++++||+|+++.|+|..   +.......|..+  +.++.++ +++.+|+++|++.++ ++++++++++
T Consensus       102 ~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~  180 (425)
T 3ecd_A          102 SGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSR-DTMLIDYDQVEALAQQHKPSLIIAGF  180 (425)
T ss_dssp             SHHHHHHHHHHHHCCTTCEEEEECC------------------CEEEEECCCT-TTSSCCHHHHHHHHHHHCCSEEEEEC
T ss_pred             chHHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCc-ccCccCHHHHHHHHhhcCCcEEEEcc
Confidence            88999999999999999999999999987   322222445543  4444432 457899999999986 5789999999


Q ss_pred             CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCC-ccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEe
Q 019298          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG-HLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT  260 (343)
Q Consensus       182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~  260 (343)
                      |+||+.     .++++|.++|++||+++|+||+|. ++.+.+.....+..     ..++++|+||++  +|.|+||++++
T Consensus       181 ~~~~~~-----~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~-----~di~~~s~sK~l--~g~~~g~~~~~  248 (425)
T 3ecd_A          181 SAYPRK-----LDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEH-----AHVVTSTTHKTL--RGPRGGFVLTN  248 (425)
T ss_dssp             SCCCSC-----CCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT-----CSEEEEESSGGG--CCCSCEEEEES
T ss_pred             ccCCCc-----CCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhc-----CcEEEecCCccc--CCCCcEEEEeC
Confidence            999753     446899999999999999999964 33444332222221     128899999996  67789999986


Q ss_pred             CCCCCCCchHHHHHHhhhhcc--ccCcchHHHHHHHhccchh-hHHH-HHHHHHHHHHHHHHHHhhcCCCCceeeCC-CC
Q 019298          261 DPCGMFRKPKVVERMKKYFDI--LGDPATFIQVCIMYGCLST-IMQI-MIHGNFLENFAGSCVPSYKLIPELINFKS-TG  335 (343)
Q Consensus       261 ~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~a~~~~~l~~-~~~~-l~~~~~~~~~~~~~~~~L~~~~g~~~~~~-~~  335 (343)
                      +       +++.+.+......  ...++.....++ ..++.. ..+. -+.+++++++++.+.+.|.+. |+.+..+ .+
T Consensus       249 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~  319 (425)
T 3ecd_A          249 D-------EEIAKKINSAVFPGLQGGPLMHVIAGK-AVAFGEALTDDFKTYIDRVLANAQALGDVLKAG-GVDLVTGGTD  319 (425)
T ss_dssp             C-------HHHHHHHHHHHC-----CCCHHHHHHH-HHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCS
T ss_pred             C-------HHHHHHHHhhhCccccCCccHHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC-CCeeccCCCC
Confidence            3       3566666655432  123334333333 222221 1223 347888889999999999886 7886543 57


Q ss_pred             ceEeeecC
Q 019298          336 SSLKYLDL  343 (343)
Q Consensus       336 g~~~~~~l  343 (343)
                      ++++|+++
T Consensus       320 ~~~~~~~~  327 (425)
T 3ecd_A          320 NHLLLVDL  327 (425)
T ss_dssp             SSEEEEEC
T ss_pred             ceEEEEEe
Confidence            88888753

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*

Probab=99.91  E-value=9.3e-24  Score=199.52  Aligned_cols=287  Identities=13%  Similarity=0.041  Sum_probs=189.2

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCCHHHHHHHHHHHhhhCCCCCCC--CcEEEe
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA------PTAGLPLTRRAIAEYLSRDLPYKLTP--NDVFVT  106 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~------~~~g~~~lr~~ia~~~~~~~~~~~~~--~~i~~~  106 (343)
                      .+.|+|..++      .++++.+++++.+.+.+....+|+      ...+..++++.+.+++.+.+|...+.  .+|+++
T Consensus        44 ~~~i~L~a~e------~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~  117 (483)
T 1rv3_A           44 RVGLELIASE------NFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPY  117 (483)
T ss_dssp             HSSEECCTTC------CCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCS
T ss_pred             hcCeEEEcCC------CCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEEC
Confidence            4578997765      246899999998887653222333      22234678877778887777754221  247888


Q ss_pred             cChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH--------HHHhcCceeEEeec--CCCCCCCCCHHHHHhhhc-CCce
Q 019298          107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYEL--------SAAFRHIEVRHFDL--LPDKGWEVDLDDIESLAD-QNTV  175 (343)
Q Consensus       107 ~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~--~~~~~~~~d~~~l~~~~~-~~~~  175 (343)
                      +|+ +++..++.++++|||+|++++|+|.++..        .+...|..++.+++  ++ +++.+|+++|++.++ .+++
T Consensus       118 sGs-~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~-~~~~iD~d~le~~i~~~~tk  195 (483)
T 1rv3_A          118 SGS-PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNP-DTGYIDYDRLEENARLFHPK  195 (483)
T ss_dssp             SHH-HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCS
T ss_pred             CcH-HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECcccc-CCCcCCHHHHHHHHhhcCCc
Confidence            887 88888889999999999999999877643        12333432444444  43 457899999999998 6899


Q ss_pred             EEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCC-ccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE
Q 019298          176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG-HLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL  254 (343)
Q Consensus       176 ~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~  254 (343)
                      +|++ +++|++ .+++   +++|.++|+++|+++|+|++|. ++.+.+....++.     ...+++.|+||++  .|+|.
T Consensus       196 lIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~-----~~div~~s~~K~l--~Gprg  263 (483)
T 1rv3_A          196 LIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE-----HCHVVTTTTHKTL--RGCRA  263 (483)
T ss_dssp             EEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG-----TCSEEEEESSGGG--CCCSC
T ss_pred             EEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC-----CCcEEEecCcccC--CCCCc
Confidence            9988 888888 7755   7888889999999999999987 3333332222221     1238899999985  68889


Q ss_pred             EEEEEeCCCCCCC-c------hHHHHHHhhhh-c-cccCcchHHHHHHHhccchhh--HHHHHHHHHHHHHHHHHHHhhc
Q 019298          255 GWFVTTDPCGMFR-K------PKVVERMKKYF-D-ILGDPATFIQVCIMYGCLSTI--MQIMIHGNFLENFAGSCVPSYK  323 (343)
Q Consensus       255 G~i~~~~~~~~~~-~------~~~~~~l~~~~-~-~~~~~~~~~~~a~~~~~l~~~--~~~l~~~~~~~~~~~~~~~~L~  323 (343)
                      ||++++++..... .      -++.+.+.... . ..+.++.....++ .+++...  ..+-+.++++.++++.+.+.|.
T Consensus       264 G~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal-~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~  342 (483)
T 1rv3_A          264 GMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGV-AVALKQAMTPEFKEYQRQVVANCRALSAALV  342 (483)
T ss_dssp             EEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHH-HHHHHHHTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHH-HHHHHHHhChhHHHHHHHHHHHHHHHHHHHH
Confidence            9999976421000 0      01333333221 1 1223334433333 3444322  2333488889999999999999


Q ss_pred             CCCCceeeCCC-CceEeeecC
Q 019298          324 LIPELINFKST-GSSLKYLDL  343 (343)
Q Consensus       324 ~~~g~~~~~~~-~g~~~~~~l  343 (343)
                      ++ |+.+..+. +.+++|+++
T Consensus       343 ~~-g~~~~~~~~~~~~~~v~~  362 (483)
T 1rv3_A          343 EL-GYKIVTGGSDNHLILVDL  362 (483)
T ss_dssp             HT-TCEEGGGSCSSSEEEEEG
T ss_pred             hc-CCEeccCCCCCceEEEec
Confidence            88 88865543 356777653

>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3

Probab=99.91  E-value=6.8e-23  Score=184.26  Aligned_cols=180  Identities=16%  Similarity=0.089  Sum_probs=143.1

Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH----HhcCceeEEeecCCC
Q 019298           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFDLLPD  156 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~~~~~  156 (343)
                      ++++.++++++      .+ +.+ +++++++++..+++++.++||+|+++.|+|..+...+    ...|.+++.++.   
T Consensus         2 ~l~~~la~~~g------~~-~~i-~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---   70 (331)
T 1pff_A            2 ALEGKIAKLEH------AE-ACA-ATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM---   70 (331)
T ss_dssp             HHHHHHHHHHT------CS-EEE-EESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT---
T ss_pred             hHHHHHHHHhC------CC-eEE-EeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC---
Confidence            68999999983      23 444 4545589999999999999999999999999876654    447888888764   


Q ss_pred             CCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhh-cCcEEEEccCCCccccCCCCCCcccccCCCC
Q 019298          157 KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK-LKTLVIADEVYGHLVFGDKPFVPMGVFGSTV  235 (343)
Q Consensus       157 ~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~-~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~  235 (343)
                          .|++++++.++++++++++++|+||||.+++   +++|.++|++ +|+++|+|++|..+.+..    +.    ..+
T Consensus        71 ----~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~~----~~----~~~  135 (331)
T 1pff_A           71 ----AVPGNIEKHLKPNTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILTN----PL----DLG  135 (331)
T ss_dssp             ----TSTTHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHCC----GG----GGT
T ss_pred             ----CCHHHHHHhhcCCCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccCC----hh----hcC
Confidence                3788999999888999999999999999985   7888999999 999999999999755421    11    124


Q ss_pred             CEEEEccCccccCCCCCc-EEEEEEeCCCCCCCchHHHHHHhhhhcc--ccCcchHHHHHH
Q 019298          236 PILTLGSLSKRWIVPGWR-LGWFVTTDPCGMFRKPKVVERMKKYFDI--LGDPATFIQVCI  293 (343)
Q Consensus       236 ~~i~~~S~sK~~~~~G~r-~G~i~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~a~  293 (343)
                      ++++++|+||.|+++|.| +||+++++       ++++++++.....  ....++..+.++
T Consensus       136 ~d~~~~s~~K~~~~~~~r~~G~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~  189 (331)
T 1pff_A          136 VDIVVHSATKYINGHTDVVAGLVCSRA-------DIIAKVKSQGIKDITGAIISPHDAWLI  189 (331)
T ss_dssp             CSEEEEETTTTTSSSSSCCCEEEEECH-------HHHHHHHHTCCCCCCCCCCCHHHHHHH
T ss_pred             CcEEEEECccccCCCCCceEEEEEeCc-------HHHHHHHHHHHHhhcCCCCCHHHHHHH
Confidence            569999999999999999 79998842       2688888776543  345677766654

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*

Probab=99.91  E-value=7.2e-23  Score=189.42  Aligned_cols=214  Identities=11%  Similarity=0.042  Sum_probs=156.7

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH----HhcCceeEEeec
Q 019298           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFDL  153 (343)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~~  153 (343)
                      ...++++.+|++++        .+++++++|+++++..++++++++||+|+++.+.|.+....+    +..|.++..++.
T Consensus        83 ~~~~le~~lA~l~g--------~~~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~  154 (415)
T 2fq6_A           83 THFSLQQAMCELEG--------GAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDP  154 (415)
T ss_dssp             HHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECT
T ss_pred             hHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECC
Confidence            45679999999883        346777889999999999999999999999999998776544    446888888754


Q ss_pred             CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhh--cCcEEEEccCCCccccCCCCCCccccc
Q 019298          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK--LKTLVIADEVYGHLVFGDKPFVPMGVF  231 (343)
Q Consensus       154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~--~~~~~i~D~ay~~~~~~~~~~~~~~~~  231 (343)
                      .       |++++++++++++++|++++|+||||.+++   +++|+++|++  +|+++|+|++|+.....    .++ . 
T Consensus       155 ~-------d~~~le~ai~~~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~~----~p~-~-  218 (415)
T 2fq6_A          155 L-------IGADIVKHLQPNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVLF----KAL-D-  218 (415)
T ss_dssp             T-------CGGGGGGGCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTSS----CGG-G-
T ss_pred             C-------CHHHHHHhhccCCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCcccccC----Ccc-c-
Confidence            2       789999999888999999999999999975   6788888999  99999999999864321    112 1 


Q ss_pred             CCCCCEEEEccCccccCCCCCc-EEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHHHHH
Q 019298          232 GSTVPILTLGSLSKRWIVPGWR-LGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGN  309 (343)
Q Consensus       232 ~~~~~~i~~~S~sK~~~~~G~r-~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~  309 (343)
                        .+..+++.|+||.++.+|.+ +||+++++        +++++++..... ....++....++ ...+   ..+..+.+
T Consensus       219 --~g~Div~~S~sK~lg~~g~~~~G~l~~~~--------~~~~~l~~~~~~~G~~~~~~~a~~~-~~~l---~~l~~r~~  284 (415)
T 2fq6_A          219 --FGIDVSIQAATKYLVGHSDAMIGTAVCNA--------RCWEQLRENAYLMGQMVDADTAYIT-SRGL---RTLGVRLR  284 (415)
T ss_dssp             --GTCSEEEEETTTTTTCSSSCCCEEEEECT--------TTHHHHHHHHHHTTCCCCHHHHHHH-HHHH---HHHHHHHH
T ss_pred             --cCCeEEEEeCccccCCCCCceEEEEEeCH--------HHHHHHHHHHHhcCCCCCHHHHHHH-Hhhh---hHHHHHHH
Confidence              23459999999999998865 58888753        345555544321 223344433333 1111   22223666


Q ss_pred             HHHHHHHHHHHhhcCCCCce
Q 019298          310 FLENFAGSCVPSYKLIPELI  329 (343)
Q Consensus       310 ~~~~~~~~~~~~L~~~~g~~  329 (343)
                      +..++...+.+.|++.|++.
T Consensus       285 ~~~~n~~~l~~~L~~~~~v~  304 (415)
T 2fq6_A          285 QHHESSLKVAEWLAEHPQVA  304 (415)
T ss_dssp             HHHHHHHHHHHHHHTCTTEE
T ss_pred             HHHHHHHHHHHHHHcCCCee
Confidence            67778888888887765554

>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*

Probab=99.91  E-value=4.9e-24  Score=194.12  Aligned_cols=254  Identities=11%  Similarity=0.029  Sum_probs=173.0

Q ss_pred             ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC--------CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-c-EEE
Q 019298           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--------FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-D-VFV  105 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~-i~~  105 (343)
                      +++.++.|.      .++++.+++++.+.+.+..        ...|.+  +..++++++.+.+.+.+|.  +++ + +++
T Consensus         4 ~~~l~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~la~~~g~--~~~~~~i~~   73 (362)
T 2c0r_A            4 RAYNFNAGP------AALPLEVLERAQAEFVDYQHTGMSIMEMSHRGA--VYEAVHNEAQARLLALLGN--PTGYKVLFI   73 (362)
T ss_dssp             CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSH--HHHHHHHHHHHHHHHHTTC--CSSEEEEEE
T ss_pred             ceeeccCCC------CCCCHHHHHHHHHHHhhhhhcCccccccCCCcH--HHHHHHHHHHHHHHHHhCC--CCCcEEEEE
Confidence            345566553      5788999999998875310        111211  2345666777777666654  443 6 467


Q ss_pred             ecChHHHHHHHHHHhcCCCCeEEEeCCCCcch--HHHHHhcCceeEEeecCCC--CCCCCCHHHHHhhhcCCceEEEEeC
Q 019298          106 TSGCTQAIDVAMALLSRPGANILLPRPGFPIY--ELSAAFRHIEVRHFDLLPD--KGWEVDLDDIESLADQNTVALVIIN  181 (343)
Q Consensus       106 ~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~i~~~~  181 (343)
                      |+|+++++..++.+++++||+|+++.+.+...  ...++..| +++.++++.+  .+..+|.++++  ++++++++++++
T Consensus        74 t~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~~t~~v~~~~  150 (362)
T 2c0r_A           74 QGGASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQDNAAYLHLTS  150 (362)
T ss_dssp             SSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCTTEEEEEEES
T ss_pred             CCCchHHHHHHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cCCCcCEEEEeC
Confidence            89999999999999999999999887765442  35667779 9998887632  22234666553  566889999999


Q ss_pred             CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (343)
Q Consensus       182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~  261 (343)
                      |+||||..++  ++++|      +|+++|+|++|..+..    +..+..+     .+++.|+||.||++|  +||++++.
T Consensus       151 ~~n~tG~~~~--~l~~i------~~~~vivD~a~~~~~~----~~~~~~~-----d~~~~s~~K~~g~~G--~G~l~~~~  211 (362)
T 2c0r_A          151 NETIEGAQFK--AFPDT------GSVPLIGDMSSDILSR----PFDLNQF-----GLVYAGAQKNLGPSG--VTVVIVRE  211 (362)
T ss_dssp             EETTTTEECS--SCCCC------TTSCEEEECTTTTTSS----CCCGGGC-----SEEEEETTTTTCCSS--CEEEEEEG
T ss_pred             CcCccceecc--ccccc------CCCEEEEEChhhccCC----ccchhHC-----cEEEEeccccccCcC--cEEEEEcH
Confidence            9999999754  35554      7999999999987431    1122221     378889999999888  99999865


Q ss_pred             CCCCCCchHHHHHHhh-------------hhccccCcchHHHHHHHhccchhhHH---HHHHHHHHHHHHHHHHHhhcCC
Q 019298          262 PCGMFRKPKVVERMKK-------------YFDILGDPATFIQVCIMYGCLSTIMQ---IMIHGNFLENFAGSCVPSYKLI  325 (343)
Q Consensus       262 ~~~~~~~~~~~~~l~~-------------~~~~~~~~~~~~~~a~~~~~l~~~~~---~l~~~~~~~~~~~~~~~~L~~~  325 (343)
                      +        ++++++.             .....++++...+.++ .++|+...+   +-+.+++++++++.+.+.|+++
T Consensus       212 ~--------~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~-~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  282 (362)
T 2c0r_A          212 D--------LVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMV-NEVLKWIEERGGLEGVQQANRKKASLIYDAIDQS  282 (362)
T ss_dssp             G--------GSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHH-HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred             H--------HHhhccccCchHHhHHHHhhccCcCCCchHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHc
Confidence            2        2222221             0112346677777777 666654322   3348889999999999999988


Q ss_pred             CCc-ee
Q 019298          326 PEL-IN  330 (343)
Q Consensus       326 ~g~-~~  330 (343)
                      +++ .+
T Consensus       283 ~~~~~~  288 (362)
T 2c0r_A          283 GGFYRG  288 (362)
T ss_dssp             TTSSEE
T ss_pred             CCcccc
Confidence            546 64

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*

Probab=99.91  E-value=1.1e-22  Score=189.45  Aligned_cols=217  Identities=14%  Similarity=0.106  Sum_probs=159.6

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH----HHhcCceeEEeecC
Q 019298           79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFDLL  154 (343)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~~~  154 (343)
                      ..++++.++++++      .. +.+++++| ++++..++++++++||+|+++.|+|.++...    ++..|.+++.++.+
T Consensus       116 ~~~l~~~lA~l~g------~~-~~v~~~sG-~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~  187 (445)
T 1qgn_A          116 TVVLEEKISALEG------AE-STLLMASG-MCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPA  187 (445)
T ss_dssp             HHHHHHHHHHHHT------CS-EEEEESCH-HHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSS
T ss_pred             HHHHHHHHHHHhC------CC-cEEEeCCH-HHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC
Confidence            4589999999883      22 44555554 5999999999999999999999999876664    45678888888652


Q ss_pred             CCCCCCCCHHHHHhhhcCCc-eEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298          155 PDKGWEVDLDDIESLADQNT-VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (343)
Q Consensus       155 ~~~~~~~d~~~l~~~~~~~~-~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~  233 (343)
                             |++++++++++++ ++|++++|+||||.+.+   +++|+++|+++|+++|+|++|......    .+.    .
T Consensus       188 -------d~~~l~~ai~~~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~----~~~----~  249 (445)
T 1qgn_A          188 -------DVGALELALNQKKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQ----KAL----A  249 (445)
T ss_dssp             -------CHHHHHHHHHHSCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC----CTT----T
T ss_pred             -------CHHHHHHHhccCCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC----Ccc----c
Confidence                   7999999998888 99999999999999975   678888999999999999999864321    111    1


Q ss_pred             CCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHHHHHHH
Q 019298          234 TVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGNFL  311 (343)
Q Consensus       234 ~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~  311 (343)
                      .+..++++|+||.++..| .++||++++        ++++++++..... ....+++...++ ...+   ..+..+.++.
T Consensus       250 ~g~Div~~S~sK~~gg~gd~~~G~l~~~--------~~l~~~l~~~~~~~g~~~~~~~a~~~-~~~l---~~l~~r~~~~  317 (445)
T 1qgn_A          250 LGADLVLHSATKFLGGHNDVLAGCISGP--------LKLVSEIRNLHHILGGALNPNAAYLI-IRGM---KTLHLRVQQQ  317 (445)
T ss_dssp             TTCSEEEECTTTTTTCSSSCCCEEEEEC--------HHHHHHHHHHHHHHCCCCCHHHHHHH-HHHG---GGHHHHHHHH
T ss_pred             cCCEEEEECCcccccccccceEEEEEEC--------HHHHHHHHHHHHHhCCCCCHHHHHHH-HHhH---HHHHHHHHHH
Confidence            234599999999998776 579999984        3677777655432 233455544433 2222   2222355667


Q ss_pred             HHHHHHHHHhhcCCCCce-eeCC
Q 019298          312 ENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       312 ~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      .+++..+.+.|+++|++. +..|
T Consensus       318 ~~~a~~l~~~L~~~p~v~~v~~p  340 (445)
T 1qgn_A          318 NSTALRMAEILEAHPKVRHVYYP  340 (445)
T ss_dssp             HHHHHHHHHHHHTCTTEEEEECT
T ss_pred             HHHHHHHHHHHhcCCCceEEECC
Confidence            777888999999888873 5444

>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}

Probab=99.91  E-value=2e-23  Score=194.53  Aligned_cols=284  Identities=15%  Similarity=0.059  Sum_probs=171.4

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++.++||+.+...  +.++ .+|.+.+++.+++.......|+. ....++++.+++++    +   .++++++++|+++
T Consensus        51 ~g~~ylD~~~~~~~--~~lG~~~p~v~~A~~~~~~~~~~~~~~~-~~~~~la~~l~~~~----~---~~~~v~~~~sGse  120 (429)
T 4e77_A           51 DGKAYIDYVGSWGP--MILGHNHPAIRQAVIEAVERGLSFGAPT-EMEVKMAQLVTDLV----P---TMDMVRMVNSGTE  120 (429)
T ss_dssp             TCCEEEESSGGGTT--CTTCBTCHHHHHHHHHHHTTCSCCSSCC-HHHHHHHHHHHHHS----T---TCSEEEEESSHHH
T ss_pred             CCCEEEECCCchhc--cccCCCCHHHHHHHHHHHHhCcccCCCC-HHHHHHHHHHHhhC----C---CCCEEEEeCcHHH
Confidence            37788999988744  2244 68999999999987643333432 23345555555554    2   5789999999999


Q ss_pred             HHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHh-cCceeEEeecCCCCCC------------CCCHHHHHhhhcC--Cc
Q 019298          112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAF-RHIEVRHFDLLPDKGW------------EVDLDDIESLADQ--NT  174 (343)
Q Consensus       112 al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~------------~~d~~~l~~~~~~--~~  174 (343)
                      ++..+++...  ..++.|++.+++|+++...+.. .+.....+......+.            .-|+++|++.++.  +.
T Consensus       121 a~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~  200 (429)
T 4e77_A          121 ATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQE  200 (429)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTT
T ss_pred             HHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCC
Confidence            9999998643  2567899999999876542211 1111000000000000            0178999998864  34


Q ss_pred             eEEEEeCCCCCc-cccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCC
Q 019298          175 VALVIINPGNPC-GNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW  252 (343)
Q Consensus       175 ~~i~~~~p~npt-G~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~  252 (343)
                      .++++++|+|++ |... +.+.+++|.++|++||+++|+||+|.++ ..+.. .....++...+   +.|+||.++ +|+
T Consensus       201 ~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~-~~~~~~~~~pd---i~t~sK~~~-~G~  274 (429)
T 4e77_A          201 VACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALA-GAQDYYHVIPD---LTCLGKIIG-GGM  274 (429)
T ss_dssp             EEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTT-CHHHHTTCCCS---EEEEEGGGG-TTS
T ss_pred             EEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcc-hHHHhcCCCCC---eeeeccccc-CCC
Confidence            566778886554 4443 3556999999999999999999999987 43331 12222222222   248899998 799


Q ss_pred             cEEEEEEeCCCCCCCchHHHHHHhhh----hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC----
Q 019298          253 RLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL----  324 (343)
Q Consensus       253 r~G~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~----  324 (343)
                      |+||++++        +++++.+...    ...+++.++++++++ .++|+...+ -+..++++++++.+.+.|++    
T Consensus       275 ~~G~~~~~--------~~~~~~l~~~~~~~~~~t~~~~~~~~aaa-~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~  344 (429)
T 4e77_A          275 PVGAFGGR--------REVMNALAPTGPVYQAGTLSGNPIAMAAG-FACLTEISQ-VGVYETLTELTDSLATGLRHAAKE  344 (429)
T ss_dssp             CCEEEEEC--------HHHHTTBTTTSSBCC--CCCCCHHHHHHH-HHHHHHHTS-TTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEC--------HHHHHHhccCCCccccCCCCCCHHHHHHH-HHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999884        4677766642    223457788888877 555442100 11445555555555555543    


Q ss_pred             CCCceeeCCCCceEeeecC
Q 019298          325 IPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       325 ~~g~~~~~~~~g~~~~~~l  343 (343)
                      + ++....+..|+|+|+++
T Consensus       345 ~-~~~~~~~~~g~~~~~~~  362 (429)
T 4e77_A          345 E-NIPLVVNHVGGMFGLFF  362 (429)
T ss_dssp             T-TCCCEEEEETTEEEEEC
T ss_pred             C-CCceEEEEeeeEEEEEE
Confidence            3 33322344577777653

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}

Probab=99.91  E-value=9.9e-23  Score=191.86  Aligned_cols=286  Identities=15%  Similarity=0.087  Sum_probs=185.8

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      ++++++||+.|...  +.++ .+|.+.++++++++.... .|....+..+.+.++++.+.+..  +.+.++|++++|+++
T Consensus        53 ~G~~ylD~~s~~~~--~~lGh~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~lae~l~~~~--~~~~~~v~~~~sGse  127 (472)
T 3hmu_A           53 EGEEILDAMAGLWC--VNIGYGRDELAEVAARQMRELPY-YNTFFKTTHVPAIALAQKLAELA--PGDLNHVFFAGGGSE  127 (472)
T ss_dssp             TCCEEECTTHHHHT--CTTCBCCHHHHHHHHHHHHHCSC-CCSSSSEECHHHHHHHHHHHHHS--CTTEEEEEEESSHHH
T ss_pred             CCCEEEECCCchhh--ccCCCCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHHhC--CCCCCEEEEeCCHHH
Confidence            37789999888532  2244 589999999999875321 23333334456666666665543  345679999999999


Q ss_pred             HHHHHHHHhcC--------CCCeEEEeCCCCcchHHHHHhcCc------------eeEEeecCC--C-CCCCCC------
Q 019298          112 AIDVAMALLSR--------PGANILLPRPGFPIYELSAAFRHI------------EVRHFDLLP--D-KGWEVD------  162 (343)
Q Consensus       112 al~~~~~~l~~--------~gd~vl~~~p~~~~~~~~~~~~g~------------~~~~~~~~~--~-~~~~~d------  162 (343)
                      ++..+++.+..        ++++|++.+|+|.++...+...+.            .+..++...  . +++ .|      
T Consensus       128 A~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~  206 (472)
T 3hmu_A          128 ANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGL  206 (472)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHH
Confidence            99999998864        468999999999988766555443            233333211  0 111 33      


Q ss_pred             --HHHHHhhhcC---CceEEEEeCC-CCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCC
Q 019298          163 --LDDIESLADQ---NTVALVIINP-GNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV  235 (343)
Q Consensus       163 --~~~l~~~~~~---~~~~i~~~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~  235 (343)
                        +++|++.+..   +..++++++| +|++|.+. +.+.+++|.++|++||+++|+||+|.++...+.. .....++...
T Consensus       207 ~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~-~a~~~~~v~p  285 (472)
T 3hmu_A          207 ARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNW-FGTQTMGIRP  285 (472)
T ss_dssp             HHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-CHHHHHTCCC
T ss_pred             HHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCcc-chhHHhCCCC
Confidence              7788887752   3345555555 67778765 8889999999999999999999999998665532 1222222222


Q ss_pred             CEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh---hccccCcchHHHHHHHhccchhhHHHHHHHHHHH
Q 019298          236 PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY---FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLE  312 (343)
Q Consensus       236 ~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~  312 (343)
                      +++   +|||+++..|+|+||++++        +++++.+...   ...+++.++++++++ .++|+...+ -+..++++
T Consensus       286 di~---t~sK~l~gg~~plG~v~~~--------~~i~~~~~~~~~~~~~t~~~np~a~aAa-~aaL~~~~~-~~~~~~~~  352 (472)
T 3hmu_A          286 HIM---TIAKGLSSGYAPIGGSIVC--------DEVAHVIGKDEFNHGYTYSGHPVAAAVA-LENLRILEE-ENILDHVR  352 (472)
T ss_dssp             SEE---EECGGGTTTSSCCEEEEEE--------HHHHHHHTTSCBCCCCTTTTCHHHHHHH-HHHHHHHHH-TTHHHHHH
T ss_pred             cee---eechhhhcCCcceEEEEEC--------HHHHHhcccCCccccCCCCCCHHHHHHH-HHHHHHHHH-hHHHHHHH
Confidence            333   5789988777999999995        4788888321   223567788888888 555542111 11555566


Q ss_pred             -HHHHHHHHhhcC---CCCceeeCCCCceE
Q 019298          313 -NFAGSCVPSYKL---IPELINFKSTGSSL  338 (343)
Q Consensus       313 -~~~~~~~~~L~~---~~g~~~~~~~~g~~  338 (343)
                       ++.+.+.+.|+.   +|++....+.|.++
T Consensus       353 ~~~~~~l~~~L~~l~~~~~v~~vr~~G~~~  382 (472)
T 3hmu_A          353 NVAAPYLKEKWEALTDHPLVGEAKIVGMMA  382 (472)
T ss_dssp             HTHHHHHHHHHHGGGGSTTEEEEEEETTEE
T ss_pred             HHHHHHHHHHHHHHhcCCCeEEEEecCceE
Confidence             666666655544   45454434444443

>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*

Probab=99.91  E-value=1.2e-22  Score=187.28  Aligned_cols=219  Identities=15%  Similarity=0.081  Sum_probs=161.3

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHH-----hcCceeEEee
Q 019298           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA-----FRHIEVRHFD  152 (343)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~-----~~g~~~~~~~  152 (343)
                      ...+|++.++++..        .+++++++++++++.. +..++++||+|+++.|+|......+.     ..|.+++.++
T Consensus        68 ~~~~l~~~la~l~g--------~~~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~  138 (400)
T 3nmy_A           68 TRFAYERCVAALEG--------GTRAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVD  138 (400)
T ss_dssp             HHHHHHHHHHHHHT--------CSEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEEC
T ss_pred             HHHHHHHHHHHHhC--------CCCEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEEC
Confidence            44678888888872        3467777777999998 56688999999999999986555433     3588888886


Q ss_pred             cCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298          153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (343)
Q Consensus       153 ~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~  232 (343)
                      ..       |++++++++++++++|++++|+||||.+++   +++|+++|++||+++|+|++|+...+..    +. .+ 
T Consensus       139 ~~-------d~~~l~~~i~~~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~----~~-~~-  202 (400)
T 3nmy_A          139 LT-------DPAAFKAAIRADTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQR----PL-SL-  202 (400)
T ss_dssp             TT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCC----GG-GG-
T ss_pred             CC-------CHHHHHHHhccCCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccCC----hh-hc-
Confidence            52       789999999989999999999999999985   7888899999999999999998543221    11 11 


Q ss_pred             CCCCEEEEccCccccCCCCCcEEE-EEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHHHHHH
Q 019298          233 STVPILTLGSLSKRWIVPGWRLGW-FVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGNF  310 (343)
Q Consensus       233 ~~~~~i~~~S~sK~~~~~G~r~G~-i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~  310 (343)
                        +..+++.|+||.++.+|.++|+ +++..      ++++.++++..... ....++....++ ...+   ..+..+.++
T Consensus       203 --g~div~~S~sK~l~g~g~~~gG~~vv~~------~~~~~~~l~~~~~~~g~~~~~~~a~~~-l~~l---~~l~~r~~~  270 (400)
T 3nmy_A          203 --GADLVVHSATKYLNGHSDMVGGIAVVGD------NAELAEQMAFLQNSIGGVQGPFDSFLA-LRGL---KTLPLRMRA  270 (400)
T ss_dssp             --TCSEEEEETTTTTTCSSSCCCEEEEECS------CHHHHHHHHHHHHHHCCBCCHHHHHHH-HHHH---TTHHHHHHH
T ss_pred             --CCcEEEecCccccCCCCCcceeEEEEeC------CHHHHHHHHHHHHhcCCCCCHHHHHHH-HHhH---hHHHHHHHH
Confidence              3459999999999999988877 44322      24677877766432 345566655554 2222   222236677


Q ss_pred             HHHHHHHHHHhhcCCCCce-eeCC
Q 019298          311 LENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       311 ~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      ..++...+.+.|++.|.+. +..|
T Consensus       271 ~~~~a~~l~~~L~~~p~v~~V~~p  294 (400)
T 3nmy_A          271 HCENALALAQWLETHPAIEKVIYP  294 (400)
T ss_dssp             HHHHHHHHHHHHTTCTTEEEEECT
T ss_pred             HHHHHHHHHHHHHcCCCEeEEECC
Confidence            7888888999999887776 5444

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*

Probab=99.91  E-value=2.3e-23  Score=194.05  Aligned_cols=282  Identities=13%  Similarity=0.037  Sum_probs=176.5

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      ++.++||+.|.+.  +.++ .+|.+.+++.+++.......|     ..++++++++++.+.++   .+++|++++|++++
T Consensus        51 g~~~lD~~~~~~~--~~lG~~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~la~~l~~~~~---~~~~v~~~~ggsea  120 (427)
T 3fq8_A           51 GNRYIDYVGTWGP--AICGHAHPEVIEALKVAMEKGTSFGA-----PCALENVLAEMVNDAVP---SIEMVRFVNSGTEA  120 (427)
T ss_dssp             SCEEEESSGGGTT--CTTCBTCHHHHHHHHHHHTTCSCCSS-----CCHHHHHHHHHHHHHST---TCSEEEEESSHHHH
T ss_pred             CCEEEECCCchhh--hccCCCCHHHHHHHHHHHHhCCCcCC-----CCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHH
Confidence            7789999998754  2244 689999999999876432223     23566667776666554   57899999999999


Q ss_pred             HHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhc-CceeEEeecCCCCCCC------------CCHHHHHhhhcC---Cc
Q 019298          113 IDVAMALLS--RPGANILLPRPGFPIYELSAAFR-HIEVRHFDLLPDKGWE------------VDLDDIESLADQ---NT  174 (343)
Q Consensus       113 l~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~------------~d~~~l~~~~~~---~~  174 (343)
                      +..+++...  ..+++|++.+|+|+++...+... +.....+......++.            -|+++|++.+++   ++
T Consensus       121 ~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~  200 (427)
T 3fq8_A          121 CMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFAENPGEI  200 (427)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETTCHHHHHHHHHHSTTTE
T ss_pred             HHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCCCHHHHHHHHHhCCCCE
Confidence            999995432  23478999999997654332222 1111100000000000            178999998865   44


Q ss_pred             eEEEEeCCCCCcccccC-HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCc
Q 019298          175 VALVIINPGNPCGNVYS-YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWR  253 (343)
Q Consensus       175 ~~i~~~~p~nptG~~~~-~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r  253 (343)
                      ++++++.++|++|.+.+ .+.+++|.++|++||+++|+||+|.++ ..+.. .....++...+   +.|+||+|+ +|+|
T Consensus       201 ~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~-~~~~~~~~~~d---i~t~sK~~~-~G~~  274 (427)
T 3fq8_A          201 AGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYG-GVQEKFGVTPD---LTTLGKIIG-GGLP  274 (427)
T ss_dssp             EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTT-HHHHHTTCCCS---EEEECGGGG-TTSS
T ss_pred             EEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcc-hhhHhcCCCCC---hhhhhhhhh-CCcc
Confidence            45555444677887765 566999999999999999999999987 44331 11111221112   358899998 7999


Q ss_pred             EEEEEEeCCCCCCCchHHHHHHhhh----hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC----C
Q 019298          254 LGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL----I  325 (343)
Q Consensus       254 ~G~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~----~  325 (343)
                      +||++++        +++++.+...    ...+++.++++++++ .++|+...+ -+..++++++++.+.+.|++    +
T Consensus       275 ~G~~~~~--------~~~~~~~~~~~~~~~~~t~~~~~~~~aa~-~aal~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~  344 (427)
T 3fq8_A          275 VGAYGGK--------REIMQLVAPAGPMYQAGTLSGNPLAMTAG-IKTLELLRQ-PGTYEYLDQITKRLSDGLLAIAQET  344 (427)
T ss_dssp             CEEEEEC--------HHHHTTBTTTSSBCCCCTTTTCHHHHHHH-HHHHHHHTS-TTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             eEEEEEc--------HHHHHhhccCCCccccCCCCcCHHHHHHH-HHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            9999884        4677776642    222446688888877 455432111 11455555555555555543    3


Q ss_pred             CCceeeCCCCceEeeec
Q 019298          326 PELINFKSTGSSLKYLD  342 (343)
Q Consensus       326 ~g~~~~~~~~g~~~~~~  342 (343)
                       ++....+..|+++|++
T Consensus       345 -~~~~~~~~~g~~~~~~  360 (427)
T 3fq8_A          345 -GHAACGGQVSGMFGFF  360 (427)
T ss_dssp             -TCCCEEEEETTEEEEE
T ss_pred             -CCCeEEEEeeeEEEEE
Confidence             2322233456666654

>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*

Probab=99.91  E-value=5.8e-23  Score=193.78  Aligned_cols=263  Identities=14%  Similarity=0.073  Sum_probs=184.9

Q ss_pred             ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC---CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP---TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      ..+.|+ +..     ....|.+.+++.+.+.  ..+.|.+   ..|..++++++++++.+.+|...   .+++++|++++
T Consensus        67 ~~~~lg-~~~-----~~~~p~v~~~~~~~~~--~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~---~~~~~~ggt~a  135 (474)
T 1wyu_B           67 TFYPLG-SCT-----MKYNPKLHEEAARLFA--DLHPYQDPRTAQGALRLMWELGEYLKALTGMDA---ITLEPAAGAHG  135 (474)
T ss_dssp             SCCCBT-TTC-----CCCCCHHHHHHHHTTS--SCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE---EECCCSSHHHH
T ss_pred             Cccccc-ccc-----ccCCHHHHHHHHHHHH--hcCCCCchhhChHHHHHHHHHHHHHHHHHCCCc---eeecChHHHHH
Confidence            456676 431     1234566666655422  2334443   45667888888888877666432   46678999999


Q ss_pred             HHHHHHHh----cCCCC-----eEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCC
Q 019298          113 IDVAMALL----SRPGA-----NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG  183 (343)
Q Consensus       113 l~~~~~~l----~~~gd-----~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~  183 (343)
                      +..++.++    .++||     +|+++.|+|+.+...+...|.+++.++++  .++.+|+++|++++++++++|++++| 
T Consensus       136 ~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~--~~~~~d~~~L~~~i~~~t~~v~~~~p-  212 (474)
T 1wyu_B          136 ELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSG--PEGEVDLEALKRELGPHVAALMLTNP-  212 (474)
T ss_dssp             HHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBC--TTSSBCHHHHHHHCSTTEEEEEECSS-
T ss_pred             HHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCC--CCCCcCHHHHHHhhCCCceEEEEECC-
Confidence            98766554    35787     99999999999999999999999999875  35679999999999888999999998 


Q ss_pred             CCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCC-C---CcEEEEEE
Q 019298          184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVP-G---WRLGWFVT  259 (343)
Q Consensus       184 nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~-G---~r~G~i~~  259 (343)
                      ||||.+.  +++++|+++|+++|+++|+|++|..+.++..   ....+   +..+++.|+||+|+.+ |   .|+||+++
T Consensus       213 n~~G~~~--~~l~~i~~l~~~~g~~li~Dea~~~~~~g~~---~~~~~---g~di~~~s~~K~~~~p~g~gG~~~G~~~~  284 (474)
T 1wyu_B          213 NTLGLFE--RRILEISRLCKEAGVQLYYDGANLNAIMGWA---RPGDM---GFDVVHLNLHKTFTVPHGGGGPGSGPVGV  284 (474)
T ss_dssp             CTTSCCC--TTHHHHHHHHHHHTCEEEEEGGGGGGTTTTC---CHHHH---TCSEEECCTTTTTCCCCTTSCCCCCCEEE
T ss_pred             CCCcccC--CCHHHHHHHHHHcCCEEEEeCchhhhhccCC---CcccC---CCcEEEEeCccccccCCCCCCCCeEEEEE
Confidence            6899873  4689999999999999999999987654311   11222   2458899999999876 4   69999999


Q ss_pred             eCCCCCCCchHHHHHHhh-h-------------------hccccCcchHHHHHHHhccchh-hHHHHH-HHHHHHHHHHH
Q 019298          260 TDPCGMFRKPKVVERMKK-Y-------------------FDILGDPATFIQVCIMYGCLST-IMQIMI-HGNFLENFAGS  317 (343)
Q Consensus       260 ~~~~~~~~~~~~~~~l~~-~-------------------~~~~~~~~~~~~~a~~~~~l~~-~~~~l~-~~~~~~~~~~~  317 (343)
                      ++        ++++.+.. .                   .....+.+..++.++ ...+.. ..+.++ ..+++.+++++
T Consensus       285 ~~--------~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa-~~~l~~~g~~~l~~~~~~~~~~~~~  355 (474)
T 1wyu_B          285 KA--------HLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRA-WAYIRTLGLEGLKKAAALAVLNARY  355 (474)
T ss_dssp             CG--------GGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cH--------HHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            64        34444431 0                   001123455556555 344432 123333 68888899999


Q ss_pred             HHHhhcCCCCcee
Q 019298          318 CVPSYKLIPELIN  330 (343)
Q Consensus       318 ~~~~L~~~~g~~~  330 (343)
                      +.+.|+++ |+.+
T Consensus       356 l~~~L~~~-g~~~  367 (474)
T 1wyu_B          356 LKELLKEK-GYRV  367 (474)
T ss_dssp             HHHHHHHT-TCBC
T ss_pred             HHHHHhhc-CcEe
Confidence            99999887 7776

>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*

Probab=99.90  E-value=7.2e-23  Score=192.77  Aligned_cols=277  Identities=10%  Similarity=0.058  Sum_probs=181.0

Q ss_pred             ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc----C---CCCCCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLS----E---KFNGYAP-TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~Y~~-~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~  107 (343)
                      +.+.|+.+...     +.++.+.+++.+++..    +   ....|.+ ..-...+++.+++++      +.++++|++|+
T Consensus        67 ~~iyld~~~~g-----~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~t~  135 (465)
T 3e9k_A           67 NAIYFLGNSLG-----LQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIV------GANEKEIALMN  135 (465)
T ss_dssp             BCEECBTTTSC-----CEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHH------TCCGGGEEECS
T ss_pred             CeEEecCCccC-----CChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHc------CCCcCCEEEEC
Confidence            56677766521     2344555555444421    1   1112222 123466888888887      45789999999


Q ss_pred             ChHHHHHHHHHHhcCCCC---eEEEeCCCCcchH----HHHHhcCceeEE--eecC-CCCCCCCCHHHHHhhhc---CCc
Q 019298          108 GCTQAIDVAMALLSRPGA---NILLPRPGFPIYE----LSAAFRHIEVRH--FDLL-PDKGWEVDLDDIESLAD---QNT  174 (343)
Q Consensus       108 g~~~al~~~~~~l~~~gd---~vl~~~p~~~~~~----~~~~~~g~~~~~--~~~~-~~~~~~~d~~~l~~~~~---~~~  174 (343)
                      |+++++..+++++.++|+   +|+++.|+|++..    ..++..|.++..  +.+. .++++.+|+++++++++   +++
T Consensus       136 g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~  215 (465)
T 3e9k_A          136 ALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGDSI  215 (465)
T ss_dssp             CHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGGGE
T ss_pred             CHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCCCe
Confidence            999999999999987665   4999999998743    356667877532  1111 22456789999999986   578


Q ss_pred             eEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE
Q 019298          175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL  254 (343)
Q Consensus       175 ~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~  254 (343)
                      +++++++|+||||.+++   +++|.++|++||+++|+|++|+...    .+..+...   +..++++|++|.+.+...++
T Consensus       216 ~lv~~~~~~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~g~----~~~~~~~~---~~D~~~~s~~K~l~~gp~~~  285 (465)
T 3e9k_A          216 AVILFSGVHFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAVGN----VELYLHDW---GVDFACWCSYKYLNAGAGGI  285 (465)
T ss_dssp             EEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTT----SCCCHHHH---TCCEEEECSSSTTCCCTTCC
T ss_pred             EEEEEeCcccCcceeec---HHHHHHHHHHcCCEEEEEhhhhcCC----cCCchhhc---CCCEEEECcccccccCCCce
Confidence            89999999999999977   5778888999999999999998522    11122222   23489999999984333368


Q ss_pred             EEEEEeCCCCCCCchHHHHHHhhhh-------------------------c-cccCcchHHHHHHHhccchhhHHH-H-H
Q 019298          255 GWFVTTDPCGMFRKPKVVERMKKYF-------------------------D-ILGDPATFIQVCIMYGCLSTIMQI-M-I  306 (343)
Q Consensus       255 G~i~~~~~~~~~~~~~~~~~l~~~~-------------------------~-~~~~~~~~~~~a~~~~~l~~~~~~-l-~  306 (343)
                      |+++++.        ++++.+....                         . ..++++.....++ .+++....++ + +
T Consensus       286 g~l~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~-~aal~~~~~~~~~~  356 (465)
T 3e9k_A          286 AGAFIHE--------KHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSL-HASLEIFKQATMKA  356 (465)
T ss_dssp             CEEEECG--------GGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHH-HHHHHHHHHHCHHH
T ss_pred             EEEEEcH--------HHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHH-HHHHHHHHHcCHHH
Confidence            9988854        2222221100                         0 0124444444444 4444432332 2 3


Q ss_pred             HHHHHHHHHHHHHHhhcCC----------CCceeeCCC----CceEeeec
Q 019298          307 HGNFLENFAGSCVPSYKLI----------PELINFKST----GSSLKYLD  342 (343)
Q Consensus       307 ~~~~~~~~~~~~~~~L~~~----------~g~~~~~~~----~g~~~~~~  342 (343)
                      .+++++++++++.+.|+++          +|+.+..|.    .|.++|++
T Consensus       357 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~  406 (465)
T 3e9k_A          357 LRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTIT  406 (465)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEE
T ss_pred             HHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEE
Confidence            7888888999999988874          688876765    36677664

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*

Probab=99.90  E-value=7.6e-23  Score=189.74  Aligned_cols=269  Identities=15%  Similarity=0.076  Sum_probs=165.8

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCC------CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCe
Q 019298           53 TTHVATEAVAEALLSEKFNGYA------PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGAN  126 (343)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~Y~------~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~  126 (343)
                      .+|.+.+++.+++.+....+|+      .....+.+++...+++.+.++  +++++|++++| ++++..++++++++||+
T Consensus        42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~~v~~~sG-s~a~~~a~~~~~~~gd~  118 (420)
T 3gbx_A           42 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG--ADYANVQPHSG-SQANFAVYTALLQPGDT  118 (420)
T ss_dssp             CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHT--CSEEECCCSSH-HHHHHHHHHHHCCTTCE
T ss_pred             CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhC--CCCceeEecCc-HHHHHHHHHHhcCCCCE
Confidence            5899999999887543211222      222334444433344443333  45566666666 78999999999999999


Q ss_pred             EEEeCCCCcchH---HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHHHHHHHHHHH
Q 019298          127 ILLPRPGFPIYE---LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQHLQKLAETA  202 (343)
Q Consensus       127 vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~l~~~~  202 (343)
                      |+++.|+|..+.   ......|..+..+++..+.++.+|+++|++++++ +++++++++|+||+  ..   ++++|.++|
T Consensus       119 v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~--~~---~l~~l~~l~  193 (420)
T 3gbx_A          119 VLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEHKPKMIIGGFSAYSG--VV---DWAKMREIA  193 (420)
T ss_dssp             EEEEEEC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHHCCSEEEECCTTCCS--CC---CHHHHHHHH
T ss_pred             EEecchhhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHhcCCeEEEEecCccCC--cc---CHHHHHHHH
Confidence            999999997733   2222333333333332235567999999999876 58999998999974  43   378999999


Q ss_pred             hhcCcEEEEccCCCcc-ccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc
Q 019298          203 NKLKTLVIADEVYGHL-VFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI  281 (343)
Q Consensus       203 ~~~~~~~i~D~ay~~~-~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~  281 (343)
                      ++||+++|+||+|... .+.+..+..+.     ...++++|+||+++  |.+.||+++++..     .++.+.+......
T Consensus       194 ~~~~~~li~De~~~~~~~~~~~~~~~~~-----~~di~~~s~sK~~~--g~~gg~~~~~~~~-----~~~~~~~~~~~~~  261 (420)
T 3gbx_A          194 DSIGAYLFVDMAHVAGLIAAGVYPNPVP-----HAHVVTTTTHKTLA--GPRGGLILAKGGD-----EELYKKLNSAVFP  261 (420)
T ss_dssp             HHTTCEEEEECTTTHHHHHTTSSCCSTT-----TSSEEEEESSGGGC--SCSCEEEEESSCC-----HHHHHHHHHHHC-
T ss_pred             HHcCCEEEEECCcchhceecccCCcccc-----cCCEEEeecccCCC--CCCceEEEEcCCc-----HHHHHHhhhhcCC
Confidence            9999999999998643 32322111111     13489999999975  5556999985310     2466666554321


Q ss_pred             --ccCcchHHHHHHHhccch-hh-HHHHHHHHHHHHHHHHHHHhhcCCCCceeeCC-CCceEeeecC
Q 019298          282 --LGDPATFIQVCIMYGCLS-TI-MQIMIHGNFLENFAGSCVPSYKLIPELINFKS-TGSSLKYLDL  343 (343)
Q Consensus       282 --~~~~~~~~~~a~~~~~l~-~~-~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~-~~g~~~~~~l  343 (343)
                        ...++...+.++ ..++. .. ..+-+.+++++++++.+.+.|.+. |+.+..+ ..++++|+++
T Consensus       262 ~~~~~~~~~~~~a~-~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~  326 (420)
T 3gbx_A          262 SAQGGPLMHVIAGK-AVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR-GYKVVSGGTENHLFLLDL  326 (420)
T ss_dssp             ---CCCCHHHHHHH-HHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEEC
T ss_pred             CCCCCcchhHHHHH-HHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc-CCeeccCCCCCeEEEEEc
Confidence              223334434443 22222 11 233347888999999999999885 7886443 6778888753

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}

Probab=99.90  E-value=1e-22  Score=190.66  Aligned_cols=276  Identities=13%  Similarity=0.061  Sum_probs=180.8

Q ss_pred             ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC---CCCHHHH--HHHH-HHHhhhCCCCCCCCcEEE-ecC
Q 019298           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT---AGLPLTR--RAIA-EYLSRDLPYKLTPNDVFV-TSG  108 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~---~g~~~lr--~~ia-~~~~~~~~~~~~~~~i~~-~~g  108 (343)
                      +.|+|..+.      ...+|.+++++.+++.+....+|+..   .|...++  +.++ +++.+.+|.    +.+.+ ++|
T Consensus        46 ~~i~l~~~~------~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~----~~~~v~~~s  115 (447)
T 3h7f_A           46 DTLEMIASE------NFVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGA----EFANVQPHS  115 (447)
T ss_dssp             HSEECCTTC------CCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC----SEEECCCSS
T ss_pred             CceeEecCC------CCCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCC----CceEEEeCC
Confidence            568885543      23489999999887754322234331   2444444  4444 555443332    23444 778


Q ss_pred             hHHHHHHHHHHhcCCCCeEEEeCCCCcch-HHH--HHh--cCceeEEeecCCCCCCCCCHHHHHhhhc-CCceEEEEeCC
Q 019298          109 CTQAIDVAMALLSRPGANILLPRPGFPIY-ELS--AAF--RHIEVRHFDLLPDKGWEVDLDDIESLAD-QNTVALVIINP  182 (343)
Q Consensus       109 ~~~al~~~~~~l~~~gd~vl~~~p~~~~~-~~~--~~~--~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~p  182 (343)
                      +++++..++.+++++||+|++++|+|..+ ...  ...  .+..+..+++++ +++.+|+++++++++ .+++++++++|
T Consensus       116 Gs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~i~~~~~  194 (447)
T 3h7f_A          116 GAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDP-ATHLIDMDAVRATALEFRPKVIIAGWS  194 (447)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCT-TTCSCCHHHHHHHHHHHCCSEEEEECS
T ss_pred             HHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCc-ccCCcCHHHHHHHHHhcCCeEEEEcCC
Confidence            89999999999999999999999999772 111  112  234555555543 346799999999885 47888888899


Q ss_pred             CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCC-ccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298          183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG-HLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (343)
Q Consensus       183 ~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~  261 (343)
                      +||++.     ++++|.++|+++|+++|+|++|. ++.+.+..+..+   .  ...+++.|+||++  +|+|.||++++.
T Consensus       195 ~~~~~~-----~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~---~--~~di~~~s~sK~l--~G~~gG~i~~~~  262 (447)
T 3h7f_A          195 AYPRVL-----DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV---P--HADVVSTTVHKTL--GGGRSGLIVGKQ  262 (447)
T ss_dssp             SCCSCC-----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST---T--TCSEEEEESSGGG--CCCSCEEEEECG
T ss_pred             CCCCcc-----CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC---C--CCcEEEecCCcCC--CCCCeEEEEECH
Confidence            999886     57899999999999999999975 344443322222   1  1128899999996  478999999853


Q ss_pred             CCCCCCchHHHHHHhhhhc-c-ccCcchHHHHHHHhccchh-hH-HHHHHHHHHHHHHHHHHHhhcCC----CCceee-C
Q 019298          262 PCGMFRKPKVVERMKKYFD-I-LGDPATFIQVCIMYGCLST-IM-QIMIHGNFLENFAGSCVPSYKLI----PELINF-K  332 (343)
Q Consensus       262 ~~~~~~~~~~~~~l~~~~~-~-~~~~~~~~~~a~~~~~l~~-~~-~~l~~~~~~~~~~~~~~~~L~~~----~g~~~~-~  332 (343)
                              ++++.+..... . .++++.....++ ..++.. .. .+-+.++++.++++.+.+.|.+.    +|+.+. .
T Consensus       263 --------~~~~~l~~~~~~~~~~~~~~~~~~a~-~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~  333 (447)
T 3h7f_A          263 --------QYAKAINSAVFPGQQGGPLMHVIAGK-AVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSG  333 (447)
T ss_dssp             --------GGHHHHHHHHTTTTCSSCCHHHHHHH-HHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGG
T ss_pred             --------HHHHHHhhhcCCcccCCccHHHHHHH-HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecC
Confidence                    56777765532 1 223333333333 222322 12 33348888999999999999876    577753 3


Q ss_pred             CCCceEeeecC
Q 019298          333 STGSSLKYLDL  343 (343)
Q Consensus       333 ~~~g~~~~~~l  343 (343)
                      +.+++++|+++
T Consensus       334 ~~~~~~~~~~~  344 (447)
T 3h7f_A          334 GTDVHLVLVDL  344 (447)
T ss_dssp             SCSSSEEEEEC
T ss_pred             CCCCCEEEEEc
Confidence            46778888753

>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}

Probab=99.90  E-value=2.7e-22  Score=183.68  Aligned_cols=243  Identities=15%  Similarity=0.160  Sum_probs=173.8

Q ss_pred             CCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH-HHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeE
Q 019298           50 CFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAI-AEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANI  127 (343)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~i-a~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~v  127 (343)
                      .+++++.+.+++.+.+..+.+..|++  ...+|++++ +++++       ..+++++++|+++++..++.++ +++||+|
T Consensus        11 ~~~~~~~i~~a~~~~~~~~~~~~~~~--~~~~l~~~~~a~~~g-------~~~~~v~~~sgt~al~~al~~l~~~~Gd~V   81 (377)
T 3ju7_A           11 STVPVIEYLDELKEIDASHIYTNYGP--INQRFEQTIMSGFFQ-------NRGAVTTVANATLGLMAAIQLKKRKKGKYA   81 (377)
T ss_dssp             CCCCGGGGHHHHHHHHHHTCCSSSCH--HHHHHHHHHHHHTST-------TCSEEEEESCHHHHHHHHHHHHSCTTCCEE
T ss_pred             CCCCcHHHHHHHHHHHHcCCcccCCH--HHHHHHHHHHHHHhC-------CCCeEEEeCCHHHHHHHHHHHcCCCCcCEE
Confidence            37888999999999987654322333  468999999 99982       2578999999999999999998 8999999


Q ss_pred             EEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhh-cCC--ceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298          128 LLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA-DQN--TVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (343)
Q Consensus       128 l~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~-~~~--~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~  204 (343)
                      +++.|+|..+...+...|.+++.+++++ +++.+|++++++++ +++  +++|+   |+||+|...+   +++|.++|+ 
T Consensus        82 i~~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~---~~~i~~la~-  153 (377)
T 3ju7_A           82 LMPSFTFPATPLAAIWCGLEPYFIDISI-DDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMN---LEEYEELEK-  153 (377)
T ss_dssp             EEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCC---CHHHHHHHH-
T ss_pred             EECCCCcHHHHHHHHHcCCEEEEEecCC-ccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccC---HHHHHHHHh-
Confidence            9999999999999999999999998864 46789999999988 555  77766   7889999865   677788888 


Q ss_pred             cCcEEEEccCCCcccc-CCCCCCcccccCCCCCEEEEccC--ccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc
Q 019298          205 LKTLVIADEVYGHLVF-GDKPFVPMGVFGSTVPILTLGSL--SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI  281 (343)
Q Consensus       205 ~~~~~i~D~ay~~~~~-~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~  281 (343)
                      +|+++|+|++|+.... .+....  ..+.    .+.+.||  +|.++. | +.|++++++       +++.++++.....
T Consensus       154 ~~~~vi~D~a~a~g~~~~~~~~g--~~~~----d~~~~S~~~~K~l~~-g-~gG~~~~~~-------~~l~~~~~~~~~~  218 (377)
T 3ju7_A          154 KGVPVVVDAAPGFGLMNGGMHYG--QDFS----GMIIYSFHATKPFGI-G-EGGLIYSKN-------EEDIQRIKRMGNF  218 (377)
T ss_dssp             TTCCBEEECTTCTTCEETTEETT--TTCS----SEEEEECBTTSSSCC-B-SCEEEEESC-------HHHHHHHHHHTBT
T ss_pred             cCCEEEEECCCccCCeECCEecc--CCCC----cEEEEECCCCCcCCC-C-CcEEEEECC-------HHHHHHHHHHHhc
Confidence            9999999999986432 211110  1111    1555555  688775 5 578887754       5677777765431


Q ss_pred             -------------ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCc
Q 019298          282 -------------LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPEL  328 (343)
Q Consensus       282 -------------~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~  328 (343)
                                   ....+.+..+++ ...+..   +-+..++.+++++.+.+.|..++++
T Consensus       219 g~~~~~~~~~~g~~~~~~~~~aa~~-~~~l~~---l~~~~~~~~~~~~~~~~~L~~~~~~  274 (377)
T 3ju7_A          219 GFDTNRECTMMGFNCKMSEYAAAIG-IATMKK---WDDKLKERTRISEWYKQLLQSNGLM  274 (377)
T ss_dssp             TBCTTSCBCSSCCBCCCCHHHHHHH-HHHHHT---HHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred             CCCCCCceeeccccCCCCHHHHHHH-HHHHHH---HHHHHHHHHHHHHHHHHHhcCCCCc
Confidence                         223444544433 333322   2225556666666777777777554

>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}

Probab=99.90  E-value=5e-22  Score=184.46  Aligned_cols=225  Identities=16%  Similarity=0.113  Sum_probs=159.3

Q ss_pred             HHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeC-CCCcchHHHH----------HhcCceeEEe
Q 019298           83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPR-PGFPIYELSA----------AFRHIEVRHF  151 (343)
Q Consensus        83 r~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~-p~~~~~~~~~----------~~~g~~~~~~  151 (343)
                      ++++.+.+.+.+|......+++++ |+++++..++.+++++||+|++++ |.|..+...+          +..|.+++.+
T Consensus        67 ~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v  145 (431)
T 3ht4_A           67 RDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAV  145 (431)
T ss_dssp             HHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEEC
T ss_pred             HHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEEe
Confidence            444555444444432222233345 668999999999999999999998 9999887655          3468899888


Q ss_pred             ecCCCCCCCCCHHHHHhhhcCCceEEEEe-CCCCCcccccCHHHHHHHHHHHhh--cCcEEEEccCCCccccCCCCCCcc
Q 019298          152 DLLPDKGWEVDLDDIESLADQNTVALVII-NPGNPCGNVYSYQHLQKLAETANK--LKTLVIADEVYGHLVFGDKPFVPM  228 (343)
Q Consensus       152 ~~~~~~~~~~d~~~l~~~~~~~~~~i~~~-~p~nptG~~~~~~~l~~l~~~~~~--~~~~~i~D~ay~~~~~~~~~~~~~  228 (343)
                      +.+.  ++.+|++++++++++++++|+++ +||||+|...+.+++++|+++|++  +|+++|+|++|+.+.++....   
T Consensus       146 ~~~~--~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~---  220 (431)
T 3ht4_A          146 PLTE--GGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPC---  220 (431)
T ss_dssp             CBCT--TSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGG---
T ss_pred             CCCC--CCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCcc---
Confidence            8764  46799999999999899999999 589999999999999999999999  999999999999987543311   


Q ss_pred             cccCCCCCEEEEccCccccCC-CCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc---c--cCcchHHHHHHHhccchhhH
Q 019298          229 GVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI---L--GDPATFIQVCIMYGCLSTIM  302 (343)
Q Consensus       229 ~~~~~~~~~i~~~S~sK~~~~-~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~---~--~~~~~~~~~a~~~~~l~~~~  302 (343)
                       .+   +..++++|+||.++. .+...||++++        ++++++++.....   .  ..++.....++ ...+   .
T Consensus       221 -~~---g~Di~~~S~sK~lgg~~~~~GG~v~~~--------~~li~~l~~~~~~~~~g~~~~~~~~~~~~~-~~~l---~  284 (431)
T 3ht4_A          221 -HV---GADLMAGSLIKNPGGGIVKTGGYIVGK--------EQYVEACAYRLTSPGIGAEAGASLYSLQEM-YQGF---F  284 (431)
T ss_dssp             -GT---TCSEEEEETTSGGGTTTCSSCEEEEEC--------HHHHHHHHHHHSCTTTTTSCSCCCSCSHHH-HHHH---H
T ss_pred             -cc---CCeEEEcCccccCCCCCCCceEEEEec--------HHHHHHHHHHhccCCcccccCccHHHHHHH-HhHh---h
Confidence             11   223999999999665 23444999884        4788888764321   1  11111111222 1111   2


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298          303 QIMIHGNFLENFAGSCVPSYKLIPELIN  330 (343)
Q Consensus       303 ~~l~~~~~~~~~~~~~~~~L~~~~g~~~  330 (343)
                      ..-.++++..++...+.+.|+++ |+.+
T Consensus       285 ~~~~~~~~~~~~a~~l~~~L~~~-g~~v  311 (431)
T 3ht4_A          285 LAPHVAGQALKGAIFTAAFLEKL-GMNT  311 (431)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH-TCCE
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhC-cCEe
Confidence            22236677788888888888887 5555

>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*

Probab=99.90  E-value=2.1e-21  Score=184.52  Aligned_cols=266  Identities=9%  Similarity=0.020  Sum_probs=191.8

Q ss_pred             HHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC-------------
Q 019298           56 VATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR-------------  122 (343)
Q Consensus        56 ~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~-------------  122 (343)
                      .+.+.+..++... ...|....+..++++.+++|+.+.+|.+.+++.+++|+|+++++..++.++.+             
T Consensus       111 ~~~e~l~~~~~~~-~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~  189 (511)
T 3vp6_A          111 LAGEWLTSTANTN-MFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAA  189 (511)
T ss_dssp             HHHHHHHHHHCCC-SSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGG
T ss_pred             HHHHHHHHHhccC-CCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCccc
Confidence            3455666666543 34787777888999999999999888776678999999999999988877654             


Q ss_pred             -CCCeEEEeCCCCcchHHHHHhcCc---eeEEeecCCCCCCCCCHHHHHhhhcCC------ceEEEEeCCCCCcccccCH
Q 019298          123 -PGANILLPRPGFPIYELSAAFRHI---EVRHFDLLPDKGWEVDLDDIESLADQN------TVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       123 -~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~i~~~~p~nptG~~~~~  192 (343)
                       +++.|+++.++|..+...++..|.   +++.++.+  .++.+|+++|++++++.      +++++++.|+||||.+   
T Consensus       190 ~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~v---  264 (511)
T 3vp6_A          190 VPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF---  264 (511)
T ss_dssp             SCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCB---
T ss_pred             CCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecC--CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccc---
Confidence             567899999999999999999998   78888775  45789999999998754      7889999999999999   


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCC-cccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~-~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  271 (343)
                      +++++|+++|++||+++++|++|+.......... .+...  ..-.+++.+++|.++.+ ..+|+++++++       .+
T Consensus       265 d~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~--~~aDsv~~~~hK~l~~p-~g~g~l~~~~~-------~~  334 (511)
T 3vp6_A          265 DPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGI--ERANSVTWNPHKMMGVL-LQCSAILVKEK-------GI  334 (511)
T ss_dssp             CCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTG--GGCSEEEECTTSTTCCC-SCCEEEEESST-------TH
T ss_pred             ccHHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCC--ccCCEEEECcccccCCC-cCeEEEEEeCH-------HH
Confidence            7789999999999999999999998654322111 11111  11237778999998765 66899888653       24


Q ss_pred             HHHHhhhh-cc-c-------------------c-CcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCc
Q 019298          272 VERMKKYF-DI-L-------------------G-DPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPEL  328 (343)
Q Consensus       272 ~~~l~~~~-~~-~-------------------~-~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~  328 (343)
                      .+...... .. .                   + ....+...++ ..++.  .++++ ++++..++.+++.+.|+++||+
T Consensus       335 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~a-l~~~g--~~gl~~~~~~~~~~a~~l~~~L~~~pg~  411 (511)
T 3vp6_A          335 LQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLM-WKAKG--TVGFENQINKCLELAEYLYAKIKNREEF  411 (511)
T ss_dssp             HHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHH-HHHHH--HHHHHHHHHHHHHHHHHHHHHHHSCTTE
T ss_pred             HHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHH-HHHHh--HHHHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence            44332110 00 0                   0 0112222222 12221  33444 8888899999999999999999


Q ss_pred             eeeC---CCCceEee
Q 019298          329 INFK---STGSSLKY  340 (343)
Q Consensus       329 ~~~~---~~~g~~~~  340 (343)
                      ++..   |+.++..|
T Consensus       412 ~l~~~~~p~~~~v~f  426 (511)
T 3vp6_A          412 EMVFNGEPEHTNVCF  426 (511)
T ss_dssp             EESSSSCCSSSCEEE
T ss_pred             EEEecCCCCeEEEEE
Confidence            9654   55665444

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*

Probab=99.90  E-value=2.9e-21  Score=183.55  Aligned_cols=264  Identities=9%  Similarity=0.008  Sum_probs=186.7

Q ss_pred             HHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC--------CC-----C
Q 019298           59 EAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR--------PG-----A  125 (343)
Q Consensus        59 ~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~--------~g-----d  125 (343)
                      +.+...+.. ....|....+..++++.+.+++.+.+|.+.+++++++|+|+++++..++.++..        +|     +
T Consensus       111 ~~l~~~~n~-~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~  189 (504)
T 2okj_A          111 EWLTSTANT-NMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPK  189 (504)
T ss_dssp             HHHHHHHCC-BSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCC
T ss_pred             HHHHHhhcc-CCCchhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCC
Confidence            444444333 334566555667788888888887777654478999999999999999988752        56     6


Q ss_pred             -eEEEeCCCCcchHHHHHhcCc---eeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCCCcccccCHHHH
Q 019298          126 -NILLPRPGFPIYELSAAFRHI---EVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHL  195 (343)
Q Consensus       126 -~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l  195 (343)
                       .|+++.++|..+...+...|.   +++.++++  .++.+|+++|++++++      .+++|++++|+||||.+   +++
T Consensus       190 ~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i---~~l  264 (504)
T 2okj_A          190 LVLFTSEQSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF---DPI  264 (504)
T ss_dssp             EEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCB---CCH
T ss_pred             eEEEECCcchHHHHHHHHHcCCCcccEEEEecC--CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCc---CCH
Confidence             799999999999999988877   78888775  4578999999998865      47888999999999999   568


Q ss_pred             HHHHHHHhhcCcEEEEccCCCccccCCCCC-CcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298          196 QKLAETANKLKTLVIADEVYGHLVFGDKPF-VPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (343)
Q Consensus       196 ~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~-~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~  274 (343)
                      ++|+++|+++|+++++|++|+.+.+..... ..+....  ...+++.|++|.++.+ .++|++++.++       ++.+.
T Consensus       265 ~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~--~~D~i~~~~hK~~~~p-~~~g~l~~~~~-------~~~~~  334 (504)
T 2okj_A          265 QEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIE--RANSVTWNPHKMMGVL-LQCSAILVKEK-------GILQG  334 (504)
T ss_dssp             HHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEEEEESST-------THHHH
T ss_pred             HHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcc--cCCEEEECchhhcCCC-cceEEEEEECH-------HHHHH
Confidence            889999999999999999999876543222 1111111  2237788999997766 68999999653       24443


Q ss_pred             Hh-hhhccc-c--------------------CcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeC
Q 019298          275 MK-KYFDIL-G--------------------DPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFK  332 (343)
Q Consensus       275 l~-~~~~~~-~--------------------~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~  332 (343)
                      .. ...... .                    ....+.+.++ ..++.. ..+.+..++..++++++.+.|+++||+++..
T Consensus       335 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~-l~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~  412 (504)
T 2okj_A          335 CNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLM-WKAKGT-VGFENQINKCLELAEYLYAKIKNREEFEMVF  412 (504)
T ss_dssp             HHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHTTCTTEEESS
T ss_pred             HhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHH-HHHhhH-HHHHHHHHHHHHHHHHHHHHHhcCCCEEEEe
Confidence            21 111100 0                    0123444444 233321 2333478888899999999999988999654


Q ss_pred             ---CCCceEee
Q 019298          333 ---STGSSLKY  340 (343)
Q Consensus       333 ---~~~g~~~~  340 (343)
                         |+.+++.|
T Consensus       413 ~~~p~~~~v~f  423 (504)
T 2okj_A          413 NGEPEHTNVCF  423 (504)
T ss_dssp             SSCCSSSCEEE
T ss_pred             cCCCCeEEEEE
Confidence               77777765

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}

Probab=99.90  E-value=4.6e-22  Score=188.74  Aligned_cols=304  Identities=12%  Similarity=0.016  Sum_probs=203.0

Q ss_pred             cccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhh
Q 019298           14 IITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRD   93 (343)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~   93 (343)
                      ..+.......+.+....  ++++.+++..-.     ...+++.+.+++.+++.... ..|....+..++++.+.+++.+.
T Consensus        36 ~~~~~~~~~~~~~~i~l--~gnp~~~l~s~~-----t~~~~~~v~~~l~~~~~~~~-~~~~~~p~~~~le~~~~~~la~l  107 (502)
T 3hbx_A           36 SIPKEAAYQIINDELML--DGNPRLNLASFV-----TTWMEPECDKLIMSSINKNY-VDMDEYPVTTELQNRCVNMIAHL  107 (502)
T ss_dssp             CCCHHHHHHHHHHHGGG--SCCGGGBTTCCS-----CCCCCHHHHHHHHHTTTCBT-TCTTTCHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHhcc--CCCCCceecccc-----CCCCCHHHHHHHHHHhccCC-CChhcChhHHHHHHHHHHHHHHH
Confidence            44555665555554432  133444443311     13467889999888876532 23444445678888888888888


Q ss_pred             CCCCCCCCcEE---EecChHHHHHHHHHHhcCC--------CC-----eEEEeCCCCcchHHHHHhcCceeEEeecCCCC
Q 019298           94 LPYKLTPNDVF---VTSGCTQAIDVAMALLSRP--------GA-----NILLPRPGFPIYELSAAFRHIEVRHFDLLPDK  157 (343)
Q Consensus        94 ~~~~~~~~~i~---~~~g~~~al~~~~~~l~~~--------gd-----~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~  157 (343)
                      +|.+..+++++   +|+|+++++..++.++..+        |+     .|+++.++|..+...++..|++++.+++++ +
T Consensus       108 ~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~-~  186 (502)
T 3hbx_A          108 FNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-G  186 (502)
T ss_dssp             TTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBT-T
T ss_pred             hCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCC-C
Confidence            88765455554   5899999999998887654        76     999999999999999999999999998754 4


Q ss_pred             CCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhc------CcEEEEccCCCcccc---CCCCCCcc
Q 019298          158 GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL------KTLVIADEVYGHLVF---GDKPFVPM  228 (343)
Q Consensus       158 ~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~------~~~~i~D~ay~~~~~---~~~~~~~~  228 (343)
                      ++.+|+++|++++++++++|++++|+||||.+   +++++|.++|+++      |+++++|++|+++..   .+.....+
T Consensus       187 ~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~---~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~  263 (502)
T 3hbx_A          187 YYVMDPQQAVDMVDENTICVAAILGSTLNGEF---EDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDF  263 (502)
T ss_dssp             BCSCCHHHHHHHCCTTEEEEEEEBSCTTTCCB---CCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCST
T ss_pred             cCcCCHHHHHHHHhhCCEEEEEecCCCCCCcc---cCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCccccccc
Confidence            47899999999999899999999999999999   4567778888888      999999999997642   22111111


Q ss_pred             cccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc----------ccCc---chHHHHHHHh
Q 019298          229 GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI----------LGDP---ATFIQVCIMY  295 (343)
Q Consensus       229 ~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~----------~~~~---~~~~~~a~~~  295 (343)
                         ...+-..+..|.+|. +..+.++||+++.++..+      .+.+......          ..+.   ....+.++ .
T Consensus       264 ---~~~~~D~v~~s~hK~-l~~p~g~G~~~~~~~~~l------~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~a-l  332 (502)
T 3hbx_A          264 ---RLPLVKSINVSGHKY-GLVYAGIGWVIWRNKEDL------PEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQ-L  332 (502)
T ss_dssp             ---TSTTEEEEEEETTTT-TCCCSSCEEEEESSGGGS------CGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHH-H
T ss_pred             ---CCCCceEEEECcccc-cCCCCCeEEEEEeCHHHh------hHHhccCcccccCCCCCccccCCchHHHHHHHHHH-H
Confidence               111224777888998 566778999988653311      1111100000          0111   12223222 1


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCC-CCceEeee
Q 019298          296 GCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKS-TGSSLKYL  341 (343)
Q Consensus       296 ~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~-~~g~~~~~  341 (343)
                      ..+. ...+.+.+++..++++++.+.|++++++.+..+ ....++.+
T Consensus       333 ~~lg-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f  378 (502)
T 3hbx_A          333 IRLG-HEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAF  378 (502)
T ss_dssp             HHHH-HHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEE
T ss_pred             HHHH-HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEE
Confidence            1111 133444788888888999999999978986555 34444443

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...

Probab=99.89  E-value=3.6e-22  Score=184.35  Aligned_cols=272  Identities=13%  Similarity=0.104  Sum_probs=177.5

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC------CCCCHHHH----HHHHHHHhhhCCCCCCCCcE
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP------TAGLPLTR----RAIAEYLSRDLPYKLTPNDV  103 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~g~~~lr----~~ia~~~~~~~~~~~~~~~i  103 (343)
                      +..+++++.+.       +.++.+.+++.+++.+.....|+.      .....+++    +.+++++    |  .+++.+
T Consensus        23 ~~~~~~~~~~~-------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~----g--~~~~~i   89 (405)
T 2vi8_A           23 HAKIELIASEN-------FVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLF----G--AEHANV   89 (405)
T ss_dssp             HHSEECCTTCC-------CCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH----T--CSEEEC
T ss_pred             hcceeeccCcc-------cCCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHh----C--CCceEE
Confidence            34556665443       128999999988875321112221      11233455    4666666    2  334444


Q ss_pred             EEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH-H--HHhcCc--eeEEeecCCCCCCCCCHHHHHhhhcC-CceEE
Q 019298          104 FVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL-S--AAFRHI--EVRHFDLLPDKGWEVDLDDIESLADQ-NTVAL  177 (343)
Q Consensus       104 ~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~-~--~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i  177 (343)
                      ++++| ++++..+++++.++||+|+++.|+|+.+.. .  +...|.  +++.+++++ +++.+|++++++.+++ +++++
T Consensus        90 ~~~sG-t~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v  167 (405)
T 2vi8_A           90 QPHSG-AQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDP-ETHVIDYDDVREKARLHRPKLI  167 (405)
T ss_dssp             CCSSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCSEE
T ss_pred             EecCc-HHHHHHHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEeccccc-ccCCcCHHHHHHHHHhcCCeEE
Confidence            45565 999999999999999999999999987743 1  123333  666666543 4567999999999875 77777


Q ss_pred             EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCcccc-CCCCCCcccccCCCCCEEEEccCccccC-CCCCcEE
Q 019298          178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF-GDKPFVPMGVFGSTVPILTLGSLSKRWI-VPGWRLG  255 (343)
Q Consensus       178 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~-~~~~~~~~~~~~~~~~~i~~~S~sK~~~-~~G~r~G  255 (343)
                      ++ +|+|. |..   .++++|.++|++||+++|+|++|..... .+.....   +.  ...++++|+||+|+ +.|   |
T Consensus       168 ~~-~~~~~-~~~---~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~---~~--~~di~~~s~sK~~~g~~g---G  234 (405)
T 2vi8_A          168 VA-AAAAY-PRI---IDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNP---VP--YAHFVTTTTHKTLRGPRG---G  234 (405)
T ss_dssp             EE-CCSSC-CSC---CCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCS---TT--TCSEEEEESSSTTCCCSC---E
T ss_pred             EE-eCCCC-Ccc---CCHHHHHHHHHHcCCEEEEEccccccccccCcCCCc---cc--cCCEEEEeccccCCCCCC---e
Confidence            66 55553 343   2478999999999999999999995332 2221111   11  12288999999987 566   9


Q ss_pred             EEEEeCCCCCCCchHHHHHHhhhhc-cccC-cchHHHHHHHhccchhh-HHHHH-HHHHHHHHHHHHHHhhcCCCCceee
Q 019298          256 WFVTTDPCGMFRKPKVVERMKKYFD-ILGD-PATFIQVCIMYGCLSTI-MQIMI-HGNFLENFAGSCVPSYKLIPELINF  331 (343)
Q Consensus       256 ~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~-~~~~~~~a~~~~~l~~~-~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~  331 (343)
                      |++++        +++++.++.... ...+ +++....++ .+++... ..+++ .+++++++++.+.+.|+++ |+.+.
T Consensus       235 ~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~aa~-~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~  304 (405)
T 2vi8_A          235 MILCQ--------EQFAKQIDKAIFPGIQGGPLMHVIAAK-AVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-GFTLV  304 (405)
T ss_dssp             EEEEC--------HHHHHHHHHHHTTTTCSSCCHHHHHHH-HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEG
T ss_pred             EEEEc--------HHHHHHHHhhhcccccCCCCHHHHHHH-HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeEe
Confidence            99984        367777776542 2222 234433333 4444432 13444 8889999999999999988 88865


Q ss_pred             CC-CCceEeeecC
Q 019298          332 KS-TGSSLKYLDL  343 (343)
Q Consensus       332 ~~-~~g~~~~~~l  343 (343)
                      .| .+++++|+++
T Consensus       305 ~~~~~~~~~~~~~  317 (405)
T 2vi8_A          305 SGGTDNHLLLVDL  317 (405)
T ss_dssp             GGSCSSSEEEEEC
T ss_pred             cCCCCceEEEEEc
Confidence            55 4688888864

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A

Probab=99.89  E-value=2.1e-22  Score=188.63  Aligned_cols=280  Identities=11%  Similarity=0.043  Sum_probs=176.3

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHH-H-HHHH---HHhcCCCCCCCC---CCCCHHHHHHHHHHHhhhCCCCCCCCcEE
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVAT-E-AVAE---ALLSEKFNGYAP---TAGLPLTRRAIAEYLSRDLPYKLTPNDVF  104 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~-~-~~~~---~~~~~~~~~Y~~---~~g~~~lr~~ia~~~~~~~~~~~~~~~i~  104 (343)
                      ++.++||+.+...  ..++ .+|.+. + ++.+   ++....  .|.+   .....++++.+++++    + ...+++|+
T Consensus        53 g~~ylD~~~~~~~--~~lG~~~p~v~~~~A~~~~~~~~~~~~--~~~~~~~~~~~~~la~~la~~~----~-~~~~~~v~  123 (449)
T 2cjg_A           53 GRRYLDMFTFVAS--SALGMNPPALVDDREFHAELMQAALNK--PSNSDVYSVAMARFVETFARVL----G-DPALPHLF  123 (449)
T ss_dssp             CCEEEESSHHHHT--CSSCBSCHHHHTCHHHHHHHHHHHTCC--CCTTTCCCHHHHHHHHHHHHHH----C-CTTCCEEE
T ss_pred             CcEEEEccCCccc--cCCCCCCHHHHHHHHHHHHHHHHHhcC--CCCcccCCHHHHHHHHHHHHhc----C-CCCCCEEE
Confidence            5678898777643  2244 489999 8 9998   766532  2321   112244555555555    2 24678999


Q ss_pred             EecChHHHHHHHHHHhc---C----------C-CCeEEEeCCCCcchHHHHHhc-C--------c-----eeEEeecCCC
Q 019298          105 VTSGCTQAIDVAMALLS---R----------P-GANILLPRPGFPIYELSAAFR-H--------I-----EVRHFDLLPD  156 (343)
Q Consensus       105 ~~~g~~~al~~~~~~l~---~----------~-gd~vl~~~p~~~~~~~~~~~~-g--------~-----~~~~~~~~~~  156 (343)
                      +++|+++++..+++.+.   .          + ||+|++.+|+|+++...+... +        .     ++..++....
T Consensus       124 ~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  203 (449)
T 2cjg_A          124 FVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRP  203 (449)
T ss_dssp             EESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCT
T ss_pred             EeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCc
Confidence            99999999999987643   2          2 899999999998765432222 1        1     3444443210


Q ss_pred             CCC--------CCCHHHHHhhhc---CCceEEEEeCC-CCCcc-cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCC
Q 019298          157 KGW--------EVDLDDIESLAD---QNTVALVIINP-GNPCG-NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDK  223 (343)
Q Consensus       157 ~~~--------~~d~~~l~~~~~---~~~~~i~~~~p-~nptG-~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~  223 (343)
                      ...        ..++++|++.++   +++++ ++++| +||+| ..++.+++++|.++|++||+++|+||+|.++.+.+.
T Consensus       204 ~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~  282 (449)
T 2cjg_A          204 GLDEPAMAALEAEALRQARAAFETRPHDIAC-FVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGT  282 (449)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHHSTTTEEE-EEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS
T ss_pred             hhhccccchhhHHHHHHHHHHHHhcCCceEE-EEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCc
Confidence            011        135566888875   34445 55666 68999 589999999999999999999999999998766554


Q ss_pred             CCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHh-----hh-hccccCcchHHHHHHHhcc
Q 019298          224 PFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK-----KY-FDILGDPATFIQVCIMYGC  297 (343)
Q Consensus       224 ~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~-----~~-~~~~~~~~~~~~~a~~~~~  297 (343)
                      . .....++...++   .|+||.|     |+||+++++        ++++.+.     .. ...+++.+++++.++ .++
T Consensus       283 ~-~~~~~~~~~~di---~t~sK~l-----~iG~~~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa-~aa  344 (449)
T 2cjg_A          283 A-WAYQQLDVAPDI---VAFGKKT-----QVCGVMAGR--------RVDEVADNVFAVPSRLNSTWGGNLTDMVRA-RRI  344 (449)
T ss_dssp             S-STHHHHTCCCSE---EEECGGG-----SSEEEEECG--------GGGGSTTCTTTSTTSSCCSSSSCHHHHHHH-HHH
T ss_pred             c-eeecccCCCceE---EEecCcc-----cEEEEEECH--------HHhhhhhhcccCCcccccCCCCCHHHHHHH-HHH
Confidence            2 122222222233   3789997     799999864        4544321     11 223556788888887 555


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHhhcC----CCC-ceeeCCCCceEeeecC
Q 019298          298 LSTIMQIMIHGNFLENFAGSCVPSYKL----IPE-LINFKSTGSSLKYLDL  343 (343)
Q Consensus       298 l~~~~~~l~~~~~~~~~~~~~~~~L~~----~~g-~~~~~~~~g~~~~~~l  343 (343)
                      |+...+ -+..++++++++.+.+.|++    +|+ +....+. |.|+++++
T Consensus       345 l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~~-g~~~~~~~  393 (449)
T 2cjg_A          345 LEVIEA-EGLFERAVQHGKYLRARLDELAADFPAVVLDPRGR-GLMCAFSL  393 (449)
T ss_dssp             HHHHHH-HTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEEEEE-TTEEEEEC
T ss_pred             HHHHHh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEeec-cEEEEEEE
Confidence            543211 12567777788888877764    454 5443444 44555553

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.88  E-value=3.3e-21  Score=179.01  Aligned_cols=157  Identities=20%  Similarity=0.165  Sum_probs=127.9

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH----HhcCceeEEe-ec
Q 019298           79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHF-DL  153 (343)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~-~~  153 (343)
                      ..++++.++++++.        +..++++++++++..++++++++||+|+++.++|..+...+    ...|.+++.+ +.
T Consensus        60 ~~~l~~~la~~~g~--------~~~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  131 (421)
T 2ctz_A           60 VDVLEKRLAALEGG--------KAALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSRE  131 (421)
T ss_dssp             HHHHHHHHHHHHTC--------SEEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTT
T ss_pred             HHHHHHHHHHHhCC--------CceEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCC
Confidence            47899999999832        23455555699999999999999999999999998876654    6779988887 54


Q ss_pred             CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCC-CccccCCCCCCcccccC
Q 019298          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVY-GHLVFGDKPFVPMGVFG  232 (343)
Q Consensus       154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay-~~~~~~~~~~~~~~~~~  232 (343)
                      +       |++++++++++++++|++++|+||||.+.+   +++|.++|+++|+++|+|++| +.. +...   ++ .. 
T Consensus       132 ~-------d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~g-~~~~---~~-~~-  195 (421)
T 2ctz_A          132 E-------RPEEFLALTDEKTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGG-YLLR---PL-AW-  195 (421)
T ss_dssp             C-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGG-TSCC---GG-GG-
T ss_pred             C-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccc-ccCC---cc-cc-
Confidence            2       799999999888999999999999999987   788899999999999999999 543 2221   11 11 


Q ss_pred             CCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298          233 STVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (343)
Q Consensus       233 ~~~~~i~~~S~sK~~~~~G~r~G~i~~~~  261 (343)
                        +..++++|+||.++++|.|+|++++.+
T Consensus       196 --~~Di~~~s~~K~l~~~g~~~G~~~~~~  222 (421)
T 2ctz_A          196 --GAALVTHSLTKWVGGHGAVIAGAIVDG  222 (421)
T ss_dssp             --TCSEEEEETTTTTTCSSCCCCEEEEEC
T ss_pred             --CCeEEEECCcccccCCCCcEEEEEEec
Confidence              234999999999999999999988863

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}

Probab=99.88  E-value=2.5e-21  Score=183.72  Aligned_cols=268  Identities=13%  Similarity=0.110  Sum_probs=180.9

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh----c------
Q 019298           52 HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL----S------  121 (343)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l----~------  121 (343)
                      +.++.+.+++.....+.....|.......++++.+.+++.+.+|.+ ..+.+++|+|+++++..++.++    .      
T Consensus       111 ~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~-~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~  189 (497)
T 2qma_A          111 PLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLS-EKADGIFTSGGTQSNQMGLMLARDWIADKLSGH  189 (497)
T ss_dssp             CBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCC-TTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             CcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCC-CCCCeEEcCCchHHHHHHHHHHHHHHHHhhccc
Confidence            4667777777555444334456554466788888888888777653 2379999999999999988873    2      


Q ss_pred             ---CC------CC-eEEEeCCCCcchHHHHHhcCc---eeEEeecCCCCCCCCCHHHHHhhhcCC----ce--EEEEeCC
Q 019298          122 ---RP------GA-NILLPRPGFPIYELSAAFRHI---EVRHFDLLPDKGWEVDLDDIESLADQN----TV--ALVIINP  182 (343)
Q Consensus       122 ---~~------gd-~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~----~~--~i~~~~p  182 (343)
                         .+      |+ .|+++.++|..+...+...|.   +++.++++  .++.+|+++|++++++.    ++  +++++.+
T Consensus       190 ~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~  267 (497)
T 2qma_A          190 SIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDAN--ADGTMDITKLDEVIAQAKAEGLIPFAIVGTAG  267 (497)
T ss_dssp             CHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBS
T ss_pred             chhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecC--CCCcCCHHHHHHHHHHHHHCCCcceEEEEcCC
Confidence               12      46 799999999999988888876   68888875  45789999999988642    33  7788899


Q ss_pred             CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCC-cccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298          183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (343)
Q Consensus       183 ~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~-~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~  261 (343)
                      +||||..   +++++|+++|++||+++++|++|+.+..... .. .+..+.  ...+++.|++|.++.+ .++|++++++
T Consensus       268 ~~~tG~~---~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~--~~D~i~~s~hK~l~~p-~~~G~l~~~~  340 (497)
T 2qma_A          268 TTDHGAI---DDLDFIADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGVE--RAHSISVDFHKLFYQT-ISCGALLVND  340 (497)
T ss_dssp             CTTTCCB---CCHHHHHHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTGG--GCSEEEEETTTTTCCC-SSCEEEEESC
T ss_pred             CCCCCCC---CCHHHHHHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCcc--cCCEEEEcchhccCCC-cceEEEEEeC
Confidence            9999998   6688999999999999999999998765332 11 111111  2237788999997766 6899999875


Q ss_pred             CCCCCCchHHHHHHhhhhcc-ccC----c-------------chHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhc
Q 019298          262 PCGMFRKPKVVERMKKYFDI-LGD----P-------------ATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYK  323 (343)
Q Consensus       262 ~~~~~~~~~~~~~l~~~~~~-~~~----~-------------~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~  323 (343)
                      +.       .++.+...... ...    +             ..+.+.++ ...+. ...+.+..+++.++++.+.+.|+
T Consensus       341 ~~-------~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~-l~~lg-~~g~~~~~~~~~~~a~~l~~~L~  411 (497)
T 2qma_A          341 KS-------NFKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMT-MQNVG-PKALGDMYDHLLAQTLEVADMIR  411 (497)
T ss_dssp             GG-------GGGGGCC--------------------CCSCCCTHHHHHHH-HHHTC-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HH-------HHHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHHHH-HHHhC-HHHHHHHHHHHHHHHHHHHHHHh
Confidence            33       12222110000 000    0             11222222 12221 12223377888899999999999


Q ss_pred             CCCCceee-CCCCceE
Q 019298          324 LIPELINF-KSTGSSL  338 (343)
Q Consensus       324 ~~~g~~~~-~~~~g~~  338 (343)
                      ++|++++. .|+.+++
T Consensus       412 ~~~~~~~~~~~~~~~v  427 (497)
T 2qma_A          412 TNDQFELLAEPSLSTV  427 (497)
T ss_dssp             TCTTEEECSCCSSSEE
T ss_pred             hCCCeEEEcCCCceEE
Confidence            98899864 4555543

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*

Probab=99.88  E-value=2.1e-21  Score=183.81  Aligned_cols=269  Identities=7%  Similarity=0.007  Sum_probs=186.5

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-------CCcEEEecChHHHHHHHHHHhcCC---
Q 019298           54 THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-------PNDVFVTSGCTQAIDVAMALLSRP---  123 (343)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-------~~~i~~~~g~~~al~~~~~~l~~~---  123 (343)
                      +..+.+.+..++.. ....|....+..++++.+++++.+.+|.+..       ...+++|+|+++++..++.++..+   
T Consensus        87 ~~~~~~~~~~~~n~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~  165 (486)
T 1js3_A           87 PAMLADMLCGAIGC-IGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVR  165 (486)
T ss_dssp             HHHHHHHHHHHHCC-CCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCc-CccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhh
Confidence            44567777777643 3345666566789999999999988886532       357899999999999988776321   


Q ss_pred             ------CC----------eEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCc------eEEEEeC
Q 019298          124 ------GA----------NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT------VALVIIN  181 (343)
Q Consensus       124 ------gd----------~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~i~~~~  181 (343)
                            ||          .|+++.++|..+...++..|++++.++++  .++.+|+++|++++++++      .++++++
T Consensus       166 ~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d--~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~  243 (486)
T 1js3_A          166 RLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVVATL  243 (486)
T ss_dssp             HHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEB
T ss_pred             hhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecC--CCCCCCHHHHHHHHHHHHhCCCCceEEEEeC
Confidence                  32          37889999999999999999999999875  467899999999987644      3788899


Q ss_pred             CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCc-ccccCCCCCEEEEccCccccCCCCCcEEEEEEe
Q 019298          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT  260 (343)
Q Consensus       182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~-~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~  260 (343)
                      |+||||.+   +++++|+++|++||+++++|++|+.+.+....... +..+..  -..++.|++|.++.+ .++|++++.
T Consensus       244 ~~n~tG~~---~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~--adsi~~~~hK~~~~p-~~~G~l~~~  317 (486)
T 1js3_A          244 GTTSCCSF---DNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEF--ADSFNFNPHKWLLVN-FDCSAMWVK  317 (486)
T ss_dssp             SCTTTCCB---CCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGG--CSEEEECHHHHSSCC-SSCEEEEES
T ss_pred             CCCCCCCC---CCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccc--cCeeEEchhhhcCCC-cceEEEEEe
Confidence            99999988   78899999999999999999999986543221111 111111  125567899997765 889999996


Q ss_pred             CCCCCCCchHH-HHHHhhh---h-c-----------------cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHH
Q 019298          261 DPCGMFRKPKV-VERMKKY---F-D-----------------ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSC  318 (343)
Q Consensus       261 ~~~~~~~~~~~-~~~l~~~---~-~-----------------~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~  318 (343)
                      ++       .. .+.+...   . .                 .......+.+.++ ...+.. ..+-+..++..++++.+
T Consensus       318 ~~-------~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~a-l~~~g~-~g~~~~~~~~~~~a~~l  388 (486)
T 1js3_A          318 RR-------TDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFV-FRMYGV-KGLQAYIRKHVQLSHEF  388 (486)
T ss_dssp             CH-------HHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred             CH-------HHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHH-HHHHhH-HHHHHHHHHHHHHHHHH
Confidence            52       22 2222100   0 0                 0001123333333 222211 22333778888899999


Q ss_pred             HHhhcCCCCceee-CCCCceEee
Q 019298          319 VPSYKLIPELINF-KSTGSSLKY  340 (343)
Q Consensus       319 ~~~L~~~~g~~~~-~~~~g~~~~  340 (343)
                      .+.|+++||+++. .|+.+++.|
T Consensus       389 ~~~L~~~~~~~~~~~~~~~~v~f  411 (486)
T 1js3_A          389 EAFVLQDPRFEVCAEVTLGLVCF  411 (486)
T ss_dssp             HHHHHHCTTEEECSCCCSSEEEE
T ss_pred             HHHHhcCCCeEEeCCCceeEEEE
Confidence            9999988899964 466666554

>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*

Probab=99.88  E-value=1.5e-21  Score=180.08  Aligned_cols=267  Identities=11%  Similarity=0.024  Sum_probs=167.7

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC-CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE-ecChHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE-KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV-TSGCTQ  111 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~-~~g~~~  111 (343)
                      .+..++|+.|.      .++++.+++++.+..... ....+.+  ...++.+.+.+.+.+.+|.. .+++|++ |+|+++
T Consensus        38 ~~~~~~~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~~~la~~~g~~-~~~~i~~~t~g~t~  108 (398)
T 2fyf_A           38 KPRDGRFGSGP------SKVRLEQLQTLTTTAAALFGTSHRQA--PVKNLVGRVRSGLAELFSLP-DGYEVILGNGGATA  108 (398)
T ss_dssp             SCSSCBCCSSS------CCCCHHHHHGGGTTTTTTTTSCTTSH--HHHHHHHHHHHHHHHHTTCC-TTCEEEEEETCHHH
T ss_pred             ccCCccccCCC------CCCCHHHHHHHhhcCCCccCcCcCCH--HHHHHHHHHHHHHHHHhCCC-CCceEEEeCCchhH
Confidence            34456666543      467888888887631110 0011222  11223344444444444433 3578998 999999


Q ss_pred             HHHHHHHHhcCCCCeEEEeCCCCcc-hHHHHHhc--CceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCccc
Q 019298          112 AIDVAMALLSRPGANILLPRPGFPI-YELSAAFR--HIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGN  188 (343)
Q Consensus       112 al~~~~~~l~~~gd~vl~~~p~~~~-~~~~~~~~--g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~  188 (343)
                      ++..++++++++| .+.+..+.|.. ....+...  |.+++.++.+  +++..+.     .+++++++|++++|+||||.
T Consensus       109 al~~~~~~l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~g~~~~~-----~i~~~~~~v~~~~~~nptG~  180 (398)
T 2fyf_A          109 FWDAAAFGLIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSD--PGSAPEP-----QTDPSVDVIAWAHNETSTGV  180 (398)
T ss_dssp             HHHHHHHHTCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECC--TTCCCCC-----CCCTTCSEEEEESEETTTTE
T ss_pred             HHHHHHHHhcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecC--CCCCCCc-----cccCCCCEEEEeCcCCCcce
Confidence            9999999998887 22333333321 12234555  7888888775  3333332     24567899999999999999


Q ss_pred             ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCc
Q 019298          189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK  268 (343)
Q Consensus       189 ~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~  268 (343)
                      +++.+++.++      +|+++|+|++|..+...    ..+.     +..+++.|+||.|+.+| ++||++++        
T Consensus       181 ~~~~~~i~~~------~~~~vivD~a~~~~~~~----~~~~-----~~di~~~s~sK~~~~~g-g~g~l~~~--------  236 (398)
T 2fyf_A          181 AVAVRRPEGS------DDALVVIDATSGAGGLP----VDIA-----ETDAYYFAPQKNFASDG-GLWLAIMS--------  236 (398)
T ss_dssp             ECCCCCCTTC------C-CEEEEECTTTTTTSC----CCGG-----GCSEEEECTTSTTCSCS-SEEEEEEC--------
T ss_pred             ecchHHhhhh------cCCeEEEEeccccCCcc----cCcc-----cCcEEEEecCcccCCCC-ceEEEEEC--------
Confidence            9987776654      79999999999875321    1111     13388999999999886 59999885        


Q ss_pred             hHHHHHHhhh----------------------hccccCcchHHHHHHHhccchhhHH---HHHHHHHHHHHHHHHHHhhc
Q 019298          269 PKVVERMKKY----------------------FDILGDPATFIQVCIMYGCLSTIMQ---IMIHGNFLENFAGSCVPSYK  323 (343)
Q Consensus       269 ~~~~~~l~~~----------------------~~~~~~~~~~~~~a~~~~~l~~~~~---~l~~~~~~~~~~~~~~~~L~  323 (343)
                      ++++++++..                      .....+++...+.++ .++|....+   +-+.+++++++++.+.+.|+
T Consensus       237 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~-~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~  315 (398)
T 2fyf_A          237 PAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALL-AEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQ  315 (398)
T ss_dssp             HHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHH-HHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHH-HHHHHHHHHccCHHHHHHHHHHHHHHHHHHHH
Confidence            3566666321                      011234555555555 445543222   33478889999999999999


Q ss_pred             CCCCceeeC--C--CCceEeeec
Q 019298          324 LIPELINFK--S--TGSSLKYLD  342 (343)
Q Consensus       324 ~~~g~~~~~--~--~~g~~~~~~  342 (343)
                      ++||+.+..  |  .+++++|++
T Consensus       316 ~~~g~~~~~~~~~~~~~~~~~~~  338 (398)
T 2fyf_A          316 ERPYTTPFVTDPGLRSQVVGTID  338 (398)
T ss_dssp             HSTTEEESCCSGGGBCSSEEEEE
T ss_pred             HcCCceeccCChhhcCCcEEEEE
Confidence            888888653  4  345588775

>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*

Probab=99.87  E-value=7.8e-20  Score=168.07  Aligned_cols=244  Identities=14%  Similarity=0.091  Sum_probs=171.4

Q ss_pred             CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-------cCCC
Q 019298           52 HTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-------SRPG  124 (343)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-------~~~g  124 (343)
                      ..++++.+++.+++...   .|.+..+..++|+.++++++        .+++++++++++++..+++++       .++|
T Consensus        12 ~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g   80 (390)
T 3b8x_A           12 TWDDLEYKAIQSVLDSK---MFTMGEYVKQYETQFAKTFG--------SKYAVMVSSGSTANLLMIAALFFTKKPRLKKG   80 (390)
T ss_dssp             CCCHHHHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHTTSSSSCSCCTT
T ss_pred             CCCHHHHHHHHHHHHcC---CCCCChHHHHHHHHHHHHHC--------CCcEEEECCHHHHHHHHHHHHHhhhhcCCCCc
Confidence            45788888998888652   35556678999999999993        236777888889999999998       7889


Q ss_pred             CeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298          125 ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (343)
Q Consensus       125 d~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~  204 (343)
                      |+|+++.|+|..+...++..|.+++.++++++ ++.+|+++|++.++++++++++++   ++|..   .++++|.++|++
T Consensus        81 ~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~---~~~~~i~~l~~~  153 (390)
T 3b8x_A           81 DEIIVPAVSWSTTYYPLQQYGLRVKFVDIDIN-TLNIDIESLKEAVTDSTKAILTVN---LLGNP---NNFDEINKIIGG  153 (390)
T ss_dssp             CEEEEESSSCHHHHHHHHHTTCEEEEECBCTT-TCSBCHHHHHHHCCTTEEEEEEEC---GGGCC---CCHHHHHHHHTT
T ss_pred             CEEEECCCCcHHHHHHHHHcCCEEEEEecCcc-ccCcCHHHHHHHhCcCCeEEEEEC---CccCh---hhHHHHHHHHHH
Confidence            99999999999999999999999999988653 478999999999988888888874   45555   568899999999


Q ss_pred             cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEcc--CccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccc
Q 019298          205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS--LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDIL  282 (343)
Q Consensus       205 ~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S--~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~  282 (343)
                      +|+++|+|++|+......     ...++... ++.+.|  .+|.++ +| +.|++++++       +++.++++......
T Consensus       154 ~~~~li~D~a~~~g~~~~-----~~~~g~~~-~~~~~s~~~~k~~~-~g-~gG~~~~~~-------~~l~~~~~~~~~~g  218 (390)
T 3b8x_A          154 RDIILLEDNCESMGATFN-----NKCAGTFG-LMGTFSSFYSNHIA-TM-EGGCIVTDD-------EEIYHILLCIRAHG  218 (390)
T ss_dssp             SCCEEEEECTTCTTCEET-----TEETTSSS-SEEEEECCTTSSSC-SS-SCEEEEESC-------HHHHHHHHHHTBTT
T ss_pred             cCCEEEEECcCcccCEEC-----Cccccccc-ceEEEEccCCCCCc-cC-CceEEEeCC-------HHHHHHHHHHHhcC
Confidence            999999999999532211     11111111 133323  345543 23 348888853       34555554332100


Q ss_pred             --------------------------------cCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298          283 --------------------------------GDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN  330 (343)
Q Consensus       283 --------------------------------~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~  330 (343)
                                                      ...+.+..+++ .+.+   ..+-+..++.+++++.+.+.|+++||+.+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~-l~~l---~~l~~~~~~~~~~~~~l~~~L~~~~~~~~  294 (390)
T 3b8x_A          219 WTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIG-IEQL---KKLPRFISVRRKNAEYFLDKFKDHPYLDV  294 (390)
T ss_dssp             BSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHHTTCSSEEE
T ss_pred             CCccccccccccccccccccccccceeccccccCcCHHHHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHhcCCCCccc
Confidence                                            11344444433 2222   22223777788889999999998888876


Q ss_pred             eC
Q 019298          331 FK  332 (343)
Q Consensus       331 ~~  332 (343)
                      ..
T Consensus       295 ~~  296 (390)
T 3b8x_A          295 QQ  296 (390)
T ss_dssp             CC
T ss_pred             CC
Confidence            44

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}

Probab=99.86  E-value=1.3e-19  Score=172.54  Aligned_cols=252  Identities=11%  Similarity=0.049  Sum_probs=174.0

Q ss_pred             CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc-------C-CCC------eEEEeCCCCcc
Q 019298           71 NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-------R-PGA------NILLPRPGFPI  136 (343)
Q Consensus        71 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-------~-~gd------~vl~~~p~~~~  136 (343)
                      ..|...++..++++.+.+++.+.+|.  +++++++++|+++++..++..+.       + +|+      +|+++.++|+.
T Consensus       138 ~~~~~s~~~~~le~~~~~~la~l~g~--~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s  215 (515)
T 2jis_A          138 YTYEIAPVFVLMEEEVLRKLRALVGW--SSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYS  215 (515)
T ss_dssp             TCTTTCHHHHHHHHHHHHHHHHHHTC--SSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTH
T ss_pred             CchhhchHHHHHHHHHHHHHHHHhCC--CCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHH
Confidence            35665556667777777777666554  37899999999999998888763       2 575      89999999999


Q ss_pred             hHHHHHhcCc---eeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCc
Q 019298          137 YELSAAFRHI---EVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKT  207 (343)
Q Consensus       137 ~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~  207 (343)
                      +...++..|.   +++.++++  .++.+|+++|++++++      ++++|++++|+||||.+   +++++|+++|+++|+
T Consensus       216 ~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i---~~l~~I~~la~~~g~  290 (515)
T 2jis_A          216 IQKGAAFLGLGTDSVRVVKAD--ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAF---DPLEAIADVCQRHGL  290 (515)
T ss_dssp             HHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCB---CCHHHHHHHHHHHTC
T ss_pred             HHHHHHHcCCCCCcEEEEecC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCc---cCHHHHHHHHHHcCC
Confidence            9999998888   78888775  3577999999998865      37889999999999999   457888999999999


Q ss_pred             EEEEccCCCccccCCCCCC-cccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh----hh-c-
Q 019298          208 LVIADEVYGHLVFGDKPFV-PMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK----YF-D-  280 (343)
Q Consensus       208 ~~i~D~ay~~~~~~~~~~~-~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~----~~-~-  280 (343)
                      ++++|++|+.+........ .+..+.  ...+++.|++|.++.+ .++|++++.++.      ++.++...    .. . 
T Consensus       291 ~l~vD~a~~~~~~~~~~~~~~~~g~~--~aD~v~~s~hK~l~~p-~g~G~l~~~~~~------~~~~~~~~~~~~yl~~~  361 (515)
T 2jis_A          291 WLHVDAAWGGSVLLSQTHRHLLDGIQ--RADSVAWNPHKLLAAG-LQCSALLLQDTS------NLLKRCHGSQASYLFQQ  361 (515)
T ss_dssp             EEEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEEEEESCCS------CHHHHHHCC--------
T ss_pred             eEEEehhhhhHHHhChhhHhhcCCCc--cCCEEEECcccccCCC-CCeeEEEEeChH------HHHHHHhcCCchhccCC
Confidence            9999999998765433211 111111  2238889999997654 568999997641      13332110    00 0 


Q ss_pred             ----------------cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeC-CCCceEee
Q 019298          281 ----------------ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFK-STGSSLKY  340 (343)
Q Consensus       281 ----------------~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~-~~~g~~~~  340 (343)
                                      .......+.+.++ ..++.. ..+-+..++..++++++.+.|+++||+++.. |..+.+.|
T Consensus       362 ~~~~~~~~~~~~~~~~~~rr~~al~~~~~-l~~lg~-~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f  436 (515)
T 2jis_A          362 DKFYDVALDTGDKVVQCGRRVDCLKLWLM-WKAQGD-QGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCF  436 (515)
T ss_dssp             -CCSCGGGCCGGGCSCSSCCCCHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEE
T ss_pred             cccccccCCCCCCCCCCCCcccHHHHHHH-HHHHhH-HHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEEEE
Confidence                            0001112333333 222221 2233377888899999999999988998644 44555544

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9

Probab=99.86  E-value=3.4e-21  Score=180.78  Aligned_cols=243  Identities=11%  Similarity=0.016  Sum_probs=163.9

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEecChH-HHHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhcCceeEEeecCC
Q 019298           79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT-QAIDVAMALLSR--PGANILLPRPGFPIYELSAAFRHIEVRHFDLLP  155 (343)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~-~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~  155 (343)
                      ..++.+.+.+++.+.+|.  +++ +++|+|++ .++..++.++..  +|+.|++++++|..+...++..|++++.++..+
T Consensus       131 ~~~~~~~~~~~la~~~g~--~~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~  207 (456)
T 2z67_A          131 MYALTNKILESFFKQLGL--NVH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVL  207 (456)
T ss_dssp             HHHHHHHHHHHHHHHTTC--CCE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEE
T ss_pred             HHHHHHHHHHHHHHHcCC--CCC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEec
Confidence            345556666666665554  344 99999999 566545555433  678899999999999999999999999887643


Q ss_pred             -CCCCCCCHHHHHhhh-c----CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccc
Q 019298          156 -DKGWEVDLDDIESLA-D----QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG  229 (343)
Q Consensus       156 -~~~~~~d~~~l~~~~-~----~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~  229 (343)
                       ++++.+|+++|++++ +    .++.++++++|+||||.+   +++++|+++|+++|+++++|++|+.+..+-.+ ....
T Consensus       208 ~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i---~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~-~~~~  283 (456)
T 2z67_A          208 DGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNS---DDIVEIAKICENYDIPHIINGAYAIQNNYYLE-KLKK  283 (456)
T ss_dssp             ETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHHHHH-HHHH
T ss_pred             cCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCc---CCHHHHHHHHHHcCCcEEEECcchHHHHHhhH-HHHH
Confidence             356789999999998 4    356677789999999999   56788888999999999999999876542110 0111


Q ss_pred             ccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcccc-CcchHHHHHHHhccchhhHHHHHHH
Q 019298          230 VFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG-DPATFIQVCIMYGCLSTIMQIMIHG  308 (343)
Q Consensus       230 ~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~a~~~~~l~~~~~~l~~~  308 (343)
                      .+.. ...+++.|++|.+ ..+.++||+++.+       +++++++........ ..+...+.+. ...+. ...+.+.+
T Consensus       284 ~~~~-~~D~~~~s~hK~~-~~p~g~G~l~~~~-------~~~~~~l~~~~~g~~~~~~~~~~~aa-l~~l~-~~~~~~~~  352 (456)
T 2z67_A          284 AFKY-RVDAVVSSSDKNL-LTPIGGGLVYSTD-------AEFIKEISLSYPGRASATPVVNTLVS-LLSMG-SKNYLELV  352 (456)
T ss_dssp             HHTS-CCSEEEEEHHHHH-CCCSSCEEEEESC-------HHHHHHHHTTSCSCBCSHHHHHHHHH-HHHHH-HHHHHHHH
T ss_pred             hhCC-CCCEEEEcCCCCc-CCCCCeEEEEEcC-------HHHHhhcCcCCCCCCCCCHHHHHHHH-HHHHH-HHHHHHHH
Confidence            1111 1226789999974 4558899999843       457776644322111 1223333333 12221 12233378


Q ss_pred             HHHHHHHHHHHHhhcCCC---CceeeCCCCceEeee
Q 019298          309 NFLENFAGSCVPSYKLIP---ELINFKSTGSSLKYL  341 (343)
Q Consensus       309 ~~~~~~~~~~~~~L~~~~---g~~~~~~~~g~~~~~  341 (343)
                      ++..++++++.+.|++++   |+.+..|+  .++++
T Consensus       353 ~~~~~~~~~l~~~L~~~~~~~g~~v~~~~--~~v~~  386 (456)
T 2z67_A          353 KNQKNSKKLLDELLNDLSKKTGGKFLDVE--SPIAS  386 (456)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSSCCBCCCC--CSSEE
T ss_pred             HHHHHHHHHHHHHHHhcccccCCEecCCC--CeEEE
Confidence            888899999999998875   77665666  44443

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A

Probab=99.85  E-value=4e-20  Score=173.56  Aligned_cols=284  Identities=14%  Similarity=0.061  Sum_probs=168.3

Q ss_pred             ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC---CC---CHHHHHHHHHHHhhhCCCCCCCCc---EEEe
Q 019298           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT---AG---LPLTRRAIAEYLSRDLPYKLTPND---VFVT  106 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~---~g---~~~lr~~ia~~~~~~~~~~~~~~~---i~~~  106 (343)
                      ..+.|..+.      ..+++.+++++...+.+....+|+..   .|   ..++++...+.+.+.+|  .+.+.   .+++
T Consensus        55 ~~i~lias~------n~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g--~~~~~~~~~v~~  126 (490)
T 2a7v_A           55 RGLELIASE------NFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFD--LDPAQWGVNVQP  126 (490)
T ss_dssp             HSEECCTTC------CCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTT--CCTTTEEEECCC
T ss_pred             cCceEECCC------CCCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcC--CCcccCceEEeC
Confidence            557776543      23689999999888765332344321   12   24666444444444343  34432   3455


Q ss_pred             cChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH--------HHHhcCceeE--EeecCCCCCCCCCHHHHHhhhc-CCce
Q 019298          107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYEL--------SAAFRHIEVR--HFDLLPDKGWEVDLDDIESLAD-QNTV  175 (343)
Q Consensus       107 ~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~--~~~~~~~~~~~~d~~~l~~~~~-~~~~  175 (343)
                      +|+++++..++.++++|||+|++.++.|.++..        .+...|..+.  .+++++ .++.+|++++++.++ .+++
T Consensus       127 ~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~-~~~~iD~d~le~~l~~~~~k  205 (490)
T 2a7v_A          127 YSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNP-KTGLIDYNQLALTARLFRPR  205 (490)
T ss_dssp             SSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCT-TTCSBCHHHHHHHHHHHCCS
T ss_pred             CchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEeccccc-ccCCcCHHHHHHHHhhcCCc
Confidence            678999999999999999999999999865321        2234454433  344333 346899999999886 3688


Q ss_pred             EEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCC-ccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE
Q 019298          176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG-HLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL  254 (343)
Q Consensus       176 ~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~-~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~  254 (343)
                      +++++.++||+..     ++++|.++|++||+++++|++|. ++...+..+.++.     .-.+++.|+||++  .|.|.
T Consensus       206 lIi~~~s~~~~~~-----dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~-----~aDiv~~S~hK~l--~Gp~G  273 (490)
T 2a7v_A          206 LIIAGTSAYARLI-----DYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK-----HADIVTTTTHKTL--RGARS  273 (490)
T ss_dssp             EEEECCSSCCSCC-----CHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG-----TCSEEEEESSGGG--CSCSC
T ss_pred             EEEEcCCCCCCcc-----cHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC-----CCCEEEECCcccC--ccccc
Confidence            8888888888532     47889999999999999999976 3443333222332     1238899999996  46678


Q ss_pred             EEEEEeCCCCCCCch--------HHHHHHhhhhc-c-ccCcchHHHHHHHhccchhh--HHHHHHHHHHHHHHHHHHHhh
Q 019298          255 GWFVTTDPCGMFRKP--------KVVERMKKYFD-I-LGDPATFIQVCIMYGCLSTI--MQIMIHGNFLENFAGSCVPSY  322 (343)
Q Consensus       255 G~i~~~~~~~~~~~~--------~~~~~l~~~~~-~-~~~~~~~~~~a~~~~~l~~~--~~~l~~~~~~~~~~~~~~~~L  322 (343)
                      |+++++++. +..++        ++.++++.... . .++++....+++ ..++...  .++-+.++++.++++.+.+.|
T Consensus       274 G~i~~~~~~-~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAl-a~Al~~~~~~~~~~~~~~~~~na~~L~~~L  351 (490)
T 2a7v_A          274 GLIFYRKGV-KAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAV-AVALKQACTPMFREYSLQVLKNARAMADAL  351 (490)
T ss_dssp             EEEEEECSE-EEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHH-HHHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hheeeccch-hcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHH-HHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence            999987631 00000        24455554432 1 223344433443 3344322  244447888999999999999


Q ss_pred             cCCCCceeeC-CCCceEeeecC
Q 019298          323 KLIPELINFK-STGSSLKYLDL  343 (343)
Q Consensus       323 ~~~~g~~~~~-~~~g~~~~~~l  343 (343)
                      .+. |+.+.. +...+++|+++
T Consensus       352 ~~~-G~~v~~~~t~t~lv~vdl  372 (490)
T 2a7v_A          352 LER-GYSLVSGGTDNHLVLVDL  372 (490)
T ss_dssp             HHT-TCEEGGGSCSSSEEEEEC
T ss_pred             HHc-CcEEecCCCCCeEEEEEe
Confidence            987 888643 35567888764

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}

Probab=99.85  E-value=1.2e-19  Score=171.32  Aligned_cols=310  Identities=8%  Similarity=-0.001  Sum_probs=202.9

Q ss_pred             CcCccccHHHHHHHHHhhccccccccceeEeccCCCCC-CCC-CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 019298           10 NTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTV-HSC-FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIA   87 (343)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia   87 (343)
                      +|....+...++..+.+...     .......++..-. .+. ...+..+.+.+..++.. ....|...++..++++.++
T Consensus        51 ~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~n~-~~~~~~~~p~~~~lE~~v~  124 (481)
T 4e1o_A           51 APEDPDSWDSIFGDIERIIM-----PGVVHWQSPHMHAYYPALTSWPSLLGDMLADAINC-LGFTWASSPACTELEMNVM  124 (481)
T ss_dssp             CCSSCCCHHHHHHHHHHHTG-----GGCCCTTSTTBCSSSCCCCCHHHHHHHHHHHHHCC-CCSSTTTCHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHh-----cCCCCCCCCCeeEeCCCCCCHHHHHHHHHHHHhCc-ccCCcCCCcHHHHHHHHHH
Confidence            34445567777777766552     1222222221100 011 12334455666666654 3457877778899999999


Q ss_pred             HHHhhhCCCCCCC--------CcEEEecChHHHHHHHHHHhcC-------------------CCCeEEEeCCCCcchHHH
Q 019298           88 EYLSRDLPYKLTP--------NDVFVTSGCTQAIDVAMALLSR-------------------PGANILLPRPGFPIYELS  140 (343)
Q Consensus        88 ~~~~~~~~~~~~~--------~~i~~~~g~~~al~~~~~~l~~-------------------~gd~vl~~~p~~~~~~~~  140 (343)
                      +|+.+.+|.+...        ...++|+|+++++..++.+..+                   +++.|+++.++|..+...
T Consensus       125 ~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~  204 (481)
T 4e1o_A          125 DWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEKA  204 (481)
T ss_dssp             HHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHH
T ss_pred             HHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHHHHH
Confidence            9999887765332        3678999999999888876632                   567999999999999999


Q ss_pred             HHhcCceeEEeecCCCCCCCCCHHHHHhhhcCC------ceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccC
Q 019298          141 AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN------TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEV  214 (343)
Q Consensus       141 ~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~a  214 (343)
                      +...|.+++.++++  .++.+|+++|++++++.      +.+++++.++|+||.+   +++++|+++|++||+++++|.+
T Consensus       205 ~~~~g~~~~~v~~~--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~i---d~l~~I~~la~~~~~~lhvDaA  279 (481)
T 4e1o_A          205 GLISLVKMKFLPVD--DNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAF---DCLSELGPICAREGLWLHIDAA  279 (481)
T ss_dssp             HHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCB---CCHHHHHHHHHHHTCEEEEECT
T ss_pred             HHhCCCceEEEEcC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCc---CCHHHHHHHHHHcCCeEEeehh
Confidence            99999999999874  56789999999998653      5677888999999998   7789999999999999999999


Q ss_pred             CCccccCCCCCCc-ccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH-Hhhhhcc-----------
Q 019298          215 YGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER-MKKYFDI-----------  281 (343)
Q Consensus       215 y~~~~~~~~~~~~-~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~-l~~~~~~-----------  281 (343)
                      |+........... .....  .-..++.+++|.++.+ ..+|++++.+       +....+ +......           
T Consensus       280 ~g~~~~~~~~~~~~~~gi~--~aDsi~~~~hK~l~~p-~g~g~l~~~~-------~~~l~~~~~~~~~yl~~~~~~~~~~  349 (481)
T 4e1o_A          280 YAGTAFLCPEFRGFLKGIE--YADSFTFNPSKWMMVH-FDCTGFWVKD-------KYKLQQTFSVNPIYLRHANSGVATD  349 (481)
T ss_dssp             TGGGGGGSGGGGGGGTTGG--GCSEEEECHHHHSSCC-SSCEEEEESB-------HHHHHTTTCCCCGGGCCTTTTTSCC
T ss_pred             hHHHHHhChhhHHHhcCcc--cCCEEEEChHHhcCCC-CceEEEEEeC-------HHHHHHHhcCCchhccCcccCCCCC
Confidence            9986433221111 11111  1126678999997765 4467777754       233221 1100000           


Q ss_pred             --------ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298          282 --------LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD  342 (343)
Q Consensus       282 --------~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~  342 (343)
                              ......+.+.++ ...+. ...+-+..++..++++++.+.|+++||+++..+...++++++
T Consensus       350 ~~~~~~~~~r~~~~l~~~~a-l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~  416 (481)
T 4e1o_A          350 FMHWQIPLSRRFRSVKLWFV-IRSFG-VKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFR  416 (481)
T ss_dssp             GGGGSSSSCCCCTHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHTCTTEECCSCCCSSEEEEE
T ss_pred             cccccccCCCCccHHHHHHH-HHHhH-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEE
Confidence                    000122333333 12221 122333788889999999999999999997666555555553

>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*

Probab=99.76  E-value=3.8e-23  Score=193.07  Aligned_cols=277  Identities=17%  Similarity=0.046  Sum_probs=183.3

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++.+|||..|....  .++ .+|.+.+++.+++.......|+. ....+|.+.+++++      + ..+.+++++|+++
T Consensus        98 dG~~yiD~~~~~~~~--~lGh~~p~V~~Av~~q~~~~~~~~~~~-~~~~~Lae~L~~~~------p-~~~~v~~~nSGse  167 (465)
T 2yky_A           98 DGHAYVNFLGEYTAG--LFGHSHPVIRAAVERALAVGLNLSTQT-ENEALFAEAVCDRF------P-SIDLVRFTNSGTE  167 (465)
Confidence            388899999887431  233 68999999999887643334533 44567777777776      2 4578999999999


Q ss_pred             HHHHHHHHhc--CCCCeEEEeCCCCcchHHHHH----hcCc--eeEEeecCCCCCCCCCHHHHHhhhc---CCceEEEEe
Q 019298          112 AIDVAMALLS--RPGANILLPRPGFPIYELSAA----FRHI--EVRHFDLLPDKGWEVDLDDIESLAD---QNTVALVII  180 (343)
Q Consensus       112 al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~----~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~i~~~  180 (343)
                      ++..+++.+.  ..+++|++.+++|.++...+.    ..|.  .+..++.       -|+++|++.++   +++++|++.
T Consensus       168 A~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-------~d~~~l~~~l~~~~~~~aavi~e  240 (465)
T 2yky_A          168 ANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-------NDVEGTADLLKRHGHDCAAILVE  240 (465)
Confidence            9999998753  345899999999987655433    1122  1222221       26888888887   456666654


Q ss_pred             CCCCCccccc-CHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298          181 NPGNPCGNVY-SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT  259 (343)
Q Consensus       181 ~p~nptG~~~-~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~  259 (343)
                      ..++++|.+. +.+.+++|.++|++||+++|+||+|. +..+ . ......+   +...-+.||||.++. |+|+||+++
T Consensus       241 pv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g-~-~~a~~~~---gv~pDi~t~sK~lg~-G~piG~v~~  313 (465)
T 2yky_A          241 PMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLS-G-GGAQEML---GISADLTTLGKYIGG-GMSFGAFGG  313 (465)
Confidence            4366799654 67889999999999999999999999 6432 1 1111111   112334589999886 999999998


Q ss_pred             eCCCCCCCchHHHHHHhh------hhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCC-C--Ccee
Q 019298          260 TDPCGMFRKPKVVERMKK------YFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLI-P--ELIN  330 (343)
Q Consensus       260 ~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~-~--g~~~  330 (343)
                      +.        ++++.+..      ....+++.++++++++ .+.|+...+ -+..++++++.+.+.+.|+++ .  ++..
T Consensus       314 ~~--------~i~~~l~~~~~g~~~~~~T~~~npla~aAa-~aaL~~l~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~  383 (465)
T 2yky_A          314 RR--------DLMERFDPARDGAFAHAGTFNNNILTMSAG-HAALTQIYT-RQAASDLSASGDRFRANLNRIAVENQAPL  383 (465)
Confidence            64        56666655      1223557788888877 555542111 125667777777777776653 1  2322


Q ss_pred             eCCCCceEeeecC
Q 019298          331 FKSTGSSLKYLDL  343 (343)
Q Consensus       331 ~~~~~g~~~~~~l  343 (343)
                      ..+..|.++|+.|
T Consensus       384 ~v~g~G~~~~i~~  396 (465)
T 2yky_A          384 QFTGLGSLGTIHF  396 (465)
Confidence            2345677777643

>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}

Probab=99.85  E-value=1.4e-20  Score=175.99  Aligned_cols=169  Identities=14%  Similarity=0.116  Sum_probs=124.4

Q ss_pred             CCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeec
Q 019298           74 APTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDL  153 (343)
Q Consensus        74 ~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~  153 (343)
                      .+.....++++.+++ ++      .+ +++++++|+++++..++++++++||+|++++|+|.++...+...|.+++.++.
T Consensus        54 ~~~~~~~~~~~~la~-~g------~~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~  125 (446)
T 2x3l_A           54 HPEEVILKSMKQVEK-HS------DY-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFIET  125 (446)
T ss_dssp             SCSSHHHHHHHHHCS-CT------TE-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEECEE
T ss_pred             CcchHHHHHHHHHHh-cC------CC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEEeC
Confidence            333445667777776 62      23 68999999999999999999999999999999999999999999999999887


Q ss_pred             CCCCC----CCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCc-cccCCCCCCcc
Q 019298          154 LPDKG----WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPM  228 (343)
Q Consensus       154 ~~~~~----~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~-~~~~~~~~~~~  228 (343)
                      ..+++    +.+|+++|   ++++++++++++ +|++|.+.+   +++|+++|++||+++|+|++|+. +.|.+. +...
T Consensus       126 ~~~~~~~~~~~~d~~~l---~~~~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f~~~-~~~~  197 (446)
T 2x3l_A          126 HQSPLTNHYNKVNLSRL---NNDGHKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGLQGF-PDST  197 (446)
T ss_dssp             EECTTTSSEEEEEC----------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTSTTS-CCCG
T ss_pred             eeccccCcCCCCCHHHH---cCCCceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhccCCC-CCCh
Confidence            32233    46788877   455788999998 566999976   67888999999999999999996 334443 2222


Q ss_pred             cccCCCCCEEEEccCccccCCCCCcEEEEEEeCC
Q 019298          229 GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP  262 (343)
Q Consensus       229 ~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~  262 (343)
                      ...+   ..+++.|+||+++ ++.++||+++++.
T Consensus       198 ~~~g---~Di~~~S~~K~l~-~~~g~g~l~~~~~  227 (446)
T 2x3l_A          198 LNYQ---ADYVVQSFHKTLP-ALTMGSVLYIHKN  227 (446)
T ss_dssp             GGGT---CSEEEECHHHHSS-SCTTCEEEEEETT
T ss_pred             HHcC---CCEEEECCccccc-cccccEEEEEcCC
Confidence            2222   2399999999633 3345899999753

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6

Probab=99.83  E-value=5.4e-19  Score=166.51  Aligned_cols=314  Identities=10%  Similarity=0.008  Sum_probs=197.2

Q ss_pred             cCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCC----CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHH
Q 019298            9 DNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSC----FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRR   84 (343)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~   84 (343)
                      .+|....+...++..+.+...     .......+  |.....    ...+..+.+.+..++..+ ...|...++..++++
T Consensus        45 ~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~--p~~~~~~~~~~~~~~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~  116 (475)
T 3k40_A           45 AAPEKPEKWQDVMQDIERVIM-----PGVTHWHS--PKFHAYFPTANSYPAIVADMLSGAIACI-GFTWIASPACTELEV  116 (475)
T ss_dssp             SCCSSCCCHHHHHHHHHHHTG-----GGCCCTTC--TTBCCSSCCCCCHHHHHHHHHHHHHCCC-SSSCCCCHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHh-----ccCCCCCC--cCceeeCCCCCcHHHHHHHHHHHHhCcc-ccCccCCcHHHHHHH
Confidence            344445567777777776552     12222222  221111    122334455566665443 346777778889999


Q ss_pred             HHHHHHhhhCCCCCCC-------CcEEEecChHHHHHHHHHHhcC-------------------CCCeEEEeCCCCcchH
Q 019298           85 AIAEYLSRDLPYKLTP-------NDVFVTSGCTQAIDVAMALLSR-------------------PGANILLPRPGFPIYE  138 (343)
Q Consensus        85 ~ia~~~~~~~~~~~~~-------~~i~~~~g~~~al~~~~~~l~~-------------------~gd~vl~~~p~~~~~~  138 (343)
                      .+++|+.+.+|.+...       ...++|+|+++++..++.+...                   ++++|+++.++|..+.
T Consensus       117 ~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~  196 (475)
T 3k40_A          117 VMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVE  196 (475)
T ss_dssp             HHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHH
T ss_pred             HHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCchHHHH
Confidence            9999999888765321       3688999999998888776521                   3468999999999999


Q ss_pred             HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCC------ceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEc
Q 019298          139 LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN------TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD  212 (343)
Q Consensus       139 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D  212 (343)
                      ..+...|.+++.++++  .++ +|+++|++++++.      +.+++++.++|+||.+   +++++|+++|++||+++++|
T Consensus       197 ~~~~~~g~~~~~v~~d--~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~---~~l~~I~~la~~~~~~lhvD  270 (475)
T 3k40_A          197 RAGLLGGVKLRSVQSE--NHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAF---DYLDECGPVGNKHNLWIHVD  270 (475)
T ss_dssp             HHHHHHTCEEEEECCB--TTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCB---CCHHHHHHHHHHTTCEEEEE
T ss_pred             HHHHHcCCceEEEECC--CCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCc---CCHHHHHHHHHHhCCeEEEe
Confidence            9999999999999875  356 9999999998653      5677888999999999   77899999999999999999


Q ss_pred             cCCCccccCCCCCCc-ccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCC----chHHHHHHh-----hhhccc
Q 019298          213 EVYGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR----KPKVVERMK-----KYFDIL  282 (343)
Q Consensus       213 ~ay~~~~~~~~~~~~-~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~----~~~~~~~l~-----~~~~~~  282 (343)
                      ++|+........... +..+.  .-..+..|++|.++.+ ..+|++++.++..+..    .+..+..-.     ......
T Consensus       271 ~A~~~~~~~~~~~~~~~~gi~--~~Ds~~~~~hK~l~~p-~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~  347 (475)
T 3k40_A          271 AAYAGSAFICPEYRHLMKGIE--SADSFNFNPHKWMLVN-FDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQ  347 (475)
T ss_dssp             CTTGGGGGGSGGGGGGGTTGG--GCSEEEECHHHHSSCC-SSCEEEEESSGGGC--------------------------
T ss_pred             HHhHHHHHhCHhhHHHhcCcc--cCCEEEECchhccCCC-CceEEEEEeCHHHHHHHhcCCccccCCCcCCCCCCccccc
Confidence            999875432221111 11111  1237788999986554 4578888876432110    000000000     000000


Q ss_pred             --cC--cchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeee
Q 019298          283 --GD--PATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYL  341 (343)
Q Consensus       283 --~~--~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~  341 (343)
                        .+  ...+.+.++ ...+. ...+-+..++..++.+++.+.|+++||+++..+.....+++
T Consensus       348 ~~~sr~~~~l~l~~a-l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~~~~iv~f  408 (475)
T 3k40_A          348 IPLGRRFRALKLWFV-LRLYG-VENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCF  408 (475)
T ss_dssp             -CCCGGGTHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCCBTTEEEE
T ss_pred             ccCCCcccHHHHHHH-HHHHh-HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEE
Confidence              00  012222222 11111 12233378888899999999999999999765554444444

>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*

Probab=99.81  E-value=3.5e-19  Score=174.40  Aligned_cols=241  Identities=14%  Similarity=0.038  Sum_probs=158.4

Q ss_pred             CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH-HHhcCceeEEeecCC
Q 019298           77 AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS-AAFRHIEVRHFDLLP  155 (343)
Q Consensus        77 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~-~~~~g~~~~~~~~~~  155 (343)
                      .-..++++.+|++++      .+ ..+++++|+++++..++.+++++||+|+++.++|.++... +...|++++.++...
T Consensus       173 ~~i~e~e~~lA~~~g------ae-~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~  245 (730)
T 1c4k_A          173 GPAVAAEKHAARVYN------AD-KTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNR  245 (730)
T ss_dssp             THHHHHHHHHHHHTT------CS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEE
T ss_pred             HHHHHHHHHHHHHHC------CC-cEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEEeCCc
Confidence            345789999999983      22 4577888889999999999999999999999999988877 788899988887643


Q ss_pred             CCCCC----CCHHHH-----HhhhcCC------c----eEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCC
Q 019298          156 DKGWE----VDLDDI-----ESLADQN------T----VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYG  216 (343)
Q Consensus       156 ~~~~~----~d~~~l-----~~~~~~~------~----~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~  216 (343)
                      + .++    +|+++|     +++++++      +    +++++++| ||+|.+.   ++++|+++|+++++++++|++|+
T Consensus       246 ~-~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~---dl~~I~~la~~~g~~livDeAh~  320 (730)
T 1c4k_A          246 N-PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIY---NAHEVVKRIGHLCDYIEFDSAWV  320 (730)
T ss_dssp             C-TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEE---CHHHHHHHHGGGBSEEEEECTTC
T ss_pred             c-ccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeec---CHHHHHHHHHHcCCeEEEEcccc
Confidence            2 233    688888     8888654      4    78999998 5899995   47888999999999999999997


Q ss_pred             cc-ccCCCC--CCcccc--cC-CCCCEEEEccCccccCCCCCcEE-EEEEeCCCC----CCCchHHHHHHhhhhccccCc
Q 019298          217 HL-VFGDKP--FVPMGV--FG-STVPILTLGSLSKRWIVPGWRLG-WFVTTDPCG----MFRKPKVVERMKKYFDILGDP  285 (343)
Q Consensus       217 ~~-~~~~~~--~~~~~~--~~-~~~~~i~~~S~sK~~~~~G~r~G-~i~~~~~~~----~~~~~~~~~~l~~~~~~~~~~  285 (343)
                      .. .+++..  ..++..  +. +..++++++|+||++  +|++.| ++.++++..    ...+............ +.++
T Consensus       321 ~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L--~g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~-stsp  397 (730)
T 1c4k_A          321 GYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQ--AGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFM-STSP  397 (730)
T ss_dssp             CGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHS--SCCTTCEEEEEECGGGTTSTTCCCHHHHHHHHHHHS-CSSC
T ss_pred             cccccCcccCCcCcccccccCCCCCCEEEEECCCCCC--CCCCCEEEEEecchhhcCcccccCHHHHHHHHHHhC-CCCC
Confidence            53 343211  111211  12 234679999999984  555554 554544320    0001111111111111 2344


Q ss_pred             chHHHHHHHhccchhhH--HHHHHHHHHHHHHHHHHHhhcC-CCCceeeCC
Q 019298          286 ATFIQVCIMYGCLSTIM--QIMIHGNFLENFAGSCVPSYKL-IPELINFKS  333 (343)
Q Consensus       286 ~~~~~~a~~~~~l~~~~--~~l~~~~~~~~~~~~~~~~L~~-~~g~~~~~~  333 (343)
                      +....+++ .+++....  ...+.++++.++.+.+++.|++ ++|+.+..|
T Consensus       398 ~~~~iaal-~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p  447 (730)
T 1c4k_A          398 FYPMYAAL-DVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVP  447 (730)
T ss_dssp             CHHHHHHH-HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSC
T ss_pred             cHHHHHHH-HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccc
Confidence            44433333 23322111  1233567777778888888877 678876544

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*

Probab=99.81  E-value=9.7e-19  Score=164.67  Aligned_cols=286  Identities=12%  Similarity=0.055  Sum_probs=178.2

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcC---CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSE---KFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g  108 (343)
                      +++.+|||..|....  .++ .+|.+.+++.+++...   ....|+. ....++++.+++.+.+..+  ...++|++++|
T Consensus        61 dG~~ylD~~~g~~~~--~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~--~~~~~v~f~~s  135 (472)
T 1ohv_A           61 DGNRMLDLYSQISSI--PIGYSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAP--KGMSQLITMAC  135 (472)
T ss_dssp             TSCEEEESSHHHHTC--SSCBTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCC--TTCCEEEEESS
T ss_pred             CCCEEEECCCCHhhc--ccCCCCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCC--CCcCEEEEeCC
Confidence            377899998887542  234 6899999998876421   1123443 3457899999997765432  35689999999


Q ss_pred             hHHHHHHHHHHhc--------C-----------------CC---CeEEEeCCCCcchHHHHHh-cCcee-----------
Q 019298          109 CTQAIDVAMALLS--------R-----------------PG---ANILLPRPGFPIYELSAAF-RHIEV-----------  148 (343)
Q Consensus       109 ~~~al~~~~~~l~--------~-----------------~g---d~vl~~~p~~~~~~~~~~~-~g~~~-----------  148 (343)
                      +++|+..+++.+.        .                 +|   +.|++.+++|+++...+.. .|...           
T Consensus       136 GseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~  215 (472)
T 1ohv_A          136 GSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDW  215 (472)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCC
T ss_pred             chhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCC
Confidence            9999999998873        1                 45   8999999999887665532 23211           


Q ss_pred             EEeecCCC-----CC--C-----CCCHHHHHhhhcC------CceEEEEeCCCCCcccc-cCHHHHHHHHHHHhhcCcEE
Q 019298          149 RHFDLLPD-----KG--W-----EVDLDDIESLADQ------NTVALVIINPGNPCGNV-YSYQHLQKLAETANKLKTLV  209 (343)
Q Consensus       149 ~~~~~~~~-----~~--~-----~~d~~~l~~~~~~------~~~~i~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~  209 (343)
                      ..++....     ..  +     ..|+++|++.+++      ++++|++...+|++|.+ .+.+.+++|.++|++||+++
T Consensus       216 ~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~ll  295 (472)
T 1ohv_A          216 PIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAF  295 (472)
T ss_dssp             CEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEE
T ss_pred             cccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEE
Confidence            11111100     00  0     1257888888865      56666665558889975 68999999999999999999


Q ss_pred             EEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchH
Q 019298          210 IADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATF  288 (343)
Q Consensus       210 i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~  288 (343)
                      |+||+|.++.+.+. ...+..++-. ...-+.||||.+ +.|   ||++ +.        ++. .+.... ..+.+.+++
T Consensus       296 i~DEv~~g~g~~g~-~~~~~~~gv~-~~~Di~t~sK~~-l~G---G~~~-~~--------~~~-~~~~~~~~~T~~~~~~  359 (472)
T 1ohv_A          296 LVDEVQTGGGSTGK-FWAHEHWGLD-DPADVMTFSKKM-MTG---GFFH-KE--------EFR-PNAPYRIFNTWLGDPS  359 (472)
T ss_dssp             EEECTTTTTTTTSS-SSGGGGGCCS-SCCSEEEECGGG-SSE---EEEE-CG--------GGS-CSSSSSSCCSSSSCHH
T ss_pred             EEeCcccCCCCCCC-chhccccCCC-CCCCEEEEcccc-ccC---CccC-ch--------hhc-ccccccccCccCccHH
Confidence            99999997665443 1122222211 001234889996 445   7766 32        221 112222 224466788


Q ss_pred             HHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCC----CC-ceeeCCCCceEeeec
Q 019298          289 IQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLI----PE-LINFKSTGSSLKYLD  342 (343)
Q Consensus       289 ~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~----~g-~~~~~~~~g~~~~~~  342 (343)
                      +++++ .++|+...+ -+..++++++++.+.+.|+++    |+ +....+. |.+++++
T Consensus       360 ~~aaa-~aal~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~-g~~~~~~  415 (472)
T 1ohv_A          360 KNLLL-AEVINIIKR-EDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGR-GTFCSFD  415 (472)
T ss_dssp             HHHHH-HHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEE-TTEEEEE
T ss_pred             HHHHH-HHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCC-ceEEEEE
Confidence            88777 454432111 126677777777777777653    43 3323445 4455544

>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}

Probab=99.80  E-value=5.6e-18  Score=155.15  Aligned_cols=230  Identities=10%  Similarity=0.047  Sum_probs=156.2

Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchH--HHHHhcCc--eeEEeecCCC
Q 019298           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE--LSAAFRHI--EVRHFDLLPD  156 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~--~~~~~~g~--~~~~~~~~~~  156 (343)
                      ++.+.+++.+.+.++.  + +.+++++|++++++.++..+ .+||+|++.+++|.++.  ..++..|.  +++.++.+..
T Consensus        35 ~~~~~~~~~l~~~~~~--~-~~v~~~~sgt~a~~~~~~~~-~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  110 (379)
T 3ke3_A           35 EVMNDLLSNLKTVYNA--E-AAVIIPGSGTYGMEAVARQL-TIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERT  110 (379)
T ss_dssp             HHHHHHHHHHHHHHTC--S-EEEEEESCHHHHHHHHHHHH-CTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEES
T ss_pred             HHHHHHHHHHHHHhCC--C-CEEEEcCChhHHHHHHHHhC-CCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEecccc
Confidence            3444444444443332  3 68889999999999988655 69999999999997643  34445553  6666665321


Q ss_pred             ------CC-CCCCHHHHHhhhc-CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcc
Q 019298          157 ------KG-WEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM  228 (343)
Q Consensus       157 ------~~-~~~d~~~l~~~~~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~  228 (343)
                            .. ..+|++++++.++ ++++++++++++||||.+++.+++++|+++|++||+++|+|+++. .   .. +..+
T Consensus       111 g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g---~~-~~~~  185 (379)
T 3ke3_A          111 EDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-G---CV-WLDM  185 (379)
T ss_dssp             SCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-T---TC-CCCH
T ss_pred             ccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-C---Cc-cccc
Confidence                  11 2479999999985 478999999999999999999999999999999999999999986 2   11 1122


Q ss_pred             cccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh--c---------------------cccCc
Q 019298          229 GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF--D---------------------ILGDP  285 (343)
Q Consensus       229 ~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~--~---------------------~~~~~  285 (343)
                      ..+   +-.+++.|++|.++.+ .++|+++++        +++++++....  .                     ..+.+
T Consensus       186 ~~~---~~d~~~~s~~K~l~~~-~g~g~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~  253 (379)
T 3ke3_A          186 KEL---GIDVLISAPQKGWSST-PCAGLVMLS--------AAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATM  253 (379)
T ss_dssp             HHH---TCSEEEECTTTTTCSC-CCEEEEEEC--------HHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCC
T ss_pred             ccc---CCCEEEecchhhcCCC-CceEEEEEC--------HHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCC
Confidence            212   2238899999987543 358999885        35666665311  0                     01244


Q ss_pred             chHHHHHHHhccchhhHH--HHHHHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298          286 ATFIQVCIMYGCLSTIMQ--IMIHGNFLENFAGSCVPSYKLIPELINFKS  333 (343)
Q Consensus       286 ~~~~~~a~~~~~l~~~~~--~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~  333 (343)
                      +.....++ .+++....+  +-+.+++++++++.+.+.|+++ |+.+..+
T Consensus       254 ~~~~~~a~-~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~~~  301 (379)
T 3ke3_A          254 PTDSLRQF-RDAILEAKEIGFDILRDAQWELGNRVRKVLTDK-GIESVAA  301 (379)
T ss_dssp             CHHHHHHH-HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSBC
T ss_pred             CHHHHHHH-HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEecCC
Confidence            55555554 444432222  2237788888999999999888 7775443

>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}

Probab=99.80  E-value=2.5e-18  Score=169.69  Aligned_cols=232  Identities=10%  Similarity=0.002  Sum_probs=152.0

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCC
Q 019298           79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG  158 (343)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  158 (343)
                      ..++++.++++++      . .+.+++++|+++++..++.+++++||+|++++|+|.++...+...|++++.++...+ .
T Consensus       207 v~~~ee~la~l~G------~-d~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~-~  278 (755)
T 2vyc_A          207 FGESEKYAARVFG------A-DRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRN-R  278 (755)
T ss_dssp             HHHHHHHHHHHHT------C-SEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBC-T
T ss_pred             HHHHHHHHHHHhC------C-CceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCC-c
Confidence            3567777777773      2 245788899999999999999999999999999999998888889999998877542 2


Q ss_pred             CC----C-----CHHHHHhhhcC--Cc--------eEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCcc-
Q 019298          159 WE----V-----DLDDIESLADQ--NT--------VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHL-  218 (343)
Q Consensus       159 ~~----~-----d~~~l~~~~~~--~~--------~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~-  218 (343)
                      ++    +     |+++|++++++  ++        +++++++| ||+|.+.   ++++|+++|++|++++++|++|+.. 
T Consensus       279 ~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~---dl~~I~~ia~~~~~~livDeA~~~~~  354 (755)
T 2vyc_A          279 YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCY---NAKEAQDLLEKTSDRLHFDEAWYGYA  354 (755)
T ss_dssp             TSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEE---CHHHHHHHHTTTCSEEEEECTTCTTG
T ss_pred             cccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceec---CHHHHHHHHHHcCCEEEEECcCchhc
Confidence            33    4     99999998864  33        38889998 7999995   4788899999999999999999854 


Q ss_pred             ccCCC--CCCcccc--cC-CCCCEEEEccCccccCCCCCc-EEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHH
Q 019298          219 VFGDK--PFVPMGV--FG-STVPILTLGSLSKRWIVPGWR-LGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVC  292 (343)
Q Consensus       219 ~~~~~--~~~~~~~--~~-~~~~~i~~~S~sK~~~~~G~r-~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a  292 (343)
                      .+++.  +..++..  .+ ...++++++|+||+  ++|.+ .|++.+++.........+.+.+....  +.+++....++
T Consensus       355 ~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~--L~g~~~g~~i~~~~~~~~i~~~~~~~~~~~~~--s~sp~~~~iaa  430 (755)
T 2vyc_A          355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKL--LNALSQASYIHVREGRGAINFSRFNQAYMMHA--TTSPLYAICAS  430 (755)
T ss_dssp             GGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTS--SSCCTTCEEEEEECCBTCCCHHHHHHHHHHTS--CSSCCHHHHHH
T ss_pred             ccCcccCCcchhcCCcCCccCCCeEEEECcccc--ccCcCCeeeeeecCcccccCHHHHHHHHHHhC--CCCHHHHHHHH
Confidence            23321  1222211  12 23478899999998  45665 56666665310110011222222111  23444444333


Q ss_pred             HHhccchhhH-H-HHHHHHHHHHHHHHHHHhhcCCCC
Q 019298          293 IMYGCLSTIM-Q-IMIHGNFLENFAGSCVPSYKLIPE  327 (343)
Q Consensus       293 ~~~~~l~~~~-~-~l~~~~~~~~~~~~~~~~L~~~~g  327 (343)
                      + .+++.... + ..+..+++.++.+.+++.|++++|
T Consensus       431 l-~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~  466 (755)
T 2vyc_A          431 N-DVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYK  466 (755)
T ss_dssp             H-HHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             H-HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence            3 33332111 1 122555666666666666666555

>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*

Probab=99.77  E-value=1.1e-17  Score=162.76  Aligned_cols=229  Identities=14%  Similarity=0.047  Sum_probs=150.7

Q ss_pred             CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecC
Q 019298           75 PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL  154 (343)
Q Consensus        75 ~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~  154 (343)
                      +..-..++++.+|++++.       .+.+++++|++.++..++.+++++||+|++++++|.++...+...|+++++++..
T Consensus       193 ~~g~i~eaE~~lA~~fGa-------~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~  265 (715)
T 3n75_A          193 HSGPHKEAEQYIARVFNA-------DRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPT  265 (715)
T ss_dssp             TBTHHHHHHHHHHHHHTC-------SEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEECCC
T ss_pred             CcHHHHHHHHHHHHHhCC-------CCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecc
Confidence            334457899999999941       2355667887899999999999999999999999999999999999999998865


Q ss_pred             CCCCCCC---------CHHHHHhhhcC--Cce---EEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccc-
Q 019298          155 PDKGWEV---------DLDDIESLADQ--NTV---ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-  219 (343)
Q Consensus       155 ~~~~~~~---------d~~~l~~~~~~--~~~---~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~-  219 (343)
                      . +.+++         |++++++++++  +++   ++++++| ||+|.+++.   ++|+++|+++  .+++||||+... 
T Consensus       266 ~-~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl---~~I~ela~~~--~livDEAH~~~~~  338 (715)
T 3n75_A          266 R-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNT---DFIKKTLDVK--SIHFDSAWVPYTN  338 (715)
T ss_dssp             B-CTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECH---HHHHHHCCCS--EEEEECTTCTTGG
T ss_pred             c-cccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCH---HHHHHHhCcC--cEEEccccccccc
Confidence            4 34543         89999998864  233   7899999 999999765   5666667665  379999998653 


Q ss_pred             cCCCC--CCcccccC-CCCC-EEEEccCccccCCCCC-cEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHH
Q 019298          220 FGDKP--FVPMGVFG-STVP-ILTLGSLSKRWIVPGW-RLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIM  294 (343)
Q Consensus       220 ~~~~~--~~~~~~~~-~~~~-~i~~~S~sK~~~~~G~-r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~  294 (343)
                      +++..  ...+. .. ..+. +++++|+||+++  |+ ..|++.+++..    +.+.+.+...... +.+++....+++ 
T Consensus       339 f~~~~~~~~al~-~g~~aD~vii~~~S~hKtL~--gltqgs~i~v~~~i----~~~~~~~~~~~~~-STSpsy~~~Asl-  409 (715)
T 3n75_A          339 FSPIYEGKCGMS-GGRVEGKVIYETQSTHKLLA--AFSQASMIHVKGDV----NEETFNEAYMMHT-TTSPHYGIVAST-  409 (715)
T ss_dssp             GSGGGTTSSTTS-SSCCTTCEEEEEECHHHHSS--CCTTCEEEEEESCC----CHHHHHHHHHHTS-CSSCCHHHHHHH-
T ss_pred             cCCccccccccc-cCcCCCEEEEEEeccccccc--CCCCeeEEEeCchh----hHHHHHHHHHhhc-CCCchHHHHHHH-
Confidence            33221  11111 11 1233 367999999954  43 35888887542    1223333322222 345566555554 


Q ss_pred             hccchhhH--HHHHHHHHHHHHHHHHHHhhcCCC
Q 019298          295 YGCLSTIM--QIMIHGNFLENFAGSCVPSYKLIP  326 (343)
Q Consensus       295 ~~~l~~~~--~~l~~~~~~~~~~~~~~~~L~~~~  326 (343)
                      .+++....  +-.++++++.++.+.+++.|++++
T Consensus       410 daA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~  443 (715)
T 3n75_A          410 ETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLR  443 (715)
T ss_dssp             HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhh
Confidence            33332111  112255666666666666666543

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*

Probab=99.77  E-value=7.6e-18  Score=157.24  Aligned_cols=217  Identities=18%  Similarity=0.172  Sum_probs=138.3

Q ss_pred             HHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHH-hcCCCCeEEEeCCCCcchHHHH----HhcCceeEEeecC
Q 019298           80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMAL-LSRPGANILLPRPGFPIYELSA----AFRHIEVRHFDLL  154 (343)
Q Consensus        80 ~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~-l~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~~~  154 (343)
                      .++++.+++++      +.+++++++++|++.+...+..+ ..++||+|+++.++|+.+...+    +..|.+++.++. 
T Consensus       111 ~~~~~~la~~~------g~~~~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~-  183 (438)
T 1wyu_A          111 FEYQTMIAELA------GLEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL-  183 (438)
T ss_dssp             HHHHHHHHHHH------TSSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC-
T ss_pred             HHHHHHHHHHh------CCCccceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC-
Confidence            35555566655      34667889999999443333333 2468999999999999887554    447999998876 


Q ss_pred             CCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccC---CCccccCCCCCCccccc
Q 019298          155 PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEV---YGHLVFGDKPFVPMGVF  231 (343)
Q Consensus       155 ~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~a---y~~~~~~~~~~~~~~~~  231 (343)
                        +++.+|+++    +++++++|++++| ||||.+.   ++++|+++|+++|+++|+|..   ++.+     .. + ..+
T Consensus       184 --~~~~~d~~~----i~~~t~~v~i~~p-n~tG~~~---~l~~i~~la~~~g~~vivd~d~~a~g~~-----~~-~-~~~  246 (438)
T 1wyu_A          184 --EGGRTPLPE----VGEEVGAVVVQNP-NFLGALE---DLGPFAEAAHGAGALFVAVADPLSLGVL-----KP-P-GAY  246 (438)
T ss_dssp             --BTTBCCCCC----CCTTEEEEEEESS-CTTSBCC---CHHHHHHHHHHTTCEEEEECCTTGGGTB-----CC-H-HHH
T ss_pred             --cCCccCHHH----hCCCeEEEEEECC-CCCeEEe---cHHHHHHHHHHcCCEEEEEechhhccCc-----CC-C-ccC
Confidence              234677766    5667899999999 9999996   578888999999999996632   3221     11 1 222


Q ss_pred             CCCCCEEEEccCccccC----CCCCcEEEEEEeCCCCCCCchHHHHHHh----------------------------hhh
Q 019298          232 GSTVPILTLGSLSKRWI----VPGWRLGWFVTTDPCGMFRKPKVVERMK----------------------------KYF  279 (343)
Q Consensus       232 ~~~~~~i~~~S~sK~~~----~~G~r~G~i~~~~~~~~~~~~~~~~~l~----------------------------~~~  279 (343)
                      .   ..++++| +|.|+    +.|.++||+++++        ++++.+.                            ...
T Consensus       247 g---~D~~~~s-~kk~~~~~~~~Gp~~G~l~~~~--------~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~  314 (438)
T 1wyu_A          247 G---ADIAVGD-GQSLGLPMGFGGPHFGFLATKK--------AFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAK  314 (438)
T ss_dssp             T---CSEEEEE-CTTTTCCCGGGCSCCEEEEECG--------GGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGG
T ss_pred             C---CCEEEEC-CcccCCCccCCCCCeeEEEEcH--------HHHHhCCCceeccccccCCCcceeeeccccccccchhc
Confidence            2   2266666 66654    5677999999864        2332221                            111


Q ss_pred             ccccCc---chHHHHHHHhccch-hhHH-HHHHHHHHHHHHHHHHHhhcCCCCceeeCCC
Q 019298          280 DILGDP---ATFIQVCIMYGCLS-TIMQ-IMIHGNFLENFAGSCVPSYKLIPELINFKST  334 (343)
Q Consensus       280 ~~~~~~---~~~~~~a~~~~~l~-~~~~-~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~  334 (343)
                      . ..+.   +.....++ ...+. ...+ +-+..+++.++++++.+.|++++|+.+..+.
T Consensus       315 ~-t~~~~~~~~~~a~~a-a~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~  372 (438)
T 1wyu_A          315 A-KSNITTNAQLTALMG-AMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPK  372 (438)
T ss_dssp             S-SCCCCSCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCS
T ss_pred             c-cCCccchHHHHHHHH-HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCC
Confidence            1 1111   12222111 11121 1122 3337888899999999999999899875553

>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}

Probab=99.59  E-value=4.8e-14  Score=127.97  Aligned_cols=254  Identities=13%  Similarity=0.013  Sum_probs=162.2

Q ss_pred             CCCCCcHHHHHHHHHHHhcCC---CCCC--CC-----CCCCHHHHHHHHHHHhhhCCCCCCC-CcEEE-ecChHHHHHHH
Q 019298           49 SCFHTTHVATEAVAEALLSEK---FNGY--AP-----TAGLPLTRRAIAEYLSRDLPYKLTP-NDVFV-TSGCTQAIDVA  116 (343)
Q Consensus        49 ~~~~~~~~~~~~~~~~~~~~~---~~~Y--~~-----~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~-~~g~~~al~~~  116 (343)
                      .-.+.++++.+++.+.+.+..   .+.+  ..     ..-..+.|+.+++++      +++. ++|++ |+|+|++++.+
T Consensus        20 t~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll------~~~~~~evif~t~~~T~a~n~a   93 (377)
T 3e77_A           20 FQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELL------AVPDNYKVIFLQGGGCGQFSAV   93 (377)
T ss_dssp             CSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHH------TCCTTEEEEEESSHHHHHHHHH
T ss_pred             ccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHh------CCCCCCeEEEEcCchHHHHHHH
Confidence            346789999999999875311   1110  00     011245777888888      3443 57888 57899999999


Q ss_pred             HHHhcCC--CCeEEEeCCCCcch--HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298          117 MALLSRP--GANILLPRPGFPIY--ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       117 ~~~l~~~--gd~vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~  192 (343)
                      +..+..+  ||+|++..-++.+.  ...++..|..++.++.+  .++..+++.++..+++++++|.+++..|.||...+.
T Consensus        94 ~~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~--~~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pi  171 (377)
T 3e77_A           94 PLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKL--GSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF  171 (377)
T ss_dssp             HHHHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCC--SSSCSCCCGGGCCCCTTCSCEEEESEETTTTEECSS
T ss_pred             HHhccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccC--CCcCCCCChHHhccCCCccEEEEeCccCchheEchh
Confidence            9999865  89988776655432  23455567766666553  344567777777788889999998888999999875


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCc---h
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK---P  269 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~---~  269 (343)
                              +|+++|+++++|.+++..    ..+..+..++     +++.|..|.+|.+|  +|++.++.+......   +
T Consensus       172 --------i~~~~~~~~~vD~~q~~g----~~~id~~~~~-----~~~~s~~K~~gp~G--~g~l~~~~~~l~~~~~~~p  232 (377)
T 3e77_A          172 --------IPDVKGAVLVCDMSSNFL----SKPVDVSKFG-----VIFAGAQKNVGSAG--VTVVIVRDDLLGFALRECP  232 (377)
T ss_dssp             --------CCCCTTCCEEEECTTTTT----SSCCCGGGCS-----EEEEEGGGTTSCTT--CEEEEEETTSCSCCCTTSC
T ss_pred             --------hhccCCCEEEEEcccccC----CCCCchhhcC-----EEEEecccccCCCc--cEEEEEcHHHHhhccCCCC
Confidence                    367899999999999863    2223333322     46788999998778  688877654321100   1


Q ss_pred             HHHH--HHhhhhccccCcchHHHHHHHhccchhhHHH--HH-HHHHHHHHHHHHHHhhcCCCCcee
Q 019298          270 KVVE--RMKKYFDILGDPATFIQVCIMYGCLSTIMQI--MI-HGNFLENFAGSCVPSYKLIPELIN  330 (343)
Q Consensus       270 ~~~~--~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~--l~-~~~~~~~~~~~~~~~L~~~~g~~~  330 (343)
                      .+.+  ...........++.....++ ..+|+-..+.  ++ ..++.++..+++.+.|.++||+.+
T Consensus       233 ~~~~~~~~~~~~~~~~Tp~v~~i~~l-~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~  297 (377)
T 3e77_A          233 SVLEYKVQAGNSSLYNTPPCFSIYVM-GLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYV  297 (377)
T ss_dssp             GGGCHHHHHTTTTCSSCCCHHHHHHH-HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEE
T ss_pred             chhhHHHHhhcCCCCCCchHHHHHHH-HHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCcee
Confidence            1211  11111111233344333333 4444432222  23 778888999999999999888774

>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.56  E-value=8.5e-14  Score=125.84  Aligned_cols=250  Identities=13%  Similarity=0.064  Sum_probs=159.2

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC---CCCC--CC-----CCCCHHHHHHHHHHHhhhCCCCCC-CCc
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK---FNGY--AP-----TAGLPLTRRAIAEYLSRDLPYKLT-PND  102 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Y--~~-----~~g~~~lr~~ia~~~~~~~~~~~~-~~~  102 (343)
                      ..++++|+-|-      .+.++++++++.+.+.+..   .+-|  ..     ..-..+.|+.+++++      +++ +++
T Consensus         3 ~~~~~~f~pgp------t~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll------~~~~~~~   70 (361)
T 3m5u_A            3 AMRKINFSAGP------STLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLY------ELNDDYE   70 (361)
T ss_dssp             -CCCEECCSSS------CCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHH------TCCTTEE
T ss_pred             ccceEeecCCC------CCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHh------CCCCCce
Confidence            34567777765      5678999999998765311   0001  00     012346777788887      343 458


Q ss_pred             EEE-ecChHHHHHHHHHHhcCCCCeEE-EeCCCCc-chHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEE
Q 019298          103 VFV-TSGCTQAIDVAMALLSRPGANIL-LPRPGFP-IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVI  179 (343)
Q Consensus       103 i~~-~~g~~~al~~~~~~l~~~gd~vl-~~~p~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~  179 (343)
                      |++ |+|++++++.++..+. +||++. +..-.|. .+...++..|.++..++.+....+.++++.  + ++++++++.+
T Consensus        71 v~f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~--~-l~~~t~lv~~  146 (361)
T 3m5u_A           71 VLFLQGGASLQFAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV--E-FSDNADYAYI  146 (361)
T ss_dssp             EEEESSHHHHHHHHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC--C-CCTTSSEEEE
T ss_pred             EEEEcCcHHHHHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh--h-cCCCCCEEEE
Confidence            887 9999999999999998 788653 2222232 123345667999999988654322245555  3 7788999999


Q ss_pred             eCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298          180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT  259 (343)
Q Consensus       180 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~  259 (343)
                      ++..|.||...+.        +++ +|+++++|.++....    .+..+..+     .+++.|..|.+|.+|  +|++++
T Consensus       147 ~~~e~~tG~~~~~--------i~~-~~~~~~vD~~q~~g~----~~id~~~~-----d~~~~s~~K~~gp~G--~g~l~~  206 (361)
T 3m5u_A          147 CSNNTIYGTQYQN--------YPK-TKTPLIVDASSDFFS----RKVDFSNI-----ALFYGGVQKNAGISG--LSCIFI  206 (361)
T ss_dssp             ESEETTTTEECSS--------CCC-CSSCEEEECGGGTTS----SCCCCTTE-----EEEEEETTTTSSCTT--CEEEEE
T ss_pred             eCCCCCcceeCCc--------ccc-cCCEEEEEcccccCC----CCCCcccC-----CEEEEechhccCCCc--cEEEEE
Confidence            8888899998762        333 499999999988632    22222222     278889999998777  688877


Q ss_pred             eCCCCCCCchHHHHHHhh-----------h--hcc-ccCcchHHHHHHHhccchhhHHH--HH-HHHHHHHHHHHHHHhh
Q 019298          260 TDPCGMFRKPKVVERMKK-----------Y--FDI-LGDPATFIQVCIMYGCLSTIMQI--MI-HGNFLENFAGSCVPSY  322 (343)
Q Consensus       260 ~~~~~~~~~~~~~~~l~~-----------~--~~~-~~~~~~~~~~a~~~~~l~~~~~~--l~-~~~~~~~~~~~~~~~L  322 (343)
                      +.        ++.+++..           .  ... ...++.....++ ..+++-..+.  ++ ..++.++..+++.+.|
T Consensus       207 ~~--------~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l-~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L  277 (361)
T 3m5u_A          207 RK--------DMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMF-NLEMDWLLNQGGLDKVHEKNSQKATMLYECI  277 (361)
T ss_dssp             EH--------HHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHH-HHHHHHHHTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             cH--------HHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHH-HHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence            53        45544432           0  111 223343333333 4444432222  33 7788889999999999


Q ss_pred             cCCCCc
Q 019298          323 KLIPEL  328 (343)
Q Consensus       323 ~~~~g~  328 (343)
                      .+++|+
T Consensus       278 ~~~~g~  283 (361)
T 3m5u_A          278 DLSNGF  283 (361)
T ss_dssp             HTSTTS
T ss_pred             HHCCCe
Confidence            998766

>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*

Probab=99.53  E-value=6.8e-14  Score=127.64  Aligned_cols=250  Identities=10%  Similarity=-0.020  Sum_probs=152.4

Q ss_pred             CCCcHHHHHHHHHHHhcCC--------CCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCC-CcEEE-ecChHHHHHHHHH
Q 019298           51 FHTTHVATEAVAEALLSEK--------FNGYAP--TAGLPLTRRAIAEYLSRDLPYKLTP-NDVFV-TSGCTQAIDVAMA  118 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~--------~~~Y~~--~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~-~~g~~~al~~~~~  118 (343)
                      .+.++++++++.+.+.+..        .+...+  ..-..+.|+.+++++      +++. ++|++ |+|+|++++.++.
T Consensus        36 t~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll------~~~~~~evif~t~~~T~a~n~ai~  109 (386)
T 3qm2_A           36 AMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLL------NIPSNYKVLFCHGGGRGQFAGVPL  109 (386)
T ss_dssp             CCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHH------TCCTTEEEEEEESCTTHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHh------CCCCCceEEEEcCCchHHHHHHHH
Confidence            4678999999877653210        011111  245678999999999      3433 47888 6899999999999


Q ss_pred             HhcCCCCeEEEeCCCCcc--hHHHHHhcCceeEEeecC-CCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccc-cCHHH
Q 019298          119 LLSRPGANILLPRPGFPI--YELSAAFRHIEVRHFDLL-PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNV-YSYQH  194 (343)
Q Consensus       119 ~l~~~gd~vl~~~p~~~~--~~~~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~-~~~~~  194 (343)
                      .+.++||+|++..-++.+  +...++..| .+..++.+ ++++..+++++++.++++++++|.+++..|.||.. .+.+ 
T Consensus       110 ~l~~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~~h~et~tG~~i~pi~-  187 (386)
T 3qm2_A          110 NLLGDKTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSDNAAYLHYCPNETIDGIAIDETP-  187 (386)
T ss_dssp             HHCTTCCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCTTCSCEEECSEETTTTEECCCCC-
T ss_pred             hccCCCCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCCCCcEEEEECCcCCcCEecCchh-
Confidence            999999998755444433  233455667 88877765 12333367788888888889999888888899996 4433 


Q ss_pred             HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCC---chHH
Q 019298          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR---KPKV  271 (343)
Q Consensus       195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~---~~~~  271 (343)
                        +|.     +|+++++|.+++..    ..+..+..++     +.+.|..|.+|.+|  +|++.++++.....   .+.+
T Consensus       188 --~i~-----~g~~~~vDa~qs~g----~~pidv~~~~-----~~~~s~hK~lGP~G--~g~l~v~~~~~~~~~~~~p~~  249 (386)
T 3qm2_A          188 --DFG-----PEVVVTADFSSTIL----SAPLDVSRYG-----VIYAGAQKNIGPAG--LTLVIVREDLLGKAHESCPSI  249 (386)
T ss_dssp             --CCC-----TTCCEEEECTTTTT----SSCCCGGGCS-----EEEEETTTTTCCTT--EEEEEEEGGGCSCCCTTSCGG
T ss_pred             --hhc-----CCCEEEEEcccccC----CCCCCccccC-----EEEEecccccCCCc--cEEEEECHHHHhhhcccCCcH
Confidence              332     79999999998862    2333333332     46688999998777  78888875431100   0111


Q ss_pred             HH--HHhhhhccccCcchHHHHHHHhccchhhHHH--HH-HHHHHHHHHHHHHHhhcCCCCc
Q 019298          272 VE--RMKKYFDILGDPATFIQVCIMYGCLSTIMQI--MI-HGNFLENFAGSCVPSYKLIPEL  328 (343)
Q Consensus       272 ~~--~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~--l~-~~~~~~~~~~~~~~~L~~~~g~  328 (343)
                      ..  ...........++.....++ ..+++-..+.  ++ ..++.++.++++.+.|.++ |+
T Consensus       250 ~~~~~~~~~~~~~gTp~v~~i~~l-~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~-~~  309 (386)
T 3qm2_A          250 LDYTVLNDNDSMFNTPPTFAWYLS-GLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNS-DF  309 (386)
T ss_dssp             GCHHHHHHC-------CCSHHHHH-HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTC-SS
T ss_pred             HHHHHHhhcCCCCCCCcHHHHHHH-HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence            11  01111111223333333333 3444322232  33 7778888899999999887 54

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}

Probab=99.51  E-value=1.3e-13  Score=125.37  Aligned_cols=223  Identities=13%  Similarity=0.045  Sum_probs=139.0

Q ss_pred             HHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCC----CCeEEEeCCCCcchHHHHHhcCceeEEeecCC-CCC
Q 019298           84 RAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP----GANILLPRPGFPIYELSAAFRHIEVRHFDLLP-DKG  158 (343)
Q Consensus        84 ~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~----gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~  158 (343)
                      ..+.+|++. .|.+. ....++++|+|.++..++.+.+++    +|+|++++.+|.+....+...|++.++++... ++.
T Consensus       120 ~l~ld~L~~-~G~~~-~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~  197 (501)
T 3hl2_A          120 SLVLDIIKL-AGVHT-VANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDE  197 (501)
T ss_dssp             HHHHHHHHH-TTCTT-CCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTE
T ss_pred             HHHHHHHHH-cCCCC-CCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecccc
Confidence            334455544 45442 246889999997777766666553    49999999999999999999999999887632 235


Q ss_pred             CCCCHHHHHhhhcC---CceEEEEeCC-CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccc-cCCCCCCcccccCC
Q 019298          159 WEVDLDDIESLADQ---NTVALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLV-FGDKPFVPMGVFGS  233 (343)
Q Consensus       159 ~~~d~~~l~~~~~~---~~~~i~~~~p-~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~-~~~~~~~~~~~~~~  233 (343)
                      .++|++++++++++   +..++++.++ .|-.+.+   +++++|+++|++||+++++|+||+... +...-+.....++.
T Consensus       198 ~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~---ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~Gr  274 (501)
T 3hl2_A          198 LRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVP---DRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGR  274 (501)
T ss_dssp             EEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSC
T ss_pred             cCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCccc---ccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCC
Confidence            77999999999865   2334444444 4544455   679999999999999999999999753 11111111112221


Q ss_pred             CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHH-HHHHHhccchh-hHHHHHHHHHH
Q 019298          234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFI-QVCIMYGCLST-IMQIMIHGNFL  311 (343)
Q Consensus       234 ~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~a~~~~~l~~-~~~~l~~~~~~  311 (343)
                        -.+++.|.+|++..+ .. |.++...      ++++++++........+.++.. ..+.   ++.- ...|.+..++.
T Consensus       275 --AD~vVqS~HK~llvp-IG-G~ii~~~------d~e~l~~~~~~yPGr~S~Spsldl~~t---LL~lGr~Gy~~ll~e~  341 (501)
T 3hl2_A          275 --IDAFVQSLDKNFMVP-VG-GAIIAGF------NDSFIQEISKMYPGRASASPSLDVLIT---LLSLGSNGYKKLLKER  341 (501)
T ss_dssp             --CCEEEEEHHHHHCCC-SS-CEEEEES------CHHHHHHHHHTSCSCBCSHHHHHHHHH---HHHHHHHHHHHHHHHH
T ss_pred             --CcEEEecccccceee-cC-ceEEEeC------CHHHHHHHHHhCCCCCCCcHHHHHHHH---HHHHHHHHHHHHHHHH
Confidence              238999999997665 11 4444322      3467777654442222222222 2222   2221 13333455566


Q ss_pred             HHHHHHHHHhhcC
Q 019298          312 ENFAGSCVPSYKL  324 (343)
Q Consensus       312 ~~~~~~~~~~L~~  324 (343)
                      .++.+++.+.|++
T Consensus       342 ~ela~~L~~~L~~  354 (501)
T 3hl2_A          342 KEMFSYLSNQIKK  354 (501)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            6666666666654

>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*

Probab=99.51  E-value=1e-12  Score=121.94  Aligned_cols=257  Identities=16%  Similarity=0.118  Sum_probs=157.1

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++++||+..|.-.  ..++ .+|++.++++++++..... ..+.....++.+.+++.+.       ..+.+.+++++++
T Consensus        85 dG~~ylD~~~g~~~--~~lGH~hp~v~~Av~~q~~~~~~~-~~~~~~~~~lae~l~~~~p-------~~~~v~f~~SGsE  154 (454)
T 4ao9_A           85 DGHRYADFIAEYTA--GVYGHSAPEIRDAVIEAMQGGINL-TGHNLLEGRLARLICERFP-------QIEQLRFTNSGTE  154 (454)
T ss_dssp             TCCEEEESSGGGGT--TTTCSCCHHHHHHHHHHHHTCSCC-CSEESSHHHHHHHHHHHST-------TCSEEEEESSHHH
T ss_pred             CCCEEEEccccHHh--hcccCCCHHHHHHHHHHHhcCCCc-cCCcHHHHHHHHHHHHhCC-------CCCEEEEeCchHH
Confidence            38899999877633  1234 7899999999998764321 2223344566677766652       4689999999999


Q ss_pred             HHHHHHHHhcC--CCCeEEEeCCCCcchHHHHHhc------CceeEEeecCCCCCCCCCHHHHHhhhcCC--ceEEEEeC
Q 019298          112 AIDVAMALLSR--PGANILLPRPGFPIYELSAAFR------HIEVRHFDLLPDKGWEVDLDDIESLADQN--TVALVIIN  181 (343)
Q Consensus       112 al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~------g~~~~~~~~~~~~~~~~d~~~l~~~~~~~--~~~i~~~~  181 (343)
                      |...+++....  ..++|+..+-+|.+........      ..+...++.       -|++.+++.+...  ..+.++..
T Consensus       155 A~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~-------nd~~~l~~~l~~~~~~iAavIvE  227 (454)
T 4ao9_A          155 ANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY-------NDAQTARAQIERHGPEIAVVLVE  227 (454)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT-------TCHHHHHHHHHHTGGGEEEEEEC
T ss_pred             HHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC-------chHHHHHHHHhhcCCceEEEEec
Confidence            99999987642  3368888888887643211110      111222221       2688888877532  23445556


Q ss_pred             C-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298          182 P-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT  259 (343)
Q Consensus       182 p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~  259 (343)
                      | ....|.+ .+++.+++|.++|++||+++|+||++.+ . .+.. .....++-.+. ++  +++|.++ .|+.+|.+++
T Consensus       228 Pv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG-R-~G~~-~a~e~~gv~PD-i~--t~gK~lg-gG~Piga~~~  300 (454)
T 4ao9_A          228 PMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS-R-LAPH-GLANKLGIRSD-LT--TLGKYIG-GGMSFGAFGG  300 (454)
T ss_dssp             SEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG-G-GSTT-CHHHHHTCCCS-EE--EEEGGGG-TTSSCEEEEE
T ss_pred             cccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC-C-Cccc-cchhccCCCCc-EE--EeccccC-CCCcceeeee
Confidence            6 5566766 5678899999999999999999999974 1 1211 11111222222 33  5789964 6789999988


Q ss_pred             eCCCCCCCchHHHHHHhhh-----hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhc
Q 019298          260 TDPCGMFRKPKVVERMKKY-----FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYK  323 (343)
Q Consensus       260 ~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~  323 (343)
                      +        .++.+.+...     ...+++.++++.+++ .+.|+...+ -+..++++++.+++.+.|+
T Consensus       301 ~--------~ei~~~~~~~~~~~~h~~T~~gnPla~AAa-la~L~~l~~-~~~~~~~~~~g~~l~~~L~  359 (454)
T 4ao9_A          301 R--------ADVMALFDPRTGPLAHSGTFNNNVMTMAAG-YAGLTKLFT-PEAAGALAERGEALRARLN  359 (454)
T ss_dssp             C--------HHHHGGGCTTTCSCCCCCTTTTCHHHHHHH-HHHHHHTSC-HHHHHHHHHHHHHHHHHHH
T ss_pred             H--------HHHHHHHhhccCCccccCCCCCCHHHHHHH-HHHHHHHhc-cChhHHHHHHHHHHHHHHH
Confidence            5        3566655432     222456678877776 444432100 0144445555555555444

>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*

Probab=99.49  E-value=2e-13  Score=125.52  Aligned_cols=186  Identities=13%  Similarity=0.071  Sum_probs=124.0

Q ss_pred             HHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcC----CCCeEEEeCCCCcchHHHHHhcCceeEEeecCC
Q 019298           80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR----PGANILLPRPGFPIYELSAAFRHIEVRHFDLLP  155 (343)
Q Consensus        80 ~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~----~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~  155 (343)
                      ..+.+.+..++.+..|.+ .....++++|+|.++..++.+.++    +++.|++++-+|.+....+...|++.+.++..+
T Consensus        97 ~~~e~~~~~~~~~~lGlp-~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~~~  175 (450)
T 3bc8_A           97 NKITNSLVLNVIKLAGVH-SVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVL  175 (450)
T ss_dssp             HHHHHHHHHHHHHHHTCT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEE
T ss_pred             HHHHHHHHHHHHHhCCCC-CCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEeee
Confidence            346666777766655643 223458888887444444434433    379999999999999999999999988886532


Q ss_pred             -CCCCCCCHHHHHhhhcC---CceEEEEeCC-CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCC-ccc
Q 019298          156 -DKGWEVDLDDIESLADQ---NTVALVIINP-GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFV-PMG  229 (343)
Q Consensus       156 -~~~~~~d~~~l~~~~~~---~~~~i~~~~p-~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~-~~~  229 (343)
                       ++...+|++++++++.+   +.+.+++.+| .+.+|.+   +++++|+++|++||+++++|+||+.....-...+ ...
T Consensus       176 ~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~---ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~  252 (450)
T 3bc8_A          176 EGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVP---DRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGA  252 (450)
T ss_dssp             ETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHH
T ss_pred             cCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCcee---cCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHh
Confidence             23578999999999965   2456666677 4556777   7899999999999999999999997432111000 111


Q ss_pred             ccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh
Q 019298          230 VFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF  279 (343)
Q Consensus       230 ~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~  279 (343)
                      ...  .-.+++.|++|++..+ ...+++...       |++..+++....
T Consensus       253 ~~~--~AD~~v~S~HK~l~a~-~~~~~l~~r-------d~~~~~~~~~~~  292 (450)
T 3bc8_A          253 RVG--RIDAFVQSLDKNFMVP-VGGAIIAGF-------NEPFIQDISKMY  292 (450)
T ss_dssp             HHS--CCCEEEEEHHHHHSCC-SSCEEEEES-------CHHHHHHHHHHS
T ss_pred             ccc--CCCEEEECCccCCCch-hccEEEEec-------CHHHHHHHHHHh
Confidence            111  1237889999995443 335666553       345666665443

>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}

Probab=99.42  E-value=3.7e-11  Score=109.00  Aligned_cols=287  Identities=14%  Similarity=0.049  Sum_probs=162.8

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC---C---CHHHHHHHHHHHhhhCCCCCCCC--cEEEe
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTA---G---LPLTRRAIAEYLSRDLPYKLTPN--DVFVT  106 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~---g---~~~lr~~ia~~~~~~~~~~~~~~--~i~~~  106 (343)
                      ..-|+|--.+      .-.++.+++++-..+.+.-..+||-..   |   ..+++....+..++.||.....-  ||-.-
T Consensus        54 ~~~ieLIASE------N~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~  127 (490)
T 3ou5_A           54 CRGLELIASE------NFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPY  127 (490)
T ss_dssp             HHSEECCTTC------CCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCS
T ss_pred             HcCceEecCC------CcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCcC
Confidence            3446665554      246788888877776654444444311   1   23444444445555555332211  44444


Q ss_pred             cChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH--------HHhcCc--eeEEeecCCCCCCCCCHHHHHhhhcC-Cce
Q 019298          107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELS--------AAFRHI--EVRHFDLLPDKGWEVDLDDIESLADQ-NTV  175 (343)
Q Consensus       107 ~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~--------~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~  175 (343)
                       +++.|...++.+|++|||+|+-.+..+++...-        ....|.  +...+.++++ +..+|.|++++.... +|+
T Consensus       128 -SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~-t~~IDyd~~~~~A~~~kPk  205 (490)
T 3ou5_A          128 -SGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPK-TGLIDYNQLALTARLFRPR  205 (490)
T ss_dssp             -SHHHHHHHHHHHHCC-CCCEECBC----------------------------CBCEETT-TTEECHHHHHHHHHHHCCS
T ss_pred             -CHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCC-CCcccHHHHHHHHhhcCCC
Confidence             457788888999999999999888877654221        111222  3445555543 457999999987654 788


Q ss_pred             EEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCc-cccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE
Q 019298          176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL  254 (343)
Q Consensus       176 ~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~  254 (343)
                      +|++....+|-=  +   +++++.++|.+-|.++++|.+|.. ++-++.-+.++.. .+    ++..|++|+  +.|.|-
T Consensus       206 lIi~G~SaY~r~--i---d~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~-AD----vVTtTTHKT--LrGPrG  273 (490)
T 3ou5_A          206 LIIAGTSAYARL--I---DYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKH-AD----IVTTTTHKT--LRGARS  273 (490)
T ss_dssp             EEEECCSSCCSC--C---CHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT-CS----EEEEESSST--TCSCSC
T ss_pred             eEEECCccCccc--c---CHHHHHHHHhhcccEEEechhhhhhhhcccccCCcccc-ce----EEecccccc--ccCCCc
Confidence            877655455533  2   356677777799999999999984 4445543444432 22    889999999  688899


Q ss_pred             EEEEEeCCCCCC----C---chHHHHHHhhhh-cc-ccCcchHHHHHHHhccchh--hHHHHHHHHHHHHHHHHHHHhhc
Q 019298          255 GWFVTTDPCGMF----R---KPKVVERMKKYF-DI-LGDPATFIQVCIMYGCLST--IMQIMIHGNFLENFAGSCVPSYK  323 (343)
Q Consensus       255 G~i~~~~~~~~~----~---~~~~~~~l~~~~-~~-~~~~~~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~~~~~~L~  323 (343)
                      |.|++.++..-.    .   ..++.+++.... .. .+++-...-++. ..++.+  ..++.+..+++.++.+.|.+.|.
T Consensus       274 G~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAk-AVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~  352 (490)
T 3ou5_A          274 GLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAV-AVALKQACTPMFREYSLQVLKNARAMADALL  352 (490)
T ss_dssp             EEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHH-HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHH-HHHHHHHHhHhHHHHHHHHHHHHHHHHHHHH
Confidence            999986531000    0   003455555442 21 223333322333 222221  24555688889999999999999


Q ss_pred             CCCCceee-CCCCceEeeecC
Q 019298          324 LIPELINF-KSTGSSLKYLDL  343 (343)
Q Consensus       324 ~~~g~~~~-~~~~g~~~~~~l  343 (343)
                      +. |+.++ .......+++|+
T Consensus       353 ~~-G~~vvsGgTdnHlvLvDl  372 (490)
T 3ou5_A          353 ER-GYSLVSGGTDNHLVLVDL  372 (490)
T ss_dssp             HT-TCEEGGGSCSSSEEEEEC
T ss_pred             hC-CCeeecCCCCceEEEEec
Confidence            87 88843 445556666554

>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*

Probab=99.42  E-value=1.8e-11  Score=113.89  Aligned_cols=243  Identities=13%  Similarity=0.069  Sum_probs=146.3

Q ss_pred             ccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCC-CC-CCCCCCCHHHHHHHHHHHhhhCCCCC-CCCcEEEecCh
Q 019298           34 EKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKF-NG-YAPTAGLPLTRRAIAEYLSRDLPYKL-TPNDVFVTSGC  109 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~-Y~~~~g~~~lr~~ia~~~~~~~~~~~-~~~~i~~~~g~  109 (343)
                      ++.++|+..|.-.  ..++ .+|++.+++++++..... .. +.+.....+|-+.+++..      +. ..+.+++++++
T Consensus        63 G~~ylD~~~g~~~--~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~------p~~~~~~v~f~~sG  134 (456)
T 4atq_A           63 GNSFIDLGSGIAV--TSVGASDPAVVAAVQEAAAHFTHTCFMVTPYEGYVAVTEQLNRLT------PGDHAKRTVLFNSG  134 (456)
T ss_dssp             SCEEEESSHHHHT--CTTCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHS------SCSSCEEEEEESSH
T ss_pred             CCEEEEccccHHH--HhcCCCCHHHHHHHHHHHhhccCcccCccCcHHHHHHHHHHHHhC------CCCCCcEEEEeCCh
Confidence            8888999877522  1233 789999999998875321 11 112212233444444444      21 24578999999


Q ss_pred             HHHHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhc-Cc-------------eeEEeecCC----CCCCCCCHHHHHhh
Q 019298          110 TQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLP----DKGWEVDLDDIESL  169 (343)
Q Consensus       110 ~~al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~----~~~~~~d~~~l~~~  169 (343)
                      ++|++.+++...  ....+|+...-+|++....+... +.             .+..++...    .....-+.+.+++.
T Consensus       135 sEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  214 (456)
T 4atq_A          135 AEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRA  214 (456)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHH
Confidence            999999998753  23468888888887765433222 11             223333211    00111123333322


Q ss_pred             -------hcCCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEE
Q 019298          170 -------ADQNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL  240 (343)
Q Consensus       170 -------~~~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~  240 (343)
                             +..+..+.++.-| ....|.+ .+++.+++|.++|++||+++|.||++.++...+.- .....++-.++ |+ 
T Consensus       215 ~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~-~a~e~~gv~PD-iv-  291 (456)
T 4atq_A          215 ITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEW-FAVDHEGVVPD-II-  291 (456)
T ss_dssp             HHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGTTCCCS-EE-
T ss_pred             HHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCcccc-ccccccCCCCc-hh-
Confidence                   2233445566666 5556765 56789999999999999999999999997655542 22222332223 43 


Q ss_pred             ccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccc
Q 019298          241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCL  298 (343)
Q Consensus       241 ~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l  298 (343)
                       +++|.+ ..|+.+|.+++..        ++.+.+.... ..+++.++++.+++ .+.|
T Consensus       292 -t~gK~l-ggg~P~~av~~~~--------~i~~~~~~~~~~~Tf~gnpla~aaa-la~L  339 (456)
T 4atq_A          292 -TMAKGI-AGGLPLSAITGRA--------DLLDAVHPGGLGGTYGGNPVACAAA-LAAI  339 (456)
T ss_dssp             -EECGGG-GTTSSCEEEEEEH--------HHHTTSCTTSSCCSSSSCHHHHHHH-HHHH
T ss_pred             -hhhhcc-cCcCCceeeEecH--------HHHhcccccCCCCCCCCChHHHHhh-HHHH
Confidence             457995 4789999999853        5555554332 33667788877777 4443

>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A

Probab=99.41  E-value=2e-11  Score=114.01  Aligned_cols=270  Identities=14%  Similarity=0.093  Sum_probs=159.4

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCC-CHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAG-LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g-~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  110 (343)
                      ++++++|+..|.-..  .++ .+|++.++++++++...  .|....+ ..+....+|+.+.+..  +.+.++|+++++++
T Consensus        65 dG~~ylD~~~g~~~~--~lGh~~p~v~~Ai~~q~~~l~--~~~~~~~~~~~~~~~lAe~L~~~~--p~~~~~v~f~~sGs  138 (473)
T 4e3q_A           65 NGRRYLDANSGLWNM--VAGFDHKGLIDAAKAQYERFP--GYHAFFGRMSDQTVMLSEKLVEVS--PFDSGRVFYTNSGS  138 (473)
T ss_dssp             TCCEEEETTTTTTTC--TTCSCCHHHHHHHHHHHHHCC--CCCCCTTEEEHHHHHHHHHHHHHS--SCSSCEEEEESSHH
T ss_pred             CCCEEEEcccCHHHh--hccCCCHHHHHHHHHHHHhcc--cccccccccCHHHHHHHHHHHhhC--CCCccEEEEeCchH
Confidence            388899998886332  233 68999999999987532  1221111 1233334444443322  33457999999999


Q ss_pred             HHHHHHHHHhc-------CC-CCeEEEeCCCCcchHHHHHh-cCc-----------eeEEeecCCC---CCCCCC-----
Q 019298          111 QAIDVAMALLS-------RP-GANILLPRPGFPIYELSAAF-RHI-----------EVRHFDLLPD---KGWEVD-----  162 (343)
Q Consensus       111 ~al~~~~~~l~-------~~-gd~vl~~~p~~~~~~~~~~~-~g~-----------~~~~~~~~~~---~~~~~d-----  162 (343)
                      +|++.+++...       ++ ..+|+...-+|.+....+.. .|.           ....++....   ......     
T Consensus       139 EA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  218 (473)
T 4e3q_A          139 EANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFV  218 (473)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHHH
Confidence            99999998753       12 25788888888765443322 221           1122211100   000011     


Q ss_pred             ---HHHHHhhhc---CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC
Q 019298          163 ---LDDIESLAD---QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST  234 (343)
Q Consensus       163 ---~~~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~  234 (343)
                         .+++++.+.   .+..+.++.-| ..-.|.+ .+++.+++|.++|++||+++|.||+..+|...+.-. ....++-.
T Consensus       219 ~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~f-a~e~~gv~  297 (473)
T 4e3q_A          219 ARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTW-GCVTYDFT  297 (473)
T ss_dssp             HHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSC-HHHHTTCC
T ss_pred             HHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchh-HHHhcCCC
Confidence               233444432   23445566666 5566766 566899999999999999999999999986555422 22222222


Q ss_pred             CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh--------hccccCcchHHHHHHHhccchhhHHHHH
Q 019298          235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--------FDILGDPATFIQVCIMYGCLSTIMQIMI  306 (343)
Q Consensus       235 ~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~~l~~~~~~l~  306 (343)
                      +.++   +++|.++..++.+|.+++++        ++.+.+...        ...+++.++++.+++ .+.|+   .+.+
T Consensus       298 PDi~---t~~K~l~gG~~Pl~av~~~~--------~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaa-la~L~---~i~~  362 (473)
T 4e3q_A          298 PDAI---ISSKNLTAGFFPMGAVILGP--------ELSKRLETAIEAIEEFPHGFTASGHPVGCAIA-LKAID---VVMN  362 (473)
T ss_dssp             CSEE---EECGGGGTTSSCCEEEEECH--------HHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHH-HHHHH---HHHH
T ss_pred             CChH---HhcccccCCCCCcccccccH--------HHHHHhccccccccccccCCCCCCCcchhhhh-hhhhh---hhcc
Confidence            2333   46899765559999999853        676666432        223556677777776 33332   2222


Q ss_pred             --HHHHHHHHHHHHHHhhcC
Q 019298          307 --HGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       307 --~~~~~~~~~~~~~~~L~~  324 (343)
                        ..++.++.-+++.+.|++
T Consensus       363 ~~l~~~~~~~g~~l~~~L~~  382 (473)
T 4e3q_A          363 EGLAENVRRLAPRFEERLKH  382 (473)
T ss_dssp             SSHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHH
Confidence              556666666666666554

>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*

Probab=99.29  E-value=2.3e-11  Score=121.13  Aligned_cols=243  Identities=13%  Similarity=0.045  Sum_probs=144.5

Q ss_pred             ceeEeccCCCCCCCCCC-C-cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEecChHHH
Q 019298           36 KVISLAMGDPTVHSCFH-T-THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVTSGCTQA  112 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~~~~g~~~a  112 (343)
                      +++|+..|.-.  .+++ . +|++.+++++++..-....+.  ....+....+++.+.+..  +-. .+++++++++++|
T Consensus       381 ~ylD~~sg~~~--~~lGh~~~p~i~~Ai~~Q~~~l~h~~~~--~~~~~~~~~Lae~L~~~~--p~~~l~~vff~~SGSeA  454 (831)
T 4a0g_A          381 QQFDACASWWT--QGPDPTFQAELAREMGYTAARFGHVMFP--ENVYEPALKCAELLLDGV--GKGWASRVYFSDNGSTA  454 (831)
T ss_dssp             EEEETTHHHHT--CCCCHHHHHHHHHHHHHHHHHHSSCCCT--TEECHHHHHHHHHHHHTT--TTTTCCEEEEESSHHHH
T ss_pred             heeeecccHhh--cCCCCCCCHHHHHHHHHHHhhccccccc--ccCCHHHHHHHHHHHHhC--CCCCCCEEEECCChhHH
Confidence            67888877422  2244 4 899999999988752111111  111233334455444322  112 4689999999999


Q ss_pred             HHHHHHHhc-----CC------------CCeEEEeCCCCcchHHH-HHhcCce---------------e-----------
Q 019298          113 IDVAMALLS-----RP------------GANILLPRPGFPIYELS-AAFRHIE---------------V-----------  148 (343)
Q Consensus       113 l~~~~~~l~-----~~------------gd~vl~~~p~~~~~~~~-~~~~g~~---------------~-----------  148 (343)
                      ++.+++...     ..            ..+|+..+-+|++-... ....|..               .           
T Consensus       455 ~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  534 (831)
T 4a0g_A          455 IEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSN  534 (831)
T ss_dssp             HHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEET
T ss_pred             HHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccC
Confidence            999988762     12            23688888888654333 3332311               0           


Q ss_pred             --EEeecCCC------CCCC-CC------------------HHHHHhhhc-------CCceEEEEeCC--CCCcccc-cC
Q 019298          149 --RHFDLLPD------KGWE-VD------------------LDDIESLAD-------QNTVALVIINP--GNPCGNV-YS  191 (343)
Q Consensus       149 --~~~~~~~~------~~~~-~d------------------~~~l~~~~~-------~~~~~i~~~~p--~nptG~~-~~  191 (343)
                        ..++....      +... -+                  .+.|++.+.       ....+.++.-|  ++..|.. .+
T Consensus       535 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~  614 (831)
T 4a0g_A          535 GSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVD  614 (831)
T ss_dssp             TEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEEC
T ss_pred             CceEecCCccccccccccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCC
Confidence              00111100      0000 01                  245666654       23344455556  6888877 48


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCC-CcEEEEEEeCCCCCCCchH
Q 019298          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPG-WRLGWFVTTDPCGMFRKPK  270 (343)
Q Consensus       192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G-~r~G~i~~~~~~~~~~~~~  270 (343)
                      .+.+++|.++|++||+++|+||++.++...+... ....++-.++++   +++|.++. | +++|++++++        +
T Consensus       615 ~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~f-a~e~~gv~PDii---tlsK~L~g-G~~Plgav~~~~--------~  681 (831)
T 4a0g_A          615 PLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVET-TTELLGCKPDIA---CFAKLLTG-GMVPLAVTLATD--------A  681 (831)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSS-THHHHSSCCSEE---EECGGGGT-TSSCCEEEEECH--------H
T ss_pred             HHHHHHHHHHHHHcCCeEEEEcCccccccCCCch-hhHhcCCCCcEE---EEeccccc-CccCcEEEEECH--------H
Confidence            8899999999999999999999999987666533 222222222333   68999765 6 8999999963        6


Q ss_pred             HHHHHhhh-------hccccCcchHHHHHHHhccc
Q 019298          271 VVERMKKY-------FDILGDPATFIQVCIMYGCL  298 (343)
Q Consensus       271 ~~~~l~~~-------~~~~~~~~~~~~~a~~~~~l  298 (343)
                      +.+.+...       ...+++.++++.+++ .+.|
T Consensus       682 i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaa-la~L  715 (831)
T 4a0g_A          682 VFDSFSGDSKLKALLHGHSYSAHAMGCATA-AKAI  715 (831)
T ss_dssp             HHHTTCSSCGGGSCCCCCTTTTCHHHHHHH-HHHH
T ss_pred             HHHHHhcccccccceeecCCcccHHHHHHH-HHHH
Confidence            77766532       223556788887777 4443

>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*

Probab=84.79  E-value=6  Score=36.94  Aligned_cols=114  Identities=18%  Similarity=0.241  Sum_probs=70.0

Q ss_pred             CCCCCCCCcEEEecChHHHHHHHHHHhc---CC---------C-C-----eEEEeCCCCcc-------------------
Q 019298           94 LPYKLTPNDVFVTSGCTQAIDVAMALLS---RP---------G-A-----NILLPRPGFPI-------------------  136 (343)
Q Consensus        94 ~~~~~~~~~i~~~~g~~~al~~~~~~l~---~~---------g-d-----~vl~~~p~~~~-------------------  136 (343)
                      |...++++.|.++.++..++...+++|.   ..         | .     ..+...|.|..                   
T Consensus       124 Y~L~v~~~~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~g~~~~lp~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~  203 (525)
T 3gh5_A          124 YDLITTSNQVTLTANKPEGVFRGNQTLLQLLPAGIEKNTVVSGVQWVIPHSNISDKPEYEYRGLMLDVARHFFTVDEVKR  203 (525)
T ss_dssp             EEEEECSSEEEEEESSHHHHHHHHHHHHHHSCTTTTCSSCCCSCCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHH
T ss_pred             eEEEEeCCEEEEEECCHHHHHHHHHHHHHHHhhhccccccccCcceeccceEEeecCCcceeccccCCCCCCCCHHHHHH
Confidence            3345677888888877777666666652   11         1 1     24566777642                   


Q ss_pred             hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEE
Q 019298          137 YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA  211 (343)
Q Consensus       137 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~  211 (343)
                      +.+....+++++..+.+.++.+|.+.++.+-+.-.....    .......|-.++++|+++|++.|+++++-||-
T Consensus       204 ~id~mA~~KlN~lH~HltDdqgwriei~~~P~Lt~~Ga~----~~~~~~~~g~YT~~di~eIv~YA~~rgI~VIP  274 (525)
T 3gh5_A          204 QIDLASQYKINKFHMHLSDDQGWRIEIKSWPDLIEIGSK----GQVGGGPGGYYTQEQFKDIVSYAAERYIEVIP  274 (525)
T ss_dssp             HHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTS----CCTTSSCCCCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred             HHHHHHHcCCcEEEEEeccCCccccccccchhhhhccCc----cccCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence            234455567777777776666676665543332111110    00122346789999999999999999988775

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=84.42  E-value=7.1  Score=33.03  Aligned_cols=97  Identities=9%  Similarity=0.093  Sum_probs=58.1

Q ss_pred             CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-----Cce
Q 019298          101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-----NTV  175 (343)
Q Consensus       101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-----~~~  175 (343)
                      .-+++|.|++..=..+.+.|.+.|..|++..-.-......++..|.+...+..+-.     |.+++++.++.     ..-
T Consensus        30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~G~i  104 (273)
T 4fgs_A           30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSA-----NLAELDRLYEKVKAEAGRI  104 (273)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTT-----CHHHHHHHHHHHHHHHSCE
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCC-----CHHHHHHHHHHHHHHcCCC
Confidence            34455555554445556667889988888765555556666667777777765432     45555554432     333


Q ss_pred             EEEEeCC-CCCccc--ccCHHHHHHHHHHH
Q 019298          176 ALVIINP-GNPCGN--VYSYQHLQKLAETA  202 (343)
Q Consensus       176 ~i~~~~p-~nptG~--~~~~~~l~~l~~~~  202 (343)
                      -++++|. .++.+-  .++.++|+++.++-
T Consensus       105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vN  134 (273)
T 4fgs_A          105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRN  134 (273)
T ss_dssp             EEEEECCCCCCCCCTTSCCHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhccHHHHHHHHHHH
Confidence            4555655 333332  36788998888764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	343
d1b5pa_	382	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	6e-50
d1gdea_	388	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	3e-47
d1j32a_	388	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pho	1e-45
d1xi9a_	395	c.67.1.1 (A:) Putative alanine aminotransferase {P	5e-29
d2hoxa1	425	c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativ	2e-27
d3tata_	397	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	9e-26
d1o4sa_	375	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	9e-25
d1w7la_	418	c.67.1.1 (A:) Kynurenine--oxoglutarate transaminas	1e-24
d2q7wa1	396	c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT	2e-24
d1ajsa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig	3e-22
d7aata_	401	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chi	1e-21
d1m7ya_	431	c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate sy	2e-21
d1yaaa_	412	c.67.1.1 (A:) Aspartate aminotransferase, AAT {Bak	2e-21
d2ay1a_	394	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	5e-21
d1wsta1	403	c.67.1.1 (A:13-415) Multiple substrate aminotransf	4e-20
d1bw0a_	412	c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Try	1e-18
d2r5ea1	418	c.67.1.1 (A:12-429) Kynurenine--oxoglutarate trans	3e-18
d1iaya_	428	c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate sy	3e-18
d2gb3a1	389	c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotog	6e-18
d1v2da_	368	c.67.1.1 (A:) Glutamine aminotransferase {Thermus	7e-16
d1u08a_	382	c.67.1.1 (A:) Putative methionine aminotransferase	5e-14
d2aeua1	366	c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Ar	2e-13
d1c7na_	394	c.67.1.3 (A:) Cystalysin {Treponema denticola [Tax	1e-12
d1d2fa_	361	c.67.1.3 (A:) Modulator in mal gene expression, Ma	1e-09
d1p3wa_	391	c.67.1.3 (A:) Cysteine desulfurase IscS {Escherich	3e-08
d1vp4a_	420	c.67.1.1 (A:) Putative aminotransferase TM1131 {Th	5e-08
d2e7ja1	364	c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (	1e-05
d1lc5a_	355	c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxyl	6e-04
d1svva_	340	c.67.1.1 (A:) Low-specificity threonine aldolase {	0.003
d1eg5a_	376	c.67.1.3 (A:) NifS-like protein/selenocysteine lya	0.004
d1c7ga_	456	c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbi	0.004
d2f8ja1	334	c.67.1.1 (A:1-334) Histidinol-phosphate aminotrans	0.004

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

 Score =  169 bits (428), Expect = 6e-50
 Identities = 73/299 (24%), Positives = 124/299 (41%), Gaps = 16/299 (5%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
            +    +++L  G+P     F T     EA   AL ++    YAP AG+P  R A+AE  
Sbjct: 27  RRQGVDLVALTAGEPD----FDTPEHVKEAARRAL-AQGKTKYAPPAGIPELREALAEKF 81

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
            R+    +TP +  VT G +QA+      +  PG  +++  P +  Y     F    V  
Sbjct: 82  RRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVE 141

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
            + LP++G+  D + +       T ALV+ +P NP G VY  + L+ LA  A +    ++
Sbjct: 142 VETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLV 201

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270
           +DE+Y HL++  + F P  V       LT+   +K + + GWR+G+             +
Sbjct: 202 SDEIYEHLLYEGEHFSPGRVAPEHT--LTVNGAAKAFAMTGWRIGYACG--------PKE 251

Query: 271 VVERMKKYFDILG-DPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPEL 328
           V++ M          P T  Q   +    +            E +        + +  L
Sbjct: 252 VIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL 310

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score =  161 bits (409), Expect = 3e-47
 Identities = 68/303 (22%), Positives = 124/303 (40%), Gaps = 8/303 (2%)

Query: 32  KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLS 91
              K VISL +G+P     F T     E   EAL  +    Y P  GL   R AIAE L 
Sbjct: 22  AGMKDVISLGIGEPD----FDTPQHIKEYAKEAL-DKGLTHYGPNIGLLELREAIAEKLK 76

Query: 92  RDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
           +    +  P  ++ V  G  QA  + ++   + G  +L+P P F  Y  +      +   
Sbjct: 77  KQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVE 136

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
                +  + +++D+++      T AL+I +P NP G V + + L+++A+   +   +VI
Sbjct: 137 VPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVI 196

Query: 211 ADEVYGHLVFGDKPFVPM-GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGM-FRK 268
           +DEVY H ++ D     +  + G     +T+   SK + + GWRLG+            K
Sbjct: 197 SDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIERMVK 256

Query: 269 PKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPEL 328
            ++         I    A  ++    +  +  + +       L     + +    + P+ 
Sbjct: 257 FQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKG 316

Query: 329 INF 331
             +
Sbjct: 317 AFY 319

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

 Score =  158 bits (399), Expect = 1e-45
 Identities = 67/315 (21%), Positives = 118/315 (37%), Gaps = 14/315 (4%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
           +     V S + G+P     F+T     EA   AL  +    Y P AG P  R AIA+ L
Sbjct: 26  KAEGIDVCSFSAGEPD----FNTPKHIVEAAKAAL-EQGKTRYGPAAGEPRLREAIAQKL 80

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
            RD       +++ VT+G  Q+I   M  +  PG  +++P P +  Y             
Sbjct: 81  QRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVI 140

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
                +  ++V  + I       T  LV   P NP G VY+   ++ +A+ A +    V+
Sbjct: 141 LPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVL 200

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK 268
           +DE+Y  +++ D   + +G          +     +K + + GWR+G+            
Sbjct: 201 SDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAG-------PV 253

Query: 269 PKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPEL 328
           P V    K       +  TF Q   +    ++   +              + +   +P L
Sbjct: 254 PLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGL 313

Query: 329 INFKSTGSSLKYLDL 343
              K  G+   +  +
Sbjct: 314 ECPKPDGAFYMFPSI 328

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]} Length = 395

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

 Score =  113 bits (283), Expect = 5e-29
 Identities = 83/267 (31%), Positives = 127/267 (47%), Gaps = 5/267 (1%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
           EK   KVI L +GDP     F       EA  +A+  E  N Y  + GLP  R+AI E  
Sbjct: 26  EKKGIKVIRLNIGDPVKFD-FQPPEHMKEAYCKAI-KEGHNYYGDSEGLPELRKAIVERE 83

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
            R     +TP+DV VT+  T+A+ +    L  PG  IL+P P +P Y     F   +   
Sbjct: 84  KRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVE 143

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
           +  + ++ W+ D+DDI       T A+ +INP NP G +Y  + L+++   A + +  VI
Sbjct: 144 YRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVI 203

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270
           +DE+Y  + +  +   P  +    VP++ +  LSK +   GWRLG+    DP       +
Sbjct: 204 SDEIYDLMTYEGEHISPGSLTKD-VPVIVMNGLSKVYFATGWRLGYMYFVDPENKLS--E 260

Query: 271 VVERMKKYFDILGDPATFIQVCIMYGC 297
           V E + +   I   P T  Q   + G 
Sbjct: 261 VREAIDRLARIRLCPNTPAQFAAIAGL 287

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]} Length = 425

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

 Score =  109 bits (272), Expect = 2e-27
 Identities = 36/266 (13%), Positives = 73/266 (27%), Gaps = 43/266 (16%)

Query: 37  VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGL--PLTRRAIAEYLSRDL 94
              +A GD      +   H    AV  +        + P +        + I E      
Sbjct: 58  SADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVG 117

Query: 95  PYKLTPNDVFVTSGCTQAIDVAMALLSR--------PGANILLPRPGFPIYELSAAFRHI 146
                   +    G TQ I   +  LS         P + ++   P +P++     +   
Sbjct: 118 NAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFD- 176

Query: 147 EVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLK 206
                       W  +  +  ++++      ++ +P NP G +                 
Sbjct: 177 -------KKGYVWAGNAANYVNVSNPEQYIEMVTSPNNPEGLLRH--------------A 215

Query: 207 TLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF 266
            +     +Y  + +    + P+         + L ++SK     G R GW +  D     
Sbjct: 216 VIKGCKSIYDMVYYWPH-YTPI--KYKADEDILLFTMSKFTGHSGSRFGWALIKDES--- 269

Query: 267 RKPKVVERMKKYFDILG-DPATFIQV 291
               V   +  Y            Q+
Sbjct: 270 ----VYNNLLNYMTKNTEGTPRETQL 291

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]} Length = 397

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

 Score =  104 bits (259), Expect = 9e-26
 Identities = 49/330 (14%), Positives = 94/330 (28%), Gaps = 24/330 (7%)

Query: 24  LMQSVDDEKNEKKVISLAMG---DPTVHSCFHTTHVATEAVAEAL-----LSEKFNGYAP 75
           LM+   ++    K ++L++G   +              +AVAEA           + Y P
Sbjct: 16  LMERFKEDPRSDK-VNLSIGLYYNEDGI------IPQLQAVAEAEARLNAQPHGASLYLP 68

Query: 76  TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSR----PGANILLPR 131
             GL   R AIA  L       L    V        +  + +         P + + +  
Sbjct: 69  MEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSD 128

Query: 132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL---ADQNTVALVIINPGNPCGN 188
           P +  +    A    EV  +    +    V  +D+ +        ++ L+     NP G 
Sbjct: 129 PTWENHVAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLPARSIVLLHPCCHNPTGA 188

Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP--MGVFGSTVPILTLGSLSKR 246
             +      + E     + +   D  Y     G +        +  + +P L   S SK 
Sbjct: 189 DLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKI 248

Query: 247 WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI 306
           + + G R+G               + +           P  F    +        ++   
Sbjct: 249 FSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASW 308

Query: 307 HGNFLENFAGSCVPSYKLIPELINFKSTGS 336
                E          +L+  L       +
Sbjct: 309 LAEVEEMRTRILAMRQELVKVLSTEMPERN 338

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]} Length = 375

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

 Score =  101 bits (251), Expect = 9e-25
 Identities = 65/286 (22%), Positives = 109/286 (38%), Gaps = 5/286 (1%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
            K  + VI+L  G+P     F T     E     L  +    Y    G+   R  IA+ +
Sbjct: 24  IKKGEDVINLTAGEPD----FPTPEPVVEEAVRFL-QKGEVKYTDPRGIYELREGIAKRI 78

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
                  ++P+ V VT+G  QA+  A   L  PG  +++  P +  Y          V  
Sbjct: 79  GERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNV 138

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
            +    K ++  L+++E L    T A++I +P NP G VY  + L+ L   A K    +I
Sbjct: 139 VETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYII 198

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270
           +DEVY  LV+ D+    + V      I+ +   SK   + GWR+G+ ++++         
Sbjct: 199 SDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSKI 258

Query: 271 VVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAG 316
                     +    A           + T  +            G
Sbjct: 259 QSHTTSCINTVAQYAALKALEVDNSYMVQTFKERKNFVVERLKKMG 304

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]} Length = 418

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (251), Expect = 1e-24
 Identities = 67/324 (20%), Positives = 110/324 (33%), Gaps = 18/324 (5%)

Query: 33  NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE-KFNGYAPTAGLPLTRRAIAEYLS 91
           +E  V++L  G P     F     A EA   A+  +   N Y  T G P   + +A +  
Sbjct: 23  SEHDVVNLGQGFPD----FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFG 78

Query: 92  RDLPYKLTPND-VFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
             L  ++ P   V VT G   A+  A   L   G  +++  P F  YE            
Sbjct: 79  ELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVF 138

Query: 151 FDLLP----------DKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAE 200
             L P             W++D  ++       T ALV+  P NP G V+S + L+ +A 
Sbjct: 139 VSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVAS 198

Query: 201 TANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVT 259
              +   + I DEVY  +V+     + +    G     LT+GS  K +   GW++GW + 
Sbjct: 199 LCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLG 258

Query: 260 TDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCV 319
            D      +      +                             +     ++      +
Sbjct: 259 PDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMI 318

Query: 320 PSYKLIPELINFKSTGSSLKYLDL 343
            S + +         GS     D+
Sbjct: 319 RSLQSVGLKP-LIPQGSYFLITDI 341

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]} Length = 396

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

 Score =  100 bits (249), Expect = 2e-24
 Identities = 44/289 (15%), Positives = 81/289 (28%), Gaps = 12/289 (4%)

Query: 24  LMQSVDDEKNEKKVISLAMGD-PTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT 82
           L      ++   K I+L +G                +A    L +E    Y    G+P  
Sbjct: 16  LADLFRADERPGK-INLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEF 74

Query: 83  RRAIAEYLSRDLPYKLTPND----VFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE 138
            R   E L       +                  +       +     + +  P +P ++
Sbjct: 75  GRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHK 134

Query: 139 LSAAFRHIEVRHFDLLPDKGWEVDLDDIESL---ADQNTVALVIINPGNPCGNVYSYQHL 195
                  +EVR +     +   +D D + +    A    V L      NP G   + +  
Sbjct: 135 SVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQW 194

Query: 196 QKLAETANKLKTLVIADEVYGHLVFGDKPFVP--MGVFGSTVPILTLGSLSKRWIVPGWR 253
           Q LA+ + +   L + D  Y     G +               ++   S SK + +   R
Sbjct: 195 QTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNER 254

Query: 254 LGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIM 302
           +G   T          +   +MK                ++   LS   
Sbjct: 255 VGAC-TLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDA 302

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

 Score = 94.6 bits (234), Expect = 3e-22
 Identities = 30/292 (10%), Positives = 73/292 (25%), Gaps = 19/292 (6%)

Query: 24  LMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--FNGYAPTAGLPL 81
           L+    ++ + +K ++L +G      C          V + + +     + Y P  GL  
Sbjct: 20  LIADFREDPDPRK-VNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAE 78

Query: 82  TRRAIAEYLSRDLPYKL---------TPNDVFVTSGCTQAIDVAMALLSRPGANILLPRP 132
            R   +     D    L         +           + +       +     + +  P
Sbjct: 79  FRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSP 138

Query: 133 GFPIYELSAAFRHIEVRHFDLLPDKGWEV----DLDDIESLADQNTVALVIINPGNPCGN 188
            +  +         +        D                 A + ++ ++     NP G 
Sbjct: 139 TWENHNGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGT 198

Query: 189 VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF---GSTVPILTLGSLSK 245
             + +  +++A    +       D  Y     G+       +         +    S SK
Sbjct: 199 DPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSK 258

Query: 246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGC 297
            + +   R+G               + +  K       +P       +    
Sbjct: 259 NFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTL 310

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]} Length = 401

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

 Score = 92.7 bits (229), Expect = 1e-21
 Identities = 40/246 (16%), Positives = 79/246 (32%), Gaps = 13/246 (5%)

Query: 24  LMQSVDDEKNEKKVISLAMGD-PTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT 82
           + ++   + N KK ++L +G     +   +  +   +A A     +    Y P AGL   
Sbjct: 18  VTEAFKRDTNSKK-MNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADF 76

Query: 83  RRAIAEYLSRDLPYKLTPNDVFVTSG-----CTQAIDVAMALLSRPGANILLPRPGFPIY 137
            RA AE    +              G       +     +    +   ++ LP+P +  +
Sbjct: 77  TRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNH 136

Query: 138 ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA---DQNTVALVIINPGNPCGNVYSYQH 194
                   ++++ +     K   +D            + ++ L+     NP G     + 
Sbjct: 137 TPIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQ 196

Query: 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG---VFGSTVPILTLGSLSKRWIVPG 251
            ++LA    K   L   D  Y     GD               + ++   S +K   + G
Sbjct: 197 WKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYG 256

Query: 252 WRLGWF 257
            R G F
Sbjct: 257 ERAGAF 262

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]} Length = 431

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

 Score = 92.4 bits (228), Expect = 2e-21
 Identities = 53/326 (16%), Positives = 115/326 (35%), Gaps = 31/326 (9%)

Query: 29  DDEKNEKKVISLAMGDPTVHSCF---------HTTHVATEAVAEALLSEKFNGYAPTAGL 79
            +  N   +I + + +  +  CF         +    A +   E++ +E    +    GL
Sbjct: 30  HEVHNTNGIIQMGLAENQL--CFDLLESWLAKNPEAAAFKKNGESIFAELAL-FQDYHGL 86

Query: 80  PLTRRAIAEYLS--RDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIY 137
           P  ++A+ ++++  R       PN + +T+G T A +  +  L+ PG  +L+P P +P +
Sbjct: 87  PAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGF 146

Query: 138 ELSAAFRH-IEVRHFDLLPDKGWEVDLDDIESL------ADQNTVALVIINPGNPCGNVY 190
           +    +R  +E+         G+++    +E         +     +++ NP NP G   
Sbjct: 147 DRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTM 206

Query: 191 SYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM----------GVFGSTVPILTL 240
           +   L  L          +I+DE+Y    F    F+ +                  +  +
Sbjct: 207 TRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVV 266

Query: 241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLST 300
            SLSK   +PG+R+G   + D   +    K+              +  +    +      
Sbjct: 267 YSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLTKNYIA 326

Query: 301 IMQIMIHGNFLENFAGSCVPSYKLIP 326
                +     +  +G        + 
Sbjct: 327 ENHKRLKQRQKKLVSGLQKSGISCLN 352

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

 Score = 92.4 bits (228), Expect = 2e-21
 Identities = 32/299 (10%), Positives = 86/299 (28%), Gaps = 25/299 (8%)

Query: 24  LMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--FNGYAPTAGLPL 81
           + Q    ++   K + L +G     +       + +A  + + ++    + Y    GLP 
Sbjct: 19  IKQRYGQDQRATK-VDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPS 77

Query: 82  TRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL----SRPGANILLPRPGFPIY 137
                A+ +       L  + V      +    + ++        P   + L +P +  +
Sbjct: 78  LTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANH 137

Query: 138 ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT---VALVIINPGNPCGNVYSYQH 194
                 + ++   +    ++   +DL+   +   +     + ++     NP G   + + 
Sbjct: 138 MAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQ 197

Query: 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVP------MGVFGSTVPILTLGSLSKRWI 248
             ++ +       + + D  Y     GD           +    +  P+    S +K   
Sbjct: 198 WVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAG 257

Query: 249 VPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIH 307
           + G R+G F               +   K             +             ++ 
Sbjct: 258 MYGERVGCFHL---------ALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVA 307

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]} Length = 394

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

 Score = 90.8 bits (224), Expect = 5e-21
 Identities = 48/319 (15%), Positives = 94/319 (29%), Gaps = 25/319 (7%)

Query: 24  LMQSVDDEKNEKKVISLAMG-------DPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT 76
           LM     +  + K I L +G          +            A    L +E    YA  
Sbjct: 16  LMGEFRADPRQGK-IDLGVGVYKDATGHTPIMRA------VHAAEQRMLETETTKTYAGL 68

Query: 77  AGLPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFP 135
           +G P  ++A+ E +  D     T      V         + +A ++ P   + +  P +P
Sbjct: 69  SGEPEFQKAMGELILGDGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWP 128

Query: 136 IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL---ADQNTVALVIINPGNPCGNVYSY 192
            +     F  + V+ +     +   VD + +++    A +  + L+     NP G   + 
Sbjct: 129 NHVSIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTL 188

Query: 193 QHLQKLAETANKLKTLVIADEVYGHLVFGDK--PFVPMGVFGSTVPILTLGSLSKRWIVP 250
               ++A    K   L + D  Y     G +        +      +L   S SK + + 
Sbjct: 189 DQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIY 248

Query: 251 GWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNF 310
             R G         +       E  +     L               +ST++        
Sbjct: 249 RERTGCL-----LALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRAD 303

Query: 311 LENFAGSCVPSYKLIPELI 329
                 +       + E +
Sbjct: 304 WMAELEAVRSGMLRLREQL 322

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]} Length = 403

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

 Score = 88.2 bits (217), Expect = 4e-20
 Identities = 53/238 (22%), Positives = 92/238 (38%), Gaps = 9/238 (3%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEAL--LSEKFNGYAPTAGLPLTRRAIAEYLSR 92
             VISLA G P             +   E L   ++K   Y  T G    R A+A ++ +
Sbjct: 29  SDVISLAGGLPAPE--TFPVETIKKIAVEVLEEHADKALQYGTTKGFTPLRLALARWMEK 86

Query: 93  DLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFD 152
                ++  ++   +G  QA+D+   +   PG  I++  P +     +  +   E     
Sbjct: 87  RYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQAFKYYDPEFISIP 146

Query: 153 LLPD----KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTL 208
           L          E  L+++     +  +   +    NP G   S    +KL E AN+   L
Sbjct: 147 LDDKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFL 206

Query: 209 VIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMF 266
           ++ D  Y  L +  +P  P+  F     ++ LG+ SK  + PG+R+GW          
Sbjct: 207 IVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSK-ILAPGFRIGWVAAHPHLIRK 263

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]} Length = 412

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 83.8 bits (205), Expect = 1e-18
 Identities = 90/294 (30%), Positives = 151/294 (51%), Gaps = 12/294 (4%)

Query: 24  LMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR 83
           +  +     + K +I L++GDPT+     T+    + + EA+ S++ NGY PT G P  R
Sbjct: 19  VSDNAKPSPSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAR 78

Query: 84  RAIAEYLSR------DLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIY 137
            A+A +         +L   +  ++V + SG +  I +A+  +   G   L+P+PGFP Y
Sbjct: 79  EAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHY 138

Query: 138 ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQK 197
           E       I +  ++  P+  WE DLD+I  L D  T  L++ NP NPCG+ +S +H++ 
Sbjct: 139 ETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVED 198

Query: 198 LAETANKLKTLVIADEVYGHLVFGDKPFVP----MGVFGSTVPILTLGSLSKRWIVPGWR 253
           +   A +L+  + +DE+Y  +VF  K        +  F +TVP + LG  +K  +VPGWR
Sbjct: 199 IVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWR 258

Query: 254 LGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIH 307
           LGW +  DP G    P  +E +K+   ++  P T +Q  +    L+T  + +  
Sbjct: 259 LGWLLYVDPHGNG--PSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQ 310

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]} Length = 418

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

 Score = 82.9 bits (203), Expect = 3e-18
 Identities = 63/287 (21%), Positives = 110/287 (38%), Gaps = 16/287 (5%)

Query: 33  NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--FNGYAPTAGLPLTRRAIAEYL 90
            + K ++L  G P     +H    A  A+A A  S     N Y    G P   +A+++  
Sbjct: 24  AQYKPLNLGQGFPD----YHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLY 79

Query: 91  SRDLPYKLTPND-VFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVR 149
           S+ +   + P   V VT G  +A+   +      G  +++  P F  YE          R
Sbjct: 80  SQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPR 139

Query: 150 HFDLLPDKG--------WEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAET 201
              L P+K         W +D +++E+L ++ T  ++I  P NP G V     L+ +A  
Sbjct: 140 FIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANL 199

Query: 202 ANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVTT 260
             K   L ++DEVY H+VF     + +    G     +T+GS  K + + GW++GW    
Sbjct: 200 CKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGP 259

Query: 261 DPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIH 307
           +      +      +      + +         +    S        
Sbjct: 260 EALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSI 306

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Length = 428

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

 Score = 82.8 bits (203), Expect = 3e-18
 Identities = 54/320 (16%), Positives = 102/320 (31%), Gaps = 22/320 (6%)

Query: 29  DDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEAL-----LSEKFNGYAPTAGLPLTR 83
              KN   VI + + +  +        +                +    +    GLP  R
Sbjct: 30  HPLKNPNGVIQMGLAENQLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFR 89

Query: 84  RAIAEYLSR--DLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE--- 138
           +AIA+++ +      +  P  V +  G T A +  +  L+ PG   L+P P +P +    
Sbjct: 90  KAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDL 149

Query: 139 -LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT---VALVIINPGNPCGNVYSYQH 194
                 + I +        K     + +    A ++      L++ NP NP G       
Sbjct: 150 RWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDT 209

Query: 195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--------ILTLGSLSKR 246
           L+ +    N+    ++ DE+Y   VF    FV +                +  + SLSK 
Sbjct: 210 LKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKD 269

Query: 247 WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI 306
             +PG+R+G   + +   +    K+              A  +              + +
Sbjct: 270 MGLPGFRVGIIYSFNDDVVNCARKMSSFGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRL 329

Query: 307 HGNFLENFAGSCVPSYKLIP 326
                    G  V   K + 
Sbjct: 330 GKRHKHFTNGLEVVGIKCLK 349

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]} Length = 389

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

 Score = 81.8 bits (200), Expect = 6e-18
 Identities = 63/301 (20%), Positives = 120/301 (39%), Gaps = 9/301 (2%)

Query: 31  EKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYL 90
           +K   ++  L +G P       T  V  E + E     +   Y+ +AG+   R A A Y 
Sbjct: 24  KKRGVRIHHLNIGQPD----LKTPEVFFERIYENK--PEVVYYSHSAGIWELREAFASYY 77

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
            R     + P +V VT+G ++AI  + A+++ PG  IL+  P +  Y   A    +++  
Sbjct: 78  KRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIP 137

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
                ++G+ +   ++ES  ++ T  +V+ NP NP G VY    ++ L E A +    +I
Sbjct: 138 VTRRMEEGFAIP-QNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLI 196

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270
            DEVY  +VF  +    + +    V ++   S+SK++   G R+G  +T +   +    K
Sbjct: 197 VDEVYSEIVFRGEFASALSIESDKVVVID--SVSKKFSACGARVGCLITRNEELISHAMK 254

Query: 271 VVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN 330
           + +       +    +  +                     +              P    
Sbjct: 255 LAQGRLAPPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSGAF 314

Query: 331 F 331
           +
Sbjct: 315 Y 315

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]} Length = 368

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

 Score = 75.5 bits (184), Expect = 7e-16
 Identities = 67/267 (25%), Positives = 98/267 (36%), Gaps = 15/267 (5%)

Query: 32  KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLS 91
                 ++L  G P+            EAV  AL   + + YAP AGLP  R A+AE   
Sbjct: 22  AQRLGAVNLGQGFPS----NPPPPFLLEAVRRAL--GRQDQYAPPAGLPALREALAEE-- 73

Query: 92  RDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHF 151
               + + P  V VTSG T+A+ V +  L  PG  +++  P F +Y   A     + R  
Sbjct: 74  ----FAVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLV 129

Query: 152 DLLPDKGWEV-DLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
            L         DL  +E      T AL++  P NP G V+  + L+ +A  A      +I
Sbjct: 130 RLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLI 189

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPK 270
           +DEVY  L +G++P             +      KR    G+R+GW V            
Sbjct: 190 SDEVYDELYYGERPRRLREFAPERTFTVGSA--GKRLEATGYRVGWIVGPKEFMPRLAGM 247

Query: 271 VVERMKKYFDILGDPATFIQVCIMYGC 297
                      L               
Sbjct: 248 RQWTSFSAPTPLQAGVAEALKLARREG 274

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

 Score = 70.2 bits (170), Expect = 5e-14
 Identities = 57/236 (24%), Positives = 100/236 (42%), Gaps = 8/236 (3%)

Query: 32  KNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLS 91
             + + I+L+ G P     F       E +A  + ++  N YAP  G+   R AIA+   
Sbjct: 23  AQQHQAINLSQGFPD----FDGPRYLQERLAHHV-AQGANQYAPMTGVQALREAIAQKTE 77

Query: 92  RDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
           R   Y+    +D+ VT+G T+A+  A+  L R G  ++   P +  Y  + A     V+ 
Sbjct: 78  RLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKR 137

Query: 151 FDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
              L    + VD  +  +L  + T  +++  P NP   V+       L +     +  VI
Sbjct: 138 MA-LQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVI 196

Query: 211 ADEVYGHLVFGDKPFVPMGVFGSTVP-ILTLGSLSKRWIVPGWRLGWFVTTDPCGM 265
           +DEVY H+ F  +    +          + + S  K + + GW++G+ V   P   
Sbjct: 197 SDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISA 252

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 366

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 68.0 bits (165), Expect = 2e-13
 Identities = 32/273 (11%), Positives = 82/273 (30%), Gaps = 34/273 (12%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
            ++++    D        +       + E   +        +           ++L  D 
Sbjct: 11  LEILNEKGRDALYD---LSGLSGGFLIDEKDKALLNTYIGSSYFAEKVNEYGLKHLGGD- 66

Query: 95  PYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP-RPGFPIYELSAAFRHIEVRHFDL 153
                 +     +  + AI   +  L        LP  PG P  E   + + +  ++F+ 
Sbjct: 67  ----ENDKCVGFNRTSSAILATILALKPKKVIHYLPELPGHPSIE--RSCKIVNAKYFE- 119

Query: 154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE 213
             D      + +I +  D++T+ ++  +  +    V   ++ +K+  TA   + +V  D+
Sbjct: 120 -SD-----KVGEILNKIDKDTLVIITGSTMDL--KVIELENFKKVINTAKNKEAIVFVDD 171

Query: 214 VYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE 273
             G  V       P    G               +V               +  K ++V+
Sbjct: 172 ASGARVRLLFNQPPALKLG-------------ADLVVTSTDKLMEGPRGGLLAGKKELVD 218

Query: 274 RMKKY-FDILGDPATFIQVCIMYGCLSTIMQIM 305
           ++         +    +   I     +  ++ +
Sbjct: 219 KIYIEGTKFGLEAQPPLLAGIYRALKNFNLERI 251

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]} Length = 394

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

 Score = 66.0 bits (159), Expect = 1e-12
 Identities = 49/311 (15%), Positives = 104/311 (33%), Gaps = 11/311 (3%)

Query: 35  KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDL 94
            +V+ L++ D      F       E + + L  E   GY  T      ++ + +++    
Sbjct: 31  NEVVPLSVADME----FKNPPELIEGLKKYL-DETVLGY--TGPTEEYKKTVKKWMKDRH 83

Query: 95  PYKLTPNDVFVTSGCTQAIDVAMALLSRPGANI-LLPRPGFPIYELSAAFRHIEVRHFDL 153
            + +  + +  T+G   A+  A+   ++PG  + ++    +P +          +    L
Sbjct: 84  QWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELL 143

Query: 154 LPDKGWEVDLDDIESL-ADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212
             D  + +D   +E L  D+N  AL+  +P NP G V+    LQK+ +   K   ++ +D
Sbjct: 144 EKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSD 203

Query: 213 EVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272
           E++  L+               +   T+   +         +G           R+    
Sbjct: 204 EIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTK 263

Query: 273 ERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFK 332
            R                      C   +   +   +   N            PE+    
Sbjct: 264 SRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDK--NQRIVKDFFEVNHPEIKAPL 321

Query: 333 STGSSLKYLDL 343
             G+ L+++D 
Sbjct: 322 IEGTYLQWIDF 332

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]} Length = 361

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

 Score = 56.8 bits (135), Expect = 1e-09
 Identities = 17/114 (14%), Positives = 32/114 (28%), Gaps = 6/114 (5%)

Query: 38  ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYK 97
           +   + D      F T     EA+ + L      GY+          AIA + S      
Sbjct: 2   LPFTISDMD----FATAPCIIEALNQRL-MHGVFGYSRWKNDEF-LAAIAHWFSTQHYTA 55

Query: 98  LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHF 151
           +    V         +   +   S  G  +++  P +  +  +       V   
Sbjct: 56  IDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPV 109

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]} Length = 391

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

 Score = 52.2 bits (124), Expect = 3e-08
 Identities = 33/231 (14%), Positives = 75/231 (32%), Gaps = 12/231 (5%)

Query: 72  GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA----MALLSRPGANI 127
           G+     + + R  IA+ +  D      P ++  TSG T++ ++A         + G +I
Sbjct: 43  GWQAEEAVDIARNQIADLVGAD------PREIVFTSGATESDNLAIKGAANFYQKKGKHI 96

Query: 128 LLPRPGFP-IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPC 186
           +  +     + +              L P +   +DL ++E+    +T+ + I++  N  
Sbjct: 97  ITSKTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEI 156

Query: 187 GNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKR 246
           G V     + ++      +   V A +  G L           +  S   I     +   
Sbjct: 157 GVVQDIAAIGEMCRARGII-YHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGAL 215

Query: 247 WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGC 297
           ++    R+         G  R  +           +G+     +  +    
Sbjct: 216 YVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEM 266

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]} Length = 420

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

 Score = 51.7 bits (122), Expect = 5e-08
 Identities = 54/320 (16%), Positives = 104/320 (32%), Gaps = 13/320 (4%)

Query: 33  NEKKVISLAMGDPTVHSCFHTTHVATEAVAEAL--LSEKFNGYAPTAGLPLTRRAIAEYL 90
            +K  IS   G P     F    +A E   E +         Y+ T G P+ ++ I + L
Sbjct: 36  ADKDAISFGGGVPDP-ETFPRKELA-EIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLL 93

Query: 91  SRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRH 150
            R         D  + +  +Q     +  L     +  +      +  ++A  +++    
Sbjct: 94  ERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFV 153

Query: 151 FDLLPDKGWEVDL-------DDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETAN 203
              L D G ++++        D      Q     V+ N  NP G   S +  + L E A 
Sbjct: 154 VVPLEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAE 213

Query: 204 KLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPC 263
           K    ++ D+ YG L +  +   P+   G    ++ L +   + + PG R    V     
Sbjct: 214 KYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNT-FSKVLAPGLR-IGMVAGSKE 271

Query: 264 GMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYK 323
            + +  +  +        +        +            I ++         +    + 
Sbjct: 272 FIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFS 331

Query: 324 LIPELINFKSTGSSLKYLDL 343
            IP +   KS G    +L L
Sbjct: 332 DIPGVKWVKSEGGLFIWLTL 351

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]} Length = 364

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 44.0 bits (102), Expect = 1e-05
 Identities = 25/154 (16%), Positives = 53/154 (34%), Gaps = 12/154 (7%)

Query: 52  HTTHVATEAVAEALLSEKFNGYAPTAGLP------LTRRAIAEYLSRDLPYKLTPNDVFV 105
            T    TE   +ALL E  +GY+            +    I +++   LP  L  +   V
Sbjct: 9   QTGGKLTEEARQALL-EWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCDVARV 67

Query: 106 TSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDD 165
           T+G  +A    M  L++  A +++         ++A    + +          + +  ++
Sbjct: 68  TNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPEN 127

Query: 166 IESLADQNTVA-----LVIINPGNPCGNVYSYQH 194
                ++          +I  P    GN+   + 
Sbjct: 128 FAQTIEETKKRGEVVLALITYPDGNYGNLPDVKK 161

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]} Length = 355

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

 Score = 39.0 bits (89), Expect = 6e-04
 Identities = 42/287 (14%), Positives = 88/287 (30%), Gaps = 16/287 (5%)

Query: 33  NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSR 92
           +  +++  +                  A+ + L  +    Y P A      +A+A +   
Sbjct: 20  SPDQLLDFSANINP----LGMPVSVKRALIDNL--DCIERY-PDADYFHLHQALARH--- 69

Query: 93  DLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFD 152
              +++  + +   +G T++I              ++  PGF  Y  + A    E+R + 
Sbjct: 70  ---HQVPASWILAGNGETESI--FTVASGLKPRRAMIVTPGFAEYGRALAQSGCEIRRWS 124

Query: 153 LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD 212
           L    GW++  D I      +   L +  P NP G +     LQ +A+    L   +I D
Sbjct: 125 LREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILD 183

Query: 213 EVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV 272
           E +   +  +  F+P       + +L   +                        R+ ++ 
Sbjct: 184 EAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQMP 243

Query: 273 ERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCV 319
             +     + G+ A                +       L       V
Sbjct: 244 WSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTV 290

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]} Length = 340

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

 Score = 36.8 bits (83), Expect = 0.003
 Identities = 22/109 (20%), Positives = 33/109 (30%), Gaps = 7/109 (6%)

Query: 59  EAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMA 118
           + +A      +  GY   +      R I E L R         DV   SG TQ   +A +
Sbjct: 18  DLMARDN-MTQHAGYGQDSHCAKAARLIGELLERP------DADVHFISGGTQTNLIACS 70

Query: 119 LLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIE 167
           L  RP   ++  + G      + A      +        G     D   
Sbjct: 71  LALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCPDGKLRVADIES 119

>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]} Length = 376

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Thermotoga maritima [TaxId: 2336]

 Score = 36.6 bits (83), Expect = 0.004
 Identities = 25/152 (16%), Positives = 58/152 (38%), Gaps = 18/152 (11%)

Query: 59  EAVAEALLSEKFN-------GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ 111
           E +      +  N       G      +   R  +A+ L         P+++F TS  T+
Sbjct: 19  EEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVS------PSEIFFTSCATE 72

Query: 112 AIDVAMALLSRPGANILLPRPGFPIYE--LSAAFRHIEVRHFDLL---PDKGWEVDLDDI 166
           +I+  +  ++             PI    +    +++ ++ F +     D    V L+++
Sbjct: 73  SINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEEL 132

Query: 167 ESLADQNTVALVIINPGNPCGNVYSYQHLQKL 198
           E L D++T  + I+   N  G +   + + ++
Sbjct: 133 EKLVDEDTFLVSIMAANNEVGTIQPVEDVTRI 164

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]} Length = 456

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

 Score = 36.3 bits (83), Expect = 0.004
 Identities = 26/216 (12%), Positives = 56/216 (25%), Gaps = 22/216 (10%)

Query: 103 VFVTSGCTQAIDVAMALLSRPGANILLPRPGFP------IYELSAAFRHIEVRHFDLLPD 156
           V    G   A ++   L  +PG  +                  +      +  H   L  
Sbjct: 94  VPTHQG-RGAENLLSQLAIKPGQYVAGNMYFTTTRFHQEKNGATFVDIVRDEAHDASLNL 152

Query: 157 K-GWEVDLDDIESLADQNT-----VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI 210
               ++DL+ + +L  +          + +      G   S  +++ + E A+     + 
Sbjct: 153 PFKGDIDLNKLATLIKEKGAENIAYICLAVTVNLAGGQPVSMANMRAVHEMASTYGIKIF 212

Query: 211 AD--------EVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP 262
            D                G +      +           ++S +        G+    D 
Sbjct: 213 YDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYADGCTMSGKKDCLVNIGGFLCMNDE 272

Query: 263 CGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCL 298
             MF   K +  + +     G  A      +  G  
Sbjct: 273 -EMFSAAKELVVVYEGMPSYGGLAGRDMEAMAIGLR 307

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]} Length = 334

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

 Score = 36.3 bits (82), Expect = 0.004
 Identities = 19/99 (19%), Positives = 34/99 (34%), Gaps = 8/99 (8%)

Query: 20  MLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGL 79
           +  +  ++   E  ++    LA+ +      F       + V   L S+    Y   +  
Sbjct: 4   LDLIAKRAYPYETEKRDKTYLALNENP----FPFPEDLVDEVFRRLNSDALRIY-YDSPD 58

Query: 80  PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMA 118
                 I  YL       L+ N+V V +G  + I V M 
Sbjct: 59  EELIEKILSYLD---TDFLSKNNVSVGNGADEIIYVMML 94

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	343
d1j32a_	388	Aspartate aminotransferase, AAT {Phormidium lapide	100.0
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	100.0
d1xi9a_	395	Putative alanine aminotransferase {Pyrococcus furi	100.0
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	100.0
d1bw0a_	412	Tyrosine aminotransferase (TAT) {Trypanosoma cruzi	100.0
d2r5ea1	418	Kynurenine--oxoglutarate transaminase I {Yellowfev	100.0
d1o4sa_	375	Aspartate aminotransferase, AAT {Thermotoga mariti	100.0
d2gb3a1	389	AAT homologue TM1698 {Thermotoga maritima [TaxId:	100.0
d1w7la_	418	Kynurenine--oxoglutarate transaminase I {Human (Ho	100.0
d1u08a_	382	Putative methionine aminotransferase YdbL {Escheri	100.0
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	100.0
d1c7na_	394	Cystalysin {Treponema denticola [TaxId: 158]}	100.0
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	100.0
d7aata_	401	Aspartate aminotransferase, AAT {Chicken (Gallus g	100.0
d1v2da_	368	Glutamine aminotransferase {Thermus thermophilus [	100.0
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	100.0
d1wsta1	403	Multiple substrate aminotransferase, MSAT {Thermoc	100.0
d1vp4a_	420	Putative aminotransferase TM1131 {Thermotoga marit	100.0
d1yaaa_	412	Aspartate aminotransferase, AAT {Baker's yeast (Sa	100.0
d3tata_	397	Aromatic aminoacid aminotransferase, AroAT {Escher	100.0
d2q7wa1	396	Aspartate aminotransferase, AAT {Escherichia coli	100.0
d1ajsa_	412	Aspartate aminotransferase, AAT {Pig (Sus scrofa),	100.0
d2ay1a_	394	Aromatic aminoacid aminotransferase, AroAT {Paraco	100.0
d1lc5a_	355	L-threonine-O-3-phosphate decarboxylase CobD {Salm	100.0
d2f8ja1	334	Histidinol-phosphate aminotransferase HisC {Thermo	100.0
d1fg7a_	354	Histidinol-phosphate aminotransferase HisC {Escher	100.0
d2hoxa1	425	Alliinase {Garlic (Allium sativum) [TaxId: 4682]}	99.97
d2e7ja1	364	Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl	99.93
d2aeua1	366	Hypothetical protein MJ0158 {Archaeon Methanococcu	99.91
d1p3wa_	391	Cysteine desulfurase IscS {Escherichia coli [TaxId	99.88
d1bs0a_	383	PLP-dependent acyl-CoA synthase (8-amino-7-oxonano	99.86
d1fc4a_	401	2-amino-3-ketobutyrate CoA ligase {Escherichia col	99.84
d1elua_	381	Cystine C-S lyase C-des {Synechocystis sp. [TaxId:	99.84
d2bwna1	396	5-aminolevulinate synthase {Rhodobacter capsulatus	99.84
d1gc0a_	392	Methionine gamma-lyase, MGL {Pseudomonas putida [T	99.8
d1y4ia1	397	Methionine gamma-lyase, MGL {Citrobacter freundii	99.79
d1ibja_	380	Cystathionine beta-lyase, CBL {Thale cress (Arabid	99.78
d1m6sa_	343	Low-specificity threonine aldolase {Thermotoga mar	99.78
d1cs1a_	384	Cystathionine gamma-synthase, CGS {Escherichia col	99.77
d1jf9a_	405	NifS-like protein/selenocysteine lyase {Escherichi	99.76
d1mdoa_	376	Aminotransferase ArnB {Salmonella typhimurium [Tax	99.75
d2ctza1	421	O-acetyl-L-homoserine sulfhydrylase {Thermus therm	99.75
d1qgna_	398	Cystathionine gamma-synthase, CGS {Common tobacco	99.75
d1eg5a_	376	NifS-like protein/selenocysteine lyase {Thermotoga	99.75
d1svva_	340	Low-specificity threonine aldolase {Leishmania maj	99.74
d1cl1a_	391	Cystathionine beta-lyase, CBL {Escherichia coli [T	99.74
d1v72a1	345	Phenylserine aldolase PSALD {Pseudomonas putida [T	99.74
d1b9ha_	384	3-amino-5-hydroxybenzoic acid synthase (AHBA synth	99.74
d1pffa_	331	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.73
d1c7ga_	456	Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 5	99.73
d1t3ia_	408	Probable cysteine desulfurase SufS {Synechocystis	99.7
d1e5ea_	394	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.7
d1ax4a_	465	Tryptophan indol-lyase (tryptophanase) {Proteus vu	99.66
d1n8pa_	393	Cystathionine gamma-lyase (CYS3) {Baker's yeast (S	99.64
d1pmma_	450	Glutamate decarboxylase beta, GadB {Escherichia co	99.62
d1o69a_	374	Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam	99.61
d3bc8a1	445	Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mu	99.56
d2fnua1	371	Spore coat polysaccharide biosynthesis protein C {	99.55
d2z67a1	434	Selenocysteinyl-tRNA synthase (SepSecS) {Methanoco	99.55
d1kl1a_	405	Serine hydroxymethyltransferase {Bacillus stearoth	99.54
d1dfoa_	416	Serine hydroxymethyltransferase {Escherichia coli	99.53
d2byla1	404	Ornithine aminotransferase {Human (Homo sapiens) [	99.52
d1h0ca_	388	Alanine-glyoxylate aminotransferase {Human (Homo s	99.51
d1js3a_	476	DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]	99.51
d1c4ka2	462	Ornithine decarboxylase major domain {Lactobacillu	99.5
d1qz9a_	404	Kynureninase {Pseudomonas fluorescens [TaxId: 294]	99.49
d2v1pa1	467	Tryptophan indol-lyase (tryptophanase) {Escherichi	99.48
d2gsaa_	427	Glutamate-1-semialdehyde aminomutase (aminotransfe	99.47
d1m32a_	361	2-aminoethylphosphonate transaminase {Salmonella t	99.45
d1vefa1	387	Acetylornithine/acetyl-lysine aminotransferase Arg	99.45
d2a7va1	463	Serine hydroxymethyltransferase {Human (Homo sapie	99.44
d2bkwa1	382	Alanine-glyoxylate aminotransferase {Baker's yeast	99.43
d1rv3a_	470	Serine hydroxymethyltransferase {Rabbit (Oryctolag	99.42
d1s0aa_	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.4
d1z7da1	404	Ornithine aminotransferase {Plasmodium yoelii yoel	99.37
d1sffa_	425	4-aminobutyrate aminotransferase, GABA-aminotransf	99.36
d1iuga_	348	Subgroup IV putative aspartate aminotransferase {T	99.29
d1zoda1	431	Dialkylglycine decarboxylase {Pseudomonas cepacia	99.24
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	99.18
d2ch1a1	388	3-hydroxykynurenine transaminase {Malaria mosquito	99.13
d1ohwa_	461	4-aminobutyrate aminotransferase, GABA-aminotransf	99.11
d2c0ra1	361	Phosphoserine aminotransferase, PSAT {Bacillus cir	98.69
d1w23a_	360	Phosphoserine aminotransferase, PSAT {Bacillus alc	98.49
d1bjna_	360	Phosphoserine aminotransferase, PSAT {Escherichia	98.35
d1wyua1	437	Glycine dehydrogenase (decarboxylating) subunit 1	98.34
d1wyub1	471	Glycine dehydrogenase subunit 2 (P-protein) {Therm	97.56
d1ofux_	119	Hypothetical protein PA3008 {Pseudomonas aeruginos	88.98
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	84.09
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	83.36
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	80.69
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	80.42
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	80.33

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

Probab=100.00  E-value=1.3e-54  Score=398.00  Aligned_cols=324  Identities=21%  Similarity=0.294  Sum_probs=281.5

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~   80 (343)
                      |++|+|...++++  ++..+.....+-.   ..+.++|||++|+|+    +++++.++++++++++++ ..+|+++.|.+
T Consensus         1 m~~~~~~~~~~~s--~~~~i~~~a~~~~---~~g~~vi~l~~G~p~----~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~   70 (388)
T d1j32a_           1 MKLAARVESVSPS--MTLIIDAKAKAMK---AEGIDVCSFSAGEPD----FNTPKHIVEAAKAALEQG-KTRYGPAAGEP   70 (388)
T ss_dssp             CCCCHHHHTSCCC--SSTTTHHHHHHHH---TTTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCH
T ss_pred             CchhhHhhcCCcC--HHHHHHHHHHHHH---HCCCCeEECCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCH
Confidence            8999999999999  4333333332222   236789999999964    788999999999998765 45899999999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (343)
                      +||+++++++.+.+|..+++++|++|+|+++++..++++++++||+|++++|+|+.|...++..|.+.+.++...+++|.
T Consensus        71 ~lR~aia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~~~~~v~~~~~~~~~~~  150 (388)
T d1j32a_          71 RLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFK  150 (388)
T ss_dssp             HHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTC
T ss_pred             HHHHHHHHHHHHhcccCCCCceEEEcCCHHHHHHHHHHHHhCCCCEEEEcCCCcHHHHHHHHHhcCeEEEEecccccccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999988888899


Q ss_pred             CCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC--CCCEE
Q 019298          161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS--TVPIL  238 (343)
Q Consensus       161 ~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~--~~~~i  238 (343)
                      +|++++++.++++++++++++||||||.+++.+++++|+++|+++|+++|+||+|..+.+++..+.++.....  .++++
T Consensus       151 ~d~~~l~~~~~~~~~~~~~~~P~NPTG~~~~~~~~~~l~~~~~~~~~~iI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~i  230 (388)
T d1j32a_         151 VSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSV  230 (388)
T ss_dssp             CCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEE
T ss_pred             CCHHHHHHhCCCCCeEEEECCCCCCCCcccchhhhhhhhcccccCCeEEEchhhhhcccccCCCCCCHHHhCccccccee
Confidence            9999999999999999999999999999999999999999999999999999999999998776666554432  25899


Q ss_pred             EEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHH
Q 019298          239 TLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAG  316 (343)
Q Consensus       239 ~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~  316 (343)
                      +++||||+|+++|+|+||++++        +++++.+.+... ...+++...|.++ ...+.+..++++ .++.++++++
T Consensus       231 ~~~S~SK~~~~~GlRvG~~~~~--------~~~~~~~~~~~~~~~~~~~~~~q~a~-~~~~~~~~~~~~~~~~~~~~~~~  301 (388)
T d1j32a_         231 VCSGFAKTYAMTGWRVGFLAGP--------VPLVKAATKIQGHSTSNVCTFAQYGA-IAAYENSQDCVQEMLAAFAERRR  301 (388)
T ss_dssp             EEEESTTTTTCTTTCCEEEECC--------HHHHHHHHHHHHTTTCSCCHHHHHHH-HHHHHSCSHHHHHHHHHHHHHHH
T ss_pred             EecCChhhhhcchhHeEEEEEC--------HHHHHHHHHhhhhccccccHHHHHHH-hhcccchHHHHHHHHHHHHHHHH
Confidence            9999999999999999999985        368887776653 3557788888877 566655556665 8899999999


Q ss_pred             HHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          317 SCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       317 ~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      .+.+.|++++|+.+..|+||+|+|+++
T Consensus       302 ~~~~~l~~~~g~~~~~p~gg~~l~~~l  328 (388)
T d1j32a_         302 YMLDALNAMPGLECPKPDGAFYMFPSI  328 (388)
T ss_dssp             HHHHHHHTCTTCBCCCCCBTTEECCBC
T ss_pred             HHHHHHHhCCCCEecCCCceEEEEEEC
Confidence            999999998899988999999999875

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6.5e-53  Score=386.09  Aligned_cols=320  Identities=24%  Similarity=0.376  Sum_probs=275.2

Q ss_pred             cccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHH
Q 019298            2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPL   81 (343)
Q Consensus         2 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~   81 (343)
                      .+|+|...++||  ++..+....++-.   ..+.++|+|++|+|+    +++++.+++++++++.++. .+|+++.|.++
T Consensus         3 ~~~~r~~~~~~s--~~~~i~~~a~~~~---~~G~~vi~l~~g~p~----~~~p~~i~~a~~~~~~~~~-~~Y~~~~G~~~   72 (382)
T d1b5pa_           3 GLSRRVQAMKPS--ATVAVNAKALELR---RQGVDLVALTAGEPD----FDTPEHVKEAARRALAQGK-TKYAPPAGIPE   72 (382)
T ss_dssp             CCCHHHHHCCCC--HHHHHHHHHHHHH---HTTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTTC-CSCCCTTCCHH
T ss_pred             HHHHHHHhCCCC--HHHHHHHHHHHHH---hCCCCeEECCCCCCC----CCCCHHHHHHHHHHHhcCC-cCCCCCCCCHH
Confidence            589999999999  7777766555433   337889999999965    8889999999999987654 58999999999


Q ss_pred             HHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCC
Q 019298           82 TRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEV  161 (343)
Q Consensus        82 lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  161 (343)
                      ||+++++++.++++..+++++|++|+|+++++..++++++++||.|++++|+|..|...++..|.+++.+++.+++++.+
T Consensus        73 lR~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~l~~~gd~vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~  152 (382)
T d1b5pa_          73 LREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVP  152 (382)
T ss_dssp             HHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC
T ss_pred             HHHHHHhhhhhhcccccccccceecCCHHHHHHHHHHHhCCCCCEEEECCCCcHHHHHHHHHhcCeEEEEecccccccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999988888999


Q ss_pred             CHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEc
Q 019298          162 DLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLG  241 (343)
Q Consensus       162 d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~  241 (343)
                      |++++++.++++++++++|+||||||.+++.+++++|+++|++||+++|+||+|.++.+++....+...  ..+++|+++
T Consensus       153 d~~~l~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~~~i~~~  230 (382)
T d1b5pa_         153 DPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRV--APEHTLTVN  230 (382)
T ss_dssp             CHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGT--CTTTEEEEE
T ss_pred             CHHHHHHhCCCCCeEEEECCCCCCcchhCCHHHHHHHHHHHHHcCeEEEEEccccceecCCCCCCHHHc--CCCCEEEEe
Confidence            999999999989999999999999999999999999999999999999999999999998765544432  235899999


Q ss_pred             cCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchh---hHHHHH-HHHHHHHHHH
Q 019298          242 SLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLST---IMQIMI-HGNFLENFAG  316 (343)
Q Consensus       242 S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~---~~~~l~-~~~~~~~~~~  316 (343)
                      |+||+|+++|+|+||++++        +++++.+..... ...+++...|.++ ...+.+   ...+++ .++.++++++
T Consensus       231 s~SK~~~~~GlR~G~~~~~--------~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (382)
T d1b5pa_         231 GAAKAFAMTGWRIGYACGP--------KEVIKAMASVSRQSTTSPDTIAQWAT-LEALTNQEASRAFVEMAREAYRRRRD  301 (382)
T ss_dssp             ESTTTTTCGGGCCEEEECC--------HHHHHHHHHHHHTTTCSCCHHHHHHH-HHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchhhccCcHhheEEEEEC--------HHHHHHHHHHHHhcccCccccccccc-ccccccccchhHHHHHHHHHHHhhhh
Confidence            9999999999999999985        367887776643 3456677777666 333332   233333 7778888999


Q ss_pred             HHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          317 SCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       317 ~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      .+.+.+... |+.+..|+||+|+|+++
T Consensus       302 ~~~~~l~~~-g~~~~~p~gg~~~~~~~  327 (382)
T d1b5pa_         302 LLLEGLTAL-GLKAVRPSGAFYVLMDT  327 (382)
T ss_dssp             HHHHHHHHH-TCCBCCCSBTTEEEEEC
T ss_pred             HHHHHHhhc-CCeEecCCceEEEeEeC
Confidence            999988887 78888999999999875

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=100.00  E-value=1.4e-51  Score=378.64  Aligned_cols=331  Identities=27%  Similarity=0.433  Sum_probs=274.8

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~   80 (343)
                      ++.|+|..++. .  .++.+.....+-.   ..+.++|+|++|+|... .+++++.+++++.+++.++ .++|+++.|.+
T Consensus         2 ~~~s~r~~~~~-~--~ir~i~~~a~~l~---~~G~~vi~l~~G~P~~~-df~~p~~i~~a~~~a~~~~-~~~Y~~~~G~~   73 (395)
T d1xi9a_           2 IRASKRALSVE-Y--AIRDVVLPARELE---KKGIKVIRLNIGDPVKF-DFQPPEHMKEAYCKAIKEG-HNYYGDSEGLP   73 (395)
T ss_dssp             CCCCHHHHTCC-C---------CHHHHH---HTTCCCEECCCCCGGGT-TCCCCHHHHHHHHHHHHTT-CCSCCCTTCCH
T ss_pred             ccchhccccCc-H--HHHHHHHHHHHHH---HCCCCeEECCCCCCCCC-CCCCCHHHHHHHHHHHhcC-CCCCCCCCCCH
Confidence            57899999974 3  5887775543322   33778999999997532 4889999999999998764 45799999999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (343)
                      +||+++++++++++|..+++++|++|+|+++++..++.+++++||+|++++|+|+.|...++..|.+++.++...+++|.
T Consensus        74 ~LR~aia~~~~~~~g~~~~~~~i~i~~G~~~~~~~~~~~~~~~Gd~vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~  153 (395)
T d1xi9a_          74 ELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQ  153 (395)
T ss_dssp             HHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSE
T ss_pred             HHHHHHHHhhhhcccccccccccccccccchhhhhhhhhhcCCCCEEEEcCCccccchhhhhhcCCEEEEEecccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999988888899


Q ss_pred             CCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEE
Q 019298          161 VDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTL  240 (343)
Q Consensus       161 ~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~  240 (343)
                      +|.+++++.+.++++++++++||||||.+++.+++++|+++|++|++++|+||+|.++.+++... +.......+++|++
T Consensus       154 ~d~~~~~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~~~~vi~~  232 (395)
T d1xi9a_         154 PDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHI-SPGSLTKDVPVIVM  232 (395)
T ss_dssp             ECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCC-CHHHHCSSSCEEEE
T ss_pred             chHHHHHHhhcccccEEEecCCCCCccchhhHHHHHHHHhhhhhcCeeEEecccccccccccccc-chhhcCCCCCEEEE
Confidence            99999999998899999999999999999999999999999999999999999999998876443 33344556789999


Q ss_pred             ccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHH
Q 019298          241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCV  319 (343)
Q Consensus       241 ~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~  319 (343)
                      +||||+|+++|+|+||++++++....  ..+.+..........+++.++|.++ ..++.+..++++ .++.++++++.+.
T Consensus       233 ~S~SK~~~~~GlRvG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~q~a~-~~~l~~~~~~~~~~~~~~~~~~~~l~  309 (395)
T d1xi9a_         233 NGLSKVYFATGWRLGYMYFVDPENKL--SEVREAIDRLARIRLCPNTPAQFAA-IAGLTGPMDYLKEYMKKLKERRDYIY  309 (395)
T ss_dssp             EESTTTTCCGGGCCEEEEEECTTCTT--HHHHHHHHHHHHHTCCSCSHHHHHH-HHHHHSCCHHHHHHHHHHHHHHHHHH
T ss_pred             eCcchhcccchhhcEeeEecCHHHHH--HHHHHHHHHhhcCCCCcCHHHHHHH-HHHhcCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999887654322  1233333233334567788888888 666665566766 8889999999999


Q ss_pred             HhhcCCCCceeeCCCCceEeeecC
Q 019298          320 PSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       320 ~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +.|++++++.+..|+||+|+|+++
T Consensus       310 ~~L~~~~~~~~~~p~gg~~~~~~l  333 (395)
T d1xi9a_         310 KRLNEIPGISTTKPQGAFYIFPKI  333 (395)
T ss_dssp             HHHHTSTTEECCCCCBSSEECCEE
T ss_pred             HHHHhCCCceecCCCeeEEEeEEC
Confidence            999999777888999999999864

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=100.00  E-value=1.1e-50  Score=372.02  Aligned_cols=317  Identities=24%  Similarity=0.380  Sum_probs=272.3

Q ss_pred             ccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHH
Q 019298            3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT   82 (343)
Q Consensus         3 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~l   82 (343)
                      +|.|....+++  .|+.+.+....       .+++|+|++|+|+    +++++.++++++++++++ ..+|+++.|.++|
T Consensus         2 ~s~~~~~~~~s--~ir~~~~~~~~-------~~dvi~l~~g~p~----~~~p~~v~~~~~~a~~~~-~~~Y~~~~G~~~l   67 (388)
T d1gdea_           2 LSDRLELVSAS--EIRKLFDIAAG-------MKDVISLGIGEPD----FDTPQHIKEYAKEALDKG-LTHYGPNIGLLEL   67 (388)
T ss_dssp             HHHHHHHSCCC--HHHHHHHHHHH-------CTTCEECCCCSCC----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHH
T ss_pred             hhhhhhhCCcc--HHHHHHHHHhC-------CCCeEECCCCCCC----CCCCHHHHHHHHHHHhcC-ccCCCCCcCCHHH
Confidence            68888899988  88988775433       4568999999965    788999999999998764 4589999999999


Q ss_pred             HHHHHHHHhhhCCC-CCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCC
Q 019298           83 RRAIAEYLSRDLPY-KLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEV  161 (343)
Q Consensus        83 r~~ia~~~~~~~~~-~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  161 (343)
                      |+++|+|+.++++. ...+++|++|+|+++++..++.+++++||+|++++|+|..|...++..|.+++.+++.++++|.+
T Consensus        68 r~aia~~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~  147 (388)
T d1gdea_          68 REAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRL  147 (388)
T ss_dssp             HHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCC
T ss_pred             HHHHHHHHHhhccccCCChheeeeccCcchHHHHHHHHhcCCCCEEEECCCCcHHHHHHHHHcCCEEEEeecccccCCCC
Confidence            99999999876654 45667999999999999999999999999999999999999999999999999999988889999


Q ss_pred             CHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC-CCCEEEE
Q 019298          162 DLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS-TVPILTL  240 (343)
Q Consensus       162 d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~-~~~~i~~  240 (343)
                      |+++|++.++++++++++++||||||.+++.+++++|+++|++|++++|+||+|.++.+++....++..+.. .+++|++
T Consensus       148 d~~~l~~~~~~~~~~i~~~~P~NPtG~~~s~~~~~~l~~~a~~~~~~vi~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~  227 (388)
T d1gdea_         148 NVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITV  227 (388)
T ss_dssp             CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEE
T ss_pred             CHHHHHHhCccCCeEEEECCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcCChhhhhccCCCCChhhccCCCCeEEEE
Confidence            999999999989999999999999999999999999999999999999999999999988776666665544 3589999


Q ss_pred             ccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhh--HHHHH-HHHHHHHHHH
Q 019298          241 GSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTI--MQIMI-HGNFLENFAG  316 (343)
Q Consensus       241 ~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~--~~~l~-~~~~~~~~~~  316 (343)
                      +||||+|+++|+|+||++++        +++++.+..... ...+++...|.++ ..++.+.  .++++ .++.+++++.
T Consensus       228 ~S~SK~~~~~GlR~G~ii~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~  298 (388)
T d1gdea_         228 NGFSKTFAMTGWRLGFVAAP--------SWIIERMVKFQMYNATCPVTFIQYAA-AKALKDERSWKAVEEMRKEYDRRRK  298 (388)
T ss_dssp             EESTTTTTCGGGCCEEEECC--------HHHHHHHHHHHHTTTCSCCHHHHHHH-HHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred             eCChhhccCccccEEEEEee--------ccchhhhhhccccccccccccchhhH-HHHHhhccchhHHHHHHHHHHHhhh
Confidence            99999999999999999985        367777776653 3556777778777 5555542  22222 7778889999


Q ss_pred             HHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          317 SCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       317 ~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      .+.+.|... ++.+..|+||+|+|+++
T Consensus       299 ~~~~~l~~~-~~~~~~p~gg~fl~~~l  324 (388)
T d1gdea_         299 LVWKRLNEM-GLPTVKPKGAFYIFPRI  324 (388)
T ss_dssp             HHHHHHHHT-TCCCCCCCBTTEECCBC
T ss_pred             hhhhhhhhc-cccccCCCceEEEEEEC
Confidence            999999887 67777999999999975

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=5.6e-50  Score=370.17  Aligned_cols=333  Identities=29%  Similarity=0.481  Sum_probs=273.5

Q ss_pred             cccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHH
Q 019298            2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPL   81 (343)
Q Consensus         2 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~   81 (343)
                      ++|+.. +...+  +++.+.+.+...    ..+.++|+|++|+|+...+..+.+.+.+++++++.....++|++..|.++
T Consensus         4 ~~~~~~-~~~~~--pir~~~~~~~~~----~~~~~vI~L~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~   76 (412)
T d1bw0a_           4 SMSNHA-GLVFN--PIRTVSDNAKPS----PSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPE   76 (412)
T ss_dssp             CCCHHH-HTCCC--HHHHHHHTCCCC----CSCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHH
T ss_pred             Chhhcc-cCCcc--HHHHHHHhcCCC----CCCCCcEECcCCCCCCCCCccccHHHHHHHHHHhhCCCCCCCCCCcCCHH
Confidence            455554 34444  787776655433    33678999999998755556678889999999888777779999999999


Q ss_pred             HHHHHHHHHhhhC------CCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCC
Q 019298           82 TRRAIAEYLSRDL------PYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP  155 (343)
Q Consensus        82 lr~~ia~~~~~~~------~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~  155 (343)
                      ||+++|+|+++++      +..+++++|++|+|+++++..++++++++||+|++++|+|+.|...++..|.+++.+++++
T Consensus        77 LReaia~~~~~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~  156 (412)
T d1bw0a_          77 AREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRP  156 (412)
T ss_dssp             HHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEG
T ss_pred             HHHHHHHHHHHhcCcccccCCCCCCCeEEEecccccchhhhhhhhhccccceeeeeccchhhhhhhhccCcccccccccc
Confidence            9999999999865      3457899999999999999999999999999999999999999999999999999999988


Q ss_pred             CCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccc----cc
Q 019298          156 DKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG----VF  231 (343)
Q Consensus       156 ~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~----~~  231 (343)
                      +++|.++++.+++..++.++++++++||||||.+++.+++++|+++|++|++++|+||+|..+.|++..+.+..    ..
T Consensus       157 ~~~~~~~~~~l~~~~~~~~~~~~l~np~NPtG~~~~~~~~~~i~~~~~~~~~~vi~De~Y~~~~~~~~~~~~~~~~~~~~  236 (412)
T d1bw0a_         157 ENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADF  236 (412)
T ss_dssp             GGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSS
T ss_pred             ccccchhhHHHHhhhhccccccccccccccccccchhhhccccccccccCCeeeechhhHHHhccCCCCCcccccccccc
Confidence            88899999999999988999999999999999999999999999999999999999999999999875443322    22


Q ss_pred             CCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHH
Q 019298          232 GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNF  310 (343)
Q Consensus       232 ~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~  310 (343)
                      +...++++++|+||.|+++|+|+||++++++...  .+.++............++...|.++...++....++++ .++.
T Consensus       237 ~~~~~~~~~~s~SK~~~~~G~RvG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (412)
T d1bw0a_         237 ETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGN--GPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAK  314 (412)
T ss_dssp             CCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCS--CHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHH
T ss_pred             ccccccccccccCccCccCCCCcccccccchhhc--chhhhhhhccccccccCCchhhhhhcccccccccccccccccch
Confidence            3445789999999999999999999999865422  234555555554434455555555552444444455655 8999


Q ss_pred             HHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          311 LENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       311 ~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++++++.+.+.|.+.+|+.+..|+||+|+|+++
T Consensus       315 ~~~~r~~~~~~l~~~~g~~~~~p~gg~~l~~~~  347 (412)
T d1bw0a_         315 IEESAMYLYNHIGECIGLAPTMPRGAMYLMSRI  347 (412)
T ss_dssp             HHHHHHHHHHHHTTSTTEEECCCCBTTEEEEEE
T ss_pred             hHHHHHHHHHHHHHhcCceecCCCCceEEEEeC
Confidence            999999999999887799988999999999763

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=100.00  E-value=2.1e-48  Score=360.06  Aligned_cols=319  Identities=23%  Similarity=0.310  Sum_probs=270.1

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCC
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAG   78 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g   78 (343)
                      |.+++|...++++  .+..+.. +..       ..++|||+.|+|+    +++++.+++++++++.+.  ..++|+++.|
T Consensus         2 ~~~~~~~~~~~~~--~~~~~~~-~~~-------~~~~I~L~~G~Pd----~~~p~~i~eal~~a~~~~~~~~~~Y~~~~G   67 (418)
T d2r5ea1           2 FDLPKRYQGSTKS--VWVEYIQ-LAA-------QYKPLNLGQGFPD----YHAPKYALNALAAAANSPDPLANQYTRGFG   67 (418)
T ss_dssp             CCCCGGGTTCCCC--HHHHHHH-HHH-------HHCCEECSSSCCS----SCCCHHHHHHHHHHHTCSCGGGGSCCCTTC
T ss_pred             CchhhhhcCCCCC--HHHHHHH-Hhc-------CCCCEEccCCCCC----CCCCHHHHHHHHHHHhCCCccCcCCCCCCC
Confidence            5789999999999  4555532 222       2367999999975    677899999999998754  3568999999


Q ss_pred             CHHHHHHHHHHHhhhCCCCCCC-CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCC
Q 019298           79 LPLTRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK  157 (343)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~  157 (343)
                      .++||++||+++.+++|..+++ ++|++|+|+++++..++++++++||.|++++|+|+.|...+...|..++.++++++.
T Consensus        68 ~~~lReaiA~~~~~~~g~~~~p~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~  147 (418)
T d2r5ea1          68 HPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNK  147 (418)
T ss_dssp             CHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEESC
T ss_pred             CHHHHHHHHHHHHHHhCCCCCccceEEEcCCCchhhhhhhhhccccccceeccccccchhhHHHHHcCCeEEEEEecccc
Confidence            9999999999999999988885 899999999999999999999999999999999999999999999999999886643


Q ss_pred             --------CCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccc
Q 019298          158 --------GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG  229 (343)
Q Consensus       158 --------~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~  229 (343)
                              .+.++.+++.......++++++++||||||.+++.+++++|+++|++|++++|+||+|..+.+++....++.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~NPtG~~~s~e~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~s~~  227 (418)
T d2r5ea1         148 TGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRIC  227 (418)
T ss_dssp             CSSCEEGGGEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGG
T ss_pred             cccchhhhhhhhhHHHHhhhhhccccceecCCcCccccccccHHHHHHHhhhhhcCCeeeecccchhhhccCCCcccccc
Confidence                    356788888888888899999999999999999999999999999999999999999999999876655555


Q ss_pred             ccC-CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccch-------h
Q 019298          230 VFG-STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLS-------T  300 (343)
Q Consensus       230 ~~~-~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~-------~  300 (343)
                      .+. ..+++++++|+||.|+++|+|+||++++        +++++.+.+... ...+++.+.|.++ ...+.       .
T Consensus       228 ~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~--------~~~i~~~~~~~~~~~~~~~~~~q~a~-~~~l~~~~~~~~~  298 (418)
T d2r5ea1         228 TLPGMWERTITIGSAGKTFSLTGWKIGWAYGP--------EALLKNLQMVHQNCVYTCATPIQEAI-AVGFETELKRLKS  298 (418)
T ss_dssp             GSTTTGGGEEEEEEHHHHTTCGGGCCEEEESC--------HHHHHHHHHHHTTTTCSCCHHHHHHH-HHHHHHHHTTTTS
T ss_pred             ccccccceeeeeecCCccccCCCccccccccc--------chhhhhhhhcccccccccccchhhhc-ccccccccccccc
Confidence            544 3468999999999999999999999985        378888877654 3556777777766 33322       2


Q ss_pred             hHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          301 IMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       301 ~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ...+++ .++.++++|+.+.+.|+++ |+.+..|+||+|+|+++
T Consensus       299 ~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~P~gg~f~~~~~  341 (418)
T d2r5ea1         299 PECYFNSISGELMAKRDYMASFLAEV-GMNPTVPQGGYFMVADW  341 (418)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHHT-TCEEEECSBSSEEEEEC
T ss_pred             chhhHHHHHHHHHHhhhhHHhhHhhc-CCcccCCCceeEEEEEc
Confidence            234444 8889999999999999998 89988999999999874

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.2e-48  Score=355.11  Aligned_cols=319  Identities=23%  Similarity=0.313  Sum_probs=270.4

Q ss_pred             ccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHH
Q 019298            3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT   82 (343)
Q Consensus         3 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~l   82 (343)
                      +|+|..+.+.+  ....+....++..   ..+.++|||++|+|+    +++++.+++++++++.++. .+|+++.|.++|
T Consensus         1 ~~~r~~~~~~~--~~~~~~~~a~~~~---~~G~~vI~l~~G~p~----~~~p~~i~~~~~~~~~~~~-~~Y~~~~G~~~l   70 (375)
T d1o4sa_           1 VSRRISEIPIS--KTMELDAKAKALI---KKGEDVINLTAGEPD----FPTPEPVVEEAVRFLQKGE-VKYTDPRGIYEL   70 (375)
T ss_dssp             CCHHHHHSCCC--SSHHHHHHHHHHH---HTTCCCEECCCSSCS----SCCCHHHHHHHHHHHTTCC-CCCCCTTCCHHH
T ss_pred             CchhhhhCCCC--HHHHHHHHHHHHH---HCCCCeEECCCcCCC----CCCCHHHHHHHHHHHhcCC-cCCCCCcCCHHH
Confidence            58889999988  4455555444443   337789999999965    7788999999999887654 579999999999


Q ss_pred             HHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCC
Q 019298           83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD  162 (343)
Q Consensus        83 r~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d  162 (343)
                      |+++++++.+.++..+++++|++|+|+++++..++++++++||.|++++|+|+.|...+...+.....++...++++.+|
T Consensus        71 R~aia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (375)
T d1o4sa_          71 REGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPS  150 (375)
T ss_dssp             HHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCC
T ss_pred             HHHHHhhhhhccccccccccccccCcHHHHHHHHHHHHhCCCCEEEEccCccccchhhhhccccccccccccccccccch
Confidence            99999999998999999999999999999999999999999999999999999999999999999999999888889999


Q ss_pred             HHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEcc
Q 019298          163 LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS  242 (343)
Q Consensus       163 ~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S  242 (343)
                      .+.++.....+++++++++||||||.+++.+++++|+++|++|+++||+||+|..+.++......+...+..+++++++|
T Consensus       151 ~~~~~~~~~~~~~~~~l~nP~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S  230 (375)
T d1o4sa_         151 LEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYING  230 (375)
T ss_dssp             HHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEE
T ss_pred             hHHHHHhhccCccEEEEeCCCCCccCCCCHHHHHHHHHhHHHcCCceehHhhhccccccccccccccccCCCCCEEEEee
Confidence            99999988889999999999999999999999999999999999999999999999887766555555566789999999


Q ss_pred             CccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHh
Q 019298          243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPS  321 (343)
Q Consensus       243 ~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~  321 (343)
                      +||+|+++|+|+||+++++        ++++.+...... ....+...+... ...+.  ......++.++++++.+.+.
T Consensus       231 ~SK~~~l~G~R~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~r~~~~~~~  299 (375)
T d1o4sa_         231 FSKSHSMTGWRVGYLISSE--------KVATAVSKIQSHTTSCINTVAQYAA-LKALE--VDNSYMVQTFKERKNFVVER  299 (375)
T ss_dssp             STTTTTCGGGCCEEEECCH--------HHHHHHHHHHHHHTCSCCHHHHHHH-HHHTT--CCCHHHHHHHHHHHHHHHHH
T ss_pred             chhhccCCccccccccccc--------cchhhhhhhhccccccccccchhhh-hhhcc--cchhhhHHHHHHHHHHHHHH
Confidence            9999999999999999863        677766655432 345555656555 22222  11122777888999999999


Q ss_pred             hcCCCCceeeCCCCceEeeecC
Q 019298          322 YKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       322 L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      |+.+ |+.+..|+||+|+|+++
T Consensus       300 l~~~-g~~~~~p~gg~f~~~~~  320 (375)
T d1o4sa_         300 LKKM-GVKFVEPEGAFYLFFKV  320 (375)
T ss_dssp             HHHT-TCCCCCCSBSSEEEEEC
T ss_pred             HHhc-CceEecCCccEEEEEEC
Confidence            9988 89988999999999875

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=5.2e-48  Score=354.31  Aligned_cols=319  Identities=22%  Similarity=0.288  Sum_probs=267.8

Q ss_pred             ccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHH
Q 019298            3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLT   82 (343)
Q Consensus         3 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~l   82 (343)
                      +|+|..+..++  +|+++.....+..   ..+.++|+|+.|+|+    +++++.+.++++++..  ...+|+++.|.++|
T Consensus         1 ~~~r~~~~~~~--~i~~l~~~a~~~~---~~g~~vi~l~~G~p~----~~~p~~~~~al~~~~~--~~~~Y~~~~G~~~L   69 (389)
T d2gb3a1           1 FSDRVLLTEES--PIRKLVPFAEMAK---KRGVRIHHLNIGQPD----LKTPEVFFERIYENKP--EVVYYSHSAGIWEL   69 (389)
T ss_dssp             CCHHHHSCCCC--TTGGGHHHHHHHH---HTTCEEEECSSCCCC----SCCCTHHHHHHHHTCC--SSCCCCCTTCCHHH
T ss_pred             CChhhhcCCCC--HHHHHHHHHHHHH---HcCCCEEECCCCCCC----CCCCHHHHHHHHhcCC--CCCCCCCCcCCHHH
Confidence            68999999999  8888876543332   237889999999975    7788999999887643  45689999999999


Q ss_pred             HHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCC
Q 019298           83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD  162 (343)
Q Consensus        83 r~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d  162 (343)
                      |+++++|+.+++|..+++++|++|+|+++++..++.+++++||.|++++|+|+.+...+...|.....++...+. +..+
T Consensus        70 R~aia~~~~~~~g~~~~~~~I~it~G~~~~l~~~~~~l~~~gd~V~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~-~~~~  148 (389)
T d2gb3a1          70 REAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEE-GFAI  148 (389)
T ss_dssp             HHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGG-TSCC
T ss_pred             HHHHHHHHHHhcCCCcccceEEecccccccccccccccccCCCeEEEeCCCCccccccccccCcccccccccccc-ccch
Confidence            999999999999999999999999999999999999999999999999999999999999999999988876543 3445


Q ss_pred             HHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEcc
Q 019298          163 LDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS  242 (343)
Q Consensus       163 ~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S  242 (343)
                      .+.+.....++++++++++||||||.+++.+++++|+++|++|++++|+||+|..+.+++.......  ...++++++.|
T Consensus       149 ~~~~~~~~~~~~~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~--~~~~~~~v~~s  226 (389)
T d2gb3a1         149 PQNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALS--IESDKVVVIDS  226 (389)
T ss_dssp             CTTGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGG--SCCTTEEEEEE
T ss_pred             hhhhhhhcccCccEEEeCCCCccccccchHHHHHHHHhhcccCCEEEEEeccccccccccccccccc--ccccccccccc
Confidence            5666677777899999999999999999999999999999999999999999999998876443332  23468899999


Q ss_pred             CccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHh
Q 019298          243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPS  321 (343)
Q Consensus       243 ~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~  321 (343)
                      +||.|+++|+|+||+++++       +.+.+..........+++...+.++ ..++....++++ .++.++++++.+.+.
T Consensus       227 ~sK~~~~~GlRiG~~~~~~-------~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~  298 (389)
T d2gb3a1         227 VSKKFSACGARVGCLITRN-------EELISHAMKLAQGRLAPPLLEQIGS-VGLLNLDDSFFDFVRETYRERVETVLKK  298 (389)
T ss_dssp             STTTTTCGGGCCEEEECSC-------HHHHHHHHHHHHHSCCCCHHHHHHH-HHHHTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccCcccceeeeeccc-------hhHHHHHhhhhhccccccccccccc-cccccccchhcccccccccccchhhhhh
Confidence            9999999999999999864       3455555555544556677777776 666665566666 889999999999999


Q ss_pred             hcCCCCceeeCCCCceEeeecC
Q 019298          322 YKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       322 L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      |+++++..+..|++|+|+|+++
T Consensus       299 L~~~~~~~~~~p~~g~~~~~~l  320 (389)
T d2gb3a1         299 LEEHGLKRFTKPSGAFYITAEL  320 (389)
T ss_dssp             HHHTTCCCBCCCSBSSEEEEEC
T ss_pred             hhhhccccccCCCceEEEEEeC
Confidence            9999555577899999999975

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.9e-48  Score=355.82  Aligned_cols=317  Identities=22%  Similarity=0.353  Sum_probs=268.9

Q ss_pred             ccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC-CCCCCCCCCCCHH
Q 019298            3 ISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE-KFNGYAPTAGLPL   81 (343)
Q Consensus         3 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~   81 (343)
                      .++|..++.++  ++..+....   .     +.++|||++|.|+    +++++.+++++++++.++ ..++|++..|.++
T Consensus         3 ~~~r~~~~~~~--~~~~~~~~~---~-----~~dvI~l~~G~p~----~~~p~~v~~a~~~al~~~~~~~~Y~~~~G~~~   68 (418)
T d1w7la_           3 QARRLDGIDYN--PWVEFVKLA---S-----EHDVVNLGQGFPD----FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPP   68 (418)
T ss_dssp             SCGGGTTCCCC--THHHHHHHH---H-----TSCCEECCCCSCS----SCCCHHHHHHHHHHTSSCGGGGSCCCTTCCHH
T ss_pred             cCccccCCCCC--HHHHHHHHh---C-----CCCCEECCCCCCC----CCCCHHHHHHHHHHHhCCCcccCCCCCcCCHH
Confidence            36777777777  665554421   1     5679999999965    778899999999998765 3568999999999


Q ss_pred             HHHHHHHHHhhhCCCCCCC-CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCC-----
Q 019298           82 TRRAIAEYLSRDLPYKLTP-NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP-----  155 (343)
Q Consensus        82 lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-----  155 (343)
                      ||+++++++++++|..+++ ++|++|+|++++|..++++++++||.|++++|+|+.|...+...|.+.+.++..+     
T Consensus        69 LReaia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~g~~vlv~~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~  148 (418)
T d1w7la_          69 LTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQN  148 (418)
T ss_dssp             HHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECC---
T ss_pred             HHHHHHHHHHHHhCCCCCcccceeeccCcHHHHHHHHHhhccCCceeeccccccchhHHHHHHcCCEeeccccccccccc
Confidence            9999999999988988885 6899999999999999999999999999999999999999999999988887654     


Q ss_pred             -----CCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccc
Q 019298          156 -----DKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV  230 (343)
Q Consensus       156 -----~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~  230 (343)
                           +.++.+|.+++.....+.++++++++||||||.+++.+++++|+++|+++++++|+||+|.++.|++..+.++..
T Consensus       149 ~~~~~~~~~~~d~~~~~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~i~~~a~~~~v~vI~De~Y~~l~~~~~~~~~~~~  228 (418)
T d1w7la_         149 GELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIAS  228 (418)
T ss_dssp             CCSEEGGGEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGG
T ss_pred             cccccccCcccchhhhhccccccccceeccCcCCcccccccHHHHHHHHHHHHhcCCCchhhhhhHHhhcCCCCCCCHHH
Confidence                 235667888888888888899999999999999999999999999999999999999999999998877666666


Q ss_pred             cCC-CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhH------
Q 019298          231 FGS-TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIM------  302 (343)
Q Consensus       231 ~~~-~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~------  302 (343)
                      +.. .++++++.|+||.|+++|+|+||++++        +++++.+++... ...+++.+.|.++ ..+|.+..      
T Consensus       229 ~~~~~~~~i~~~S~SK~~~~pG~RvG~~v~~--------~~~~~~l~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~  299 (418)
T d1w7la_         229 LPGMWERTLTIGSAGKTFSATGWKVGWVLGP--------DHIMKHLRTVHQNSVFHCPTQSQAAV-AESFEREQLLFRQP  299 (418)
T ss_dssp             STTTGGGEEEEEEHHHHTTCGGGCCEEEECC--------HHHHHHHHHHHHTTTSCCCHHHHHHH-HHHHHHHHHTTTST
T ss_pred             ccccccccceecccCccccCCCCcccccccc--------hhhhhhhccccccccccccchhhHHH-HHHhhhcccccccc
Confidence            654 358999999999999999999999996        368888887764 3567788888777 44544322      


Q ss_pred             -HHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          303 -QIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       303 -~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                       .++. .++.++++++.+.+.|+++ |+.+..|+||+|+|+++
T Consensus       300 ~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~P~gg~f~~~~~  341 (418)
T d1w7la_         300 SSYFVQFPQAMQRCRDHMIRSLQSV-GLKPLIPQGSYFLITDI  341 (418)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHTT-TCEEEECSBSSEEEEEC
T ss_pred             ccccccchhhhhhhhhhhhhhhhhc-CCcccCCCceeEEEEEC
Confidence             2333 7888999999999999998 89988999999999875

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.6e-45  Score=332.68  Aligned_cols=294  Identities=22%  Similarity=0.350  Sum_probs=256.3

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQA  112 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~a  112 (343)
                      +.++|||+.|.|+    +++++.+++++.+++.++ .++|++..|.++||+++|+++++++|..+.++ +|++|+|++++
T Consensus        25 ~~~~i~l~~G~Pd----~~~p~~i~~a~~~~~~~~-~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~~I~vt~G~~~a   99 (382)
T d1u08a_          25 QHQAINLSQGFPD----FDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEA   99 (382)
T ss_dssp             HTTCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHH
T ss_pred             cCCCEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCcCCHHHHHHHHHHHHHHhCCCCCCCceEEeccchHHH
Confidence            4578999999975    778899999999998764 46899999999999999999999899888877 59999999999


Q ss_pred             HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       113 l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~  192 (343)
                      +..++++++++||.|++++|+|+.+...+...|..+..++.. ++++.+|++++++.++++++++++++||||||.+++.
T Consensus       100 l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~~~~~i~l~~P~NPtG~v~~~  178 (382)
T d1u08a_         100 LYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQ-PPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQ  178 (382)
T ss_dssp             HHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECC-TTTCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred             HHHHHhhcccccceEEEecccccchhhhhhhccccceecccc-cccccCCHHHHhhhhccCccEEEECCCCccccccccc
Confidence            999999999999999999999999999999999888877764 4667899999999999899999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccccc-CCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHH
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKV  271 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~  271 (343)
                      +++++|+++|++++++++.|+.|..+.+.+......... ...+++|++.|+||.|+++|+|+||++++        +++
T Consensus       179 ~~~~~l~~~~~~~~~~ii~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~pG~RiG~~v~~--------~~~  250 (382)
T d1u08a_         179 ADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAP--------API  250 (382)
T ss_dssp             HHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECC--------HHH
T ss_pred             ccchhhhhhhccccceeeeecchhhccccccccccccccccccCcEEEEeeccccccCCcccchhhhcc--------chh
Confidence            999999999999999999999999988876544433322 23458999999999999999999999985        368


Q ss_pred             HHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          272 VERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       272 ~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++++.+... ...+++.+.|.++ ..++.+..++++ .++.++++++.+.+.++.. |+.+..|+||+|+|+++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~q~a~-~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~~p~gg~~~~~~~  322 (382)
T d1u08a_         251 SAEIRKVHQYLTFSVNTPAQLAL-ADMLRAEPEHYLALPDFYRQKRDILVNALNES-RLEILPCEGTYFLLVDY  322 (382)
T ss_dssp             HHHHHHHHHHHTSSCCHHHHHHH-HHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSS-SCEECCCCBSSEEEEEC
T ss_pred             HHHHHhhhccccccccccccccc-ccccccchHHHHHHHHHHHhhhhhhhhhhccC-CcEEecCCceEEEEEec
Confidence            888877754 3568888999988 666665566666 9999999999999998876 89988999999999875

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=100.00  E-value=2.6e-45  Score=340.40  Aligned_cols=326  Identities=17%  Similarity=0.263  Sum_probs=247.8

Q ss_pred             ccCccccCcCc-cccHHHHHHHHHh-hccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhc-----------CC
Q 019298            3 ISNGGIDNTGS-IITIKGMLSLLMQ-SVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLS-----------EK   69 (343)
Q Consensus         3 ~s~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~-----------~~   69 (343)
                      +|+|++-..-. ..+-..-...+.. ..+...++.++|+|+++++.     ...+.+.+.+.+....           ..
T Consensus         2 ~~~~~~~~~~~~~s~y~~g~~~~~~~~~~~~~np~G~i~l~~~en~-----l~~d~~~~~l~~~~~~~~~~~~~~~~~~~   76 (431)
T d1m7ya_           2 LSRNATFNSHGQDSSYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQ-----LCFDLLESWLAKNPEAAAFKKNGESIFAE   76 (431)
T ss_dssp             CCSTTC-------CHHHHHHHHHHHSBCCSSSCTTSBEECSSCCCC-----SCHHHHHHHHHHCCTGGGTEETTEECHHH
T ss_pred             cchhhcccCCccCCchhhhhhhhhcCCCCCcCCCCcEEEeeccccc-----ccHHHHHHHHHhCCchhhhhhhhhhccHH
Confidence            68888733321 1133332233322 34444556779999999832     2456666655542110           01


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHhhhCCC--CCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh-cCc
Q 019298           70 FNGYAPTAGLPLTRRAIAEYLSRDLPY--KLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF-RHI  146 (343)
Q Consensus        70 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~--~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~-~g~  146 (343)
                      ...|+++.|.++||+++|+|+++++|.  .+++++|++|+|++++|..+++++++|||+|++++|+|+.+...+.. .|.
T Consensus        77 ~~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~~~pe~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~~~~~~~~~~g~  156 (431)
T d1m7ya_          77 LALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGV  156 (431)
T ss_dssp             HHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCC
T ss_pred             hcCCcCCcCcHHHHHHHHHHHHHHhCCCCCCCcceEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHhcCc
Confidence            236999999999999999999998874  56789999999999999999999999999999999999998887764 578


Q ss_pred             eeEEeecCCCCCCCCCHHHHHhhhcC------CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCcccc
Q 019298          147 EVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF  220 (343)
Q Consensus       147 ~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~  220 (343)
                      +++.++++.++++.+|.+.+++.+.+      ++++++++|||||||.+++.+++++|+++|++||+++|+||+|+.+.|
T Consensus       157 ~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~nP~NPtG~~~s~~~l~~i~~~a~~~~~~vI~De~Y~~~~~  236 (431)
T d1m7ya_         157 EIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAF  236 (431)
T ss_dssp             EEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCC
T ss_pred             eeccccccchhcccccHHHhhhhhhhhhhccCcceEEEecCccccccccccccccccccccccccCcceeeccccccccc
Confidence            99999998888899999999876642      567899999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcccccC----------CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHH
Q 019298          221 GDKPFVPMGVFG----------STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQ  290 (343)
Q Consensus       221 ~~~~~~~~~~~~----------~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  290 (343)
                      ++..+.++..+.          ..+++++++|+||.|+++|+|+||+++++        +++............++...+
T Consensus       237 ~~~~~~s~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~RiG~~~~~~--------~~i~~~~~~~~~~~~~~~~~~  308 (431)
T d1m7ya_         237 SSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSND--------DMVVAAATKMSSFGLVSSQTQ  308 (431)
T ss_dssp             SSSCCCCHHHHTTTTTCSSSSSGGGGEEEEEESSSSSCCGGGCEEEEEESC--------HHHHHHHHHHGGGSCCCHHHH
T ss_pred             CCCCCCCHHHHhhhcccccccccCceEEEEecCcccccCCCCccceeccch--------hhhHHHHHHHhcccccccccc
Confidence            877655443321          12579999999999999999999999864        444444333333445555556


Q ss_pred             HHHHhccchhh---HHHHH-HHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          291 VCIMYGCLSTI---MQIMI-HGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       291 ~a~~~~~l~~~---~~~l~-~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      .++ .+.+.+.   .++++ .+++++++++.+.+.|++. |+.+..|+||+|+|+++
T Consensus       309 ~~~-~a~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-gi~~~~p~gg~f~w~~l  363 (431)
T d1m7ya_         309 HLL-SAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS-GISCLNGNAGLFCWVDM  363 (431)
T ss_dssp             HHH-HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEECCCCSSSEEEEEC
T ss_pred             chh-hhhhccchhhhhhhhhhhhhhhhhhhhhhhhhhcC-CcEEecCCceeEEEEEC
Confidence            555 3444332   33444 8888999999999999886 89988999999999975

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

Probab=100.00  E-value=3.1e-45  Score=336.18  Aligned_cols=296  Identities=18%  Similarity=0.294  Sum_probs=243.7

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      +.++|+|++|+|+    +++++.++++++++++++. .+|++  |.++||+++++|+++++|..+++++|++|+|+++++
T Consensus        30 g~~vi~l~~g~pd----f~~p~~v~~al~~~~~~~~-~~Y~~--g~~~Lr~aia~~~~~~~g~~~~~~~I~vt~G~~~al  102 (394)
T d1c7na_          30 GNEVVPLSVADME----FKNPPELIEGLKKYLDETV-LGYTG--PTEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAV  102 (394)
T ss_dssp             CTTCCCCCSSSCS----SCCCHHHHHHHHHHHHHCC-CSSBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHH
T ss_pred             CCCeEEccCCCCC----CCCCHHHHHHHHHHHhCCC-cCCCC--CCHHHHHHHHHHHHHhcCCCCCCcceEeeccchhhh
Confidence            6789999999965    8999999999999987653 47854  789999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCC-CCCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccC
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP-DKGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYS  191 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~  191 (343)
                      ..++++++++||.|++++|.|..+.......|...+.++... +..+.+|.+.++..... +++++++++||||||.+++
T Consensus       103 ~~~~~~~~~pgd~vi~~~p~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~d~~~~~~~~~~~~~~~i~l~~P~NPTG~v~s  182 (394)
T d1c7na_         103 FNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWK  182 (394)
T ss_dssp             HHHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCC
T ss_pred             hhhhccccccccccccccCcccchhhHHhhhhhcccccccccccccccchhhhhhhhhccccceEEEecccccccceecc
Confidence            999999999999999999999999999999999988877654 34566888988887754 6889999999999999999


Q ss_pred             HHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC--CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCch
Q 019298          192 YQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG--STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKP  269 (343)
Q Consensus       192 ~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~--~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~  269 (343)
                      .+++++|+++|++++++||+||+|.++.+++....+.....  ...+++++.|+||+|+++|+|+||+++++       +
T Consensus       183 ~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~R~g~~~~~~-------~  255 (394)
T d1c7na_         183 KDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKN-------P  255 (394)
T ss_dssp             HHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCC-------H
T ss_pred             HHHhhhhhccccccceeEeccccccccccCCccccchhhhhcccccceeecccccccccccccccccccccC-------h
Confidence            99999999999999999999999999999876554433332  23589999999999999999999999964       4


Q ss_pred             HHHHHHhhhhccc-cCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcC-CCCceeeCCCCceEeeecC
Q 019298          270 KVVERMKKYFDIL-GDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKL-IPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       270 ~~~~~l~~~~~~~-~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~-~~g~~~~~~~~g~~~~~~l  343 (343)
                      .+.+.+....... ..+....+.++.........++.+ .++.++++++.+.+.++. .+++.+..|+||+|+|+++
T Consensus       256 ~i~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~g~~~~~~~~  332 (394)
T d1c7na_         256 DIRERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDF  332 (394)
T ss_dssp             HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEEC
T ss_pred             hhhhhhhhhhhhccccccccccchhhhhhhcchhhhhcccccccchhhhhhhhhhhccccceeecCCCceeEEEEEC
Confidence            5777776665432 233333333331334334455555 777888888888888875 5688888899999999875

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=100.00  E-value=2.1e-44  Score=333.96  Aligned_cols=302  Identities=19%  Similarity=0.327  Sum_probs=241.4

Q ss_pred             hccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC----------CCCCCCCCCCCHHHHHHHHHHHhhhCCC
Q 019298           27 SVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE----------KFNGYAPTAGLPLTRRAIAEYLSRDLPY   96 (343)
Q Consensus        27 ~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~Y~~~~g~~~lr~~ia~~~~~~~~~   96 (343)
                      ..++..++.++|+|+++++     ......+.+.+.+.....          ...+|+++.|.++||++||+|+++++|.
T Consensus        28 ~~~~~~np~G~i~l~~aen-----~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aiA~~l~~~~~~  102 (428)
T d1iaya_          28 PFHPLKNPNGVIQMGLAEN-----QLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGG  102 (428)
T ss_dssp             BCCSSSSTTSBEECSSCCC-----CSSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTT
T ss_pred             CCCCcCCCCceEEeecccC-----ccchHHHHHHHHhCCchhhhHhHhhhCHHhccCcCCcchHHHHHHHHHHHHHHhCC
Confidence            3445556788999999983     234555655554422110          1246999999999999999999998875


Q ss_pred             --CCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh-cCceeEEeecCCCCCCCCCHHHHHhhh---
Q 019298           97 --KLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF-RHIEVRHFDLLPDKGWEVDLDDIESLA---  170 (343)
Q Consensus        97 --~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~~~l~~~~---  170 (343)
                        .+++++|++|+|+++++..++++++++||+|++++|+|+.+...+.. .|.+++.++++.++++.+|.+.++.++   
T Consensus       103 ~~~~~~e~Ivit~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~~~~~~~~~  182 (428)
T d1iaya_         103 RVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENA  182 (428)
T ss_dssp             CSCCCTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHH
T ss_pred             CCCCChhhEEEcCCHHHHHHHHHHHhCCCCCEEEEccCCchHHHHHHHHhcCCeEEEeecccccccccccccccchhhhh
Confidence              46789999999999999999999999999999999999999877764 488999999988889999999887543   


Q ss_pred             ---cCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccccc--------CCCCCEEE
Q 019298          171 ---DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF--------GSTVPILT  239 (343)
Q Consensus       171 ---~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~--------~~~~~~i~  239 (343)
                         ..+++++++++||||||.+++.+++++|+++|++||+++|+||+|..++|++..+.++..+        ...+++++
T Consensus       183 ~~~~~~~~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~vi~  262 (428)
T d1iaya_         183 QKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHI  262 (428)
T ss_dssp             HHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEE
T ss_pred             hccCCCceEEEEccCCCcccccccccccchhheeeccCcEEEEecccccccccCcccccccccccchhhccccccceEEE
Confidence               2367889999999999999999999999999999999999999999999988765554332        23468999


Q ss_pred             EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHHHHHHHhccchh---hHHHHH-HHHHHHHHH
Q 019298          240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQVCIMYGCLST---IMQIMI-HGNFLENFA  315 (343)
Q Consensus       240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~---~~~~l~-~~~~~~~~~  315 (343)
                      ++||||.|+++|+|+||+++++       +.+.+.++.... ....+...+.++ .+.+..   ...+++ .++.+++++
T Consensus       263 ~~s~SK~~~~~GlRiG~~~~~~-------~~l~~~~~~~~~-~~~~~~~~~~~~-~a~l~~~~~~~~~~~~~~~~l~~r~  333 (428)
T d1iaya_         263 VYSLSKDMGLPGFRVGIIYSFN-------DDVVNCARKMSS-FGLVSTQTQYFL-AAMLSDEKFVDNFLRESAMRLGKRH  333 (428)
T ss_dssp             EEESTTTSSCGGGCEEEEEESC-------HHHHHHHHHHHT-TSCCCHHHHHHH-HHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             EecCCCcccCCCcccccccccc-------cchhhhhhhhhc-ccccccccccch-hhhhhhhccccccccccccccchhH
Confidence            9999999999999999999854       356676666554 344555556555 333332   233444 788899999


Q ss_pred             HHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          316 GSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       316 ~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +.+.+.|+.. |+.+..|+||+|+|+++
T Consensus       334 ~~~~~~L~~~-gi~~~~p~gg~f~w~~l  360 (428)
T d1iaya_         334 KHFTNGLEVV-GIKCLKNNAGLFCWMDL  360 (428)
T ss_dssp             HHHHHHHHHT-TCCBCCCSSSSEEEEEC
T ss_pred             HHHHHHHHhC-CCEEecCCcceEEEEEC
Confidence            9999999876 89988999999999975

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=100.00  E-value=5.8e-45  Score=335.15  Aligned_cols=324  Identities=15%  Similarity=0.103  Sum_probs=255.7

Q ss_pred             cccCcCccccHHHHHHHHHhhccccccccceeEeccCCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHH
Q 019298            7 GIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPT-VHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRA   85 (343)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~   85 (343)
                      ....|++  +|+.++..++++.     .+++|||++|.+. .....+..+.+++++.+...++..++|+++.|.++||++
T Consensus         7 ~~~~p~d--~i~~~~~~~~~d~-----~~~~InL~iG~~~d~~~~~~~~~~V~~a~~~~~~~~~~~~Y~~~~G~~~lr~a   79 (401)
T d7aata_           7 VEMGPPD--PILGVTEAFKRDT-----NSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRA   79 (401)
T ss_dssp             CCCCCCC--HHHHHHHHHHHCC-----CTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHH
T ss_pred             CCCCCCC--hHHHHHHHHhCCC-----CCCcEEccCCCCcCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHH
Confidence            4566766  8999999888766     5678999999632 223356679999999998887777789999999999999


Q ss_pred             HHHHHhhhCCCCCCCCcEEEecChH-----HHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCC
Q 019298           86 IAEYLSRDLPYKLTPNDVFVTSGCT-----QAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWE  160 (343)
Q Consensus        86 ia~~~~~~~~~~~~~~~i~~~~g~~-----~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  160 (343)
                      +++++.++++..+.+++|+++.++.     .++..+++.++++||+|++++|+|+.|...++..|++++.+++.+++++.
T Consensus        80 ia~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~  159 (401)
T d7aata_          80 SAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCS  159 (401)
T ss_dssp             HHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTE
T ss_pred             HHHHHhccCCcccCcCceEEeccchHHHHHHHHHHhhHhhcCCCceEEEecCCCcchhhHHHHcCCeEEEEecccccccc
Confidence            9999988777777888887765433     56778888899999999999999999999999999999999998888888


Q ss_pred             CCHHHHHhhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccc---ccCCC
Q 019298          161 VDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG---VFGST  234 (343)
Q Consensus       161 ~d~~~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~---~~~~~  234 (343)
                      .+.+.+++.+.   ++++++++++||||||.+++.+++++|+++|++|++++|+||+|..+.|++.......   .....
T Consensus       160 ~~~~~~~~~~~~~~~~~~~iii~~p~NPTG~~~s~e~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~  239 (401)
T d7aata_         160 LDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQG  239 (401)
T ss_dssp             ECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTT
T ss_pred             ccHHHHHHHHhcCCCceEEEEecCCCCCccccCCHHHHHHHHHHHhcceEEEEEeccchhhhcCCcccchhhhhhhhhhh
Confidence            99999887764   4678889999999999999999999999999999999999999999999864322211   12334


Q ss_pred             CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh----h-hccccCcchHHHHHHHhccchhhH---HH--
Q 019298          235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK----Y-FDILGDPATFIQVCIMYGCLSTIM---QI--  304 (343)
Q Consensus       235 ~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~----~-~~~~~~~~~~~~~a~~~~~l~~~~---~~--  304 (343)
                      .+++++.|+||.|+++|+|+||++++...     .+...++..    . .....+++...|.++ ..++.+..   ++  
T Consensus       240 ~~~~~~~s~sk~~~~~G~RiG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~  313 (401)
T d7aata_         240 IDVVLSQSYAKNMGLYGERAGAFTVICRD-----AEEAKRVESQLKILIRPMYSNPPMNGARIA-SLILNTPELRKEWLV  313 (401)
T ss_dssp             CCCEEEEECTTTSCCGGGCEEEEEEECSS-----HHHHHHHHHHHHHHHHHHHSSCCHHHHHHH-HHHHHCHHHHHHHHH
T ss_pred             cccceeEeccccceeeccccceeecchHH-----HHHHHHHHHHHHHHhhccccccchHHHHHH-HHhcCCHHHHHHHHH
Confidence            57899999999999999999999997632     111222211    1 223456777878777 55555421   12  


Q ss_pred             -HH-HHHHHHHHHHHHHHhhcCCC---CceeeCCCCceEeeecC
Q 019298          305 -MI-HGNFLENFAGSCVPSYKLIP---ELINFKSTGSSLKYLDL  343 (343)
Q Consensus       305 -l~-~~~~~~~~~~~~~~~L~~~~---g~~~~~~~~g~~~~~~l  343 (343)
                       ++ .+++++++|+.+.+.|+++.   .|.+..|++|||+|+.+
T Consensus       314 ~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~l  357 (401)
T d7aata_         314 EVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGL  357 (401)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCCCcceECCCCeEEEecCC
Confidence             22 77889999999999998862   24556899999999864

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.9e-44  Score=328.09  Aligned_cols=309  Identities=27%  Similarity=0.345  Sum_probs=256.5

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLP   80 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~   80 (343)
                      |++|.|...++++  ....+. .+.+       +.+.|||++|.|+    +++++.+++++++++.+  .++|+++.|.+
T Consensus         1 ~~~~~~~~~~~~~--~~~~~~-~la~-------~~~~I~ls~g~p~----~~~p~~i~~al~~~l~~--~~~Y~~~~G~~   64 (368)
T d1v2da_           1 MRLHPRTEAAKES--IFPRMS-GLAQ-------RLGAVNLGQGFPS----NPPPPFLLEAVRRALGR--QDQYAPPAGLP   64 (368)
T ss_dssp             CCCCGGGGGC-----CHHHHH-HHHH-------HHTCEECCCCSCS----SCCCHHHHHHHHHHTTT--SCSCCCTTCCH
T ss_pred             CCCChhhhhcCCC--HHHHHH-HHhc-------cCCCEEecCCCCC----CCCCHHHHHHHHHHhhc--ccCCCCCcCCH
Confidence            8999999999987  444443 2222       2357999999965    78899999999998864  46899999999


Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCC-CCCC
Q 019298           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP-DKGW  159 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~  159 (343)
                      +||++||+++      ++++++|++|+|+++++..++..++++||.|+++.|+|..+...+...|.+++.++++. .+++
T Consensus        65 elr~aiA~~~------~~~~~~Iiit~G~~~al~~~~~~l~~~~d~v~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~  138 (368)
T d1v2da_          65 ALREALAEEF------AVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGF  138 (368)
T ss_dssp             HHHHHHHHHH------TSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEE
T ss_pred             HHHHHHHhhc------ccCCcceeeccchHHHHHHHhhccccccccccccCCcchhhhhHHHhcCCccceeccccccccc
Confidence            9999999999      57899999999999999999999999999999999999999999999999999888754 3567


Q ss_pred             CCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEE
Q 019298          160 EVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILT  239 (343)
Q Consensus       160 ~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~  239 (343)
                      .+|++.+++.+++.++.+++++||||||.+++.+++++|+++|++||+++|+|++|..+.+........  ....+++++
T Consensus       139 ~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~l~~~a~~~~i~ii~D~~~~~~~~~~~~~~~~--~~~~~~~~~  216 (368)
T d1v2da_         139 RLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLR--EFAPERTFT  216 (368)
T ss_dssp             ECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHH--HHCTTTEEE
T ss_pred             cCCHHHHHHhhccCceEEEEcCCCCcccccCCHHHHHHHHHHHHHcCCeeeechhhhhhcccccccccc--cccccccce
Confidence            899999999999999999999999999999999999999999999999999999999876654433222  233457899


Q ss_pred             EccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchh--hHHHHH-HHHHHHHHH
Q 019298          240 LGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLST--IMQIMI-HGNFLENFA  315 (343)
Q Consensus       240 ~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~--~~~~l~-~~~~~~~~~  315 (343)
                      +.|+||.++++|+|+||+++++        ++++.+.+... ...+++...|.++ ..++..  ..++++ .++.+++++
T Consensus       217 ~~~~sk~~~~~G~R~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~~~  287 (368)
T d1v2da_         217 VGSAGKRLEATGYRVGWIVGPK--------EFMPRLAGMRQWTSFSAPTPLQAGV-AEALKLARREGFYEALREGYRRRR  287 (368)
T ss_dssp             EEEHHHHTTCGGGCCEEEECCT--------TTHHHHHHHHHHHTSSCCHHHHHHH-HHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred             eecccccccccccccccccccc--------cccchhhhhhhcccccccccccccc-ccccccccchhhHHHHHHHHHHhh
Confidence            9999999999999999999864        56776766654 3557778878777 444432  233444 778899999


Q ss_pred             HHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          316 GSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       316 ~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +.+.+.|+++ |+.+..|+||+|+|+++
T Consensus       288 ~~l~~~l~~~-g~~~~~p~g~~~~~~~l  314 (368)
T d1v2da_         288 DLLAGGLRAM-GLRVYVPEGTYFLMAEL  314 (368)
T ss_dssp             HHHHHHHHHT-TCCEECCSBSSEEEEEC
T ss_pred             hhhhhhHHhc-CcEEecCCceeEEEEeC
Confidence            9999999998 89988999999999975

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-43  Score=322.18  Aligned_cols=293  Identities=18%  Similarity=0.264  Sum_probs=239.4

Q ss_pred             eeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHH
Q 019298           37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVA  116 (343)
Q Consensus        37 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~  116 (343)
                      +|+|++|+|+    +++++.+.+++++++.++. .+|++..| +++|+++++++.+++|..+++++|++|+|+++++..+
T Consensus         1 ~~~~~~~~~d----f~~p~~i~eal~~~~~~~~-~~Y~~~~g-~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~~l~~~   74 (361)
T d1d2fa_           1 LLPFTISDMD----FATAPCIIEALNQRLMHGV-FGYSRWKN-DEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSEL   74 (361)
T ss_dssp             CEECCSSSCS----SCCCHHHHHHHHHHHTTCC-CCCCCSCC-HHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHH
T ss_pred             CcCcCCCCCC----CCCCHHHHHHHHHHHhCCC-CCCCCCCC-HHHHHHHHHHHHHHhCCCCCcceEEEeCCHHHHHHHH
Confidence            4899999975    8999999999999987764 47998877 7899999999999999999999999999999999999


Q ss_pred             HHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCC-CCCCCCHHHHHhhhcC-CceEEEEeCCCCCcccccCHHH
Q 019298          117 MALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPD-KGWEVDLDDIESLADQ-NTVALVIINPGNPCGNVYSYQH  194 (343)
Q Consensus       117 ~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~  194 (343)
                      +.+++++||+|++++|+|..|...++..|..++.++.... +++.+|++.+++.+.. +++++++++||||||.+++.++
T Consensus        75 ~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~~~~~~~~~~~~~i~l~~p~NPTG~~~s~~~  154 (361)
T d1d2fa_          75 IRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDE  154 (361)
T ss_dssp             HHHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTH
T ss_pred             hhhccccccccccccccccchhHHHHhhcceEEeecccccccccccccccchhhcccCCceeEEecccccccccccchhh
Confidence            9999999999999999999999999999999998887653 5567999999998854 7889999999999999999999


Q ss_pred             HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHH
Q 019298          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVER  274 (343)
Q Consensus       195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~  274 (343)
                      +++|+++|+++++++|+||+|.++.+++....++.... .++++++.|+||.|+++|+|+||++++++      ....+.
T Consensus       155 ~~~i~~~~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~-~~~~v~~~s~SK~~~~~g~R~g~~~~~~~------~~~~~~  227 (361)
T d1d2fa_         155 LEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVA-RGDWALLTSGSKSFNIPALTGAYGIIENS------SSRDAY  227 (361)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTC-CSSEEEEECSHHHHTCGGGCCEEEEECSH------HHHHHH
T ss_pred             hhhhhhhhhhhheeeeeccccccccccccccccccccc-ccccccccccccccccccccceeeecchh------HHHHHH
Confidence            99999999999999999999999999876655554443 35889999999999999999999988642      122333


Q ss_pred             Hhhhhcc--ccCcchHHHHHHHhccchhhHHHHH-HHHHHHHHHHHHHHhhcC-CCCceeeCCCCceEeeecC
Q 019298          275 MKKYFDI--LGDPATFIQVCIMYGCLSTIMQIMI-HGNFLENFAGSCVPSYKL-IPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       275 l~~~~~~--~~~~~~~~~~a~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~L~~-~~g~~~~~~~~g~~~~~~l  343 (343)
                      +......  ...++...+.+. ...+....++.+ .+..++++++.+.+.+.. ++++.+..|+||+|+|+++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~a~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~p~gg~~~~~~l  299 (361)
T d1d2fa_         228 LSALKGRDGLSSPSVLALTAH-IAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDL  299 (361)
T ss_dssp             HHHHHTTSCCCSCCHHHHHHH-HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEEC
T ss_pred             hhhcccccccccchhhhHHHH-HHHhhccchhhhcccccchhhHHHHHHHhhhhcccccccccCceeEEEEEc
Confidence            3333322  223333444433 333443345554 777788888888777655 5678888999999999875

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

Probab=100.00  E-value=1.8e-44  Score=332.16  Aligned_cols=320  Identities=21%  Similarity=0.285  Sum_probs=256.2

Q ss_pred             cccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCC
Q 019298            2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGL   79 (343)
Q Consensus         2 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~   79 (343)
                      .+|+++.++++|  .|+.++...        +++++|||+.|.|+.  ...+.+.++++++++++..  ...+|++..|.
T Consensus         6 ~~~~~~~~~~~s--~ire~~~~~--------~~~~~i~l~~G~P~~--~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~   73 (403)
T d1wsta1           6 FFSEKAMLMKAS--EVRELLKLV--------ETSDVISLAGGLPAP--ETFPVETIKKIAVEVLEEHADKALQYGTTKGF   73 (403)
T ss_dssp             GCCHHHHHCCCH--HHHHHHHHH--------TSSSCEECCCCCCCG--GGSCHHHHHHHHHHHHHHSHHHHHSCCCSSCC
T ss_pred             HHHHHHhcCCCc--HHHHHHHHh--------CCCCcEECCCCCCCc--cccCHHHHHHHHHHHHHhCcccccCCCCCcCC
Confidence            378888889887  787775521        156799999999873  2345678888888877543  34579999999


Q ss_pred             HHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC
Q 019298           80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW  159 (343)
Q Consensus        80 ~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  159 (343)
                      ++||+++|+|+++++|..+++++|++|+|+++++..++.+++++||.|++++|+|..+...+...|.+++.++.+.+..+
T Consensus        74 ~~lR~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~  153 (403)
T d1wsta1          74 TPLRLALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQAFKYYDPEFISIPLDDKGMR  153 (403)
T ss_dssp             HHHHHHHHHHHHHHHCCCCTTCEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTEEC
T ss_pred             HHHHHHHHHHHHHHhCCCCChHHeeecccchHHHHHHHHHHhhcCCccccCCCcchhhhHHHhhccccceeEeecccCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999988654332


Q ss_pred             CCCHHHHH-hhh---cCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCC
Q 019298          160 EVDLDDIE-SLA---DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV  235 (343)
Q Consensus       160 ~~d~~~l~-~~~---~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~  235 (343)
                      ..+..... ...   +....++++++||||||.+++.+++++|+++|++||+++|+||+|.++.+++....++...+..+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~l~~i~~~a~~~~~~li~De~y~~l~~~~~~~~~~~~~~~~~  233 (403)
T d1wsta1         154 VDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYG  233 (403)
T ss_dssp             HHHHHHHHHHHHHTTCCCCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGGCSSS
T ss_pred             cccccccchhhhhccccccccccccccCCCCCccCCHHHHHHHHHHHHhcCceeccccchhheecCCCCCCcccccCCCC
Confidence            22222222 111   22445677789999999999999999999999999999999999999999988777777777778


Q ss_pred             CEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccch--hhHHHHH-HHHHH
Q 019298          236 PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLS--TIMQIMI-HGNFL  311 (343)
Q Consensus       236 ~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~--~~~~~l~-~~~~~  311 (343)
                      ++++++|+||.++ +|+|+||++++        +++++.+..... ...+++...|.+. .+++.  ....+++ .++.+
T Consensus       234 ~~i~~~S~SK~~~-~G~RiG~~i~~--------~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  303 (403)
T d1wsta1         234 RVIYLGTFSKILA-PGFRIGWVAAH--------PHLIRKMEIAKQSIDLCTNTFGQAIA-WKYVENGYLDEHIPKIIEFY  303 (403)
T ss_dssp             CEEEEEESTTTTC-GGGCCEEEEEC--------HHHHHHHHHHHHHHHSSCCHHHHHHH-HHHHHTTHHHHHHHHHHHHH
T ss_pred             cEEEEccccceec-Ccccccccccc--------hHHHHHHHHHHhhhccccccchhhhH-HhhhhccccchhHHHHHHHH
Confidence            9999999999984 99999999995        368887776643 2456677666665 33332  2233444 78888


Q ss_pred             HHHHHHHHHhhcCC--CCceeeCCCCceEeeecC
Q 019298          312 ENFAGSCVPSYKLI--PELINFKSTGSSLKYLDL  343 (343)
Q Consensus       312 ~~~~~~~~~~L~~~--~g~~~~~~~~g~~~~~~l  343 (343)
                      +++++.+.+.|.+.  .|+.+..|+||+|+|+++
T Consensus       304 ~~~~~~~~~~L~~~~~~~~~~~~p~gg~~~~~~~  337 (403)
T d1wsta1         304 KPRRDAMLEALEEYMPEGVEWTKPEGGMFVRVTL  337 (403)
T ss_dssp             HHHHHHHHHHHHHHCCTTCEECCCSBSSEEEEEC
T ss_pred             HHHHHHHHHHHHhhccCCeEEeCCCceeEEEEEC
Confidence            88899988888763  467788999999999975

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.4e-44  Score=332.02  Aligned_cols=317  Identities=21%  Similarity=0.253  Sum_probs=254.0

Q ss_pred             cccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCC
Q 019298            2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSE--KFNGYAPTAGL   79 (343)
Q Consensus         2 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~   79 (343)
                      .+|+++..++++  .+++++..        ..++++|||+.|.|+.  ...+.+.+.++++++++..  ...+|+++.|.
T Consensus        15 ~~s~~~~~~~~s--~ir~~~~~--------~~~~~~I~l~~G~Pd~--~~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~   82 (420)
T d1vp4a_          15 KISKIGQNMKSS--IIREILKF--------AADKDAISFGGGVPDP--ETFPRKELAEIAKEIIEKEYHYTLQYSTTEGD   82 (420)
T ss_dssp             HCCHHHHTCCCC--CHHHHTTT--------TTSTTCEECCCCSCCG--GGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCC
T ss_pred             HHhHHHHhCCCc--HHHHHHHH--------hCCCCcEecCCcCCCC--ccCCHHHHHHHHHHHHhhCCccccCCCCCcCC
Confidence            378899999988  78887542        1267899999999872  2345677888888877643  34689999999


Q ss_pred             HHHHHHHHHHHhhhCCCC-CCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCC
Q 019298           80 PLTRRAIAEYLSRDLPYK-LTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG  158 (343)
Q Consensus        80 ~~lr~~ia~~~~~~~~~~-~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  158 (343)
                      ++||++||+++++++|.. +++++|++|+|+++++..++.+++++||.|++++|+|..|...++..|.+++.++.+++  
T Consensus        83 ~~LR~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~--  160 (420)
T d1vp4a_          83 PVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD--  160 (420)
T ss_dssp             HHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT--
T ss_pred             HHHHHHHHHHHHHHhCCCCCCHHHeEeccchhhhHHHHHHhhhccccccccccccccchhHHHHHHhhhccccccccc--
Confidence            999999999999988876 79999999999999999999999999999999999999999999999999999987543  


Q ss_pred             CCCCHHHHHhhhc---------CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccc
Q 019298          159 WEVDLDDIESLAD---------QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG  229 (343)
Q Consensus       159 ~~~d~~~l~~~~~---------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~  229 (343)
                       +++++.++..+.         ..+.++++++||||||.+++.+++++|+++|++|++++|+||+|.++.|++....+..
T Consensus       161 -~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~NPtG~~~s~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~  239 (420)
T d1vp4a_         161 -GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIF  239 (420)
T ss_dssp             -EECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHH
T ss_pred             -ccccchhhhhhhhhHHHhhccccceeeEecCCCCccchhhhhhhhhhhhhhhhcccccccccchhhhccccCccccccc
Confidence             467777655332         1233556789999999999999999999999999999999999999999877666555


Q ss_pred             ccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhh--HHHHH
Q 019298          230 VFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTI--MQIMI  306 (343)
Q Consensus       230 ~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~--~~~l~  306 (343)
                      .....+++++++|+||.+ ++|+|+||++++        +++++++.+.... ..+++...|.++ ..++...  .++++
T Consensus       240 ~~~~~~~~i~~~s~sk~~-~~G~RiG~~~~~--------~~~i~~l~~~~~~~~~~~~~~~q~~~-a~~l~~~~~~~~~~  309 (420)
T d1vp4a_         240 KIGGPERVVLLNTFSKVL-APGLRIGMVAGS--------KEFIRKIVQAKQSADLCSPAITHRLA-ARYLERYDLLEQLK  309 (420)
T ss_dssp             HHHCTTTEEEEEESTTTT-CGGGCEEEEECC--------HHHHHHHHHHHHHHHSSCCHHHHHHH-HHHHHHSCHHHHTH
T ss_pred             ccccccceeEEecccccc-cccccccccccc--------chhhhhhhhhhhhccccCchhhhhhh-hhhcccccccccch
Confidence            555667899999999985 699999999985        4788888777543 456777777777 4444321  22222


Q ss_pred             -HHHHHHHHHHHHHHhhc----CCCCceeeCCCCceEeeecC
Q 019298          307 -HGNFLENFAGSCVPSYK----LIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       307 -~~~~~~~~~~~~~~~L~----~~~g~~~~~~~~g~~~~~~l  343 (343)
                       .++.++++++.+.+.|.    .+||+.+..|+||+|+|+++
T Consensus       310 ~~~~~~~~~~~~~~~~L~~~~~~~~g~~~~~p~gg~f~~~~~  351 (420)
T d1vp4a_         310 PTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTL  351 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEEC
T ss_pred             hHHHHhhhhcccchhhhhhhhccCCCcEEecCCceEEEEEEC
Confidence             56666776666666554    56789988999999999975

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

Probab=100.00  E-value=1.9e-42  Score=319.18  Aligned_cols=333  Identities=12%  Similarity=0.097  Sum_probs=251.3

Q ss_pred             cccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCC-CCCCCCCCcHHHHHHHHHHHhc-CCCCCCCCCCCC
Q 019298            2 EISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEALLS-EKFNGYAPTAGL   79 (343)
Q Consensus         2 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~g~   79 (343)
                      .+..+...+|++  +|+.+...+.++.     .+++|||++|.. +.....+..+.++++.+....+ ...++|+|..|.
T Consensus         3 ~~~~~~~~~~~d--~i~~~~~~~~~d~-----~~~kInL~iG~~~d~~g~~~~~~~V~~A~~~l~~~~~~~~~Y~p~~G~   75 (412)
T d1yaaa_           3 TLFNNIELLPPD--ALFGIKQRYGQDQ-----RATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGL   75 (412)
T ss_dssp             TTTTTCCCCCCC--TTHHHHHHHHTCC-----CSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCC
T ss_pred             ChhhcCCcCCCC--hHHHHHHHHhcCC-----CCCcEEeecCCCcCCCCCCCCcHHHHHHHHHHHhCcccCCCCCCCCCC
Confidence            356778888988  8899998888876     556799999952 2112345668888886665543 345689999999


Q ss_pred             HHHHHHHHHHHhhhCCCCCCCCcEEE--ecChHHHHHHHH--HHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCC
Q 019298           80 PLTRRAIAEYLSRDLPYKLTPNDVFV--TSGCTQAIDVAM--ALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP  155 (343)
Q Consensus        80 ~~lr~~ia~~~~~~~~~~~~~~~i~~--~~g~~~al~~~~--~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~  155 (343)
                      ++||+++++++.+.++.....+.+++  +.|+..++..++  ..+..+||.|++++|+|+.|...+...|.+++.+++..
T Consensus        76 ~~lr~aia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~Vlip~P~~~~y~~~~~~~g~~~~~~~~~~  155 (412)
T d1yaaa_          76 PSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWA  155 (412)
T ss_dssp             HHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEE
T ss_pred             HHHHHHHHHHHhcccCccccccceeEEecccchhHHHHHHHHHhccCCCCEEecccccCchhHHHHHHcCCceecccccc
Confidence            99999999999876665455555443  344444444443  33467999999999999999999999999999999988


Q ss_pred             CCCCCCCHHHHHhhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcc----
Q 019298          156 DKGWEVDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM----  228 (343)
Q Consensus       156 ~~~~~~d~~~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~----  228 (343)
                      ++++.++.+.+++.+.   +.+.++++++||||||.+++.+++++|+++|+++++++|+||+|.++.|++....+.    
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~i~i~~P~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~  235 (412)
T d1yaaa_         156 NETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRL  235 (412)
T ss_dssp             TTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHH
T ss_pred             cccccccchhhhcccccCCCceEEEEecCCCCCccccCCHHHHHHHHhhhccCCEEEeecceeeecccCCcccchhhhhh
Confidence            8888899888887664   355688899999999999999999999999999999999999999999987432221    


Q ss_pred             --cccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHh----hh-hccccCcchHHHHHHHhccchhh
Q 019298          229 --GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK----KY-FDILGDPATFIQVCIMYGCLSTI  301 (343)
Q Consensus       229 --~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~----~~-~~~~~~~~~~~~~a~~~~~l~~~  301 (343)
                        ......++++++.|+||.|+++|+|+||++++++.... .....+.+.    .. .....+++.+.|.++ ..++.+.
T Consensus       236 ~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~  313 (412)
T d1yaaa_         236 GVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQ-NKTIKPAVTSQLAKIIRSEVSNPPAYGAKIV-AKLLETP  313 (412)
T ss_dssp             HHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTT-HHHHHHHHHHHHHHHHHTTTSSCCHHHHHHH-HHHHHSH
T ss_pred             hhhccccCCCeEEEEecCCccccCcCceEEEEEchhhhhh-HHHHHHHHHHHHHHHHHHHhcCCChHHHHHH-HHHhcCh
Confidence              12345568999999999999999999999998643211 111222221    11 234668888889888 6666543


Q ss_pred             H---HHH---H-HHHHHHHHHHHHHHhhcCC--CC-ceeeCCCCceEeeecC
Q 019298          302 M---QIM---I-HGNFLENFAGSCVPSYKLI--PE-LINFKSTGSSLKYLDL  343 (343)
Q Consensus       302 ~---~~l---~-~~~~~~~~~~~~~~~L~~~--~g-~~~~~~~~g~~~~~~l  343 (343)
                      .   ++.   + .+++++++|+.+.+.|+.+  ++ |.+..|+||||+|+.+
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~~~~gG~F~~~~l  365 (412)
T d1yaaa_         314 ELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGL  365 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceeCCCceEEEecCc
Confidence            2   222   2 7888999999999999875  22 5567899999999864

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.9e-43  Score=324.59  Aligned_cols=330  Identities=15%  Similarity=0.114  Sum_probs=250.8

Q ss_pred             CccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCC-CCCCCCcHHHHHHHHHHHhc-CCCCCCCCCCCCHHH
Q 019298            5 NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTV-HSCFHTTHVATEAVAEALLS-EKFNGYAPTAGLPLT   82 (343)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~g~~~l   82 (343)
                      .+....|.+  +|..++..++++.     .+++|||++|.+.. ....+..+.++++.+....+ ...+.|+|..|.++|
T Consensus         3 ~~~~~~~~d--pi~~~~~~~~~d~-----~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~l~~~~~~~~~Y~p~~G~~~l   75 (397)
T d3tata_           3 QKVDAYAGD--PILTLMERFKEDP-----RSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCY   75 (397)
T ss_dssp             CCCCCCCCC--TTTTHHHHHHHSC-----CSSCEECSCCSCCCTTSSCCCCHHHHHHHHHHTTSCCSSBCCCCTTCCHHH
T ss_pred             ccCCCCCCC--cHHHHHHHHhcCC-----CCCcEEccCCCCcCCCCCCCCcHHHHHHHHHHHhCcccCCCCCCcccCHHH
Confidence            344556666  8888988888766     45679999996321 13345678899887765433 245679999999999


Q ss_pred             HHHHHHHHhhhCCCCCCCCcEEEecChHHH----HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCC
Q 019298           83 RRAIAEYLSRDLPYKLTPNDVFVTSGCTQA----IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKG  158 (343)
Q Consensus        83 r~~ia~~~~~~~~~~~~~~~i~~~~g~~~a----l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~  158 (343)
                      |+++++++.++++..+++++|+++.|++.+    +..++..+..+||.|++++|+|+.|...++..|.+++.+++..+++
T Consensus        76 R~aia~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~v~~~~~~~  155 (397)
T d3tata_          76 RHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEAT  155 (397)
T ss_dssp             HHHHHHHHTCSSCHHHHTTCEEECCBSHHHHHHHHHHHHHHHHCSSCCCEECSSCCTTHHHHHHTTTCCCEECCCCCTTT
T ss_pred             HHHHHHHHhhccCCcCCcCcEEEecCchhHHHHHHHHHHhhhcCCCCcceecccCccccHHHHHHcCCEEEEEecchhhc
Confidence            999999999888877888999888776654    5566666779999999999999999999999999999999988888


Q ss_pred             CCCCHHHHHhhhc---CCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCccc--ccCC
Q 019298          159 WEVDLDDIESLAD---QNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMG--VFGS  233 (343)
Q Consensus       159 ~~~d~~~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~--~~~~  233 (343)
                      +..|.+.+.+...   ++++++++++||||||.+++.+++++|+++|+++++++|+||+|.++.|++....+..  ....
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~  235 (397)
T d3tata_         156 NGVRFNDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASA  235 (397)
T ss_dssp             SSCCHHHHHHHHTTCCSSCCCEECSSSCSSSCCCCCHHHHHHHHHHHHHTTCCCEECBSCTTSSSCHHHHHHHHHHHHTT
T ss_pred             cccchHHHHHHhhhcccccEEEEecCCCCCCCeeCCHHHHHHHHHHHhhcCeeEEeehhhhhhccCCcccchhhhhhhhc
Confidence            8899888887654   4667888999999999999999999999999999999999999999998754322221  1234


Q ss_pred             CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhH---HHHH---
Q 019298          234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIM---QIMI---  306 (343)
Q Consensus       234 ~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~---~~l~---  306 (343)
                      ..+++++.|+||+|+++|+|+||++++...... -..+...+... .....+++...|.++ ..++.+..   ++.+   
T Consensus       236 ~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~q~~~-~~~~~~~~~~~~~~~~~~  313 (397)
T d3tata_         236 GLPALVSNSFSKIFSLYGERVGGLSVMCEDAEA-AGRVLGQLKATVRRNYSSPPNFGAQVV-AAVLNDEALKASWLAEVE  313 (397)
T ss_dssp             TCCCEECBCCHHHHTBTTTCCBCCEEECSSTTH-HHHHHHHHHHHTTTTTSSCCSHHHHHH-HHHHHSHHHHHHHHHHHH
T ss_pred             CCceEEEecCcccccccCccccccccchhHHHH-HHHHHHHHHHHhhcccccccHHHHHHH-HHhcCCHHHHHHHHHHHH
Confidence            457899999999999999999999987643110 00111112212 233556777778777 45554322   2222   


Q ss_pred             -HHHHHHHHHHHHHHhhcCC-CC--ceeeCCCCceEeeecC
Q 019298          307 -HGNFLENFAGSCVPSYKLI-PE--LINFKSTGSSLKYLDL  343 (343)
Q Consensus       307 -~~~~~~~~~~~~~~~L~~~-~g--~~~~~~~~g~~~~~~l  343 (343)
                       .+++++++++.+.+.|..+ ++  |.+..+++|+|+|+.+
T Consensus       314 ~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~l  354 (397)
T d3tata_         314 EMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGL  354 (397)
T ss_dssp             HHHHHHHHHHHHHHHTTTTTCTTSCTTHHHHCCSSBCCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCceEEEcCCCceEEecCc
Confidence             6777888899999998875 22  5566899999999875

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-42  Score=319.39  Aligned_cols=326  Identities=16%  Similarity=0.111  Sum_probs=236.1

Q ss_pred             CccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCC-CCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHH
Q 019298            5 NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTV-HSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR   83 (343)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr   83 (343)
                      ++..+.|++  +|+.+...++.+.     ++++|||++|.+.. ....+.++.+++++++..++...++|+|..|.++||
T Consensus         3 ~~~~~~p~d--~i~~~~~~~~~d~-----~~~kInL~iG~~~d~~g~~p~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lR   75 (396)
T d2q7wa1           3 ENITAAPAD--PILGLADLFRADE-----RPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFG   75 (396)
T ss_dssp             TTCCCCCC------------------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHH
T ss_pred             cccccCCCC--hHHHHHHHHhccC-----CCCcEEeeCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCcCCHHHH
Confidence            566778877  8889888777655     55679999995321 133567789999999888877777899999999999


Q ss_pred             HHHHHHHhhhCCCCCCCCcE--EEecChHHHHHHHHHH--hcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCC
Q 019298           84 RAIAEYLSRDLPYKLTPNDV--FVTSGCTQAIDVAMAL--LSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGW  159 (343)
Q Consensus        84 ~~ia~~~~~~~~~~~~~~~i--~~~~g~~~al~~~~~~--l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~  159 (343)
                      +++++++.++++....++.+  +++.|++.++..++..  ...+||.|++++|+|+.|...++..|++++.+++..++++
T Consensus        76 ~aia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~gd~Vlvp~P~y~~y~~~~~~~g~~~~~~~~~~~~~~  155 (396)
T d2q7wa1          76 RCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH  155 (396)
T ss_dssp             HHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTT
T ss_pred             HHHHHHHHhhcCCcccccceeeeccchHHHHHHHHHHHHhhcccceEEEEecCCCccchHHHHHcCCeeEeccccccccc
Confidence            99999998877766656554  4566666666555443  4689999999999999999999999999999999888887


Q ss_pred             CCCHHHHHhhh---cCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccc--cCCC
Q 019298          160 EVDLDDIESLA---DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV--FGST  234 (343)
Q Consensus       160 ~~d~~~l~~~~---~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~--~~~~  234 (343)
                      ..+.+.+++..   .++++++++++||||||.+++.+++++|+++|++|++++|+||+|.++.+++........  ....
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~i~~~~P~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~  235 (396)
T d2q7wa1         156 TLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMH  235 (396)
T ss_dssp             EECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHC
T ss_pred             ccccchHHHHHHHhccCcEEEEecCCcCCcCeecCHHHHHHHHHHHhcCCeEEEEeccccccccCCccCchHhhhhhhhc
Confidence            77877776654   346778889999999999999999999999999999999999999999988643322211  1234


Q ss_pred             CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-----hccccCcchHHHHHHHhccchhhH------H
Q 019298          235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-----FDILGDPATFIQVCIMYGCLSTIM------Q  303 (343)
Q Consensus       235 ~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~~~l~~~~------~  303 (343)
                      ++++++.|+||.|+++|+|+||++++...     .+........     .....+++...|.++ ..++.+..      +
T Consensus       236 ~~~~~~~s~sk~~~~~G~R~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~-~~~~~~~~~~~~~~~  309 (396)
T d2q7wa1         236 KELIVASSYSKNFGLYNERVGACTLVAAD-----SETVDRAFSQMKAAIRANYSNPPAHGASVV-ATILSNDALRAIWEQ  309 (396)
T ss_dssp             SCEEEEEECTTTTTCGGGCCEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCHHHHHHH-HHHHTSHHHHHHHHH
T ss_pred             ccccccccccccccccCCCccccccchhH-----HHHHHHhhhhhhhhhhccccCCCHHHHHHH-HHHhcCchhHHHHHH
Confidence            57899999999999999999999997632     1122222211     233456777777777 55555421      2


Q ss_pred             HHH-HHHHHHHHHHHHHHhhcCCC---CceeeCCCCceEeeecC
Q 019298          304 IMI-HGNFLENFAGSCVPSYKLIP---ELINFKSTGSSLKYLDL  343 (343)
Q Consensus       304 ~l~-~~~~~~~~~~~~~~~L~~~~---g~~~~~~~~g~~~~~~l  343 (343)
                      +++ .+++++++|+.+.+.|+++.   .|.+..+++|+|.|+.+
T Consensus       310 ~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~l  353 (396)
T d2q7wa1         310 ELTDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGL  353 (396)
T ss_dssp             HHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCCCcceecCCCeEEEeeCC
Confidence            222 77889999999999998862   14556889999999865

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

Probab=100.00  E-value=4.2e-42  Score=317.00  Aligned_cols=330  Identities=12%  Similarity=0.063  Sum_probs=246.6

Q ss_pred             CcccCccccCcCccccHHHHHHHHHhhccccccccceeEeccCCC-CCCCCCCCcHHHHHHHHHHHhcC-CCCCCCCCCC
Q 019298            1 MEISNGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDP-TVHSCFHTTHVATEAVAEALLSE-KFNGYAPTAG   78 (343)
Q Consensus         1 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~~~g   78 (343)
                      |.+..+..+.+|+  +++.++..++++.     .+++|||++|.. +.....+..|.++++.+....+. ..++|+|..|
T Consensus         3 ~s~~~~~~~~~~~--~i~~l~~~~~~d~-----~~~~Inl~iG~~~d~~g~~~~~~~V~~a~~~~~~~~~~~~~Y~p~~G   75 (412)
T d1ajsa_           3 PSVFAEVPQAQPV--LVFKLIADFREDP-----DPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILG   75 (412)
T ss_dssp             CCTTTTCCCCCCC--HHHHHHHHHHTCC-----CTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTC
T ss_pred             cChhhhCCcCCCC--hHHHHHHHHhcCC-----CCCcEEeeCCCCcCCCCCCCCcHHHHHHHHHHHhCCCcCCCCCCCCC
Confidence            4556677788877  8999999888765     567799999942 21233567788988877765543 4568999999


Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEE--EecChHHHHHHHHHHh-------cCCCCeEEEeCCCCcchHHHHHhcCceeE
Q 019298           79 LPLTRRAIAEYLSRDLPYKLTPNDVF--VTSGCTQAIDVAMALL-------SRPGANILLPRPGFPIYELSAAFRHIEVR  149 (343)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i~--~~~g~~~al~~~~~~l-------~~~gd~vl~~~p~~~~~~~~~~~~g~~~~  149 (343)
                      .++||+++++++.+.++..+..++++  .|.|++.++..+...+       .+|||+|++++|+|+.|...++..|++.+
T Consensus        76 ~p~lreaia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~G~~~v  155 (412)
T d1ajsa_          76 LAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDI  155 (412)
T ss_dssp             CHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCE
T ss_pred             CHHHHHHHHHHHhccCCcccccccceeecccchhhHHHHHHHHHHHHhhhcCCCCCEEEEeCCcchhhHHHHHHcCCeEE
Confidence            99999999999988777666777654  4555555555544443       68999999999999999999999998866


Q ss_pred             Eee-cCCCCCCCCCHHHHHhhh---cCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCC
Q 019298          150 HFD-LLPDKGWEVDLDDIESLA---DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPF  225 (343)
Q Consensus       150 ~~~-~~~~~~~~~d~~~l~~~~---~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~  225 (343)
                      .++ ...++.+..|++.+++..   .++++++++|+||||||.+++.+++++|+++|++||+++|+||+|..+.|++...
T Consensus       156 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~il~~~P~NPTG~v~s~e~~~~i~~la~~~~~~ii~De~Y~~l~~~~~~~  235 (412)
T d1ajsa_         156 RSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEK  235 (412)
T ss_dssp             EEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHH
T ss_pred             EeecccccccccccHHHHHHHHHhccCCcEEEEecCCCCCcCCCCCHHHHHHHHHHHhhCCEEEEecHhhhhhhcCCccc
Confidence            544 444566678888877654   4577888999999999999999999999999999999999999999999887432


Q ss_pred             Cc---ccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHh----hh-hccccCcchHHHHHHHhcc
Q 019298          226 VP---MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK----KY-FDILGDPATFIQVCIMYGC  297 (343)
Q Consensus       226 ~~---~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~----~~-~~~~~~~~~~~~~a~~~~~  297 (343)
                      ..   .......++++++.|+||.|+++|+|+||++++...     .+...++.    .. .....+++.+.|.++ ..+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  309 (412)
T d1ajsa_         236 DAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKE-----PDSILRVLSQMQKIVRVTWSNPPAQGARIV-ART  309 (412)
T ss_dssp             HTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCSHHHHHH-HHH
T ss_pred             chhhhhhhhhhcccccccccccccccCCCCCccccccchhH-----HHHHHHHHHHHHHHhhccccccchHHHHHH-HHH
Confidence            22   112234457899999999999999999999997532     11222221    11 223557777888777 555


Q ss_pred             chhhH---HHHH----HHHHHHHHHHHHHHhhcCCC--C-ceeeCCCCceEeeecC
Q 019298          298 LSTIM---QIMI----HGNFLENFAGSCVPSYKLIP--E-LINFKSTGSSLKYLDL  343 (343)
Q Consensus       298 l~~~~---~~l~----~~~~~~~~~~~~~~~L~~~~--g-~~~~~~~~g~~~~~~l  343 (343)
                      +.+..   ++.+    .+++++++|+.+.+.|+.++  + |.+..+++|+|.|+.+
T Consensus       310 ~~~~~~~~~~~~~~~~~~~~l~~~r~~l~~~L~~~~~~~~~~~i~~~~G~F~~~~l  365 (412)
T d1ajsa_         310 LSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGL  365 (412)
T ss_dssp             HHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCC
T ss_pred             hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeeeecCCCeEEEecCC
Confidence            54321   1222    78889999999999998762  2 4456889999999864

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

Probab=100.00  E-value=5.3e-42  Score=314.65  Aligned_cols=326  Identities=14%  Similarity=0.099  Sum_probs=245.2

Q ss_pred             CccccCcCccccHHHHHHHHHhhccccccccceeEeccCCCCC-CCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHH
Q 019298            5 NGGIDNTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTV-HSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTR   83 (343)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr   83 (343)
                      +..+..+++  +|+.++..++++.     .+++|||++|.+.. ....++++.+++++++..++...++|+|..|.++||
T Consensus         3 ~~~~~~~~d--~i~~l~~~~~~d~-----~~~~InL~iG~~~d~~g~~~~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lr   75 (394)
T d2ay1a_           3 GNLKPQAPD--KILALMGEFRADP-----RQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQ   75 (394)
T ss_dssp             GGCCCCCCC--SHHHHHHHHHHCC-----CTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHH
T ss_pred             CCCCCCCCC--hHHHHHHHHhCCC-----CCCCEEccCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHH
Confidence            345566766  8999999888765     56789999996321 133556799999999988776667899999999999


Q ss_pred             HHHHHHHhhhCCCCCCCCcEEEecCh-HHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCC
Q 019298           84 RAIAEYLSRDLPYKLTPNDVFVTSGC-TQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVD  162 (343)
Q Consensus        84 ~~ia~~~~~~~~~~~~~~~i~~~~g~-~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d  162 (343)
                      +++++++.+..+.....+.+++++|+ ..++...+..+.++||.|++++|+|+.|...++..|.+++.+++..++++..+
T Consensus        76 ~aia~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~gd~V~~p~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~  155 (394)
T d2ay1a_          76 KAMGELILGDGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVD  155 (394)
T ss_dssp             HHHHHHHHGGGCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEEC
T ss_pred             HHHHHHHhccccccccccceeccCchHHHHHHHHHhhhcCCceEEEEecccccchHHHHHHcCCEEEEecccchhccccc
Confidence            99999998765544444455544443 44466666667799999999999999999999999999999998877777777


Q ss_pred             HHHHHhhh---cCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccc--cCCCCCE
Q 019298          163 LDDIESLA---DQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGV--FGSTVPI  237 (343)
Q Consensus       163 ~~~l~~~~---~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~--~~~~~~~  237 (343)
                      .+.+++..   .++++++++++||||||.+++.+++++|+++|++|++++|+||+|.++.|++....+...  .....++
T Consensus       156 ~~~~~~~~~~~~~~~~i~~~~~p~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~  235 (394)
T d2ay1a_         156 FEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEV  235 (394)
T ss_dssp             HHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSE
T ss_pred             chhHHHHHhhcccCcEEEEeCCCCCCCCCCCCHHHHHHHHHHhhcceEEEEEeccchhhcccccccchhhhhhhhhcccc
Confidence            77776654   345677788899999999999999999999999999999999999999988653322221  1233578


Q ss_pred             EEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHH----hhh-hccccCcchHHHHHHHhccchhh---HHHHH---
Q 019298          238 LTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM----KKY-FDILGDPATFIQVCIMYGCLSTI---MQIMI---  306 (343)
Q Consensus       238 i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l----~~~-~~~~~~~~~~~~~a~~~~~l~~~---~~~l~---  306 (343)
                      +++.|+||.|+++|+|+||++++...     .+....+    ... .....+++...|.++ ..++.+.   .+|.+   
T Consensus       236 ~~~~s~sk~~~~~G~R~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~  309 (394)
T d2ay1a_         236 LIAASCSKNFGIYRERTGCLLALCAD-----AATRELAQGAMAFLNRQTYSFPPFHGAKIV-STVLTTPELRADWMAELE  309 (394)
T ss_dssp             EEEEECTTTTTCGGGCEEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCCHHHHHH-HHHHHSHHHHHHHHHHHH
T ss_pred             cccccccccccCCcccccchhhchhH-----HHHHHHhhhhhHhhhcccccchhHHHHHHH-HHhcCCHHHHHHHHHHHH
Confidence            99999999999999999999997632     1111111    111 223456666767666 4444432   12222   


Q ss_pred             -HHHHHHHHHHHHHHhhcCCC---CceeeCCCCceEeeecC
Q 019298          307 -HGNFLENFAGSCVPSYKLIP---ELINFKSTGSSLKYLDL  343 (343)
Q Consensus       307 -~~~~~~~~~~~~~~~L~~~~---g~~~~~~~~g~~~~~~l  343 (343)
                       ++++++++|+.+.+.|++++   .|.+..|++|+|+|+++
T Consensus       310 ~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~l  350 (394)
T d2ay1a_         310 AVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGA  350 (394)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSSEEECCC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCceeeECCCceeEEecCc
Confidence             78889999999999998752   25566899999999875

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

Probab=100.00  E-value=1.6e-40  Score=300.60  Aligned_cols=282  Identities=20%  Similarity=0.269  Sum_probs=235.1

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      +.++|||+.|.    +.+++++.+++++.+....  .+.|++ .+..+||+++|+++      ++++++|++++|+++++
T Consensus        21 p~~~idls~~~----np~~~p~~~~~a~~~~~~~--~~~Yp~-~~~~~Lr~aia~~~------~v~~~~I~~~~g~~~~~   87 (355)
T d1lc5a_          21 PDQLLDFSANI----NPLGMPVSVKRALIDNLDC--IERYPD-ADYFHLHQALARHH------QVPASWILAGNGETESI   87 (355)
T ss_dssp             GGGSEECSSCC----CTTCCCHHHHHHHHHTGGG--GGSCCC-TTCHHHHHHHHHHH------TSCGGGEEEESSHHHHH
T ss_pred             hhheEEccCCC----CCCCCCHHHHHHHHHHHHH--hccCCC-CChHHHHHHHHHHh------CCCHHHEEecccHHHHH
Confidence            55799999997    4477899999999987654  567965 56799999999999      57899999999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHH
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQ  193 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~  193 (343)
                      ..++..+.  ++.+++..|+|..|.......+.++..+++..++++.++ +.+++.+..+++++++++||||||.+++.+
T Consensus        88 ~~~~~~~~--~~~~~v~~p~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~v~l~nP~NPtG~~~~~e  164 (355)
T d1lc5a_          88 FTVASGLK--PRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPERP  164 (355)
T ss_dssp             HHHHHHHC--CSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCC-TTHHHHCCTTCCEEEEESSCTTTCCCCCHH
T ss_pred             HHHHhhhc--cccccccCCccceeccccccccccceeeeeeccCCccce-eeeeeccccccceeeeecccCcccccchhh
Confidence            98887664  456667789999999999999999999999887777776 556677788899999999999999999999


Q ss_pred             HHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHH
Q 019298          194 HLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVE  273 (343)
Q Consensus       194 ~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~  273 (343)
                      ++++|+++|++|++++|+||+|.++.+.+.....  .....+++++++|+||.|+++|+|+||+++++       ..+.+
T Consensus       165 ~l~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~--~~~~~~~~i~~~S~SK~~~l~GlR~G~~i~~~-------~~~~~  235 (355)
T d1lc5a_         165 LLQAIADRCKSLNINLILDEAFIDFIPHETGFIP--ALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSD-------DAAMA  235 (355)
T ss_dssp             HHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGG--GCTTCTTEEEEEESTTTTTCTTTCCEEEECCC-------HHHHH
T ss_pred             hhhhhhhhccccccccccccceeeeeeecccccc--cccccccceeecccccccccccccccceeccc-------hhhhH
Confidence            9999999999999999999999998876554332  23445689999999999999999999999864       23555


Q ss_pred             HHhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          274 RMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       274 ~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      .+++... .+..+.+++.++ .++|.+...+.+.++.++++++.+.+.|.+++|+.+ .|++|+|+|+++
T Consensus       236 ~~~~~~~-~~~~~~~~~~~a-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~p~~~~f~~~~~  302 (355)
T d1lc5a_         236 RMRRQQM-PWSVNALAALAG-EVALQDSAWQQATWHWLREEGARFYQALCQLPLLTV-YPGRANYLLLRC  302 (355)
T ss_dssp             HHHHHSC-TTCSCHHHHHHH-HHGGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEEE-CCCSSSEEEEEE
T ss_pred             HHHhhcC-Cccccccccccc-cccccccchhHHHHHHHHHHHHHHHHHHhhcCCcEE-CCCCCEEEEEEC
Confidence            5555443 567788888888 778877555556899999999999999999888876 688999999864

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2e-38  Score=284.27  Aligned_cols=272  Identities=17%  Similarity=0.185  Sum_probs=219.5

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHH
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQA  112 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a  112 (343)
                      .++++|+|++|+    +.+++++.+.+++.+.+....++.| |..|.++||+++|+|++++   .+++++|++|+|++++
T Consensus        17 ~~~d~~~l~~~e----np~~~p~~i~~~~~~~~~~~~~~~y-p~~g~~~Lr~aia~~~~~~---~v~~d~I~it~G~~~~   88 (334)
T d2f8ja1          17 EKRDKTYLALNE----NPFPFPEDLVDEVFRRLNSDALRIY-YDSPDEELIEKILSYLDTD---FLSKNNVSVGNGADEI   88 (334)
T ss_dssp             CCCCSEECSSCC----CSSCCCHHHHHHHHHHCCTTGGGSC-CCSSCHHHHHHHHHHHTCS---SCCGGGEEEEEHHHHH
T ss_pred             cCCCceEEECCC----CCCCCCHHHHHHHHHHhhcchhcCC-CCCCcHHHHHHHHHHhccc---CCCcceEEecCcchhH
Confidence            377899999998    4478899999999999877666566 5579999999999999653   3789999999999999


Q ss_pred             HHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298          113 IDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       113 l~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~  192 (343)
                      |..+++    +||+|++++|+|..|...++..|.+++.++++++..  .+     +...++++++++++||||||.+++.
T Consensus        89 l~~l~~----~~d~v~i~~P~y~~~~~~~~~~g~~~v~v~~~~~~~--~~-----~~~~~~~~~l~l~nP~NPtG~~~s~  157 (334)
T d2f8ja1          89 IYVMML----MFDRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLR--IP-----EVNVGEGDVVFIPNPNNPTGHVFER  157 (334)
T ss_dssp             HHHHHH----HSSEEEECSSCCHHHHHHHHHHTCCEEECCCCTTSC--CC-----CCCCCTTEEEEEESSCTTTCCCCCH
T ss_pred             HHHHhh----hccccccccccccccccchhccCCcccccccccccc--cc-----ccccccceEEEecccccccceeecH
Confidence            988765    468999999999999999999999999999875432  11     2234578899999999999999998


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  272 (343)
                      +++.++    .++++++|+||+|.++.+....    ......+++++++|+||+|+++|+|+||++++        ++++
T Consensus       158 ~~l~~~----~~~~~~ii~Dd~~~~~~~~~~~----~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~--------~~~i  221 (334)
T d2f8ja1         158 EEIERI----LKTGAFVALDEAYYEFHGESYV----DFLKKYENLAVIRTFSKAFSLAAQRVGYVVAS--------EKFI  221 (334)
T ss_dssp             HHHHHH----HTTTCEEEEECTTGGGTCCCCG----GGGGTCSSEEEEEESTTTSSCTTTCEEEEEEC--------HHHH
T ss_pred             HHhhcc----ccceeEEeecccchhhcccccc----cccccCceEEEEecCccccchhhhhhhhcccc--------hHHH
Confidence            777654    4579999999999876543322    12234568999999999999999999999995        4788


Q ss_pred             HHHhhhhccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          273 ERMKKYFDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       273 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      ++++.... ..+.+..+|.++ .+.+.+...+.+.++.++++|+.+.+.|+++ |+.+.+++|+ |+|+++
T Consensus       222 ~~l~~~~~-~~~~s~~~~~~a-~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~g~-f~~~~~  288 (334)
T d2f8ja1         222 DAYNRVRL-PFNVSYVSQMFA-KVALDHREIFEERTKFIVEERERMKSALREM-GYRITDSRGN-FVFVFM  288 (334)
T ss_dssp             HHHHHHSC-TTCSCHHHHHHH-HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH-TCEECCCCSS-EEEEEC
T ss_pred             HHHHHhhc-ccccchhhhhhc-ccccccccchhhHHHHHHHHHHHHHHHHHHC-CCeECCCCce-EEEEEC
Confidence            88887765 556788888877 6666664444448899999999999999998 8888666655 788754

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.8e-38  Score=285.66  Aligned_cols=275  Identities=20%  Similarity=0.269  Sum_probs=219.3

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      ..+.|.|+.++.    ++++++.+.        ...+++||++ +..+||+++|+++      ++++++|++|+|++++|
T Consensus        26 ~~~~i~L~~ne~----p~~~~~~~~--------~~~l~rYPd~-~~~~Lr~~ia~~~------gv~pe~I~it~Gs~eai   86 (354)
T d1fg7a_          26 GNGDVWLNANEY----PTAVEFQLT--------QQTLNRYPEC-QPKAVIENYAQYA------GVKPEQVLVSRGADEGI   86 (354)
T ss_dssp             TTCSEECSSCCC----SSCCCCCCC--------CCCTTSCCCS-SCHHHHHHHHHHH------TSCGGGEEEESHHHHHH
T ss_pred             CCCCEEeeCCCC----CCCCCHHHH--------HHHHhcCCCC-cHHHHHHHHHHHh------CCChHHeeeccCchHHH
Confidence            566799998872    344444332        2246789774 5689999999999      68999999999999999


Q ss_pred             HHHHHHhcCCCC-eEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298          114 DVAMALLSRPGA-NILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       114 ~~~~~~l~~~gd-~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~  192 (343)
                      ..++++++++|| +|+++.|+|..|...++..|.+++.++..  ++|.+|+++++..+. +++++++++||||||.+++.
T Consensus        87 ~~~~~~~~~pgd~~Vl~~~P~y~~~~~~~~~~g~~v~~~~~~--~~~~~d~~~l~~~~~-~~~~v~~~~pnNPtG~~~~~  163 (354)
T d1fg7a_          87 ELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTL--DNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINP  163 (354)
T ss_dssp             HHHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCC--TTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCH
T ss_pred             HHHHHHhhccccccccccccccccchhhhhccCceeeccccc--cccccchhhhhhccc-ccceeeccCCCccceeEeee
Confidence            999999999998 58889999999999999999999888764  578899999998764 78999999999999999999


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  272 (343)
                      ++++.+.+.++ ++.++|+||+|.++.++....   ......+++++++||||.|+++|+|+||++++        ++++
T Consensus       164 ~~~~~~~~~~~-~~~~~iidd~~~~f~~~~~~~---~~~~~~~~~iv~~S~SK~~~laGlRiGy~i~~--------~~~i  231 (354)
T d1fg7a_         164 QDFRTLLELTR-GKAIVVADEAYIEFCPQASLA---GWLAEYPHLAILRTLSKAFALAGLRCGFTLAN--------EEVI  231 (354)
T ss_dssp             HHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSG---GGTTTCTTEEEEEESSSTTCCGGGCCEEEEEC--------HHHH
T ss_pred             ccccccccccc-ccccccccccchhhccccccc---hhhcccccceEEeCCccccCCCcccccccccc--------chhh
Confidence            99999888776 578899999998876543321   22345578999999999999999999999985        4788


Q ss_pred             HHHhhhhccccCcchHHHHHHHhccchhhHHHH-HHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          273 ERMKKYFDILGDPATFIQVCIMYGCLSTIMQIM-IHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       273 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l-~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                      +++.+... .+..+.+.+.++..++......+. ...+++.++|+.+.+.+.+++++....|++|+|+|+++
T Consensus       232 ~~l~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~~~~~~~p~~~~f~~~~~  302 (354)
T d1fg7a_         232 NLLMKVIA-PYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARF  302 (354)
T ss_dssp             HHHHHHSC-SSCSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEE
T ss_pred             hhhhhhcC-ccchhhHHHHHHHHHHhhhccccccccchhhhhHHHHHHHHHHhCCCcceeCCCCceEEEEeC
Confidence            98887765 345566666555233322222333 36778889999999999999777766899999999874

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.97  E-value=1e-30  Score=239.03  Aligned_cols=257  Identities=15%  Similarity=0.104  Sum_probs=189.9

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHh--cC-CCCCCCCCC----CCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALL--SE-KFNGYAPTA----GLPLTRRAIAEYLSRDLPYKLTPNDVFVT  106 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~Y~~~~----g~~~lr~~ia~~~~~~~~~~~~~~~i~~~  106 (343)
                      +.=++|+++|+|..+     .|-+++.......  .+ +...|....    -.++|++.|++++....+...+..+|+++
T Consensus        55 ~~~~~~~~~gdp~~~-----~~~w~~~~~~~~~~~~~~~~~sy~~~~~~~~~~~~L~~~i~~lh~~~gna~t~~~~IvvG  129 (425)
T d2hoxa1          55 QGCSADVASGDGLFL-----EEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFG  129 (425)
T ss_dssp             TTCCEECCSCCCGGG-----HHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEE
T ss_pred             CCceeeCCCCCCCCC-----CHHHHhCcccceEEeecccccceecCCccccCCHHHHHHHHHHHhhhCCCCCCCCEEEEC
Confidence            566789999997622     2223322222211  11 222344322    23899999999998766655666689999


Q ss_pred             cChHHHHHHHHHHh--------cCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEE
Q 019298          107 SGCTQAIDVAMALL--------SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALV  178 (343)
Q Consensus       107 ~g~~~al~~~~~~l--------~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~  178 (343)
                      +|++++|+.++++|        ..|||+|+++.|+|+.|...++..+.+...+        .+|.+.+++++++++++++
T Consensus       130 ~Gsteli~~~~~AL~~~~~~~~~~pg~~Vv~~~P~y~~Y~~~~~~~~~~~~~~--------~~D~~~~~~~~~~~~~ii~  201 (425)
T d2hoxa1         130 VGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVW--------AGNAANYVNVSNPEQYIEM  201 (425)
T ss_dssp             SHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEE--------EEEGGGGTTCSCGGGEEEE
T ss_pred             CCHHHHHHHHHHHhccccccccCCCCCEEEEecCccccHHHHHHHcCCCCCcc--------CCCHHHHHhhCCCCceEEE
Confidence            99999999999999        4688999999999999999998888765444        4577888888888899999


Q ss_pred             EeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEE
Q 019298          179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV  258 (343)
Q Consensus       179 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~  258 (343)
                      +|+||||||.+..          +..+++.+|+||+|....|.     ++.  ...+++|+++||||+|+++|+|+||++
T Consensus       202 l~sPnNPtG~l~~----------~v~~~~~~I~DEaY~~~~f~-----~~~--~~~~~~Ivl~S~SK~fglaGlRiGw~i  264 (425)
T d2hoxa1         202 VTSPNNPEGLLRH----------AVIKGCKSIYDMVYYWPHYT-----PIK--YKADEDILLFTMSKFTGHSGSRFGWAL  264 (425)
T ss_dssp             EESSCTTTCCCCC----------CSSTTCEEEEECTTCSTTTS-----CCC--SCBCCSEEEEEHHHHTSCGGGCCEEEE
T ss_pred             EECCCCCCcchhh----------hhhhCCEEEEeccccCcccc-----chh--hhcCCeEEEEeCHHhccCcchheeeEE
Confidence            9999999998732          33468999999999754332     221  233578999999999999999999998


Q ss_pred             EeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHH------------HHHHHHHHHHHHHHhhcCC
Q 019298          259 TTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMI------------HGNFLENFAGSCVPSYKLI  325 (343)
Q Consensus       259 ~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~------------~~~~~~~~~~~~~~~L~~~  325 (343)
                      +++       +.+.+++.+.... ..+++.++|.++ ..+|.+...+..            .++.++++++.+.+.|...
T Consensus       265 ~~~-------~~i~~~~~~~~~~~~~~vs~~~Q~aa-~~aL~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~  336 (425)
T d2hoxa1         265 IKD-------ESVYNNLLNYMTKNTEGTPRETQLRS-LKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQS  336 (425)
T ss_dssp             ECC-------HHHHHHHHHHHHHHTSSCCHHHHHHH-HHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             eCC-------HHHHHHHHHhhccCcccCCHHHHHHH-HHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            864       4677888777543 568889999888 666654333322            6788899999999999886


Q ss_pred             CCc
Q 019298          326 PEL  328 (343)
Q Consensus       326 ~g~  328 (343)
                      +++
T Consensus       337 ~~~  339 (425)
T d2hoxa1         337 DRF  339 (425)
T ss_dssp             SSE
T ss_pred             CCc
Confidence            443

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.93  E-value=2.3e-25  Score=200.76  Aligned_cols=190  Identities=15%  Similarity=0.170  Sum_probs=145.7

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCC---------CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCC
Q 019298           53 TTHVATEAVAEALLSEKFNGYAP---------TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRP  123 (343)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~Y~~---------~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~  123 (343)
                      .++++++++.+..+.-....|..         +.-...+++.+|+|+        ..|++++|+|+++|+..++.+++++
T Consensus        14 l~~~a~~a~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~A~~~--------g~e~~~~t~g~t~a~~~~~~al~~~   85 (364)
T d2e7ja1          14 LTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFL--------GCDVARVTNGAREAKFAVMHSLAKK   85 (364)
T ss_dssp             CCHHHHHHHHHC--------------------CCHHHHHHTHHHHHT--------TSSEEEEESSHHHHHHHHHHHHCCT
T ss_pred             CCHHHHHHHHHHhcCCchhccccccccccccChHHHHHHHHHHHHHh--------CcCEEEEECcHHHHHHHHHHHHhCC
Confidence            56788888765422101111111         112355788888888        3589999999999999999999999


Q ss_pred             CCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-----CceEEEEeCCCCCcccccCHHHHHHH
Q 019298          124 GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-----NTVALVIINPGNPCGNVYSYQHLQKL  198 (343)
Q Consensus       124 gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-----~~~~i~~~~p~nptG~~~~~~~l~~l  198 (343)
                      ||.|+++.++|.+....++..|++++.++++...++.+|++++++.+++     .++++++++|+||||.+.+   +++|
T Consensus        86 gd~Vi~~~~~h~s~~~~~~~~g~~v~~v~~~~~~~~~i~~~~l~~~i~~~~k~~~~~lv~i~~~~n~tG~~~~---l~~I  162 (364)
T d2e7ja1          86 DAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPD---VKKI  162 (364)
T ss_dssp             TCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCC---HHHH
T ss_pred             CcEEEeecccccccchHHHhccceEEEeeeccccccccCHHHHHhhhhhhcccCCceEEEeecCCCCCceeec---chhh
Confidence            9999999999988888889999999999987777788999999998854     3457889999999999965   6788


Q ss_pred             HHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298          199 AETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (343)
Q Consensus       199 ~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~  261 (343)
                      +++|++||+++++|++|+.....    .....++   ..++++|++|.|+.+| ++||+++++
T Consensus       163 ~~ia~~~~i~livD~a~~~g~~~----~~~~~~g---~D~~~~S~~K~~~~~g-~~g~l~~~~  217 (364)
T d2e7ja1         163 AKVCSEYDVPLLVNGAYAIGRMP----VSLKEIG---ADFIVGSGHKSMAASG-PIGVMGMKE  217 (364)
T ss_dssp             HHHHHTTTCCEEEECTTTBTTBC----CCHHHHT---CSEEEEEHHHHSSCCS-SCEEEEECT
T ss_pred             eeccccccchhhccccchhhhhh----hcccccc---cceeeeccccccCCCC-CEEEEEECH
Confidence            99999999999999999753221    1222222   2388999999998877 789998865

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.91  E-value=8.4e-24  Score=190.65  Aligned_cols=219  Identities=16%  Similarity=0.075  Sum_probs=162.4

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      ...+++++...    ..++..+...+.+..        .+.+..+.+++++..++.+.     ....+++++++|+++++
T Consensus        19 ~~~i~~~~gl~----~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~-----~~~~e~~~~~~~~~~a~   81 (366)
T d2aeua1          19 RDALYDLSGLS----GGFLIDEKDKALLNT--------YIGSSYFAEKVNEYGLKHLG-----GDENDKCVGFNRTSSAI   81 (366)
T ss_dssp             GGGCEECSSCC----CCCCCCHHHHHHHTS--------TTHHHHHHHHHHHHHHHHHT-----CCTTEEEEEESSHHHHH
T ss_pred             cchHhhhccCC----CCCCccHHHHHHHHH--------hcCchhhHHHHHHHHHHHcc-----CCCccEEEEeCCHHHHH
Confidence            45567887555    335566655554322        12333456788888888874     23457899999999999


Q ss_pred             HHHHHHhcCCCCeEEEe-CCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298          114 DVAMALLSRPGANILLP-RPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~-~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~  192 (343)
                      ..++.+|..+++.++++ .|+|..+...++..|.+++..  +       |++++++++++++++|++++|+||+  +++.
T Consensus        82 ~~~l~al~~~~~vi~~~~~~~~~~~~~~~~l~g~~~v~~--~-------d~e~l~~~i~~~tk~i~~~~p~n~~--~~~~  150 (366)
T d2aeua1          82 LATILALKPKKVIHYLPELPGHPSIERSCKIVNAKYFES--D-------KVGEILNKIDKDTLVIITGSTMDLK--VIEL  150 (366)
T ss_dssp             HHHHHHHCCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE--S-------CHHHHHTTCCTTEEEEEECBCTTSC--BCCH
T ss_pred             HHHHHHhCCCCEEEEecCCCcchhHHHHHHhcCCeEECC--C-------CHHHHHHhcCCCceEEEEEecCCCC--cCCH
Confidence            99999987554445554 699999999999999875432  1       7999999999999999999999985  3566


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHH
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVV  272 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~  272 (343)
                      +++++|+++|++||+++|+||+|+...++....+......   ..++++|+||.+  +|+|+||++++        ++++
T Consensus       151 ~~l~~i~~ia~~~~~~~i~De~y~~~~~~~~~~~~~~~~~---~di~~~S~sK~~--~g~~~G~i~~~--------~~~i  217 (366)
T d2aeua1         151 ENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLG---ADLVVTSTDKLM--EGPRGGLLAGK--------KELV  217 (366)
T ss_dssp             HHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHT---CSEEEEETTSSS--SSCSCEEEEEE--------HHHH
T ss_pred             HHHHHHHHHhccCcEEEEEecCccccccccccCCCHhhcC---ceEEEecccccc--cccceeEEEec--------HHHH
Confidence            8999999999999999999999998766533222222222   238899999985  58899999996        4799


Q ss_pred             HHHhhhhc-cccCcchHHHHHH
Q 019298          273 ERMKKYFD-ILGDPATFIQVCI  293 (343)
Q Consensus       273 ~~l~~~~~-~~~~~~~~~~~a~  293 (343)
                      ++++.... ...+++++.|.++
T Consensus       218 ~~~~~~~~~~g~~~~~~~~~a~  239 (366)
T d2aeua1         218 DKIYIEGTKFGLEAQPPLLAGI  239 (366)
T ss_dssp             HHHHHHHHTTTCBCCHHHHHHH
T ss_pred             HHHHHHHhcccccCCHHHHHHH
Confidence            99887754 3456777777776

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=2.2e-21  Score=176.32  Aligned_cols=263  Identities=14%  Similarity=0.104  Sum_probs=177.0

Q ss_pred             eEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC--CC----------CHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 019298           38 ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPT--AG----------LPLTRRAIAEYLSRDLPYKLTPNDVFV  105 (343)
Q Consensus        38 i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~--~g----------~~~lr~~ia~~~~~~~~~~~~~~~i~~  105 (343)
                      |-|+.+.     ..+.++.++++|.+.+....  .|+++  ..          ..++|+.+|+++      ++++++|++
T Consensus         4 iYlD~aa-----~~p~~~~v~ea~~~~~~~~~--~~~np~~~~~~~~~~~~~~~~~~R~~iA~~l------g~~~~~I~~   70 (391)
T d1p3wa_           4 IYLDYSA-----TTPVDPRVAEKMMQFMTMDG--TFGNPASRSHRFGWQAEEAVDIARNQIADLV------GADPREIVF   70 (391)
T ss_dssp             EECBTTT-----CCCCCHHHHHHHHTTTSTTS--CCCCTTCTTSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEEE
T ss_pred             EEeeCcc-----ccCCCHHHHHHHHHHHHhcc--ccCCCchhhhHHHHHHHHHHHHHHHHHHHHc------CCCCCcEEE
Confidence            4555554     24688999999999876432  34332  12          236788899999      578999999


Q ss_pred             ecChHHHHHHHHHHh----cCCCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEE
Q 019298          106 TSGCTQAIDVAMALL----SRPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALV  178 (343)
Q Consensus       106 ~~g~~~al~~~~~~l----~~~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~  178 (343)
                      ++|+++++..++.++    .++||+|++.++.|+.+....   +..|.++..++.+.  .+.+|++++++++++++++|+
T Consensus        71 ~~~~t~~l~~~~~~~~~~~~~~gd~Vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~~~~~i~~~T~lv~  148 (391)
T d1p3wa_          71 TSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR--NGIIDLKELEAAMRDDTILVS  148 (391)
T ss_dssp             ESSHHHHHHHHHHHHHHHHGGGCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHCCTTEEEEE
T ss_pred             ECCHHHHHHHHHhhhhhhhcCCCCEEEEeccccchHHHHHHHHHHcCCEEEEeCCCC--CCeEcHHHHHHhCCCCcEEEE
Confidence            999999999888775    479999999999998865543   44589999998753  456899999999999999999


Q ss_pred             EeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEE
Q 019298          179 IINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV  258 (343)
Q Consensus       179 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~  258 (343)
                      +++++||||.+++   +++|+++|+++|+++++|.+|....    .+..+...   +..+++.|.+|.+|.+|  +|++.
T Consensus       149 is~~~n~tG~~~~---~~~I~~~~~~~~~~~ivD~~~~~g~----~~~d~~~~---~~D~~~~s~~k~~g~~g--~g~~~  216 (391)
T d1p3wa_         149 IMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGK----LPIDLSQL---KVDLMSFSGHKIYGPKG--IGALY  216 (391)
T ss_dssp             CCSBCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTBTT----BCCCTTTS---CCSEEEEESTTTTSCSS--CEEEE
T ss_pred             EECCCCCCeeECC---HHHHHHHhccCCcEEEEeeccccCC----ccccchhc---cccccccccccccCCCc--eEEEE
Confidence            9999999999977   4678888999999999999998632    11222222   23388889999988777  57766


Q ss_pred             EeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhh-HHHHHHHHHHHHHHHHHHHhhcCCCCce
Q 019298          259 TTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTI-MQIMIHGNFLENFAGSCVPSYKLIPELI  329 (343)
Q Consensus       259 ~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~-~~~l~~~~~~~~~~~~~~~~L~~~~g~~  329 (343)
                      ++........+.... ...... ..+..+.....++ ...+... ....+..+++++.+..+.+.|..+++..
T Consensus       217 ~~~~~~~~~~~~~~g-g~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~  287 (391)
T d1p3wa_         217 VRRKPRVRIEAQMHG-GGHERGMRSGTLPVHQIVGM-GEAYRIAKEEMATEMERLRGLRNRLWNGIKDIEEVY  287 (391)
T ss_dssp             ECBTTBCCCCCSSCS-SCTTTTTSCSCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTEE
T ss_pred             EecchhcccCCcccC-CccccCcccCcchhhhhhhh-hhhhhHHHHHhhHHHHHHHHHHHHHHHHHHhhcCee
Confidence            654321110000000 000011 1223333333332 2222211 2222256777788888888888875544

>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS)
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=1.4e-19  Score=163.38  Aligned_cols=262  Identities=11%  Similarity=0.068  Sum_probs=190.5

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKF------NGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~  107 (343)
                      +++.+||+..+   |.++..+|+++++..+++++--.      ..++...-+.+|++.+|+|+        ..+..++.+
T Consensus        37 g~~~l~f~s~d---YLGl~~~p~v~~a~~~a~~~~G~~~~~sr~~~g~~~~~~~lE~~LA~~~--------g~e~al~~~  105 (383)
T d1bs0a_          37 DRQYLNFSSND---YLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL--------GYSRALLFI  105 (383)
T ss_dssp             TEEEEECSCCC---TTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH--------TCSEEEEES
T ss_pred             CeEEEEEEccc---ccccCCCHHHHHHHHHHHHHhCCCCCccccccCcchHHHHHHHHHHHhc--------CCCceEEec
Confidence            56788998887   45677899999999999874110      11222233478999999999        467889999


Q ss_pred             ChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC---CceEEEEeCCCC
Q 019298          108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ---NTVALVIINPGN  184 (343)
Q Consensus       108 g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~i~~~~p~n  184 (343)
                      ++..+...++.++..++|.|++....|..+...++..+.+++.++.       -|.+++++.+..   ...+|+++.+++
T Consensus       106 SG~~an~~~i~al~~~~d~v~~d~~~h~si~~g~~~~~~~~~~~~h-------nd~~~le~~l~~~~~~~~~vv~e~v~s  178 (383)
T d1bs0a_         106 SGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASPCPGQQMVVTEGVFS  178 (383)
T ss_dssp             CHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSCCSSCEEEEEESBCT
T ss_pred             ccchhhHHHHHhhcCCCceEEeeccccHHHhhccccCCCcceEecc-------hHHHHHHHHhcccCCCceEEEecCCCC
Confidence            9999999999999999999999999999999988888888887754       367888776643   456778888899


Q ss_pred             CcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCC
Q 019298          185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG  264 (343)
Q Consensus       185 ptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~  264 (343)
                      ++|.+.+.   .+|.++|++||+++++||+|+..+++.........++. ...+++.|++|++|+.|   |++.++    
T Consensus       179 ~~G~i~pl---~~l~~l~~~~~~~livDeah~~gv~G~~g~G~~~~~~~-~~~~~~~t~~ka~g~~G---g~v~~~----  247 (383)
T d1bs0a_         179 MDGDSAPL---AEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKV-KPELLVVTFGKGFGVSG---AAVLCS----  247 (383)
T ss_dssp             TTCCBCCH---HHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTC-CCSEEEEESSSTTSSCC---EEEEEC----
T ss_pred             CCCcccch---hHHHHHHHhcCcEEEeecceeeeecCCcccchHHHcCC-ccccccccccccccccc---cccccc----
Confidence            99999764   56667788999999999999998877543332222222 34467789999999987   888885    


Q ss_pred             CCCchHHHHHHhhhhc--c-ccCcchHHHHHHHhccchh--hHHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298          265 MFRKPKVVERMKKYFD--I-LGDPATFIQVCIMYGCLST--IMQIMIHGNFLENFAGSCVPSYKLIPELIN  330 (343)
Q Consensus       265 ~~~~~~~~~~l~~~~~--~-~~~~~~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~  330 (343)
                          .++++.++....  . +...++....++ .+++.-  .......++++.++...+.+.|.++ |+.+
T Consensus       248 ----~~~~~~l~~~~~~~~~s~~~~p~~~aa~-~~a~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~-g~~~  312 (383)
T d1bs0a_         248 ----STVADYLLQFARHLIYSTSMPPAQAQAL-RASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFTL  312 (383)
T ss_dssp             ----HHHHHHHHHHCHHHHSSBCCCHHHHHHH-HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCEE
T ss_pred             ----hhHHHHHHhhchhhhhcccccchHHHHH-HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhc-CCcc
Confidence                367777776522  2 233344333333 233221  1223337788888999999999888 6664

>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 2-amino-3-ketobutyrate CoA ligase
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=1.5e-19  Score=164.04  Aligned_cols=265  Identities=14%  Similarity=0.060  Sum_probs=185.6

Q ss_pred             cccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 019298           33 NEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYA------PTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT  106 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~------~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~  106 (343)
                      ++++++||+..+   |.++..+|.++++++++++....+.-.      ...-..+|++.+|+|+        ..+.++++
T Consensus        43 dG~~~l~f~s~d---YLGl~~hp~v~~a~~~a~~~~g~~~~~sr~~~g~~~~~~~lE~~lA~~~--------g~e~al~~  111 (401)
T d1fc4a_          43 DGSHVINFCANN---YLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL--------GMEDAILY  111 (401)
T ss_dssp             TSCEEEECCCSC---TTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH--------TCSEEEEE
T ss_pred             CCCEEEEEEccc---cccccCCHHHHHHHHHHHHHhCCCcccceeeccCcHHHHHHHHHHHHhh--------cCCceEEe
Confidence            367889998876   455778999999999998753221111      1223457999999998        46889999


Q ss_pred             cChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhh---cC---CceEEEEe
Q 019298          107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA---DQ---NTVALVII  180 (343)
Q Consensus       107 ~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~---~~---~~~~i~~~  180 (343)
                      +++..+...++.++.+++|.|++..-.|..+...+...+.++..++.       .|.+.+++.+   +.   ...++++.
T Consensus       112 ~SG~~An~~~i~~l~~~~d~i~~d~~~h~s~~~G~~~~~a~~~~~~~-------~d~~~le~~~~~~~~~~~~~~liv~e  184 (401)
T d1fc4a_         112 SSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARHVLIATD  184 (401)
T ss_dssp             SCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSEEEEEE
T ss_pred             cchhhhhHHHHHHhcCCCcEEEeCCcchHHHHccccccCceEEEEcC-------CChHHHHHHHHHhhhcccCceEEEEc
Confidence            99999999999999999999999999999999888888888877653       2555555543   22   23455555


Q ss_pred             CCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC-CCEEEEccCccccCCCCCcEEEEEE
Q 019298          181 NPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST-VPILTLGSLSKRWIVPGWRLGWFVT  259 (343)
Q Consensus       181 ~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~-~~~i~~~S~sK~~~~~G~r~G~i~~  259 (343)
                      ...+..|...   ++.++.++|++||+++|+||+++.++++.........++.. +..++++|++|.|++  ...|++.+
T Consensus       185 gv~s~~G~~~---~L~~l~~L~~~~~a~LivDeah~~g~~g~~G~G~~~~~~~~~~~dii~~tl~Ka~gg--~~Gg~v~g  259 (401)
T d1fc4a_         185 GVFSMDGVIA---NLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGG--ASGGYTAA  259 (401)
T ss_dssp             SEETTTTEEC---CHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCS--SSCEEEEE
T ss_pred             CCCCCCCchh---hhhHHHHHHhhcCcEEEehhhhccccccCCCCccchhccCCCCCeEEEeeccccccc--CCcccccC
Confidence            6677888774   47888888999999999999999988875433222222221 234889999999853  33488777


Q ss_pred             eCCCCCCCchHHHHHHhhhh-c--cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298          260 TDPCGMFRKPKVVERMKKYF-D--ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN  330 (343)
Q Consensus       260 ~~~~~~~~~~~~~~~l~~~~-~--~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~  330 (343)
                      +        .++++.++... .  .+...++....++ ...+......-+.+++++++.+.+.+.+... |+.+
T Consensus       260 ~--------~~~~~~l~~~~~~~~~s~~l~p~~~~aa-~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~-g~~~  323 (401)
T d1fc4a_         260 R--------KEVVEWLRQRSRPYLFSNSLAPAIVAAS-IKVLEMVEAGSELRDRLWANARQFREQMSAA-GFTL  323 (401)
T ss_dssp             C--------HHHHHHHHHHCHHHHHSCCCCHHHHHHH-HHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred             C--------HHHHHHHHcCChhhhhcCCCCHHHHHHH-HhhhcccccCHHHHHHHHHHHHHHHhhhccc-CCcc
Confidence            4        46888776542 1  2334444444444 3333322222237889999999999988876 5554

>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystine C-S lyase C-des
species: Synechocystis sp. [TaxId: 1143]

Probab=99.84  E-value=1.1e-19  Score=164.26  Aligned_cols=271  Identities=13%  Similarity=0.046  Sum_probs=175.0

Q ss_pred             eeEeccCCCCCCCCCCCcHHHHHHHHHHHhcC-CCCCCC--CCC----CCHHHHHHHHHHHhhhCCCCCCCCcEEEecCh
Q 019298           37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSE-KFNGYA--PTA----GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGC  109 (343)
Q Consensus        37 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~--~~~----g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~  109 (343)
                      .+-|+.+..     .+.|+.+.+++.+.++.- ....|.  ...    -..++|+.+|+++      ++++++|++|+|+
T Consensus         8 ~~yld~~~~-----~~~p~~v~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------~~~~~~i~~~~g~   76 (381)
T d1elua_           8 KTYFNFGGQ-----GILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETF------NVDPNTITITDNV   76 (381)
T ss_dssp             SEECCTTTC-----CCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHT------TSCGGGEEEESSH
T ss_pred             CEEeeCCcc-----cCCCHHHHHHHHHHHHHhhcCCCccchhhHHHHHHHHHHHHHHHHHh------CCCcccEEEECCh
Confidence            466777752     345667888887776531 011121  111    1245778888888      5688999999999


Q ss_pred             HHHHHHHHHHh-cCCCCeEEEeCCCCcchH----HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCC
Q 019298          110 TQAIDVAMALL-SRPGANILLPRPGFPIYE----LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGN  184 (343)
Q Consensus       110 ~~al~~~~~~l-~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~n  184 (343)
                      +++++.++.++ .++||+|+++.+.|++..    ..++..|..+..++.........+.+.+++.++++++++++++++|
T Consensus        77 t~a~~~~~~~l~~~~g~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~i~~~t~~v~i~~~~n  156 (381)
T d1elua_          77 TTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLW  156 (381)
T ss_dssp             HHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCT
T ss_pred             HHHhhhcchhhhhcCCceEEEeccccceeeeccccccccccccccccccccccccchHHHHHHhhhcccccccccccccc
Confidence            99999999998 579999999999997543    3455579999988876544333346778888888999999999999


Q ss_pred             CcccccCHHHHHHHHHHHhh----cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEe
Q 019298          185 PCGNVYSYQHLQKLAETANK----LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT  260 (343)
Q Consensus       185 ptG~~~~~~~l~~l~~~~~~----~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~  260 (343)
                      |||...+.+++   .++|++    +++++++|.+++...    .+..+..+   +..+++.|++|.++.+ .++|++.+.
T Consensus       157 ~tG~~~~~~~I---~~l~~~~~~~~~~~~~vD~~~~~g~----~~~~~~~~---~~D~~~~s~~K~~~~p-~G~g~l~~~  225 (381)
T d1elua_         157 NTGQVLPLAEI---MAVCRRHQGNYPVRVLVDGAQSAGS----LPLDFSRL---EVDYYAFTGHKWFAGP-AGVGGLYIH  225 (381)
T ss_dssp             TTCCBCCHHHH---HHHHHHCCSSSCCEEEEECTTTBTT----BCCCTTTS---CCSEEEEESSSTTCCC-TTCEEEEEC
T ss_pred             cccccchhhHH---HHHHhhccccccccccccccccccc----cccccccc---cccccccccccccccc-chhhHHHhh
Confidence            99999887655   555555    469999999988632    22222222   3348999999997653 346777775


Q ss_pred             CCCCCCCchHHHHHHhhh-----------------------hccccCcchHHHHHHHhccchhhHHH--HH-HHHHHHHH
Q 019298          261 DPCGMFRKPKVVERMKKY-----------------------FDILGDPATFIQVCIMYGCLSTIMQI--MI-HGNFLENF  314 (343)
Q Consensus       261 ~~~~~~~~~~~~~~l~~~-----------------------~~~~~~~~~~~~~a~~~~~l~~~~~~--l~-~~~~~~~~  314 (343)
                      ..        ..+++...                       ....+.++.....++ .+++......  .+ ..++..++
T Consensus       226 ~~--------~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~~-~~a~~~~~~~g~~~~~~~~~~~~  296 (381)
T d1elua_         226 GD--------CLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGL-LAALQLHQRQGTAEERYQAICQR  296 (381)
T ss_dssp             TT--------TGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHH-HHHHHHHHHHCCHHHHHHHHHHH
T ss_pred             HH--------HHHhcCcccccccccccccccccccccccccccccccccchhhhhh-hhhhhhHHHhcccccchhhhhhH
Confidence            42        22221100                       001123333333333 3333211111  11 45677788


Q ss_pred             HHHHHHhhcCCCCceeeC---CCCceE
Q 019298          315 AGSCVPSYKLIPELINFK---STGSSL  338 (343)
Q Consensus       315 ~~~~~~~L~~~~g~~~~~---~~~g~~  338 (343)
                      ++++.+.|+++||+.++.   +.++++
T Consensus       297 ~~~l~~~L~~~~~~~~~~~~~~~~~~v  323 (381)
T d1elua_         297 SEFLWRGLNQLPHVHCLATSAPQAGLV  323 (381)
T ss_dssp             HHHHHHHHHHSTTEEESCSSCCSSSEE
T ss_pred             HHHHHHHHhcCCCeEecCCCCccccEE
Confidence            889999999998988543   345543

>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 5-aminolevulinate synthase
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=99.84  E-value=1.8e-19  Score=162.21  Aligned_cols=263  Identities=16%  Similarity=0.095  Sum_probs=186.4

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCC------CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFN------GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~  107 (343)
                      +.+.+||+..+   |.++..+|+++++..++++.--.+      -++...-+.+|++.+|+|+        ..+..++.+
T Consensus        44 ~~~~~~FsSnd---YLGL~~~p~v~~a~~~al~~yG~gs~~Sr~~~G~~~~h~~LE~~lA~~~--------g~e~all~~  112 (396)
T d2bwna1          44 KQDITVWCGND---YLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLH--------QKEAALVFS  112 (396)
T ss_dssp             EEEEEECSCSC---TTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHT--------TCSEEEEES
T ss_pred             CeEEEEEEccc---ccCcCCCHHHHHHHHHHHHHhCCCccccccccCCchHHHHHHHHHHHHh--------CCCceeeee
Confidence            56788999988   566889999999999998742111      1111223468889999998        457888888


Q ss_pred             ChHHHHHHHHHHh--cCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc---C-CceEEEEeC
Q 019298          108 GCTQAIDVAMALL--SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD---Q-NTVALVIIN  181 (343)
Q Consensus       108 g~~~al~~~~~~l--~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~-~~~~i~~~~  181 (343)
                      ++..+...++.+|  ..++|.|+...-.|......++..+.+++.++..       |.+.+++.++   + .++.|++..
T Consensus       113 sG~~An~~~i~~l~~~~~~d~i~~D~~~Hasi~~g~~ls~a~~~~f~Hn-------d~~~l~~l~~~~~~~~~~~iv~eg  185 (396)
T d2bwna1         113 SAYNANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-------DVAHLRELIAADDPAAPKLIAFES  185 (396)
T ss_dssp             CHHHHHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-------CHHHHHHHHHHSCTTSCEEEEEES
T ss_pred             cchHHHHHHHHHHhcccCCCceeehhhhhhccchhhhccccCceEeecc-------hHHHhhhHHhhhcccCceeEEEEe
Confidence            8888888888887  4688999999999999999999999998887542       4566655443   2 445666677


Q ss_pred             CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC-CCCCEEEEccCccccCCCCCcEEEEEEe
Q 019298          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG-STVPILTLGSLSKRWIVPGWRLGWFVTT  260 (343)
Q Consensus       182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~i~~~  260 (343)
                      ..+.+|.+.+   +.+|++++++||+++++||+|+..+++.........++ .....|+++||||+||..|   |++.++
T Consensus       186 vySmdGd~ap---l~~l~~L~~~y~~~L~vDeAHs~Gv~G~~G~G~~~~~~~~~~~di~~gTlsKa~g~~G---g~v~~~  259 (396)
T d2bwna1         186 VYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAAS  259 (396)
T ss_dssp             BCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEEC
T ss_pred             eccCcccccc---cHhHHHHhhhhcceeeeccceeeeeeccccccchhhcCCceeeeeeeecccccccccc---cccchh
Confidence            7899999965   67777788899999999999999888755433222222 1234699999999999998   998874


Q ss_pred             CCCCCCCchHHHHHHhhhhc--ccc-CcchHHHHHHHhccch--hhHHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298          261 DPCGMFRKPKVVERMKKYFD--ILG-DPATFIQVCIMYGCLS--TIMQIMIHGNFLENFAGSCVPSYKLIPELIN  330 (343)
Q Consensus       261 ~~~~~~~~~~~~~~l~~~~~--~~~-~~~~~~~~a~~~~~l~--~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~  330 (343)
                              +++++.++....  .++ ..++....++ .+++.  ...+..+.+..+.++.+.+.+.+..+ |+.+
T Consensus       260 --------~~~i~~l~~~~~~~ifStalpp~~~aa~-~~al~i~~~~~~~~~r~~l~~~~~~~~~~l~~~-g~~~  324 (396)
T d2bwna1         260 --------ARMVDAVRSYAPGFIFSTSLPPAIAAGA-QASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMPI  324 (396)
T ss_dssp             --------HHHHHHHHHHCHHHHTSBCCCHHHHHHH-HHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCCB
T ss_pred             --------HHHHHHHHhhcchhhhcccCcHHHHHHH-HHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhc-CCCc
Confidence                    478888876632  233 3344333333 33332  11334446777778888888888766 5554

>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Pseudomonas putida [TaxId: 303]

Probab=99.80  E-value=2.4e-18  Score=153.45  Aligned_cols=219  Identities=19%  Similarity=0.177  Sum_probs=164.9

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh----cCceeEEeec
Q 019298           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----RHIEVRHFDL  153 (343)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~----~g~~~~~~~~  153 (343)
                      ....|++.++++-        ..+..+++++++.|+..++.+++++||+|+++...|++....+..    .|.++..++.
T Consensus        60 T~~~LE~~la~LE--------g~~~a~~~~SGmaAi~~~l~~l~~~Gd~vl~~~~~Yg~t~~l~~~~~~~~Gi~~~~~d~  131 (392)
T d1gc0a_          60 TLNLLEARMASLE--------GGEAGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM  131 (392)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECT
T ss_pred             HHHHHHHHHHHHh--------CCcceeehhhHHHHHHHHHHhhccCCCeeecccccchhhhhhhhhhhccCCcccccCCc
Confidence            3567888888887        457888999999999999999999999999999999987776544    4777777743


Q ss_pred             CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (343)
Q Consensus       154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~  233 (343)
                             -|.+++++++++++++|++.+|.||+..+   .++++++++|+++|+++++|..++...+.    .++ .++ 
T Consensus       132 -------~d~~~~~~ai~~~t~lv~~Esp~NP~l~v---~Di~~i~~ia~~~g~~~vvDnT~atP~~~----~Pl-~~G-  195 (392)
T d1gc0a_         132 -------ADLQALEAAMTPATRVIYFESPANPNMHM---ADIAGVAKIARKHGATVVVDNTYCTPYLQ----RPL-ELG-  195 (392)
T ss_dssp             -------TCHHHHHHHCCTTEEEEEEESSCTTTCCC---CCHHHHHHHHGGGTCEEEEECTTTHHHHC----CGG-GGT-
T ss_pred             -------cCHHHHHHhCCCCCeEEEecccccceeee---cchHHHHHHHHhcCCEEEEecCccCcccc----ChH-HhC-
Confidence                   37899999999999999999999999999   56788899999999999999999853211    112 222 


Q ss_pred             CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHh--hhhcc-ccCcchHHHHHHHhccchhhHHHHHHHHH
Q 019298          234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK--KYFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGNF  310 (343)
Q Consensus       234 ~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~--~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~  310 (343)
                        -.|++.|.+|.++..|.-+|.+++.+       .+.+.+++  ..+.. ....++.....+..+ |   ..+-.+.++
T Consensus       196 --aDivihS~TKyi~Ghsd~~~G~v~~~-------~~~~~~~r~~~~~~~~G~~~~p~da~ll~rg-l---~TL~lRm~~  262 (392)
T d1gc0a_         196 --ADLVVHSATKYLSGHGDITAGIVVGS-------QALVDRIRLQGLKDMTGAVLSPHDAALLMRG-I---KTLNLRMDR  262 (392)
T ss_dssp             --CSEEEEETTTTTTCSSSCCCEEEEEC-------HHHHHHHHHTHHHHHTCCCCCHHHHHHHHHH-H---TTHHHHHHH
T ss_pred             --CCEEEEecceeecCCcccccccccch-------hHHHHHHHHHHHHHccCCcCChhhHHHHHhc-c---ccHHHHHHH
Confidence              23999999999988776666655543       34555443  33432 456677766666111 1   222228888


Q ss_pred             HHHHHHHHHHhhcCCCCce-eeCC
Q 019298          311 LENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       311 ~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      ..++...+.+.|+.+|.+. |+.|
T Consensus       263 ~~~nA~~lA~~L~~hp~V~~V~yP  286 (392)
T d1gc0a_         263 HCANAQVLAEFLARQPQVELIHYP  286 (392)
T ss_dssp             HHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred             HHHHHHHHHHHHHhCCCccEEeec
Confidence            8899999999999988777 5554

>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Citrobacter freundii [TaxId: 546]

Probab=99.79  E-value=1e-17  Score=149.39  Aligned_cols=219  Identities=16%  Similarity=0.129  Sum_probs=164.8

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH----HHhcCceeEEeec
Q 019298           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFDL  153 (343)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~~  153 (343)
                      ....|++.++++-        ..+..+++++++.|+..++.+++++||+|++++..|.+....    ....|.++..++.
T Consensus        64 T~~~LE~~la~LE--------gg~~a~~~sSGmaAi~~~l~~ll~~Gd~vi~~~~~Yg~t~~~~~~~l~~~Gi~~~~vd~  135 (397)
T d1y4ia1          64 TTDALEKKLAVLE--------RGEAGLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDA  135 (397)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECT
T ss_pred             HHHHHHHHHHHHh--------CCccceeehHHHHHHHHHHhhccCCCCeeeeecccccccchhhhcccCCCceEeeccCC
Confidence            3456778888777        356788899999999999999999999999999999776554    3456888888753


Q ss_pred             CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (343)
Q Consensus       154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~  233 (343)
                             -|.+.+++++++++++|++.+|.||+..+   .++++++++|+++|+++++|..++.-...    .++ .++ 
T Consensus       136 -------~d~~~~~~~i~~~Tklv~~Esp~NP~l~v---~Di~~i~~iA~~~gi~~vvDnT~atP~~~----~Pl-~~G-  199 (397)
T d1y4ia1         136 -------GKPEEIRAAMRPETKVVYIETPANPTLSL---VDIETVAGIAHQQGALLVVDNTFMSPYCQ----QPL-QLG-  199 (397)
T ss_dssp             -------TSHHHHHHHCCTTEEEEEEESSCTTTCCC---CCHHHHHHHHHHTTCEEEEECTTTCTTTC----CGG-GGT-
T ss_pred             -------CCHHHHHHhcCCCCcEEEecCCcccceee---cccHHHHHHhhcCCceEEecCcccCcccC----cch-hcC-
Confidence                   36899999999999999999999999999   56788899999999999999998852211    121 122 


Q ss_pred             CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHH--hhhhcc-ccCcchHHHHHHHhccchhhHHHHHHHHH
Q 019298          234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERM--KKYFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGNF  310 (343)
Q Consensus       234 ~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l--~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~  310 (343)
                        -.|++.|++|.++..+.-+|.+++.+       .+.+.+.  ...+.. ....+|.....+ ..-|   ..+--+.++
T Consensus       200 --aDivihS~TKyi~Ghsdvl~G~v~~~-------~~~~~~~r~~~~~~~~G~~l~p~~a~l~-~rgl---~TL~lRm~~  266 (397)
T d1y4ia1         200 --ADIVVHSVTKYINGHGDVIGGIIVGK-------QEFIDQARFVGLKDITGGCMSPFNAWLT-LRGV---KTLGIRMER  266 (397)
T ss_dssp             --CSEEEEETTTTTTCSSCCCCEEEEEC-------HHHHHHHHHTHHHHTTCCCCCHHHHHHH-HHHH---TTHHHHHHH
T ss_pred             --CCEEEEehhhhcCCCcceeeeccCCC-------HHHHHHHHHHHHHhCcCCcCCHHHHHHH-HcCc---CcHHHHHHH
Confidence              23999999999999887777766654       3455443  333433 456677766666 1111   111127788


Q ss_pred             HHHHHHHHHHhhcCCCCce-eeCC
Q 019298          311 LENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       311 ~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      ..++...+.++|+.+|.+. |+.|
T Consensus       267 ~~~nA~~lA~~L~~hp~V~~V~yP  290 (397)
T d1y4ia1         267 HCENALKIARFLEGHPSITRVYYP  290 (397)
T ss_dssp             HHHHHHHHHHHHHTCTTEEEEECT
T ss_pred             HHHHHHHHHHHHHhCCCcCeEeCC
Confidence            8899999999999998876 6555

>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.78  E-value=1.8e-17  Score=147.49  Aligned_cols=218  Identities=13%  Similarity=0.117  Sum_probs=160.3

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh----cCceeEEeecC
Q 019298           79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----RHIEVRHFDLL  154 (343)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~----~g~~~~~~~~~  154 (343)
                      ...|++.++++-        ..+..+++++++.||.. +..++++||+|++..+.|.+....++.    .|..+..++. 
T Consensus        51 ~~~le~~la~LE--------~~~~a~~fsSGMaAisa-ll~ll~~Gd~vv~~~~~Yg~t~~l~~~~~~~~gi~~~~~d~-  120 (380)
T d1ibja_          51 RDALESLLAKLD--------KADRAFCFTSGMAALSA-VTHLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT-  120 (380)
T ss_dssp             HHHHHHHHHHHH--------TCSEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECT-
T ss_pred             HHHHHHHHHHHc--------CCceEEehhhHHHHHHH-HHHhhCCCCEEEEEecccccccchhhhhhccccccccccCc-
Confidence            457888888877        35678888999999975 557889999999999999888776654    3666666642 


Q ss_pred             CCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCC
Q 019298          155 PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGST  234 (343)
Q Consensus       155 ~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~  234 (343)
                            .|.+++++++++++++|++.+|.||+..+   .++++++++|+++|+++|+|+.++.....    .++ .++  
T Consensus       121 ------~~~~~~~~ai~~~t~li~~EtpsNP~l~v---~Di~~i~~iA~~~g~~~vVDnT~atP~~~----~Pl-~~G--  184 (380)
T d1ibja_         121 ------TKLDEVAAAIGPQTKLVWLESPTNPRQQI---SDIRKISEMAHAQGALVLVDNSIMSPVLS----RPL-ELG--  184 (380)
T ss_dssp             ------TSHHHHHHHCCSSEEEEEECSSCTTTCCC---CCHHHHHHHHHTTTCEEEEECTTTCTTTC----CGG-GTT--
T ss_pred             ------chHHHHHHHhccCccEEEecccccccccc---ccHHHHHHHHHHcCCeEEeeccccccccc----ccc-ccC--
Confidence                  36899999999999999999999999999   55788888899999999999999753211    122 122  


Q ss_pred             CCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHHHHHHHHH
Q 019298          235 VPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGNFLEN  313 (343)
Q Consensus       235 ~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~  313 (343)
                       -.|++.|++|.++..|--+|-+++.+.      .++.++++..... ....++.....+ ..-|   ..+-.+.++..+
T Consensus       185 -aDiVvhS~TKyi~GhsDv~~G~v~~~~------~~~~~~~~~~~~~~G~~l~p~~a~ll-~rgl---~Tl~lRm~~~~~  253 (380)
T d1ibja_         185 -ADIVMHSATKFIAGHSDVMAGVLAVKG------EKLAKEVYFLQNSEGSGLAPFDCWLC-LRGI---KTMALRIEKQQE  253 (380)
T ss_dssp             -CSEEEEETTTTTTCSSCCCCEEEEECS------HHHHHHHHHHHHHTTCBCCHHHHHHH-HHHH---TTHHHHHHHHHH
T ss_pred             -CCEEEecccceeccccCccccccccch------hhHHHHHHhhccccCCcCCHHHHHHH-Hhcc---hhhhhhHHHHHH
Confidence             239999999999998876666554432      3566666666443 345566665555 1111   222228888889


Q ss_pred             HHHHHHHhhcCCCCce-eeCC
Q 019298          314 FAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       314 ~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      +...+.++|+++|.+. |+.|
T Consensus       254 nA~~lA~~L~~hp~V~~V~yP  274 (380)
T d1ibja_         254 NARKIAMYLSSHPRVKKVYYA  274 (380)
T ss_dssp             HHHHHHHHHHTCTTCCEEECT
T ss_pred             HHHHHHHHHHhCCCeeEEecc
Confidence            9999999999988776 5554

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.78  E-value=8.9e-20  Score=161.48  Aligned_cols=274  Identities=14%  Similarity=0.043  Sum_probs=169.9

Q ss_pred             eEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHH
Q 019298           38 ISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAM  117 (343)
Q Consensus        38 i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~  117 (343)
                      |||.....     ..++|++++||.++...+  ..|++.+...+|++.+|+++        ..+++++++|+++|+..++
T Consensus         2 ~~~~~~~~-----t~p~p~v~~A~~~a~~g~--~~yg~~p~~~~le~~lA~~~--------G~~~~~~~~sGt~A~~~al   66 (343)
T d1m6sa_           2 IDLRSDTV-----TKPTEEMRKAMAQAEVGD--DVYGEDPTINELERLAAETF--------GKEAALFVPSGTMGNQVSI   66 (343)
T ss_dssp             EECSCGGG-----CCCCHHHHHHHHTCCCCC--GGGTCCHHHHHHHHHHHHHT--------TCSEEEEESCHHHHHHHHH
T ss_pred             cccccccC-----CCCCHHHHHHHHhhhcCC--cccCCCHHHHHHHHHHHHHH--------CCCeEEEeCCHHHHHHHHH
Confidence            66754442     245689999998764322  34777667889999999998        3468899999999999999


Q ss_pred             HHhcCCCCeEEEeCCCCcchHH---HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------CceEE-EEeCCCCCcc
Q 019298          118 ALLSRPGANILLPRPGFPIYEL---SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVAL-VIINPGNPCG  187 (343)
Q Consensus       118 ~~l~~~gd~vl~~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i-~~~~p~nptG  187 (343)
                      +++.++||.+++..+.+..+..   .....+..+..++.   .....|++.+++.+..      .+..+ +.+.++|+.|
T Consensus        67 ~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  143 (343)
T d1m6sa_          67 MAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPVPG---KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGG  143 (343)
T ss_dssp             HHHCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEECE---ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTS
T ss_pred             HHHhccCCceeccccccceeeecccccccccceeecccc---ccCccCHHHHHHhhhhhhcccccccccccccccccCCc
Confidence            9999999999999998865432   33334444444433   3345789998887754      23333 4456689999


Q ss_pred             cccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCC
Q 019298          188 NVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFR  267 (343)
Q Consensus       188 ~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~  267 (343)
                      .+.+.+++.+|+++|+++++++++|++|..+...............  ....+.  +|..+..|.+.|+++..       
T Consensus       144 ~~~~~~~l~~i~~~~~~~g~~~~~D~a~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~g~~~~~~~~~-------  212 (343)
T d1m6sa_         144 RVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGY--ADSVMF--CLSKGLCAPVGSVVVGD-------  212 (343)
T ss_dssp             BCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHT--CSEEEE--ESSSTTCCSSCEEEEEC-------
T ss_pred             eecCHHHHHHHHHHHHhcCeEEEeccccccccccccccchhhhccc--cccccc--ccccccccccccccccc-------
Confidence            9999999999999999999999999999876543221111111111  123333  33334556667777764       


Q ss_pred             chHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeecC
Q 019298          268 KPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLDL  343 (343)
Q Consensus       268 ~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~l  343 (343)
                       .+.+......... ....+.....++ ..... .....+..+...++...+.+.+..+++.....|.+++++|+++
T Consensus       213 -~~~~~~~~~~~~~~~~~~~~~~~~~a-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  286 (343)
T d1m6sa_         213 -RDFIERARKARKMLGGGMRQAGVLAA-AGIIA-LTKMVDRLKEDHENARFLALKLKEIGYSVNPEDVKTNMVILRT  286 (343)
T ss_dssp             -HHHHHHHHHHHHHHTCCCSSTHHHHH-HHHHH-HHHSSTTHHHHHHHHHHHHHHHHHHTCBCCGGGCCSSEEEEEC
T ss_pred             -HHHHhhhHhhCcccccccchhHHHHH-hhhhh-hhhhHHHHHHHHHHHHHhhhHHHHhccCccCCCCCceEEEEEe
Confidence             3555555444321 222222222222 11100 0111114444555555566666555455555677788888753

>d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=5.8e-17  Score=144.18  Aligned_cols=220  Identities=16%  Similarity=0.169  Sum_probs=162.0

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHH----hcCceeEEeec
Q 019298           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAA----FRHIEVRHFDL  153 (343)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~----~~g~~~~~~~~  153 (343)
                      ....|++.++++-        ..+..+++++++.|+..++.+++++||.|++....|......+.    ..|..+..++.
T Consensus        51 t~~~le~~la~LE--------gg~~a~~~sSGMaAi~~~l~~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~g~~~~~~d~  122 (384)
T d1cs1a_          51 TRDVVQRALAELE--------GGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQ  122 (384)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECT
T ss_pred             HHHHHHHHHHHHh--------CCCceEEecChHHHHHHHHhhcccccceecccccccchhhhhhhhhhcccccccccccC
Confidence            3467888888887        35788999999999999999999999999999999977654443    34666665532


Q ss_pred             CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (343)
Q Consensus       154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~  233 (343)
                             .|.+++++.+++++++|++.+|.||+..+   .++++++++|+++|+++|+|+.++...+-    .++ .++ 
T Consensus       123 -------~d~~~~~~~~~~~t~~v~~EspsNP~l~v---~Di~~i~~ia~~~g~~~vVDNT~atP~~~----~Pl-~~G-  186 (384)
T d1cs1a_         123 -------GDEQALRAALAEKPKLVLVESPSNPLLRV---VDIAKICHLAREVGAVSVVDNTFLSPALQ----NPL-ALG-  186 (384)
T ss_dssp             -------TCHHHHHHHHHTCCSEEEEECSCTTTCCC---CCHHHHHHHHHHTTCEEEEECTTTCTTTC----CGG-GGT-
T ss_pred             -------CCHHHHHhhccccccEEEEecccccccee---ccHHHHhhhhhhcCcEEEEeccccCcccc----ccc-ccC-
Confidence                   37899999999999999999999999999   55778888899999999999999752211    111 122 


Q ss_pred             CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHHHHHHHH
Q 019298          234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLE  312 (343)
Q Consensus       234 ~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~  312 (343)
                        -.|++.|.+|.++..|.-+|-+++.+      ++.+.+.++.... .....++.....+ ..-|   ..+--+.++..
T Consensus       187 --aDiVvhS~TKyi~Ghsdv~~G~vv~~------~~~~~~~~~~~~~~~G~~~~p~~a~ll-~rgL---~TL~lRm~~~~  254 (384)
T d1cs1a_         187 --ADLVLHSCTKYLNGHSDVVAGVVIAK------DPDVVTELAWWANNIGVTGGAFDSYLL-LRGL---RTLVPRMELAQ  254 (384)
T ss_dssp             --CSEEEEETTTTTTCSSCCCCEEEEES------SHHHHHHHHHHHHHHTCBCCHHHHHHH-HHHH---TTHHHHHHHHH
T ss_pred             --CCEEEEccccccccCCCcccccccCC------chhhhhhhhhhhhhhhhccccccHHHH-hhcc---chhHHHHHHHH
Confidence              23999999999999886666655443      2456666665543 2445566655555 1111   22222888889


Q ss_pred             HHHHHHHHhhcCCCCce-eeCC
Q 019298          313 NFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       313 ~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      ++...+.++|+.+|.+. ++.|
T Consensus       255 ~nA~~lA~~L~~hp~V~~V~yP  276 (384)
T d1cs1a_         255 RNAQAIVKYLQTQPLVKKLYHP  276 (384)
T ss_dssp             HHHHHHHHHHTTCTTEEEEECT
T ss_pred             HHHHHHHHhcccCCceeeeeec
Confidence            99999999999988876 5555

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

Probab=99.76  E-value=8.2e-17  Score=146.41  Aligned_cols=203  Identities=18%  Similarity=0.178  Sum_probs=152.6

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC--C------CCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP--T------AGLPLTRRAIAEYLSRDLPYKLTPNDVFV  105 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~--~------~g~~~lr~~ia~~~~~~~~~~~~~~~i~~  105 (343)
                      +++.+-|+.+.-     .+.++.+.+++.+.+++...+....  .      .-..+.|+.++++++.     ..+++|++
T Consensus        20 ~~~~iYld~a~~-----~~~p~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~e~~R~~ia~~l~~-----~~~~~i~~   89 (405)
T d1jf9a_          20 GLPLAYLDSAAS-----AQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINA-----RSAEELVF   89 (405)
T ss_dssp             TEECEECCTTTC-----CCCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTC-----SCGGGEEE
T ss_pred             CCCeEEEeCccc-----cCCCHHHHHHHHHHHHhccCCCccchhHHHHHHHHHHHHHHHHHHHHcCC-----CCcccccc
Confidence            456688887762     4678999999988876532111100  0      1134667888888831     34689999


Q ss_pred             ecChHHHHHHHHHHh----cCCCCeEEEeCCCCcch----HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEE
Q 019298          106 TSGCTQAIDVAMALL----SRPGANILLPRPGFPIY----ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVAL  177 (343)
Q Consensus       106 ~~g~~~al~~~~~~l----~~~gd~vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i  177 (343)
                      ++|+++++..++.++    .++||.|++..-.|++.    ...++..|++++.++++++  ..+|++.++++++++++++
T Consensus        90 ~~~~T~~~~~~~~~~~~~~~~~g~~il~~~~e~~s~~~~~~~~a~~~g~~v~~~~~~~~--g~~~~~~~~~~i~~~t~lv  167 (405)
T d1jf9a_          90 VRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPD--GTLQLETLPTLFDEKTRLL  167 (405)
T ss_dssp             ESSHHHHHHHHHHHHHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTT--SCBCGGGHHHHCCTTEEEE
T ss_pred             cCcHHHHHHHHHhcccccccCCCCEEEEEeCcccchHHHHHHHHHHcCcEEEEECCCCC--CcCCHHHHHHhccCCcEEE
Confidence            999999999888763    47899999999999874    3455667999999988753  4689999999999999999


Q ss_pred             EEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEE
Q 019298          178 VIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF  257 (343)
Q Consensus       178 ~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i  257 (343)
                      +++..+|.||..++   +++|+++|+++|+++++|.+++...    .+..+...+.   .+++.|++|.+|.+|  +|++
T Consensus       168 ~~~~v~~~tG~~~p---i~~i~~~~~~~g~~~~vD~~q~~g~----~~id~~~~~~---D~~~~s~hK~~Gp~G--~g~l  235 (405)
T d1jf9a_         168 AITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMH----HPVDVQALDC---DFYVFSGHKLYGPTG--IGIL  235 (405)
T ss_dssp             EEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTT----SCCCHHHHTC---SEEEEEGGGTTSCSS--CEEE
T ss_pred             EEecCCCcccccCc---hHHhhhHHHHcCCeeecccceeccc----cccchhhcCC---ceeeccccccccCCC--ceee
Confidence            99999999999966   5667888899999999999998732    2222333333   399999999988777  6777


Q ss_pred             EEe
Q 019298          258 VTT  260 (343)
Q Consensus       258 ~~~  260 (343)
                      .++
T Consensus       236 ~v~  238 (405)
T d1jf9a_         236 YVK  238 (405)
T ss_dssp             EEC
T ss_pred             eec
Confidence            764

>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase ArnB
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.75  E-value=1.3e-16  Score=143.49  Aligned_cols=191  Identities=15%  Similarity=0.116  Sum_probs=144.0

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeCC
Q 019298           54 THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRP  132 (343)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~p  132 (343)
                      .++-++++.+.++.+.   |...+...+|++.++++++        .++++++++++.|+..+++++ +++||+|+++..
T Consensus        11 ~~~~~~~~~~~~~~~~---~~~G~~v~~~E~~la~~~g--------~~~ai~~~sgt~Al~~al~al~~~~gdeVi~~~~   79 (376)
T d1mdoa_          11 GAEELAAVKTVLDSGW---ITTGPKNQELEAAFCRLTG--------NQYAVAVSSATAGMHIALMALGIGEGDEVITPSM   79 (376)
T ss_dssp             CHHHHHHHHHHHHHTC---CSSSHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESS
T ss_pred             CHHHHHHHHHHHhcCC---CcCCHHHHHHHHHHHHHHC--------cCeEEEeCCHHHHHHHHHHHhCCCCCCEEEEecc
Confidence            4566677888887653   3333357899999999993        468888999999999999998 789999999999


Q ss_pred             CCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEc
Q 019298          133 GFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIAD  212 (343)
Q Consensus       133 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D  212 (343)
                      +|......+...|.+.+.+++++ +.+.+|++.|++++++++++|+++   |..|...   ++++|.++|+++|+++|+|
T Consensus        80 ~~~~~~~ai~~~g~~pv~~d~~~-~~~~~d~~~l~~~i~~~tkaIi~~---h~~G~~~---~~~~i~~i~~~~~i~vIeD  152 (376)
T d1mdoa_          80 TWVSTLNMIVLLGANPVMVDVDR-DTLMVTPEHIEAAITPQTKAIIPV---HYAGAPA---DLDAIYALGERYGIPVIED  152 (376)
T ss_dssp             SCHHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEECCB---CGGGCCC---CHHHHHHHHHHHTCCBCEE
T ss_pred             cccccccchhccccceeeecccc-cccCCCHHHHHHhcCCCCeEEEEe---CCCCCcc---chhHHHHHHHhcCceEEec
Confidence            99999999999999999999876 456899999999999999988865   4678774   5677888888999999999


Q ss_pred             cCCCcccc-CCCCCCcccccCCCCCEEEEccC--ccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh
Q 019298          213 EVYGHLVF-GDKPFVPMGVFGSTVPILTLGSL--SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF  279 (343)
Q Consensus       213 ~ay~~~~~-~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~  279 (343)
                      .+++.... .+..      ....+  ..+.||  +|.++. | ..|.+++.+       .++.++++...
T Consensus       153 ~a~a~g~~~~~~~------~g~~g--~~~~Sf~~~K~l~~-g-~GG~i~t~~-------~~l~~~~~~~~  205 (376)
T d1mdoa_         153 AAHATGTSYKGRH------IGARG--TAIFSFHAIKNITC-A-EGGIVVTDN-------PQFADKLRSLK  205 (376)
T ss_dssp             CTTCTTCEETTEE------TTSSS--EEEEECCTTSSSCS-S-SCEEEEESC-------HHHHHHHHHHT
T ss_pred             cchhccCeeCCee------ccccc--CccccCCCcCCCCC-C-CCCEEEEec-------hhHHHHHHhhc
Confidence            99987431 1111      11222  234455  577543 2 357666643       46777676553

>d2ctza1 c.67.1.3 (A:1-421) O-acetyl-L-homoserine sulfhydrylase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: O-acetyl-L-homoserine sulfhydrylase
species: Thermus thermophilus [TaxId: 274]

Probab=99.75  E-value=9.9e-17  Score=144.07  Aligned_cols=227  Identities=16%  Similarity=0.095  Sum_probs=160.9

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHH----HhcCceeEEeec
Q 019298           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA----AFRHIEVRHFDL  153 (343)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~----~~~g~~~~~~~~  153 (343)
                      ....|++.++++-        ..+..+++++++.|+..++.+++++||+|+++...|++....+    ...|..+..++.
T Consensus        59 T~~~LE~~la~LE--------~~~~a~~~~SGmaAi~~~~~~l~~~gd~il~~~~~Yg~t~~l~~~~~~~~gi~~~~~d~  130 (421)
T d2ctza1          59 TVDVLEKRLAALE--------GGKAALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSR  130 (421)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCT
T ss_pred             HHHHHHHHHHHHh--------CCCeEEEecChHHHHHHHHHhhcccccceeecCCcCCchhHHHHHHHhhccccceeccc
Confidence            3457888888877        3577889999999999999999999999999999998766544    456777776643


Q ss_pred             CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCc-cccCCCCCCcccccC
Q 019298          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPMGVFG  232 (343)
Q Consensus       154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~-~~~~~~~~~~~~~~~  232 (343)
                      .      -+.+..+..+++++++|++.+|.||+..+   .++++|+++|+++|+++|+|+.++. ...    ..++ .++
T Consensus       131 ~------~~~~~~~~~~~~~t~li~~EtpsNP~l~v---~Di~~i~~iA~~~g~~~vvDnT~a~tP~~----~~Pl-~~G  196 (421)
T d2ctza1         131 E------ERPEEFLALTDEKTRAWWVESIGNPALNI---PDLEALAQAAREKGVALIVDNTFGMGGYL----LRPL-AWG  196 (421)
T ss_dssp             T------CCHHHHHHHCCTTEEEEEEESSCTTTCCC---CCHHHHHHHHHHHTCEEEEECGGGGGGTS----CCGG-GGT
T ss_pred             c------cCcchhccccCCCceEEEEcCCCcceeEe---cchHHHHHHHHhcCCceEeccccccccee----cccc-ccC
Confidence            1      13456666778899999999999999999   5678889999999999999999972 110    1121 122


Q ss_pred             CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCc------------------------hHHHHHHhhh--hccccCcc
Q 019298          233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRK------------------------PKVVERMKKY--FDILGDPA  286 (343)
Q Consensus       233 ~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~------------------------~~~~~~l~~~--~~~~~~~~  286 (343)
                         -.|++.|.+|.++..|.-+|-+++.+....+.+                        ..++.+.+..  +......+
T Consensus       197 ---aDiVvhS~TKyl~GHsD~l~G~vv~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~s  273 (421)
T d2ctza1         197 ---AALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALG  273 (421)
T ss_dssp             ---CSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCC
T ss_pred             ---CcEEEEechhhccCCCCeEEEEEEcCCcchhhhcccccccCCchhhhhhHHHHHhccHHHHHHHHHHHHHhccCCCC
Confidence               239999999999998888888777665543311                        0112222111  22344666


Q ss_pred             hHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce-eeCC
Q 019298          287 TFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       287 ~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      |.....+ ..-|   .-+--+.++..++...+.+.|+++|.+. |+.|
T Consensus       274 P~~a~l~-~rgl---~TL~lRm~~~~~nA~~vA~~L~~hp~V~~V~yP  317 (421)
T d2ctza1         274 PFEAWVV-LLGM---ETLSLRAERHVENTLHLAHWLLEQPQVAWVNYP  317 (421)
T ss_dssp             HHHHHHH-HHHH---TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECT
T ss_pred             HHHHHHH-hcCC---cchhhHHHHHHHHHHHHHhhhccCCCeeEEecC
Confidence            7665555 1111   1122288888899999999999988876 5555

>d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=99.75  E-value=1.7e-16  Score=141.72  Aligned_cols=219  Identities=14%  Similarity=0.114  Sum_probs=162.1

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh----cCceeEEeec
Q 019298           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----RHIEVRHFDL  153 (343)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~----~g~~~~~~~~  153 (343)
                      ....|++.++++-        ..+..+++++++.|+..++.+++++||.|++....|++....+..    .|..+..++.
T Consensus        68 t~~~LE~~la~LE--------gg~~a~~~sSGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~t~~l~~~~~~~~gi~~~~~~~  139 (398)
T d1qgna_          68 TTVVLEEKISALE--------GAESTLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDP  139 (398)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECS
T ss_pred             HHHHHHHHHHHHh--------CCceEEEecCcchHHHHHHhhcccccccccccccccchhhhhhcccccccccccccccc
Confidence            3457888888887        357889999999999999999999999999999999887665543    4666666632


Q ss_pred             CCCCCCCCCHHHHH-hhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccC
Q 019298          154 LPDKGWEVDLDDIE-SLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFG  232 (343)
Q Consensus       154 ~~~~~~~~d~~~l~-~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~  232 (343)
                             .+.+..+ ...++++++|++.+|.||+..+   .++++|+++|+++|+++|+|..++....-    .++ .+ 
T Consensus       140 -------~~~~~~~~~~~~~~t~~v~~EspsNP~l~v---~Di~~ia~ia~~~g~~~vVDnT~atP~~~----~Pl-~~-  203 (398)
T d1qgna_         140 -------ADVGALELALNQKKVNLFFTESPTNPFLRC---VDIELVSKLCHEKGALVCIDGTFATPLNQ----KAL-AL-  203 (398)
T ss_dssp             -------SCHHHHHHHHHHSCEEEEEEESSCTTTCCC---CCHHHHHHHHHHTTCEEEEECTTTCTTTC----CTT-TT-
T ss_pred             -------cchhhhhhhhccccceEEEccCcccccccc---chHHHHHHHHhhcCCEEEecceeeccccC----Cch-hh-
Confidence                   2444444 4556789999999999999999   56788899999999999999999752211    111 12 


Q ss_pred             CCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHHHHHHH
Q 019298          233 STVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGNFL  311 (343)
Q Consensus       233 ~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~  311 (343)
                        +-.|++.|++|.++..|.-+|.+++.+       .+++..++..... ....++.....+..+ |   ..+--+.++.
T Consensus       204 --GaDiVihS~TKy~~Ghsdv~~G~v~~~-------~~~~~~~~~~~~~~G~~l~p~~a~ll~rg-l---~TL~lRm~~~  270 (398)
T d1qgna_         204 --GADLVLHSATKFLGGHNDVLAGCISGP-------LKLVSEIRNLHHILGGALNPNAAYLIIRG-M---KTLHLRVQQQ  270 (398)
T ss_dssp             --TCSEEEECTTTTTTCSSSCCCEEEEEC-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHH-G---GGHHHHHHHH
T ss_pred             --CCCEEEEechhhcCcccceeehhhcch-------hhhhhhhhhhcccCCCcCCHHHHHHHHhc-c---hHHHHHHHHH
Confidence              223999999999999887777666643       4677777766543 446677766665111 1   2222388888


Q ss_pred             HHHHHHHHHhhcCCCCce-eeCC
Q 019298          312 ENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       312 ~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      .++...+.++|+.+|.+. |..|
T Consensus       271 ~~nA~~lA~~L~~hp~V~~V~yP  293 (398)
T d1qgna_         271 NSTALRMAEILEAHPKVRHVYYP  293 (398)
T ss_dssp             HHHHHHHHHHHHTCTTEEEEECT
T ss_pred             HHHHHHHHHHHHhCCCeeecCCC
Confidence            999999999999998877 6555

>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.75  E-value=1.5e-16  Score=143.18  Aligned_cols=187  Identities=16%  Similarity=0.187  Sum_probs=143.0

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCC-----------CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHH
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAPTAG-----------LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMAL  119 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g-----------~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~  119 (343)
                      .++++.+.+++.+.+.+.    |..+.+           ..+.|+.+++++      ++++++|++++|+++++..++..
T Consensus        11 ~~~p~~v~ea~~~~~~~~----~~np~~~~~~~~~~~~~~~~aR~~ia~l~------~~~~~~i~~~~~~T~~l~~~~~~   80 (376)
T d1eg5a_          11 TRVDDRVLEEMIVFYREK----YGNPNSAHGMGIEANLHMEKAREKVAKVL------GVSPSEIFFTSCATESINWILKT   80 (376)
T ss_dssp             CCCCHHHHHHHHHHHHTC----CCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TSCGGGEEEESCHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHHHc----CCCCccccHHHHHHHHHHHHHHHHHHHHc------CCCCCcEEEECCHHHHHHhhhhc
Confidence            467889999999988753    222211           235688899998      67899999999999999998865


Q ss_pred             h----cCCCCeEEEeCCCCcchHHHH---HhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCH
Q 019298          120 L----SRPGANILLPRPGFPIYELSA---AFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSY  192 (343)
Q Consensus       120 l----~~~gd~vl~~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~  192 (343)
                      +    ..+|+.|++....|+.+....   +..|.+++.++++.  ++.+|+++++++++++++++++++++|+||...+.
T Consensus        81 ~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~v~~vp~~~--~~~id~~~l~~~i~~~t~lv~is~v~~~tG~~~~~  158 (376)
T d1eg5a_          81 VAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDS--RGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPV  158 (376)
T ss_dssp             HHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCT--TSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCH
T ss_pred             ccccccccCcccccccccchhhHHHHHHHHhcCCEEEEEcCCC--CCeECHHHHHHhcCCCceEEEEECCccccceeeee
Confidence            3    467889999888887765544   45599999998764  45799999999999999999999999999999887


Q ss_pred             HHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEE
Q 019298          193 QHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWF  257 (343)
Q Consensus       193 ~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i  257 (343)
                      +++.++++. ...+.++++|.++....    .+..+   ...+..++++|++|.+|.+|.++.|+
T Consensus       159 ~~i~~~~~~-~~~~~~~~vD~~q~~g~----~~~d~---~~~~~D~~~~s~~K~~gp~G~~~l~~  215 (376)
T d1eg5a_         159 EDVTRIVKK-KNKETLVHVDAVQTIGK----IPFSL---EKLEVDYASFSAHKFHGPKGVGITYI  215 (376)
T ss_dssp             HHHHHHHHH-HCTTCEEEEECTTTTTT----SCCCC---TTTCCSEEEEEGGGGTSCTTCEEEEE
T ss_pred             hhhhhhhhh-cccCceeEEEeeecccc----ccccc---cccCccceecccceeecCCCceeEEe
Confidence            776666552 34489999999987632    22222   22234489999999998888766664

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

Probab=99.74  E-value=3e-17  Score=143.63  Aligned_cols=273  Identities=14%  Similarity=0.098  Sum_probs=167.5

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEe
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLP  130 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~  130 (343)
                      .+++|++++++.++.... ...|++....+++|+.+++++      +..+++|++|+|+++++..++..+.++++.+++.
T Consensus        10 ~g~~P~v~eAl~~~~~~~-~~~y~~~~~~~~lr~~ia~~~------g~~~~~v~~tsggtean~~a~~~~~~~~~~~~~~   82 (340)
T d1svva_          10 VGMHPKILDLMARDNMTQ-HAGYGQDSHCAKAARLIGELL------ERPDADVHFISGGTQTNLIACSLALRPWEAVIAT   82 (340)
T ss_dssp             SCCCHHHHHHHHHHTTCC-CCSTTCSHHHHHHHHHHHHHH------TCTTSEEEEESCHHHHHHHHHHHHCCTTEEEEEE
T ss_pred             CCCCHHHHHHHHHHhhcC-CCCCCCCHHHHHHHHHHHHHh------CCCcceEEEcCCHHHHHHHHHHHHhhhccccccc
Confidence            567899999999876543 456877677788999999999      5677899999999999999999999999999999


Q ss_pred             CCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc------CCceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298          131 RPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD------QNTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (343)
Q Consensus       131 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~------~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~  204 (343)
                      .+.+..+.......+............. ..+.+.......      ..+..++++.+.|++|.+...+++..+.+.|.+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (340)
T d1svva_          83 QLGHISTHETGAIEATGHKVVTAPCPDG-KLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQELEDISASCKE  161 (340)
T ss_dssp             TTSHHHHSSTTHHHHTTCCEEEECCTTS-CCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTSCCCCHHHHHHHHHHHHH
T ss_pred             cccceeeeecccccccceeeeecccccc-cccchhHHHHhhhhhcccCCcceeeeecccccccccccHHHhhhhhccccc
Confidence            9888655332222222222222222222 223333332221      134455666666667778888999999999999


Q ss_pred             cCcEEEEccCCCccccCCCC-CCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcccc
Q 019298          205 LKTLVIADEVYGHLVFGDKP-FVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILG  283 (343)
Q Consensus       205 ~~~~~i~D~ay~~~~~~~~~-~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~  283 (343)
                      ++.++++|++|......... ........ ....+...+..|.  ..+.+.++....... .    ..............
T Consensus       162 ~g~~~~~d~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~  233 (340)
T d1svva_         162 HGLYLFLDGARLASALSSPVNDLTLADIA-RLTDMFYIGATKA--GGMFGEALIILNDAL-K----PNARHLIKQRGALM  233 (340)
T ss_dssp             HTCEEEEECTTHHHHHTSTTCCCCHHHHH-HHCSEEEEECTTT--TCSSCEEEEECSGGG-C----TTHHHHHHHTTCCC
T ss_pred             ccceeeeeccceeeeeccccccccccccc-ccceeeecCCccc--cccccccccccchhh-h----hhhhhhcccccCcc
Confidence            99999999999864433221 11111111 1123445555555  344445555543211 0    01111111111111


Q ss_pred             CcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298          284 DPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD  342 (343)
Q Consensus       284 ~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~  342 (343)
                      .......+++ ...+.. ..+....++..+++..+.+.|+.+ |+.+..|.+++++|++
T Consensus       234 ~~~~~~~aa~-~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~p~~~~~v~~~  289 (340)
T d1svva_         234 AKGWLLGIQF-EVLMKD-NLFFELGAHSNKMAAILKAGLEAC-GIRLAWPSASNQLFPI  289 (340)
T ss_dssp             TTTHHHHHHH-HHHTST-THHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCCSSSEECBE
T ss_pred             chhhHHHHHH-HHHhhh-hHHHHHHHHHHHHHhhhHHHHhcC-CCeeecCCCceEEEEe
Confidence            2222223333 333332 344447777888888888888887 8887788889998875

>d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Escherichia coli [TaxId: 562]

Probab=99.74  E-value=3.4e-16  Score=139.82  Aligned_cols=219  Identities=10%  Similarity=0.038  Sum_probs=158.8

Q ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHh----cCceeEEeec
Q 019298           78 GLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAF----RHIEVRHFDL  153 (343)
Q Consensus        78 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~----~g~~~~~~~~  153 (343)
                      ....|++.++++-        ..+..+++++++.|+..++.+++++||+|++....|.+....+..    .|.++..++.
T Consensus        59 t~~~le~~la~LE--------g~~~a~~~~SGMaAi~~~l~~l~~~Gd~iv~~~~~Yg~T~~l~~~~l~~~Gi~~~~~d~  130 (391)
T d1cl1a_          59 THFSLQQAMCELE--------GGAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDP  130 (391)
T ss_dssp             HHHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECT
T ss_pred             hHHHHHHHHHHHh--------CCccEEEeccccceeeehhhcccCCCCeEEEecccccchhhhhhhcccccccccccccC
Confidence            3456778888876        457899999999999999999999999999999999887666543    4666666642


Q ss_pred             CCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhh--cCcEEEEccCCCccccCCCCCCccccc
Q 019298          154 LPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK--LKTLVIADEVYGHLVFGDKPFVPMGVF  231 (343)
Q Consensus       154 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~--~~~~~i~D~ay~~~~~~~~~~~~~~~~  231 (343)
                             .|.+.+++++++++++|++.+|.||+..+.+   +++++++|++  +|+++++|+.++....-    .++ .+
T Consensus       131 -------~d~~~~~~~i~~~t~~i~~EtpsNP~l~v~D---i~~i~~~a~~~~~g~~~vVDnT~atP~~~----~Pl-~~  195 (391)
T d1cl1a_         131 -------LIGADIVKHLQPNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVLF----KAL-DF  195 (391)
T ss_dssp             -------TCGGGGGGTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTSS----CGG-GG
T ss_pred             -------ccccccccccccccceeeecccCcccccccc---cHHHHHHHHhccCCcEEEEeccccchhhh----ccc-cc
Confidence                   3678899999999999999999999999965   5666666655  59999999999863311    122 12


Q ss_pred             CCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc-cccCcchHHHHHHHhccchhhHHHHHHHHH
Q 019298          232 GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD-ILGDPATFIQVCIMYGCLSTIMQIMIHGNF  310 (343)
Q Consensus       232 ~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~  310 (343)
                      +   -.|++.|.+|.++..|.-+|-+++.++       ++.+++..... .....++.....+ ..   ....+..+.++
T Consensus       196 G---aDivvhS~TKy~~GhsdvlgG~vv~~~-------~~~~~~~~~~~~~G~~~~p~~a~ll-~r---gl~TL~lR~~~  261 (391)
T d1cl1a_         196 G---IDVSIQAATKYLVGHSDAMIGTAVCNA-------RCWEQLRENAYLMGQMVDADTAYIT-SR---GLRTLGVRLRQ  261 (391)
T ss_dssp             T---CSEEEEETTTTTTCSSSCCCEEEEECT-------TTHHHHHHHHHHTTCCCCHHHHHHH-HH---HHTTHHHHHHH
T ss_pred             c---cceEEeecchhccccccccccceeccc-------cccccchhhhhcccccCCchhhhhh-hc---cchhHHHHHHH
Confidence            2   239999999999998866666555543       34444444432 2345566655555 11   11223338888


Q ss_pred             HHHHHHHHHHhhcCCCCce-eeCC
Q 019298          311 LENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       311 ~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      ..++...+.+.|+++|.+. ++.|
T Consensus       262 ~~~nA~~vA~~L~~hp~V~~V~yP  285 (391)
T d1cl1a_         262 HHESSLKVAEWLAEHPQVARVNHP  285 (391)
T ss_dssp             HHHHHHHHHHHHHTCTTEEEEECT
T ss_pred             HHHHHHHHHHHHHhcccccccccc
Confidence            8899999999999988777 5554

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

Probab=99.74  E-value=1.7e-16  Score=139.89  Aligned_cols=283  Identities=10%  Similarity=0.025  Sum_probs=177.1

Q ss_pred             cceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHH
Q 019298           35 KKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAID  114 (343)
Q Consensus        35 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~  114 (343)
                      ++.++|+...     ..+.+|+++++|+++... ....|.+.....++|+.++++++       .+..+++|+|+++++.
T Consensus         2 ~~~~~f~s~n-----~~g~~P~v~~A~~~a~~~-~~~~~~~~~~~~~l~~~la~~~g-------~~~~v~f~~sGt~An~   68 (345)
T d1v72a1           2 PPALGFSSDN-----IAGASPEVAQALVKHSSG-QAGPYGTDELTAQVKRKFCEIFE-------RDVEVFLVPTGTAANA   68 (345)
T ss_dssp             CCCCBCSCGG-----GCCCCHHHHHHHHHTTSS-CCCSTTCSHHHHHHHHHHHHHHT-------SCCEEEEESCHHHHHH
T ss_pred             CCCcCcCCCC-----CCCCCHHHHHHHHHHhcc-CccccCCCHHHHHHHHHHHHHHC-------CCcEEEECCchHHHHH
Confidence            4567888644     256799999999987543 34567766677889999999984       2457899999999999


Q ss_pred             HHHHHhcCCCCeEEEeCCCCcchH---HHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCC------ce-EEEEeCCCC
Q 019298          115 VAMALLSRPGANILLPRPGFPIYE---LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN------TV-ALVIINPGN  184 (343)
Q Consensus       115 ~~~~~l~~~gd~vl~~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~-~i~~~~p~n  184 (343)
                      .++..++.+++.+++....+....   ......+..+..+.  ...+...+++.++..+.+.      +. .++.+.+.|
T Consensus        69 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  146 (345)
T d1v72a1          69 LCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTV--DGPAAKLDIVRLRERTREKVGDVHTTQPACVSITQAT  146 (345)
T ss_dssp             HHHHTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEEC--CCGGGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSC
T ss_pred             HHHHHHHhcCCccccccccceeeechhhHHHhcCccccccc--ccccccccHHHhhhhhcccccccccccceeeeeeccc
Confidence            999999888888887777764432   23344455554443  3345568999999887652      22 345567788


Q ss_pred             CcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCC
Q 019298          185 PCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG  264 (343)
Q Consensus       185 ptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~  264 (343)
                      +.|...+.++++++.++|++||+++++|+++..........................+..|..+..+   +........ 
T Consensus       147 ~~~~~~~~~~~~~i~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-  222 (345)
T d1v72a1         147 EVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKNGVLAA---EAIVLFNTS-  222 (345)
T ss_dssp             TTSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGGTCSSC---EEEEESSGG-
T ss_pred             cccccccchhhhhHHHHHHhcCceeeecccccceeccccccCHHHhhccccccccccCccccccccc---cccccchhh-
Confidence            9999999999999999999999999999999865433211111000111112244445555522222   333332211 


Q ss_pred             CCCchHHHHHHhhh-hccccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298          265 MFRKPKVVERMKKY-FDILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD  342 (343)
Q Consensus       265 ~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~  342 (343)
                           ......... .............+.....+.+ ..+.+...+..++...+.+.+.+++|+.+..|.+++++|++
T Consensus       223 -----~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~p~~~niv~~~  295 (345)
T d1v72a1         223 -----LATEMSYRRKRAGHLSSKMRFLSAQIDAYLTD-DLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCR  295 (345)
T ss_dssp             -----GHHHHHHHHHHTTCCCSSTHHHHHHHHHHTST-THHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEE
T ss_pred             -----hhhhccccccccccccchhhHHhhhhHHHHHH-hhhhhhccchhhHHHHHHHHHHhcCCcEeccCCCccEEEEE
Confidence                 111111111 1112222222222221222222 33344566666777778888899999998889889998876

>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase)
species: Amycolatopsis mediterranei [TaxId: 33910]

Probab=99.74  E-value=2.9e-16  Score=141.63  Aligned_cols=243  Identities=13%  Similarity=0.106  Sum_probs=167.0

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeC
Q 019298           53 TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPR  131 (343)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~  131 (343)
                      ...+-++++.+.++.+.+. +....-...|++.+|+++        ...+++.+++++.|+.++++++ +++||+|+++.
T Consensus        11 ~~~~~~~~~~~~l~~g~~~-~~~g~~v~~fE~~~a~~~--------g~~~~v~~~SGt~Al~lal~~l~~~~gdeVi~p~   81 (384)
T d1b9ha_          11 YDDAERNGLVRALEQGQWW-RMGGDEVNSFEREFAAHH--------GAAHALAVTNGTHALELALQVMGVGPGTEVIVPA   81 (384)
T ss_dssp             CCHHHHHHHHHHHHTSCCB-TTTCSHHHHHHHHHHHHT--------TCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEES
T ss_pred             CCHHHHHHHHHHHHcCCee-ecCCHHHHHHHHHHHHHH--------CcCeEEEeCCHHHHHHHHHHHcCCCCCCEEEEec
Confidence            4456677888888865421 122234688999999998        4568899999999999999998 68999999999


Q ss_pred             CCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEE
Q 019298          132 PGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIA  211 (343)
Q Consensus       132 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~  211 (343)
                      .+|......+...|.+++.++.++ ..+.+|++.+++.+..++++|+   +.+..|..   .++.++.++|+++++++|+
T Consensus        82 ~t~~a~~~ai~~~g~~p~~~d~~~-~~~~~d~~~~~~~i~~~tk~i~---~~~~~g~~---~d~~~i~~~~~~~~i~lie  154 (384)
T d1b9ha_          82 FTFISSSQAAQRLGAVTVPVDVDA-ATYNLDPEAVAAAVTPRTKVIM---PVHMAGLM---ADMDALAKISADTGVPLLQ  154 (384)
T ss_dssp             SSCTHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEEC---CBCGGGCC---CCHHHHHHHHHHHTCCBCE
T ss_pred             cccccccccccccccccccccccc-cccccchhhhcccccccccccc---cccccccc---cccccchhhhhhhhhhhhh
Confidence            999999999999999999998865 4568999999999988888876   45666666   4577888899999999999


Q ss_pred             ccCCCcccc-CCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc---------
Q 019298          212 DEVYGHLVF-GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI---------  281 (343)
Q Consensus       212 D~ay~~~~~-~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~---------  281 (343)
                      |.+++.... .+..   +..++.  -.++-.+.+|.++.  -..|.+++.++       ++.++++..+..         
T Consensus       155 D~a~a~ga~~~g~~---~g~~g~--~~~~Sf~~~K~i~~--g~GG~i~t~~~-------~~~~~~~~~~~~g~~~~~~~~  220 (384)
T d1b9ha_         155 DAAHAHGARWQGKR---VGELDS--IATFSFQNGKLMTA--GEGGAVVFPDG-------ETEKYETAFLRHSCGRPRDDR  220 (384)
T ss_dssp             ECTTCTTCEETTEE---GGGSSS--CEEEECCTTSSSCS--SSCEEEEECTT-------CHHHHHHHHHHTBTTCCTTCS
T ss_pred             hhceecccccCCEe---cCcccc--cceecccccccccc--cccchhhhhhH-------HHHHHHHHHHhcCCCCccccc
Confidence            999987532 2222   222222  12333445777543  33577777654       355555544210         


Q ss_pred             ---------ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce
Q 019298          282 ---------LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI  329 (343)
Q Consensus       282 ---------~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~  329 (343)
                               ....+.+ |+++....|....+++   ++-+++.+.+.+.|..++++.
T Consensus       221 ~~~~~~~G~n~rms~l-~Aaig~~qL~~ld~~~---~~R~~~~~~y~~~L~~~~~i~  273 (384)
T d1b9ha_         221 RYFHKIAGSNMRLNEF-SASVLRAQLARLDEQI---AVRDERWTLLSRLLGAIDGVV  273 (384)
T ss_dssp             SCCCCSCCCBCBCBHH-HHHHHHHHHTTHHHHH---HHHHHHHHHHHHHHHTSTTCE
T ss_pred             cccccccccccccccc-hhhhhhhhhhhcccch---hhhhhhhhhhhhhhhcccccc
Confidence                     1123333 4444244444433333   344456666677777776654

>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL2 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL2 [TaxId: 5722]

Probab=99.73  E-value=1e-16  Score=140.39  Aligned_cols=216  Identities=15%  Similarity=0.121  Sum_probs=158.4

Q ss_pred             HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH----HHhcCceeEEeecCCC
Q 019298           81 LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----AAFRHIEVRHFDLLPD  156 (343)
Q Consensus        81 ~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----~~~~g~~~~~~~~~~~  156 (343)
                      .|++.+|++-        ..+..+++++++.|+..++.+++++||+|++..+.|.+....    ....|.++.+++.   
T Consensus         2 aLE~~la~Le--------g~~~a~~~sSGMaAi~~~l~~ll~~Gd~iv~~~~~Yg~t~~~~~~~l~~~gi~~~~~d~---   70 (331)
T d1pffa_           2 ALEGKIAKLE--------HAEACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM---   70 (331)
T ss_dssp             HHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT---
T ss_pred             HHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHhcCeEEEEecc---
Confidence            5788898887        467889999999999999999999999999999999775443    4567888888754   


Q ss_pred             CCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHH-hhcCcEEEEccCCCccccCCCCCCcccccCCCC
Q 019298          157 KGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETA-NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV  235 (343)
Q Consensus       157 ~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~-~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~  235 (343)
                          -|.+.++++++++++.|++.+|.||+..+.+   ++++++++ +++++++|+|..++....-.    ++ .++   
T Consensus        71 ----~d~~~~~~~i~~~t~~i~~Es~~np~~~v~d---~~~~~~~~a~~~~~~~vVDnT~atp~~~~----pl-~~G---  135 (331)
T d1pffa_          71 ----AVPGNIEKHLKPNTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILTN----PL-DLG---  135 (331)
T ss_dssp             ----TSTTHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHCC----GG-GGT---
T ss_pred             ----cchhhHhhhcccccceeeeeccccccccccc---chhhhhhhhcccCceEEeecccccccccc----cc-ccC---
Confidence                2688999999999999999999999999955   55566654 67899999999998533211    11 122   


Q ss_pred             CEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHh--hhhcc-ccCcchHHHHHHHhccchhhHHHHHHHHHHH
Q 019298          236 PILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK--KYFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGNFLE  312 (343)
Q Consensus       236 ~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~--~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~  312 (343)
                      -.|++.|.+|.++..|.-+|.+++.+       ++...+.+  ..... ....++.....+..+    ...+-.+.++..
T Consensus       136 aDiVv~S~TKy~~Gh~d~~~G~v~~~-------~~~~~~~~~~~~~~~~G~~l~p~~a~ll~rg----l~Tl~~Rm~~~~  204 (331)
T d1pffa_         136 VDIVVHSATKYINGHTDVVAGLVCSR-------ADIIAKVKSQGIKDITGAIISPHDAWLITRG----TLTLDMRVKRAA  204 (331)
T ss_dssp             CSEEEEETTTTTSSSSSCCCEEEEEC-------HHHHHHHHHTCCCCCCCCCCCHHHHHHHHHH----HHHHHHHHHHHH
T ss_pred             CCEEEecchhhcCCCCcccccccccc-------ccchhhhhhhhhhhccCCCCCHHHHHHHHHH----HHHHHHHHHHHH
Confidence            23999999999999886666655543       23333332  23333 445666666555111    122223888899


Q ss_pred             HHHHHHHHhhcCCCCce-eeCC
Q 019298          313 NFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       313 ~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      ++...+.+.|+++|.+. ++.|
T Consensus       205 ~nA~~lA~~L~~hp~V~~V~yP  226 (331)
T d1pffa_         205 ENAQKVAEFLHEHKAVKKVYYP  226 (331)
T ss_dssp             HHHHHHHHHHHHCTTCCCEECT
T ss_pred             HHHHHHHHhhhhCCcEEeeccc
Confidence            99999999999988876 5554

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

Probab=99.73  E-value=1.6e-16  Score=146.02  Aligned_cols=278  Identities=13%  Similarity=0.052  Sum_probs=175.6

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHH
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAI  113 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al  113 (343)
                      ..-.|||-.....    .+..+.+..++   ...+  ..|...+...+|++.+++++        ..+.++++++++.|+
T Consensus        41 ~~v~iDl~sDs~t----~am~~~~~aa~---~~GD--d~Y~~dpt~~~lE~~~a~l~--------G~e~al~~~SGt~An  103 (456)
T d1c7ga_          41 KDIYIDLLTDSGT----NAMSDKQWAGM---MIGD--EAYAGSENFYHLEKTVKELF--------GFKHIVPTHQGRGAE  103 (456)
T ss_dssp             GGCSEECSCSSSC----CCEEHHHHHHT---TSCC--CCSSSCHHHHHHHHHHHHHH--------CCSEEEEESSHHHHH
T ss_pred             cceeeEcccCCCc----ccchHHHHHHH---hccc--hhccCCchHHHHHHHHHHHh--------CCCeEEECCCHHHHH
Confidence            4556788665532    22344443322   1222  25887777889999999999        567899999999999


Q ss_pred             HHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCC--------CCCCCCCHHHHHhhhcC----CceEEEEeC
Q 019298          114 DVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP--------DKGWEVDLDDIESLADQ----NTVALVIIN  181 (343)
Q Consensus       114 ~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~d~~~l~~~~~~----~~~~i~~~~  181 (343)
                      ..++++++++||.|+.....+ .........|.....+....        ...+.+|+++|++.+++    .+..+++.+
T Consensus       104 ~~a~~~l~~~Gd~Vi~~~~f~-~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~I~~~~~~~~~~i~~e~  182 (456)
T d1c7ga_         104 NLLSQLAIKPGQYVAGNMYFT-TTRFHQEKNGATFVDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAENIAYICLAV  182 (456)
T ss_dssp             HHHHHHHCCTTEEEEESSCCH-HHHHHHHHTTEEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEES
T ss_pred             HHHHHHhcCCCCeEecCcchH-HHHHHHHHcCceeeeccccccccccccCCccccCCHHHHHHHhhhcCCccceeEEeee
Confidence            999999999999998776533 34444566777766554321        23457899999998864    345778899


Q ss_pred             CCCCc-ccccCHHHHHHHHHHHhhcCcEEEEccCCCccc----------cCCCCCCcc-cccCCCCCEEEEccCccccCC
Q 019298          182 PGNPC-GNVYSYQHLQKLAETANKLKTLVIADEVYGHLV----------FGDKPFVPM-GVFGSTVPILTLGSLSKRWIV  249 (343)
Q Consensus       182 p~npt-G~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~----------~~~~~~~~~-~~~~~~~~~i~~~S~sK~~~~  249 (343)
                      ++|+. |++++.++++++.++|++||+.+++|+++....          +.+.....+ ...... -.++..|++|.++.
T Consensus       183 ~~n~~gG~~~~~~~l~~i~~~a~~~~~~~~~D~a~~~~~a~~~~~~~~~~~~~~i~~i~~~~~~~-ad~~s~s~~K~~~~  261 (456)
T d1c7ga_         183 TVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSY-ADGCTMSGKKDCLV  261 (456)
T ss_dssp             SBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTT-CSEEEEETTTTTCC
T ss_pred             cccccccceecHHHHHHHHHHHHHcCCEEEEEcchhhcchhhhcccccccCCCChhhhccccccc-cccEEEeccccccc
Confidence            98875 688999999999999999999999999975311          111111000 000011 11667799999766


Q ss_pred             CCCcEEEEEEeCCCCCCCchHHHHHHhhhh---c---cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhc
Q 019298          250 PGWRLGWFVTTDPCGMFRKPKVVERMKKYF---D---ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYK  323 (343)
Q Consensus       250 ~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~---~---~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~  323 (343)
                      ++  .|++++.+       .++.++++...   .   ..+..+.....++ ...+.+... .+..++..++.+++.+.|.
T Consensus       262 ~~--GG~i~~~~-------~~l~~~~r~~~~~~~g~~~~g~~~~~~~~a~-a~~l~e~~~-~~~l~~r~~~~~~L~e~L~  330 (456)
T d1c7ga_         262 NI--GGFLCMND-------EEMFSAAKELVVVYEGMPSYGGLAGRDMEAM-AIGLREAMQ-YEYIEHRVKQVRYLGDKLR  330 (456)
T ss_dssp             SS--CEEEEESC-------HHHHHHHHHHHHHHTCCTTTTTCCHHHHHHH-HHHHHHHTC-HHHHHHHHHHHHHHHHHHH
T ss_pred             cc--eeEEEcCC-------HHHHHHHHHhccccCCCcccchhhHHHHHHH-HHHHHHhcC-HHHHHHHHHHHHHHHHHHH
Confidence            53  36666643       45767666542   1   1222233222222 111111111 1133333455577788888


Q ss_pred             CCCCceeeCCCCceEeeec
Q 019298          324 LIPELINFKSTGSSLKYLD  342 (343)
Q Consensus       324 ~~~g~~~~~~~~g~~~~~~  342 (343)
                      +. |+.+..|.+++.++++
T Consensus       331 ~~-g~~vv~p~g~~~v~vd  348 (456)
T d1c7ga_         331 EA-GVPIVEPTGGHAVFLD  348 (456)
T ss_dssp             HT-TCCBCSSCCSSEEEEE
T ss_pred             hc-cCCcccCCCCcceeEe
Confidence            87 7887788888887764

>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Probable cysteine desulfurase SufS
species: Synechocystis sp. PCC 6803 [TaxId: 1148]

Probab=99.70  E-value=2.7e-15  Score=136.40  Aligned_cols=263  Identities=16%  Similarity=0.219  Sum_probs=178.2

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCC----------CHHHHHHHHHHHhhhCCCCCC-CCc
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAG----------LPLTRRAIAEYLSRDLPYKLT-PND  102 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g----------~~~lr~~ia~~~~~~~~~~~~-~~~  102 (343)
                      +++.|-|+.+..     .+.++.+.+++.+.+.+...+  +....          .++.|+.+++++      +.+ ++.
T Consensus        20 ~~~~iYld~a~~-----~~~p~~v~~~~~~~~~~~~~n--~~s~~~~~~~~~~~~~e~aR~~ia~ll------ga~~~~~   86 (408)
T d1t3ia_          20 GHPLVYLDNAAT-----SQKPRAVLEKLMHYYENDNAN--VHRGAHQLSVRATDAYEAVRNKVAKFI------NARSPRE   86 (408)
T ss_dssp             TEECEECBTTTC-----CCCCHHHHHHHHHHHHHTCCC--C--CCSHHHHHHHHHHHHHHHHHHHHT------TCSCGGG
T ss_pred             CCCeEEeeCccc-----cCCCHHHHHHHHHHHHhcCCC--CCchhhHHHHHHHHHHHHHHHHHHHHh------CCCCccc
Confidence            556788988872     357889999998887653211  11111          235788888888      455 578


Q ss_pred             EEEecChHHHHHHHHHHh----cCCCCeEEEeCCCCcchHH----HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCc
Q 019298          103 VFVTSGCTQAIDVAMALL----SRPGANILLPRPGFPIYEL----SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNT  174 (343)
Q Consensus       103 i~~~~g~~~al~~~~~~l----~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~  174 (343)
                      +++++++++++..++..+    .++|++|++.+-.|++...    .++..|..+..++...  ....+.+.+++.+++++
T Consensus        87 i~~~~~tt~~~n~~~~~~~~~~~~~g~~il~s~~e~~s~~~~~~~~~~~~g~~v~~~~~~~--~~~~~~~~l~~~~~~~t  164 (408)
T d1t3ia_          87 IVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDE--QESFDLEHFKTLLSEKT  164 (408)
T ss_dssp             EEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCT--TSSBCHHHHHHHCCTTE
T ss_pred             EEeecchHHHHHHHHhhccccccCCCCEEEeecccchhhhhhhhhhhhccCceEeeeeccc--cccccHHHhhhccCCCc
Confidence            899999999998887663    4689999999999976543    4455688988887654  34578999999999999


Q ss_pred             eEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE
Q 019298          175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL  254 (343)
Q Consensus       175 ~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~  254 (343)
                      ++|+++..+|-||..++.   ++|.++|+++|+++++|.+++.    +..+..+..++-   .+++.|.+|.+|.+|  +
T Consensus       165 ~lv~i~~~~~~tG~~~p~---~~i~~~~~~~g~~~ivDa~q~~----g~~~id~~~~~~---D~~~~s~hK~~gp~G--~  232 (408)
T d1t3ia_         165 KLVTVVHISNTLGCVNPA---EEIAQLAHQAGAKVLVDACQSA----PHYPLDVQLIDC---DWLVASGHKMCAPTG--I  232 (408)
T ss_dssp             EEEEEESBCTTTCBBCCH---HHHHHHHHHTTCEEEEECTTTT----TTSCCCHHHHTC---SEEEEEGGGTTSCTT--C
T ss_pred             eEEEEecccccccccCcH---HHHhhhhhccCceeeeccceec----ccccccccccCC---ceEEeccccccCCCC--c
Confidence            999999999999999774   6678888999999999999987    222233333333   389999999876666  6


Q ss_pred             EEEEEeCCCCCCCchHHHHHHhhhh---------------------cc-ccCcchHHHHHHHhccchhhHHH-HH-HHHH
Q 019298          255 GWFVTTDPCGMFRKPKVVERMKKYF---------------------DI-LGDPATFIQVCIMYGCLSTIMQI-MI-HGNF  310 (343)
Q Consensus       255 G~i~~~~~~~~~~~~~~~~~l~~~~---------------------~~-~~~~~~~~~~a~~~~~l~~~~~~-l~-~~~~  310 (343)
                      |++...+        +....+....                     .. .+..+.....++ ..+++-..++ ++ .+++
T Consensus       233 g~l~v~~--------~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~~l-~~al~~~~~~g~~~i~~~  303 (408)
T d1t3ia_         233 GFLYGKE--------EILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIAL-GAAVDYLTDLGMENIHNY  303 (408)
T ss_dssp             EEEEECH--------HHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHH-HHHHHHHHHHCHHHHHHH
T ss_pred             cccccch--------hhhhcCCceecCCcccccccccccccCCchhhhcCCcHHHHHHHHH-HHHHHHHHHcCHHHHHHH
Confidence            7777742        3443332110                     00 223333333333 3333211111 11 5566


Q ss_pred             HHHHHHHHHHhhcCCCCceeeC
Q 019298          311 LENFAGSCVPSYKLIPELINFK  332 (343)
Q Consensus       311 ~~~~~~~~~~~L~~~~g~~~~~  332 (343)
                      ..+..+.+.+.+...+++.+..
T Consensus       304 ~~~l~~~l~~~~~~~~~~~~~~  325 (408)
T d1t3ia_         304 EVELTHYLWQGLGQIPQLRLYG  325 (408)
T ss_dssp             HHHHHHHHHHHHHTCTTEEEES
T ss_pred             HHHHHhHHhhhhccCccccccC
Confidence            6777888888888887776543

>d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL1 [TaxId: 5722]

Probab=99.70  E-value=2.3e-15  Score=134.49  Aligned_cols=218  Identities=15%  Similarity=0.112  Sum_probs=157.4

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH----HHHhcCceeEEeecC
Q 019298           79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYEL----SAAFRHIEVRHFDLL  154 (343)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~~~  154 (343)
                      ...|++.++++-        ..+..+++++++.|+..++.+++++||.|++.+..|.+...    .....|..+..++. 
T Consensus        61 ~~~le~~la~LE--------g~~~a~~~sSGmaAi~~~~l~l~~~gd~vv~~~~~yg~t~~~~~~~~~~~gi~~~~~d~-  131 (394)
T d1e5ea_          61 VSNLEGKIAFLE--------KTEACVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINT-  131 (394)
T ss_dssp             HHHHHHHHHHHH--------TCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT-
T ss_pred             HHHHHHHHHHHh--------CCcceeeeccchHHHHHHHHhhcccccccccccceeehhhHhHHHHhhccceeeeccCC-
Confidence            356778888776        45788899999999999999999999999999999976544    34556888888754 


Q ss_pred             CCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHh-hcCcEEEEccCCCccccCCCCCCcccccCC
Q 019298          155 PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETAN-KLKTLVIADEVYGHLVFGDKPFVPMGVFGS  233 (343)
Q Consensus       155 ~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~-~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~  233 (343)
                            -|.+++++++++++++|++.+|.||+..+.+   ++++++.++ ++++++|+|..++....-    .++ .++ 
T Consensus       132 ------~d~~~~~~~i~~~t~lv~~Etp~NP~l~v~D---i~~~~~~~~~~~g~~vvvDnT~atP~~~----~Pl-~~G-  196 (394)
T d1e5ea_         132 ------AIPGEVKKHMKPNTKIVYFETPANPTLKIID---MERVCKDAHSQEGVLVIADNTFCSPMIT----NPV-DFG-  196 (394)
T ss_dssp             ------TSTTHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTC----CGG-GGT-
T ss_pred             ------CCHHHHHHhhcccccEEEEeccCCcceeeeh---hhhhhhccccccCeEEEecCcccCcccC----Cch-hcC-
Confidence                  2578899999999999999999999999954   566666554 568999999999753211    111 222 


Q ss_pred             CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh--hhcc-ccCcchHHHHHHHhccchhhHHHHHHHHH
Q 019298          234 TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK--YFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGNF  310 (343)
Q Consensus       234 ~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~--~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~~  310 (343)
                        -.|+++|.+|.++..+.-+|.+++.+       .+.....+.  .+.. ....++.....+ ..-|   ..+--+.++
T Consensus       197 --aDiVvhS~TKy~~GhsDv~~G~v~~~-------~~~~~~~~~~~~~~~~G~~lsp~~a~ll-~rgl---~TL~lRm~r  263 (394)
T d1e5ea_         197 --VDVVVHSATKYINGHTDVVAGLICGK-------ADLLQQIRMVGIKDITGSVISPHDAWLI-TRGL---STLNIRMKA  263 (394)
T ss_dssp             --CSEEEEETTTTTTCSSCCCCEEEEEC-------HHHHHHHHHTCCCCCCCCCCCHHHHHHH-HHHH---TTHHHHHHH
T ss_pred             --CCEEEechhhhcCCCcccccccccch-------hhHHHHHHHHHHHHhhCCCCChHHHHHH-Hhhc---hhHHHHHHH
Confidence              23999999999999886666655543       345554432  3332 445676766555 1111   222228888


Q ss_pred             HHHHHHHHHHhhcCCCCce-eeCC
Q 019298          311 LENFAGSCVPSYKLIPELI-NFKS  333 (343)
Q Consensus       311 ~~~~~~~~~~~L~~~~g~~-~~~~  333 (343)
                      ..++...+.++|+.+|.+. |+.|
T Consensus       264 ~~~nA~~lA~~L~~hp~V~~V~yP  287 (394)
T d1e5ea_         264 ESENAMKVAEYLKSHPAVEKVYYP  287 (394)
T ss_dssp             HHHHHHHHHHHHHTCTTEEEEECT
T ss_pred             HHHHHHHHHHHHhhcCCccEEeCC
Confidence            8999999999999998876 5554

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

Probab=99.66  E-value=2.4e-16  Score=145.91  Aligned_cols=251  Identities=12%  Similarity=0.014  Sum_probs=154.8

Q ss_pred             CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCC-------CeEEEeCCCCcchHHHHHhc
Q 019298           72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPG-------ANILLPRPGFPIYELSAAFR  144 (343)
Q Consensus        72 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~g-------d~vl~~~p~~~~~~~~~~~~  144 (343)
                      .|....+..+|++.+++++        ..+++++++++++|...+++.++++|       ..++.....+..+.......
T Consensus        70 ~y~~~~~~~~le~~~a~l~--------g~~~~~~~~sGt~A~~~a~~~~~~~g~~~~~~~~~~i~~~~h~~t~~~~~~~~  141 (465)
T d1ax4a_          70 AYAGSRNYYDLKDKAKELF--------NYDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELN  141 (465)
T ss_dssp             CSSSCHHHHHHHHHHHHHH--------CCCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHHHHT
T ss_pred             hhccChHHHHHHHHHHHHH--------CCCEEEECCCcHHHHHHHHHHHHHHHHhcCCCCCeEEeccchhhhhHHHHHHc
Confidence            5887778889999999999        46899999999999999999986543       33556666666666667777


Q ss_pred             CceeEEeecC--------CCCCCCCCHHHHHhhhcC----CceEEEEeCCCCCc-ccccCHHHHHHHHHHHhhcCcEEEE
Q 019298          145 HIEVRHFDLL--------PDKGWEVDLDDIESLADQ----NTVALVIINPGNPC-GNVYSYQHLQKLAETANKLKTLVIA  211 (343)
Q Consensus       145 g~~~~~~~~~--------~~~~~~~d~~~l~~~~~~----~~~~i~~~~p~npt-G~~~~~~~l~~l~~~~~~~~~~~i~  211 (343)
                      |...+.....        ....+.+|++++++++++    .+..+++..++|.. |..++.++++++.++|++||+++|+
T Consensus       142 g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~~~~~~g~~l~~  221 (465)
T d1ax4a_         142 GCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVM  221 (465)
T ss_dssp             TCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred             CCeeecccccccCCCCCCCCccCccCHHHHHHHHHhhccccccceeeccccccCceecCCHHHHHHHHHHHHHcCCEEEE
Confidence            8777655321        223567899999998864    23445555556655 4668999999999999999999999


Q ss_pred             ccCCCcccc----------CCCCCCcc-cccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh--
Q 019298          212 DEVYGHLVF----------GDKPFVPM-GVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY--  278 (343)
Q Consensus       212 D~ay~~~~~----------~~~~~~~~-~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~--  278 (343)
                      |+++.....          .+.....+ ...... ..++..|.+|.  +.+.+.|++++++..      .+.......  
T Consensus       222 D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~d~~s~s~~k~--~~~~~~g~l~~~~~~------~~~~~~~~~~~  292 (465)
T d1ax4a_         222 DSARFCENAYFIKARDPKYKNATIKEVIFDMYKY-ADALTMSAKKD--PLLNIGGLVAIRDNE------EIFTLARQRCV  292 (465)
T ss_dssp             ECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGG-CSEEEEETTST--TCCSSCEEEEESSCH------HHHHHHHHHHH
T ss_pred             ECcchhhhhcccccccccccccchhhhccccccc-cceeEeecccC--cccccceeEeecchH------HHHHhhhcccc
Confidence            999864211          00000000 000000 11555566665  556667888886421      222222221  


Q ss_pred             -hc---cccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCceeeCCCCceEeeec
Q 019298          279 -FD---ILGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELINFKSTGSSLKYLD  342 (343)
Q Consensus       279 -~~---~~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~g~~~~~~  342 (343)
                       ..   ...........+. ...+.. ....+..++..++.+++.+.|++. |+.+..+.++++++++
T Consensus       293 ~~~~~~~~~~~~~~~~~a~-~~~~~e-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~v~~~~~~~~~~~  357 (465)
T d1ax4a_         293 PMEGFVTYGGLAGRDMAAM-VQGLEE-GTEEEYLHYRIGQVKYLGDRLREA-GIPIQYPTGGHAVFVD  357 (465)
T ss_dssp             HHTCSTTTTTCCHHHHHHH-HHHHHH-TTCHHHHHHHHHHHHHHHHHHHHT-TCCBCSSCCSSEEEEE
T ss_pred             ccccCCCcchhhHHHHHHH-hhhhHH-hhhHHHHHHHHHHHHHHHHHHHhh-cCccccCCCcceeeee
Confidence             11   1112222222222 111110 000114455556678888888887 7776678888777654

>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-lyase (CYS3)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.64  E-value=7e-15  Score=131.15  Aligned_cols=217  Identities=15%  Similarity=0.064  Sum_probs=149.4

Q ss_pred             CHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhc----CceeEEeecC
Q 019298           79 LPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFR----HIEVRHFDLL  154 (343)
Q Consensus        79 ~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~----g~~~~~~~~~  154 (343)
                      ...|++.++++-        ..+..+++++++.|+..++ .++.+||.|++....|++....+...    |..+..++  
T Consensus        57 ~~~lE~~la~LE--------~~~~a~~~sSGmaAi~~~l-~~l~~gd~iv~~~~~yg~t~~~~~~~l~~~gi~~~~~~--  125 (393)
T d1n8pa_          57 RENLERAVAALE--------NAQYGLAFSSGSATTATIL-QSLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTN--  125 (393)
T ss_dssp             HHHHHHHHHHHT--------TCSEEEEESCHHHHHHHHH-HTSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEES--
T ss_pred             HHHHHHHHHHHh--------CCceEEEecCchhHHHhhh-hcccCCCeeeeeeeecccchhhhhhhhhcccceeEEee--
Confidence            346777777775        3467778888899997665 66788999999999998877666543    55554442  


Q ss_pred             CCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHh----hcCcEEEEccCCCccccCCCCCCcccc
Q 019298          155 PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETAN----KLKTLVIADEVYGHLVFGDKPFVPMGV  230 (343)
Q Consensus       155 ~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~----~~~~~~i~D~ay~~~~~~~~~~~~~~~  230 (343)
                            .+.+++++++++++++|++.+|.||+..+.+   +++++++++    ++|+++|+|..++.....    .++ .
T Consensus       126 ------~~~~~~~~~i~~~t~lv~~EspsNP~l~v~D---i~~ia~~a~~~~~~~g~~lvVDnT~atP~~~----~Pl-~  191 (393)
T d1n8pa_         126 ------DLLNDLPQLIKENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS----NPL-N  191 (393)
T ss_dssp             ------SHHHHHHHHSCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC----CGG-G
T ss_pred             ------cchHHHHHHhhhhcceeEecCcchhhhhccc---hhhhhhhhhhhcccCCceEEEecCccCcccC----Cch-h
Confidence                  2467899999999999999999999999965   555555555    789999999999753211    111 1


Q ss_pred             cCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc-ccCcchHHHHHHHhccchhhHHHHHHHH
Q 019298          231 FGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI-LGDPATFIQVCIMYGCLSTIMQIMIHGN  309 (343)
Q Consensus       231 ~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~l~~~~  309 (343)
                      ++   -.|++.|.+|.++..|--+|-+++.+      +.++.++++..+.. ....++.....+ ..-|   ..+-.+.+
T Consensus       192 ~G---ADiVvhS~TKyi~GhsDv~~G~v~~~------~~~~~~~l~~~~~~~G~~~~p~~a~ll-~rgl---~Tl~lR~~  258 (393)
T d1n8pa_         192 FG---ADIVVHSATKYINGHSDVVLGVLATN------NKPLYERLQFLQNAIGAIPSPFDAWLT-HRGL---KTLHLRVR  258 (393)
T ss_dssp             GT---CSEEEEETTTTTTCSSCCCCEEEEES------CHHHHHHHHHHHHHHCCCCCHHHHHHH-HHHH---TTHHHHHH
T ss_pred             hC---CCEEEEccccccCCCCccccceeeec------chhHHHHHHHHHhhcCCCCChHHHHHH-HhCC---cchhhHHH
Confidence            22   23999999999999775555554433      23577777766543 445677655555 1111   22222778


Q ss_pred             HHHHHHHHHHHhhcCC-CCce-eeCC
Q 019298          310 FLENFAGSCVPSYKLI-PELI-NFKS  333 (343)
Q Consensus       310 ~~~~~~~~~~~~L~~~-~g~~-~~~~  333 (343)
                      +..++...+.++|+.. |.+. ++.|
T Consensus       259 ~~~~nA~~lA~~L~~~~~~V~~V~yP  284 (393)
T d1n8pa_         259 QAALSANKIAEFLAADKENVVAVNYP  284 (393)
T ss_dssp             HHHHHHHHHHHHHTSCTTTEEEEECT
T ss_pred             HHHHHHHHHHHHHHhccCcEEEEecc
Confidence            8888888999999764 5555 4443

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

Probab=99.62  E-value=7.8e-14  Score=127.64  Aligned_cols=303  Identities=11%  Similarity=-0.051  Sum_probs=195.6

Q ss_pred             CcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 019298           10 NTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEY   89 (343)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~   89 (343)
                      +|....+.......+.+...+.  +++..||.....     ...+|++.+.+.+.+..+. ..+...+...++++.+.++
T Consensus        30 ~p~~~~~~~~~~~~i~d~l~~d--g~~~~n~asf~~-----t~~~~~~~~l~~~~~~~N~-~~~~~~P~~~~lE~~~v~~  101 (450)
T d1pmma_          30 FPLHEMRDDVAFQIINDELYLD--GNARQNLATFCQ-----TWDDENVHKLMDLSINKNW-IDKEEYPQSAAIDLRCVNM  101 (450)
T ss_dssp             CCCSCCCHHHHHHHHHHHGGGS--CCGGGBCSCCSC-----CCCCHHHHHHHHHTTTCBT-TCTTTSHHHHHHHHHHHHH
T ss_pred             CCccCCCHHHHHHHHHHHhccC--CCcccccccccc-----CCCCHHHHHHHHHHHhcCC-CCcccCccHHHHHHHHHHH
Confidence            3444444444444455544432  444466665542     3356788888888877643 2444334567899999999


Q ss_pred             HhhhCCCCCCCC---cEEEecChHHHHHHHHHHhcC------------CCCeEEEeCCCCcchHHHHHhcCceeEEeecC
Q 019298           90 LSRDLPYKLTPN---DVFVTSGCTQAIDVAMALLSR------------PGANILLPRPGFPIYELSAAFRHIEVRHFDLL  154 (343)
Q Consensus        90 ~~~~~~~~~~~~---~i~~~~g~~~al~~~~~~l~~------------~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~  154 (343)
                      +.+.+|.+...+   .=.+|+|+|+++.+++.+...            ....+++....|.++...++..|++++.++.+
T Consensus       102 la~L~~~p~~~~~~~~G~~t~GgSeA~~~a~~aar~~~~~~~~~~g~~~~~~~~~~~~~H~s~~Kaa~~~gi~~~~v~~~  181 (450)
T d1pmma_         102 VADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMR  181 (450)
T ss_dssp             HHHHTTCCCCTTSCCSEEEESSHHHHHHHHHHHHHHHHHHHHHHHTCCCSCCEEEESSCCHHHHHHHHHTTCEEEECCCB
T ss_pred             HHHHhCCCccccCCCcCeeeCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCceEEecccHHHHHHHHHHcCCCceEeeec
Confidence            988888654322   248999999999998876521            12457778889999999999999999999887


Q ss_pred             CCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHH---HHhhcCcEEEEccCCCcccc--CCCCCCccc
Q 019298          155 PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAE---TANKLKTLVIADEVYGHLVF--GDKPFVPMG  229 (343)
Q Consensus       155 ~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~---~~~~~~~~~i~D~ay~~~~~--~~~~~~~~~  229 (343)
                      + .++.+|+++|++++++++.+|+.+.+++.||.+=+.+++.++++   .|+++|+++++|.||+++..  ......-. 
T Consensus       182 ~-~~~~~d~~~L~~~i~~~t~~Vv~t~gtt~tG~~dpv~~i~~i~~~~~~a~~~~i~lHVDAA~gG~~~p~~~~~~~~~-  259 (450)
T d1pmma_         182 P-GQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWD-  259 (450)
T ss_dssp             T-TBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCS-
T ss_pred             C-CCCcCcHHHHHHHhhhCceEEEeeeeeccCCCccccchhhHHHHHHHHHhccCcEEEeehhhccceeeeechhhhhh-
Confidence            5 45789999999999999999998999999999977766655544   46789999999999987542  11111111 


Q ss_pred             ccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhh--------hhc--cccCcchHHHHHHHhccch
Q 019298          230 VFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKK--------YFD--ILGDPATFIQVCIMYGCLS  299 (343)
Q Consensus       230 ~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~--------~~~--~~~~~~~~~~~a~~~~~l~  299 (343)
                       .....-..+..|.+|.+ +.-..+||+...++..+.      ..+..        ...  ...+-+....... ...+.
T Consensus       260 -~~~~~aDSi~~s~HK~~-~~p~g~g~l~~r~~~~~~------~~~~~~~~yl~~~~~~~~~~~sr~~~~~~~~-~~~l~  330 (450)
T d1pmma_         260 -FRLPRVKSISASGHKFG-LAPLGCGWVIWRDEEALP------QELVFNVDYLGGQIGTFAINFSRPAGQVIAQ-YYEFL  330 (450)
T ss_dssp             -TTSTTEEEEEEETTTTT-CCCSSCEEEEESSGGGSC------GGGCEEEEETTEEEEECCSCCSCBSHHHHHH-HHHHH
T ss_pred             -hcccceeEeecChhhcc-CCCCCeeEEEecChhhhh------hhcccccCcCCCCcCCCcccCccchHHHHHH-HHHHh
Confidence             11112247788999984 444558999987643211      11100        001  1111111211112 22221


Q ss_pred             h-h-HHHHHHHHHHHHHHHHHHHhhcCCCCceee
Q 019298          300 T-I-MQIMIHGNFLENFAGSCVPSYKLIPELINF  331 (343)
Q Consensus       300 ~-~-~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~  331 (343)
                      . . ..+.+..++..+..+++.+.|++++++++.
T Consensus       331 ~~G~~G~~~~~~~~~~la~~l~~~L~~~~~~el~  364 (450)
T d1pmma_         331 RLGREGYTKVQNASYQVAAYLADEIAKLGPYEFI  364 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTSCEEEE
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEE
Confidence            1 1 233347888888999999999999888754

>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase homolog WlaK (PglE, Cj1121c)
species: Campylobacter jejuni [TaxId: 197]

Probab=99.61  E-value=5.5e-14  Score=126.11  Aligned_cols=188  Identities=14%  Similarity=0.174  Sum_probs=136.0

Q ss_pred             HHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh-cCCCCeEEEeCCCCcc
Q 019298           58 TEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL-SRPGANILLPRPGFPI  136 (343)
Q Consensus        58 ~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~vl~~~p~~~~  136 (343)
                      .+++.+.++.+.+.+.++  -...|++.+++++        ....++.++++|.|+.++++++ .++||+|++|.-+|..
T Consensus         4 ~~~~~~~l~~~~~~~~G~--~~~~fE~~~~~~~--------~~~~~~~~~SgT~Al~lal~~l~~~~gdeVi~p~~t~~a   73 (374)
T d1o69a_           4 LKYIEEVFKSNYIAPLGE--FVNRFEQSVKDYS--------KSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIA   73 (374)
T ss_dssp             HHHHHHHHHHTTTSCTTH--HHHHHHHHHHHHH--------CCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGG
T ss_pred             HHHHHHHHhcCCcCCCCH--HHHHHHHHHHHHH--------CcCeEEEeCCHHHHHHHHHHHcCCCCcCEEEeCCcchHh
Confidence            356677776654444444  3689999999999        4468999999999999999998 6889999999999999


Q ss_pred             hHHHHHhcCceeEEeecCCCCCCCCCHHH--HHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccC
Q 019298          137 YELSAAFRHIEVRHFDLLPDKGWEVDLDD--IESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEV  214 (343)
Q Consensus       137 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~--l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~a  214 (343)
                      ....+...|++++.+++++. .+..+.+.  ++.....+++++++.+.   .|..   .+++++.++|+++|+++|+|.|
T Consensus        74 ~~~~~~~~g~~pv~~Di~~~-~~~~~~~~~~~~~~~~~~~~aii~~~~---~G~~---~d~~~i~~~~~~~~i~vIED~a  146 (374)
T d1o69a_          74 SVAPICYLKAKPVFIDCDET-YNIDVDLLKLAIKECEKKPKALILTHL---YGNA---AKMDEIVEICKENDIVLIEDAA  146 (374)
T ss_dssp             GTHHHHHTTCEEEEECBCTT-SSBCHHHHHHHHHHCSSCCCEEEEECG---GGCC---CCHHHHHHHHHHTTCEEEEECT
T ss_pred             hHHHHhhccceeEecccccc-cccccccccccchhccccccccccccc---ccch---hhhHHHHHHhhccCcchhhhhh
Confidence            99999999999999988743 22333333  33455667888886555   4444   4578888999999999999999


Q ss_pred             CCcccc-CCCCCCcccccCCCCCEEEEccCc--cccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh
Q 019298          215 YGHLVF-GDKPFVPMGVFGSTVPILTLGSLS--KRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY  278 (343)
Q Consensus       215 y~~~~~-~~~~~~~~~~~~~~~~~i~~~S~s--K~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~  278 (343)
                      ++.... .+..   +..+++    +.+.||.  |.++..|  .|.+++.+       .++.++++..
T Consensus       147 ~a~g~~~~~~~---~G~~gd----~~~fSf~~~K~l~tge--GG~i~tnn-------~~~~~~~~~~  197 (374)
T d1o69a_         147 EALGSFYKNKA---LGTFGE----FGVYSYNGNKIITTSG--GGMLIGKN-------KEKIEKARFY  197 (374)
T ss_dssp             TCTTCEETTEE---TTSSSS----EEEEECCTTSSSCCSS--CEEEEESC-------HHHHHHHHHH
T ss_pred             hhhcceECCee---cCCCCc----eEEEeccCcccccccc--ceeehhhh-------HHHHHhhccc
Confidence            987432 2221   222222    6777775  7755443  47777753       4677777655

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.56  E-value=2.1e-14  Score=131.86  Aligned_cols=187  Identities=13%  Similarity=0.104  Sum_probs=128.5

Q ss_pred             HHHHHHHHHHHhhhCCCCCCCCcEEEecChH-HHHHHHHHHh---cCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCC
Q 019298           80 PLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT-QAIDVAMALL---SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP  155 (343)
Q Consensus        80 ~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~-~al~~~~~~l---~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~  155 (343)
                      ..+...+.+++.+.+|.+.... .++++|++ .++..++.++   ..+++.|+++...|.++...+...|.+.+.++..+
T Consensus        93 ~~le~~~~~~~~~l~g~~~~~~-~~~~~~~t~~~~~~~l~a~~~~~~~~~~vi~~~~~H~s~~~a~~~~g~~~~~v~~~~  171 (445)
T d3bc8a1          93 NKITNSLVLNVIKLAGVHSVAS-CFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVL  171 (445)
T ss_dssp             HHHHHHHHHHHHHHHTCTTCCE-EEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEE
T ss_pred             HHHHHHHHHHHHHHhCCCcccC-ccccccchHHHHHHHHHHHHHhCCCCCEEEEcCcccHHHHHHHHHcCCeeEEEEeec
Confidence            3567777777766666444333 44555544 4554444444   35678999999999999999999999988886533


Q ss_pred             -CCCCCCCHHHHHhhhcC----CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCc-cc
Q 019298          156 -DKGWEVDLDDIESLADQ----NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVP-MG  229 (343)
Q Consensus       156 -~~~~~~d~~~l~~~~~~----~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~-~~  229 (343)
                       ++.+.+|+++|++++.+    ++.+|+++.|+|++|.+   +++++|+++|+++|+++++|+||+.+......... ..
T Consensus       172 ~~~~~~id~~~l~~~i~~~~~~~~~~v~~~~~~~~~G~~---~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~  248 (445)
T d3bc8a1         172 EGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVP---DRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGA  248 (445)
T ss_dssp             ETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHH
T ss_pred             cCcccccCHHHHHHHHHhccccCeEEEEEeCCCCCCeee---hhHHHHHHHHHHhCCcEEEEccchhhhhhccccchhcc
Confidence             35578999999998853    56788889999999999   67899999999999999999999864321111100 11


Q ss_pred             ccCCCCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhc
Q 019298          230 VFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFD  280 (343)
Q Consensus       230 ~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~  280 (343)
                      .+..  -.+++.|.+|.++.+. ..|+++..+       ..+.+.+.....
T Consensus       249 ~~~~--vd~~~~s~hK~~~~p~-g~~~l~~~~-------~~~~~~~~~~~~  289 (445)
T d3bc8a1         249 RVGR--IDAFVQSLDKNFMVPV-GGAIIAGFN-------EPFIQDISKMYP  289 (445)
T ss_dssp             HHSC--CCEEEEEHHHHHSCCS-SCEEEEESC-------HHHHHHHHHHSC
T ss_pred             CcCC--cceEEecCccccccCC-CCceeeeCC-------hHHHHHHHHHHh
Confidence            1111  1278889999866543 356666643       456666655543

>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Spore coat polysaccharide biosynthesis protein C
species: Helicobacter pylori [TaxId: 210]

Probab=99.55  E-value=3.6e-13  Score=120.56  Aligned_cols=238  Identities=18%  Similarity=0.121  Sum_probs=161.5

Q ss_pred             cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhc-CCC--CeEEEe
Q 019298           54 THVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLS-RPG--ANILLP  130 (343)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~~g--d~vl~~  130 (343)
                      .++-++++.+.++.+.+   ...+-...|++.+++++        +.++++.+++++.|+..+++++. .+|  ++|+++
T Consensus        11 ~~~~~~~v~~~l~~~~~---~~G~~v~~fE~~~~~~~--------g~k~ai~~~Sgt~Al~~al~al~~~~~~~~eVi~p   79 (371)
T d2fnua1          11 DKEDKKAVLEVLNSKQL---TQGKRSLLFEEALCEFL--------GVKHALVFNSATSALLTLYRNFSEFSADRNEIITT   79 (371)
T ss_dssp             CHHHHHHHHHHHTSSCC---SSSHHHHHHHHHHHHHH--------TCSEEEEESCHHHHHHHHHHHSSCCCTTSCEEEEC
T ss_pred             CHHHHHHHHHHHcCCCc---cCCHHHHHHHHHHHHHH--------CcCeEEEEecHHHHHHHHHHHhcccCCCCCeeecc
Confidence            35667788888876543   32234688999999999        45688999999999999999984 344  589999


Q ss_pred             CCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEE
Q 019298          131 RPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI  210 (343)
Q Consensus       131 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i  210 (343)
                      .-+|......+...|++++.++++++.  .++.+.+++.+..++++|++++   ..|..   .++.++.++|+++++++|
T Consensus        80 ~~t~~a~~~ai~~~G~~pv~vDi~~~~--~~~~~~~~~~~~~~t~avi~vh---~~G~~---~~~~~i~~~~~~~~i~lI  151 (371)
T d2fnua1          80 PISFVATANMLLESGYTPVFAGIKNDG--NIDELALEKLINERTKAIVSVD---YAGKS---VEVESVQKLCKKHSLSFL  151 (371)
T ss_dssp             SSSCTHHHHHHHHTTCEEEECCBCTTS--SBCGGGSGGGCCTTEEEEEEEC---GGGCC---CCHHHHHHHHHHHTCEEE
T ss_pred             cccccccceeeeccCcccccccccccc--cccchhhhhhccchhhcccccc---ccccc---cccccccccccccchhhc
Confidence            999999999999999999999987643  3566788888888899988654   55666   356778888999999999


Q ss_pred             EccCCCcccc-CCCCCCcccccCCCCCEEEEccC--ccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhhcc------
Q 019298          211 ADEVYGHLVF-GDKPFVPMGVFGSTVPILTLGSL--SKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDI------  281 (343)
Q Consensus       211 ~D~ay~~~~~-~~~~~~~~~~~~~~~~~i~~~S~--sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~------  281 (343)
                      +|.+++.... .+..   ...++.    +.+.||  +|.++..+  .|.+++.+       .++.++++..+..      
T Consensus       152 EDaaqa~Ga~~~~~~---~G~~g~----~~~~Sf~~~K~l~~g~--GG~i~t~~-------~~~~~~~~~~~~~g~~~~~  215 (371)
T d2fnua1         152 SDSSHALGSEYQNKK---VGGFAL----ASVFSFHAIKPITTAE--GGAVVTND-------SELHEKMKLFRSHGMLKKD  215 (371)
T ss_dssp             EECTTCTTCEETTEE---TTSSSS----EEEEECCTTSSSCCSS--CEEEEESC-------HHHHHHHHHHTBTTEEESS
T ss_pred             cchhhccCceecccc---CCcccc----cccccccccccccccc--ceEEEeec-------hhhhhhccccccccccccc
Confidence            9999987432 2221   122222    455555  78865433  57777653       5677777765321      


Q ss_pred             -----------ccCcchHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCcee
Q 019298          282 -----------LGDPATFIQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELIN  330 (343)
Q Consensus       282 -----------~~~~~~~~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~  330 (343)
                                 .+..+.+ |+++...-|....++++.   -+++.+.+.+.|...+++..
T Consensus       216 ~~~~~~~~~G~n~r~sel-~Aaigl~qL~~l~~~~~~---R~~~~~~y~~~l~~~~~~~~  271 (371)
T d2fnua1         216 FFEGEVKSIGHNFRLNEI-QSALGLSQLKKAPFLMQK---REEAALTYDRIFKDNPYFTP  271 (371)
T ss_dssp             SSCEEESSCCCBCCCCHH-HHHHHHHHHTTHHHHHHH---HHHHHHHHHHHHTTCSSEEE
T ss_pred             ccccccccccccccccch-hhhhhhhhhhhccchhhh---hhhhhhhhcccccccccccc
Confidence                       1122333 444424444443444443   33445555677777766553

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

Probab=99.55  E-value=4.1e-14  Score=129.53  Aligned_cols=209  Identities=10%  Similarity=0.033  Sum_probs=136.3

Q ss_pred             CCcEEEecChHHHHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcCceeEEeecCC-CCCCCCCHHHHHhhhcC----
Q 019298          100 PNDVFVTSGCTQAIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIEVRHFDLLP-DKGWEVDLDDIESLADQ----  172 (343)
Q Consensus       100 ~~~i~~~~g~~~al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~~~~----  172 (343)
                      .....+..|++.++..++.++.  .+++.|++++-.|.++...+...|++.+.++..+ ++.+.+|+++|++++.+    
T Consensus       130 ~~~~~~~~~t~~~~~~~l~a~r~~~~~~~vi~s~~~H~s~~k~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~  209 (434)
T d2z67a1         130 VHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIEL  209 (434)
T ss_dssp             CEEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHHHT
T ss_pred             cceeecCcHHHHHHHHHHHHHHHhhcCceEEEeccCCHHHHHHHHHhCCcceEEEeecCCCccCCCHHHHHHHHHhhhhc
Confidence            3355556677777777776653  3689999999999999999999999988886533 34467999999999864    


Q ss_pred             -CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccC-CCCCCcccccCCCCCEEEEccCccccCCC
Q 019298          173 -NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFG-DKPFVPMGVFGSTVPILTLGSLSKRWIVP  250 (343)
Q Consensus       173 -~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~-~~~~~~~~~~~~~~~~i~~~S~sK~~~~~  250 (343)
                       .+.+|++..|++++|.+   +++++|+++|++||+++++|++|+..... .........   .+-.+++.|++|.++.+
T Consensus       210 ~~~~~v~~~~~~~~~g~~---~~l~~i~~~~~~~~~~l~vD~a~g~~~~~~~~~~~~~~~---~~~D~~~~s~hK~l~~~  283 (434)
T d2z67a1         210 GNRPCVLSTLTFFPPRNS---DDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFK---YRVDAVVSSSDKNLLTP  283 (434)
T ss_dssp             TCCEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHT---SCCSEEEEEHHHHHCCC
T ss_pred             CCceEEEeccCcCCCccc---cCHHHHHHHHHHhCCeEEEeccchhhhhhcccccccccc---CCcceEEEcCccccccC
Confidence             46677888999999999   66889999999999999999999863311 111111111   12338899999987653


Q ss_pred             CCcEEEEEEeCCCCCCCchHHHHHHhhhhccccCcchHH-HHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcC
Q 019298          251 GWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFI-QVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       251 G~r~G~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~  324 (343)
                       ...|++...       ++.+++++..........++.. ..+. ...+.. ..+.+..++..++.+++.+.|++
T Consensus       284 -~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~a~-l~~~~~-~g~~~~~~~~~~~a~~l~~~L~~  348 (434)
T d2z67a1         284 -IGGGLVYST-------DAEFIKEISLSYPGRASATPVVNTLVS-LLSMGS-KNYLELVKNQKNSKKLLDELLND  348 (434)
T ss_dssp             -SSCEEEEES-------CHHHHHHHHTTSCSCBCSHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCccccccC-------cHHHHHHHHhhcccccccchHHHHHHH-HHHHHH-hcchhHHHHHHHHHHHHHHHHHH
Confidence             234566654       3567777776654333223222 2222 111111 22223555555566666665554

>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.54  E-value=7.7e-13  Score=116.27  Aligned_cols=279  Identities=14%  Similarity=0.087  Sum_probs=175.4

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC---CCCC---HHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP---TAGL---PLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~---~~lr~~ia~~~~~~~~~~~~~~~i~~~~  107 (343)
                      ....|+|--.+      .-.++.+++++...+.+....+|+-   ..|.   .++++...+..++.|+.  ..-+|-. .
T Consensus        22 q~~~l~LiaSE------N~~S~~v~~a~~S~l~nkyaeG~pg~ryy~G~~~id~iE~la~~ra~~lF~a--~~anVqp-~   92 (405)
T d1kl1a_          22 QHAKIELIASE------NFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGA--EHANVQP-H   92 (405)
T ss_dssp             HHHSEECCTTC------CCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHCC--SEEECCC-S
T ss_pred             HHcCceEeccC------CcCCHHHHHHhcCcccCcCcCCCCCccccCCchhHHHHHHHHHHHHHHHhCC--Ccceeec-c
Confidence            34568887666      2357888888877775433333432   1232   33333333444433432  2223333 4


Q ss_pred             ChHHHHHHHHHHhcCCCCeEEEeCCCCcchHH-----HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeC
Q 019298          108 GCTQAIDVAMALLSRPGANILLPRPGFPIYEL-----SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIIN  181 (343)
Q Consensus       108 g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~  181 (343)
                      +++.|...++.+|++|||+|+..++..++...     .......+.+.+++++ +++.+|.|++++.++. +|++|++..
T Consensus        93 SGs~An~av~~all~pGD~im~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~-~~~~ID~d~l~~~a~~~kPklIi~G~  171 (405)
T d1kl1a_          93 SGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDP-ETHVIDYDDVREKARLHRPKLIVAAA  171 (405)
T ss_dssp             SHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCSEEEECC
T ss_pred             CchHHHHHHHHHhcCCCCEEEEeecccccccccCccccccceEEEEEEeccch-hcccccHHHHHHHHHhhCcceEEecc
Confidence            55777888899999999999999877765432     1122235667777765 4568999999997765 777777655


Q ss_pred             CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCc-cccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEe
Q 019298          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT  260 (343)
Q Consensus       182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~  260 (343)
                      ..+|--.     +++++.++|.+.|.+++.|.+|.. ++-++.-+.++. +.+    ++..|++|+  +.|.|-|.+++.
T Consensus       172 S~y~r~~-----d~~~~reIad~vga~l~~D~aH~~GLIa~g~~~~P~~-~aD----vvt~tThKt--lrGPrgg~I~~~  239 (405)
T d1kl1a_         172 SAYPRII-----DFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVP-YAH----FVTTTTHKT--LRGPRGGMILCQ  239 (405)
T ss_dssp             SSCCSCC-----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTT-TCS----EEEEESSST--TCCCSCEEEEEC
T ss_pred             ccccccc-----ChHHHHHHHhhhCCEEecchhhHhhhhhhhhcCChhh-hhh----heecccccc--ccCCCCceEEec
Confidence            5555432     367778888899999999999984 444544333442 222    789999999  578889998884


Q ss_pred             CCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchh--hHHHHHHHHHHHHHHHHHHHhhcCCCCceee-CCCCc
Q 019298          261 DPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLST--IMQIMIHGNFLENFAGSCVPSYKLIPELINF-KSTGS  336 (343)
Q Consensus       261 ~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~-~~~~g  336 (343)
                              .++.+++.... ....+.+.....|+...++.+  ..++-+..+++.++.+.|.+.|.+. |+.+. .....
T Consensus       240 --------~~~~~~i~~avfPg~qggp~~~~iAa~Aval~Ea~~~~fk~Ya~qvv~NAkaLa~~L~~~-G~~vv~ggTd~  310 (405)
T d1kl1a_         240 --------EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-GFTLVSGGTDN  310 (405)
T ss_dssp             --------HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSS
T ss_pred             --------chhHHHHHhhhCcccccCcchhHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcC-CceeecCCCcc
Confidence                    36777666553 222222222222221333332  1345558888999999999999987 88854 33556


Q ss_pred             eEeeecC
Q 019298          337 SLKYLDL  343 (343)
Q Consensus       337 ~~~~~~l  343 (343)
                      ..+|+++
T Consensus       311 H~vlvdl  317 (405)
T d1kl1a_         311 HLLLVDL  317 (405)
T ss_dssp             SEEEEEC
T ss_pred             ceeeccc
Confidence            6666654

>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Escherichia coli [TaxId: 562]

Probab=99.53  E-value=8.5e-13  Score=116.57  Aligned_cols=281  Identities=14%  Similarity=0.059  Sum_probs=175.8

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC---CCCC---HHHHHHHHHHHhhhCCCCCCCCcEEEec
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP---TAGL---PLTRRAIAEYLSRDLPYKLTPNDVFVTS  107 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~---~~lr~~ia~~~~~~~~~~~~~~~i~~~~  107 (343)
                      ...-|+|--.+      .-.++.+++++...+.+....+|+-   ..|.   .++++...+..++.|+.  ...+|-. .
T Consensus        25 q~~~i~LiaSE------N~~S~~v~~a~~S~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~a--~~anVqp-~   95 (416)
T d1dfoa_          25 QEEHIELIASE------NYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGA--DYANVQP-H   95 (416)
T ss_dssp             HHHSEECCTTC------CCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC--SEEECCC-S
T ss_pred             HHcCceEecCc------ccCCHHHHHHhcCcccCcccCCCCCCcccCCChhHHHHHHHHHHHHHHHhCC--Ccceeec-c
Confidence            35668887666      2357888888877765433333332   2233   33333333343333432  2223333 5


Q ss_pred             ChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH-----HHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-CceEEEEeC
Q 019298          108 GCTQAIDVAMALLSRPGANILLPRPGFPIYELS-----AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTVALVIIN  181 (343)
Q Consensus       108 g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~  181 (343)
                      +++.|...++.+|++|||+|+..+..+++....     +.....+...++++.  ...+|.|++++..+. +|++|++..
T Consensus        96 SGs~AN~av~~All~pGD~Il~l~l~~GGHlshg~~~~~~g~~~~~~~y~~d~--~~~IDyd~l~~~a~~~kPklIi~G~  173 (416)
T d1dfoa_          96 SGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDA--TGHIDYADLEKQAKEHKPKMIIGGF  173 (416)
T ss_dssp             SHHHHHHHHHHHHCCTTCEEEEECTTTTCCGGGTCTTSHHHHHSEEEEECBCS--SSSBCHHHHHHHHHHHCCSEEEEEC
T ss_pred             cCccHHHHHHHHhcCCCCeeeeccccccccccccccccccCceEEEEecccCC--ccCccHHHHHHHHHHhccceEEecc
Confidence            668888889999999999999999888765331     112234556666553  345999999987654 888888765


Q ss_pred             CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCc-cccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEe
Q 019298          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT  260 (343)
Q Consensus       182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~  260 (343)
                      ..+|  ..+   +++++.++|.+.|.++++|.+|.. ++-++.-+.++.. .    .++.+|++|+  +.|.|-|.+++.
T Consensus       174 S~y~--r~~---d~~~~reiad~vga~l~~D~aH~~GLIa~g~~~sP~~~-a----Dvvt~tThKt--lrGPrggiI~~~  241 (416)
T d1dfoa_         174 SAYS--GVV---DWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPH-A----HVVTTTTHKT--LAGPRGGLILAK  241 (416)
T ss_dssp             SSCC--SCC---CHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCCTTT-S----SEEEEESSST--TCCCSCEEEEES
T ss_pred             cccc--ccc---CHHHHHHHHHhcCceEEcchhhhhcceeccccCCcccc-c----ceeeeehhhc--ccCCCceEEEec
Confidence            4444  333   367777778899999999999985 3433433333332 2    2899999999  577788999885


Q ss_pred             CCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchh--hHHHHHHHHHHHHHHHHHHHhhcCCCCceee-CCCCc
Q 019298          261 DPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLST--IMQIMIHGNFLENFAGSCVPSYKLIPELINF-KSTGS  336 (343)
Q Consensus       261 ~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~~~~~~L~~~~g~~~~-~~~~g  336 (343)
                      ++     +.++.+++.+.. ....+.+.....|+...++.+  ..++-+..+++.++...|.+.|.+. |+.+. .....
T Consensus       242 ~~-----~~~~~~~i~~avfPg~qggp~~~~iaa~Aval~Ea~~~~fk~Y~~qvv~NA~~La~~L~~~-G~~iv~ggTdn  315 (416)
T d1dfoa_         242 GG-----SEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLER-GYKVVSGGTDN  315 (416)
T ss_dssp             SC-----CHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSS
T ss_pred             cc-----hHhHHHHHHhhhCcccccCccHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhC-CcccccCCCCC
Confidence            32     135777775543 222222222222221333332  1455668889999999999999988 88854 34556


Q ss_pred             eEeeecC
Q 019298          337 SLKYLDL  343 (343)
Q Consensus       337 ~~~~~~l  343 (343)
                      ..+++++
T Consensus       316 Hlvlvdl  322 (416)
T d1dfoa_         316 HLFLVDL  322 (416)
T ss_dssp             SEEEEEC
T ss_pred             ceeEEEe
Confidence            6667664

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=1.3e-12  Score=117.76  Aligned_cols=260  Identities=13%  Similarity=0.030  Sum_probs=164.6

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCC-CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFN-GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCT  110 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~  110 (343)
                      +++.++||..|.-.  ..++ .+|++.++++++++..... .+....-...+.+.++++.        ..+.++++++++
T Consensus        39 dG~~ylD~~~g~~~--~~lGh~~p~i~~Av~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~v~~~~sGs  108 (404)
T d2byla1          39 EGRKYFDFLSSISA--VNQGHCHPKIVNALKSQVDKLTLTSRAFYNNVLGEYEEYITKLF--------NYHKVLPMNTGV  108 (404)
T ss_dssp             TCCEEEESSHHHHT--CTTCBTCHHHHHHHHHHHTTCCCCCTTEEESSHHHHHHHHHHHH--------TCSEEEEESSHH
T ss_pred             CCCEEEEecCCHHH--HhhcCCCHHHHHHHHHHHhhCCCcccccccchHHHHHHhhhhcc--------cccccccccCcc
Confidence            48899999887633  1234 7899999999998764221 1112222334555555544        457899999999


Q ss_pred             HHHHHHHHHhcC----------CCCeEEEeCCCCcchHHHHHhcCce-------------eEEeecCCCCCCCCCHHHHH
Q 019298          111 QAIDVAMALLSR----------PGANILLPRPGFPIYELSAAFRHIE-------------VRHFDLLPDKGWEVDLDDIE  167 (343)
Q Consensus       111 ~al~~~~~~l~~----------~gd~vl~~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~~~l~  167 (343)
                      ++...+++....          ....++...-+|+.....+......             +..++.       -|+++++
T Consensus       109 eA~e~Aik~ar~~~~~~~~~~~~~~~i~~~~~~~hg~t~~~~~~~~~~~~~~~~~p~~~~~~~~p~-------~d~~~l~  181 (404)
T d2byla1         109 EAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPALE  181 (404)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCCSHHHHTTCCCHHHHTTSCSCCTTEEEECT-------TCHHHHH
T ss_pred             ccchhHHHHHHHHhhhccccccccccccccCCCccccccceeccCCCcccccCCCCCCCCeeEecc-------cCHHHHH
Confidence            999999987531          2246776666775533333222111             112211       3689999


Q ss_pred             hhhcCCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCcc
Q 019298          168 SLADQNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSK  245 (343)
Q Consensus       168 ~~~~~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK  245 (343)
                      +.+.++..+.++..| ....|.. .+++.+++|.++|++||+++|+||++.+|...+... ....++-.+. |+  +++|
T Consensus       182 ~~l~~~~iAaviiEPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~-a~~~~gv~PD-i~--~~gK  257 (404)
T d2byla1         182 RALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWL-AVDYENVRPD-IV--LLGK  257 (404)
T ss_dssp             HHHTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCS-EE--EECG
T ss_pred             HhcCCCCeEEEEECCccCCCCCccCCHHHHHHHHHHHHhcCeEEEeeccccccccccccc-hhhhcCCCCC-EE--EECc
Confidence            998765555566677 5556644 677899999999999999999999999875544422 2222332223 33  6899


Q ss_pred             ccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHH--HHHHHHHHHHHHHHhh
Q 019298          246 RWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLENFAGSCVPSY  322 (343)
Q Consensus       246 ~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~~~~~~~~~~L  322 (343)
                      .++..++.+|.++++.        ++.+.+.... ..++..++++.+++ .+.|+   .+.+  ..++.+++.+.+.+.|
T Consensus       258 ~l~gG~~p~~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa-~a~L~---~i~~~~l~~~~~~~g~~l~~~l  325 (404)
T d2byla1         258 ALSGGLYPVSAVLCDD--------DIMLTIKPGEHFSTYGGNPLGCRVA-IAALE---VLEEENLAENADKLGIILRNEL  325 (404)
T ss_dssp             GGGTTSSCCEEEEECH--------HHHTTSCTTSSCCSSTTCHHHHHHH-HHHHH---HHHHTTHHHHHHHHHHHHHHHH
T ss_pred             hhhCCCccceeeeech--------hhhhccCCCCCCcCCCcCHHHHHHH-HHHHH---HHHhcCchhhhhHhhHHHHHHH
Confidence            9775558999999853        4554444332 23556678877777 44432   2222  5666666677777777


Q ss_pred             cCC
Q 019298          323 KLI  325 (343)
Q Consensus       323 ~~~  325 (343)
                      +++
T Consensus       326 ~~l  328 (404)
T d2byla1         326 MKL  328 (404)
T ss_dssp             HTS
T ss_pred             Hhh
Confidence            664

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=7.7e-14  Score=125.66  Aligned_cols=187  Identities=13%  Similarity=0.088  Sum_probs=127.2

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeE
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAP--TAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANI  127 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~v  127 (343)
                      .+.++.++++|...    ..+...+  ..-..+.|+.+++++      +.+.+ .|+++.|++++++.++..++.+|+++
T Consensus        28 ~~~~~~Vl~am~~~----~i~HRs~~f~~i~~ea~~~l~~ll------g~~~~~~ii~~gsgT~a~~~~i~~l~~~~~~~   97 (388)
T d1h0ca_          28 SNLPPRIMAAGGLQ----MIGSMSKDMYQIMDEIKEGIQYVF------QTRNPLTLVISGSGHCALEAALVNVLEPGDSF   97 (388)
T ss_dssp             CCCCHHHHHHHTCC----CCCTTSHHHHHHHHHHHHHHHHHH------TCCCSEEEEESSCHHHHHHHHHHHHCCSSCCE
T ss_pred             CCCCHHHHHHhCcC----CCCCCCHHHHHHHHHHHHHHHHHh------CCCCCcEEEEcCcHHHHHHHHHHHhhccCCce
Confidence            45678888776432    2222211  112356677777777      33333 68888999999999999999999999


Q ss_pred             EEeCCCCcchHHHH--HhcCceeEEeecCCCCCCCCCHHHHHhhhc-CCceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298          128 LLPRPGFPIYELSA--AFRHIEVRHFDLLPDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (343)
Q Consensus       128 l~~~p~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~  204 (343)
                      ++....+.......  ...+..+..+..  ..+..+|.+.+++.+. .+++++++++.+|.||...   ++++|+++|++
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~n~tG~i~---pi~~i~~~~~~  172 (388)
T d1h0ca_          98 LVGANGIWGQRAVDIGERIGARVHPMTK--DPGGHYTLQEVEEGLAQHKPVLLFLTHGESSTGVLQ---PLDGFGELCHR  172 (388)
T ss_dssp             EECBSSHHHHHHHHHHHHHC--CBCCBC--CTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEEC---CCTTHHHHHHT
T ss_pred             eeecccceeeeecccccccccccccccc--CCccccchHHHHHHhccCCcceEEEeeeeecccccc---CHHHHHHHhhc
Confidence            99988887654433  334444444443  3455688888877654 4789999999999999995   46788888999


Q ss_pred             cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEEe
Q 019298          205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTT  260 (343)
Q Consensus       205 ~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~  260 (343)
                      +|+++++|.+++...    .+..+.   ..+-.+++.|..|.++.++ .+|++..+
T Consensus       173 ~g~~~~vD~~qs~g~----~~~d~~---~~~~D~~~~s~~K~~~gp~-g~~~~~~~  220 (388)
T d1h0ca_         173 YKCLLLVDSVASLGG----TPLYMD---RQGIDILYSGSQKALNAPP-GTSLISFS  220 (388)
T ss_dssp             TTCEEEEECTTTTTT----SCCCTT---TTTCSEEEEESSSTTCCCT-TCEEEEEC
T ss_pred             ccccceecccccccc----cccccc---ccccceecccccccccCCC-ceEEEeec
Confidence            999999999998632    222222   2233488889999986654 35666653

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.51  E-value=3.2e-12  Score=117.47  Aligned_cols=237  Identities=9%  Similarity=0.039  Sum_probs=157.2

Q ss_pred             CcCccccHHHHHHHHHhhccccccccceeEeccCCCCCCC---CCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH
Q 019298           10 NTGSIITIKGMLSLLMQSVDDEKNEKKVISLAMGDPTVHS---CFHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAI   86 (343)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~i   86 (343)
                      .|........++..+.+...     +...+.++  |....   ....++.+...+-..+-+.....|...+...++++.+
T Consensus        46 ~P~~g~~~~~~l~~~~~~i~-----~~~~~~~~--P~f~~~~~~~~~~~~~l~~~~~~~~n~n~~~~~~sp~~t~iE~~v  118 (476)
T d1js3a_          46 APQEPDTFEDILQDVEKIIM-----PGVTHWHS--PYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVM  118 (476)
T ss_dssp             CCSSCCCHHHHHHHHHHTTG-----GGCCCTTS--TTBCSSSCCCCCHHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHH
T ss_pred             cCcCCCCHHHHHHHHHHHHh-----CCCCCCCC--CCeeEeCCCCCCHHHHHHHHHHHhhcccccchhhhhhHHHHHHHH
Confidence            34444567777777766652     22233322  22111   1223444444443333333333455455668899999


Q ss_pred             HHHHhhhCCCCC-------CCCcEEEecChHHHHHHHHHHhcC----------CC---------CeEEEeCCCCcchHHH
Q 019298           87 AEYLSRDLPYKL-------TPNDVFVTSGCTQAIDVAMALLSR----------PG---------ANILLPRPGFPIYELS  140 (343)
Q Consensus        87 a~~~~~~~~~~~-------~~~~i~~~~g~~~al~~~~~~l~~----------~g---------d~vl~~~p~~~~~~~~  140 (343)
                      .+|+.+.+|.+-       ....-++|+|+++++..++.....          .|         -+|++++-+|.++...
T Consensus       119 ~~wl~~l~g~p~~~~~~~~~~~~G~~~~Ggs~anl~al~~AR~~~~~~~~~~~~g~~~~~~~~~~vv~~s~~~H~Si~ka  198 (476)
T d1js3a_         119 MDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERA  198 (476)
T ss_dssp             HHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHH
T ss_pred             HHHHHHHhCCCcccccCCCCCCCceECCcHHHHHHHHHHHHHHHHHHhhcccccCcccccccCceEEEecccccHHHHHH
Confidence            999999888752       223568999999998888765421          11         2588899999999999


Q ss_pred             HHhcCceeEEeecCCCCCCCCCHHHHHhhhcCC------ceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccC
Q 019298          141 AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQN------TVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEV  214 (343)
Q Consensus       141 ~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~a  214 (343)
                      +...|+++..++++  +++.+|+++|++.+++.      +-+|+.+.+++.||.+   +++++|+++|++|++++.+|.|
T Consensus       199 ~~~lGl~~~~v~~d--~~~~md~~~L~~~i~~~~~~g~~p~~VvataGtt~~G~i---Dpl~~I~~i~~~~~~wlHVDAA  273 (476)
T d1js3a_         199 GLIGGVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSF---DNLLEVGPICHEEDIWLHVDAA  273 (476)
T ss_dssp             HHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCB---CCHHHHHHHHHHTTCEEEEECT
T ss_pred             HHhcCceEEEeccC--CCCCcCHHHHHHHHHHHHhcCCCcEEEeecCCCccceee---ccHHHHHHHHHhcCcEEEEecc
Confidence            99999999988875  45789999999988641      3345566778999999   8899999999999999999999


Q ss_pred             CCccccCCCCCCc-ccccCCCCCEEEEccCccccCCCCCcEEEEEEeC
Q 019298          215 YGHLVFGDKPFVP-MGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD  261 (343)
Q Consensus       215 y~~~~~~~~~~~~-~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~~~  261 (343)
                      |+++......... +..+..  -.-+..+++|.++.|. ..|.++..+
T Consensus       274 ~Gg~~~~~~~~~~~~~gi~~--aDSit~d~HK~l~~P~-~~g~~l~r~  318 (476)
T d1js3a_         274 YAGSAFICPEFRHLLNGVEF--ADSFNFNPHKWLLVNF-DCSAMWVKR  318 (476)
T ss_dssp             TGGGGGGSTTTGGGGTTGGG--CSEEEECHHHHSSCCS-SCEEEEESC
T ss_pred             cchhhhhhcchhhhhcCCcc--cceeeecCccccccCC-cceeecccc
Confidence            9986543322211 111111  1256678999965554 567777754

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

Probab=99.50  E-value=2.7e-13  Score=124.93  Aligned_cols=177  Identities=13%  Similarity=0.049  Sum_probs=112.6

Q ss_pred             CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE-ecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhc-CceeEE
Q 019298           73 YAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFV-TSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFR-HIEVRH  150 (343)
Q Consensus        73 Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~-~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~  150 (343)
                      +.+..-..++++.+|++++        .++.++ ++|++.++..++.+++++||+|++++-+|.+....+... +....+
T Consensus        62 ~~~~~~i~eae~~~A~~~g--------a~~a~f~~~Gtt~~n~a~i~a~~~~gd~Vi~~~~~H~Sv~~~~~~l~~~~~~~  133 (462)
T d1c4ka2          62 LIHEGPAVAAEKHAARVYN--------ADKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVY  133 (462)
T ss_dssp             TTTBTHHHHHHHHHHHHTT--------CSEEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEE
T ss_pred             cCCCHHHHHHHHHHHHHhC--------CCeEEEECCchHHHHHHHHHHhcCCCCeEEecccchHHHHHHHHHHhcCCcee
Confidence            3333345789999999983        455555 566677777888889999999999999998876655443 444433


Q ss_pred             e--ecCCCCC------CCCCHHHH---------HhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEcc
Q 019298          151 F--DLLPDKG------WEVDLDDI---------ESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADE  213 (343)
Q Consensus       151 ~--~~~~~~~------~~~d~~~l---------~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~  213 (343)
                      .  +.++...      ..++.+.+         +.+...++..+++...+|-.|.+.   ++++|+++|+++|+++++|+
T Consensus       134 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~G~~~---dl~~I~~ia~~~g~~l~vD~  210 (462)
T d1c4ka2         134 LQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIY---NAHEVVKRIGHLCDYIEFDS  210 (462)
T ss_dssp             ECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSEEE---CHHHHHHHHGGGBSEEEEEC
T ss_pred             eecccccccccCCCChHHhhHHHHHhhhhhhcHHhhhccCCceeEEEEeeeeccchh---hHHHHHHHHHHcCCEEEEec
Confidence            3  3332111      12233322         333344566677777778899994   57888999999999999999


Q ss_pred             CCCccccC-CCCCCcccccC-----CCCCEEEEccCccccCCCCCcEEEEEEeCC
Q 019298          214 VYGHLVFG-DKPFVPMGVFG-----STVPILTLGSLSKRWIVPGWRLGWFVTTDP  262 (343)
Q Consensus       214 ay~~~~~~-~~~~~~~~~~~-----~~~~~i~~~S~sK~~~~~G~r~G~i~~~~~  262 (343)
                      +++..... +..........     ..+..+++.|++|+++..+  .|.++..+.
T Consensus       211 A~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~~S~HK~lg~~~--~g~ll~~~~  263 (462)
T d1c4ka2         211 AWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFS--QTSQIHKKD  263 (462)
T ss_dssp             TTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCT--TCEEEEEEC
T ss_pred             hhhccccccCcCCcchhhccccccccCCccEEEEecCccccccc--ceEEEEecc
Confidence            99864322 21111111111     1123699999999977654  355555443

>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Kynureninase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.49  E-value=1.1e-13  Score=125.26  Aligned_cols=204  Identities=12%  Similarity=0.013  Sum_probs=140.6

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC--------CCCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP--------TAGLPLTRRAIAEYLSRDLPYKLTPNDVFV  105 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~--------~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~  105 (343)
                      .+++|.|+.+.-     .+.+..+.+++.+.+.+... +...        ..-..++|+.+|+++      +.++++|++
T Consensus        25 ~~~~iYLd~as~-----g~~p~~v~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~e~~R~~iA~ll------ga~~~ei~~   92 (404)
T d1qz9a_          25 PEGVIYLDGNSL-----GARPVAALARAQAVIAEEWG-NGLIRSWNSAGWRDLSERLGNRLATLI------GARDGEVVV   92 (404)
T ss_dssp             CTTCEECCTTTS-----CCCBTTHHHHHHHHHHTCCC-CCGGGHHHHTSGGGHHHHHHHHHHTTT------TCCTTSEEE
T ss_pred             CCCCEEcCCccc-----ccCCHHHHHHHHHHHHHHhc-ccCcccccchhHHHHHHHHHHHHHHHh------CCCCCcEEE
Confidence            456788888862     35678888888888754211 1100        011236888888888      679999999


Q ss_pred             ecChHHHHHHHHHHh------cCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEE
Q 019298          106 TSGCTQAIDVAMALL------SRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVI  179 (343)
Q Consensus       106 ~~g~~~al~~~~~~l------~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~  179 (343)
                      |+++++++..++...      ..+++.|++.+-.+..........+.++.......  ....+.+.+++++++++++|++
T Consensus        93 ~~~~T~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~T~lV~i  170 (404)
T d1qz9a_          93 TDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTL--RLVDSPEELPQAIDQDTAVVML  170 (404)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEE--EEESSGGGHHHHCSTTEEEEEE
T ss_pred             ecCchHHHHHHhhhhhhhhcccCCCcEEEEeccccchHHHHHHhhhheeeeeceec--cccccchhHHHhcCCCceEEEE
Confidence            999999998876543      35788888888777665444444433333322221  2235788999999999999999


Q ss_pred             eCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298          180 INPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT  259 (343)
Q Consensus       180 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~  259 (343)
                      ++.+|.||..++   +++|+++|+++++.+++|.++....    .+..+....   ..+++.|.+|.+..+.-..|++..
T Consensus       171 ~~v~~~tG~~~p---v~~i~~~~~~~~~~~~vD~~q~~g~----~~~~~~~~~---~d~~~~s~~K~~~~~~g~~g~~~~  240 (404)
T d1qz9a_         171 THVNYKTGYMHD---MQALTALSHECGALAIWDLAHSAGA----VPVDLHQAG---ADYAIGCTYKYLNGGPGSQAFVWV  240 (404)
T ss_dssp             ESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTT----SCCCHHHHT---CSEEEECSSSTTCCCTTCCCEEEE
T ss_pred             ecccccccceec---HHHHhccccccccceeEEeeccccc----ccccccccc---ceEEEEechhhcccCCceEEEEEe
Confidence            999999999965   6777888999999999999998732    222222222   337888999986554333566666


Q ss_pred             eC
Q 019298          260 TD  261 (343)
Q Consensus       260 ~~  261 (343)
                      +.
T Consensus       241 ~~  242 (404)
T d1qz9a_         241 SP  242 (404)
T ss_dssp             CT
T ss_pred             ch
Confidence            43

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

Probab=99.48  E-value=3.7e-13  Score=124.19  Aligned_cols=138  Identities=14%  Similarity=0.104  Sum_probs=107.8

Q ss_pred             CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCC---------eEEEeCCCCcchHHHHH
Q 019298           72 GYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGA---------NILLPRPGFPIYELSAA  142 (343)
Q Consensus        72 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd---------~vl~~~p~~~~~~~~~~  142 (343)
                      .|+..+...+|++.+++++        ..+.+++++++++|...++++++++|+         .+......|......+.
T Consensus        69 ~Y~~~~~~~~le~~~a~l~--------G~~~~~~~~sGt~A~~~a~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~  140 (467)
T d2v1pa1          69 AFSGSRSYYALAESVKNIF--------GYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQ  140 (467)
T ss_dssp             CSSSCHHHHHHHHHHHHHT--------CCSEEEEECSSTTTHHHHHHHHHHHHHHHHCCCTTTCEEEESSCCHHHHHHHH
T ss_pred             hhcCCchHHHHHHHHHHHH--------CCCEEEECCCCHHHHHHHHHHHhhccceEecCCCCcEEEEecccccccHHHHH
Confidence            5777777889999999998        457889999999999999999876544         35555556666677778


Q ss_pred             hcCceeEEeecCCC--------CCCCCCHHHHHhhhcC----CceEEEEeCCCCC-cccccCHHHHHHHHHHHhhcCcEE
Q 019298          143 FRHIEVRHFDLLPD--------KGWEVDLDDIESLADQ----NTVALVIINPGNP-CGNVYSYQHLQKLAETANKLKTLV  209 (343)
Q Consensus       143 ~~g~~~~~~~~~~~--------~~~~~d~~~l~~~~~~----~~~~i~~~~p~np-tG~~~~~~~l~~l~~~~~~~~~~~  209 (343)
                      ..|..+..++....        ....+|++++++.+++    .+.++++...+|. .|.+++.++++++.++|++||+++
T Consensus       141 ~~G~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~i~~e~~~~~~gg~~~~~~~l~~i~~ia~~~g~~l  220 (467)
T d2v1pa1         141 INGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPV  220 (467)
T ss_dssp             HTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCE
T ss_pred             HcCCeeeecccccccccccccccccCCCHHHHHHHHhhcCccccceeeecceeeccccccCCHHHHHHHHHHHHHcCCEE
Confidence            88988887765431        1346899999998753    3456677777664 477889999999999999999999


Q ss_pred             EEccCCCc
Q 019298          210 IADEVYGH  217 (343)
Q Consensus       210 i~D~ay~~  217 (343)
                      ++|+++..
T Consensus       221 ~~D~a~~~  228 (467)
T d2v1pa1         221 VMDSARFA  228 (467)
T ss_dssp             EEECTTHH
T ss_pred             EEechhhh
Confidence            99999753

>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Glutamate-1-semialdehyde aminomutase (aminotransferase)
species: Synechococcus sp., strain GR6 [TaxId: 1131]

Probab=99.47  E-value=3.6e-12  Score=115.87  Aligned_cols=263  Identities=14%  Similarity=0.057  Sum_probs=159.0

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++.++|+..+.-..  .++ .+|++.++++++++..... ..    .......+++.+....+   ..+.+.+++++++
T Consensus        50 ~G~~ylD~~~~~~~~--~lGh~hp~i~~ai~~~~~~~~~~-~~----~~~~~~~la~~~~~~~~---~~~~v~f~~sGse  119 (427)
T d2gsaa_          50 DGNRYIDYVGTWGPA--ICGHAHPEVIEALKVAMEKGTSF-GA----PCALENVLAEMVNDAVP---SIEMVRFVNSGTE  119 (427)
T ss_dssp             TSCEEEESSGGGTTT--TTCBTCHHHHHHHHHHHTTCSCC-SS----CCHHHHHHHHHHHHHST---TCSEEEEESSHHH
T ss_pred             CCCEEEEechhHHHH--hccCCcHHHHHHHHHHHHhcCcc-cc----chhHHHHHHHHHHhhCC---ccccccccCCcHH
Confidence            488999998775331  233 6899999999998764321 11    12455566666655332   3478899999999


Q ss_pred             HHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhc--------CceeEE---eecCCC--CCCCCCHHHHHhhhcC--Cc
Q 019298          112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFR--------HIEVRH---FDLLPD--KGWEVDLDDIESLADQ--NT  174 (343)
Q Consensus       112 al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~--------g~~~~~---~~~~~~--~~~~~d~~~l~~~~~~--~~  174 (343)
                      |++.+++...  ....+|+...-+|++....+...        +.....   .+...+  ....-|++.+++.+++  ..
T Consensus       120 A~e~Alk~ar~~t~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~  199 (427)
T d2gsaa_         120 ACMAVLRLMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFAENPGE  199 (427)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEETTCCCCSCGGGCSSCCHHHHHTTCCSCSSSCHHHHTTEEEECTTCHHHHHHHHTTSTTT
T ss_pred             HHHHHHHHHHHhcCCCeEEEEecccccCcceeeeecCCcccccCCCCCCCCcccCccceeccCcchHHHHHHHHHhCCCC
Confidence            9999998753  23468888888887643222111        110000   000000  0012378999998875  33


Q ss_pred             eEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCC
Q 019298          175 VALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW  252 (343)
Q Consensus       175 ~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~  252 (343)
                      .+.++..| ....|.. .+.+.+++|.++|++||+++|+||++.++.. +. ......++-.+.++   +++|.+ ..|.
T Consensus       200 iaavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~r~-g~-~~~~~~~gi~PDi~---~~gK~l-ggG~  273 (427)
T d2gsaa_         200 IAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGFRI-AY-GGVQEKFGVTPDLT---TLGKII-GGGL  273 (427)
T ss_dssp             EEEEEECSSBCSSSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTT-BT-TCHHHHTTCCCSEE---EECGGG-GTTS
T ss_pred             eEEEEEcCCcCCCCCccCCHHHHHHHHHHHHHhceeeeecccccccee-cc-cchHHhcCCCHHHH---hhhhcc-CCCc
Confidence            44555666 4445655 5778899999999999999999999998743 32 22222233223333   357885 4678


Q ss_pred             cEEEEEEeCCCCCCCchHHHHHHhhh----hccccCcchHHHHHHHhccchhhHHHHH--HHHHHHHHHHHHHHhhc
Q 019298          253 RLGWFVTTDPCGMFRKPKVVERMKKY----FDILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLENFAGSCVPSYK  323 (343)
Q Consensus       253 r~G~i~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~~~~~~~~~~L~  323 (343)
                      .+|.+++++        ++.+.+...    ...+++.++++.+++ .+.|+.   +.+  ..++++++.+++.+.|+
T Consensus       274 p~~a~~~~~--------~i~~~~~~~~~~~~~~T~~gnpla~AAa-la~Le~---i~~~~l~~~~~~~g~~l~~~L~  338 (427)
T d2gsaa_         274 PVGAYGGKR--------EIMQLVAPAGPMYQAGTLSGNPLAMTAG-IKTLEL---LRQPGTYEYLDQITKRLSDGLL  338 (427)
T ss_dssp             CCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHH-HHHHHH---HTSTTHHHHHHHHHHHHHHHHH
T ss_pred             ceeeeeehH--------HHHHHhcccCCCcCCCCCCCCchhhHHH-HHhhHH---hhhhhHHhhhhHHHHHHHHHHH
Confidence            889888853        566655432    123456778877777 443321   111  45555555555555554

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.45  E-value=3.8e-12  Score=113.12  Aligned_cols=188  Identities=13%  Similarity=0.097  Sum_probs=127.6

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCCCc--EEEecChHHHHHHHHHHhcCCCCe
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAP--TAGLPLTRRAIAEYLSRDLPYKLTPND--VFVTSGCTQAIDVAMALLSRPGAN  126 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~~~~~~~~~~~~~~--i~~~~g~~~al~~~~~~l~~~gd~  126 (343)
                      .+.++.++++|.+.    ..+.+.+  ..-..+.|+.+++++      ++++++  +++++|+|.+++.++..+..+++.
T Consensus         9 ~~~~~~V~~A~~~~----~~~~~~~~~~~~~~~~r~~l~~l~------~~~~~~~~i~~t~s~T~~~~~~~~~l~~~~~~   78 (361)
T d1m32a_           9 LTTSRTVKEAMLFD----SCTWDDDYNIGVVEQIRQQLTALA------TASEGYTSVLLQGSGSYAVEAVLGSALGPQDK   78 (361)
T ss_dssp             CCCCHHHHHTTCCC----CCTTSHHHHTTTHHHHHHHHHHHH------CSSSSEEEEEEESCHHHHHHHHHHHSCCTTCC
T ss_pred             CCCCHHHHHHhhhh----ccCCCcHHHHHHHHHHHHHHHHHh------CCCCCCEEEEECCCHHHHHHHHHHHhhhhccc
Confidence            45677777765332    2222221  234578999999998      556665  677889999999999999888887


Q ss_pred             EEEeCCCCcc--hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298          127 ILLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (343)
Q Consensus       127 vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~  204 (343)
                      +++....+..  ........+.....+..........+.+.......++++.+.++..+|-||...+   +++++++|++
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tG~~~~---i~~i~~~~~~  155 (361)
T d1m32a_          79 VLIVSNGAYGARMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNP---IDEVGALAHR  155 (361)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHH
T ss_pred             cceeeehhhhhhHHHHhhhhhcccccccccccCCccchhhHHHHHhccCccceEEEeeecccccchh---hhhhhhhhcc
Confidence            7777665533  2333444455555554433333223344445556678999999999999999965   6777888999


Q ss_pred             cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCC-CCCcEEEEEEe
Q 019298          205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTT  260 (343)
Q Consensus       205 ~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~i~~~  260 (343)
                      +|+++++|.+++...    .+..+   ...+-.+++.|..|.+++ +|  +|++..+
T Consensus       156 ~g~~~~vDa~qs~G~----~~~d~---~~~~~D~~~~s~~K~l~gp~G--~g~l~~~  203 (361)
T d1m32a_         156 YGKTYIVDAMSSFGG----IPMDI---AALHIDYLISSANKCIQGVPG--FAFVIAR  203 (361)
T ss_dssp             HTCEEEEECTTTTTT----SCCCT---TTTTCSEEEEESSSTTCCCSS--EEEEEEE
T ss_pred             cceeeEeecccccCc----ccccc---cccccceEEeeecccccCCCC--ceEEEec
Confidence            999999999998732    22222   233345999999999755 46  7777775

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

Probab=99.45  E-value=8.9e-12  Score=111.66  Aligned_cols=261  Identities=17%  Similarity=0.127  Sum_probs=166.2

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      ++++++|+..|.-.  ..++ .+|++.++++++++.....   +..-..+.+..+++.+....  +...+++.+++++++
T Consensus        35 dG~~ylD~~~g~~~--~~lGh~hp~v~~a~~~~~~~~~~~---~~~~~~~~~~~la~~l~~~~--~~~~~~v~f~~sGse  107 (387)
T d1vefa1          35 EGNEYIDCVGGYGV--ANLGHGNPEVVEAVKRQAETLMAM---PQTLPTPMRGEFYRTLTAIL--PPELNRVFPVNSGTE  107 (387)
T ss_dssp             TSCEEEESSHHHHT--CTTCBTCHHHHHHHHHHHHHCCCC---CTTSCCHHHHHHHHHHHHTS--CTTEEEEEEESSHHH
T ss_pred             CCCEEEEcchhHHh--hhhcCCcHHHHHHHHHHHHhhccc---ccccCCchHHHHHHHhhhhc--cccceeeccccCchH
Confidence            48899999776533  2244 6899999999998764221   11122356666666654421  223357999999999


Q ss_pred             HHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcCc-------------eeEEeecCCCCCCCCCHHHHHhhhcCCceE
Q 019298          112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHI-------------EVRHFDLLPDKGWEVDLDDIESLADQNTVA  176 (343)
Q Consensus       112 al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~  176 (343)
                      |+..+++...  ....+|+....+|++....+.....             .+..++.       -|++.|++.+.++..+
T Consensus       108 A~e~Aik~Ar~~t~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~p~~~~~~~~p~-------~d~~~l~~~~~~~iAa  180 (387)
T d1vefa1         108 ANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-------NDVEALKRAVDEETAA  180 (387)
T ss_dssp             HHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-------TCHHHHHHHCCTTEEE
T ss_pred             HHHHHHHHHHhhcccceecccccCCCCCccceEeccCCccccCCCCCCCCCceEeCC-------CCHHHHHHhcCCCeEE
Confidence            9999998753  2336888888888765444433221             1222221       2689999988776655


Q ss_pred             EEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE
Q 019298          177 LVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL  254 (343)
Q Consensus       177 i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~  254 (343)
                      ++ ..| ....|.. .+++.++++.++|++||+++|.||++.+|...+... ....++-.+. |+  +++|.+ ..|..+
T Consensus       181 vi-~EPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~-~~~~~~v~PD-i~--~~gK~l-~gG~~~  254 (387)
T d1vefa1         181 VI-LEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRF-AFEHFGIVPD-IL--TLAKAL-GGGVPL  254 (387)
T ss_dssp             EE-ECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCS-EE--EECGGG-GTTSSC
T ss_pred             EE-EECCCCCCCCccCCHHHHHHHHHHHHHcCceEEecccccccCccCCCc-ccccCCcCCc-ee--eecccC-CCCccc
Confidence            55 456 4555654 778999999999999999999999999985544321 2222232223 33  368995 467888


Q ss_pred             EEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccchhhHHHHH--HHHHHHHHHHHHHHhhcCC
Q 019298          255 GWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLENFAGSCVPSYKLI  325 (343)
Q Consensus       255 G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~~~~~~~~~~L~~~  325 (343)
                      +.++...        ++.+.+.... ..+++.+|++.+++ .+.|+   .+.+  ..+++++.-+.+.+.|+.+
T Consensus       255 ~~~~~~~--------~~~~~~~~~~~g~T~~gnPla~aaa-~a~L~---~l~~~~~~~~v~~~g~~l~~~L~~l  316 (387)
T d1vefa1         255 GVAVMRE--------EVARSMPKGGHGTTFGGNPLAMAAG-VAAIR---YLERTRLWERAAELGPWFMEKLRAI  316 (387)
T ss_dssp             EEEEEEH--------HHHHTSCTTSSCCSSTTCHHHHHHH-HHHHH---HHHHHTTHHHHHHHHHHHHHHHHTS
T ss_pred             cccccce--------eeeeccccCCccccCCCCcchhhhc-ccchh---hcccccccchHhhhhHHHHHHHHhc
Confidence            8887742        4444443332 33567788888777 34332   2222  5566667777777777764

>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=99.44  E-value=9e-12  Score=111.28  Aligned_cols=289  Identities=13%  Similarity=0.027  Sum_probs=164.2

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC------CCCCHHHHHHHHHHHhhhCCCCCCCC--cEEE
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP------TAGLPLTRRAIAEYLSRDLPYKLTPN--DVFV  105 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~g~~~lr~~ia~~~~~~~~~~~~~~--~i~~  105 (343)
                      ....|+|--.+      .-.++.+++++...+.+....+||-      ..-..+++....+...+.|+.....-  +|-.
T Consensus        26 q~~~l~LiaSE------N~~S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~~~~a~w~vNVqp   99 (463)
T d2a7va1          26 QCRGLELIASE------NFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQP   99 (463)
T ss_dssp             HHHSEECCTTC------CCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTTEEEECCC
T ss_pred             HhcCeeEeccC------CcCCHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHHHHHHHhCCCchhccCCccc
Confidence            34557787666      2467888888877765433333332      11234555444444544454332211  3333


Q ss_pred             ecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH--------HHhcCc--eeEEeecCCCCCCCCCHHHHHhhhcC-Cc
Q 019298          106 TSGCTQAIDVAMALLSRPGANILLPRPGFPIYELS--------AAFRHI--EVRHFDLLPDKGWEVDLDDIESLADQ-NT  174 (343)
Q Consensus       106 ~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~--------~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~  174 (343)
                       .+++.|...++.+|++|||+|+..++..++...-        ....|.  +...+.+++ .+..+|.+++++..+. +|
T Consensus       100 -~SGs~An~av~~all~pgD~Im~l~l~~GGHlshg~~~~~~~~~~~g~~~~~~~Y~~d~-~~~~IDyd~~~~~a~~~kP  177 (463)
T d2a7va1         100 -YSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNP-KTGLIDYNQLALTARLFRP  177 (463)
T ss_dssp             -SSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCT-TTCSBCHHHHHHHHHHHCC
T ss_pred             -cccHHHHHHHHHHHcCCCceEEeeccCcCcccccccccccccccceeeEeeeeeeeccC-CCCcCcHHHHHHHHhhcCC
Confidence             4567788888999999999999887777554321        112222  334444444 3457999999997754 78


Q ss_pred             eEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCc-cccCCCCCCcccccCCCCCEEEEccCccccCCCCCc
Q 019298          175 VALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWR  253 (343)
Q Consensus       175 ~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r  253 (343)
                      ++|++....+|--.     +++++.++|.+-|.+++.|.+|.. |+-++.-+.++. +.+    ++.+|++|+  +.|.|
T Consensus       178 klIi~G~S~y~r~~-----d~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sP~~-~aD----vvt~tTHKT--lrGPr  245 (463)
T d2a7va1         178 RLIIAGTSAYARLI-----DYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK-HAD----IVTTTTHKT--LRGAR  245 (463)
T ss_dssp             SEEEECCSSCCSCC-----CHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG-TCS----EEEEESSGG--GCSCS
T ss_pred             ceEEeccccccccc-----CHHHHHHHhhcccceEEechhhhhHHhhhhhhcChhh-hhh----hhhchhhhh--hcCCC
Confidence            88877655555433     367777778899999999999985 444444344443 222    889999999  68889


Q ss_pred             EEEEEEeCCCCCC-------CchHHHHHHhhhh-ccccCcchHHHHHHHhccchh--hHHHHHHHHHHHHHHHHHHHhhc
Q 019298          254 LGWFVTTDPCGMF-------RKPKVVERMKKYF-DILGDPATFIQVCIMYGCLST--IMQIMIHGNFLENFAGSCVPSYK  323 (343)
Q Consensus       254 ~G~i~~~~~~~~~-------~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~~~~~~L~  323 (343)
                      -|.|++.++..-.       .+.++.+++.... ....+.+.....|+...++.+  ..++-+..+++.++...|.+.|.
T Consensus       246 gGiIl~~~~~~~~~~~~~~~~~~~~~~~i~~avFPg~qggph~h~iAa~Ava~~ea~~~~fk~Ya~qVv~NAk~La~~L~  325 (463)
T d2a7va1         246 SGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALL  325 (463)
T ss_dssp             CEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEcccccccccccCccchhHHHHHhhhhcCcccchhhhhhhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence            9999886531000       0013556665542 222222222222221333322  14555688889999999999999


Q ss_pred             CCCCceee-CCCCceEeeecC
Q 019298          324 LIPELINF-KSTGSSLKYLDL  343 (343)
Q Consensus       324 ~~~g~~~~-~~~~g~~~~~~l  343 (343)
                      +. |+.+. .......+++++
T Consensus       326 ~~-G~~vv~ggTdnHlvlvdl  345 (463)
T d2a7va1         326 ER-GYSLVSGGTDNHLVLVDL  345 (463)
T ss_dssp             HT-TCEEGGGSCSSSEEEEEC
T ss_pred             hC-CCeeecCCCCCceeeeec
Confidence            88 88853 445566666654

>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.43  E-value=1.8e-11  Score=109.59  Aligned_cols=194  Identities=11%  Similarity=0.050  Sum_probs=125.5

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCC--CCCCCcEEEecChHHHHHHHHHHhc---CCCC
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPY--KLTPNDVFVTSGCTQAIDVAMALLS---RPGA  125 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~--~~~~~~i~~~~g~~~al~~~~~~l~---~~gd  125 (343)
                      .+.+++++++|..    ...+.+.+  ...++-+.+.+-+++.++.  +.+++.|++|+|+|++++.++..+.   ++||
T Consensus        12 ~~v~~~V~~Am~~----~~~~hr~~--~f~~~~~~~~~~~r~~~~~~~~~~~~~i~~t~sgT~a~~~~~~~l~~~~~~gd   85 (382)
T d2bkwa1          12 IILSGAVQKALDV----PSLGHTSP--EFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNK   85 (382)
T ss_dssp             CCCCHHHHHTTSC----CCCCTTSH--HHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCC
T ss_pred             CCCCHHHHHHhCc----ccCCCCcH--HHHHHHHHHHHHHHHHHhhhcCCCCeEEEEeCcHHHHHHHHHHHHHHhcCCCC
Confidence            4567888776532    12223322  1122222233333333332  3456789999999999999999986   5799


Q ss_pred             eEEEeCCCCcch--HHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhc-CCceEEEEeCCCCCcccccCHHHHHHHHHHH
Q 019298          126 NILLPRPGFPIY--ELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLAD-QNTVALVIINPGNPCGNVYSYQHLQKLAETA  202 (343)
Q Consensus       126 ~vl~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~  202 (343)
                      +|++..-.+...  ...++..+.....+...+ .+...+.+.+++.+. .++++++++..+|.||...+.+.+.++++ +
T Consensus        86 ~vlv~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~~~~~~~~~~~-~  163 (382)
T d2bkwa1          86 NVLVVSTGTFSDRFADCLRSYGAQVDVVRPLK-IGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIK-Q  163 (382)
T ss_dssp             EEEEECSSHHHHHHHHHHHHTTCEEEEECCSS-TTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHH-H
T ss_pred             ceEEEEechhhhhhhhhccccccccccccccC-CCCccchhHHHHHhhhccchheeeeeccccccccccchhhhhhcc-c
Confidence            999988777542  344566677776664332 444577888877664 46789999999999999987655544333 3


Q ss_pred             hhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCcccc-CCCCCcEEEEEEeC
Q 019298          203 NKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWFVTTD  261 (343)
Q Consensus       203 ~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~i~~~~  261 (343)
                      +.+++++++|.+++..    ..+..+..+   +-.+++.|-.|.+ |.+|  +|+++.+.
T Consensus       164 ~~~~~~~~vDa~qs~g----~~pid~~~~---giD~~~~s~~K~l~gP~G--~g~l~vs~  214 (382)
T d2bkwa1         164 TSPETFFVVDAVCSIG----CEEFEFDEW---GVDFALTASQKAIGAPAG--LSISLCSS  214 (382)
T ss_dssp             HCTTSEEEEECTTTTT----TSCCCTTTT---TCSEEEEESSSTTCCCSC--EEEEEECH
T ss_pred             cccceeeeeecccccc----ccccccccc---CeeEEeecccccCcCCCc--hhhhhccH
Confidence            3446999999999873    222233222   2338899999998 4577  78888853

>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.42  E-value=2.3e-11  Score=109.02  Aligned_cols=289  Identities=12%  Similarity=0.008  Sum_probs=177.8

Q ss_pred             ccceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC---CCCC---HHHHHHHHHHHhhhCCCCCCCCcE-EEe
Q 019298           34 EKKVISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGYAP---TAGL---PLTRRAIAEYLSRDLPYKLTPNDV-FVT  106 (343)
Q Consensus        34 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~---~~lr~~ia~~~~~~~~~~~~~~~i-~~~  106 (343)
                      ....|+|--.+      .-.++.+++++...+.+....+|+-   ..|.   .+++....+...+.|+..-+...+ +-.
T Consensus        30 q~~~l~LIaSE------N~~S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~~~~~~~~anVqp  103 (470)
T d1rv3a_          30 QRVGLELIASE------NFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQP  103 (470)
T ss_dssp             HHSSEECCTTC------CCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCC
T ss_pred             HHcCceEecCC------CcCCHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHHHHHHHhCCChhhccccccc
Confidence            34557887666      2467889888877765433323332   1232   344444444444445432222222 234


Q ss_pred             cChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHH----------HHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-Cce
Q 019298          107 SGCTQAIDVAMALLSRPGANILLPRPGFPIYELS----------AAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-NTV  175 (343)
Q Consensus       107 ~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~----------~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~  175 (343)
                      .+++.|...++.+|++|||+|+..+...++...-          +.....+...++++++ .+.+|.|++++..+. +|+
T Consensus       104 ~SGs~An~av~~all~pgD~im~~~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~v~~~-~~~IDyd~l~~~a~~~kPk  182 (470)
T d1rv3a_         104 YSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPD-TGYIDYDRLEENARLFHPK  182 (470)
T ss_dssp             SSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTT-TCSBCHHHHHHHHHHHCCS
T ss_pred             cCCccHHHHHHHHhcCCCCeEeeeccccCCcccccccccCCCcccccceeEeeEEEEecc-cCcccHHHHHHHHHhhCcc
Confidence            5678888889999999999999987766544221          1111246677777664 457999999997654 788


Q ss_pred             EEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCc-cccCCCCCCcccccCCCCCEEEEccCccccCCCCCcE
Q 019298          176 ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGH-LVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRL  254 (343)
Q Consensus       176 ~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~-~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~  254 (343)
                      +|++....+|-=.     +++++.++|.+.|.+++.|.+|.. |+-++.-+.++. +.+    ++.+|++|+  +.|.|-
T Consensus       183 lIi~G~S~y~r~~-----d~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sPl~-~aD----vvt~tTHKt--lrGPrg  250 (470)
T d1rv3a_         183 LIIAGTSCYSRNL-----DYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE-HCH----VVTTTTHKT--LRGCRA  250 (470)
T ss_dssp             EEEECCSSCCSCC-----CHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG-TCS----EEEEESSGG--GCCCSC
T ss_pred             eEeechhhccccC-----CHHHHHHHHhccCCeEEecchhhhhhccccccCChhh-eee----eeeeehhhh--ccCCcc
Confidence            8877555555432     367777778899999999999985 444444344443 222    899999999  678889


Q ss_pred             EEEEEeCCCCC-------CCchHHHHHHhhhh-ccccCcchHHHHHHHhccchh--hHHHHHHHHHHHHHHHHHHHhhcC
Q 019298          255 GWFVTTDPCGM-------FRKPKVVERMKKYF-DILGDPATFIQVCIMYGCLST--IMQIMIHGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       255 G~i~~~~~~~~-------~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l~~--~~~~l~~~~~~~~~~~~~~~~L~~  324 (343)
                      |.|++.++..-       ..+.++.+++.... ....+.+.....|+...++.+  ..++-+..+++.++...|.+.|.+
T Consensus       251 GiI~~~~~~~~~~~~~~~~~~~~~~~~i~~avFPg~qggph~~~IAa~Ava~~ea~~~~fk~Ya~qvv~NAk~La~~L~~  330 (470)
T d1rv3a_         251 GMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVE  330 (470)
T ss_dssp             EEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEccccccccccccchhHHHHHHHHhhhcCccccccchhhHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHh
Confidence            99988653100       00123666665553 222222222222221233332  245666888899999999999998


Q ss_pred             CCCceee-CCCCceEeeec
Q 019298          325 IPELINF-KSTGSSLKYLD  342 (343)
Q Consensus       325 ~~g~~~~-~~~~g~~~~~~  342 (343)
                      . |+.+. .......++++
T Consensus       331 ~-G~~v~~ggTdnHlvlvd  348 (470)
T d1rv3a_         331 L-GYKIVTGGSDNHLILVD  348 (470)
T ss_dssp             T-TCEEGGGSCSSSEEEEE
T ss_pred             C-CceeccCCCCCceEEEe
Confidence            7 88843 44556666655

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

Probab=99.40  E-value=1.3e-10  Score=105.37  Aligned_cols=271  Identities=15%  Similarity=0.078  Sum_probs=160.1

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      ++++++|+..|.-.  ..++ .+|++.+++++++.......+.. ...+.. ..+++.+....  +..-+.+++++++++
T Consensus        41 dG~~ylD~~~g~~~--~~lGh~~p~i~~Ai~~q~~~~~~~~~~~-~~~~~~-~~l~~~l~~~~--~~~~~~v~f~~sGse  114 (429)
T d1s0aa_          41 DGRRLVDGMSSWWA--AIHGYNHPQLNAAMKSQIDAMSHVMFGG-ITHAPA-IELCRKLVAMT--PQPLECVFLADSGSV  114 (429)
T ss_dssp             TSCEEEESSTTTTT--CTTCBSCHHHHHHHHHHHHHCSCCCCSS-EECHHH-HHHHHHHHHHS--CTTCCEEEEESSHHH
T ss_pred             CCCEEEECcccHHH--HhhcCCcHHHHHHHHHHHHhcCCcccCC-ccchHH-HHHHHHHHhhh--ccCcceeeecccccc
Confidence            37889999888643  2244 78999999999987642211111 122222 22333332222  334578999999999


Q ss_pred             HHHHHHHHhc-------CCCCeEEEeCCCCcchHHHHHhc-Cc-------------eeEEeecCC-CCCCC---CCHHHH
Q 019298          112 AIDVAMALLS-------RPGANILLPRPGFPIYELSAAFR-HI-------------EVRHFDLLP-DKGWE---VDLDDI  166 (343)
Q Consensus       112 al~~~~~~l~-------~~gd~vl~~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~-~~~~~---~d~~~l  166 (343)
                      |++.+++...       ....+|+...-+|++....+... +.             .....+... .....   -+++.+
T Consensus       115 A~e~A~k~ar~~~~~~g~~~~~ii~~~~~yHG~t~~a~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (429)
T d1s0aa_         115 AVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGF  194 (429)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHH
T ss_pred             chhhhhhhhhheeecccccccEEEEecCCccccchhhhhhcCCccccccccCccccccccccccccccccccchhhhhhh
Confidence            9999887753       23357888888886644333222 11             111111111 01111   234454


Q ss_pred             Hhhhc--CCceEEEEeCC--CCCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEc
Q 019298          167 ESLAD--QNTVALVIINP--GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLG  241 (343)
Q Consensus       167 ~~~~~--~~~~~i~~~~p--~nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~  241 (343)
                      ++.+.  .+..+.++..|  ++..|. ..+++.+++|.++|++||+++|.||++.++...+... ....++-.++++   
T Consensus       195 ~~~~~~~~~~iaavivEPi~~~~gg~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~-~~~~~~v~PDi~---  270 (429)
T d1s0aa_         195 ARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLF-ACEHAEIAPDIL---  270 (429)
T ss_dssp             HHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---
T ss_pred             hhhhhhcCCccceeeecceeccCCCccCCCHHHHHHHHHHHHHcCcceehhhcccccccccccc-ccccceeccccc---
Confidence            44332  23445555666  455555 5688999999999999999999999999985554322 222233223333   


Q ss_pred             cCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh------hccccCcchHHHHHHHhccchhhHHHHH--HHHHHHH
Q 019298          242 SLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY------FDILGDPATFIQVCIMYGCLSTIMQIMI--HGNFLEN  313 (343)
Q Consensus       242 S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~a~~~~~l~~~~~~l~--~~~~~~~  313 (343)
                      +++|.++..+..+|.+++.        +++.+.+...      ...++..++++.+++ .+.|+   .+.+  ..++.++
T Consensus       271 ~~gK~l~gG~~p~~av~~~--------~~i~~~~~~~~~~~~~~~~T~~gnp~~~aaa-~a~L~---~i~~~~~~~~~~~  338 (429)
T d1s0aa_         271 CLGKALTGGTMTLSATLTT--------REVAETISNGEAGCFMHGPTFMGNPLACAAA-NASLA---ILESGDWQQQVAD  338 (429)
T ss_dssp             EECGGGGTSSSCCEEEEEC--------HHHHHHHHTSTTSSCSCCCTTTTCHHHHHHH-HHHHH---HHHTCHHHHHHHH
T ss_pred             ccccccccccccccchhhH--------HHHHhccCCCCCcceeecCCCCCCcccchhh-hcccc---ccccccccchhhH
Confidence            3689977777999999985        3676666432      123556677777777 33332   1111  5666666


Q ss_pred             HHHHHHHhhcCC
Q 019298          314 FAGSCVPSYKLI  325 (343)
Q Consensus       314 ~~~~~~~~L~~~  325 (343)
                      .-+.+.+.|+++
T Consensus       339 ~g~~l~~~L~~l  350 (429)
T d1s0aa_         339 IEVQLREQLAPA  350 (429)
T ss_dssp             HHHHHHHHHGGG
T ss_pred             HHHHHHHHHHHh
Confidence            666666666543

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

Probab=99.37  E-value=6.6e-11  Score=106.62  Aligned_cols=244  Identities=16%  Similarity=0.098  Sum_probs=142.1

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      +++..+||..|.-.  ..++ .+|++.+++++++.+..   |..........+.+++.+....    ..+.+.++.++++
T Consensus        37 dG~~ylD~~~g~~~--~~lGh~~p~v~~Ai~~q~~~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~sgs~  107 (404)
T d1z7da1          37 NDKRYYDFLSAYSS--VNQGHCHPNILNAMINQAKNLT---ICSRAFFSVPLGICERYLTNLL----GYDKVLMMNTGAE  107 (404)
T ss_dssp             TCCEEEESSHHHHT--TTTCBTCHHHHHHHHHHHTTCS---CCCTTSEEHHHHHHHHHHHHHH----TCSEEEEESSHHH
T ss_pred             CCCEEEEccccHHH--HhhhcCcHHHHHHHHHHHHhCC---CcccccchHHHHHHHHhhhhcc----ccceeeeeccccc
Confidence            38899999887533  2244 68999999999987532   2211112222333333333311    4578899999999


Q ss_pred             HHHHHHHHhc----------CCCCeEEEeCCCCcchHHHHHhcCceeE----EeecCCCC--CCCCCHHHHHhhhcCCce
Q 019298          112 AIDVAMALLS----------RPGANILLPRPGFPIYELSAAFRHIEVR----HFDLLPDK--GWEVDLDDIESLADQNTV  175 (343)
Q Consensus       112 al~~~~~~l~----------~~gd~vl~~~p~~~~~~~~~~~~g~~~~----~~~~~~~~--~~~~d~~~l~~~~~~~~~  175 (343)
                      +...+++...          .....++...-+|...............    ..+..+..  ...-+.+.++..+.++..
T Consensus       108 a~~~a~k~ar~~~~~~~~~~~~~~~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i  187 (404)
T d1z7da1         108 ANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYDDLEALEEELKDPNV  187 (404)
T ss_dssp             HHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECTTCHHHHHHHHTSTTE
T ss_pred             hHHHHHHHHHHHHhhcccccccccccccccccCCCCcccccccccccccccCCCCCCccccccccchHHHHHHHhcCCCE
Confidence            9999887652          1224677777777654433322211100    00000000  001256777777776655


Q ss_pred             EEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCc
Q 019298          176 ALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWR  253 (343)
Q Consensus       176 ~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r  253 (343)
                      +.++.-| ....|.. .+++.+++|.++|++||+++|+||++.+|...+.. .....++-.+. |+  +++|.++..+..
T Consensus       188 Aavi~EPi~g~~G~~~~~~~fl~~l~~lc~~~g~llI~DEV~tGfgRtG~~-~~~e~~gv~PD-iv--t~gK~l~gG~~p  263 (404)
T d1z7da1         188 CAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKL-LCVHHYNVKPD-VI--LLGKALSGGHYP  263 (404)
T ss_dssp             EEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-SGGGGGTCCCS-EE--EECGGGGTTSSC
T ss_pred             EEEEEEEEcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccCCCccccc-ccccccCCCCC-EE--EEcccccCCCCC
Confidence            6666677 5566766 56678999999999999999999999987544432 22233332233 33  679997765588


Q ss_pred             EEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccc
Q 019298          254 LGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCL  298 (343)
Q Consensus       254 ~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l  298 (343)
                      +|.+++++        ++.+.++... ..+++.+|++.+++ .+.|
T Consensus       264 ~~~v~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa-~a~L  300 (404)
T d1z7da1         264 ISAVLAND--------DIMLVIKPGEHGSTYGGNPLAASIC-VEAL  300 (404)
T ss_dssp             CEEEEECH--------HHHTTCCTTCCCCTTTTCHHHHHHH-HHHH
T ss_pred             cccccchH--------HHHccCCCCCcCcCCCCCcchhhhh-hhhh
Confidence            99999853        5555554442 23556788877777 4443

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

Probab=99.36  E-value=5.2e-11  Score=108.04  Aligned_cols=247  Identities=15%  Similarity=0.077  Sum_probs=145.2

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      ++++++||..|.-.  ..++ .+|.+.+++++++........  .....+....+++.+.+... +-..+.+++++++++
T Consensus        38 dG~~ylD~~~g~~~--~~lGh~~p~i~~ai~~q~~~~~~~~~--~~~~~~~~~~la~~l~~~~p-~~~~~~v~f~~sGse  112 (425)
T d1sffa_          38 EGREYLDFAGGIAV--LNTGHLHPKVVAAVEAQLKKLSHTCF--QVLAYEPYLELCEIMNQKVP-GDFAKKTLLVTTGSE  112 (425)
T ss_dssp             TCCEEEESSHHHHT--CTTCBTCHHHHHHHHHHTTTCSCCCT--TTEECHHHHHHHHHHHHHSS-CSSCEEEEEESSHHH
T ss_pred             CCCEEEEcCcCHHh--hcccCCcHHHHHHHHHHHhhcCCccc--ccccCcHHHHHHHHHHhhhh-hcccceeeeeccccc
Confidence            38899999887533  2244 789999999999875321111  11112344445555544221 112358899999999


Q ss_pred             HHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhc-Cce-------------eEEeec--CCCCCCCCC----HHHHHhh
Q 019298          112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFR-HIE-------------VRHFDL--LPDKGWEVD----LDDIESL  169 (343)
Q Consensus       112 al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~-g~~-------------~~~~~~--~~~~~~~~d----~~~l~~~  169 (343)
                      +...+++...  ....+|+...-+|++....+... |..             ....+.  ...+.....    .+.+...
T Consensus       113 A~e~Alk~ar~~t~r~~ii~~~~~yHG~t~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (425)
T d1sffa_         113 AVENAVKIARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKN  192 (425)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHhhhhhcccceEeecCCCcCccccchhhcCCCCcccCCcccccCCccccCCccccccccchhhHHHHHHHHHh
Confidence            9999988763  12367888888887765544432 211             111111  001110000    1111111


Q ss_pred             h-cCCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccc
Q 019298          170 A-DQNTVALVIINP-GNPCGN-VYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKR  246 (343)
Q Consensus       170 ~-~~~~~~i~~~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~  246 (343)
                      . .....+.++..| ....|. ..+.+.++.|.++|++||+++|.||++.++...+... ....++-.+. |+  +++|.
T Consensus       193 ~~~~~~vaavi~EPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gR~g~~~-a~~~~gv~PD-i~--~~gK~  268 (425)
T d1sffa_         193 DAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLF-AMEQMGVAPD-LT--TFAKS  268 (425)
T ss_dssp             TCCGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTSCCS-EE--EECGG
T ss_pred             cccccceEEEEecCccCCCCcccCCHHHHHHHHHHHHHcCceEEeccccccCCCcchhh-HHHhcCCCcc-ce--ecccc
Confidence            1 123345566666 444565 4788999999999999999999999999865444321 2222222222 33  37999


Q ss_pred             cCCCCCcEEEEEEeCCCCCCCchHHHHHHhhhh-ccccCcchHHHHHHHhccc
Q 019298          247 WIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYF-DILGDPATFIQVCIMYGCL  298 (343)
Q Consensus       247 ~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~~l  298 (343)
                      ++ .|+.+|.+++++        ++.+.+.... ..+++.++++.+++ .+.|
T Consensus       269 l~-gG~P~~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa-~a~L  311 (425)
T d1sffa_         269 IA-GGFPLAGVTGRA--------EVMDAVAPGGLGGTYAGNPIACVAA-LEVL  311 (425)
T ss_dssp             GG-TSSCCEEEEEEH--------HHHTTSCTTSBCCSSSSCHHHHHHH-HHHH
T ss_pred             cC-CCcceEEEEEcH--------HHHHhhCCCCCCCCCCcCHHHHHHH-HHHH
Confidence            74 578999999863        5555544332 23567778887777 4443

>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Subgroup IV putative aspartate aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.29  E-value=5.8e-11  Score=104.81  Aligned_cols=184  Identities=21%  Similarity=0.212  Sum_probs=121.9

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHhcCCCCeEE
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAPT--AGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALLSRPGANIL  128 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~vl  128 (343)
                      .+.++.++++|.+.    ..+.+.+.  .-..+.++.+.+++      +.+.+.++++.|++.+++.++..++.+|++|+
T Consensus         9 ~~v~~~V~~am~~~----~~~hr~~~f~~i~~~~~~~l~~ll------~~~~~~i~~~gsgT~a~e~~~~nl~~~g~~vl   78 (348)
T d1iuga_           9 VRLHPKALEALARP----QLHHRTEAAREVFLKARGLLREAF------RTEGEVLILTGSGTLAMEALVKNLFAPGERVL   78 (348)
T ss_dssp             CCCCHHHHHHHHSC----CCCTTSHHHHHHHHHHHHHHHHHH------TCSSEEEEEESCHHHHHHHHHHHHCCTTCEEE
T ss_pred             CCCCHHHHHHhcCC----CCCCCCHHHHHHHHHHHHHHHHHh------CCCCCEEEEeCchHHHHHHHHHhcccccccce
Confidence            45778888876543    22222220  11233444445554      23556788899999999999999999999998


Q ss_pred             EeCCCCcc--hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhhc-
Q 019298          129 LPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKL-  205 (343)
Q Consensus       129 ~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~-  205 (343)
                      +..-.+.+  +...++.++..+..+.....  ..++.+.   ....+++.+++++..+.||...+.   +++.++|+++ 
T Consensus        79 v~~~G~f~~~~~~~a~~~~~~~~~~~~~~g--~~~~~~~---~~~~~~~~v~~~h~eTstG~~~~i---~~i~~~~~~~~  150 (348)
T d1iuga_          79 VPVYGKFSERFYEIALEAGLVVERLDYPYG--DTPRPED---VAKEGYAGLLLVHSETSTGALADL---PALARAFKEKN  150 (348)
T ss_dssp             EEECSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCTTT---SCCSSCSEEEEESEETTTTEECCH---HHHHHHHHHHC
T ss_pred             eecchHHHHHHHHHHHhcCcccccccccCC--Ccccccc---ccccCCCeeEEEecchhhhhhccH---HHHHHHHHhhh
Confidence            88777543  34466777888877765432  2334333   234578889999999999999775   5556666666 


Q ss_pred             -CcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCcccc-CCCCCcEEEEEEeC
Q 019298          206 -KTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRW-IVPGWRLGWFVTTD  261 (343)
Q Consensus       206 -~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~i~~~~  261 (343)
                       +.++++|.+.+...    .+..+....   -.+++.|..|.+ |.+|  +|+++.++
T Consensus       151 ~~~l~~vDavss~g~----~~i~~d~~~---iD~~~~~sqK~l~gppG--~~~v~~s~  199 (348)
T d1iuga_         151 PEGLVGADMVTSLLV----GEVALEAMG---VDAAASGSQKGLMCPPG--LGFVALSP  199 (348)
T ss_dssp             TTCEEEEECTTTBTT----BCCCSGGGT---CSEEEEESSSTTCCCSC--EEEEEECH
T ss_pred             ccceeechhhhcccc----ccccccccc---CCEEEeccccceecCCc--eeeeeech
Confidence             58899999887632    222232222   238888999998 6677  78888864

>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Dialkylglycine decarboxylase
species: Pseudomonas cepacia [TaxId: 292]

Probab=99.24  E-value=3.3e-10  Score=102.91  Aligned_cols=241  Identities=15%  Similarity=0.055  Sum_probs=142.2

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecChHH
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEKFNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQ  111 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  111 (343)
                      ++++++|+..|.-.  ..++ .+|++.++++++++....   .......+.+..+|+.+....  +-..+++++++++++
T Consensus        39 dG~~ylD~~~g~~~--~~lGh~~p~v~~ai~~q~~~~~~---~~~~~~~~~~~~la~~L~~~~--~~~~~~v~f~~sGse  111 (431)
T d1zoda1          39 DGRAILDFTSGQMS--AVLGHCHPEIVSVIGEYAGKLDH---LFSEMLSRPVVDLATRLANIT--PPGLDRALLLSTGAE  111 (431)
T ss_dssp             TCCEEEETTHHHHT--CTTCBTCHHHHHHHHHHHHHCCC---CCTTCCCHHHHHHHHHHHHHS--CTTCCEEEEESCHHH
T ss_pred             CCCEEEEcccCHHh--hhhcCCCHHHHHHHHHHHhhccc---cccccccHHHHHHHHHHHHhC--Ccccceeeecccccc
Confidence            38899999877522  2244 789999999999876421   111112233344555554322  124579999999999


Q ss_pred             HHHHHHHHhc--CCCCeEEEeCCCCcchHHHHHhcCce------------eEEeecCCCC-------CCCCC---HHHHH
Q 019298          112 AIDVAMALLS--RPGANILLPRPGFPIYELSAAFRHIE------------VRHFDLLPDK-------GWEVD---LDDIE  167 (343)
Q Consensus       112 al~~~~~~l~--~~gd~vl~~~p~~~~~~~~~~~~g~~------------~~~~~~~~~~-------~~~~d---~~~l~  167 (343)
                      |++.+++...  ...++|+...-+|.+....+...+..            ...++.....       ....+   ++.++
T Consensus       112 A~e~Alk~Ar~~t~r~~i~~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (431)
T d1zoda1         112 SNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAF  191 (431)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHH
T ss_pred             hHHHHHHHHHHhcCCcceeecccccccccchhhcccccccccccCCcccCceeeeeecccccccccccchhhhhhHHHHH
Confidence            9999998752  23468888888887765544433211            1111111000       00011   22332


Q ss_pred             hhh---cCCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEcc
Q 019298          168 SLA---DQNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGS  242 (343)
Q Consensus       168 ~~~---~~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S  242 (343)
                      ..+   ..+..+.++..| ....|.. .+++.+++|.++|++||+++|.||++.++...+... ....++-.+. |+  +
T Consensus       192 ~~~~~~~~~~iAavi~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~gRtG~~~-~~~~~gv~PD-i~--~  267 (431)
T d1zoda1         192 DLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMF-ACQRDGVTPD-IL--T  267 (431)
T ss_dssp             HHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCS-EE--E
T ss_pred             HHHHHhccccccceeeccccccCCccCCCHHHHHHHHHHHHhcCceEEecccccccccccccc-ccccCCCCcc-hh--c
Confidence            222   223445566677 3334554 688999999999999999999999999876555432 2222222223 33  3


Q ss_pred             CccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh---hccccCcchHHHHHH
Q 019298          243 LSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY---FDILGDPATFIQVCI  293 (343)
Q Consensus       243 ~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~a~  293 (343)
                      ++|.+ ..|..++.+++.+        ++.+.....   ...+++.++++.+++
T Consensus       268 ~gK~l-~gG~p~~av~~~~--------~~~~~~~~~~~~~~~T~~g~pl~~aaa  312 (431)
T d1zoda1         268 LSKTL-GAGLPLAAIVTSA--------AIEERAHELGYLFYTTHVSDPLPAAVG  312 (431)
T ss_dssp             ECHHH-HTTSSCEEEEECH--------HHHHHHHHTTCCCCCTTTTCHHHHHHH
T ss_pred             ccccc-ccccccceeeeee--------cchhhhhcccccccCCCCCCcchHHHH
Confidence            68984 4667888887743        454544332   223556777776666

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=99.18  E-value=4.3e-10  Score=100.10  Aligned_cols=186  Identities=16%  Similarity=0.122  Sum_probs=122.1

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEecChHHHHHHHHHHhcCCCCeE
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAP--TAGLPLTRRAIAEYLSRDLPYKLT-PNDVFVTSGCTQAIDVAMALLSRPGANI  127 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~~~~~~~~~~~-~~~i~~~~g~~~al~~~~~~l~~~gd~v  127 (343)
                      .+.++.++++|...    ..+.+..  ..-..+.|+.+++++      +.+ ...|+++.|++.+++.++..+..+|+++
T Consensus        27 ~~v~~~Vl~am~~~----~~~hr~~ef~~i~~~~r~~l~~ll------~~~~~~~i~~~g~gT~~~~~~~~~~~~~~~~~   96 (377)
T d1vjoa_          27 SNAHPSVLQAMNVS----PVGHLDPAFLALMDEIQSLLRYVW------QTENPLTIAVSGTGTAAMEATIANAVEPGDVV   96 (377)
T ss_dssp             CCCCHHHHHHHSSC----CCCTTSHHHHHHHHHHHHHHHHHH------TCCCSCEEEESSCHHHHHHHHHHHHCCTTCEE
T ss_pred             CCCCHHHHHHhCcC----CCCCCCHHHHHHHHHHHHHHHHHh------CCCCCeEEEEcCcHHHHHHHHHHhcccccccc
Confidence            45778887776432    2333332  112355666677676      333 3477778889999999999999999999


Q ss_pred             EEeCCCCcch--HHHHHhcCceeEEeecCCCCCCCCCHHHHHh-hhcCCceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298          128 LLPRPGFPIY--ELSAAFRHIEVRHFDLLPDKGWEVDLDDIES-LADQNTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (343)
Q Consensus       128 l~~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~-~~~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~  204 (343)
                      ++..-.+...  .......+.....+....  +...+.+..+. ..+..++++.+++.+|.||...+   +++++++|++
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~tg~~~~---i~~i~~~~~~  171 (377)
T d1vjoa_          97 LIGVAGYFGNRLVDMAGRYGADVRTISKPW--GEVFSLEELRTALETHRPAILALVHAETSTGARQP---LEGVGELCRE  171 (377)
T ss_dssp             EEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred             ceeeechhhhhhhhhhhhhcccccccccCC--CCcccchhhhhhhhcCcceeeeeeeeeccceeeec---hhhhhhhhhh
Confidence            8887776543  233444555555554432  22345555544 34557888889998999999954   6788888889


Q ss_pred             cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298          205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT  259 (343)
Q Consensus       205 ~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~  259 (343)
                      +|.++++|.+++...    ....+   +..+-.+++.|..|.++.++ .+|++..
T Consensus       172 ~g~~~~vDa~~~~g~----~~~~~---~~~~~d~~~~s~~K~~~gp~-g~~~~~~  218 (377)
T d1vjoa_         172 FGTLLLVDTVTSLGG----VPIFL---DAWGVDLAYSCSQKGLGCSP-GASPFTM  218 (377)
T ss_dssp             HTCEEEEECTTTTTT----SCCCT---TTTTCSEEECCSSSTTCSCS-SCEEEEE
T ss_pred             ccceEEEecchhhhh----hhhcc---cccccceeeecccccccCCC-EEEEecc
Confidence            999999999997522    11222   22233488889999865543 2555555

>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 3-hydroxykynurenine transaminase
species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]

Probab=99.13  E-value=9.8e-10  Score=98.18  Aligned_cols=186  Identities=11%  Similarity=0.112  Sum_probs=124.0

Q ss_pred             CCCcHHHHHHHHHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEecChHHHHHHHHHHhcCCCCeE
Q 019298           51 FHTTHVATEAVAEALLSEKFNGYAP--TAGLPLTRRAIAEYLSRDLPYKLTPN-DVFVTSGCTQAIDVAMALLSRPGANI  127 (343)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~v  127 (343)
                      ...+++++++|.+    ...+.+..  ..-..+.|+.+++++      +++.. .|+++.|++.+++.++..+..+|++|
T Consensus        26 ~~~~~~V~~Am~~----~~~~hr~~ef~~i~~~~r~~L~~ll------~~~~~~~i~~~gsgT~a~ea~~~~l~~~~~~v   95 (388)
T d2ch1a1          26 SNCSKRVLTAMTN----TVLSNFHAELFRTMDEVKDGLRYIF------QTENRATMCVSGSAHAGMEAMLSNLLEEGDRV   95 (388)
T ss_dssp             CCCCHHHHHHTTS----CCCCTTCHHHHHHHHHHHHHHHHHH------TCCCSCEEEESSCHHHHHHHHHHHHCCTTCEE
T ss_pred             CCCCHHHHHHhCc----CCCCCCCHHHHHHHHHHHHHHHHHh------CCCCCeEEEEcCcHHHHHHHHHHHhccccccc
Confidence            3457888776532    22333432  112345666777776      23444 45567789999999999999999999


Q ss_pred             EEeCCCCcchH--HHHHhcCceeEEeecCCCCCCCCCHHHHHhhh-cCCceEEEEeCCCCCcccccCHHHHHHHHHHHhh
Q 019298          128 LLPRPGFPIYE--LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLA-DQNTVALVIINPGNPCGNVYSYQHLQKLAETANK  204 (343)
Q Consensus       128 l~~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~-~~~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~  204 (343)
                      ++..-.+.+..  ..+...+.....+...+  +...+.+..++.. ..+++++++++.+|.||...+   +++++++|++
T Consensus        96 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~t~tG~~~~---~~~i~~~~~~  170 (388)
T d2ch1a1          96 LIAVNGIWAERAVEMSERYGADVRTIEGPP--DRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP---LEGVGQICHQ  170 (388)
T ss_dssp             EEEESSHHHHHHHHHHHHTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred             cccccccccccchhhhhhhccccccccccc--ccccchhhhhhhhccCCcceeeeeecccccccccc---hhhhcchhcc
Confidence            98877775543  33555677777666543  3346666666654 447889999999999999965   4666778889


Q ss_pred             cCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCC-CCCcEEEEEEe
Q 019298          205 LKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV-PGWRLGWFVTT  260 (343)
Q Consensus       205 ~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~-~G~r~G~i~~~  260 (343)
                      ++.++++|.+++...    .+..+   +..+-.+++.|-.|.++. +|  +|++..+
T Consensus       171 ~~~~~~vD~~ss~g~----~pid~---~~~~~d~~~~s~~K~~~gp~G--~g~~~~~  218 (388)
T d2ch1a1         171 HDCLLIVDAVASLCG----VPFYM---DKWEIDAVYTGAQKVLGAPPG--ITPISIS  218 (388)
T ss_dssp             TTCEEEEECTTTBTT----BCCCT---TTTTCCEEECCCC-CCCCCSS--CEEEEEC
T ss_pred             ccceeeeeeeecccc----cccch---hccCceEEEEccccccCCCCe--EEEEecc
Confidence            999999999998732    22222   223344888899998755 44  5666653

>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.11  E-value=1.2e-09  Score=99.87  Aligned_cols=265  Identities=14%  Similarity=0.040  Sum_probs=144.7

Q ss_pred             cccceeEeccCCCCCCCCCC-CcHHHHHHHHHHHhcCC---CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEecC
Q 019298           33 NEKKVISLAMGDPTVHSCFH-TTHVATEAVAEALLSEK---FNGYAPTAGLPLTRRAIAEYLSRDLPYKLTPNDVFVTSG  108 (343)
Q Consensus        33 ~~~~~i~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g  108 (343)
                      ++++++||..|.-.  ..++ .+|++.+++++++....   ...+.. .....+.+.+++.+....  +-..+.++++++
T Consensus        51 dG~~ylD~~~g~~~--~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~-~~~~~~a~~lae~l~~~~--~~~~~~v~f~~s  125 (461)
T d1ohwa_          51 DGNRMLDLYSQISS--IPIGYSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVA--PKGMSQLITMAC  125 (461)
T ss_dssp             TSCEEEESSHHHHT--CSSCBTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGC--CTTCCEEEEESS
T ss_pred             CCCEEEEcccCHHH--HhhcCCcHHHHHHHHHHHhhhhhcccccccc-cchHHHHHHHHHHHHhhh--ccCcceeeeecc
Confidence            38889999776533  1233 67899999988765321   111111 122346667777664322  224568999999


Q ss_pred             hHHHHHHHHHHhc----------------------------CCCCeEEEeCCCCcchHHHHHhc-Cce------------
Q 019298          109 CTQAIDVAMALLS----------------------------RPGANILLPRPGFPIYELSAAFR-HIE------------  147 (343)
Q Consensus       109 ~~~al~~~~~~l~----------------------------~~gd~vl~~~p~~~~~~~~~~~~-g~~------------  147 (343)
                      +++|++.+++...                            .+...|+...-+|++....+... |..            
T Consensus       126 GseAve~Aik~Ar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~~~~syHG~t~~a~s~tg~~~~~~~~~~~~~~  205 (461)
T d1ohwa_         126 GSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDW  205 (461)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHTCCSCHHHHTTCCCCCC
T ss_pred             hhhhhHHHHHHHHHHhhhcccCcccccchhhhhhhhccccCCCCceEEEecCCcCCCCcccccccCCcccccccccccCC
Confidence            9999999987642                            12347888888887654433332 211            


Q ss_pred             -eEEeecCCCC-C---------CCCCHHHHHhhhc-----CCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHhhcCcEE
Q 019298          148 -VRHFDLLPDK-G---------WEVDLDDIESLAD-----QNTVALVIINP-GNPCGNV-YSYQHLQKLAETANKLKTLV  209 (343)
Q Consensus       148 -~~~~~~~~~~-~---------~~~d~~~l~~~~~-----~~~~~i~~~~p-~nptG~~-~~~~~l~~l~~~~~~~~~~~  209 (343)
                       ....+..... .         ...+.+.+++.+.     .+..+.++.-| +...|.. .+++.+++|.++|++||+++
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPi~g~~G~~~~~~~fl~~lr~lc~~~gill  285 (461)
T d1ohwa_         206 PIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAF  285 (461)
T ss_dssp             CEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEE
T ss_pred             cccccccccccccccccccchhhhhhHHHHHHHHHHHHhCCCccceeeeccccccccccCchhhHHHHHHHHHHhhCcce
Confidence             1111000000 0         0012344444432     23344455556 5555544 78899999999999999999


Q ss_pred             EEccCCCccccCCCCCCcccccCC--CCCEEEEccCccccCCCCCcEEEEEEeCCCCCCCchHHHHHHhhh-hccccCcc
Q 019298          210 IADEVYGHLVFGDKPFVPMGVFGS--TVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPA  286 (343)
Q Consensus       210 i~D~ay~~~~~~~~~~~~~~~~~~--~~~~i~~~S~sK~~~~~G~r~G~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~  286 (343)
                      |.||++.++...|.- .....++-  ... ++  +++|.++.     |+.....         ........ ...++..+
T Consensus       286 I~DEV~tG~gRtG~~-~~~e~~gi~~~PD-iv--~~gK~l~~-----g~~~~~~---------~~~~~~~~~~~~T~~g~  347 (461)
T d1ohwa_         286 LVDEVQTGGGSTGKF-WAHEHWGLDDPAD-VM--TFSKKMMT-----GGFFHKE---------EFRPNAPYRIFNTWLGD  347 (461)
T ss_dssp             EEECTTTCSSTTSSS-SGGGGGCCSSCCS-EE--EECGGGSS-----EEEEECG---------GGSCSSTTSSCCSCSSC
T ss_pred             ecccccccccccccc-ccccccccccCch-hh--hhhhcccc-----ccccccc---------ccccccccccccccccc
Confidence            999999998655542 22222221  122 33  56898542     4444321         11111111 22245667


Q ss_pred             hHHHHHHHhccchhhHHHHH--HHHHHHHHHHHHHHhhcC
Q 019298          287 TFIQVCIMYGCLSTIMQIMI--HGNFLENFAGSCVPSYKL  324 (343)
Q Consensus       287 ~~~~~a~~~~~l~~~~~~l~--~~~~~~~~~~~~~~~L~~  324 (343)
                      +++.+++ .+.|+   .+.+  ..++.++..+.+.+.|++
T Consensus       348 p~~~aaa-~a~l~---~i~~~~l~~~~~~~g~~l~~~l~~  383 (461)
T d1ohwa_         348 PSKNLLL-AEVIN---IIKREDLLSNAAHAGKVLLTGLLD  383 (461)
T ss_dssp             HHHHHHH-HHHHH---HHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred             cccchhh-cccch---hhhhhhHHHHHHHHHHHHHHHHHH
Confidence            7766666 34332   1111  445555555555555543

>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]

Probab=98.69  E-value=1.1e-07  Score=83.66  Aligned_cols=187  Identities=11%  Similarity=-0.001  Sum_probs=113.2

Q ss_pred             eeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC--------CCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEe
Q 019298           37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSEK--------FNGYAP--TAGLPLTRRAIAEYLSRDLPYKLTPNDVFVT  106 (343)
Q Consensus        37 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~Y~~--~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~  106 (343)
                      ..||+-|=      ...+++++++|.+.+.+..        ++.-.+  ..-..+.|+.+++++    +.+ +...|+++
T Consensus         4 ~~~F~pGP------~~vp~~V~eam~~~~~~~~~~~~~~~~~sHRs~ef~~~~~~~r~~l~~l~----~~~-~~~~i~~~   72 (361)
T d2c0ra1           4 AYNFNAGP------AALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALL----GNP-TGYKVLFI   72 (361)
T ss_dssp             CEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHT----TCC-SSEEEEEE
T ss_pred             CcccCCCC------cCCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHh----CCC-CCCEEEEE
Confidence            45665442      5678999999998764310        000000  011134455555555    322 23377777


Q ss_pred             cCh-HHHHHHHHHHhcCCCCeEEEeCCCCc--chHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCC
Q 019298          107 SGC-TQAIDVAMALLSRPGANILLPRPGFP--IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPG  183 (343)
Q Consensus       107 ~g~-~~al~~~~~~l~~~gd~vl~~~p~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~  183 (343)
                      +|+ +.++..+...+..+|+++++..-...  .+...++..|..+..+.....  ...+++.+++.+...+. ..   .+
T Consensus        73 ~gs~t~~~ea~~~~l~~~~~~~l~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~---v~  146 (361)
T d2c0ra1          73 QGGASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIGDTHVAASSEAS--NYMTLPKLQEIQLQDNA-AY---LH  146 (361)
T ss_dssp             SSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHSCEEEEEECGGG--TTCSCCCGGGCCCCTTE-EE---EE
T ss_pred             CCCchHHHHHHHhccccCCCceEEEeechhhhhhhhhhhhcCceeeeeccccc--cccchhhhhhhcccCcc-eE---EE
Confidence            776 45556666677888888876653332  234566777888887766533  33666777776654442 22   34


Q ss_pred             CCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCC
Q 019298          184 NPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGW  252 (343)
Q Consensus       184 nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~  252 (343)
                      |.||...+   ++++.++|+++|+++++|.+.+...    .+..+..++     +.+.|.+|.++.+|.
T Consensus       147 ~~tg~~~~---~~~i~~~~~~~~al~~vDavss~g~----~~id~~~~d-----i~~~s~~k~~~~~~~  203 (361)
T d2c0ra1         147 LTSNETIE---GAQFKAFPDTGSVPLIGDMSSDILS----RPFDLNQFG-----LVYAGAQKNLGPSGV  203 (361)
T ss_dssp             EESEETTT---TEECSSCCCCTTSCEEEECTTTTTS----SCCCGGGCS-----EEEEETTTTTCCSSC
T ss_pred             Eeccccee---cceEEEeeccCCceEEEEeeccccc----cccccccce-----eEEEecccccccccC
Confidence            66777754   4567788999999999999998622    222232222     666788999988774

>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus alcalophilus [TaxId: 1445]

Probab=98.49  E-value=1.7e-07  Score=82.32  Aligned_cols=192  Identities=13%  Similarity=0.008  Sum_probs=109.3

Q ss_pred             ceeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCC---------CCHHHHHHHHHHHhhhCCCCCCCC-cEE
Q 019298           36 KVISLAMGDPTVHSCFHTTHVATEAVAEALLSEK-FNGYAPTA---------GLPLTRRAIAEYLSRDLPYKLTPN-DVF  104 (343)
Q Consensus        36 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~---------g~~~lr~~ia~~~~~~~~~~~~~~-~i~  104 (343)
                      ++.||+-|-      .+.|+++.++|.+.+.+-. ........         -..+.|+.+++++      +.+.+ .|+
T Consensus         3 ~~~nF~pGP------~~~p~~V~~a~~~~~~~~~~~~~~~~~~sHRs~~~~~~~~~~r~~l~~l~------~~~~~~~i~   70 (360)
T d1w23a_           3 QVFNFNAGP------SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELL------QIPNDYQIL   70 (360)
T ss_dssp             CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHH------TCCTTEEEE
T ss_pred             ceeEeCCCC------cCCCHHHHHHHHHHHHhhcccCccccccCcCCHHHHHHHHHHHHHHHHHh------CCCCCCEEE
Confidence            455677663      4578999999998764210 00000000         1245778888888      34444 577


Q ss_pred             EecChHHHHHHHHHH-hcCCCCeEEEeCCCCcc--hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeC
Q 019298          105 VTSGCTQAIDVAMAL-LSRPGANILLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIIN  181 (343)
Q Consensus       105 ~~~g~~~al~~~~~~-l~~~gd~vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~  181 (343)
                      +++|++++...+... +..+++++++....+..  +...+...+...........  ...+++.++....... .   ..
T Consensus        71 ~~~gt~~~~~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~---~~  144 (360)
T d1w23a_          71 FLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLGETHIAASTKAN--SYQSIPDFSEFQLNEN-D---AY  144 (360)
T ss_dssp             EESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHTTSEEEEEEECGGG--TSCSCCCGGGCCCCTT-E---EE
T ss_pred             EeCCcHHHHHHHHHhhhcccCcccceeeccchhhhhHHHHHHhhhcceeeccccc--cccchhhhhhcccccc-c---ce
Confidence            788876666654444 45677888777655433  33344545555555443321  1233444444333222 2   23


Q ss_pred             CCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEE
Q 019298          182 PGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV  258 (343)
Q Consensus       182 p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~  258 (343)
                      ..|-||...   +++++.++|+++|+++|+|.+.+...    .+..+..++     +.+.|++|-++++|. .|+++
T Consensus       145 ~~~~tg~~~---~~~~i~~~~~~~g~l~ivDavqs~g~----~~id~~~~~-----vd~~~~~~~k~~~~~-~~~~~  208 (360)
T d1w23a_         145 LHITSNNTI---YGTQYQNFPEINHAPLIADMSSDILS----RPLKVNQFG-----MIYAGAQKNLGPSGV-TVVIV  208 (360)
T ss_dssp             EEEESEETT---TTEECSSCCCCCSSCEEEECTTTTTS----SCCCGGGCS-----EEEEETTTTTSCTTC-EEEEE
T ss_pred             eEecCCccc---cceeeeeccccceeeEEeeccccccc----ccccccccc-----ceEEeeccccccCCc-ceeeE
Confidence            345677774   45678889999999999999998733    222333322     556677777666553 34443

>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Escherichia coli [TaxId: 562]

Probab=98.35  E-value=1.3e-06  Score=76.31  Aligned_cols=194  Identities=10%  Similarity=-0.078  Sum_probs=114.9

Q ss_pred             eeEeccCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC-----CC-C----CCCHHHHHHHHHHHhhhCCCCCCC-CcEEE
Q 019298           37 VISLAMGDPTVHSCFHTTHVATEAVAEALLSEKFNGY-----AP-T----AGLPLTRRAIAEYLSRDLPYKLTP-NDVFV  105 (343)
Q Consensus        37 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y-----~~-~----~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~  105 (343)
                      +.||+-|-      ...+++++++|.+.+.+-...+.     .- .    .-..+.|+.++++++      .+. +.|++
T Consensus         2 ~~nF~pGP------~~~p~~Vl~a~~~~~~~~~~~~~~~~~~sHRs~ef~~l~~~~r~~l~~l~~------~~~~~~v~~   69 (360)
T d1bjna_           2 IFNFSSGP------AMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLN------VPSNYKVLF   69 (360)
T ss_dssp             CEECCSSS------CCCCHHHHHHHHHTSSSGGGSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHT------CCTTEEEEE
T ss_pred             eEEeCCCC------cCCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhC------CCCCCEEEE
Confidence            45665542      45789999999997653110000     00 0    113567777777773      333 37788


Q ss_pred             ecChHHHHHHHHH-HhcCCCCeEEEeCCCCcc--hHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCC
Q 019298          106 TSGCTQAIDVAMA-LLSRPGANILLPRPGFPI--YELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINP  182 (343)
Q Consensus       106 ~~g~~~al~~~~~-~l~~~gd~vl~~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p  182 (343)
                      ++|++++...+.. .+..+++.+++..-.+..  +...++..|..........  +...+.+.++..+..++++++++..
T Consensus        70 ~~gs~t~~~~a~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~v~~~  147 (360)
T d1bjna_          70 CHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVT--VDGLRAVKPMREWQLSDNAAYMHYC  147 (360)
T ss_dssp             ESSHHHHHHHHHHHHHCTTCCEEEEEESSHHHHHHHHHHTTTSEEEEEECEEE--ETTEEEECCGGGCCCCSSCSCEEEC
T ss_pred             ECCchHHHHhhhhhcccccccccceecccchhhhhHHHHhhcCccceeecccc--CCCcchhhhhhhhccCCceeEEEec
Confidence            8887666555544 456677788777655543  2334444555544443322  2234555666666777888888888


Q ss_pred             CCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCCCCCcEEEEEE
Q 019298          183 GNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVT  259 (343)
Q Consensus       183 ~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~i~~  259 (343)
                      +|-||...+..   ++  .++.++..+++|.+.+...    .  .+.   ..+-.+.+.|.+|.++.++. .|+++.
T Consensus       148 ~~~t~~~~~~~---~i--~~~~~~~~v~vDa~~~~~~----~--~vd---~~~~dv~~~ss~k~~~~~~~-~~~~~~  209 (360)
T d1bjna_         148 PNETIDGIAID---ET--PDFGADVVVAADFSSTILS----R--PID---VSRYGVIYAGAQKNIGPAGL-TIVIVR  209 (360)
T ss_dssp             SEETTTTEECC---CC--CCCCTTCCEEEECTTTTTS----S--CCC---GGGCSEEEEETTTTTSSTTC-EEEEEE
T ss_pred             ccccccCcccc---ce--ecccccceeeeeeeccccc----e--eee---eccceeEEEEcccccccCCC-ceeEee
Confidence            88888885443   22  3466789999998887632    1  111   11122788888999876654 344433

>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase (decarboxylating) subunit 1
species: Thermus thermophilus [TaxId: 274]

Probab=98.34  E-value=5.3e-05  Score=67.27  Aligned_cols=217  Identities=17%  Similarity=0.159  Sum_probs=120.5

Q ss_pred             CCCCcEEEecChHHHHHHHHHHhc-CCCCeEEEeCCCCcchHH----HHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC
Q 019298           98 LTPNDVFVTSGCTQAIDVAMALLS-RPGANILLPRPGFPIYEL----SAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ  172 (343)
Q Consensus        98 ~~~~~i~~~~g~~~al~~~~~~l~-~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~  172 (343)
                      .+.-+.-...|++.....++.+.. ...+++++..-+++.+..    .+...|.+++.++.+..   ..+.++    +.+
T Consensus       123 md~~n~s~~~ga~a~~~~~~~~~~~~~~~~~~v~~~~~p~~~~v~~t~a~~~g~~vv~v~~~~~---~~~~~~----~~~  195 (437)
T d1wyua1         123 LEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPLEGG---RTPLPE----VGE  195 (437)
T ss_dssp             SSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECCBTT---BCCCCC----CCT
T ss_pred             CCccccCchHHHHHHHHHHHHHHhhhcccccccccccChHHhhhhhhhcccceeeEEeeecccc---cchhhh----hcc
Confidence            344455566677776666554442 245788999989876533    45667999998876432   223222    456


Q ss_pred             CceEEEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCC---
Q 019298          173 NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV---  249 (343)
Q Consensus       173 ~~~~i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~---  249 (343)
                      ++.++++.+||. .|..   ++++++++++++.|.+++.|..-..+  ..-  .+...++-   .|++++ +|.||.   
T Consensus       196 ~~Aavmi~~Pnt-~G~~---ed~~~i~~~~h~~G~l~~~~ad~~al--~~l--~~Pg~~Ga---Di~~g~-~q~fg~p~g  263 (437)
T d1wyua1         196 EVGAVVVQNPNF-LGAL---EDLGPFAEAAHGAGALFVAVADPLSL--GVL--KPPGAYGA---DIAVGD-GQSLGLPMG  263 (437)
T ss_dssp             TEEEEEEESSCT-TSBC---CCHHHHHHHHHHTTCEEEEECCTTGG--GTB--CCHHHHTC---SEEEEE-CTTTTCCCG
T ss_pred             ceeEEEEccccc-cccc---cchHHHHHHhhhccceEEeeechhhh--hcc--cccccccc---ceEeec-cceeccccC
Confidence            788889999955 6888   56899999999999987776432221  111  11222222   277776 665544   


Q ss_pred             -CCCcEEEEEEeCCCCCC----------------------Cc-hHHHHHHhhhhccccCcchHHHHHHHhccchhhHHHH
Q 019298          250 -PGWRLGWFVTTDPCGMF----------------------RK-PKVVERMKKYFDILGDPATFIQVCIMYGCLSTIMQIM  305 (343)
Q Consensus       250 -~G~r~G~i~~~~~~~~~----------------------~~-~~~~~~l~~~~~~~~~~~~~~~~a~~~~~l~~~~~~l  305 (343)
                       .|...|++.+.+.-...                      +. ...+++-+...++..+....+..+..+..+--+.-+-
T Consensus       264 ~GGP~~G~~a~~~~l~r~lPgrivg~s~d~~G~~~~~l~lqtreqhIrRekatsnict~q~l~a~~a~~Y~~~lG~~GL~  343 (437)
T d1wyua1         264 FGGPHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLR  343 (437)
T ss_dssp             GGCSCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCccccccccchhhccccccccccccccCCcccceeecccccccccccccccchhhHHHHHHHHHHHHhhhcCcccHH
Confidence             34556887775421000                      00 0111111111111112222222222122222222233


Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCceeeCC
Q 019298          306 IHGNFLENFAGSCVPSYKLIPELINFKS  333 (343)
Q Consensus       306 ~~~~~~~~~~~~~~~~L~~~~g~~~~~~  333 (343)
                      +..++...+..++.+.|.+++|+....+
T Consensus       344 ~ia~~a~~~A~yl~~~L~~~~g~~~~~~  371 (437)
T d1wyua1         344 EVALKSVEMAHKLHALLLEVPGVRPFTP  371 (437)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSTTCEECSC
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCeeccCC
Confidence            3666777788889999999888875333

>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2 (P-protein) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase subunit 2 (P-protein)
species: Thermus thermophilus [TaxId: 274]

Probab=97.56  E-value=0.0051  Score=54.83  Aligned_cols=247  Identities=12%  Similarity=0.014  Sum_probs=133.8

Q ss_pred             CcHHHHHHHHHHHhcCCCCCCCCCCC---CH-------HHHHHHHHHHhhhCCCCCCCCcEEEecChHHHHHHHHHHh--
Q 019298           53 TTHVATEAVAEALLSEKFNGYAPTAG---LP-------LTRRAIAEYLSRDLPYKLTPNDVFVTSGCTQAIDVAMALL--  120 (343)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~Y~~~~g---~~-------~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~al~~~~~~l--  120 (343)
                      ..|.+.+.+.+.     +..|.|.+.   ..       ++...|+++.      +.+.-+.-.-.|++..-..++.+.  
T Consensus        77 y~P~v~~~~~~~-----~TaYTPYQPaEiSQG~LQalfEfQtmi~eLT------GMdvaNaS~yDGatA~aeA~~ma~r~  145 (471)
T d1wyub1          77 YNPKLHEEAARL-----FADLHPYQDPRTAQGALRLMWELGEYLKALT------GMDAITLEPAAGAHGELTGILIIRAY  145 (471)
T ss_dssp             CCCHHHHHHHHT-----TSSCCTTSCGGGCHHHHHHHHHHHHHHHHHH------TCSEEECCCSSHHHHHHHHHHHHHHH
T ss_pred             cCcchhhhHHHH-----HhccCCCCCHHHHHHHHHHHHHHHHHHHHHh------CCCccccccchHHHHHHHHHHHHHHH
Confidence            346666666543     345666442   12       3556666666      334334444566655544443332  


Q ss_pred             -cCCC----CeEEEeCCCCc-chHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceEEEEeCCCCCcccccCHHH
Q 019298          121 -SRPG----ANILLPRPGFP-IYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQH  194 (343)
Q Consensus       121 -~~~g----d~vl~~~p~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~nptG~~~~~~~  194 (343)
                       .+.+    ..+++..+.+. .........+..++.++..  .....+.+.+.....++...+++.+|++..+..   +.
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~a~v~v~~p~~~g~~e---~~  220 (471)
T d1wyub1         146 HEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSG--PEGEVDLEALKRELGPHVAALMLTNPNTLGLFE---RR  220 (471)
T ss_dssp             HHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBC--TTSSBCHHHHHHHCSTTEEEEEECSSCTTSCCC---TT
T ss_pred             hhhcccccccccccCCcccccceeeeeecccceeeccccc--ccccccchhhhhhhhccccceeeccCCCccccc---ch
Confidence             1222    24444555554 4444555566666666543  345678888888888788888899998877666   56


Q ss_pred             HHHHHHHHhhcCcEEEEccCCCccccCCCCCCcccccCCCCCEEEEccCccccCC----CCCcEEEEEEeCCCCCCCchH
Q 019298          195 LQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIV----PGWRLGWFVTTDPCGMFRKPK  270 (343)
Q Consensus       195 l~~l~~~~~~~~~~~i~D~ay~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~----~G~r~G~i~~~~~~~~~~~~~  270 (343)
                      .+++++++++.+..+++|-+-.....+-..+   ...   ...+++.+.++.||.    .|.-+|++.+.+        +
T Consensus       221 ~~~~~~~~h~~g~~~~~~~~~~~~~~~l~~p---~~~---g~div~vg~~q~~G~P~~~GGP~~G~~a~~~--------~  286 (471)
T d1wyub1         221 ILEISRLCKEAGVQLYYDGANLNAIMGWARP---GDM---GFDVVHLNLHKTFTVPHGGGGPGSGPVGVKA--------H  286 (471)
T ss_dssp             HHHHHHHHHHHTCEEEEEGGGGGGTTTTCCH---HHH---TCSEEECCTTTTTCCCCTTSCCCCCCEEECG--------G
T ss_pred             hhhhHHHHHhccccccccccchhhhhhcccc---Ccc---cccccccccccccccccccccccccceeehh--------h
Confidence            7788888889998888876644332111111   111   122555556665543    456678888753        2


Q ss_pred             HHHHHh-------------------hhhccccCcc-hH-HHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhhcCCCCce
Q 019298          271 VVERMK-------------------KYFDILGDPA-TF-IQVCIMYGCLSTIMQIMIHGNFLENFAGSCVPSYKLIPELI  329 (343)
Q Consensus       271 ~~~~l~-------------------~~~~~~~~~~-~~-~~~a~~~~~l~~~~~~l~~~~~~~~~~~~~~~~L~~~~g~~  329 (343)
                      +.+++-                   +.+....+.+ .+ +..+..+..+--+.-+-+..+...++..++.+.|+. +|+.
T Consensus       287 ~~R~~PGRiV~~~~~~~~~~~~REqhIrRe~actnqaL~al~A~vYlsllG~~GL~elA~~~~~~A~Yla~~L~~-~G~~  365 (471)
T d1wyub1         287 LAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKE-KGYR  365 (471)
T ss_dssp             GGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCB
T ss_pred             hhccCCCceecCCCccccccCCCcccccchhhhhhhHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHhh-cCce
Confidence            333221                   0010011222 22 222221222222333334777777888888888866 4777


Q ss_pred             e
Q 019298          330 N  330 (343)
Q Consensus       330 ~  330 (343)
                      +
T Consensus       366 ~  366 (471)
T d1wyub1         366 V  366 (471)
T ss_dssp             C
T ss_pred             e
Confidence            5

>d1ofux_ c.37.1.22 (X:) Hypothetical protein PA3008 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Bacterial cell division inhibitor SulA
domain: Hypothetical protein PA3008
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.98  E-value=2  Score=29.65  Aligned_cols=104  Identities=12%  Similarity=-0.003  Sum_probs=63.8

Q ss_pred             cEEEecChHHHHHHHHHHh---cCC--CCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcCCceE
Q 019298          102 DVFVTSGCTQAIDVAMALL---SRP--GANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVA  176 (343)
Q Consensus       102 ~i~~~~g~~~al~~~~~~l---~~~--gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~  176 (343)
                      ++.....+.+.+..++-.|   ...  +.-|+...|-+..|.......|++...+-.-...+..=.+..+|++++.+...
T Consensus         6 el~~~~~~~~~l~LL~P~L~~l~~~~~~rwi~wI~Pp~~p~a~~L~~~Gi~~~rll~v~~~~~~d~lwa~EqaL~sg~~~   85 (119)
T d1ofux_           6 ELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGRSH   85 (119)
T ss_dssp             EEEEESCHHHHHHHHHHHHHHHTTCSSSSEEEEESCCTTSCHHHHHHTTCCTTSEEEECCSSHHHHHHHHHHHHHHTCEE
T ss_pred             eecccCCcHHHHHHHHHHHHHHHhcCCCcEEEEEcCCCccCHHHHHHcCCCCCeEEEEeCCChHHHHHHHHHHHhcCCcc
Confidence            3444444555455554443   333  33477778888889998999998644332221111111255577788878777


Q ss_pred             EEEeCCCCCcccccCHHHHHHHHHHHhhcCcEEE
Q 019298          177 LVIINPGNPCGNVYSYQHLQKLAETANKLKTLVI  210 (343)
Q Consensus       177 i~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~i  210 (343)
                      .++..+.+     ++.++++++--.|++.+...+
T Consensus        86 aVl~w~~~-----l~~~~~RRLqlAA~~g~t~~~  114 (119)
T d1ofux_          86 TVVSWLEP-----LSRAARKQLSRAAQLGQAQSL  114 (119)
T ss_dssp             EEEECCSS-----CCHHHHHHHHHHHHHHTCEEE
T ss_pred             EEEEcCCC-----CChHHHHHHHHHHHhcCCEEE
Confidence            77776643     556788888888888776654

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=84.09  E-value=3.9  Score=31.93  Aligned_cols=96  Identities=15%  Similarity=0.124  Sum_probs=53.9

Q ss_pred             CcEEEecChHHHHH-HHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-----Cc
Q 019298          101 NDVFVTSGCTQAID-VAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-----NT  174 (343)
Q Consensus       101 ~~i~~~~g~~~al~-~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-----~~  174 (343)
                      +.+++.+|++.+|- .+.+.|.+.|.+|++..-.-..........+.+...+..+-     -|.+++++.++.     ..
T Consensus         6 gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~   80 (244)
T d1nffa_           6 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDV-----TQPAQWKAAVDTAVTAFGG   80 (244)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCT-----TCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeec-----CCHHHHHHHHHHHHHHhCC
Confidence            34544445555554 45566778998888776555555556666666666666543     245555554432     23


Q ss_pred             eEEEEeCC-CCCcccc--cCHHHHHHHHHH
Q 019298          175 VALVIINP-GNPCGNV--YSYQHLQKLAET  201 (343)
Q Consensus       175 ~~i~~~~p-~nptG~~--~~~~~l~~l~~~  201 (343)
                      .-+++++. ..+.+..  ++.++|++..++
T Consensus        81 idilinnAG~~~~~~~~~~~~~~~~~~~~v  110 (244)
T d1nffa_          81 LHVLVNNAGILNIGTIEDYALTEWQRILDV  110 (244)
T ss_dssp             CCEEEECCCCCCCBCTTTSCHHHHHHHHHH
T ss_pred             CeEEEECCcccCCCchhhCCHHHHhHHhhc
Confidence            33444544 3333333  467788766654

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=83.36  E-value=3.2  Score=32.32  Aligned_cols=98  Identities=12%  Similarity=0.083  Sum_probs=57.1

Q ss_pred             CCCcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------
Q 019298           99 TPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------  172 (343)
Q Consensus        99 ~~~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------  172 (343)
                      +-..+++|.|++..=..+.+.|.+.|..|++..-.-..........+.++..+..+-.     +.+.+++.++.      
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls-----~~~~i~~~~~~i~~~~g   78 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVS-----DPKAVEAVFAEALEEFG   78 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTT-----SHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCC-----CHHHHHHHHHHHHHHhC
Confidence            3345566666665556667778899999988765555566667777877777766432     45555554432      


Q ss_pred             CceEEEEeCCCCCccc--ccCHHHHHHHHHH
Q 019298          173 NTVALVIINPGNPCGN--VYSYQHLQKLAET  201 (343)
Q Consensus       173 ~~~~i~~~~p~nptG~--~~~~~~l~~l~~~  201 (343)
                      +...++-+...++.+.  .++.++|++..++
T Consensus        79 ~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~  109 (241)
T d2a4ka1          79 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRV  109 (241)
T ss_dssp             CCCEEEEGGGGTTTTC----CHHHHHHHHHH
T ss_pred             CccEeccccccccccchhhhhcccccccccc
Confidence            3444444333333333  3566777555443

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=80.69  E-value=5.6  Score=31.17  Aligned_cols=95  Identities=17%  Similarity=0.042  Sum_probs=54.4

Q ss_pred             CcEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC------Cc
Q 019298          101 NDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NT  174 (343)
Q Consensus       101 ~~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~  174 (343)
                      ..+++|.|++..=..+.+.|.+.|.+|++..-.-.......+..+.++..+..+-.     |.+++++.++.      +.
T Consensus         6 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~g~i   80 (254)
T d1hdca_           6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVT-----IEEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTT-----CHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccC-----CHHHHHHHHHHHHHHcCCc
Confidence            34455555544445556667788988887765555556666667777777665432     45555554432      33


Q ss_pred             eEEEEeCCC-CCcc--cccCHHHHHHHHHH
Q 019298          175 VALVIINPG-NPCG--NVYSYQHLQKLAET  201 (343)
Q Consensus       175 ~~i~~~~p~-nptG--~~~~~~~l~~l~~~  201 (343)
                      . +++++.. .+.+  ..++.++|++..++
T Consensus        81 D-ilVnnAg~~~~~~~~~~~~~~~~~~~~v  109 (254)
T d1hdca_          81 D-GLVNNAGISTGMFLETESVERFRKVVEI  109 (254)
T ss_dssp             C-EEEECCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred             c-EEEecCccccccccccccccccchhhhH
Confidence            4 4445542 2222  23577788776654

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=80.42  E-value=6  Score=30.69  Aligned_cols=93  Identities=11%  Similarity=0.028  Sum_probs=51.2

Q ss_pred             cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-----CceE
Q 019298          102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-----NTVA  176 (343)
Q Consensus       102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-----~~~~  176 (343)
                      .+++|.|++..=..+.+.|.+.|..|++..-.-.......+..+......++       -|.+++++.++.     ..--
T Consensus         7 ~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv-------~~~~~v~~~~~~~~~~~g~iD   79 (242)
T d1ulsa_           7 AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDV-------ADPASVERGFAEALAHLGRLD   79 (242)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCT-------TCHHHHHHHHHHHHHHHSSCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEec-------CCHHHHHHHHHHHHHhcCCce
Confidence            4455555555445556677888988888765555555555555655544433       245555554432     2223


Q ss_pred             EEEeCC-CCCccc--ccCHHHHHHHHHH
Q 019298          177 LVIINP-GNPCGN--VYSYQHLQKLAET  201 (343)
Q Consensus       177 i~~~~p-~nptG~--~~~~~~l~~l~~~  201 (343)
                      ++++|. ..+.+.  .++.++|++..++
T Consensus        80 ilVnnAG~~~~~~~~~~~~~~~~~~~~v  107 (242)
T d1ulsa_          80 GVVHYAGITRDNFHWKMPLEDWELVLRV  107 (242)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred             EEEECCcccccCchhhCcchhhhccccc
Confidence            445554 222222  3677888777664

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=80.33  E-value=4.1  Score=31.98  Aligned_cols=95  Identities=12%  Similarity=0.071  Sum_probs=54.6

Q ss_pred             cEEEecChHHHHHHHHHHhcCCCCeEEEeCCCCcchHHHHHhcCceeEEeecCCCCCCCCCHHHHHhhhcC-----CceE
Q 019298          102 DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ-----NTVA  176 (343)
Q Consensus       102 ~i~~~~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-----~~~~  176 (343)
                      .+++|.|++..=..+.+.|.+.|..|++..-.-......+...|.++..+..+-.     |.+++++.++.     ...-
T Consensus         7 ~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt-----~~~~v~~~~~~~~~~~g~iD   81 (256)
T d1k2wa_           7 TALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVT-----DQASIDRCVAELLDRWGSID   81 (256)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTT-----CHHHHHHHHHHHHHHHSCCC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCC-----CHHHHHHHHHHHHHHhCCcc
Confidence            4455555554445556667788988877665545556666777777777766432     45665554432     2333


Q ss_pred             EEEeCC-CCCccc--ccCHHHHHHHHHH
Q 019298          177 LVIINP-GNPCGN--VYSYQHLQKLAET  201 (343)
Q Consensus       177 i~~~~p-~nptG~--~~~~~~l~~l~~~  201 (343)
                      ++++|. ..+.+.  .++.++|++..++
T Consensus        82 ilVnnAg~~~~~~~~~~~~~~~~~~~~v  109 (256)
T d1k2wa_          82 ILVNNAALFDLAPIVEITRESYDRLFAI  109 (256)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred             EEEeecccccccccccCCHHHHHhhhce
Confidence            455555 222222  3577888776654