Citrus Sinensis ID: 019338

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340--
Protein Sequence
MGAGDNDDMGFQPRNESAMNCSSGMMPQKLPGMQMNSVPMYKSVSGPDHFYGSGWEPIVSLNQGESFGVSSMVSHNEFAPSYPVALENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFNLQFTCLVLY
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccEcccccccccccccccccccccccccccHccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHcccEEEc
Coil and Loop (DISEMBL)
mgagdnddmgfqprnesamncssgmmpqklpgmqmnsvpmyksvsgpdhfygsgwepivslnqgesfgvssmvshnefapsypvalenqgmsstsnldqyssdpsfvelvpkipgfgsgnfSEMVssfglpenaqiassgcppnyvpnkegcyernsrnvsqsyeDHQICEEAAIgvatngktrkrapesnsllntdknvevelqkdpsgdssgilkeqdEKKQKIEQNtganmrgkqaakptkdsslsgeapkEYIHMRAkrgqatnshsLAERVRREKISERMRLLQELVpgcnkitgkaVMLDEIINYVQSLQQQVEVCYFMAVKWRHFNLQFTCLVLY
Flexible Loop (DISEMBL)
mgagdnddmgfqprneSAMNCSSGMMPQKLPGMQMNSVPMYKSVSGPDHFYGSGWEPIVSLNQGESFGVSSMVSHNEFAPSYPVALENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQICEEAaigvatngktrkrapesnsllntdknvevelqkdpsgdssgilkeqdekkqkieqntganmrgkqaakptkdsslsgeAPKEYIHMRakrgqatnshslaeRVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFNLQFTCLVLY
Low Complexity Region (SEG)
MGAGDNDDMGFQPRNESAMNCSSGMMPQKLPGMQMNSVPMYKSVSGPDHFYGSGWEPIVSLNQGESFGVSSMVSHNEFAPSYPVALENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILkeqdekkqkieqNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFNLQFTCLVLY
Disordered region (IsUnstruct)
************************************************HFYGSGWEPIVSLNQ*********************************************LVPKIPGF****************************************************IC****I*************************************************************************************************************MRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFNLQFTCLVL*
Disordered Region (DISOPRED)
**************************************************************************************************************************************************************************************************************************************************************************************EKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFNLQFTCLVLY
Disordered Region (DISEMBL)
********MGFQPRNESAMNCSSGMMPQKLPGMQMNSVPMYKSVSGPDHFYGSGWEPIVSLNQGESFGVSSMVSHNEFAPSYPVALENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTG*******************EAPKEYIHMR**************RVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFNLQFTCLVLY
Disordered Region (DISPRO)
******************************************SVSGPDHFYGSGWEPIVSLNQGESFGVSSMVSHNEFAPSYPVALENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQIASSG****************************************************************************************************************PKEYIHMRAKRGQ****HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFNLQFTCLVLY
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGAGDNDDMGFQPRNESAMNCSSGMMPQKLPGMQMNSVPMYKSVSGPDHFYGSGWEPIVSLNQGESFGVSSMVSHNEFAPSYPVALENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFNLQFTCLVLY
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	342	2.2.26 [Sep-21-2011]
Q6NKN9	366	Transcription factor bHLH	yes	no	0.710	0.663	0.444	1e-42
Q9C670	390	Transcription factor bHLH	no	no	0.625	0.548	0.398	2e-34
Q9CAA9	486	Transcription factor bHLH	no	no	0.640	0.450	0.391	7e-34
Q9SRT2	456	Transcription factor bHLH	no	no	0.368	0.276	0.517	6e-32
Q9LK48	371	Transcription factor bHLH	no	no	0.254	0.234	0.733	1e-31
Q9FJL4	498	Transcription factor bHLH	no	no	0.233	0.160	0.746	8e-31
Q93W88	286	Transcription factor bHLH	no	no	0.301	0.360	0.592	1e-29
Q0JXE7	343	Transcription factor BPE	no	no	0.330	0.329	0.543	4e-29
Q93VJ4	304	Transcription factor BEE	no	no	0.353	0.398	0.539	7e-29
Q9ZPW3	337	Transcription factor bHLH	no	no	0.608	0.617	0.396	1e-28

>sp|Q6NKN9|BH074_ARATH Transcription factor bHLH74 OS=Arabidopsis thaliana GN=BHLH74 PE=2 SV=1

 Score =  174 bits (441), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 136/306 (44%), Positives = 179/306 (58%), Gaps = 63/306 (20%)

Query: 35  MNSVPMYKSVSGPDHFYGSG-WEPIVSLNQGESFGVSSMVSHNEFAPSYPVALENQGMSS 93
           + S+P+Y      D F+ S  W+P+V+         ++  S + + PS  +A++N GMS 
Sbjct: 28  ITSMPLYAKA---DPFFSSADWDPVVN-------AAAAGFSSSHYHPS--MAMDNPGMSC 75

Query: 94  TSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSS---FGLPENAQIASSGCPPNYV-PNK 149
            S+                 PG  SG  ++M +S   FG     QI       +++  +K
Sbjct: 76  FSHYQ---------------PGSVSGFAADMPASLLPFGDCGGGQIG------HFLGSDK 114

Query: 150 EGCYERNSRNVSQSYEDH-QICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDP 208
           +G  ER  R    S+EDH Q+ ++A +G +  GK  +R PE+ S  N  K VE E Q+DP
Sbjct: 115 KG--ERLIRAGESSHEDHHQVSDDAVLGASPVGK--RRLPEAESQWNK-KAVE-EFQEDP 168

Query: 209 SGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQAT 267
              +     +Q +KK K +Q+       K+     K+SS S EAPKE YIHMRA+RGQAT
Sbjct: 169 QRGN-----DQSQKKHKNDQS-------KETV--NKESSQSEEAPKENYIHMRARRGQAT 214

Query: 268 NSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAV 327
           NSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE   F+++
Sbjct: 215 NSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE---FLSM 271

Query: 328 KWRHFN 333
           K    N
Sbjct: 272 KLATVN 277

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C670|BH076_ARATH Transcription factor bHLH76 OS=Arabidopsis thaliana GN=BHLH76 PE=2 SV=1

 Score =  147 bits (370), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/246 (39%), Positives = 131/246 (53%), Gaps = 32/246 (13%)

Query: 96  NLDQYSSDPSFVELVPKIPGFGSGNF--SEMVSSFGLPENAQI------ASSGCPPNYVP 147
           N+ Q+ +D  F+E   K   FG G    ++  SS G+P++  +        SG   +  P
Sbjct: 73  NMAQFPADSGFIERAAKFSFFGCGEMMMNQQQSSLGVPDSTGLFLQDTQIPSGSKLDNGP 132

Query: 148 NKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKD 207
             +       R+++   ED Q         A  G+T  +   S       K+ E      
Sbjct: 133 LTDASKLVKERSINNVSEDSQSSGGNGHDDAKCGQTSSKGFSSKKRKRIGKDCE------ 186

Query: 208 PSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQAT 267
                     E+++KKQK EQ+  +N     + K   DS   G     YIHMRA+RGQAT
Sbjct: 187 ----------EEEDKKQKDEQSPTSNANKTNSEKQPSDSLKDG-----YIHMRARRGQAT 231

Query: 268 NSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAV 327
           NSHSLAERVRREKISERM+ LQ+LVPGC+K+TGKAVMLDEIINYVQSLQ Q+E   F+++
Sbjct: 232 NSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIE---FLSM 288

Query: 328 KWRHFN 333
           K    N
Sbjct: 289 KLSAVN 294

Arabidopsis thaliana (taxid: 3702)

>sp|Q9CAA9|BH049_ARATH Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=2 SV=1

 Score =  144 bits (364), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 108/276 (39%), Positives = 145/276 (52%), Gaps = 57/276 (20%)

Query: 97  LDQYSSDPSFVELVPKIPGFGSGNFSEMVS-------SFGL------PENAQIASS---- 139
           + Q+ +D  F+E   +   F  GNFS+MV+       + GL          Q  S+    
Sbjct: 123 MAQFPADSGFIERAARFSLFSGGNFSDMVNQPLGNSEAIGLFLQGGGTMQGQCQSNELNV 182

Query: 140 GCPPNYV----------------PNKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKT 183
           G P N V                PN  G     S NVS+  +      +     ++N K 
Sbjct: 183 GEPHNDVSVAVKESTVRSSEQAKPNVPG-----SGNVSEDTQSSGGNGQKGRETSSNTKK 237

Query: 184 RKRAPESNS-LLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKI--EQNTGANMRGKQAA 240
           RKR  + NS    + ++ + E + D +GD     K  DE+      +++     +GKQ++
Sbjct: 238 RKRNGQKNSEAAQSHRSQQSEEEPDNNGDE----KRNDEQSPNSPGKKSNSGKQQGKQSS 293

Query: 241 KPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITG 300
            P KD          YIH+RA+RGQATNSHSLAERVRREKISERM+ LQ+LVPGCNK+TG
Sbjct: 294 DPPKDG---------YIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTG 344

Query: 301 KAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFNLQF 336
           KAVMLDEIINYVQSLQ+QVE   F+++K    N Q 
Sbjct: 345 KAVMLDEIINYVQSLQRQVE---FLSMKLATVNPQM 377

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SRT2|BH062_ARATH Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2 SV=1

 Score =  138 bits (348), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 73/141 (51%), Positives = 99/141 (70%), Gaps = 15/141 (10%)

Query: 208 PSGDSSGILKEQDEKKQK------------IEQNTGANMRGKQAAKPTKDSSLSGEAPKE 255
           P+G+SSG L  + + K K            IE+   ++ +  + ++   D + S +  K+
Sbjct: 195 PAGESSGELSRKRKTKSKQNSPSAVSSSKEIEEKEDSDPKRCKKSEENGDKTKSIDPYKD 254

Query: 256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSL 315
           YIH+RA+RGQAT+SHSLAERVRREKISERM+LLQ+LVPGCNK+TGKA+MLDEIINYVQSL
Sbjct: 255 YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSL 314

Query: 316 QQQVEVCYFMAVKWRHFNLQF 336
           Q+QVE   F+++K    N + 
Sbjct: 315 QRQVE---FLSMKLSSVNTRL 332

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LK48|BH077_ARATH Transcription factor bHLH77 OS=Arabidopsis thaliana GN=BHLH77 PE=2 SV=1

 Score =  137 bits (346), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 66/90 (73%), Positives = 77/90 (85%), Gaps = 3/90 (3%)

Query: 244 KDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAV 303
           KD +   EAPK+YIH+RA+RGQAT+SHSLAER RREKISERM LLQ+LVPGCN+ITGKAV
Sbjct: 176 KDDAKPPEAPKDYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAV 235

Query: 304 MLDEIINYVQSLQQQVEVCYFMAVKWRHFN 333
           MLDEIINYVQSLQ+QVE   F+++K    N
Sbjct: 236 MLDEIINYVQSLQRQVE---FLSMKLATVN 262

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FJL4|BH078_ARATH Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2 SV=1

 Score =  134 bits (338), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 62/83 (74%), Positives = 74/83 (89%), Gaps = 3/83 (3%)

Query: 251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
           E PK+YIH+RA+RGQAT+SHSLAERVRREKI ERM+LLQ+LVPGCNK+TGKA+MLDEIIN
Sbjct: 293 EPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIIN 352

Query: 311 YVQSLQQQVEVCYFMAVKWRHFN 333
           YVQSLQ+QVE   F+++K    N
Sbjct: 353 YVQSLQRQVE---FLSMKLSSVN 372

Arabidopsis thaliana (taxid: 3702)

>sp|Q93W88|BH137_ARATH Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137 PE=2 SV=1

 Score =  130 bits (327), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 64/108 (59%), Positives = 83/108 (76%), Gaps = 5/108 (4%)

Query: 222 KKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKI 281
           +K +   N+   + G+++ K  + S    E P +YIH+RA+RGQAT+SHSLAERVRREKI
Sbjct: 101 RKARNSNNSKEGVEGRKSKKQKRGSK--EEPPTDYIHVRARRGQATDSHSLAERVRREKI 158

Query: 282 SERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVKW 329
           SERMR LQ LVPGC+K+TGKA+MLDEIINYVQ+LQ QVE   F+++K 
Sbjct: 159 SERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVE---FLSMKL 203

Arabidopsis thaliana (taxid: 3702)

>sp|Q0JXE7|BPE_ARATH Transcription factor BPE OS=Arabidopsis thaliana GN=BPE PE=2 SV=1

 Score =  129 bits (323), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 63/116 (54%), Positives = 84/116 (72%), Gaps = 3/116 (2%)

Query: 218 EQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAERVR 277
           E + K+QKI++        +     T+      E  K+YIH+RA+RGQAT+SHSLAER R
Sbjct: 95  EGENKRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHSLAERAR 154

Query: 278 REKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFN 333
           REKISERM++LQ+LVPGCNK+ GKA++LDEIINY+QSLQ+QVE   F+++K    N
Sbjct: 155 REKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVE---FLSMKLEAVN 207

Involved in the control of petal size, by interfering with postmitotic cell expansion to limit final petal cell size.

Arabidopsis thaliana (taxid: 3702)

>sp|Q93VJ4|BEE2_ARATH Transcription factor BEE 2 OS=Arabidopsis thaliana GN=BEE2 PE=2 SV=1

 Score =  128 bits (321), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 69/128 (53%), Positives = 93/128 (72%), Gaps = 7/128 (5%)

Query: 214 GILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPK-EYIHMRAKRGQATNSHSL 272
           G  +++++KK K E  T  +M+GK     T+ SS   E  K +YIH+RA+RG+AT+ HSL
Sbjct: 98  GKTEKREKKKIKAEDETEPSMKGKSNMSNTETSS---EIQKPDYIHVRARRGEATDRHSL 154

Query: 273 AERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHF 332
           AER RREKIS++M+ LQ++VPGCNK+TGKA MLDEIINYVQSLQQQVE   F+++K    
Sbjct: 155 AERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVE---FLSMKLSVI 211

Query: 333 NLQFTCLV 340
           N +  C +
Sbjct: 212 NPELECHI 219

Positive regulator of brassinosteroid signaling.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZPW3|BH064_ARATH Transcription factor bHLH64 OS=Arabidopsis thaliana GN=BHLH64 PE=2 SV=3

 Score =  127 bits (320), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/242 (39%), Positives = 131/242 (54%), Gaps = 34/242 (14%)

Query: 108 ELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDH 167
           EL+  +   GS N   + SSF      Q+  SG  PNY       +E  SR  S   E  
Sbjct: 47  ELLQILQFHGSNNDELLESSFS---QFQMLGSGFGPNYNMGFGPPHESISRTSSCHMEPV 103

Query: 168 QICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIE 227
              E   + + T  +TR  A      L   +  EV+ +++          ++ EKK K+E
Sbjct: 104 DTME---VLLKTGEETRAVA------LKNKRKPEVKTREE----------QKTEKKIKVE 144

Query: 228 QNTGANMRGKQAAKPTKDSS-LSGEAPK--------EYIHMRAKRGQATNSHSLAERVRR 278
             T ++M+GK     T+ SS  S E  K        +YIH+RA+RGQAT+ HSLAER RR
Sbjct: 145 AETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDRHSLAERARR 204

Query: 279 EKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFNLQFTC 338
           EKIS++M+ LQ++VPGCNK+TGKA MLDEIINYVQ LQ+QVE   F+++K    N +   
Sbjct: 205 EKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVE---FLSMKLAVLNPELEL 261

Query: 339 LV 340
            V
Sbjct: 262 AV 263

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	342
225458914	430	PREDICTED: transcription factor bHLH74 [	0.961	0.765	0.617	1e-103
255537964	408	DNA binding protein, putative [Ricinus c	0.912	0.764	0.585	4e-97
224081861	407	predicted protein [Populus trichocarpa]	0.894	0.751	0.594	3e-95
147818198	484	hypothetical protein VITISV_034133 [Viti	0.897	0.634	0.555	2e-85
224067162	330	predicted protein [Populus trichocarpa]	0.701	0.727	0.648	9e-80
356552284	429	PREDICTED: transcription factor bHLH74-l	0.941	0.750	0.529	4e-75
125664136	400	basic helix-loop-helix protein [Sesamum	0.859	0.735	0.522	1e-74
356577684	435	PREDICTED: transcription factor bHLH74-l	0.950	0.747	0.525	2e-74
449509268	402	PREDICTED: transcription factor bHLH74-l	0.862	0.733	0.513	3e-70
359494803	415	PREDICTED: transcription factor bHLH74-l	0.912	0.751	0.448	2e-61

>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera] gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 210/340 (61%), Positives = 254/340 (74%), Gaps = 11/340 (3%)

Query: 1   MGAGDNDDMGFQPRNESAMNC-SSGM----MPQKLPGMQMNSVPMYKSVSGPDHFYGSGW 55
           MG  DN +MGF   ++S +NC SSGM    + +K+ GM M+S  MYKS +G D F+GSGW
Sbjct: 1   MGIDDNGNMGFPNTSQSILNCPSSGMNTHPISEKVTGMTMSSASMYKSSNGGDPFFGSGW 60

Query: 56  EPIVSLNQGESFGVSSMVSHNEFAPS-YPVALENQGMSSTSNLDQYSSDPSFVELVPKIP 114
           +PIVSL+Q E+FG SSMVSH+EFA S YPV LENQG+ ST +L  Y S+ S VE+VPK+P
Sbjct: 61  DPIVSLSQNENFGGSSMVSHSEFANSAYPVVLENQGIGSTPHLVLYPSNSSLVEMVPKLP 120

Query: 115 GFGSGNFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQICEEAA 174
            FGSG+FSEMV+SFGLPE  Q A+SGCPPN+ PNKEG  E+ S N +QS E HQI E  A
Sbjct: 121 CFGSGSFSEMVASFGLPECGQTANSGCPPNFPPNKEGLTEK-SLNGAQSQEGHQISEGDA 179

Query: 175 IGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANM 234
           +  + +GK RK + +    LNT K+ + E  K    ++S   KEQ+EKK KI+QN   N+
Sbjct: 180 VDASPSGKRRKSSFDPRPPLNTSKSADGEQPKGLPWENSEFSKEQEEKKLKIDQNMSPNL 239

Query: 235 RGKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVP 293
           RGKQ  K  KD+S +GEAPKE YIH+RA+RGQATNSHSLAERVRREKISERMRLLQELVP
Sbjct: 240 RGKQPNKHAKDNSSNGEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVP 299

Query: 294 GCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFN 333
           GCNKITGKAVMLDEIINYVQSLQQQVE   F+++K    N
Sbjct: 300 GCNKITGKAVMLDEIINYVQSLQQQVE---FLSMKLATVN 336

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis] gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]

 Score =  360 bits (925), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 198/338 (58%), Positives = 239/338 (70%), Gaps = 26/338 (7%)

Query: 5   DNDDMGFQPRNESAMNCSSGMMPQKLPGMQMNSVPMYKSVSGPDHFYGSGWEPIVSLNQG 64
           +N+ M FQ   ES MNC S        GM  N             F+   W+P+VSLNQ 
Sbjct: 7   NNEGMAFQSGGESVMNCQSS-------GMSANP------------FFPPAWDPVVSLNQH 47

Query: 65  ESFGVSSMVSHNEFAPS-YPVALENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSE 123
           E+FG +SMVS +EF  S Y + +ENQG++S+S+L  Y SD S+VELVPK P +GSG+FSE
Sbjct: 48  ENFG-ASMVSQSEFTNSHYAIVMENQGINSSSHLVHYQSDSSYVELVPKFPSYGSGSFSE 106

Query: 124 MVSSFGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKT 183
           MVSSFGL +  QI++SGC PNY  N     ER   N + S EDHQ+ EE  +GV+ +GK 
Sbjct: 107 MVSSFGLTDCGQISNSGCHPNYTSNSAANNERTITNSALSQEDHQLSEEPVVGVSPDGKR 166

Query: 184 RKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPT 243
           RKR  E +S  + +KN E E+ KDPSG+SS I KEQDEKK + EQNT AN+RGKQAAK  
Sbjct: 167 RKRLAEPSSPFDPNKNAE-EMHKDPSGNSSDIPKEQDEKKSRTEQNTAANLRGKQAAKQA 225

Query: 244 KDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKA 302
           K++S SGEAPKE YIH+RA+RGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKA
Sbjct: 226 KENSHSGEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKA 285

Query: 303 VMLDEIINYVQSLQQQVEVCYFMAVKWRHFNLQFTCLV 340
           VMLDEIINYVQSLQQQVE   F+++K    N +    +
Sbjct: 286 VMLDEIINYVQSLQQQVE---FLSMKLATVNPELNIDI 320

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa] gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]

 Score =  354 bits (908), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 199/335 (59%), Positives = 234/335 (69%), Gaps = 29/335 (8%)

Query: 2   GAGDND-DMGFQPRNESAMNCSSGMMPQKLPGMQMNSVPMYKSVSGPDHFYGSGWEPIVS 60
           G+GDN+ D+G+Q R ES M C         P   MN+ P          FY S W+P+VS
Sbjct: 3   GSGDNNGDLGYQNRVESVMKC---------PSSGMNTNP----------FYVSAWDPVVS 43

Query: 61  LNQGESFGVSSMVSHNEFAPS-YPVALENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSG 119
           L+Q  +FG SS  S +EF+ S +P+ +EN G+S+T +L  Y SD  FVELVPK PGFGSG
Sbjct: 44  LSQLGNFGGSSTGSQSEFSNSPFPIVMENPGISNTCHLVHYPSDSGFVELVPKFPGFGSG 103

Query: 120 NFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQICEEAAIGVAT 179
           NFSEMV S GL E  QI ++GCPPNY   KE   E  +   +Q  ED Q+ EE  IG   
Sbjct: 104 NFSEMVGSVGLTECGQIVNAGCPPNY---KEANNESTAHG-AQREEDQQLSEETTIGALP 159

Query: 180 NGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQA 239
           NGK R+   ESNS  + +KN E E QKDPSG+SS I KE DEKKQKIEQN  AN+RGKQ 
Sbjct: 160 NGKRRRLVAESNSPFDPNKNAEGEFQKDPSGESSDIAKELDEKKQKIEQNCSANLRGKQV 219

Query: 240 AKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKI 298
           AK  KD+  SGEAPK+ YIH+RA+RGQATNSHSLAERVRREKISERMR+LQELVPGCNKI
Sbjct: 220 AKQAKDNPQSGEAPKDDYIHVRARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKI 279

Query: 299 TGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFN 333
           TGKAVMLDEIINYVQSLQQQVE   F+++K    N
Sbjct: 280 TGKAVMLDEIINYVQSLQQQVE---FLSMKLATVN 311

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147818198|emb|CAN60403.1| hypothetical protein VITISV_034133 [Vitis vinifera]

 Score =  322 bits (825), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 189/340 (55%), Positives = 233/340 (68%), Gaps = 33/340 (9%)

Query: 1   MGAGDNDDMGFQPRNESAMNC-SSGM----MPQKLPGMQMNSVPMYKSVSGPDHFYGSGW 55
           MG  DN +MGF   ++S +NC SSGM    + +K+ GM M+S  MYKS +G D F+GSGW
Sbjct: 1   MGIDDNGNMGFPNTSQSILNCPSSGMNTHPISEKVTGMTMSSASMYKSSNGGDPFFGSGW 60

Query: 56  EPIVSLNQGESFGVSSMVSHNEFAPS-YPVALENQGMSSTSNLDQYSSDPSFVELVPKIP 114
           +PIVSL+Q E+FG SSMVSH+EFA S YPV LENQG+ ST +L  Y S+ S VE+VPK+P
Sbjct: 61  DPIVSLSQNENFGGSSMVSHSEFANSAYPVVLENQGIGSTPHLVLYPSNSSLVEMVPKLP 120

Query: 115 GFGSGNFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQICEEAA 174
            FGSG+FSEMV+SFGLPE  Q A+SGCPPN+ PNKEG  E+ S N +QS E HQI E  A
Sbjct: 121 CFGSGSFSEMVASFGLPECGQTANSGCPPNFPPNKEGLTEK-SLNGAQSQEGHQISEGDA 179

Query: 175 IGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANM 234
           +  + +GK RK + +    LNT K+ + E  K    ++S   KEQ+EKKQKI+QN   N+
Sbjct: 180 VDASPSGKRRKSSFDPRPPLNTSKSADGEQPKGLPWENSEFSKEQEEKKQKIDQNMSPNL 239

Query: 235 RGKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVP 293
           RGKQ  K  KD+S +GEAPKE YIH+RA+RGQATNSHSLAER                  
Sbjct: 240 RGKQPNKHAKDNSSNGEAPKENYIHVRARRGQATNSHSLAER------------------ 281

Query: 294 GCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFN 333
               ITGKAVMLDEIINYVQSLQQQVE   F+++K    N
Sbjct: 282 ----ITGKAVMLDEIINYVQSLQQQVE---FLSMKLATVN 314

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa] gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]

 Score =  303 bits (775), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 166/256 (64%), Positives = 186/256 (72%), Gaps = 16/256 (6%)

Query: 86  LENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPPNY 145
           +EN G+S   NL  Y S   FVELVPK PGFGSGNFSEMV S GL E  QI  +GCPPNY
Sbjct: 1   MENPGIS---NLVHYPSGSGFVELVPKFPGFGSGNFSEMVGSLGLTECGQITHTGCPPNY 57

Query: 146 VPNKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQ 205
             NKE        N +Q  ED Q+ EE +IG + NGK RKR PESNS L+ +KN E EL+
Sbjct: 58  --NKEA-------NNAQHQEDQQLSEETSIGASPNGKRRKRVPESNSPLDPNKNTEGELR 108

Query: 206 KDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQAAKPTKDSSLSGEAPKE-YIHMRAKRG 264
           KD SG+S  I KE DEK QK EQN G N+RGKQAAK  KD + SGE PKE Y H+RA+RG
Sbjct: 109 KDLSGESCDIAKELDEKTQKTEQNPGPNLRGKQAAKQAKDDTQSGEVPKENYFHVRARRG 168

Query: 265 QATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYF 324
           QATNSHSLAERVRREKISERMR+LQELVPGCNKITGKAVMLDEIINYVQSLQQQVE   F
Sbjct: 169 QATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE---F 225

Query: 325 MAVKWRHFNLQFTCLV 340
           +++K    N +    V
Sbjct: 226 LSMKLATVNPELQIDV 241

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]

 Score =  287 bits (735), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 181/342 (52%), Positives = 227/342 (66%), Gaps = 20/342 (5%)

Query: 3   AGDNDDMGFQPRNESAMNC-SSGMMPQKL--PGMQMNSVPMYKSVSGPDHFYGS-GWEPI 58
            G  + MGFQ  NES + C +SG+    +    M ++SV + K     + F  S  W+P+
Sbjct: 2   GGQENAMGFQHGNESILTCPTSGLSGANVNVSEMAISSVSIAKPSDVVNPFIASSAWDPL 61

Query: 59  VSLNQGESFGVSSMVSHNEFA---PSYPVALENQGMSSTSNLDQYSSDPSFVELVPKIPG 115
           VSL+Q +SFG SSMVSH+EFA    SYP+ L+NQG+S+TS+L QY SD +   +VPK+  
Sbjct: 62  VSLSQVQSFGGSSMVSHSEFANSNSSYPLVLDNQGISNTSHLVQYMSDSNLGGMVPKVHS 121

Query: 116 FGSGNFSEMVS--SFGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQICEEA 173
           + SG FSEMV   SF    +A +A++G P +Y P KE        N  QS  +  I EE 
Sbjct: 122 YASGGFSEMVGAGSFCQHRSADMANTGYPIHYNPIKEAPI-----NGEQSQVEDSIPEEE 176

Query: 174 AIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGAN 233
           A G A +G  RKR  + NS  + +KN E +   D  G +S   KE  EK+ K EQN GA+
Sbjct: 177 APGSAPSGNRRKRGLDHNSTFSPNKNAEGDAVNDSPGKASNGPKEH-EKRPKGEQNNGAD 235

Query: 234 MRGKQAAKPTKDS-SLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQEL 291
           +RGKQ+ K  KD+ S SGEAPKE +IH+RA+RGQATNSHSLAERVRREKISERMRLLQEL
Sbjct: 236 VRGKQSVKQAKDNNSQSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQEL 295

Query: 292 VPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFN 333
           VPGCNKITGKAVMLDEIINYVQSLQQQVE   F+++K    N
Sbjct: 296 VPGCNKITGKAVMLDEIINYVQSLQQQVE---FLSMKLATVN 334

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]

 Score =  286 bits (731), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 175/335 (52%), Positives = 213/335 (63%), Gaps = 41/335 (12%)

Query: 8   DMGFQPRNESA-MNCSSGMMP-----QKLPGMQMNSVPMYKSVSGPDHFYGS-GWEPIVS 60
           D  FQ RN S+ +NC S +M        + GM + S  M+K  +G D FY S GW+P++S
Sbjct: 3   DRVFQHRNSSSILNCPSSVMATTSISDNVAGMSICSESMFKPPNGIDPFYSSSGWDPVIS 62

Query: 61  LNQGESFGVSSMVSHNEFA-PSYPVALENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSG 119
            +Q  +FG SSMV  NEFA P+YPV LENQ M S+S+L  + SD   V +VPKIP FGSG
Sbjct: 63  QDQSGNFGNSSMVLQNEFANPNYPVLLENQTMGSSSHLVHFPSDSGLVGMVPKIPSFGSG 122

Query: 120 NFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQICEEAAIGVAT 179
           +FSE+VSSFG              N+  N     +   +NV  + +  Q  E   +G + 
Sbjct: 123 SFSEIVSSFG------------HSNFAQNNGAGVQNTVKNVEDAQDHRQDSENGVLGASP 170

Query: 180 NGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMRGKQA 239
           NGK RKR           KNVEVE QKD + D + + KE DEKK     N+G + R +QA
Sbjct: 171 NGK-RKR-----------KNVEVEKQKDQTRDLAELPKEYDEKK-----NSGPSSRSRQA 213

Query: 240 AKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKI 298
            K  KD+S   EA KE YIH+RAKRGQATNSHSLAERVRRE+ISERMRLLQELVPGCNKI
Sbjct: 214 VKEAKDNSSGAEASKENYIHVRAKRGQATNSHSLAERVRRERISERMRLLQELVPGCNKI 273

Query: 299 TGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFN 333
           TGKAVMLDEIINYVQSLQQQVE   F+++K    N
Sbjct: 274 TGKAVMLDEIINYVQSLQQQVE---FLSMKLATVN 305

Source: Sesamum indicum

Species: Sesamum indicum

Genus: Sesamum

Family: Pedaliaceae

Order: Lamiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]

 Score =  285 bits (729), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 183/348 (52%), Positives = 228/348 (65%), Gaps = 23/348 (6%)

Query: 1   MGAGDNDDMGFQPRNESAMNC--SSGMM-PQ-KLPGMQMNSVPMYK--SVSGPDHFYGSG 54
           MG  +N   GFQ  NES + C  +SG+  P   +  M ++SV M K  +V        S 
Sbjct: 1   MGGQENAMGGFQHGNESILTCPPTSGLSGPNVNVSEMAISSVSMAKPSNVVANPFLASST 60

Query: 55  WEPIVSLNQGESFGVSSMVSHNEFA---PSYPVALENQG-MSSTSNLDQYSSDPSFVELV 110
           W+P+VSL+Q ++FG SSMVSHNEF     SYP+ L+NQG +S+TS+L QY SD +   +V
Sbjct: 61  WDPLVSLSQAQTFGGSSMVSHNEFVNANSSYPLVLDNQGGISNTSHLVQYMSDSNLGGIV 120

Query: 111 PKIPGFGSGNFSEMVSS--FGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQ 168
           PK+  + SG FSEMV S  F    +  +A +G P +Y P KE        N  QS  +  
Sbjct: 121 PKVHSYASGGFSEMVGSGSFCQHGSGDMADTGYPTHYNPIKEAPI----INGEQSQVEDS 176

Query: 169 ICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQ 228
           I EE A G A +G  RKR  + NS  + +KN E +  KD  G +S   KE  EK+ K+EQ
Sbjct: 177 IPEEEAPGSAPSGNRRKRGLDHNSTFSPNKNAEGDAVKDSPGKASDGSKEH-EKRPKVEQ 235

Query: 229 NTGANMRGKQAAKPTKDS--SLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERM 285
           N GA++RGKQ+ K  KD+  S SGEAPKE +IH+RA+RGQATNSHSLAERVRREKISERM
Sbjct: 236 NNGADVRGKQSVKQAKDNNNSQSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERM 295

Query: 286 RLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFN 333
           RLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE   F+++K    N
Sbjct: 296 RLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE---FLSMKLATVN 340

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]

 Score =  271 bits (693), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 175/341 (51%), Positives = 215/341 (63%), Gaps = 46/341 (13%)

Query: 1   MGAGDNDDMGFQPRNESAMNCSSGMMPQKLPGMQMNSVPMYKSVSGPDHFYGSGWEPIVS 60
           MG  +ND+MGF+  N+  MNC S M         M S            F+GSGW+P+VS
Sbjct: 1   MGDLENDEMGFRNSNDGLMNCPSTM--------AMGS------------FFGSGWDPLVS 40

Query: 61  LNQGESFGV-SSMVS-HNEFAPSYPVALENQGMSSTSNLD-QYSSDPSFVELVPKIPGFG 117
           L Q E++G  SSMVS H EF+ S+PV LEN G S T+    QY +D   +E+  K+P FG
Sbjct: 41  LGQSENYGAASSMVSSHGEFSNSFPVVLENHGGSGTTQQGVQYPTD---LEMGSKLPCFG 97

Query: 118 SGNFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQICEEAAIGV 177
           SGNFSEM  SFG+    QI   GC  NY           +     S E+  +  E  + +
Sbjct: 98  SGNFSEMFGSFGVA--GQILG-GCSSNYR------NGGTTNTTQTSQENLPLAGEEILPL 148

Query: 178 AT---NGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANM 234
           +    NGK RKR  +S    +++K  +++L+KD SGDSS     Q+EK  ++EQN G N 
Sbjct: 149 SVGSPNGKIRKRGLDSTFPFSSNKKSDMKLKKDVSGDSS---STQEEKNAEMEQNLGGNS 205

Query: 235 RGKQAAKPTKD-SSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELV 292
           RGK   K TK+ SS S EAPKE YIH+RA+RGQATNSHSLAERVRREKISERMRLLQELV
Sbjct: 206 RGKSTGKQTKEKSSNSAEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELV 265

Query: 293 PGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFN 333
           PGCNKITGKAVMLDEIINYVQSLQQQVE   F+++K    N
Sbjct: 266 PGCNKITGKAVMLDEIINYVQSLQQQVE---FLSMKLATVN 303

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera] gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 154/343 (44%), Positives = 199/343 (58%), Gaps = 31/343 (9%)

Query: 2   GAGDNDDMGFQPRNESAMNCSSGMMPQKLPGMQMNSVPMYKSVSGPDHFYGSGWEPIVSL 61
           G+GD+   GF+ ++ S ++C S           +       S++G    +   ++P V L
Sbjct: 5   GSGDS---GFEHKDGSLLDCPS-----------LGIFTSLSSLNGVTSIFTGDYDPPVPL 50

Query: 62  -NQGESFGVSSMVSHNEFAPSYPV-ALENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSG 119
            +  +  G+  + +H++    Y   ALENQGMSST +L QYSSDP FVELVP  P F + 
Sbjct: 51  AHNADIIGLPPLKTHDQIDDLYAGNALENQGMSSTIHLTQYSSDPRFVELVPNFPHFSTA 110

Query: 120 NFSEMVSSFGLPENAQIASSGCPPNYVPNKEGCYE----RNSRNVSQSYEDHQICEEAAI 175
            FSEMV+   LP+   I   GCPP++   K G  +    +N  N     E  QI ++  +
Sbjct: 111 GFSEMVTPRCLPKCHNI---GCPPDHPLEKNGTRKTSNLQNKTNNCAQMEGCQIADDGTM 167

Query: 176 GVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSGILKEQDEKKQKIEQNTGANMR 235
            ++   K RKR  +  S     KN+E    KD        L  QDE+KQK EQ   AN  
Sbjct: 168 ELSPIEKKRKRLADDRSQFAHLKNMEAAQPKDEC------LGRQDERKQKAEQKIVANNC 221

Query: 236 GKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPG 294
           GK      K SS +GEAPKE YIH+RAKRGQATNSHSLAERVRRE+ISERM+ LQ+LVPG
Sbjct: 222 GKLIGAEVKMSSQTGEAPKEDYIHVRAKRGQATNSHSLAERVRRERISERMKFLQDLVPG 281

Query: 295 CNKITGKAVMLDEIINYVQSLQQQVEVCYF-MAVKWRHFNLQF 336
           CNKITGKAVMLDEIINYVQSLQ+QVE     +A  +   N+Q 
Sbjct: 282 CNKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVYPEMNVQI 324

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	342
TAIR|locus:2201906	366	AT1G10120 "AT1G10120" [Arabido	0.453	0.423	0.551	4e-35
TAIR|locus:2079676	456	AT3G07340 "AT3G07340" [Arabido	0.251	0.188	0.707	6.6e-35
TAIR|locus:2152551	498	AT5G48560 "AT5G48560" [Arabido	0.233	0.160	0.746	9.5e-34
UNIPROTKB|Q5N802	481	P0004D12.24 "BHLH transcriptio	0.681	0.484	0.399	1.1e-32
UNIPROTKB|Q5VR96	437	P0038C05.31-1 "Os06g0275600 pr	0.690	0.540	0.390	1.8e-32
UNIPROTKB|Q69JJ6	428	OSJNBa0026C08.22 "TA1 protein-	0.640	0.511	0.384	7.7e-32
TAIR|locus:2205420	486	AT1G68920 [Arabidopsis thalian	0.482	0.339	0.472	6.9e-31
TAIR|locus:2095198	371	AT3G23690 "AT3G23690" [Arabido	0.690	0.636	0.386	3e-30
TAIR|locus:2028804	390	CIB5 "AT1G26260" [Arabidopsis	0.611	0.535	0.390	1.3e-29
UNIPROTKB|Q84QW1	405	OJ1191_A10.109 "BHLH transcrip	0.690	0.582	0.369	2.7e-29

TAIR|locus:2201906 AT1G10120 "AT1G10120" [Arabidopsis thaliana (taxid:3702)]

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 97/176 (55%), Positives = 114/176 (64%)

Query:   154 ERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSS 213
             ER  R    S+EDH    + A+ +  +   ++R PE+ S  N  K VE E Q+DP   + 
Sbjct:   117 ERLIRAGESSHEDHHQVSDDAV-LGASPVGKRRLPEAESQWNK-KAVE-EFQEDPQRGND 173

Query:   214 GILXXXXXXXXXXXXNTGANMRGKQAAKPTKDSSLSGEAPKE-YIHMRAKRGQATNSHSL 272
                                N + K+     K+SS S EAPKE YIHMRA+RGQATNSHSL
Sbjct:   174 ------------QSQKKHKNDQSKETVN--KESSQSEEAPKENYIHMRARRGQATNSHSL 219

Query:   273 AERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVK 328
             AERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE   F+++K
Sbjct:   220 AERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE---FLSMK 272

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2079676 AT3G07340 "AT3G07340" [Arabidopsis thaliana (taxid:3702)]

 Score = 311 (114.5 bits), Expect = 6.6e-35, Sum P(2) = 6.6e-35
 Identities = 63/89 (70%), Positives = 77/89 (86%)

Query:   245 DSSLSGEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVM 304
             D + S +  K+YIH+RA+RGQAT+SHSLAERVRREKISERM+LLQ+LVPGCNK+TGKA+M
Sbjct:   244 DKTKSIDPYKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALM 303

Query:   305 LDEIINYVQSLQQQVEVCYFMAVKWRHFN 333
             LDEIINYVQSLQ+QVE   F+++K    N
Sbjct:   304 LDEIINYVQSLQRQVE---FLSMKLSSVN 329

GO:0003677 "DNA binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2152551 AT5G48560 "AT5G48560" [Arabidopsis thaliana (taxid:3702)]

 Score = 315 (115.9 bits), Expect = 9.5e-34, Sum P(2) = 9.5e-34
 Identities = 62/83 (74%), Positives = 74/83 (89%)

Query:   251 EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 310
             E PK+YIH+RA+RGQAT+SHSLAERVRREKI ERM+LLQ+LVPGCNK+TGKA+MLDEIIN
Sbjct:   293 EPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIIN 352

Query:   311 YVQSLQQQVEVCYFMAVKWRHFN 333
             YVQSLQ+QVE   F+++K    N
Sbjct:   353 YVQSLQRQVE---FLSMKLSSVN 372

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

UNIPROTKB|Q5N802 P0004D12.24 "BHLH transcription factor" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
 Identities = 107/268 (39%), Positives = 140/268 (52%)

Query:    83 PVALENQGMSSTSNLDQYSSDPSFVELVPKIPGF------GSGNFSEM-VSSFGLPENAQ 135
             P+ LEN  +    +LDQ+ +DP F E   ++ GF      G G +     + FGLP+   
Sbjct:   103 PI-LEN--LMPMGHLDQFLADPGFAERAARLSGFDARGGGGGGGYGGAGPAQFGLPDAGA 159

Query:   136 IASSGCPPNYVPNKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLN 195
               +S         KE     N+R+ S   +      E     A++G  RKR         
Sbjct:   160 AGAS---------KE-MELGNTRDESSVSDPAPGGAEIPPKGASDGNARKRKASGKGK-G 208

Query:   196 TDKNVEVELQKDPSGDSSGI-LXXXXXXXXXXXXNTG------ANMRGKQAAKPTKDSSL 248
              D  +     K+   DSSG               N+G      +N       K  KDSS 
Sbjct:   209 KDSPMSTSAAKE---DSSGKRCKSTEESNAAAEENSGKGKAAQSNSENGGGKKQGKDSSS 265

Query:   249 SG-EAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDE 307
                E PK+YIH+RA+RG+AT+SHSLAERVRREKIS+RM+LLQ+LVPGCNK+ GKAVMLDE
Sbjct:   266 KPPEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDE 325

Query:   308 IINYVQSLQQQVEVCYFMAVKWRHFNLQ 335
             IINYVQSLQ+QVE   F+++K    N Q
Sbjct:   326 IINYVQSLQRQVE---FLSMKLATVNPQ 350

GO:0005634 "nucleus" evidence=IC

UNIPROTKB|Q5VR96 P0038C05.31-1 "Os06g0275600 protein" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 102/261 (39%), Positives = 132/261 (50%)

Query:    90 GMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSS-F-GLPENAQIASSGCPPNYVP 147
             GM S      + + P FV+     P +  GN   M++  F G+ +      +G  P    
Sbjct:    79 GMLSAGAPPPFVATPGFVDSTAGFPCYNGGNLGAMINHPFPGIHQPLGDFQNGVEP--CR 136

Query:   148 NKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKD 207
               E      S+NVSQ+ E  Q   E    V ++ K     P  N     D+   V   K 
Sbjct:   137 EIEDIEIEGSKNVSQTGEKQQGDGETTHAVDSSSKELSM-PGRNGGAGHDEGTRVSCSKK 195

Query:   208 P--SGDSSGI--------LXXXXXXXXXXXXNTGANMR-----GKQAAKPTKDSSLSGEA 252
                SG   G+        L              G   R     GK + K  KD++  G  
Sbjct:   196 RKRSGQDGGVKHAEGGEQLATVGSAQKNEDDEKGEPKRSSVASGKSSGKQIKDNA--GSP 253

Query:   253 PKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYV 312
              ++YIH+RA+RGQATNSHSLAERVRREKISERM+ LQ+LVPGC+K+TGKAVMLDEIINYV
Sbjct:   254 KEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYV 313

Query:   313 QSLQQQVEVCYFMAVKWRHFN 333
             QSLQ+QVE   F+++K    N
Sbjct:   314 QSLQRQVE---FLSMKLASVN 331

GO:0005634 "nucleus" evidence=IC

UNIPROTKB|Q69JJ6 OSJNBa0026C08.22 "TA1 protein-like" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
 Identities = 90/234 (38%), Positives = 124/234 (52%)

Query:    97 LDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQ-IASSGCPPNYVPNKEGCYER 155
             L  +  D  F+E   +   FG G  +     +G  + A   A  G     + +       
Sbjct:    94 LGHFPVDSGFIERAARSTCFGGGMMAG--GPYGAADQAMGDAFGGTAEGLMDHHRNVGND 151

Query:   156 NSRNVSQSYEDHQICEEAAIG-VATNGKTRKRAPESNSLLNTDKNVEVELQKDPSGDSSG 214
              +   + +  D     E A G  ++ G   K+    N ++ TD+     L  D + +S  
Sbjct:   152 KAEEFAGNGHDEVPSSEVAGGDCSSKGSDSKKRRRPNEVMGTDQVHSSNLPSDSANES-- 209

Query:   215 ILXXXXXXXXXXXXNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAE 274
             +               G   +GK  AK T +S       +EYIH+RA+RGQATNSHSLAE
Sbjct:   210 VHSKDKGEESSPATTNGGKSKGK-GAKETSESQ-----KEEYIHVRARRGQATNSHSLAE 263

Query:   275 RVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVK 328
             R+RREKISERM+LLQ+LVPGC+K+TGKAVMLDEIINYVQSLQ+QVE   F+++K
Sbjct:   264 RLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVE---FLSMK 314

GO:0005634 "nucleus" evidence=IC

TAIR|locus:2205420 AT1G68920 [Arabidopsis thaliana (taxid:3702)]

 Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
 Identities = 85/180 (47%), Positives = 110/180 (61%)

Query:   157 SRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNS-LLNTDKNVEVELQKDPSGDSSGI 215
             S NVS+  +      +     ++N K RKR  + NS    + ++ + E + D +GD    
Sbjct:   211 SGNVSEDTQSSGGNGQKGRETSSNTKKRKRNGQKNSEAAQSHRSQQSEEEPDNNGDEKRN 270

Query:   216 LXXXXXXXXXXXXNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQATNSHSLAER 275
                          N+G   +GKQ++ P KD          YIH+RA+RGQATNSHSLAER
Sbjct:   271 -DEQSPNSPGKKSNSG-KQQGKQSSDPPKDG---------YIHVRARRGQATNSHSLAER 319

Query:   276 VRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFNLQ 335
             VRREKISERM+ LQ+LVPGCNK+TGKAVMLDEIINYVQSLQ+QVE   F+++K    N Q
Sbjct:   320 VRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE---FLSMKLATVNPQ 376

GO:0005634 "nucleus" evidence=ISM

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2095198 AT3G23690 "AT3G23690" [Arabidopsis thaliana (taxid:3702)]

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 97/251 (38%), Positives = 131/251 (52%)

Query:    81 SYPVALENQGMSSTSNLDQYSSDPSFVELVP-KIPGFGSGNFSEMVSSFGLPENAQIASS 139
             S P    N+G      L +Y ++P   E+ P  +  F S N S++  +F  P +  I   
Sbjct:    19 SDPFGNGNEGTIGDF-LGRYCNNPQ--EISPLTLQSF-SLN-SQISENF--PISGGIRFP 71

Query:   140 GCPPNYVPNKE-GCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDK 198
               P  +  ++E G       +   S  D     +      +N + RK  P  N   +   
Sbjct:    72 PYPGQFGSDREFGSQPTTQESNKSSLLDPDSVSDRVHTTKSNSRKRKSIPSGNGKESPAS 131

Query:   199 NVEVELQKDPSGDSSGILXXXXXXXXXXXXNTGANMRGKQAAK-PTKDSSLSGEAPKEYI 257
             +         SG++ G               +  N   K  +K   KD +   EAPK+YI
Sbjct:   132 SSLTASNSKVSGENGG--SKGGKRSKQDVAGSSKNGVEKCDSKGDNKDDAKPPEAPKDYI 189

Query:   258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQ 317
             H+RA+RGQAT+SHSLAER RREKISERM LLQ+LVPGCN+ITGKAVMLDEIINYVQSLQ+
Sbjct:   190 HVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQR 249

Query:   318 QVEVCYFMAVK 328
             QVE   F+++K
Sbjct:   250 QVE---FLSMK 257

GO:0003677 "DNA binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2028804 CIB5 "AT1G26260" [Arabidopsis thaliana (taxid:3702)]

 Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
 Identities = 94/241 (39%), Positives = 124/241 (51%)

Query:    96 NLDQYSSDPSFVELVPKIPGFGSGNF--SEMVSSFGLPENAQI------ASSGCPPNYVP 147
             N+ Q+ +D  F+E   K   FG G    ++  SS G+P++  +        SG   +  P
Sbjct:    73 NMAQFPADSGFIERAAKFSFFGCGEMMMNQQQSSLGVPDSTGLFLQDTQIPSGSKLDNGP 132

Query:   148 NKEGCYERNSRNVSQSYEDHQICEEAAIGVATNGKTRKRAPESNSLLNTDKNVEVELQKD 207
               +       R+++   ED Q         A  G+T  +   S       K+ E E  K 
Sbjct:   133 LTDASKLVKERSINNVSEDSQSSGGNGHDDAKCGQTSSKGFSSKKRKRIGKDCEEEEDKK 192

Query:   208 PSGDSSGILXXXXXXXXXXXXNTGANMRGKQAAKPTKDSSLSGEAPKEYIHMRAKRGQAT 267
                + S                + AN    +  K   DS   G     YIHMRA+RGQAT
Sbjct:   193 QKDEQSP--------------TSNANKTNSE--KQPSDSLKDG-----YIHMRARRGQAT 231

Query:   268 NSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAV 327
             NSHSLAERVRREKISERM+ LQ+LVPGC+K+TGKAVMLDEIINYVQSLQ Q+E   F+++
Sbjct:   232 NSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIE---FLSM 288

Query:   328 K 328
             K
Sbjct:   289 K 289

GO:0003677 "DNA binding" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009911 "positive regulation of flower development" evidence=IGI

GO:0048513 "organ development" evidence=RCA

UNIPROTKB|Q84QW1 OJ1191_A10.109 "BHLH transcription factor(GBOF-1)-like" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 100/271 (36%), Positives = 136/271 (50%)

Query:    84 VALENQGMSSTSNLDQYSSDPSFVELVPKIPGFGSGNFSEMVSSFGLPENAQIASSGCPP 143
             VA    G      LD+   DP F E   ++  F +G    +   +G    A     G PP
Sbjct:    32 VAPGGGGGGGDCGLDKLCGDPGFAERAARLSSFNNGG-GGVGQRYG---GAGAGLFGMPP 87

Query:   144 NYVPNKEGCYERNSRNVSQ----SYEDHQICEE-----AAIGVATNGKTRK----RAPES 190
                 +  G   R + +VS     + +D     +     AA   A  GK ++       ES
Sbjct:    88 PAPGDFAGGGSREASSVSDPASSAMKDAAANAKKRKSTAAAAAAAKGKGKEPPVGEEKES 147

Query:   191 NSLLNTDKNVEVELQKDPSGDSSGILXXXXXXXXXXXXNTGANMRGK-QAAKPTKDSSLS 249
             +       N E E    P  + +G                G   +GK + AKP       
Sbjct:   148 DGKRCKTGNGEKESSVKPKAEQAG------SDSSVEDGGGGGQKQGKGKNAKPV------ 195

Query:   250 GEAPKEYIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEII 309
              E PK+Y+H+RA+RGQAT+SHSLAERVRRE+IS+RM++LQ+LVPGCNK+ GKA+MLDEII
Sbjct:   196 -EPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEII 254

Query:   310 NYVQSLQQQVEVCYFMAVKWRHFN-LQFTCL 339
             NYVQSLQ+QVE   F+++K    N L F+ L
Sbjct:   255 NYVQSLQRQVE---FLSMKLATVNPLDFSNL 282

GO:0005634 "nucleus" evidence=IC

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00050553 hypothetical protein (407 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	342
smart00353	53	smart00353, HLH, helix loop helix domain	9e-12
cd00083	60	cd00083, HLH, Helix-loop-helix domain, found in sp	8e-11
pfam00010	52	pfam00010, HLH, Helix-loop-helix DNA-binding domai	2e-08

>gnl|CDD|197674 smart00353, HLH, helix loop helix domain

 Score = 59.2 bits (144), Expect = 9e-12
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%)

Query: 271 SLAERVRREKISERMRLLQELVPGCNKITG--KAVMLDEIINYVQSLQQQVE 320
           +  ER RR KI+E    L+ L+P   K     KA +L   I Y++SLQ++++
Sbjct: 1   NARERRRRRKINEAFDELRSLLPTLPKNKKLSKAEILRLAIEYIKSLQEELQ 52

Length = 53

>gnl|CDD|238036 cd00083, HLH, Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long

 Score = 56.5 bits (137), Expect = 8e-11
 Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 2/60 (3%)

Query: 263 RGQATNSHSLAERVRREKISERMRLLQELVPGCNKITG--KAVMLDEIINYVQSLQQQVE 320
           R     +H+L ER RRE+I++    L+ L+P         KA +L + ++Y++SLQ+ ++
Sbjct: 1   RKSRREAHNLRERRRRERINDAFDELRSLLPTLPPSKKLSKAEILRKAVDYIKSLQELLQ 60

A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, dimerization creates a parallel, left-handed, four helix bundle; the basic region N-terminal to the first amphipathic helix mediates high-affinity DNA-binding; there are several groups of HLH proteins: those (E12/E47) which bind specific hexanucleotide sequences such as E-box (5-CANNTG-3) or StRE 5-ATCACCCCAC-3), those lacking the basic domain (Emc, Id) function as negative regulators since they fail to bind DNA, those (hairy, E(spl), deadpan) which repress transcription although they can bind specific hexanucleotide sequences such as N-box (5-CACGc/aG-3), those which have a COE domain (Collier/Olf-1/EBF) which is involved in both in dimerization and in DNA binding, and those which bind pentanucleotides ACGTG or GCGTG and have a PAS domain which allows the dimerization between PAS proteins, the binding of small molecules (e.g., dioxin), and interactions with non-PAS proteins. Length = 60

>gnl|CDD|215654 pfam00010, HLH, Helix-loop-helix DNA-binding domain

 Score = 49.4 bits (119), Expect = 2e-08
 Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 3/50 (6%)

Query: 269 SHSLAERVRREKISERMRLLQELVPGCN--KITGKAVMLDEIINYVQSLQ 316
           +H+  ER RR++I++    L+EL+P     K++ KA +L   I Y++ LQ
Sbjct: 4   AHNERERRRRDRINDAFEELRELLPTPPNKKLS-KAEILRLAIEYIKHLQ 52

Length = 52

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	342
cd00083	60	HLH Helix-loop-helix domain, found in specific DNA	99.35
smart00353	53	HLH helix loop helix domain.	99.28
PF00010	55	HLH: Helix-loop-helix DNA-binding domain only nucl	99.26
KOG1318	411	consensus Helix loop helix transcription factor EB	99.14
KOG1319	229	consensus bHLHZip transcription factor BIGMAX [Tra	98.9
KOG4304	250	consensus Transcriptional repressors of the hairy/	98.38
KOG3561	803	consensus Aryl-hydrocarbon receptor nuclear transl	98.01
KOG2588	953	consensus Predicted DNA-binding protein [Transcrip	97.86
KOG2483	232	consensus Upstream transcription factor 2/L-myc-2	97.78
PLN03217	93	transcription factor ATBS1; Provisional	97.56
KOG0561	373	consensus bHLH transcription factor [Transcription	97.11
KOG4029	228	consensus Transcription factor HAND2/Transcription	96.57
KOG3960	284	consensus Myogenic helix-loop-helix transcription	96.35
KOG3910	632	consensus Helix loop helix transcription factor [T	95.47
KOG4447	173	consensus Transcription factor TWIST [Transcriptio	88.54
KOG3558	768	consensus Hypoxia-inducible factor 1/Neuronal PAS	83.2
KOG3560	712	consensus Aryl-hydrocarbon receptor [Transcription	80.56

>cd00083 HLH Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long

Probab=99.35  E-value=8.8e-13  Score=96.53  Aligned_cols=55  Identities=35%  Similarity=0.589  Sum_probs=49.5

Q ss_pred             cCCcchhhHHHHHHHHHHHHHHHhccCCCC--CcCCChhhHHHHHHHHHHHHHHHHH
Q 019338          266 ATNSHSLAERVRREKISERMRLLQELVPGC--NKITGKAVMLDEIINYVQSLQQQVE  320 (342)
Q Consensus       266 a~~~HslaERrRRekIner~~~Lq~LVP~~--~K~~dKAsIL~eaIdYIk~LQ~qVq  320 (342)
                      .+..|+..||+||++||+.|..|+.|||.+  ...++|+.||+.||+||++|+.+++
T Consensus         4 ~r~~~~~~Er~RR~~~n~~~~~L~~llp~~~~~~k~~k~~iL~~a~~yI~~L~~~~~   60 (60)
T cd00083           4 RREAHNLRERRRRERINDAFDELRSLLPTLPPSKKLSKAEILRKAVDYIKSLQELLQ   60 (60)
T ss_pred             HHHHHhHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhC
Confidence            346899999999999999999999999998  2445999999999999999999863

A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, dimerization creates a parallel, left-handed, four helix bundle; the basic region N-terminal to the first amphipathic helix mediates high-affinity DNA-binding; there are several groups of HLH proteins: those (E12/E47) which bind specific hexanucleotide sequences such as E-box (5-CANNTG-3) or StRE 5-ATCACCCCAC-3), those lacking the basic domain (Emc, Id) function as negative regulators since they fail to bind DNA, those (hairy, E(spl), deadpan) which repress transcription although they can bind specific hexanucleotide sequences such as N-box (5-CACGc/aG-3), those which have a COE domain (Collier/Olf-1/EBF) which is involved in both in dimerization and in DNA binding, and those which bind pentanucleotides ACGTG or GCGTG and

>smart00353 HLH helix loop helix domain

Probab=99.28  E-value=7.9e-12  Score=90.11  Aligned_cols=49  Identities=39%  Similarity=0.569  Sum_probs=44.5

Q ss_pred             hhhHHHHHHHHHHHHHHHhccCCC---CCcCCChhhHHHHHHHHHHHHHHHHH
Q 019338          271 SLAERVRREKISERMRLLQELVPG---CNKITGKAVMLDEIINYVQSLQQQVE  320 (342)
Q Consensus       271 slaERrRRekIner~~~Lq~LVP~---~~K~~dKAsIL~eaIdYIk~LQ~qVq  320 (342)
                      ++.||+||++||+.|..|+.|||.   ..+ .+|++||+.||+||++|+.+++
T Consensus         1 n~~Er~RR~~~n~~~~~L~~lip~~~~~~k-~~k~~iL~~ai~yi~~L~~~~~   52 (53)
T smart00353        1 NARERRRRRKINEAFDELRSLLPTLPNNKK-LSKAEILRLAIEYIKSLQEELQ   52 (53)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHh
Confidence            468999999999999999999995   445 4999999999999999999986

>PF00010 HLH: Helix-loop-helix DNA-binding domain only nuclear translocator protein (Arnt)

Probab=99.26  E-value=8.2e-12  Score=91.46  Aligned_cols=49  Identities=37%  Similarity=0.695  Sum_probs=45.1

Q ss_pred             CcchhhHHHHHHHHHHHHHHHhccCCCC----CcCCChhhHHHHHHHHHHHHH
Q 019338          268 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ  316 (342)
Q Consensus       268 ~~HslaERrRRekIner~~~Lq~LVP~~----~K~~dKAsIL~eaIdYIk~LQ  316 (342)
                      ..|+..||+||++||+.|..|+.|||.+    ...++|+.||+.||+||++||
T Consensus         3 ~~h~~~Er~RR~~i~~~~~~L~~llp~~~~~~~~k~~K~~iL~~ai~yI~~Lq   55 (55)
T PF00010_consen    3 QKHNERERRRRDRINDCFDELRELLPSCSAGSSRKLSKASILQKAIDYIKQLQ   55 (55)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCCSSHHCCTTSSSSHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhccchhccccccCCHHHHHHHHHHHHHHhC
Confidence            5799999999999999999999999987    233699999999999999997

; InterPro: IPR011598 The helix-loop-helix (HLH) DNA-binding domain consists of a closed bundle of four helices in a left-handed twist with two crossover connections. The HLH domain directs dimerisation, and is juxtaposed to basic regions to create a DNA interaction interface surface that recognises specific DNA sequences. Basic region/HLH (bHLH) proteins regulate diverse biological pathways []. bHLH proteins include MyoD [], SREBPs (sterol regulatory element binding proteins) [], and yeast Pho4 (phosphatase system) []. In certain proteins the bHLH domain contains a leucine-zipper motif. The bHLH/leucine zipper (bHLHZip) domain specifies dimerisation within a network of proteins and determines sequence-specific DNA binding []. bHLHZip domains occur in the transcription factors Myc, Mad, Max and Usf [, ]. This entry is bHLHZip, which covers the bHLH domain and the leucine zipper motif, when present.; PDB: 1NLW_A 1NKP_D 1A93_A 2A93_A 1AM9_C 3U5V_A 1A0A_B 2QL2_C 1UKL_C 1AN4_B ....

>KOG1318 consensus Helix loop helix transcription factor EB [Transcription]

Probab=99.14  E-value=6.3e-11  Score=118.99  Aligned_cols=60  Identities=32%  Similarity=0.619  Sum_probs=51.8

Q ss_pred             cCCCcCCcchhhHHHHHHHHHHHHHHHhccCCCCCc---CCChhhHHHHHHHHHHHHHHHHHH
Q 019338          262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNK---ITGKAVMLDEIINYVQSLQQQVEV  321 (342)
Q Consensus       262 kr~~a~~~HslaERrRRekIner~~~Lq~LVP~~~K---~~dKAsIL~eaIdYIk~LQ~qVq~  321 (342)
                      |-.++++.|++.|||||++||++|++|..|||.|..   ..+|..||..+++||+.||+..+.
T Consensus       229 rdr~Krd~HNeVERRRR~nIN~~IkeLg~liP~~~~~~~~~nKgtILk~s~dYIr~Lqq~~q~  291 (411)
T KOG1318|consen  229 RDRRKRDNHNEVERRRRENINDRIKELGQLIPKCNSEDMKSNKGTILKASCDYIRELQQTLQR  291 (411)
T ss_pred             HHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCCCcchhhcccchhhHHHHHHHHHHHHHHHH
Confidence            334455899999999999999999999999999942   147999999999999999997663

>KOG1319 consensus bHLHZip transcription factor BIGMAX [Transcription]

Probab=98.90  E-value=1.1e-09  Score=100.74  Aligned_cols=65  Identities=29%  Similarity=0.455  Sum_probs=53.5

Q ss_pred             CCcchhhHHHHHHHHHHHHHHHhccCCCCCc------CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 019338          267 TNSHSLAERVRREKISERMRLLQELVPGCNK------ITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFNL  334 (342)
Q Consensus       267 ~~~HslaERrRRekIner~~~Lq~LVP~~~K------~~dKAsIL~eaIdYIk~LQ~qVq~l~~Ls~kl~~~n~  334 (342)
                      +..|.-+||+||+-|+..+..|+.|||.|..      ++.||.||..+|+||.+|.+++.   .--.++++||-
T Consensus        63 r~aHtqaEqkRRdAIk~GYddLq~LvP~cq~~ds~g~KlskA~ILqksidyi~~L~~~k~---kqe~e~s~L~k  133 (229)
T KOG1319|consen   63 RRAHTQAEQKRRDAIKRGYDDLQTLVPTCQQQDSIGQKLSKAIILQKTIDYIQFLHKEKK---KQEEEVSTLRK  133 (229)
T ss_pred             HHHHHHHHHHHHHHHHhchHHHHHhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence            4689999999999999999999999998742      24799999999999999998766   44445554443

>KOG4304 consensus Transcriptional repressors of the hairy/E(spl) family (contains HLH) [Transcription]

Probab=98.38  E-value=2e-07  Score=88.68  Aligned_cols=52  Identities=29%  Similarity=0.455  Sum_probs=46.7

Q ss_pred             CcchhhHHHHHHHHHHHHHHHhccCCCC--------CcCCChhhHHHHHHHHHHHHHHHHH
Q 019338          268 NSHSLAERVRREKISERMRLLQELVPGC--------NKITGKAVMLDEIINYVQSLQQQVE  320 (342)
Q Consensus       268 ~~HslaERrRRekIner~~~Lq~LVP~~--------~K~~dKAsIL~eaIdYIk~LQ~qVq  320 (342)
                      ..|-+.|||||+|||+.|.+|++|||.+        .| .+||.||+-|++|++.||.+.+
T Consensus        34 ~~Kpl~EKkRRaRIN~~L~eLK~Li~e~~~~~~~~~sk-lEKAdILEltV~hL~~l~~~~~   93 (250)
T KOG4304|consen   34 VRKPLLEKKRRARINRCLDELKDLIPEALKKDGQRHSK-LEKADILELTVNHLRQLQRSQQ   93 (250)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhh-hHHHHHHHHHHHHHHHHhcccc
Confidence            5788999999999999999999999965        34 3899999999999999998765

>KOG3561 consensus Aryl-hydrocarbon receptor nuclear translocator [Transcription]

Probab=98.01  E-value=5.3e-06  Score=89.75  Aligned_cols=52  Identities=21%  Similarity=0.375  Sum_probs=48.4

Q ss_pred             CCcchhhHHHHHHHHHHHHHHHhccCCCCC---cCCChhhHHHHHHHHHHHHHHH
Q 019338          267 TNSHSLAERVRREKISERMRLLQELVPGCN---KITGKAVMLDEIINYVQSLQQQ  318 (342)
Q Consensus       267 ~~~HslaERrRRekIner~~~Lq~LVP~~~---K~~dKAsIL~eaIdYIk~LQ~q  318 (342)
                      +..|+.+|||||+++|.-|.+|-+|||.|.   .++||-+||..||..|+.++.+
T Consensus        21 Re~~~~~EKrRRdq~N~yI~ELs~Mvp~~~~~~RK~DK~tVLr~aV~~lr~~k~~   75 (803)
T KOG3561|consen   21 RENRSEIEKRRRDQMNKYIEELSEMVPTNASLSRKPDKLTVLRMAVDHLRLIKEQ   75 (803)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHhhhcchhcccCchHHHHHHHHHHHHHHHhhh
Confidence            479999999999999999999999999997   5569999999999999999885

>KOG2588 consensus Predicted DNA-binding protein [Transcription]

Probab=97.86  E-value=1e-05  Score=88.39  Aligned_cols=66  Identities=24%  Similarity=0.430  Sum_probs=56.8

Q ss_pred             CcCCcchhhHHHHHHHHHHHHHHHhccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019338          265 QATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWR  330 (342)
Q Consensus       265 ~a~~~HslaERrRRekIner~~~Lq~LVP~~~K~~dKAsIL~eaIdYIk~LQ~qVq~l~~Ls~kl~  330 (342)
                      ..+..|+++|||-|..||++|..|++|||+..-+..|..+|..||+||++||..-+.+....+.+.
T Consensus       275 ~kRtAHN~IEKRYRsSINDKI~eLk~lV~g~~aKl~kSavLr~ai~~i~dl~~~nq~lk~~~~~l~  340 (953)
T KOG2588|consen  275 EKRTAHNIIEKRYRSSINDKIIELKDLVPGTEAKLNKSAVLRKAIDYIEDLQGYNQKLKLENASLR  340 (953)
T ss_pred             cccchhhHHHHHhhcchhHHHHHHHHhcCccHhhhhhhhhHHHHHHHHHHhhccccccchhhhhhh
Confidence            457899999999999999999999999998876669999999999999999998776555444433

>KOG2483 consensus Upstream transcription factor 2/L-myc-2 protein [Transcription]

Probab=97.78  E-value=4.9e-05  Score=72.06  Aligned_cols=54  Identities=26%  Similarity=0.377  Sum_probs=46.5

Q ss_pred             CCcchhhHHHHHHHHHHHHHHHhccCCCCCcCCC--hhhHHHHHHHHHHHHHHHHH
Q 019338          267 TNSHSLAERVRREKISERMRLLQELVPGCNKITG--KAVMLDEIINYVQSLQQQVE  320 (342)
Q Consensus       267 ~~~HslaERrRRekIner~~~Lq~LVP~~~K~~d--KAsIL~eaIdYIk~LQ~qVq  320 (342)
                      +..|+..||+||..|.+.|..|+.+||.....+.  .++||+.|+.||+.|+.+..
T Consensus        60 R~~HN~LEk~RRahlk~~~~~Lk~~vP~~~~~~~~t~lsiL~kA~~~i~~l~~~~~  115 (232)
T KOG2483|consen   60 RAHHNALEKRRRAHLKDCFESLKDSVPLLNGETRSTTLSILDKALEHIQSLERKSA  115 (232)
T ss_pred             hhhhhhhhHHHHHHHHHHHHHHHHhCCCCCCcchhhhhHhhhhHHHHHHHHHhHHH
Confidence            4699999999999999999999999996543322  58999999999999998655

>PLN03217 transcription factor ATBS1; Provisional

Probab=97.56  E-value=0.00019  Score=59.24  Aligned_cols=53  Identities=25%  Similarity=0.522  Sum_probs=42.5

Q ss_pred             HHHHHHHHHHHHHHhccCCCC------CcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 019338          275 RVRREKISERMRLLQELVPGC------NKITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRH  331 (342)
Q Consensus       275 RrRRekIner~~~Lq~LVP~~------~K~~dKAsIL~eaIdYIk~LQ~qVq~l~~Ls~kl~~  331 (342)
                      |-=-+.|++-+..||.|+|..      .++ .-+-+|+||.+||+.|+++|.   .|++.|..
T Consensus        16 risddqi~dLvsKLq~llPe~r~~r~s~k~-saskvLqEtC~YIrsLhrEvD---dLSerLs~   74 (93)
T PLN03217         16 RISEDQINDLIIKLQQLLPELRDSRRSDKV-SAARVLQDTCNYIRNLHREVD---DLSERLSE   74 (93)
T ss_pred             CCCHHHHHHHHHHHHHHChHHHhhhccccc-cHHHHHHHHHHHHHHHHHHHH---HHHHHHHH
Confidence            333578999999999999953      343 677799999999999999999   66665553

>KOG0561 consensus bHLH transcription factor [Transcription]

Probab=97.11  E-value=0.0002  Score=70.62  Aligned_cols=52  Identities=25%  Similarity=0.437  Sum_probs=46.2

Q ss_pred             CcchhhHHHHHHHHHHHHHHHhccCCC--CCcCCChhhHHHHHHHHHHHHHHHHH
Q 019338          268 NSHSLAERVRREKISERMRLLQELVPG--CNKITGKAVMLDEIINYVQSLQQQVE  320 (342)
Q Consensus       268 ~~HslaERrRRekIner~~~Lq~LVP~--~~K~~dKAsIL~eaIdYIk~LQ~qVq  320 (342)
                      ..-+..||||=.-||-.|..||.|+|.  +.|+ .||.||+.+.+||..|+.+..
T Consensus        62 eIANsNERRRMQSINAGFqsLr~LlPr~eGEKL-SKAAILQQTa~yI~~Le~~Kt  115 (373)
T KOG0561|consen   62 EIANSNERRRMQSINAGFQSLRALLPRKEGEKL-SKAAILQQTADYIHQLEGHKT  115 (373)
T ss_pred             HhhcchHHHHHHhhhHHHHHHHHhcCcccchhh-HHHHHHHHHHHHHHHHHhccc
Confidence            455677999999999999999999995  4665 999999999999999998765

>KOG4029 consensus Transcription factor HAND2/Transcription factor TAL1/TAL2/LYL1 [Transcription]

Probab=96.57  E-value=0.0022  Score=59.60  Aligned_cols=53  Identities=21%  Similarity=0.303  Sum_probs=45.9

Q ss_pred             CcchhhHHHHHHHHHHHHHHHhccCCCC---CcCCChhhHHHHHHHHHHHHHHHHH
Q 019338          268 NSHSLAERVRREKISERMRLLQELVPGC---NKITGKAVMLDEIINYVQSLQQQVE  320 (342)
Q Consensus       268 ~~HslaERrRRekIner~~~Lq~LVP~~---~K~~dKAsIL~eaIdYIk~LQ~qVq  320 (342)
                      ..++..||.|=.-+|..|..||.+||..   .|+..|..+|..||.||++|+.-++
T Consensus       111 ~~~n~RER~Rv~~vN~~f~~Lr~~lP~~~~~~kklSKveTLr~A~~YI~~L~~lL~  166 (228)
T KOG4029|consen  111 QARNARERQRVQSVNSAFAELRALLPTEPPQSKKLSKVETLRLATSYIRYLTKLLA  166 (228)
T ss_pred             hhhhhhhhhcccchhhhhHHHHhcCCCCCCcccccCcccchHHHHHHHHHHHHHhc
Confidence            4566679999999999999999999942   4456999999999999999998766

>KOG3960 consensus Myogenic helix-loop-helix transcription factor [Transcription]

Probab=96.35  E-value=0.0072  Score=58.49  Aligned_cols=52  Identities=25%  Similarity=0.375  Sum_probs=44.0

Q ss_pred             cchhhHHHHHHHHHHHHHHHhc-cCCCCCcCCChhhHHHHHHHHHHHHHHHHH
Q 019338          269 SHSLAERVRREKISERMRLLQE-LVPGCNKITGKAVMLDEIINYVQSLQQQVE  320 (342)
Q Consensus       269 ~HslaERrRRekIner~~~Lq~-LVP~~~K~~dKAsIL~eaIdYIk~LQ~qVq  320 (342)
                      .-.+.||||=.|+||-|.+|+. -+++-++-.-|.-||.-||+||..||.-++
T Consensus       121 AATMRERRRLkKVNEAFE~LKRrT~~NPNQRLPKVEILRsAI~YIE~Lq~LL~  173 (284)
T KOG3960|consen  121 AATMRERRRLKKVNEAFETLKRRTSSNPNQRLPKVEILRSAIRYIERLQALLQ  173 (284)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCccccccHHHHHHHHHHHHHHHHHHHH
Confidence            4457799999999999999975 446666555899999999999999998777

>KOG3910 consensus Helix loop helix transcription factor [Transcription]

Probab=95.47  E-value=0.014  Score=61.13  Aligned_cols=66  Identities=27%  Similarity=0.359  Sum_probs=53.1

Q ss_pred             CCcchhhHHHHHHHHHHHHHHHhccCCC---CCcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccc
Q 019338          267 TNSHSLAERVRREKISERMRLLQELVPG---CNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFNLQFTCLV  340 (342)
Q Consensus       267 ~~~HslaERrRRekIner~~~Lq~LVP~---~~K~~dKAsIL~eaIdYIk~LQ~qVq~l~~Ls~kl~~~n~~~~~l~  340 (342)
                      +...+..||.|=.-|||-|++|..+.--   ..|.--|..||..|+.-|-.|++||+        -..|||...||.
T Consensus       527 R~aNNARERlRVRDINeAfKELGRMCqlHlkSeKpQTKLgILhqAVsVIlsLEQQVR--------ERNLNPKaaclk  595 (632)
T KOG3910|consen  527 RMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQTKLGILHQAVSVILSLEQQVR--------ERNLNPKAACLK  595 (632)
T ss_pred             HhhhhhhhheehhhHHHHHHHHHHHHHHhhcccCcchhhhHHHHHHHHHHHHHHHHH--------HccCChhhhhhh
Confidence            3678888999999999999999998752   23333589999999999999999998        246677666663

>KOG4447 consensus Transcription factor TWIST [Transcription]

Probab=88.54  E-value=0.25  Score=45.08  Aligned_cols=52  Identities=23%  Similarity=0.387  Sum_probs=44.2

Q ss_pred             CcchhhHHHHHHHHHHHHHHHhccCCCC--CcCCChhhHHHHHHHHHHHHHHHHH
Q 019338          268 NSHSLAERVRREKISERMRLLQELVPGC--NKITGKAVMLDEIINYVQSLQQQVE  320 (342)
Q Consensus       268 ~~HslaERrRRekIner~~~Lq~LVP~~--~K~~dKAsIL~eaIdYIk~LQ~qVq  320 (342)
                      --|++-||+|-..+|+-|..||.++|..  .|. .|.--|+-|-.||-+|=+-.+
T Consensus        80 v~anvrerqRtqsLn~AF~~lr~iiptlPsdkl-SkiqtLklA~ryidfl~~vl~  133 (173)
T KOG4447|consen   80 VMANVRERQRTQSLNEAFAALRKIIPTLPSDKL-SKIQTLKLAARYIDFLYQVLQ  133 (173)
T ss_pred             HHHHHHHHHhhhhHHHHHHHHHhhcCCCCcccc-ccccchhhcccCCchhhhccc
Confidence            4789999999999999999999999964  564 788889999999998865433

>KOG3558 consensus Hypoxia-inducible factor 1/Neuronal PAS domain protein NPAS1 [Signal transduction mechanisms; Transcription]

Probab=83.20  E-value=0.86  Score=49.75  Aligned_cols=43  Identities=30%  Similarity=0.383  Sum_probs=37.0

Q ss_pred             hhhHHHHHHHHHHHHHHHhccCCCC----CcCCChhhHHHHHHHHHHH
Q 019338          271 SLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQS  314 (342)
Q Consensus       271 slaERrRRekIner~~~Lq~LVP~~----~K~~dKAsIL~eaIdYIk~  314 (342)
                      --+.|.||.|=|+-|.+|..++|--    ..+ |||+|+.-||-|++-
T Consensus        51 RdAARsRRsKEn~~FyeLa~~lPlp~aisshL-DkaSimRLtISyLRl   97 (768)
T KOG3558|consen   51 RDAARSRRSKENEEFYELAKLLPLPAAISSHL-DKASIMRLTISYLRL   97 (768)
T ss_pred             hhhhhhhcccchHHHHHHHHhCCCcchhhhhh-hhHHHHHHHHHHHHH
Confidence            3468999999999999999999932    454 999999999999873

>KOG3560 consensus Aryl-hydrocarbon receptor [Transcription]

Probab=80.56  E-value=1.4  Score=47.22  Aligned_cols=39  Identities=21%  Similarity=0.439  Sum_probs=34.3

Q ss_pred             HHHHHHHHHHHHHHHhccCCC----CCcCCChhhHHHHHHHHHH
Q 019338          274 ERVRREKISERMRLLQELVPG----CNKITGKAVMLDEIINYVQ  313 (342)
Q Consensus       274 ERrRRekIner~~~Lq~LVP~----~~K~~dKAsIL~eaIdYIk  313 (342)
                      -+|-|+|+|-.+..|..|+|-    .+|+ ||.+||.-++-|++
T Consensus        33 SKRHRdRLNaELD~lAsLLPfpqdiisKL-DkLSVLRLSVSyLr   75 (712)
T KOG3560|consen   33 SKRHRDRLNAELDHLASLLPFPQDIISKL-DKLSVLRLSVSYLR   75 (712)
T ss_pred             chhHHHHhhhHHHHHHHhcCCCHHHHhhh-hhhhhhhhhHHHHH
Confidence            467789999999999999994    4776 99999999999986

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	342
1am9_A	82	Srebp-1A, protein (sterol regulatory element bindi	9e-17
1an4_A	65	Protein (upstream stimulatory factor); protein-DNA	6e-09
1nkp_B	83	MAX protein, MYC proto-oncogene protein; transcrip	7e-07
1nkp_A	88	C-MYC, MYC proto-oncogene protein; transcription,	8e-07
1hlo_A	80	Protein (transcription factor MAX); transcriptiona	9e-07
1a0a_A	63	BHLH, protein (phosphate system positive regulator	7e-04

>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C Length = 82

 Score = 73.2 bits (180), Expect = 9e-17
 Identities = 16/59 (27%), Positives = 33/59 (55%)

Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
            RG+   +H+  E+  R  I++++  L++LV G      K+ +L + I+Y++ LQ   +
Sbjct: 2   SRGEKRTAHNAIEKRYRSSINDKIIELKDLVVGTEAKLNKSAVLRKAIDYIRFLQHSNQ 60

>1an4_A Protein (upstream stimulatory factor); protein-DNA complex, double helix, overhanging base, transcription/DNA complex; HET: DNA; 2.90A {Homo sapiens} SCOP: a.38.1.1 Length = 65

 Score = 50.8 bits (122), Expect = 6e-09
 Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 5/57 (8%)

Query: 269 SHSLAERVRREKISERMRLLQELVPGCNKITG-----KAVMLDEIINYVQSLQQQVE 320
            H+  ER RR+KI+  +  L +++P  +  +      K  +L +  +Y+Q L+Q   
Sbjct: 8   QHNEVERRRRDKINNWIVQLSKIIPDSSMESTKSGQSKGGILSKASDYIQELRQSNH 64

>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B Length = 83

 Score = 45.8 bits (109), Expect = 7e-07
 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 3/52 (5%)

Query: 269 SHSLAERVRREKISERMRLLQELVPGCN--KITGKAVMLDEIINYVQSLQQQ 318
            H+  ER RR+ I +    L++ VP     K + +A +LD+   Y+Q ++++
Sbjct: 5   HHNALERKRRDHIKDSFHSLRDSVPSLQGEKAS-RAQILDKATEYIQYMRRK 55

>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 Length = 88

 Score = 45.4 bits (108), Expect = 8e-07
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 8/66 (12%)

Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCN---KITGKAVMLDEIINYVQS 314
           HM  KR     +H++ ER RR ++      L++ +P      K   K V+L +   Y+ S
Sbjct: 2   HMNVKR----RTHNVLERQRRNELKRSFFALRDQIPELENNEKAP-KVVILKKATAYILS 56

Query: 315 LQQQVE 320
           +Q + +
Sbjct: 57  VQAEEQ 62

>1hlo_A Protein (transcription factor MAX); transcriptional regulation, DNA binding, complex (transcription factor MAX/DNA), transcription/DNA complex; HET: DNA; 2.80A {Homo sapiens} SCOP: a.38.1.1 Length = 80

 Score = 45.0 bits (107), Expect = 9e-07
 Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 269 SHSLAERVRREKISERMRLLQELVPGCNKI-TGKAVMLDEIINYVQSLQQQVE 320
            H+  ER RR+ I +    L++ VP        +A +LD+   Y+Q ++++  
Sbjct: 15  HHNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNH 67

>1a0a_A BHLH, protein (phosphate system positive regulatory protein PHO4); transcription factor, basic helix loop helix; HET: DNA; 2.80A {Saccharomyces cerevisiae} SCOP: a.38.1.1 Length = 63

 Score = 36.3 bits (84), Expect = 7e-04
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 6/59 (10%)

Query: 268 NSHSLAERVRREKISERMRLLQELVPGCNK------ITGKAVMLDEIINYVQSLQQQVE 320
            SH  AE+ RR +++  +  L  L+P   K         KA  ++    Y++ LQQ   
Sbjct: 4   ESHKHAEQARRNRLAVALHELASLIPAEWKQQNVSAAPSKATTVEAACRYIRHLQQNGS 62

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	342
1am9_A	82	Srebp-1A, protein (sterol regulatory element bindi	99.63
4ati_A	118	MITF, microphthalmia-associated transcription fact	99.62
1a0a_A	63	BHLH, protein (phosphate system positive regulator	99.52
4h10_B	71	Circadian locomoter output cycles protein kaput; B	99.52
1an4_A	65	Protein (upstream stimulatory factor); protein-DNA	99.5
4h10_A	73	ARYL hydrocarbon receptor nuclear translocator-LI	99.47
1nkp_B	83	MAX protein, MYC proto-oncogene protein; transcrip	99.42
1hlo_A	80	Protein (transcription factor MAX); transcriptiona	99.41
1nkp_A	88	C-MYC, MYC proto-oncogene protein; transcription,	99.37
3u5v_A	76	Protein MAX, transcription factor E2-alpha chimer;	99.26
1nlw_A	80	MAD protein, MAX dimerizer; transcription factor,	99.22
4f3l_A	361	Mclock, circadian locomoter output cycles protein	98.9
1mdy_A	68	Protein (MYOD BHLH domain); protein-DNA complex, t	98.86
2ql2_B	60	Neurod1, neurogenic differentiation factor 1; basi	98.8
4f3l_B	387	BMAL1B; BHLH, PAS, circadian rhythm proteins, tran	98.79
4ath_A	83	MITF, microphthalmia-associated transcription fact	98.66
2lfh_A	68	DNA-binding protein inhibitor ID-3; structural gen	98.31
4aya_A	97	DNA-binding protein inhibitor ID-2; cell cycle; 2.	97.6

>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C

Probab=99.63  E-value=1.2e-16  Score=126.48  Aligned_cols=67  Identities=21%  Similarity=0.327  Sum_probs=58.4

Q ss_pred             cCCcchhhHHHHHHHHHHHHHHHhccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 019338          266 ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFNLQ  335 (342)
Q Consensus       266 a~~~HslaERrRRekIner~~~Lq~LVP~~~K~~dKAsIL~eaIdYIk~LQ~qVq~l~~Ls~kl~~~n~~  335 (342)
                      .+..|+++||+||++||++|..|++|||++..+++|++||++||+||++||.+++   .|..+.+.+...
T Consensus         6 rr~~H~~~ErrRR~~in~~f~~L~~lvP~~~~k~~Ka~IL~~Ai~YI~~Lq~~~~---~L~~e~~~L~~~   72 (82)
T 1am9_A            6 KRTAHNAIEKRYRSSINDKIIELKDLVVGTEAKLNKSAVLRKAIDYIRFLQHSNQ---KLKQENLSLRTA   72 (82)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
T ss_pred             HHHhhhhHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Confidence            4579999999999999999999999999985556999999999999999999999   666666655443

>4ati_A MITF, microphthalmia-associated transcription factor; DNA-binding protein-DNA complex, melanoma; 2.60A {Mus musculus} PDB: 4atk_A

Probab=99.62  E-value=3.2e-16  Score=131.88  Aligned_cols=70  Identities=29%  Similarity=0.425  Sum_probs=50.3

Q ss_pred             cccccccCCCcCCcchhhHHHHHHHHHHHHHHHhccCCCCCc---CCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 019338          256 YIHMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGCNK---ITGKAVMLDEIINYVQSLQQQVEVCYFM  325 (342)
Q Consensus       256 ~i~~rakr~~a~~~HslaERrRRekIner~~~Lq~LVP~~~K---~~dKAsIL~eaIdYIk~LQ~qVq~l~~L  325 (342)
                      ..+..+++.+++..|+++||+||++||++|..|++|||+|.+   +++|++||+.||+||++||.+++.|..+
T Consensus        17 ~~~~~~k~~~kr~~Hn~~ERrRR~~In~~~~~L~~lvP~~~~~~~k~~Ka~IL~~aieYIk~Lq~~~~~l~~~   89 (118)
T 4ati_A           17 EARALAKERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKDL   89 (118)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHHHHSCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            445567777888999999999999999999999999999853   2589999999999999999999966655

>1a0a_A BHLH, protein (phosphate system positive regulatory protein PHO4); transcription factor, basic helix loop helix; HET: DNA; 2.80A {Saccharomyces cerevisiae} SCOP: a.38.1.1

Probab=99.52  E-value=2e-15  Score=114.56  Aligned_cols=54  Identities=30%  Similarity=0.447  Sum_probs=48.4

Q ss_pred             CCcchhhHHHHHHHHHHHHHHHhccCCCCCc------CCChhhHHHHHHHHHHHHHHHHH
Q 019338          267 TNSHSLAERVRREKISERMRLLQELVPGCNK------ITGKAVMLDEIINYVQSLQQQVE  320 (342)
Q Consensus       267 ~~~HslaERrRRekIner~~~Lq~LVP~~~K------~~dKAsIL~eaIdYIk~LQ~qVq  320 (342)
                      +.+|+++||+||++||..|..|+.|||.+.+      +.+||.||+.||+||+.||++|+
T Consensus         3 r~~H~~aEr~RR~rIn~~~~~L~~LlP~~~~~~~~~~k~sKa~iL~~Ai~YIk~Lq~~~~   62 (63)
T 1a0a_A            3 RESHKHAEQARRNRLAVALHELASLIPAEWKQQNVSAAPSKATTVEAACRYIRHLQQNGS   62 (63)
T ss_dssp             TTGGGGGTHHHHHHHHHHHHHHHHTSCHHHHTSSCCCCSCTTHHHHHHHHHHHHHHTCSC
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHCCCcccccccCCcccHHHHHHHHHHHHHHHHHHhh
Confidence            4799999999999999999999999997633      23699999999999999998874

>4h10_B Circadian locomoter output cycles protein kaput; BHLH, circadian transcription, transcription-DNA complex; 2.40A {Homo sapiens}

Probab=99.52  E-value=7.5e-15  Score=114.40  Aligned_cols=55  Identities=18%  Similarity=0.381  Sum_probs=50.5

Q ss_pred             cCCcchhhHHHHHHHHHHHHHHHhccCCCCCcCCChhhHHHHHHHHHHHHHHHHH
Q 019338          266 ATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE  320 (342)
Q Consensus       266 a~~~HslaERrRRekIner~~~Lq~LVP~~~K~~dKAsIL~eaIdYIk~LQ~qVq  320 (342)
                      .+.+|+++||+||++||++|.+|+.|||++..++||++||+.||+||+.||.++.
T Consensus         8 kR~~Hn~iErrRRd~IN~~i~eL~~LvP~~~~K~dK~sIL~~aI~yik~Lq~~~~   62 (71)
T 4h10_B            8 KRVSRNKSEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRKHKEITA   62 (71)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTSSSCCSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhhhhhHHHhhHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHHHhhh
Confidence            3479999999999999999999999999865445999999999999999999987

>1an4_A Protein (upstream stimulatory factor); protein-DNA complex, double helix, overhanging base, transcription/DNA complex; HET: DNA; 2.90A {Homo sapiens} SCOP: a.38.1.1

Probab=99.50  E-value=4.8e-15  Score=111.83  Aligned_cols=56  Identities=27%  Similarity=0.433  Sum_probs=50.1

Q ss_pred             CcCCcchhhHHHHHHHHHHHHHHHhccCCCCCc-----CCChhhHHHHHHHHHHHHHHHHH
Q 019338          265 QATNSHSLAERVRREKISERMRLLQELVPGCNK-----ITGKAVMLDEIINYVQSLQQQVE  320 (342)
Q Consensus       265 ~a~~~HslaERrRRekIner~~~Lq~LVP~~~K-----~~dKAsIL~eaIdYIk~LQ~qVq  320 (342)
                      ..+..|+++||+||++||+.|..|+.|||.|..     +++|++||+.||+||++||.+.+
T Consensus         4 ~rr~~H~~~Er~RR~~in~~~~~L~~lvP~~~~~~~~~k~~Ka~IL~~ai~YI~~Lq~~~~   64 (65)
T 1an4_A            4 KRRAQHNEVERRRRDKINNWIVQLSKIIPDSSMESTKSGQSKGGILSKASDYIQELRQSNH   64 (65)
T ss_dssp             CCCCSSHHHHHHHHHHHHHHHHHHHHHSCCCCCCSSTTCCCTTTTTTTTHHHHHHHHTTTC
T ss_pred             HHHHhhchHHHHHHHHHHHHHHHHHHHCcCcccccccCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            346899999999999999999999999999862     35999999999999999998753

>4h10_A ARYL hydrocarbon receptor nuclear translocator-LI 1; BHLH, circadian transcription, transcription-DNA complex; 2.40A {Homo sapiens}

Probab=99.47  E-value=5.5e-15  Score=115.44  Aligned_cols=53  Identities=30%  Similarity=0.478  Sum_probs=48.1

Q ss_pred             CCcCCcchhhHHHHHHHHHHHHHHHhccCCCC----CcCCChhhHHHHHHHHHHHHHH
Q 019338          264 GQATNSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQQ  317 (342)
Q Consensus       264 ~~a~~~HslaERrRRekIner~~~Lq~LVP~~----~K~~dKAsIL~eaIdYIk~LQ~  317 (342)
                      .+++..|+++||+||++||+.|.+|+.|||.|    .| +|||+||+.||+||+.||.
T Consensus         7 ~~rR~~H~~~ERrRR~rIN~~l~eL~~LvP~~~~~~~K-ldKasIL~~tV~ylk~l~~   63 (73)
T 4h10_A            7 KNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRK-LDKLTVLRMAVQHMKTLRG   63 (73)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHTCSSC-CCHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHhcchHHHHHHHHHHHHHHHHHHHcccccccccc-ccHHHHHHHHHHHHHHHhc
Confidence            34568999999999999999999999999987    46 4999999999999999984

>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B

Probab=99.42  E-value=9.5e-14  Score=109.25  Aligned_cols=56  Identities=27%  Similarity=0.466  Sum_probs=50.7

Q ss_pred             CcchhhHHHHHHHHHHHHHHHhccCCCC--CcCCChhhHHHHHHHHHHHHHHHHHHHHH
Q 019338          268 NSHSLAERVRREKISERMRLLQELVPGC--NKITGKAVMLDEIINYVQSLQQQVEVCYF  324 (342)
Q Consensus       268 ~~HslaERrRRekIner~~~Lq~LVP~~--~K~~dKAsIL~eaIdYIk~LQ~qVq~l~~  324 (342)
                      ..|+..||+||++||+.|..|+++||.+  .| .+|++||..||+||+.||.+++.|..
T Consensus         4 ~~hn~~Er~RR~~in~~f~~Lr~lvP~~~~~k-~sK~~iL~~Ai~YI~~L~~~~~~l~~   61 (83)
T 1nkp_B            4 AHHNALERKRRDHIKDSFHSLRDSVPSLQGEK-ASRAQILDKATEYIQYMRRKNHTHQQ   61 (83)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTSGGGTTSC-CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHhhhHHHHHHHHHHHHHHHHHHHCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6899999999999999999999999975  56 59999999999999999999984443

>1hlo_A Protein (transcription factor MAX); transcriptional regulation, DNA binding, complex (transcription factor MAX/DNA), transcription/DNA complex; HET: DNA; 2.80A {Homo sapiens} SCOP: a.38.1.1

Probab=99.41  E-value=1.7e-13  Score=107.40  Aligned_cols=62  Identities=24%  Similarity=0.427  Sum_probs=54.8

Q ss_pred             CCcchhhHHHHHHHHHHHHHHHhccCCCC--CcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 019338          267 TNSHSLAERVRREKISERMRLLQELVPGC--NKITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHF  332 (342)
Q Consensus       267 ~~~HslaERrRRekIner~~~Lq~LVP~~--~K~~dKAsIL~eaIdYIk~LQ~qVq~l~~Ls~kl~~~  332 (342)
                      +..|+..||+||..||+.|..|+.|||.+  .| .+|+.||..||+||+.||.+++   .|..+++.+
T Consensus        13 R~~hn~~Er~RR~~in~~f~~Lr~lvP~~~~~k-~sK~~iL~~Ai~YI~~L~~~~~---~L~~e~~~L   76 (80)
T 1hlo_A           13 RAHHNALERKRRDHIKDSFHSLRDSVPSLQGEK-ASRAQILDKATEYIQYMRRKNH---THQQDIDDL   76 (80)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTSC-CCHHHHHHHHHHHHHHHHHHHH---HHHHHHHTH
T ss_pred             HHHhhHHHHHHHHHHHHHHHHHHHHCcCCCCCC-ccHHHHHHHHHHHHHHHHHHHH---HHHHHHHHH
Confidence            47999999999999999999999999987  46 5999999999999999999999   665555544

>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1

Probab=99.37  E-value=5.4e-13  Score=107.03  Aligned_cols=56  Identities=25%  Similarity=0.417  Sum_probs=50.6

Q ss_pred             CcchhhHHHHHHHHHHHHHHHhccCCCC---CcCCChhhHHHHHHHHHHHHHHHHHHHHH
Q 019338          268 NSHSLAERVRREKISERMRLLQELVPGC---NKITGKAVMLDEIINYVQSLQQQVEVCYF  324 (342)
Q Consensus       268 ~~HslaERrRRekIner~~~Lq~LVP~~---~K~~dKAsIL~eaIdYIk~LQ~qVq~l~~  324 (342)
                      ..|++.||+||+.||++|..|+++||.+   .| .+|++||..||+||++|+.+.+.|..
T Consensus         8 ~~Hn~~ER~RR~~ln~~f~~Lr~~vP~~~~~~K-~sK~~iL~~A~~YI~~L~~~~~~l~~   66 (88)
T 1nkp_A            8 RTHNVLERQRRNELKRSFFALRDQIPELENNEK-APKVVILKKATAYILSVQAEEQKLIS   66 (88)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCGGGTTCTT-CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6899999999999999999999999976   35 59999999999999999999884443

>3u5v_A Protein MAX, transcription factor E2-alpha chimer; basic helix-loop-helix (BHLH); 1.70A {Mus musculus} PDB: 2ql2_A*

Probab=99.26  E-value=2.4e-12  Score=101.13  Aligned_cols=54  Identities=30%  Similarity=0.423  Sum_probs=46.3

Q ss_pred             CCcchhhHHHHHHHHHHHHHHHhccCCCC---CcCCChhhHHHHHHHHHHHHHHHHH
Q 019338          267 TNSHSLAERVRREKISERMRLLQELVPGC---NKITGKAVMLDEIINYVQSLQQQVE  320 (342)
Q Consensus       267 ~~~HslaERrRRekIner~~~Lq~LVP~~---~K~~dKAsIL~eaIdYIk~LQ~qVq  320 (342)
                      +..|+..||+||+.||+.|..|+.+||.+   .|...|+.||..||+||++||++++
T Consensus         6 R~~hN~~ER~Rr~~IN~~f~~Lr~~vP~~~~~~K~~sK~~IL~~AieYI~~Lq~~l~   62 (76)
T 3u5v_A            6 RAHHNALERKRRRDINEAFRELGRMCQMHLKSDKAQTKLLILQQAVQVILGLEQQVR   62 (76)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhhchHHHhhhHHHHHHHHHHHHHHcCCCCCccccccHHHHHHHHHHHHHHHHHHHH
Confidence            47899999999999999999999999953   3433688999999999999999998

>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1

Probab=99.22  E-value=1.1e-11  Score=98.04  Aligned_cols=55  Identities=18%  Similarity=0.248  Sum_probs=49.4

Q ss_pred             CcchhhHHHHHHHHHHHHHHHhccCCCC---CcCCChhhHHHHHHHHHHHHHHHHHHHH
Q 019338          268 NSHSLAERVRREKISERMRLLQELVPGC---NKITGKAVMLDEIINYVQSLQQQVEVCY  323 (342)
Q Consensus       268 ~~HslaERrRRekIner~~~Lq~LVP~~---~K~~dKAsIL~eaIdYIk~LQ~qVq~l~  323 (342)
                      ..|+..||+||..|++.|..|+++||.+   .| ..|+.||..||+||+.||.+.+.|.
T Consensus         3 ~~HN~~ER~RR~~lk~~f~~Lr~~vP~~~~~~k-~sk~~iL~kA~~yI~~L~~~~~~l~   60 (80)
T 1nlw_A            3 STHNEMEKNRRAHLRLSLEKLKGLVPLGPDSSR-HTTLSLLTKAKLHIKKLEDSDRKAV   60 (80)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSSCCCSSSCC-CTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5799999999999999999999999965   45 4899999999999999999998433

>4f3l_A Mclock, circadian locomoter output cycles protein kaput; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}

Probab=98.90  E-value=1.1e-09  Score=103.94  Aligned_cols=53  Identities=21%  Similarity=0.440  Sum_probs=41.3

Q ss_pred             CcCCcchhhHHHHHHHHHHHHHHHhccCCC-CCcCCChhhHHHHHHHHHHHHHHH
Q 019338          265 QATNSHSLAERVRREKISERMRLLQELVPG-CNKITGKAVMLDEIINYVQSLQQQ  318 (342)
Q Consensus       265 ~a~~~HslaERrRRekIner~~~Lq~LVP~-~~K~~dKAsIL~eaIdYIk~LQ~q  318 (342)
                      .++.+|+++||+||++||+.|.+|+.|||. ..| +||++||..||+||+.|+..
T Consensus        11 ~~~~~~~~~e~~rr~~~n~~~~~l~~~~p~~~~~-~dk~~il~~~~~~~~~~~~~   64 (361)
T 4f3l_A           11 AKRVSRNKSEKKRRDQFNVLIKELGSMLPGNARK-MDKSTVLQKSIDFLRKHKET   64 (361)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHTCCSSSCC-CCHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHhCCCCCCC-cCHHHHHHHHHHHHHHHHhh
Confidence            345799999999999999999999999994 456 59999999999999999864

>1mdy_A Protein (MYOD BHLH domain); protein-DNA complex, transcription/DNA complex; HET: DNA; 2.80A {Mus musculus} SCOP: a.38.1.1 PDB: 1mdy_B*

Probab=98.86  E-value=2.1e-09  Score=82.86  Aligned_cols=53  Identities=25%  Similarity=0.376  Sum_probs=47.0

Q ss_pred             CcchhhHHHHHHHHHHHHHHHhccCCCC-CcCCChhhHHHHHHHHHHHHHHHHH
Q 019338          268 NSHSLAERVRREKISERMRLLQELVPGC-NKITGKAVMLDEIINYVQSLQQQVE  320 (342)
Q Consensus       268 ~~HslaERrRRekIner~~~Lq~LVP~~-~K~~dKAsIL~eaIdYIk~LQ~qVq  320 (342)
                      ..|+..||+|+..||+.|..|+.+||.. +++..|+.+|..||+||.+||..++
T Consensus        14 ~~aN~rER~R~~~iN~af~~LR~~iP~~~~~KlSKi~tLr~Ai~YI~~L~~~L~   67 (68)
T 1mdy_A           14 KAATMRERRRLSKVNEAFETLKRSTSSNPNQRLPKVEILRNAIRYIEGLQALLR   67 (68)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTSCSCTTSCCCHHHHHHHHHHHHHHHHHTTC
T ss_pred             hHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHc
Confidence            5799999999999999999999999964 3335999999999999999998653

>2ql2_B Neurod1, neurogenic differentiation factor 1; basic-helix-loop-helix; HET: DNA; 2.50A {Mus musculus}

Probab=98.80  E-value=6.1e-09  Score=78.33  Aligned_cols=53  Identities=21%  Similarity=0.256  Sum_probs=47.0

Q ss_pred             CcchhhHHHHHHHHHHHHHHHhccCCCC--CcCCChhhHHHHHHHHHHHHHHHHH
Q 019338          268 NSHSLAERVRREKISERMRLLQELVPGC--NKITGKAVMLDEIINYVQSLQQQVE  320 (342)
Q Consensus       268 ~~HslaERrRRekIner~~~Lq~LVP~~--~K~~dKAsIL~eaIdYIk~LQ~qVq  320 (342)
                      ..|+..||+|+..||+.|..|+.+||..  +++..|..+|..||+||..||..++
T Consensus         4 ~~~N~rER~R~~~iN~af~~LR~~lP~~~~~~klSKi~tLr~Ai~YI~~L~~~L~   58 (60)
T 2ql2_B            4 MKANARERNRMHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILR   58 (60)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTSSSCCSSSCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHccCCCCcCcCCHHHHHHHHHHHHHHHHHHHh
Confidence            4688999999999999999999999964  3345999999999999999998764

>4f3l_B BMAL1B; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}

Probab=98.79  E-value=1.8e-09  Score=103.98  Aligned_cols=53  Identities=28%  Similarity=0.423  Sum_probs=47.6

Q ss_pred             CcCCcchhhHHHHHHHHHHHHHHHhccCC----CCCcCCChhhHHHHHHHHHHHHHHH
Q 019338          265 QATNSHSLAERVRREKISERMRLLQELVP----GCNKITGKAVMLDEIINYVQSLQQQ  318 (342)
Q Consensus       265 ~a~~~HslaERrRRekIner~~~Lq~LVP----~~~K~~dKAsIL~eaIdYIk~LQ~q  318 (342)
                      +++.+|+.+||+||++||+.|.+|+.|||    ...|+ ||++||..||+||+.|+..
T Consensus        12 ~~~~~~~~~ek~rR~~~n~~~~~L~~l~p~~~~~~~k~-dk~~il~~~~~~l~~~~~~   68 (387)
T 4f3l_B           12 NAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKL-DKLTVLRMAVQHMKTLRGA   68 (387)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCSSCC-CHHHHHHHHHHHHHHHHCC
T ss_pred             hhcccccchhhcchHHHHHHHHHHHHhcCCCCcccccc-CHHHHHHHHHHHHHHhhcc
Confidence            34589999999999999999999999999    45675 9999999999999999853

>4ath_A MITF, microphthalmia-associated transcription factor; DNA binding protein, melanoma; HET: MSE; 1.95A {Mus musculus}

Probab=98.66  E-value=4.6e-08  Score=78.38  Aligned_cols=51  Identities=24%  Similarity=0.389  Sum_probs=43.0

Q ss_pred             HHHHHHHHHHHHhccCCCCCc---CCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 019338          277 RREKISERMRLLQELVPGCNK---ITGKAVMLDEIINYVQSLQQQVEVCYFMAV  327 (342)
Q Consensus       277 RRekIner~~~Lq~LVP~~~K---~~dKAsIL~eaIdYIk~LQ~qVq~l~~Ls~  327 (342)
                      -|..||++|++|..|||.+..   ..+|++||..+|+||++||++++-|..+..
T Consensus         3 ~R~nIN~~I~EL~~LiP~~~~~~~k~nKg~IL~ksvdYI~~Lq~e~~r~~e~e~   56 (83)
T 4ath_A            3 MRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKDLEN   56 (83)
T ss_dssp             CHHHHHHHHHHHHHHSCCCCCTTCCCSHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             chhhHHHhhhhhhccCCCCCCcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            489999999999999998643   249999999999999999998885555544

>2lfh_A DNA-binding protein inhibitor ID-3; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.31  E-value=2.5e-07  Score=71.70  Aligned_cols=44  Identities=25%  Similarity=0.412  Sum_probs=39.3

Q ss_pred             HHHHHHHHHHHHHHHhccCCCC--CcCCChhhHHHHHHHHHHHHHH
Q 019338          274 ERVRREKISERMRLLQELVPGC--NKITGKAVMLDEIINYVQSLQQ  317 (342)
Q Consensus       274 ERrRRekIner~~~Lq~LVP~~--~K~~dKAsIL~eaIdYIk~LQ~  317 (342)
                      ||+|+..||+.|..||.+||..  +++..|..+|..||+||..||.
T Consensus        22 ER~Rm~~lN~aF~~LR~~VP~~p~~kKLSKiEtLr~Ai~YI~~Lq~   67 (68)
T 2lfh_A           22 PLSLLDDMNHCYSRLRELVPGVPRGTQLSQVEILQRVIDYILDLQV   67 (68)
T ss_dssp             CSCSSSHHHHHHHHHHHHCCCCCTTCCCCHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCccHHHHHHHHHHHHHHHHc
Confidence            8999999999999999999965  3335999999999999999984

>4aya_A DNA-binding protein inhibitor ID-2; cell cycle; 2.10A {Homo sapiens}

Probab=97.60  E-value=0.0001  Score=60.55  Aligned_cols=47  Identities=28%  Similarity=0.407  Sum_probs=40.9

Q ss_pred             HHHHHHHHHHHHHHHhccCCCC--CcCCChhhHHHHHHHHHHHHHHHHH
Q 019338          274 ERVRREKISERMRLLQELVPGC--NKITGKAVMLDEIINYVQSLQQQVE  320 (342)
Q Consensus       274 ERrRRekIner~~~Lq~LVP~~--~K~~dKAsIL~eaIdYIk~LQ~qVq  320 (342)
                      ||.|=..||+-|..||.+||..  +++..|..+|.-||+||..||..++
T Consensus        33 ~r~Rm~~lN~AF~~LR~~vP~~p~~kKLSKIETLRlAi~YI~~Lq~~L~   81 (97)
T 4aya_A           33 PMSLLYNMNDCYSKLKELVPSIPQNKKVSKMEILQHVIDYILDLQIALD   81 (97)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTSCSSSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCcccHHHHHHHHHHHHHHHHHHHh
Confidence            4677788999999999999964  3445899999999999999999887

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	342
d1am9a_	80	a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxI	5e-14
d1uklc_	61	a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId	9e-14
d1mdya_	68	a.38.1.1 (A:) Myod B/HLH domain {Mouse (Mus muscul	4e-13
d1nkpa_	88	a.38.1.1 (A:) Myc proto-oncogene protein {Human (H	7e-13
d1a0aa_	63	a.38.1.1 (A:) Pho4 B/HLH domain {Baker's yeast (Sa	9e-13
d1an4a_	65	a.38.1.1 (A:) Usf B/HLH domain {Human (Homo sapien	4e-11
d1nkpb_	83	a.38.1.1 (B:) Max protein {Human (Homo sapiens) [T	2e-10
d1nlwa_	79	a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [T	6e-10

>d1am9a_ a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxId: 9606]} Length = 80

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: SREBP-1a
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.2 bits (156), Expect = 5e-14
 Identities = 16/59 (27%), Positives = 33/59 (55%)

Query: 262 KRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
            RG+   +H+  E+  R  I++++  L++LV G      K+ +L + I+Y++ LQ   +
Sbjct: 2   SRGEKRTAHNAIEKRYRSSINDKIIELKDLVVGTEAKLNKSAVLRKAIDYIRFLQHSNQ 60

>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 61

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: SREBP-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.2 bits (154), Expect = 9e-14
 Identities = 13/43 (30%), Positives = 26/43 (60%)

Query: 278 REKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 320
           R  I++++  L++LV G +    K+ +L + I+Y++ LQQ   
Sbjct: 1   RSSINDKIIELKDLVMGTDAKMHKSGVLRKAIDYIKYLQQVNH 43

>d1mdya_ a.38.1.1 (A:) Myod B/HLH domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 68

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: Myod B/HLH domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 61.8 bits (150), Expect = 4e-13
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 5/67 (7%)

Query: 259 MRAKRGQAT----NSHSLAERVRREKISERMRLLQELVPGC-NKITGKAVMLDEIINYVQ 313
           M  KR         + ++ ER R  K++E    L+       N+   K  +L   I Y++
Sbjct: 1   MELKRKTTNADRRKAATMRERRRLSKVNEAFETLKRSTSSNPNQRLPKVEILRNAIRYIE 60

Query: 314 SLQQQVE 320
            LQ  + 
Sbjct: 61  GLQALLR 67

>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]} Length = 88

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: Myc proto-oncogene protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.5 bits (149), Expect = 7e-13
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 6/65 (9%)

Query: 258 HMRAKRGQATNSHSLAERVRREKISERMRLLQELVPGC--NKITGKAVMLDEIINYVQSL 315
           HM  KR     +H++ ER RR ++      L++ +P    N+   K V+L +   Y+ S+
Sbjct: 2   HMNVKR----RTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSV 57

Query: 316 QQQVE 320
           Q + +
Sbjct: 58  QAEEQ 62

>d1a0aa_ a.38.1.1 (A:) Pho4 B/HLH domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 63

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: Pho4 B/HLH domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 60.3 bits (146), Expect = 9e-13
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 6/58 (10%)

Query: 269 SHSLAERVRREKISERMRLLQELVPGCNKITG------KAVMLDEIINYVQSLQQQVE 320
           SH  AE+ RR +++  +  L  L+P   K         KA  ++    Y++ LQQ   
Sbjct: 5   SHKHAEQARRNRLAVALHELASLIPAEWKQQNVSAAPSKATTVEAACRYIRHLQQNGS 62

>d1an4a_ a.38.1.1 (A:) Usf B/HLH domain {Human (Homo sapiens) [TaxId: 9606]} Length = 65

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: Usf B/HLH domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.9 bits (135), Expect = 4e-11
 Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 5/58 (8%)

Query: 268 NSHSLAERVRREKISERMRLLQELVPGCNKITG-----KAVMLDEIINYVQSLQQQVE 320
             H+  ER RR+KI+  +  L +++P  +  +      K  +L +  +Y+Q L+Q   
Sbjct: 7   AQHNEVERRRRDKINNWIVQLSKIIPDSSMESTKSGQSKGGILSKASDYIQELRQSNH 64

>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]} Length = 83

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: Max protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.5 bits (131), Expect = 2e-10
 Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 269 SHSLAERVRREKISERMRLLQELVPGC-NKITGKAVMLDEIINYVQSLQQQVE 320
            H+  ER RR+ I +    L++ VP    +   +A +LD+   Y+Q ++++  
Sbjct: 5   HHNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNH 57

>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]} Length = 79

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: Mad protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.0 bits (127), Expect = 6e-10
 Identities = 10/54 (18%), Positives = 22/54 (40%), Gaps = 2/54 (3%)

Query: 269 SHSLAERVRREKISERMRLLQELVPGCNKI--TGKAVMLDEIINYVQSLQQQVE 320
           +H+  E+ RR  +   +  L+ LVP            +L +   +++ L+    
Sbjct: 4   THNEMEKNRRAHLRLSLEKLKGLVPLGPDSSRHTTLSLLTKAKLHIKKLEDSDR 57

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	342
d1am9a_	80	SREBP-1a {Human (Homo sapiens) [TaxId: 9606]}	99.53
d1a0aa_	63	Pho4 B/HLH domain {Baker's yeast (Saccharomyces ce	99.44
d1nlwa_	79	Mad protein {Human (Homo sapiens) [TaxId: 9606]}	99.44
d1mdya_	68	Myod B/HLH domain {Mouse (Mus musculus) [TaxId: 10	99.43
d1uklc_	61	SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}	99.39
d1nkpa_	88	Myc proto-oncogene protein {Human (Homo sapiens) [	99.38
d1nkpb_	83	Max protein {Human (Homo sapiens) [TaxId: 9606]}	99.38
d1an4a_	65	Usf B/HLH domain {Human (Homo sapiens) [TaxId: 960	99.33

>d1am9a_ a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: SREBP-1a
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=1.4e-15  Score=117.47  Aligned_cols=65  Identities=22%  Similarity=0.340  Sum_probs=57.2

Q ss_pred             CCcchhhHHHHHHHHHHHHHHHhccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 019338          267 TNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFNL  334 (342)
Q Consensus       267 ~~~HslaERrRRekIner~~~Lq~LVP~~~K~~dKAsIL~eaIdYIk~LQ~qVq~l~~Ls~kl~~~n~  334 (342)
                      +..|+.+||+||++||+.|..|++|||++..+++|++||..||+||+.|+.+++   .|..+...+..
T Consensus         7 R~~H~~~Er~RR~~in~~~~~L~~llP~~~~k~~K~~iL~~a~~yI~~L~~~~~---~L~~e~~~lk~   71 (80)
T d1am9a_           7 RTAHNAIEKRYRSSINDKIIELKDLVVGTEAKLNKSAVLRKAIDYIRFLQHSNQ---KLKQENLSLRT   71 (80)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence            468999999999999999999999999987667999999999999999999999   66665555443

>d1a0aa_ a.38.1.1 (A:) Pho4 B/HLH domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: Pho4 B/HLH domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.44  E-value=3e-14  Score=105.60  Aligned_cols=53  Identities=28%  Similarity=0.460  Sum_probs=47.2

Q ss_pred             CCcchhhHHHHHHHHHHHHHHHhccCCCC------CcCCChhhHHHHHHHHHHHHHHHH
Q 019338          267 TNSHSLAERVRREKISERMRLLQELVPGC------NKITGKAVMLDEIINYVQSLQQQV  319 (342)
Q Consensus       267 ~~~HslaERrRRekIner~~~Lq~LVP~~------~K~~dKAsIL~eaIdYIk~LQ~qV  319 (342)
                      +..|+++||+||++||+.|..|+.|||++      ..+.+|+.||+.||+||++||++|
T Consensus         3 R~~H~~~Er~RR~~in~~~~~L~~llP~~~~~~~~~~k~sKa~iL~~Av~yI~~Lq~~v   61 (63)
T d1a0aa_           3 RESHKHAEQARRNRLAVALHELASLIPAEWKQQNVSAAPSKATTVEAACRYIRHLQQNG   61 (63)
T ss_dssp             TTGGGGGTHHHHHHHHHHHHHHHHTSCHHHHTSSCCCCSCTTHHHHHHHHHHHHHHTCS
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHCCCcccccCCcccccHHHHHHHHHHHHHHHHHhh
Confidence            36899999999999999999999999953      233599999999999999999876

>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: Mad protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=5e-14  Score=107.92  Aligned_cols=65  Identities=15%  Similarity=0.171  Sum_probs=54.8

Q ss_pred             CcchhhHHHHHHHHHHHHHHHhccCCCCC--cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 019338          268 NSHSLAERVRREKISERMRLLQELVPGCN--KITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFNLQ  335 (342)
Q Consensus       268 ~~HslaERrRRekIner~~~Lq~LVP~~~--K~~dKAsIL~eaIdYIk~LQ~qVq~l~~Ls~kl~~~n~~  335 (342)
                      ..|+..||+||++||+.|..|++|||.+.  .+.+|++||..||+||+.|+.+++   .|..+...+...
T Consensus         3 ~~Hn~~Er~RR~~in~~f~~L~~llP~~~~~~k~sK~~iL~~A~~yI~~L~~~~~---~l~~~~~~L~~~   69 (79)
T d1nlwa_           3 STHNEMEKNRRAHLRLSLEKLKGLVPLGPDSSRHTTLSLLTKAKLHIKKLEDSDR---KAVHQIDQLQRE   69 (79)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSSCCCSSSCCCTTHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCccCCCCCCCCHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Confidence            57999999999999999999999999763  225999999999999999999999   555555544433

>d1mdya_ a.38.1.1 (A:) Myod B/HLH domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: Myod B/HLH domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.43  E-value=1.8e-14  Score=108.66  Aligned_cols=53  Identities=23%  Similarity=0.347  Sum_probs=48.4

Q ss_pred             CcchhhHHHHHHHHHHHHHHHhccCCCCC-cCCChhhHHHHHHHHHHHHHHHHH
Q 019338          268 NSHSLAERVRREKISERMRLLQELVPGCN-KITGKAVMLDEIINYVQSLQQQVE  320 (342)
Q Consensus       268 ~~HslaERrRRekIner~~~Lq~LVP~~~-K~~dKAsIL~eaIdYIk~LQ~qVq  320 (342)
                      ..|++.||+||++||+.|..|+.|||.+. +..+|+.||+.||+||++||++|+
T Consensus        14 ~~hn~~Er~Rr~~in~~~~~L~~llP~~~~~k~sK~~iL~~Ai~YI~~Lq~~l~   67 (68)
T d1mdya_          14 KAATMRERRRLSKVNEAFETLKRSTSSNPNQRLPKVEILRNAIRYIEGLQALLR   67 (68)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTSCSCTTSCCCHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            57999999999999999999999999874 335999999999999999998875

>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: SREBP-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=5.8e-14  Score=103.64  Aligned_cols=55  Identities=25%  Similarity=0.347  Sum_probs=47.9

Q ss_pred             HHHHHHHHHHHhccCCCCCcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 019338          278 REKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFNLQ  335 (342)
Q Consensus       278 RekIner~~~Lq~LVP~~~K~~dKAsIL~eaIdYIk~LQ~qVq~l~~Ls~kl~~~n~~  335 (342)
                      |++||++|..|++|||++.++++|++||.+||+||++||.+++   .|.++...+...
T Consensus         1 R~~in~~f~~L~~lvP~~~~K~~Ka~iL~~Ai~YI~~Lq~~~~---~L~~e~~~L~~~   55 (61)
T d1uklc_           1 RSSINDKIIELKDLVMGTDAKMHKSGVLRKAIDYIKYLQQVNH---KLRQENMVLKLA   55 (61)
T ss_dssp             CCCHHHHHHHHHHHHSCSSCCCCTTTHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Confidence            6789999999999999987557999999999999999999999   666666655543

>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: Myc proto-oncogene protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.7e-13  Score=106.86  Aligned_cols=63  Identities=21%  Similarity=0.356  Sum_probs=53.5

Q ss_pred             CcchhhHHHHHHHHHHHHHHHhccCCCCC--cCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 019338          268 NSHSLAERVRREKISERMRLLQELVPGCN--KITGKAVMLDEIINYVQSLQQQVEVCYFMAVKWRHFN  333 (342)
Q Consensus       268 ~~HslaERrRRekIner~~~Lq~LVP~~~--K~~dKAsIL~eaIdYIk~LQ~qVq~l~~Ls~kl~~~n  333 (342)
                      ..|+.+||+||++||+.|..|++|||++.  ...+|+.||..||+||++|+.+++   .|..+...+.
T Consensus         8 ~~Hn~~Er~RR~~in~~f~~Lr~llP~~~~~~k~sK~~iL~~A~~yI~~L~~~~~---~l~~~~~~l~   72 (88)
T d1nkpa_           8 RTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAEEQ---KLISEEDLLR   72 (88)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCGGGTTCTTCCHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCccCHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
Confidence            68999999999999999999999999752  225999999999999999999998   5555544443

>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: Max protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.3e-13  Score=106.54  Aligned_cols=57  Identities=25%  Similarity=0.432  Sum_probs=50.2

Q ss_pred             CcchhhHHHHHHHHHHHHHHHhccCCCC-CcCCChhhHHHHHHHHHHHHHHHHHHHHH
Q 019338          268 NSHSLAERVRREKISERMRLLQELVPGC-NKITGKAVMLDEIINYVQSLQQQVEVCYF  324 (342)
Q Consensus       268 ~~HslaERrRRekIner~~~Lq~LVP~~-~K~~dKAsIL~eaIdYIk~LQ~qVq~l~~  324 (342)
                      ..|+.+||+||++||+.|..|++|||++ .+.++|++||..||+||+.|+.+++.|..
T Consensus         4 ~~Hn~~Er~RR~~in~~f~~L~~llP~~~~~k~sK~~iL~~A~~yI~~L~~~~~~l~~   61 (83)
T d1nkpb_           4 AHHNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNHTHQQ   61 (83)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTSGGGTTSCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5899999999999999999999999975 23359999999999999999999884433

>d1an4a_ a.38.1.1 (A:) Usf B/HLH domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: HLH-like
superfamily: HLH, helix-loop-helix DNA-binding domain
family: HLH, helix-loop-helix DNA-binding domain
domain: Usf B/HLH domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=2.2e-13  Score=101.45  Aligned_cols=52  Identities=29%  Similarity=0.489  Sum_probs=47.0

Q ss_pred             CCcchhhHHHHHHHHHHHHHHHhccCCCCC------cCCChhhHHHHHHHHHHHHHHHH
Q 019338          267 TNSHSLAERVRREKISERMRLLQELVPGCN------KITGKAVMLDEIINYVQSLQQQV  319 (342)
Q Consensus       267 ~~~HslaERrRRekIner~~~Lq~LVP~~~------K~~dKAsIL~eaIdYIk~LQ~qV  319 (342)
                      +..|+.+||+||++||+.|..|++|||.+.      + .+|+.||..||+||+.||++.
T Consensus         6 R~~H~~~Er~RR~~in~~f~~L~~lvP~~~~~~~~~k-~sK~~iL~~av~yI~~Lq~~~   63 (65)
T d1an4a_           6 RAQHNEVERRRRDKINNWIVQLSKIIPDSSMESTKSG-QSKGGILSKASDYIQELRQSN   63 (65)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHSCCCCCCSSTTC-CCTTTTTTTTHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCCCC-CCHHHHHHHHHHHHHHHHHhh
Confidence            468999999999999999999999999763      5 489999999999999999753