Citrus Sinensis ID: 019344

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340--
Protein Sequence
MNWNAPINSWWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLNPMPDLENRISDLQYQILDNENVASTNEPSDS
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHEEccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mnwnapinswwRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIAdlgvdapvtQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNflvnkayqfssitsvtlLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLlsdaggdggggsrpllGDVLVIAGTIFFatsnvgeeffvkkkdRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYsttekdlnpmpdlenrISDLQYQildnenvastnepsds
Flexible Loop (DISEMBL)
mnwnapinswwRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFatsnvgeeffvkkkdrVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLNPMPDLENRISDLQYQILdnenvastnepsds
Low Complexity Region (SEG)
MNWNAPINSWWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQllgaalcvlglglvllsdaggdggggsrpllgdvLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLNPMPDLENRISDLQYQILDNENVASTNEPSDS
Disordered region (IsUnstruct)
***NAPINSWWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEK**************LQYQI***************
Disordered Region (DISOPRED)
********SWWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYS**************************************
Disordered Region (DISEMBL)
MNWNAPINSWWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLNPMPDLENRISDLQYQILDNENV*********
Disordered Region (DISPRO)
MNWNAPINSWWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTT************************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNWNAPINSWWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLNPMPDLENRISDLQYQILDNENVASTNEPSDS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	342	2.2.26 [Sep-21-2011]
Q5T1Q4	408	Solute carrier family 35	yes	no	0.921	0.772	0.366	2e-52
Q8BGK5	408	Solute carrier family 35	yes	no	0.921	0.772	0.372	4e-52
Q7TML3	375	Solute carrier family 35	no	no	0.888	0.810	0.354	1e-48
Q8IXU6	374	Solute carrier family 35	no	no	0.906	0.828	0.346	4e-48
Q0V9U2	391	Solute carrier family 35	no	no	0.871	0.762	0.337	1e-44
O59785	505	Uncharacterized solute ca	yes	no	0.845	0.572	0.310	8e-36

>sp|Q5T1Q4|S35F1_HUMAN Solute carrier family 35 member F1 OS=Homo sapiens GN=SLC35F1 PE=2 SV=2

 Score =  206 bits (524), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/325 (36%), Positives = 185/325 (56%), Gaps = 10/325 (3%)

Query: 25  LGQLVSFTLALMSFTSSLIA-DLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR------L 77
           LGQ++S  +  +  TS  ++ D   + PV QS   Y  L LVY   L  R+        L
Sbjct: 66  LGQVLSLLICGIGLTSKYLSEDFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLAIL 125

Query: 78  RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQ 137
           R  W+ Y++LG +D++ N+LV KAYQ++++TS+ LLDC  I   I+L+W FL  RY    
Sbjct: 126 RRRWWKYMILGLIDLEANYLVVKAYQYTTLTSIQLLDCFVIPVVILLSWFFLLIRYKAVH 185

Query: 138 LLGAALCVLGLGLVLLSDA--GGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKD 195
            +G  +C+LG+G ++ +D   G   G G   L+GD+LV+ G   +  SNV EE+ ++   
Sbjct: 186 FIGIVVCILGMGCMVGADVLVGRHQGAGENKLVGDLLVLGGATLYGISNVWEEYIIRTLS 245

Query: 196 RVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLK 255
           RVE + MIG++G   S +QL+I+E K L  V W   I L + G++A  F  Y+  P V+K
Sbjct: 246 RVEFLGMIGLFGAFFSGIQLAIMEHKELLKVPWDWQIGLLYVGFSACMFGLYSFMPVVIK 305

Query: 256 LSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLNPMPD 315
            + AT  NLSLLTAD++++   +  +H K   LY L+F  ++IGL++YS+T   +   P 
Sbjct: 306 KTSATSVNLSLLTADLYSLFCGLFLFHYKFSGLYLLSFFTILIGLVLYSSTSTYIAQDPR 365

Query: 316 LENRISDLQYQILDNENVASTNEPS 340
           +  +  +    ++D    A   EPS
Sbjct: 366 VYKQFRNPSGPVVDLPTTAQV-EPS 389

Putative solute transporter.
Homo sapiens (taxid: 9606)

>sp|Q8BGK5|S35F1_MOUSE Solute carrier family 35 member F1 OS=Mus musculus GN=Slc35f1 PE=2 SV=1

 Score =  205 bits (521), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 121/325 (37%), Positives = 185/325 (56%), Gaps = 10/325 (3%)

Query: 25  LGQLVSFTLALMSFTSSLIA-DLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR------L 77
           LGQ++S  +  +  TS  +A D   + PV QS   Y  L LVY   L  R+        L
Sbjct: 66  LGQVLSLLVCGIGLTSKYLAEDFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLAIL 125

Query: 78  RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQ 137
           R  W+ Y++LG +D++ N+LV KAYQ++++TSV LLDC  I   I+L+W FL  RY    
Sbjct: 126 RRRWWKYMILGLIDLEANYLVVKAYQYTTLTSVQLLDCFVIPVVILLSWFFLLIRYKAVH 185

Query: 138 LLGAALCVLGLGLVLLSDA--GGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKD 195
            +G  +C+LG+G ++ +D   G   G G   L+GD+LV+ G   +  SNV EE  ++   
Sbjct: 186 FIGIVVCILGMGCMVGADVLVGRHQGAGENKLVGDLLVLGGATLYGISNVWEESIIRTLS 245

Query: 196 RVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLK 255
           RVE + MIG++G   S +QL+I+E K L  V W   I L + G++A  F  Y+  P V+K
Sbjct: 246 RVEFLGMIGLFGAFFSGIQLAIMEHKELLKVPWDWQIGLLYVGFSACMFGLYSFMPVVIK 305

Query: 256 LSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLNPMPD 315
            + AT  NLSLLTAD++++   +  +H K   LY L+F  ++IGL++YS+T   +   P 
Sbjct: 306 KTSATSVNLSLLTADLYSLFCGLFLFHYKFSGLYLLSFFTILIGLVLYSSTSTYIAQDPR 365

Query: 316 LENRISDLQYQILDNENVASTNEPS 340
           +  +  +    ++D  + A   EPS
Sbjct: 366 VYKQFRNPSGPVVDLPSTAQV-EPS 389

Putative solute transporter.

Mus musculus (taxid: 10090)

>sp|Q7TML3|S35F2_MOUSE Solute carrier family 35 member F2 OS=Mus musculus GN=Slc35f2 PE=2 SV=2

 Score =  193 bits (491), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 111/313 (35%), Positives = 180/313 (57%), Gaps = 9/313 (2%)

Query: 12  RSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIAD-LGVDAPVTQSAFAYFSLALVYGGVL 70
           R   T   L  + LGQ++S  +   + TS  +A+   V+ P+ QS   Y  L LVY  +L
Sbjct: 32  RKLFTWDILKTIALGQMLSLCICGTAITSQYLAEKYRVNTPMLQSFINYCLLFLVYTLML 91

Query: 71  LYRR------QRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVL 124
            ++       + LR  W+ Y LLG  DV+ N+L+ +AYQ++++TSV LLDC  I   + L
Sbjct: 92  AFQSGSDNLLEILRRKWWKYTLLGLADVEANYLIVRAYQYTTLTSVQLLDCFGIPVLMAL 151

Query: 125 TWLFLGTRYSLWQLLGAALCVLGLGLVLLSD--AGGDGGGGSRPLLGDVLVIAGTIFFAT 182
           +W  L  RY +   +   +C+LG+G ++ +D  AG +   GS  L+GD+LV+ G   +A 
Sbjct: 152 SWFILRARYKVIHFIAVFVCLLGVGTMVGADILAGREDNSGSDVLIGDILVLLGASLYAV 211

Query: 183 SNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAAS 242
           SNV EE+ VKK  R E + M+G++G ++S +QL I+E K +  ++W   I L F  +A  
Sbjct: 212 SNVCEEYIVKKLSRQEFLGMVGLFGTIISGIQLLIVEYKDIARIQWDWKIALLFVAFALC 271

Query: 243 SFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLII 302
            F  Y+  P V+K++ AT  NL +LTAD++++ F +  +  K   LY L+F ++++G I+
Sbjct: 272 MFCLYSFMPLVIKVTSATSVNLGILTADLYSLFFGLFLFEYKFSGLYILSFTVIMVGFIL 331

Query: 303 YSTTEKDLNPMPD 315
           Y +T       P+
Sbjct: 332 YCSTPTRTVEPPE 344

Putative solute transporter.

Mus musculus (taxid: 10090)

>sp|Q8IXU6|S35F2_HUMAN Solute carrier family 35 member F2 OS=Homo sapiens GN=SLC35F2 PE=1 SV=1

 Score =  192 bits (487), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 114/329 (34%), Positives = 188/329 (57%), Gaps = 19/329 (5%)

Query: 25  LGQLVSFTLALMSFTSSLIAD-LGVDAPVTQSAFAYFSLALVYGGVLLYRRQR------L 77
           LGQ++S  +   + TS  +A+   V+ P+ QS   Y  L L+Y  +L +R         L
Sbjct: 45  LGQMLSLCICGTAITSQYLAERYKVNTPMLQSFINYCLLFLIYTVMLAFRSGSDNLLVIL 104

Query: 78  RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQ 137
           +  W+ Y+LLG  DV+ N+++ +AYQ++++TSV LLDC  I   + L+W  L  RY +  
Sbjct: 105 KRKWWKYILLGLADVEANYVIVRAYQYTTLTSVQLLDCFGIPVLMALSWFILHARYRVIH 164

Query: 138 LLGAALCVLGLGLVLLSD--AGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKD 195
            +  A+C+LG+G ++ +D  AG +   GS  L+GD+LV+ G   +A SNV EE+ VKK  
Sbjct: 165 FIAVAVCLLGVGTMVGADILAGREDNSGSDVLIGDILVLLGASLYAISNVCEEYIVKKLS 224

Query: 196 RVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLK 255
           R E + M+G++G ++S +QL I+E K + S+ W   I L F  +A   F  Y+  P V+K
Sbjct: 225 RQEFLGMVGLFGTIISGIQLLIVEYKDIASIHWDWKIALLFVAFALCMFCLYSFMPLVIK 284

Query: 256 LSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIY-STTEKDLNPMP 314
           ++ AT  NL +LTAD++++   +  +  K   LY L+F ++++G I+Y ST  +   P  
Sbjct: 285 VTSATSVNLGILTADLYSLFVGLFLFGYKFSGLYILSFTVIMVGFILYCSTPTRTAEPA- 343

Query: 315 DLENRISDLQYQILDN------ENVASTN 337
             E+ +  +    +DN      EN+  T+
Sbjct: 344 --ESSVPPVTSIGIDNLGLKLEENLQETH 370

Putative solute transporter.

Homo sapiens (taxid: 9606)

>sp|Q0V9U2|S35F2_XENTR Solute carrier family 35 member F2 OS=Xenopus tropicalis GN=slc35f2 PE=2 SV=2

 Score =  180 bits (456), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/311 (33%), Positives = 170/311 (54%), Gaps = 13/311 (4%)

Query: 25  LGQLVSFTLALMSFTSSLIA-DLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR------L 77
           LGQ++S  +  +  TS  ++ D   + P+ QS   Y  L LVY   L  R+        L
Sbjct: 45  LGQVLSLLICGIRLTSKYLSEDFHANTPLFQSFLNYILLFLVYTTTLAVRQGEENLLAIL 104

Query: 78  RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQ 137
           +  W+ Y+ LG +D++  +LV KA+Q+++  S+ LL+C  I   I+L+W FL  RY +  
Sbjct: 105 KRRWWKYMFLGIIDIEATYLVVKAHQYTTFISIQLLNCFVIPVVILLSWFFLLVRYKVLH 164

Query: 138 LLGAALCVLGLGLVLLSDA------GGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFV 191
            +GA  C+LG+G +  +D        GD   G   L+GDVLV+ G   +  S+V +E+ V
Sbjct: 165 FIGAIACILGIGCMAGADVLMGRQQKGDFYPGDSKLIGDVLVLGGATLYGISSVCQEYIV 224

Query: 192 KKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAP 251
           +   RVE++ MIG++G   S +QL+I+E K L  V W   I L + G+ A  F  Y+  P
Sbjct: 225 RNLSRVELLGMIGLFGSFFSGIQLAIMEHKELLKVPWDWQIGLLYVGFTACMFGLYSFMP 284

Query: 252 FVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLN 311
            V+K + AT  NLS+LTA+++     +  +H K   LY L+F  +++GL+ Y +T   + 
Sbjct: 285 VVIKKTSATAINLSMLTAELYTFFCGLFLFHYKFSGLYLLSFFTILLGLVFYFSTNTYVA 344

Query: 312 PMPDLENRISD 322
             P +  +  +
Sbjct: 345 QDPRVYKQFRN 355

Putative solute transporter.

Xenopus tropicalis (taxid: 8364)

>sp|O59785|YCN8_SCHPO Uncharacterized solute carrier family 35 member C320.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC320.08 PE=1 SV=1

 Score =  151 bits (381), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 161/303 (53%), Gaps = 14/303 (4%)

Query: 22  LLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYR-------R 74
           + FLGQ++S  +   +  +  ++ +  + P  Q+   Y  L LVY    ++R        
Sbjct: 144 VFFLGQVLSLCITATNTFNGYMSGIS-NIPAFQTFLVYALLTLVYTPYTVFRMGFKKYFE 202

Query: 75  QRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYS 134
              R  W  Y++  F DV+GN+ V  AYQ++++ S +LLD       ++L+++FL  RY 
Sbjct: 203 MIFRHGWK-YIIFAFFDVEGNYFVVLAYQYTNMLSASLLDSWATVAVVILSFIFLKVRYH 261

Query: 135 LWQLLGAALCVLGLGLVLLSDAGGDGG-GGSRPLLGDVLVIAGTIFFATSNVGEEFFVKK 193
             Q+LG   C+ GL L+++SD    G      P LGD  +I G   +  SN  EE+F  K
Sbjct: 262 WSQILGVVACIGGLVLLVVSDVISRGDYSAVNPGLGDGYMIIGATCYGVSNTLEEYFASK 321

Query: 194 KDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFV 253
                V+  + +YG ++S +Q  I +   L ++ W++ +    AG+    F+ Y+LAP +
Sbjct: 322 LPLYVVIGQLSLYGSIISIIQTFIFDRHHLYTLHWTSEMGGYLAGFILVMFLLYSLAPIL 381

Query: 254 LKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIY----STTEKD 309
            ++S AT +N+SLLT+D W++V  I  +   V WLY +AF ++++GL +Y      T + 
Sbjct: 382 FRMSSATFYNISLLTSDFWSLVIGIHVFGYHVYWLYPIAFVLIILGLFVYHVFVDATRES 441

Query: 310 LNP 312
           + P
Sbjct: 442 IKP 444

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	342
297740093	337	unnamed protein product [Vitis vinifera]	0.982	0.997	0.727	1e-140
359481996	352	PREDICTED: solute carrier family 35 memb	0.982	0.954	0.719	1e-139
297740094	337	unnamed protein product [Vitis vinifera]	0.967	0.982	0.692	1e-129
359481998	673	PREDICTED: solute carrier family 35 memb	0.976	0.496	0.686	1e-129
255575633	340	conserved hypothetical protein [Ricinus	0.967	0.973	0.734	1e-124
357511003	363	Solute carrier family 35 member F1 [Medi	0.997	0.939	0.670	1e-116
357511005	349	Solute carrier family 35 member F2 [Medi	0.997	0.977	0.651	1e-112
224134462	267	predicted protein [Populus trichocarpa]	0.760	0.973	0.785	1e-107
115464161	354	Os05g0444300 [Oryza sativa Japonica Grou	0.915	0.884	0.588	3e-98
242088093	347	hypothetical protein SORBIDRAFT_09g02187	0.915	0.902	0.599	3e-98

>gi|297740093|emb|CBI30275.3| unnamed protein product [Vitis vinifera]

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 245/337 (72%), Positives = 290/337 (86%), Gaps = 1/337 (0%)

Query: 7   INSWWRSH-VTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALV 65
           ++SWWRSH + LRTLY+LFLGQ+VSF LA+ SF+SS IADLGVDAP+TQS F Y SLALV
Sbjct: 1   MSSWWRSHGILLRTLYVLFLGQVVSFVLAVASFSSSFIADLGVDAPLTQSFFTYLSLALV 60

Query: 66  YGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLT 125
           YG +LLYRRQ+LR++WYWYL LGFVDVQGN+LVNKAYQ+SSITSVTLLDC TI W I+LT
Sbjct: 61  YGSILLYRRQKLRISWYWYLFLGFVDVQGNYLVNKAYQYSSITSVTLLDCWTIPWVIILT 120

Query: 126 WLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNV 185
           W+FLGTRYSLWQ  GAALC++GLGLVLLSDAG  GG GSRPLLGD+LVIAGT+FFA SNV
Sbjct: 121 WIFLGTRYSLWQFFGAALCIVGLGLVLLSDAGVGGGDGSRPLLGDILVIAGTLFFALSNV 180

Query: 186 GEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFM 245
           GEEF VKKKDRVEVV MIG++GLLVS  ++SI+ELKSLESVEWST+I+LGF GYA S+F+
Sbjct: 181 GEEFCVKKKDRVEVVTMIGIFGLLVSVCEISIMELKSLESVEWSTDIILGFVGYAVSTFL 240

Query: 246 FYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYST 305
           FYT+ PF+L++SGAT FNLSLLT+DMWAVV RI FYHQKVDWLY+++F +V +GL+IYS 
Sbjct: 241 FYTIVPFLLQISGATWFNLSLLTSDMWAVVIRIFFYHQKVDWLYYISFAMVAVGLVIYSK 300

Query: 306 TEKDLNPMPDLENRISDLQYQILDNENVASTNEPSDS 342
           TEKD  P+P L +   + +YQ+LD EN  S NE   S
Sbjct: 301 TEKDPIPLPTLGDGNHNAEYQVLDEENTESRNETPAS 337

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359481996|ref|XP_002276979.2| PREDICTED: solute carrier family 35 member F1-like [Vitis vinifera]

 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 244/339 (71%), Positives = 290/339 (85%), Gaps = 3/339 (0%)

Query: 5   APINSWWRSH-VTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLA 63
           A +++WWRSH + LRTLY+LFLGQ+VSF LA+ SF+SS IADLGVDAP+TQS F Y SLA
Sbjct: 16  ADLDAWWRSHGILLRTLYVLFLGQVVSFVLAVASFSSSFIADLGVDAPLTQSFFTYLSLA 75

Query: 64  LVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIV 123
           LVYG +LLYRRQ+LR++WYWYL LGFVDVQGN+LVNKAYQ+SSITSVTLLDC TI W I+
Sbjct: 76  LVYGSILLYRRQKLRISWYWYLFLGFVDVQGNYLVNKAYQYSSITSVTLLDCWTIPWVII 135

Query: 124 LTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATS 183
           LTW+FLGTRYSLWQ  GAALC++GLGLVLLSDAG   G GSRPLLGD+LVIAGT+FFA S
Sbjct: 136 LTWIFLGTRYSLWQFFGAALCIVGLGLVLLSDAGV--GDGSRPLLGDILVIAGTLFFALS 193

Query: 184 NVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASS 243
           NVGEEF VKKKDRVEVV MIG++GLLVS  ++SI+ELKSLESVEWST+I+LGF GYA S+
Sbjct: 194 NVGEEFCVKKKDRVEVVTMIGIFGLLVSVCEISIMELKSLESVEWSTDIILGFVGYAVST 253

Query: 244 FMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIY 303
           F+FYT+ PF+L++SGAT FNLSLLT+DMWAVV RI FYHQKVDWLY+++F +V +GL+IY
Sbjct: 254 FLFYTIVPFLLQISGATWFNLSLLTSDMWAVVIRIFFYHQKVDWLYYISFAMVAVGLVIY 313

Query: 304 STTEKDLNPMPDLENRISDLQYQILDNENVASTNEPSDS 342
           S TEKD  P+P L +   + +YQ+LD EN  S NE   S
Sbjct: 314 SKTEKDPIPLPTLGDGNHNAEYQVLDEENTESRNETPAS 352

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740094|emb|CBI30276.3| unnamed protein product [Vitis vinifera]

 Score =  466 bits (1199), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 230/332 (69%), Positives = 274/332 (82%), Gaps = 1/332 (0%)

Query: 7   INSWWR-SHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALV 65
           +NSWWR +  +LRTL++L LGQ+VSF LA+  FTSS IADLGVDAP+TQS F Y  LALV
Sbjct: 1   MNSWWRCNEASLRTLHVLLLGQVVSFVLAVSGFTSSFIADLGVDAPLTQSFFTYLCLALV 60

Query: 66  YGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLT 125
            G +LLYRRQRL+V+WYWYL LGF+DVQGN+LVNKA+Q+SS+TSV LLDC TI W I+LT
Sbjct: 61  NGSILLYRRQRLQVSWYWYLFLGFIDVQGNYLVNKAFQYSSLTSVALLDCWTIPWVIILT 120

Query: 126 WLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNV 185
           W+FLGTRYS+WQ  GAALCV GLGLVLLSDAG  G GGSRPLLGD LVIAGT+  A SNV
Sbjct: 121 WIFLGTRYSIWQFFGAALCVAGLGLVLLSDAGVGGEGGSRPLLGDTLVIAGTLCIAMSNV 180

Query: 186 GEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFM 245
           GEEF VKKKDRVE++ M+G++GLLVS  ++SI+ELKSLES+EWST I+L F G+A S+F+
Sbjct: 181 GEEFCVKKKDRVELMSMLGLFGLLVSVCEISIVELKSLESIEWSTKIVLAFVGFALSNFL 240

Query: 246 FYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYST 305
           FYTL PF+LK+SGATMFNLS LT+DMWAVV RI FY QKVDWLY+L+F +V IG+IIYST
Sbjct: 241 FYTLVPFLLKISGATMFNLSALTSDMWAVVIRIFFYRQKVDWLYYLSFAVVAIGIIIYST 300

Query: 306 TEKDLNPMPDLENRISDLQYQILDNENVASTN 337
           TEKD  P P  E+     QYQ+L+ E+  S N
Sbjct: 301 TEKDPIPSPSPEDGNLSAQYQVLNGESTESRN 332

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359481998|ref|XP_003632702.1| PREDICTED: solute carrier family 35 member F1-like [Vitis vinifera]

 Score =  466 bits (1199), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 230/335 (68%), Positives = 274/335 (81%), Gaps = 1/335 (0%)

Query: 4   NAPINSWWR-SHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSL 62
              +NSWWR +  +LRTL++L LGQ+VSF LA+  FTSS IADLGVDAP+TQS F Y  L
Sbjct: 334 ECAMNSWWRCNEASLRTLHVLLLGQVVSFVLAVSGFTSSFIADLGVDAPLTQSFFTYLCL 393

Query: 63  ALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAI 122
           ALV G +LLYRRQRL+V+WYWYL LGF+DVQGN+LVNKA+Q+SS+TSV LLDC TI W I
Sbjct: 394 ALVNGSILLYRRQRLQVSWYWYLFLGFIDVQGNYLVNKAFQYSSLTSVALLDCWTIPWVI 453

Query: 123 VLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFAT 182
           +LTW+FLGTRYS+WQ  GAALCV GLGLVLLSDAG  G GGSRPLLGD LVIAGT+  A 
Sbjct: 454 ILTWIFLGTRYSIWQFFGAALCVAGLGLVLLSDAGVGGEGGSRPLLGDTLVIAGTLCIAM 513

Query: 183 SNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAAS 242
           SNVGEEF VKKKDRVE++ M+G++GLLVS  ++SI+ELKSLES+EWST I+L F G+A S
Sbjct: 514 SNVGEEFCVKKKDRVELMSMLGLFGLLVSVCEISIVELKSLESIEWSTKIVLAFVGFALS 573

Query: 243 SFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLII 302
           +F+FYTL PF+LK+SGATMFNLS LT+DMWAVV RI FY QKVDWLY+L+F +V IG+II
Sbjct: 574 NFLFYTLVPFLLKISGATMFNLSALTSDMWAVVIRIFFYRQKVDWLYYLSFAVVAIGIII 633

Query: 303 YSTTEKDLNPMPDLENRISDLQYQILDNENVASTN 337
           YSTTEKD  P P  E+     QYQ+L+ E+  S N
Sbjct: 634 YSTTEKDPIPSPSPEDGNLSAQYQVLNGESTESRN 668

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575633|ref|XP_002528716.1| conserved hypothetical protein [Ricinus communis] gi|223531810|gb|EEF33628.1| conserved hypothetical protein [Ricinus communis]

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 246/335 (73%), Positives = 290/335 (86%), Gaps = 4/335 (1%)

Query: 1   MNWNAPINS--WWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFA 58
           MNW    NS  WW+SH TL+ LYLL LGQ+VSF LA+ S TSSL+ DLG+DAP+TQS+F 
Sbjct: 1   MNWYGN-NSCRWWKSHATLKILYLLLLGQVVSFILAVCSLTSSLVVDLGIDAPITQSSFN 59

Query: 59  YFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTI 118
           YF+LALV+G +LLYRRQ+LRV+WYWYLLLGFVDVQGN+LVN+AYQ++SITSVTLLDC TI
Sbjct: 60  YFALALVFGSILLYRRQKLRVSWYWYLLLGFVDVQGNYLVNRAYQYTSITSVTLLDCWTI 119

Query: 119 AWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTI 178
            WAIVLTW FLGTRYS+WQL GAALCVLGLGLVLLSDAG  GGGGSRPLLGD+LVIAGTI
Sbjct: 120 VWAIVLTWFFLGTRYSIWQLFGAALCVLGLGLVLLSDAGVGGGGGSRPLLGDLLVIAGTI 179

Query: 179 FFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAG 238
           FFA SNVGEEFFVK KDRVEVV M+G++GLLVS VQLS+LELK+L+S+ W+ +I+L  AG
Sbjct: 180 FFALSNVGEEFFVKNKDRVEVVAMLGIFGLLVSVVQLSVLELKTLKSINWTADIILAIAG 239

Query: 239 YAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVI 298
           Y  S FMFYTL PFVLKL GATMFNLS+LT+DMWAVVFRICFYHQ+VDWLYFL+  +V +
Sbjct: 240 YTLSMFMFYTLTPFVLKLGGATMFNLSMLTSDMWAVVFRICFYHQEVDWLYFLSLAVVTV 299

Query: 299 GLIIYSTTEKDLN-PMPDLENRISDLQYQILDNEN 332
           GLIIYSTT+K+ + P+P LE   S+ +YQ+L++ N
Sbjct: 300 GLIIYSTTDKESSAPIPALEEGNSNGEYQVLNDGN 334

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357511003|ref|XP_003625790.1| Solute carrier family 35 member F1 [Medicago truncatula] gi|355500805|gb|AES82008.1| Solute carrier family 35 member F1 [Medicago truncatula]

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 232/346 (67%), Positives = 279/346 (80%), Gaps = 5/346 (1%)

Query: 1   MNWNAPINSWWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYF 60
           M+W   I++WW    TL+ L +L LGQLVSF LALMS TSSLIA  GVDAP+TQS F Y 
Sbjct: 1   MDWTT-ISTWWSRTATLQILGILLLGQLVSFLLALMSITSSLIAQFGVDAPLTQSLFTYG 59

Query: 61  SLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAW 120
           SLALVYG +LLYR Q+  V+WYWYLLLGF D QG +LV KAYQ++S+TSVTLLDC T+ W
Sbjct: 60  SLALVYGSILLYRHQKPLVSWYWYLLLGFADAQGCYLVIKAYQYTSVTSVTLLDCWTVPW 119

Query: 121 AIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDA---GGDGGGGSRPLLGDVLVIAGT 177
           AI+LTW+FLGTRYSLWQL G  LCVLGL LVL SD    GG GGGGS+P+LGDVLVI GT
Sbjct: 120 AILLTWIFLGTRYSLWQLCGGTLCVLGLSLVLFSDTWDGGGGGGGGSKPVLGDVLVIVGT 179

Query: 178 IFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFA 237
           +F+A SNV EEF VKKKDRVE V M+GVYG LV+A+++S+LELK+L+S++WS++I+L FA
Sbjct: 180 VFYAISNVVEEFCVKKKDRVETVTMLGVYGFLVTAIEVSVLELKTLKSIKWSSDIVLAFA 239

Query: 238 GYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVV 297
           GY  SSFMFY+LAPFVLKLSG+TMFNLSLLT+D+WAVVFR+  YHQKVDWLYF++F +V 
Sbjct: 240 GYGVSSFMFYSLAPFVLKLSGSTMFNLSLLTSDIWAVVFRVFIYHQKVDWLYFVSFLVVA 299

Query: 298 IGLIIYSTTEKDLNPM-PDLENRISDLQYQILDNENVASTNEPSDS 342
           IGLIIYSTTEK L P     E+   + +YQIL+ EN +ST   +DS
Sbjct: 300 IGLIIYSTTEKKLVPASATTEDENLNTEYQILNGENESSTFAQNDS 345

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357511005|ref|XP_003625791.1| Solute carrier family 35 member F2 [Medicago truncatula] gi|355500806|gb|AES82009.1| Solute carrier family 35 member F2 [Medicago truncatula]

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 226/347 (65%), Positives = 275/347 (79%), Gaps = 6/347 (1%)

Query: 1   MNWNAPINSWWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYF 60
           M+W   I++WW    TL+ L +L LGQLVSF LALMS TSSLIA  GVDAP+TQS F Y 
Sbjct: 1   MDWTT-ISTWWSRTATLQILGILLLGQLVSFLLALMSITSSLIAQFGVDAPLTQSLFTYG 59

Query: 61  SLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAW 120
           SLALVYG +LLYR Q+  V+WYWYLLLGF D QG +LV KAYQ++S+TSVTLLDC T+ W
Sbjct: 60  SLALVYGSILLYRHQKPLVSWYWYLLLGFADAQGCYLVIKAYQYTSVTSVTLLDCWTVPW 119

Query: 121 AIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDA----GGDGGGGSRPLLGDVLVIAG 176
           AI+LTW+FLGTRYSLWQL G  LCVLGL LVL SD     GG GGGGS+P+LGDVLVI G
Sbjct: 120 AILLTWIFLGTRYSLWQLCGGTLCVLGLSLVLFSDTWDGGGGGGGGGSKPILGDVLVIVG 179

Query: 177 TIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGF 236
           T+FFA SNV EEF VKKKDRVE V M+GVYG LV+A+++S+LELK+L+S++WS +I+L F
Sbjct: 180 TVFFAVSNVVEEFCVKKKDRVEAVTMLGVYGFLVTAIEVSVLELKTLKSIKWSGDIVLAF 239

Query: 237 AGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIV 296
           AGY  SSF++ +LAPFVLK  G+ MFNLSLLT+DMWAV+FR+  YHQKVDWLYF++F +V
Sbjct: 240 AGYGVSSFIYCSLAPFVLKFGGSAMFNLSLLTSDMWAVLFRVFIYHQKVDWLYFVSFLVV 299

Query: 297 VIGLIIYSTTEKDLNPM-PDLENRISDLQYQILDNENVASTNEPSDS 342
            IGLIIYSTTEK L P     E+   + +YQIL+ E+ ++T + SDS
Sbjct: 300 GIGLIIYSTTEKKLVPASATTEDENLNTEYQILNGESESTTLDQSDS 346

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134462|ref|XP_002327411.1| predicted protein [Populus trichocarpa] gi|222835965|gb|EEE74386.1| predicted protein [Populus trichocarpa]

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 205/261 (78%), Positives = 230/261 (88%), Gaps = 1/261 (0%)

Query: 47  GVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSS 106
           GVDAP+TQS+F Y +LAL+YG +LLYRRQ+L+V+WYWYLLLGFVDVQGN+LVNKAYQFSS
Sbjct: 1   GVDAPLTQSSFNYLALALIYGSILLYRRQKLQVSWYWYLLLGFVDVQGNYLVNKAYQFSS 60

Query: 107 ITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAG-GDGGGGSR 165
           ITSVTLLDC T+AW I LTW FLGTRY+LWQLLGAA+CVLGLGLVLLSDAG     GGS+
Sbjct: 61  ITSVTLLDCWTVAWVIALTWFFLGTRYTLWQLLGAAVCVLGLGLVLLSDAGVAHITGGSK 120

Query: 166 PLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLES 225
           P+LGD LVI GTIFFA SNVGEEF VKKK RVEVV MIGVYG LVSAV+LSI+ELKSLE+
Sbjct: 121 PVLGDFLVITGTIFFALSNVGEEFCVKKKGRVEVVTMIGVYGFLVSAVELSIVELKSLEA 180

Query: 226 VEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKV 285
           V WS +I+   AGY  S F+FY+LAPFVLKLSGATMFNLS+LTADMWAVVFR+ FYHQ+V
Sbjct: 181 VAWSKDIVFAIAGYTLSMFLFYSLAPFVLKLSGATMFNLSILTADMWAVVFRVFFYHQQV 240

Query: 286 DWLYFLAFGIVVIGLIIYSTT 306
           DWLYFL+F IV IGLIIYS T
Sbjct: 241 DWLYFLSFAIVAIGLIIYSLT 261

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115464161|ref|NP_001055680.1| Os05g0444300 [Oryza sativa Japonica Group] gi|50080280|gb|AAT69615.1| unknown protein [Oryza sativa Japonica Group] gi|113579231|dbj|BAF17594.1| Os05g0444300 [Oryza sativa Japonica Group] gi|215694600|dbj|BAG89791.1| unnamed protein product [Oryza sativa Japonica Group] gi|222631760|gb|EEE63892.1| hypothetical protein OsJ_18717 [Oryza sativa Japonica Group]

 Score =  364 bits (935), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 186/316 (58%), Positives = 235/316 (74%), Gaps = 3/316 (0%)

Query: 30  SFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGF 89
           +F++A+ SFTSSLIA LGVDAP+TQS FAY  L LVY  +LL RRQ+L++ WYWYL L F
Sbjct: 27  AFSMAVSSFTSSLIATLGVDAPLTQSFFAYLLLTLVYVPILLKRRQKLQIPWYWYLALAF 86

Query: 90  VDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLG 149
           +DVQGN+LV KAYQ+S ITSVTLLDC T+ W ++LTW  LGTRYS WQ++GA  CV GL 
Sbjct: 87  IDVQGNYLVVKAYQYSYITSVTLLDCWTVVWVVILTWYALGTRYSFWQIVGAGTCVAGLA 146

Query: 150 LVLLSDA-GGDGGGGSR-PLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYG 207
           LVLLSD+   D    S+ PLLGD LVIAGTIFFA SNVGEE+ VKKKDRVE V M  ++G
Sbjct: 147 LVLLSDSKSADAQDPSKIPLLGDALVIAGTIFFAFSNVGEEYCVKKKDRVEFVAMFALFG 206

Query: 208 LLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLL 267
           LLVS +Q+ I E K+L ++ WS  +L  FAG+A + FMFY++ PFVLK+SG+T+FNLSLL
Sbjct: 207 LLVSIIQILIFEKKNLVAIAWSPTMLCLFAGFAVALFMFYSITPFVLKMSGSTLFNLSLL 266

Query: 268 TADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLNP-MPDLENRISDLQYQ 326
           T+DMWAV  R+ FYHQ+++WLY++AF +V IGLIIYS  +   +       N  +  QYQ
Sbjct: 267 TSDMWAVAIRVLFYHQQINWLYYIAFAVVAIGLIIYSLNDHSSDSGTRTTANTEAAAQYQ 326

Query: 327 ILDNENVASTNEPSDS 342
            L  EN ++    +DS
Sbjct: 327 QLPGENNSTGIGSNDS 342

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242088093|ref|XP_002439879.1| hypothetical protein SORBIDRAFT_09g021870 [Sorghum bicolor] gi|241945164|gb|EES18309.1| hypothetical protein SORBIDRAFT_09g021870 [Sorghum bicolor]

 Score =  364 bits (934), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 190/317 (59%), Positives = 230/317 (72%), Gaps = 4/317 (1%)

Query: 30  SFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGF 89
           +F +A  SFTSSLIA+LGVDAP+TQS FAY  L LVY  ++L RRQ+L++AWYWYL L F
Sbjct: 21  AFAMAASSFTSSLIANLGVDAPLTQSFFAYLLLTLVYVPIVLRRRQKLQIAWYWYLALAF 80

Query: 90  VDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLG 149
            DVQGN+LV KAYQ+S ITSVTLLDC T+ W I+LTW  LGTRYSLWQ +GA  CV GL 
Sbjct: 81  FDVQGNYLVVKAYQYSYITSVTLLDCWTVVWVIILTWYALGTRYSLWQFVGAGTCVAGLA 140

Query: 150 LVLLSDAGG--DGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYG 207
           LVLLSDA    +   G  PLLGDVLVIAGT+ FA SNVGEE+ VKKKDRVEVV M+G++G
Sbjct: 141 LVLLSDAESPEEQDPGKMPLLGDVLVIAGTVGFAFSNVGEEYCVKKKDRVEVVAMLGLFG 200

Query: 208 LLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLL 267
           LL+S VQ+ I E K LE+V WS  ++  FAG+A + F+FYT+ PFVLK+SGAT+FNLSLL
Sbjct: 201 LLISIVQILIFERKGLEAVTWSPTMISLFAGFAVAIFIFYTITPFVLKMSGATLFNLSLL 260

Query: 268 TADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYS--TTEKDLNPMPDLENRISDLQY 325
           T+DMWAV  R+ FY Q+++WLY+LAF +V IGLIIYS   +  D       E      Q 
Sbjct: 261 TSDMWAVAIRVLFYQQQINWLYYLAFTVVAIGLIIYSLNDSSSDDETAGSTEAPAQYQQL 320

Query: 326 QILDNENVASTNEPSDS 342
            I DN     +N  S  
Sbjct: 321 PIEDNSTRIGSNSGSQE 337

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	342
TAIR|locus:2081262	333	AT3G59340 "AT3G59340" [Arabido	0.932	0.957	0.426	5.2e-65
TAIR|locus:2081212	339	AT3G59320 "AT3G59320" [Arabido	0.859	0.867	0.450	2.3e-64
WB|WBGene00022270	429	Y73E7A.3 [Caenorhabditis elega	0.397	0.317	0.404	3.4e-45
UNIPROTKB|Q5T1Q4	408	SLC35F1 "Solute carrier family	0.491	0.411	0.360	6.7e-45
MGI|MGI:2139810	408	Slc35f1 "solute carrier family	0.491	0.411	0.360	8.6e-45
DICTYBASE|DDB_G0287003	417	DDB_G0287003 "solute carrier f	0.497	0.407	0.346	1.4e-44
MGI|MGI:1919272	375	Slc35f2 "solute carrier family	0.412	0.376	0.373	3.2e-43
UNIPROTKB|Q8IXU6	374	SLC35F2 "Solute carrier family	0.394	0.360	0.377	3.6e-42
TAIR|locus:2081197	363	AT3G59310 "AT3G59310" [Arabido	0.660	0.622	0.407	9.6e-41
ASPGD|ASPL0000029133	399	AN5236 [Emericella nidulans (t	0.400	0.343	0.335	1.4e-35

TAIR|locus:2081262 AT3G59340 "AT3G59340" [Arabidopsis thaliana (taxid:3702)]

 Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
 Identities = 139/326 (42%), Positives = 197/326 (60%)

Query:    16 TLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQ 75
             T +TL  L LGQ++S      +FTSS +A  G++AP +Q+  +Y  LA+VYGG++LYRR 
Sbjct:    13 TKKTLIGLGLGQILSLLCTSNAFTSSELARKGINAPTSQTFLSYTLLAVVYGGIMLYRRP 72

Query:    76 RLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSL 135
              ++  WY Y LL  VDV+GNFLV KA Q++SITS+ LLDC  I   +VLTW+FL T+Y L
Sbjct:    73 TIKGKWYHYFLLALVDVEGNFLVVKANQYTSITSIMLLDCWAIPCVLVLTWMFLKTKYRL 132

Query:   136 WQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXLVIAGTIFFATSNVGEEFFVKKK 194
              +                                   LV+AG   +A SN  EEF VK  
Sbjct:   133 MKISGVFICIAGVVMVLFSDVHAGSRAGGSNPVKGDFLVLAGATLYAVSNTTEEFLVKNA 192

Query:   195 DRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVL 254
             D VE++  +G++G ++SA+Q++I E   L+++ WS + +  F  +A + F+FY+L P +L
Sbjct:   193 DTVELMTFMGLFGAIISAIQVAIFEQGELKAIHWSADAVFPFLRFAITMFLFYSLLPILL 252

Query:   255 KLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLNPMP 314
             + +G+TMF LSLLT+DMWAV+ RI  YH+KVDWLY+LAF    IGLIIYS  EKD     
Sbjct:   253 RTNGSTMFTLSLLTSDMWAVLIRIFAYHEKVDWLYYLAFATTAIGLIIYSMKEKD----- 307

Query:   315 DLENRISDLQYQILDNENVASTNEPS 340
             + E R  + + ++LD E   S  + S
Sbjct:   308 EEEER-EEQRKKLLDEEEGQSLPDTS 332

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2081212 AT3G59320 "AT3G59320" [Arabidopsis thaliana (taxid:3702)]

 Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
 Identities = 133/295 (45%), Positives = 182/295 (61%)

Query:    16 TLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQ 75
             T +TL  L LGQ++S    L++  +S IA  G+ AP +Q+   Y SLA+VYGG++LYRR 
Sbjct:    11 TKKTLIGLGLGQIISLLSTLIASIASEIARKGISAPTSQTFLGYVSLAIVYGGIMLYRRS 70

Query:    76 RLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSL 135
              ++V WY Y LL  VDV+ NFLV KA+Q +S+TS+ LLDC  I   +VLTW+FL TRY L
Sbjct:    71 AIKVKWYHYFLLAVVDVEANFLVVKAFQNTSMTSIMLLDCWAIPCVLVLTWVFLKTRYRL 130

Query:   136 WQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXLVIAGTIFFATSNVGEEFFVKKK 194
              +                                   LVIAG   +A SNV EEF VK  
Sbjct:   131 MKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVTEEFLVKNA 190

Query:   195 DRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVL 254
             D  E++  +G++G +++A+Q+SI E  ++ +++WST  +L + G A   F+FYTL   ++
Sbjct:   191 DVTELMAFLGLFGAIIAAIQISIFERGAVRAIQWSTEAILLYIGGALGLFLFYTLITILI 250

Query:   255 KLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKD 309
             K +G+TMFNLSLLT+DMWA++ R   YH+KVDWLYFLAF     GLIIYS  EKD
Sbjct:   251 KNNGSTMFNLSLLTSDMWAILIRTFGYHEKVDWLYFLAFATTATGLIIYSMKEKD 305

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=ISS

WB|WBGene00022270 Y73E7A.3 [Caenorhabditis elegans (taxid:6239)]

 Score = 280 (103.6 bits), Expect = 3.4e-45, Sum P(2) = 3.4e-45
 Identities = 55/136 (40%), Positives = 86/136 (63%)

Query:   172 LVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTN 231
             L +A  + +A  NV EEF VK+  R E + M+G++G +VS VQ ++ E ++L  + W   
Sbjct:   222 LCLAAAVMYAICNVAEEFLVKQHSRTEYLGMLGLFGCIVSGVQTAVFEQEALSKIVWDGT 281

Query:   232 ILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFL 291
             I+  FA +A S F+FY+L   VL+ + A MFNLS LTAD ++++F I  +     +LYF+
Sbjct:   282 IVSYFALFAFSMFIFYSLVTVVLQKTSALMFNLSTLTADFYSLLFGIFMFKDTFHYLYFV 341

Query:   292 AFGIVVIGLIIYSTTE 307
             +F + +IG +IYS  E
Sbjct:   342 SFIVCIIGSVIYSMKE 357

GO:0016020 "membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q5T1Q4 SLC35F1 "Solute carrier family 35 member F1" [Homo sapiens (taxid:9606)]

 Score = 284 (105.0 bits), Expect = 6.7e-45, Sum P(2) = 6.7e-45
 Identities = 61/169 (36%), Positives = 96/169 (56%)

Query:   172 LVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTN 231
             LV+ G   +  SNV EE+ ++   RVE + MIG++G   S +QL+I+E K L  V W   
Sbjct:   222 LVLGGATLYGISNVWEEYIIRTLSRVEFLGMIGLFGAFFSGIQLAIMEHKELLKVPWDWQ 281

Query:   232 ILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFL 291
             I L + G++A  F  Y+  P V+K + AT  NLSLLTAD++++   +  +H K   LY L
Sbjct:   282 IGLLYVGFSACMFGLYSFMPVVIKKTSATSVNLSLLTADLYSLFCGLFLFHYKFSGLYLL 341

Query:   292 AFGIVVIGLIIYSTTEKDLNPMPDLENRISDLQYQILDNENVASTNEPS 340
             +F  ++IGL++YS+T   +   P +  +  +    ++D    A   EPS
Sbjct:   342 SFFTILIGLVLYSSTSTYIAQDPRVYKQFRNPSGPVVDLPTTAQV-EPS 389

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:2139810 Slc35f1 "solute carrier family 35, member F1" [Mus musculus (taxid:10090)]

 Score = 280 (103.6 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
 Identities = 61/169 (36%), Positives = 96/169 (56%)

Query:   172 LVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTN 231
             LV+ G   +  SNV EE  ++   RVE + MIG++G   S +QL+I+E K L  V W   
Sbjct:   222 LVLGGATLYGISNVWEESIIRTLSRVEFLGMIGLFGAFFSGIQLAIMEHKELLKVPWDWQ 281

Query:   232 ILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFL 291
             I L + G++A  F  Y+  P V+K + AT  NLSLLTAD++++   +  +H K   LY L
Sbjct:   282 IGLLYVGFSACMFGLYSFMPVVIKKTSATSVNLSLLTADLYSLFCGLFLFHYKFSGLYLL 341

Query:   292 AFGIVVIGLIIYSTTEKDLNPMPDLENRISDLQYQILDNENVASTNEPS 340
             +F  ++IGL++YS+T   +   P +  +  +    ++D  + A   EPS
Sbjct:   342 SFFTILIGLVLYSSTSTYIAQDPRVYKQFRNPSGPVVDLPSTAQV-EPS 389

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

DICTYBASE|DDB_G0287003 DDB_G0287003 "solute carrier family 35 member protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 301 (111.0 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
 Identities = 60/173 (34%), Positives = 107/173 (61%)

Query:   172 LVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTN 231
             L +A ++ +A SNVG+E  VKK DRV  + MIG+YG +   +Q++ILE   L ++ WS  
Sbjct:   185 LCLASSVCYAISNVGQEATVKKYDRVTYLAMIGLYGSIFCGIQIAILERNELATMAWSGG 244

Query:   232 ILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFL 291
             ++    G+A   F+ Y+  P +++++GAT+ NLSLLT+DM+ ++  I  + + + WLYFL
Sbjct:   245 VVGYIVGFALCLFIMYSFTPTMMEIAGATVMNLSLLTSDMFGIIVAIFVFDRDLSWLYFL 304

Query:   292 AFGIVVIGLIIYSTTEKDLNPMPDLENRISD--LQYQILDNENVASTNEPSDS 342
             +F ++V  L+IY+ +   +    +++N I++       + N N  S N+ S++
Sbjct:   305 SFFVIVSALVIYNLSAPHVKSS-EVQNLINNDNSNNNNISNYNNGSLNDSSNN 356

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

MGI|MGI:1919272 Slc35f2 "solute carrier family 35, member F2" [Mus musculus (taxid:10090)]

 Score = 283 (104.7 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
 Identities = 53/142 (37%), Positives = 87/142 (61%)

Query:   172 LVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTN 231
             LV+ G   +A SNV EE+ VKK  R E + M+G++G ++S +QL I+E K +  ++W   
Sbjct:   201 LVLLGASLYAVSNVCEEYIVKKLSRQEFLGMVGLFGTIISGIQLLIVEYKDIARIQWDWK 260

Query:   232 ILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFL 291
             I L F  +A   F  Y+  P V+K++ AT  NL +LTAD++++ F +  +  K   LY L
Sbjct:   261 IALLFVAFALCMFCLYSFMPLVIKVTSATSVNLGILTADLYSLFFGLFLFEYKFSGLYIL 320

Query:   292 AFGIVVIGLIIY-STTEKDLNP 312
             +F ++++G I+Y ST  + + P
Sbjct:   321 SFTVIMVGFILYCSTPTRTVEP 342

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q8IXU6 SLC35F2 "Solute carrier family 35 member F2" [Homo sapiens (taxid:9606)]

 Score = 274 (101.5 bits), Expect = 3.6e-42, Sum P(2) = 3.6e-42
 Identities = 51/135 (37%), Positives = 83/135 (61%)

Query:   172 LVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTN 231
             LV+ G   +A SNV EE+ VKK  R E + M+G++G ++S +QL I+E K + S+ W   
Sbjct:   201 LVLLGASLYAISNVCEEYIVKKLSRQEFLGMVGLFGTIISGIQLLIVEYKDIASIHWDWK 260

Query:   232 ILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFL 291
             I L F  +A   F  Y+  P V+K++ AT  NL +LTAD++++   +  +  K   LY L
Sbjct:   261 IALLFVAFALCMFCLYSFMPLVIKVTSATSVNLGILTADLYSLFVGLFLFGYKFSGLYIL 320

Query:   292 AFGIVVIGLIIYSTT 306
             +F ++++G I+Y +T
Sbjct:   321 SFTVIMVGFILYCST 335

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

TAIR|locus:2081197 AT3G59310 "AT3G59310" [Arabidopsis thaliana (taxid:3702)]

 Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
 Identities = 93/228 (40%), Positives = 127/228 (55%)

Query:    16 TLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQ 75
             T +TL  L LGQL+S       FTSS +A  G++ P +Q    Y  LA+VYG ++LYRR 
Sbjct:    10 TKKTLIGLGLGQLLSLLATSNGFTSSELARKGINVPTSQCFLNYVLLAIVYGSIMLYRRS 69

Query:    76 RLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSL 135
              ++  WY+Y LL FVDV+ NFLV KAYQ++S+TSV LLDC  I   +VLTW +L T+Y L
Sbjct:    70 DIKAKWYYYFLLAFVDVEANFLVVKAYQYTSLTSVMLLDCWAIPCVLVLTWFYLKTKYRL 129

Query:   136 WQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXLVIAGTIFFATSNVGEEFFVKKK 194
              +                                   LV+AG   +A SN  EEF VK  
Sbjct:   130 MKISGVFICIVGVFMVVFSDVHAGDRAGGSNPVKGDFLVLAGATLYAVSNTSEEFLVKNA 189

Query:   195 DRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAAS 242
             D VE++  +G +G ++SA+Q+SILE   L+++ WST  + GF   A S
Sbjct:   190 DTVELMTFLGFFGAIISAIQVSILERDELKAIHWSTGAV-GFLAMAIS 236

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

ASPGD|ASPL0000029133 AN5236 [Emericella nidulans (taxid:162425)]

 Score = 260 (96.6 bits), Expect = 1.4e-35, Sum P(2) = 1.4e-35
 Identities = 46/137 (33%), Positives = 78/137 (56%)

Query:   174 IAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNIL 233
             + G  F+  +N GEEFFV      EV+  +G +G++++ VQ +I + KS++   W   + 
Sbjct:   225 LLGASFYGLANTGEEFFVSTAPVYEVIGQMGFFGMIINGVQAAIFDRKSIQHAHWDGQVG 284

Query:   234 LGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAF 293
                 GY     +FY+ AP + +L+ A  FN+SLLT + W V+  I  +H  V W+Y +AF
Sbjct:   285 GYLTGYTLCLSIFYSTAPLLFRLASAAFFNISLLTMNFWGVIIGIRVFHYSVHWMYPIAF 344

Query:   294 GIVVIGLIIYSTTEKDL 310
              ++++G ++Y    K L
Sbjct:   345 VLIIVGQLVYYLGRKVL 361

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00021639001 SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (323 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	342
pfam06027	336	pfam06027, DUF914, Eukaryotic protein of unknown f	1e-104
pfam08449	303	pfam08449, UAA, UAA transporter family	1e-09
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	5e-07
pfam00892	126	pfam00892, EamA, EamA-like transporter family	0.003
pfam13536	112	pfam13536, EmrE, Multidrug resistance efflux trans	0.004

>gnl|CDD|218861 pfam06027, DUF914, Eukaryotic protein of unknown function (DUF914)

 Score =  310 bits (795), Expect = e-104
 Identities = 139/302 (46%), Positives = 195/302 (64%), Gaps = 8/302 (2%)

Query: 16  TLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRR- 74
           T RTL  L LGQ++S  +   + TS  +A+ GV+AP  Q+   Y  L LVY G+L +RR 
Sbjct: 9   TKRTLIGLALGQILSLCITGTATTSQYLAEKGVNAPAFQTFLNYALLFLVYTGILAFRRG 68

Query: 75  -----QRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFL 129
                  ++  W+ Y++L  +DV+ N+LV KAYQ++++TSV LLDC  I   +VL+W FL
Sbjct: 69  EKNLLVIIKRKWWKYIILALIDVEANYLVVKAYQYTNLTSVQLLDCWAIPVVLVLSWFFL 128

Query: 130 GTRYSLWQLLGAALCVLGLGLVLLSD--AGGDGGGGSRPLLGDVLVIAGTIFFATSNVGE 187
             RY    +LG  +C+LG+  V+ SD  AG    GGS P+LGD+LV+AG   +A SNV E
Sbjct: 129 KVRYRASHILGVVICILGVVCVVGSDVLAGRRAYGGSNPVLGDILVLAGATLYAVSNVTE 188

Query: 188 EFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFY 247
           EF VKK  R E + M+G++G ++S +Q +I E K+L  + W   I L FAG+A   F+ Y
Sbjct: 189 EFLVKKLSRTEFLGMLGLFGAIISGIQTAIFERKALYKIHWDWEIGLLFAGFALCMFLLY 248

Query: 248 TLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTE 307
           +L P ++K + ATMFNLSLLT+D W+++  I  +H KV WLYFLAF  ++IGLIIYS  E
Sbjct: 249 SLMPILIKKTSATMFNLSLLTSDFWSLLIGIFLFHYKVSWLYFLAFATIIIGLIIYSMKE 308

Query: 308 KD 309
            D
Sbjct: 309 TD 310

This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as being putative membrane proteins. Length = 336

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score = 58.0 bits (141), Expect = 1e-09
 Identities = 53/266 (19%), Positives = 104/266 (39%), Gaps = 24/266 (9%)

Query: 57  FAYFSLALVYGGVLLYRRQRLR---VAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLL 113
           FA F    + G + L   ++L+   +    Y+L+       + L N+A ++ S  +  + 
Sbjct: 37  FAQFLFISLVGLLYLLLFKKLKPRKIPLKTYVLIVATFFLSSVLNNEALKYISYPTHVIF 96

Query: 114 DCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGS---RPLLGD 170
             C +   ++L  L  G RYS  Q L A L  LG+ +  L+ A              +G 
Sbjct: 97  KSCKLIPVMILGILIYGKRYSSLQYLSALLITLGVIIFTLASAKDSKNSKLTTFSDNVG- 155

Query: 171 VLVIAGTIFF--ATSNVGEEFFVK-KKDRVEVVC---MIGVYGLLVSAVQLSILELKSLE 224
           + ++ G +     T N  E+ + K  K   E++    ++ +   L+  + +    L S E
Sbjct: 156 IALLFGALLMDALTGNTQEKLYKKYGKHSKEMMFYSHLLSLPFFLLGLLDIRTGLLFSAE 215

Query: 225 S------VEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRI 278
           S            +L     Y    F+FY ++ F     GA    L        +++  +
Sbjct: 216 SFCLRHPSVLFYLLLNSLTQYVGQFFVFYLISEF-----GALTVTLVTTLRKFVSLLLSV 270

Query: 279 CFYHQKVDWLYFLAFGIVVIGLIIYS 304
             +   +    +L   +V +G+ +Y+
Sbjct: 271 LLFGNPLTLQQWLGTLLVFLGIFLYA 296

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 50.3 bits (120), Expect = 5e-07
 Identities = 62/295 (21%), Positives = 111/295 (37%), Gaps = 12/295 (4%)

Query: 18  RTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRL 77
             L  L    L      L      L  +         +     +  L+   +LL  R   
Sbjct: 4   ALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLR 63

Query: 78  RVAWYWYLLL---GFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTW-LFLGTRY 133
                W LLL            L+  A +++S +  +L+      +  +L   L LG R 
Sbjct: 64  PALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERL 123

Query: 134 SLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKK 193
           SL Q+LG  L + G+ L+LL    G GGGG   LLG +L +A  + +A      +   + 
Sbjct: 124 SLLQILGILLALAGVLLILL----GGGGGGILSLLGLLLALAAALLWALYTALVKRLSRL 179

Query: 194 KDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFV 253
                 + +  +  LL+  +         + S  W   + LG      +  ++Y      
Sbjct: 180 GPVTLALLLQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLAYLLWYYA---- 235

Query: 254 LKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEK 308
           L+L GA++  L  L   ++A +  +    + +     L   +VV+G+++ S   +
Sbjct: 236 LRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLRAR 290

Length = 292

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 37.2 bits (87), Expect = 0.003
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%)

Query: 80  AWYWYLLLGFVD-VQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQL 138
           A    L LG      G  L   A ++ S ++ +++   +  + ++L+ L LG + +L QL
Sbjct: 52  AILALLYLGLFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQL 111

Query: 139 LGAALCVLGLGLVLL 153
           LG  L +LG+ L+LL
Sbjct: 112 LGIVLILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|222207 pfam13536, EmrE, Multidrug resistance efflux transporter

 Score = 36.5 bits (85), Expect = 0.004
 Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 8/111 (7%)

Query: 55  SAFAYFSLALVYGGVLLYRRQRLRV-------AWYWYLLLGFVDVQGNFLVNKAYQFSSI 107
           ++  Y  +AL+   ++L R +   V        W W +L G +      L+  A Q+   
Sbjct: 1   ASLRYLFMALLLLLIVLIRGRLGDVFRALKTKPWLWLILAGLIGFLFYALLCLALQYGPG 60

Query: 108 TSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGG 158
             V  +   T  +A +L  L    R    +LL +A+ + G+ L+ +++A G
Sbjct: 61  W-VVAITALTPVFAALLGRLLFKQRLPKRELLASAIILAGVVLMQVTEATG 110

This is a membrane protein family acting as a multidrug resistance efflux transporter. Length = 112

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	342
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	100.0
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	99.98
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.97
PRK11689	295	aromatic amino acid exporter; Provisional	99.97
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.97
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.97
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.97
KOG2766	336	consensus Predicted membrane protein [Function unk	99.96
PRK15430	296	putative chloramphenical resistance permease RarD;	99.96
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.96
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.94
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.92
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.91
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.91
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.9
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.89
KOG2765	416	consensus Predicted membrane protein [Function unk	99.86
COG2962	293	RarD Predicted permeases [General function predict	99.86
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.86
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.79
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.78
KOG1581	327	consensus UDP-galactose transporter related protei	99.74
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.73
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.67
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.66
KOG1580	337	consensus UDP-galactose transporter related protei	99.64
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.57
KOG1582	367	consensus UDP-galactose transporter related protei	99.54
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.52
COG2510	140	Predicted membrane protein [Function unknown]	99.42
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.41
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.37
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.33
COG2510	140	Predicted membrane protein [Function unknown]	99.31
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.27
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.27
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.23
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.18
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.17
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.13
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.11
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	99.11
PRK13499	345	rhamnose-proton symporter; Provisional	98.94
PRK15430	296	putative chloramphenical resistance permease RarD;	98.92
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.91
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.87
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.86
PLN00411	358	nodulin MtN21 family protein; Provisional	98.8
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.76
PRK11272	292	putative DMT superfamily transporter inner membran	98.74
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.7
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.6
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.6
PRK11689	295	aromatic amino acid exporter; Provisional	98.59
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.56
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.56
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	98.47
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.47
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.38
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.37
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.3
COG2962	293	RarD Predicted permeases [General function predict	98.27
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.25
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.22
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.94
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	97.88
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.87
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.83
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.82
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.79
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.75
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.74
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.73
COG2076	106	EmrE Membrane transporters of cations and cationic	97.72
PRK11431	105	multidrug efflux system protein; Provisional	97.71
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.57
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.56
COG2076	106	EmrE Membrane transporters of cations and cationic	97.45
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.45
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	97.38
PRK11431	105	multidrug efflux system protein; Provisional	97.38
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.35
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.22
PRK13499	345	rhamnose-proton symporter; Provisional	97.21
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	97.15
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.15
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.08
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.72
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	96.56
KOG4510	346	consensus Permease of the drug/metabolite transpor	96.51
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.4
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	96.16
KOG2765	416	consensus Predicted membrane protein [Function unk	95.98
KOG1581	327	consensus UDP-galactose transporter related protei	95.51
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.49
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	95.39
KOG1580	337	consensus UDP-galactose transporter related protei	95.31
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.06
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	93.95
KOG2922	335	consensus Uncharacterized conserved protein [Funct	93.73
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	93.72
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	93.24
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	93.2
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	92.25
KOG1443	349	consensus Predicted integral membrane protein [Fun	90.45
PRK02237	109	hypothetical protein; Provisional	89.41
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	89.17
PRK02237	109	hypothetical protein; Provisional	88.51
KOG1582	367	consensus UDP-galactose transporter related protei	88.36
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	88.2
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	87.99
KOG3912	372	consensus Predicted integral membrane protein [Gen	87.47
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	84.93
KOG4831	125	consensus Unnamed protein [Function unknown]	83.96
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	83.19
COG3169	116	Uncharacterized protein conserved in bacteria [Fun	82.56
PF04342	108	DUF486: Protein of unknown function, DUF486; Inter	81.59
PF04342	108	DUF486: Protein of unknown function, DUF486; Inter	81.16

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=100.00  E-value=3.1e-38  Score=279.99  Aligned_cols=300  Identities=44%  Similarity=0.819  Sum_probs=273.7

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhhh------hhHHHHHHHHHH
Q 019344           15 VTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR------LRVAWYWYLLLG   88 (342)
Q Consensus        15 ~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g   88 (342)
                      ++||.|+++++|++++++.++.+..++.+..++.+.|...+++.+....+++.+....|+..      .+++|+++++.+
T Consensus         7 ~~~~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla   86 (334)
T PF06027_consen    7 FTRRFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLA   86 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHH
Confidence            57899999999999999999999999999999888899999999998888887776655433      477899999999


Q ss_pred             HHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecCCCC--CCCCCCcc
Q 019344           89 FVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGG--DGGGGSRP  166 (342)
Q Consensus        89 ~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~--~~~~~~~~  166 (342)
                      ++...++++.+.|++|++.+.++++.++..+++.+++++++|+|.++.|++|+++++.|+.++...|...  ++..+++.
T Consensus        87 ~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~  166 (334)
T PF06027_consen   87 LLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNP  166 (334)
T ss_pred             HHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCcc
Confidence            9999999999999999999999999999999999999999999999999999999999999999988522  22345678


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhhhcccccccccchhHHHHHHHHHHHHHHH
Q 019344          167 LLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMF  246 (342)
Q Consensus       167 ~~G~~l~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (342)
                      .+|+++++.+++.||+++++.|+..++.+..+...+.++++.+++.+...++|..+.+...|++.....+++...+.+..
T Consensus       167 i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~lf~~  246 (334)
T PF06027_consen  167 ILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALCLFLF  246 (334)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999988888899988888888888888888888899999


Q ss_pred             HHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCCCCCCCCC
Q 019344          247 YTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLNPMP  314 (342)
Q Consensus       247 ~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~~~  314 (342)
                      |.+....++..+|+..++..++..+++++++++++|+++++..++|.++|++|.++|...+++.++++
T Consensus       247 y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~~~  314 (334)
T PF06027_consen  247 YSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEEEAR  314 (334)
T ss_pred             HHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcccccc
Confidence            99999999999999999999999999999999999999999999999999999999998776655444

Some of the sequences in this family are annotated as putative membrane proteins.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=4.1e-32  Score=246.23  Aligned_cols=294  Identities=14%  Similarity=0.136  Sum_probs=222.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhh--hh-h---hHHHHHHHHHHHH
Q 019344           17 LRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRR--QR-L---RVAWYWYLLLGFV   90 (342)
Q Consensus        17 ~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~--~~-~---~~~~~~~~~~g~~   90 (342)
                      ||.-+.+..+..+-+..++....++...+ ...+|....++|+.++.++++++.+.++  ++ .   ++++..+.+.|++
T Consensus         9 ~~~~~~~~~~~~~q~~~~~~~~~~k~a~~-~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~   87 (358)
T PLN00411          9 RREAVFLTAMLATETSVVGISTLFKVATS-KGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFL   87 (358)
T ss_pred             hhccchHHHHHHHHHHHHHHHHHHHHHHH-CCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHH
Confidence            34455566677777888888877777764 5566788999999999888888765332  11 1   3466788888888


Q ss_pred             HHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHH------hcccchHHHHHHHHHHHhhhhhheecCCCC------
Q 019344           91 DVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLF------LGTRYSLWQLLGAALCVLGLGLVLLSDAGG------  158 (342)
Q Consensus        91 ~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~------l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~------  158 (342)
                      +...+.+++.|++|++++.++++.+++|+++.++++++      +|||+++++++|++++++|+.++...+...      
T Consensus        88 g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~  167 (358)
T PLN00411         88 GSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASS  167 (358)
T ss_pred             HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence            85457789999999999999999999999999999999      699999999999999999999987533200      


Q ss_pred             --------C---C-CCCCcchHHHHHHHHHHHHHHHHHHHHHHhhccCChH-HHHHHHHHHHHHHHHHHHHhhhcccccc
Q 019344          159 --------D---G-GGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRV-EVVCMIGVYGLLVSAVQLSILELKSLES  225 (342)
Q Consensus       159 --------~---~-~~~~~~~~G~~l~l~aa~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (342)
                              .   . ....+...|++++++++++||+|.++.|+..++.++. ...+++..++.+...++....+..+...
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~  247 (358)
T PLN00411        168 PPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSV  247 (358)
T ss_pred             cccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCccc
Confidence                    0   0 1112235699999999999999999999988887554 4455555555444433444443321111


Q ss_pred             --cccchh-HHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHh
Q 019344          226 --VEWSTN-ILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLII  302 (342)
Q Consensus       226 --~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l  302 (342)
                        ..++.. ..+.+.++. + .++|.+|++++++.++..+++..+++|+++++++++++||++++.+++|+++|+.|+++
T Consensus       248 ~~~~~~~~~~~i~y~~i~-t-~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l  325 (358)
T PLN00411        248 WIIHFDITLITIVTMAII-T-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYA  325 (358)
T ss_pred             ceeccchHHHHHHHHHHH-H-HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Confidence              112222 234444443 4 46889999999999999999999999999999999999999999999999999999999


Q ss_pred             hccCCCCCCCC
Q 019344          303 YSTTEKDLNPM  313 (342)
Q Consensus       303 ~~~~~~~~~~~  313 (342)
                      .++.++|+.++
T Consensus       326 ~~~~~~~~~~~  336 (358)
T PLN00411        326 VMWGKANEEKD  336 (358)
T ss_pred             HHhhhhhhhhh
Confidence            98866655433

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.98  E-value=6.5e-29  Score=221.74  Aligned_cols=269  Identities=14%  Similarity=0.131  Sum_probs=207.1

Q ss_pred             HHHHHHHHHHHHHHhc---CCCchHHHHHHHHHHHHHHHHHHHHHhhhh--hhHHHHHHHHHHHHHHHH-HHHHHHHh-h
Q 019344           31 FTLALMSFTSSLIADL---GVDAPVTQSAFAYFSLALVYGGVLLYRRQR--LRVAWYWYLLLGFVDVQG-NFLVNKAY-Q  103 (342)
Q Consensus        31 l~~~~~~~~~~~~~~~---~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~-~~~~~~al-~  103 (342)
                      ++.....|+++.+..|   .+.+|...+++|+.++.++++++...++++  .+++++.....|.++... +.+++.+. +
T Consensus        13 ~~~~~~iWg~~~~~~K~~~~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~   92 (292)
T PRK11272         13 LFALYIIWGSTYLVIRIGVESWPPLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLAVGNGMVTVAEHQ   92 (292)
T ss_pred             HHHHHHHHhhHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            3344444555555554   357899999999999988887776544432  356788888888887554 77888888 9


Q ss_pred             ccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecCCCCCCCCCCcchHHHHHHHHHHHHHHHH
Q 019344          104 FSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATS  183 (342)
Q Consensus       104 ~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~  183 (342)
                      +.+++.++++.++.|+++.+++.+ +|||+++++++|++++++|+.++..++.  .    +....|++++++++++||.|
T Consensus        93 ~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~--~----~~~~~G~l~~l~a~~~~a~~  165 (292)
T PRK11272         93 NVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGN--L----SGNPWGAILILIASASWAFG  165 (292)
T ss_pred             cCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcc--c----ccchHHHHHHHHHHHHHHHH
Confidence            999999999999999999999986 6999999999999999999998865431  1    23467999999999999999


Q ss_pred             HHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH
Q 019344          184 NVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFN  263 (342)
Q Consensus       184 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  263 (342)
                      .+..|+..++ ++.....+....+.....+.....+.......+...+..+.+.+.. ++...|.++++++++.++...+
T Consensus       166 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~-~s~~~~~l~~~~~~~~~~~~~s  243 (292)
T PRK11272        166 SVWSSRLPLP-VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVF-GSIIAISAYMYLLRNVRPALAT  243 (292)
T ss_pred             HHHHHhcCCC-cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHH-HHHHHHHHHHHHHhhcCHHHHH
Confidence            9999997544 3344455555555554432222222211111223344566666666 7778889999999999999999


Q ss_pred             hHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCCC
Q 019344          264 LSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEK  308 (342)
Q Consensus       264 ~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  308 (342)
                      ...+++|+++.+++++++||++++.+++|+++++.|+++.++.++
T Consensus       244 ~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        244 SYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999877544

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.97  E-value=4.9e-28  Score=216.10  Aligned_cols=279  Identities=15%  Similarity=0.091  Sum_probs=211.8

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHHHHHH
Q 019344           16 TLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR-LRVAWYWYLLLGFVDVQG   94 (342)
Q Consensus        16 ~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~   94 (342)
                      +-+.++++++..+..+.++......+....  ..+|..+.++|+.++.++++++..+++++ .+++++..+..|++....
T Consensus         7 ~~~~~~~~~~~~la~~~~~~~~~~~K~~~~--~~~~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   84 (293)
T PRK10532          7 KLPVWLPILLLLIAMASIQSGASLAKSLFP--LVGAPGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVSLGGM   84 (293)
T ss_pred             ccccchHHHHHHHHHHHHHhhHHHHHHHHH--HcCHHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHHHHHH
Confidence            345577777777777777666665555444  47899999999999988887766543333 366788888899887777


Q ss_pred             HHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecCCCCCCCCCCcchHHHHHHH
Q 019344           95 NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVI  174 (342)
Q Consensus        95 ~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l  174 (342)
                      +.++++++++.|++.++++.++.|+++.+++.    ||..+  ..++.++++|+.++..++.  +  .++.+..|+++++
T Consensus        85 ~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~--~~~~~i~~~Gv~li~~~~~--~--~~~~~~~G~ll~l  154 (293)
T PRK10532         85 NYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVD--FVWVVLAVLGLWFLLPLGQ--D--VSHVDLTGAALAL  154 (293)
T ss_pred             HHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHH--HHHHHHHHHHHheeeecCC--C--cccCChHHHHHHH
Confidence            88899999999999999999999999988763    55544  4556778999988775432  1  1233467999999


Q ss_pred             HHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 019344          175 AGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVL  254 (342)
Q Consensus       175 ~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (342)
                      +++++||.|.+..|+..++.++.... +....+.+... +....... ....++..+....+.+++ ++...|.++++++
T Consensus       155 ~aa~~~a~~~v~~r~~~~~~~~~~~~-~~~~~~~~~l~-~~~~~~~~-~~~~~~~~~~~~l~lgv~-~t~~~~~l~~~~~  230 (293)
T PRK10532        155 GAGACWAIYILSGQRAGAEHGPATVA-IGSLIAALIFV-PIGALQAG-EALWHWSILPLGLAVAIL-STALPYSLEMIAL  230 (293)
T ss_pred             HHHHHHHHHHHHHHHHhccCCchHHH-HHHHHHHHHHH-HHHHHccC-cccCCHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence            99999999999999988777776653 44444444433 33332221 111223333344567776 8889999999999


Q ss_pred             hhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCCCCC
Q 019344          255 KLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDL  310 (342)
Q Consensus       255 ~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~  310 (342)
                      ++.++..++...++||+++.+++++++||++++.+++|+++|+.|+....+.++|+
T Consensus       231 ~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~  286 (293)
T PRK10532        231 TRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRRE  286 (293)
T ss_pred             HhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            99999999999999999999999999999999999999999999999998766553

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.97  E-value=1.5e-28  Score=219.60  Aligned_cols=276  Identities=15%  Similarity=0.139  Sum_probs=197.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHH-HHHHHHH
Q 019344           23 LFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQG-NFLVNKA  101 (342)
Q Consensus        23 ~~~~~~~al~~~~~~~~~~~~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~a  101 (342)
                      ++++....++|+......+...  ...+|..+.++|+.++.+++.++..  +++.++++++..+.+.++... +.+.+.+
T Consensus         6 ~l~~l~a~~~Wg~~~~~~k~~~--~~~~P~~~~~~R~~~a~l~l~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~a   81 (295)
T PRK11689          6 TLIGLIAILLWSTMVGLIRGVS--ESLGPVGGAAMIYSVSGLLLLLTVG--FPRLRQFPKRYLLAGGLLFVSYEICLALS   81 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHH--ccCChHHHHHHHHHHHHHHHHHHcc--ccccccccHHHHHHHhHHHHHHHHHHHHH
Confidence            3344444444444443333322  3578999999999999888776542  222333333344444444444 6667777


Q ss_pred             hhc----cchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecCCCCC--C--CCCCcchHHHHHH
Q 019344          102 YQF----SSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGD--G--GGGSRPLLGDVLV  173 (342)
Q Consensus       102 l~~----~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~--~--~~~~~~~~G~~l~  173 (342)
                      +++    .++++++++.+++|+++.+++++++|||+++++++|++++++|+.++..++.+.+  +  ........|++++
T Consensus        82 ~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~  161 (295)
T PRK11689         82 LGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLA  161 (295)
T ss_pred             HHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHH
Confidence            754    5778889999999999999999999999999999999999999999987652100  0  0112345799999


Q ss_pred             HHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 019344          174 IAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFV  253 (342)
Q Consensus       174 l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (342)
                      ++++++||.|.++.|+..++.++.....   ..+.+...++.. .+.......++..+..+.+.+ . ++...|.+++++
T Consensus       162 l~aa~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~~-~-~t~~~~~l~~~a  235 (295)
T PRK11689        162 FIGAFIWAAYCNVTRKYARGKNGITLFF---ILTALALWIKYF-LSPQPAMVFSLPAIIKLLLAA-A-AMGFGYAAWNVG  235 (295)
T ss_pred             HHHHHHHHHHHHHHhhccCCCCchhHHH---HHHHHHHHHHHH-HhcCccccCCHHHHHHHHHHH-H-HHHHHHHHHHHH
Confidence            9999999999999999887777665422   222222222222 222222223333444455545 3 678889999999


Q ss_pred             HhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCCC
Q 019344          254 LKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEK  308 (342)
Q Consensus       254 ~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  308 (342)
                      +++.++...+...+++|+++++++++++||++++.+++|+++|+.|+++....++
T Consensus       236 l~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~  290 (295)
T PRK11689        236 ILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATR  290 (295)
T ss_pred             HHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHh
Confidence            9999999999999999999999999999999999999999999999988876443

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.97  E-value=4.3e-28  Score=217.22  Aligned_cols=272  Identities=17%  Similarity=0.164  Sum_probs=200.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHH-HHHHHHHhhc
Q 019344           26 GQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQG-NFLVNKAYQF  104 (342)
Q Consensus        26 ~~~~al~~~~~~~~~~~~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~al~~  104 (342)
                      ....+++|+......+...  ++.+|...+++|+.++.+.+.++..+++    .+++.....|++.... ..+++.++++
T Consensus         9 ~l~~~~~Wg~~~~~~k~~~--~~~~p~~~~~~R~~~a~~~l~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~   82 (299)
T PRK11453          9 ALLVVVVWGLNFVVIKVGL--HNMPPLMLAGLRFMLVAFPAIFFVARPK----VPLNLLLGYGLTISFGQFAFLFCAINF   82 (299)
T ss_pred             HHHHHHHHhhhHHHHHHHH--hcCCHHHHHHHHHHHHHHHHHHHhcCCC----CchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3444555555554444333  3578999999999998766655543222    2234455556655555 5577889988


Q ss_pred             -cchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecCCCCCCCCCCcchHHHHHHHHHHHHHHHH
Q 019344          105 -SSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATS  183 (342)
Q Consensus       105 -~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~  183 (342)
                       .+++.++++.+++|+++.+++++++|||++++++++++++++|+.++..++.  +  ..+.+..|+++++.++++||.|
T Consensus        83 ~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~--~--~~~~~~~G~~l~l~aal~~a~~  158 (299)
T PRK11453         83 GMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSL--N--GQHVAMLGFMLTLAAAFSWACG  158 (299)
T ss_pred             cCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccC--C--CcchhHHHHHHHHHHHHHHHHH
Confidence             5889999999999999999999999999999999999999999999986532  1  1123467999999999999999


Q ss_pred             HHHHHHhhccCChHH---HHHHHHHHHHHHHHHHHHhhhccc-----ccccccchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 019344          184 NVGEEFFVKKKDRVE---VVCMIGVYGLLVSAVQLSILELKS-----LESVEWSTNILLGFAGYAASSFMFYTLAPFVLK  255 (342)
Q Consensus       184 ~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (342)
                      .++.|+..++.+...   ...+....+.+.........+...     ....++..+..+.+.+.+ ++...|.+++++++
T Consensus       159 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~-~t~~~~~l~~~~l~  237 (299)
T PRK11453        159 NIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFV-ATIVGYGIWGTLLG  237 (299)
T ss_pred             HHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence            999999866543322   223333333222111111222211     122344455667777777 88888999999999


Q ss_pred             hhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCCC
Q 019344          256 LSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEK  308 (342)
Q Consensus       256 ~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  308 (342)
                      +.++...+...+++|+++.+++++++||++++.+++|++++++|+++..++++
T Consensus       238 ~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        238 RYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             hCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            99999999999999999999999999999999999999999999998887654

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.97  E-value=1.3e-28  Score=221.21  Aligned_cols=257  Identities=15%  Similarity=0.140  Sum_probs=200.6

Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHH---Hhhhh-hhHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHH
Q 019344           47 GVDAPVTQSAFAYFSLALVYGGVLL---YRRQR-LRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAI  122 (342)
Q Consensus        47 ~~~~p~~~~~~r~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~  122 (342)
                      ....|...++.|+..+.+.+.....   +++++ .+++++.++..|++....+.+.+.|++|++++.++++.+++|++++
T Consensus        27 ~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~  106 (302)
T TIGR00817        27 VFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSV  106 (302)
T ss_pred             hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHH
Confidence            3567999999999888666554421   12222 2678999999999987779999999999999999999999999999


Q ss_pred             HHHHHHhcccchHHHHHHHHHHHhhhhhheecCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhc--cCChHHHH
Q 019344          123 VLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVK--KKDRVEVV  200 (342)
Q Consensus       123 il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~~~~~~--~~~~~~~~  200 (342)
                      +++++++|||++++++.+++++++|+.+....+       .+.+..|++++++++++||+|.+..|+..+  +.|+.+..
T Consensus       107 ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~-------~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~  179 (302)
T TIGR00817       107 VLSAFFLGQEFPSTLWLSLLPIVGGVALASDTE-------LSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLY  179 (302)
T ss_pred             HHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCc-------ccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHH
Confidence            999999999999999999999999998764332       134577999999999999999999999888  78889999


Q ss_pred             HHHHHHHHHHHHHHHHhhhccccccc---c----cch-hHH--HHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhHhhhHH
Q 019344          201 CMIGVYGLLVSAVQLSILELKSLESV---E----WST-NIL--LGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTAD  270 (342)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~p  270 (342)
                      .++...+.+...+.....+..+....   .    +.. ...  ....+.. +...++.+++.++++.++...++..+++|
T Consensus       180 ~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~sa~t~sv~~~l~p  258 (302)
T TIGR00817       180 AYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMG-FFHFYQQVAFMLLGRVSPLTHSVGNCMKR  258 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHH-HHHHHHHHHHHHHccCCchHHHHHhhhhh
Confidence            99887777766544333332111110   0    010 011  1111121 33334456667999999999999999999


Q ss_pred             HHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCCCCCC
Q 019344          271 MWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLN  311 (342)
Q Consensus       271 v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~  311 (342)
                      +++++++++++||+++..+++|+++++.|+.++++.+++|+
T Consensus       259 v~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~  299 (302)
T TIGR00817       259 VVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKP  299 (302)
T ss_pred             hheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCc
Confidence            99999999999999999999999999999999998654443

specificities overlap.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.97  E-value=1.9e-27  Score=209.28  Aligned_cols=242  Identities=17%  Similarity=0.067  Sum_probs=192.9

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHH-HHHHHHHhhccchhHHHHhhhhhHHHHHHHHH
Q 019344           48 VDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQG-NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTW  126 (342)
Q Consensus        48 ~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~  126 (342)
                      ..+|....+.|...+.+++.+...++  +.+++++++...|.++... +.+++.|++|+++++++++.+++|+++.+++.
T Consensus        15 ~~~~~~~~~~r~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~   92 (260)
T TIGR00950        15 QVPLYFAVFRRLIFALLLLLPLLRRR--PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSD   92 (260)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHhc--cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHH
Confidence            45677777777777777776665544  4456777788888777666 88999999999999999999999999999999


Q ss_pred             HHhcccchHHHHHHHHHHHhhhhhheecCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhccCChHH--HHHHHH
Q 019344          127 LFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVE--VVCMIG  204 (342)
Q Consensus       127 l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~~~~~~~~~~~~--~~~~~~  204 (342)
                      +++|||+++++++|+.++++|+.++..++.      .+.+..|+.+++.++++|+.+.+..|+..++.++..  ...+.+
T Consensus        93 l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~------~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~  166 (260)
T TIGR00950        93 LMGKERPRKLVLLAAVLGLAGAVLLLSDGN------LSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVL  166 (260)
T ss_pred             HHccCCCcHHHHHHHHHHHHhHHhhccCCc------ccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHH
Confidence            999999999999999999999999875431      245578999999999999999999999887777443  333445


Q ss_pred             HHHHHHHHHHHHhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhccc
Q 019344          205 VYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQK  284 (342)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~  284 (342)
                      ..+.++.. +........ ...+...+....+.+.+ ++..+|.++++++++.++..++...+++|+++.+++++++||+
T Consensus       167 ~~~~~~l~-~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~  243 (260)
T TIGR00950       167 LLGALLLL-PFAWFLGPN-PQALSLQWGALLYLGLI-GTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGET  243 (260)
T ss_pred             HHHHHHHH-HHHHhcCCC-CCcchHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            56655553 333332221 12233333445556665 7778889999999999999999999999999999999999999


Q ss_pred             ccHHHHHHHHHHHHHH
Q 019344          285 VDWLYFLAFGIVVIGL  300 (342)
Q Consensus       285 ~~~~~~~G~~li~~g~  300 (342)
                      +++.++.|.++++.|+
T Consensus       244 ~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       244 LSLPQLIGGALIIAAV  259 (260)
T ss_pred             CCHHHHHHHHHHHHhc
Confidence            9999999999999886

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.96  E-value=1.1e-30  Score=214.62  Aligned_cols=295  Identities=46%  Similarity=0.867  Sum_probs=264.8

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHH
Q 019344           15 VTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQG   94 (342)
Q Consensus        15 ~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   94 (342)
                      ++||+|+|+.+|++++++.+.....++.+++|+.+.|...+|..+...+++..++..+|++..+..|+.++++++...-+
T Consensus        12 ~tkk~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~~~~~~~hYilla~~DVEa   91 (336)
T KOG2766|consen   12 STKKTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRKYIKAKWRHYILLAFVDVEA   91 (336)
T ss_pred             hchhhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhHHHHHHHHHhhheeEEeecc
Confidence            38899999999999999999999999999999999999999999999999999999988888889999999999999999


Q ss_pred             HHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecCCCCCC-CCCCcchHHHHHH
Q 019344           95 NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDG-GGGSRPLLGDVLV  173 (342)
Q Consensus        95 ~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~-~~~~~~~~G~~l~  173 (342)
                      |++...|+||++...+..+.+-....+.+++++|+|.|..+.++.|+++|+.|++++..+|...++ +++.++.+|+.+.
T Consensus        92 Ny~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lv  171 (336)
T KOG2766|consen   92 NYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLV  171 (336)
T ss_pred             cEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEE
Confidence            999999999999999999998888889999999999999999999999999999999998863333 3467889999999


Q ss_pred             HHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 019344          174 IAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFV  253 (342)
Q Consensus       174 l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (342)
                      +++|-+||+.++..+.+.|+.|..+.+...+++|++++.+. ++.+..+.....|.+.... ++.+..++++.|.+.+..
T Consensus       172 i~GATlYaVSNv~EEflvkn~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~~~i~~-yl~f~L~MFllYsl~pil  249 (336)
T KOG2766|consen  172 IAGATLYAVSNVSEEFLVKNADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWDSAIFL-YLRFALTMFLLYSLAPIL  249 (336)
T ss_pred             EecceeeeeccccHHHHHhcCcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEeehHHHHH-HHHHHHHHHHHHHhhHHh
Confidence            99999999999999999999999999999999999999877 6778877777777654444 444667999999999999


Q ss_pred             HhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 019344          254 LKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLNPM  313 (342)
Q Consensus       254 ~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~~  313 (342)
                      ++..+++..++..++.-.++++.  ..||-..+|...+..+.+..|..+|..+++.+++.
T Consensus       250 ~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re~~~~e~  307 (336)
T KOG2766|consen  250 IKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTREKDEEEL  307 (336)
T ss_pred             eecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccccCcHhh
Confidence            99999999999999998999888  66777799999999999999999996655444443

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.96  E-value=7.2e-27  Score=208.89  Aligned_cols=270  Identities=14%  Similarity=0.063  Sum_probs=192.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhh--hh------hHHHHHHHHHH
Q 019344           17 LRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQ--RL------RVAWYWYLLLG   88 (342)
Q Consensus        17 ~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~g   88 (342)
                      +++.+|.++..+.+++++......+..   ...+|.++.++|..++.+++.++...+++  ..      ++++. ....+
T Consensus         4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~---~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   79 (296)
T PRK15430          4 KQTRQGVLLALAAYFIWGIAPAYFKLI---YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIF-MLAVS   79 (296)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHH-HHHHH
Confidence            456678888888888888777666543   24679999999999998766665543221  11      11222 23344


Q ss_pred             HHHHH-HHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecCCCCCCCCCCcch
Q 019344           89 FVDVQ-GNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPL  167 (342)
Q Consensus        89 ~~~~~-~~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~  167 (342)
                      .++.. .+.++++|++++++++++++.++.|+++.+++++++|||+++++++|++++++|+.++..++.       +.  
T Consensus        80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~-------~~--  150 (296)
T PRK15430         80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG-------SL--  150 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC-------Cc--
Confidence            44444 499999999999999999999999999999999999999999999999999999999875431       11  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCCh--HHHHHHHHHHHHHHHHHHHHhhhccccccccc-ch-hHHHHHHHHHHHH
Q 019344          168 LGDVLVIAGTIFFATSNVGEEFFVKKKDR--VEVVCMIGVYGLLVSAVQLSILELKSLESVEW-ST-NILLGFAGYAASS  243 (342)
Q Consensus       168 ~G~~l~l~aa~~~a~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~  243 (342)
                        ..++++++++||.|.+..|+..++...  .....+....+....   ....+.. ....+. .. .....+.... .+
T Consensus       151 --~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~g~-~t  223 (296)
T PRK15430        151 --PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYL---FAIADSS-TSHMGQNPMSLNLLLIAAGI-VT  223 (296)
T ss_pred             --cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH---HHHccCC-cccccCCcHHHHHHHHHHHH-HH
Confidence              146888999999999999986543222  111222222222211   1111111 111111 11 1122222222 56


Q ss_pred             HHHHHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccC
Q 019344          244 FMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTT  306 (342)
Q Consensus       244 ~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  306 (342)
                      ...|.++++++++.++...+...+++|+++.+++++++||++++.+++|+++|+.|+.+...+
T Consensus       224 ~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~  286 (296)
T PRK15430        224 TVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMD  286 (296)
T ss_pred             HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            678899999999999999999999999999999999999999999999999999888777653

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.96  E-value=9.2e-26  Score=205.62  Aligned_cols=249  Identities=16%  Similarity=0.163  Sum_probs=193.2

Q ss_pred             Cc-hHHHHHHHHHHHHHHHHHHHH---Hhhhh---hhHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHH
Q 019344           49 DA-PVTQSAFAYFSLALVYGGVLL---YRRQR---LRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWA  121 (342)
Q Consensus        49 ~~-p~~~~~~r~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~  121 (342)
                      .+ |++++.+|++++.+++..+..   +++++   .+.+++.++..|+++...+...+.|+++++++.++++.+++|+++
T Consensus        75 ~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft  154 (350)
T PTZ00343         75 LPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFT  154 (350)
T ss_pred             CChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHH
Confidence            45 999999999998665443322   11122   245788999999999988777889999999999999999999999


Q ss_pred             HHHHHHHhcccchHHHHHHHHHHHhhhhhheecCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhccC-------
Q 019344          122 IVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKK-------  194 (342)
Q Consensus       122 ~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~~~~~~~~-------  194 (342)
                      ++++++++|||++++++.+++++++|+.+....+.       +.+..|+++++++++++|+++++.|+..++.       
T Consensus       155 ~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~-------~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~  227 (350)
T PTZ00343        155 ALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL-------HFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENL  227 (350)
T ss_pred             HHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc-------hhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccC
Confidence            99999999999999999999999999999886442       3457899999999999999999999988754       


Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhhccccc--------ccccchhHHHHHHHHHHHHHHHHHHHH----HHHhhhhhHHH
Q 019344          195 DRVEVVCMIGVYGLLVSAVQLSILELKSLE--------SVEWSTNILLGFAGYAASSFMFYTLAP----FVLKLSGATMF  262 (342)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~a~~~  262 (342)
                      ++.+...+....+.++.++.....|.....        ...........+ ..+ .+...|.+++    .++++.++...
T Consensus       228 ~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~-~i~-~s~l~~~l~n~~~f~~l~~~s~~t~  305 (350)
T PTZ00343        228 TASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIF-KIF-FSGVWYYLYNEVAFYCLGKVNQVTH  305 (350)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHH-HHH-HHHHHHHHHHHHHHHHHhccchhHH
Confidence            344444444567776664333334432110        111111112222 222 4455566666    59999999999


Q ss_pred             HhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccC
Q 019344          263 NLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTT  306 (342)
Q Consensus       263 ~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  306 (342)
                      ++...++|+++++++++++||++++.+++|+++++.|+++|++.
T Consensus       306 sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        306 AVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             HHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence            99999999999999999999999999999999999999999875

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.94  E-value=2.2e-24  Score=191.61  Aligned_cols=240  Identities=15%  Similarity=0.098  Sum_probs=172.0

Q ss_pred             HHHHHHHHHHHHHHHHHHh-----hhhhhHHHH-HHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHH
Q 019344           55 SAFAYFSLALVYGGVLLYR-----RQRLRVAWY-WYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLF  128 (342)
Q Consensus        55 ~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~g~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~  128 (342)
                      .+++.....+++.++...+     +++.+++++ .....++.....+.+.+.|+++.+++.++++.+++|+++.++++++
T Consensus        31 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~  110 (281)
T TIGR03340        31 LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLT  110 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHH
Confidence            3555556666666665543     122233344 4455555555558899999999999999999999999999999999


Q ss_pred             hcccchHHHHHHHHHHHhhhhhheecCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHH
Q 019344          129 LGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGL  208 (342)
Q Consensus       129 l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~  208 (342)
                      +|||+++++++|+.+++.|+.++..++.  .    ..+..|+.++++++++|+.|.+..|+..++.++.........++.
T Consensus       111 ~~e~~~~~~~~g~~~~~~Gv~ll~~~~~--~----~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~  184 (281)
T TIGR03340       111 LGETLSPLAWLGILIITLGLLVLGLSRF--A----QHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGF  184 (281)
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHHhcccc--c----ccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHH
Confidence            9999999999999999999999876542  1    233468889999999999999998876544443221111112222


Q ss_pred             HHHHHHHHh----hhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhccc
Q 019344          209 LVSAVQLSI----LELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQK  284 (342)
Q Consensus       209 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~  284 (342)
                      +....+...    .+.......++ ......+.+.. .+...|.++++++++.++...+...+++|+++.+++++++||+
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~  262 (281)
T TIGR03340       185 LAMGWPFLLLYLKRHGRSMFPYAR-QILPSATLGGL-MIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNER  262 (281)
T ss_pred             HHHHHHHHHHHHHHhccchhhhHH-HHHHHHHHHHH-HHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCC
Confidence            221111111    11111111111 12233444444 7778899999999999999999999999999999999999999


Q ss_pred             ccHHHHHHHHHHHHHHHh
Q 019344          285 VDWLYFLAFGIVVIGLII  302 (342)
Q Consensus       285 ~~~~~~~G~~li~~g~~l  302 (342)
                      ++..+++|+++++.|+.+
T Consensus       263 ~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       263 WYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             ccHHHHHHHHHHHHhHHh
Confidence            999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.92  E-value=9e-22  Score=175.69  Aligned_cols=278  Identities=22%  Similarity=0.282  Sum_probs=197.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhh-hh--hHHHHHHHHHHHHHHHH-
Q 019344           19 TLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQ-RL--RVAWYWYLLLGFVDVQG-   94 (342)
Q Consensus        19 ~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~g~~~~~~-   94 (342)
                      ...+.....+.++.++......+....+ ..++....+.|.....+...+...+++. ..  +.++++..+.+.+.... 
T Consensus         5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (292)
T COG0697           5 LLLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALP   83 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHH
Confidence            3344444554555554444444443332 2345555555888777664433333221 12  22334455555555555 


Q ss_pred             HHHHHHHhhccchhHHHHhhhhhHHHHHHHHH-HHhcccchHHHHHHHHHHHhhhhhheecCCCCCCCCCCcchHHHHHH
Q 019344           95 NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTW-LFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLV  173 (342)
Q Consensus        95 ~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~-l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~  173 (342)
                      +.+++.++++.+++.++++.++.|+++.+++. +++|||++++++.++.++++|++++..++..+.  . . ...|+.++
T Consensus        84 ~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~--~-~-~~~g~~~~  159 (292)
T COG0697          84 FLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGG--I-L-SLLGLLLA  159 (292)
T ss_pred             HHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcch--h-H-HHHHHHHH
Confidence            89999999999999999999999999999997 667999999999999999999999999874111  0 1 57999999


Q ss_pred             HHHHHHHHHHHHHHHHhhccCChHHHHH-HHHHHHHHHHHHHHHhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHH
Q 019344          174 IAGTIFFATSNVGEEFFVKKKDRVEVVC-MIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPF  252 (342)
Q Consensus       174 l~aa~~~a~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (342)
                      +.+++++|++.+..|+.. +.++..... +... +......+....+..  ....+..+....+.+.. .+...+.++.+
T Consensus       160 l~a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~-~~~i~~~~~~~  234 (292)
T COG0697         160 LAAALLWALYTALVKRLS-RLGPVTLALLLQLL-LALLLLLLFFLSGFG--APILSRAWLLLLYLGVF-STGLAYLLWYY  234 (292)
T ss_pred             HHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHH-HHHHHHHHHHhcccc--ccCCHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence            999999999999999987 656655554 3322 222221122222211  22223334455556665 55577899999


Q ss_pred             HHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccC
Q 019344          253 VLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTT  306 (342)
Q Consensus       253 ~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  306 (342)
                      +.++.++...+...+++|+++.++++++++|+++..+++|+++++.|+.+....
T Consensus       235 ~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         235 ALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999999999999999999999999999999998876

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.91  E-value=7.8e-26  Score=187.28  Aligned_cols=262  Identities=17%  Similarity=0.282  Sum_probs=208.7

Q ss_pred             HHHhcC-CCchHHHHHHHHHHHHHHHHHHHHHhhhhh---hHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhh
Q 019344           42 LIADLG-VDAPVTQSAFAYFSLALVYGGVLLYRRQRL---RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCT  117 (342)
Q Consensus        42 ~~~~~~-~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~ii~~~~  117 (342)
                      .++.|. .++|......|.++-.++..+-.+.+++..   +...++++++|+.+..+..+.|+|++|.+.++++++...+
T Consensus        54 vv~t~~~e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~tgvmlmyya~~~mslaDA~vItFss  133 (346)
T KOG4510|consen   54 VVSTKVLENDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGFTGVMLMYYALMYMSLADAVVITFSS  133 (346)
T ss_pred             HhhhhhhccChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhhhHHHHHHHHHhhcchhheEEEEecC
Confidence            344443 467999998996666666555554444333   3455678999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecCC--CC---C--CCCCCcchHHHHHHHHHHHHHHHHHHHHHHh
Q 019344          118 IAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDA--GG---D--GGGGSRPLLGDVLVIAGTIFFATSNVGEEFF  190 (342)
Q Consensus       118 pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~--~~---~--~~~~~~~~~G~~l~l~aa~~~a~~~v~~~~~  190 (342)
                      |++|.+++++++|||.++.+.++..+.+.||+++..+..  ++   +  ++..+.+..|...++.++++-|--.++.|+.
T Consensus       134 Pvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~i  213 (346)
T KOG4510|consen  134 PVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYI  213 (346)
T ss_pred             hHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHHhHhhhhhHHHHHHHh
Confidence            999999999999999999999999999999999988764  11   1  1122456788999999999999999999999


Q ss_pred             hccCChHHHHHHHHHHHHHHHHHHHHhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhHhhhHH
Q 019344          191 VKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTAD  270 (342)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~p  270 (342)
                      .|+.+......+..+++.+.+++........+.+.-. ..+.....  .++.+++.+.+.+.+++...+...++..+++.
T Consensus       214 Gk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP~cg-kdr~l~~~--lGvfgfigQIllTm~lQiErAGpvaim~~~dv  290 (346)
T KOG4510|consen  214 GKNAHAIMSVSYFSLITLVVSLIGCASIGAVQLPHCG-KDRWLFVN--LGVFGFIGQILLTMGLQIERAGPVAIMTYTDV  290 (346)
T ss_pred             hccccEEEEehHHHHHHHHHHHHHHhhccceecCccc-cceEEEEE--ehhhhhHHHHHHHHHhhhhccCCeehhhHHHH
Confidence            8998888777888888888877665555544444321 11222222  33367788899999999999999999999999


Q ss_pred             HHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccC
Q 019344          271 MWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTT  306 (342)
Q Consensus       271 v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  306 (342)
                      ++++++++++|||.|+++.++|+++++.+.+.....
T Consensus       291 vfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~  326 (346)
T KOG4510|consen  291 VFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALK  326 (346)
T ss_pred             HHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHH
Confidence            999999999999999999999999999887766543

>TIGR00688 rarD rarD protein

Probab=99.91  E-value=2.2e-21  Score=170.17  Aligned_cols=241  Identities=15%  Similarity=0.065  Sum_probs=169.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHH-hh-h----hh----hHH-HHHHHHHHHH
Q 019344           22 LLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLY-RR-Q----RL----RVA-WYWYLLLGFV   90 (342)
Q Consensus        22 ~~~~~~~~al~~~~~~~~~~~~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~-~~-~----~~----~~~-~~~~~~~g~~   90 (342)
                      |+++....+++++..+...+..   ...+|.++.++|..++.+++.++... ++ +    +.    +++ +......|++
T Consensus         3 g~~~~i~a~~~wg~~~~~~k~~---~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         3 GIIVSLLASFLFGYMYYYSKLL---KPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHh---ccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            6677777777777777666652   24789999999999998776665422 11 1    11    112 3346677777


Q ss_pred             HHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecCCCCCCCCCCcchHHH
Q 019344           91 DVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGD  170 (342)
Q Consensus        91 ~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~  170 (342)
                      ....+.++++|++++++++++++.+++|+++++++++++|||++++++++++++++|+.++..++.       +..    
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~-------~~~----  148 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKG-------SLP----  148 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcC-------Cch----
Confidence            777799999999999999999999999999999999999999999999999999999998875431       111    


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhhhccccccccc-chhHHHHHHHHHHHHHHHHHH
Q 019344          171 VLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEW-STNILLGFAGYAASSFMFYTL  249 (342)
Q Consensus       171 ~l~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  249 (342)
                      .++++++++||.|.+..|+..++ +........ ..............+....+..+. ..+..+.+.+.  .+..+|.+
T Consensus       149 ~~~l~aa~~~a~~~i~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~t~i~~~l  224 (256)
T TIGR00688       149 WEALVLAFSFTAYGLIRKALKNT-DLAGFCLET-LSLMPVAIYYLLQTDFATVQQTNPFPIWLLLVLAGL--ITGTPLLA  224 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCC-CcchHHHHH-HHHHHHHHHHHHHhccCcccccCchhHHHHHHHHHH--HHHHHHHH
Confidence            46789999999999999986543 332222111 111112111111111111111111 13344444454  46678999


Q ss_pred             HHHHHhhhhhHHHHhHhhhHHHHHHHHHHHH
Q 019344          250 APFVLKLSGATMFNLSLLTADMWAVVFRICF  280 (342)
Q Consensus       250 ~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~  280 (342)
                      +++++++.++..++...+++|+++++++.+.
T Consensus       225 ~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       225 FVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999874

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.90  E-value=5.7e-21  Score=171.36  Aligned_cols=276  Identities=18%  Similarity=0.244  Sum_probs=214.9

Q ss_pred             HHHHHHHHHhcCCCc--hHHHHHHHHHHHHHHHHHHHHHhh--hhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH
Q 019344           36 MSFTSSLIADLGVDA--PVTQSAFAYFSLALVYGGVLLYRR--QRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVT  111 (342)
Q Consensus        36 ~~~~~~~~~~~~~~~--p~~~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~  111 (342)
                      .+..-..+..+....  |..+++.++....+.........+  ++.+.+++.+...+++......+.+.|++|+|.....
T Consensus        15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~   94 (303)
T PF08449_consen   15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQI   94 (303)
T ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHH
Confidence            333444555554444  999999999888776666554333  3446788999999999999999999999999999999


Q ss_pred             HhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecCCCCCCCCC---CcchHHHHHHHHHHHHHHHHHHHHH
Q 019344          112 LLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGG---SRPLLGDVLVIAGTIFFATSNVGEE  188 (342)
Q Consensus       112 ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~---~~~~~G~~l~l~aa~~~a~~~v~~~  188 (342)
                      +++++.|+++++++.+++|+|.+++++.++++..+|+.+....+..+....+   .....|+.+.+.+.++.|...+.+|
T Consensus        95 ~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe  174 (303)
T PF08449_consen   95 VFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQE  174 (303)
T ss_pred             HHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999988752222111   2234599999999999999999999


Q ss_pred             Hhhcc--CChHHHHHHHHHHHHHHHHHHHHhhh---ccccccc-ccchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHH
Q 019344          189 FFVKK--KDRVEVVCMIGVYGLLVSAVQLSILE---LKSLESV-EWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMF  262 (342)
Q Consensus       189 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  262 (342)
                      +..++  .++.+.+.+.+.++.++..+......   ..+.... ..........+....++..+........++.++...
T Consensus       175 ~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~  254 (303)
T PF08449_consen  175 KLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTT  254 (303)
T ss_pred             HHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhh
Confidence            98876  56677888888888887765544421   1111111 111112222233333555666677778999999999


Q ss_pred             HhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCCCCCC
Q 019344          263 NLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLN  311 (342)
Q Consensus       263 ~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~  311 (342)
                      ++...++.+++++++++++++++++.+++|.++++.|..++.+.++|++
T Consensus       255 t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~  303 (303)
T PF08449_consen  255 TIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN  303 (303)
T ss_pred             hhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence            9999999999999999999999999999999999999999999877653

; GO: 0055085 transmembrane transport

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.89  E-value=4e-20  Score=152.57  Aligned_cols=251  Identities=17%  Similarity=0.065  Sum_probs=199.5

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHhhhhh-hHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHH
Q 019344           48 VDAPVTQSAFAYFSLALVYGGVLLYRRQRL-RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTW  126 (342)
Q Consensus        48 ~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~  126 (342)
                      ...|...+.+|..++.++++.+.+..++++ +++|+.....|......|.++|.+++.+|.+.+..+.++-|+.++.++.
T Consensus        37 ~vG~~g~t~lRl~~aaLIll~l~RPwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~s  116 (292)
T COG5006          37 LVGAAGVTALRLAIAALILLALFRPWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLSS  116 (292)
T ss_pred             ccChhhHHHHHHHHHHHHHHHHhhHHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHhc
Confidence            456899999999999999999888655555 8899999999999999999999999999999999999999998877665


Q ss_pred             HHhcccchHHHHHHHHHHHhhhhhheecCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHH
Q 019344          127 LFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVY  206 (342)
Q Consensus       127 l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~  206 (342)
                      -      +.++.+.+.+++.|+.++.-...    +.+..+..|..+++.++.+|+.|.+..||..+..+.......-+.+
T Consensus       117 R------r~~d~vwvaLAvlGi~lL~p~~~----~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~a~gm~v  186 (292)
T COG5006         117 R------RLRDFVWVALAVLGIWLLLPLGQ----SVWSLDPVGVALALGAGACWALYIVLGQRAGRAEHGTAGVAVGMLV  186 (292)
T ss_pred             c------chhhHHHHHHHHHHHHhheeccC----CcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCCCchHHHHHHHH
Confidence            3      45677778888899988876552    1336779999999999999999999999987655555555555566


Q ss_pred             HHHHHHHHHHhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhccccc
Q 019344          207 GLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVD  286 (342)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~  286 (342)
                      +.++.+ |+-..... ..-+++......+.+++. ++..-|.+=..++++.+....+....+||.++.+.+++++||.+|
T Consensus       187 Aaviv~-Pig~~~ag-~~l~~p~ll~laLgvavl-SSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls  263 (292)
T COG5006         187 AALIVL-PIGAAQAG-PALFSPSLLPLALGVAVL-SSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLT  263 (292)
T ss_pred             HHHHHh-hhhhhhcc-hhhcChHHHHHHHHHHHH-hcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCC
Confidence            666653 44332211 111223322333445555 888999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhccCCCCCC
Q 019344          287 WLYFLAFGIVVIGLIIYSTTEKDLN  311 (342)
Q Consensus       287 ~~~~~G~~li~~g~~l~~~~~~~~~  311 (342)
                      +.|+.|++.|+.+..-.+...+|+.
T Consensus       264 ~~qwlaI~~ViaAsaG~~lt~~~~~  288 (292)
T COG5006         264 LIQWLAIAAVIAASAGSTLTARKPA  288 (292)
T ss_pred             HHHHHHHHHHHHHHhccccccCCCC
Confidence            9999999999999886666555443

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.86  E-value=9.6e-20  Score=158.45  Aligned_cols=295  Identities=21%  Similarity=0.239  Sum_probs=218.6

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CchHHHHHHHHHHHHHHHHHHHH---------Hh--hh--------
Q 019344           16 TLRTLYLLFLGQLVSFTLALMSFTSSLIADLGV-DAPVTQSAFAYFSLALVYGGVLL---------YR--RQ--------   75 (342)
Q Consensus        16 ~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~-~~p~~~~~~r~~~~~~~~~~~~~---------~~--~~--------   75 (342)
                      +.|...|+++-.++.++|...+-..+.++.... ..|++.++..-....+.+.++..         +|  +.        
T Consensus         9 ~~r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e~   88 (416)
T KOG2765|consen    9 RWRWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEEA   88 (416)
T ss_pred             hhHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhhh
Confidence            456777887777777888888888888877543 46888876665444444443221         00  00        


Q ss_pred             -----------------------------------------------------hhh------------HHHHHHHHHHHH
Q 019344           76 -----------------------------------------------------RLR------------VAWYWYLLLGFV   90 (342)
Q Consensus        76 -----------------------------------------------------~~~------------~~~~~~~~~g~~   90 (342)
                                                                           +.|            +..+..+..+.+
T Consensus        89 d~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~l  168 (416)
T KOG2765|consen   89 DAEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCPL  168 (416)
T ss_pred             hhhccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHHH
Confidence                                                                 001            123455777888


Q ss_pred             HHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecCC-CCCCCCCCcchHH
Q 019344           91 DVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDA-GGDGGGGSRPLLG  169 (342)
Q Consensus        91 ~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~-~~~~~~~~~~~~G  169 (342)
                      .+..+++++.|+++++++..+++.+++.+||..++.++.+||+++.+.+++.+.+.|++++..++. ++++........|
T Consensus       169 WF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~llG  248 (416)
T KOG2765|consen  169 WFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPLLG  248 (416)
T ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccchhHH
Confidence            888899999999999999999999999999999999999999999999999999999999999875 2233345566999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccC-ChHHHHHHHH---HHHHHHHHHHHHhhhccccccccc--chhH-HHHHHHHHHH
Q 019344          170 DVLVIAGTIFFATSNVGEEFFVKKK-DRVEVVCMIG---VYGLLVSAVQLSILELKSLESVEW--STNI-LLGFAGYAAS  242 (342)
Q Consensus       170 ~~l~l~aa~~~a~~~v~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~  242 (342)
                      .++++++|+.||+|.++.||...+. ....+..+.+   ++..++..+++.+.+....+..+.  .... .+.+.+.. .
T Consensus       249 ~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~li-g  327 (416)
T KOG2765|consen  249 NLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFNNLI-G  327 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHhhHH-H
Confidence            9999999999999999999988776 3555444444   444444443444443322222221  1122 23333433 6


Q ss_pred             HHHHHHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCCCCCC
Q 019344          243 SFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLN  311 (342)
Q Consensus       243 ~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~  311 (342)
                      ++..-.+|.++.-..++.++.+.+.++...+++.+.++-+..+++.+++|.+.|++|.++.++..+...
T Consensus       328 tvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~~~~  396 (416)
T KOG2765|consen  328 TVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSENSK  396 (416)
T ss_pred             HHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccccccc
Confidence            777778888899999999999988888899999999999999999999999999999999998664443

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.86  E-value=2.1e-18  Score=146.38  Aligned_cols=275  Identities=13%  Similarity=0.057  Sum_probs=201.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHH--Hhhhhh------hHHHHHHHHHH
Q 019344           17 LRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLL--YRRQRL------RVAWYWYLLLG   88 (342)
Q Consensus        17 ~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~p~~~~~~r~~~~~~~~~~~~~--~~~~~~------~~~~~~~~~~g   88 (342)
                      |+..+|++++..+.++++..-...+.+.   ..++.++...|...+..++.....  ++++..      ++.+..+.+.+
T Consensus         3 ~~~~~Gil~~l~Ay~lwG~lp~y~kll~---~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a   79 (293)
T COG2962           3 KDSRKGILLALLAYLLWGLLPLYFKLLE---PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTA   79 (293)
T ss_pred             CcccchhHHHHHHHHHHHHHHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHH
Confidence            4566799999888888777766655543   356777887777666555444332  333322      22444555666


Q ss_pred             HHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecCCCCCCCCCCcchH
Q 019344           89 FVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLL  168 (342)
Q Consensus        89 ~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~  168 (342)
                      .+.......+.+|.++..+-+++.-++.+|++.++++++|+|||+++.|++++.++.+||........       +.+  
T Consensus        80 ~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g-------~lp--  150 (293)
T COG2962          80 LLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG-------SLP--  150 (293)
T ss_pred             HHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC-------CCc--
Confidence            66666678899999999999999999999999999999999999999999999999999999988763       222  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhhhcccccccccchhHHHHHHHHHHHHHHHHH
Q 019344          169 GDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYT  248 (342)
Q Consensus       169 G~~l~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (342)
                        ..++.-|++|+.|..+-|+  -+.|+.+-......+-...+++.....+.+.......+.....++...+..+.....
T Consensus       151 --wval~la~sf~~Ygl~RK~--~~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vTavpL~  226 (293)
T COG2962         151 --WVALALALSFGLYGLLRKK--LKVDALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVTAVPLL  226 (293)
T ss_pred             --HHHHHHHHHHHHHHHHHHh--cCCchHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHHHHHHH
Confidence              4566778899999887665  355666655555555555543333222322210111222233333344446667778


Q ss_pred             HHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCC
Q 019344          249 LAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTE  307 (342)
Q Consensus       249 ~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  307 (342)
                      ++..+.++.+-...++..|.+|..-.+++++++||+++..++...++|.+|+.++..+.
T Consensus       227 lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~  285 (293)
T COG2962         227 LFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDG  285 (293)
T ss_pred             HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            88999999999999999999999999999999999999999999999999999998754

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.86  E-value=8.1e-19  Score=156.03  Aligned_cols=270  Identities=13%  Similarity=0.058  Sum_probs=187.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHH-HHHhhhh--hhHHHHHHHHHHHHHHHHHHHHH
Q 019344           23 LFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGV-LLYRRQR--LRVAWYWYLLLGFVDVQGNFLVN   99 (342)
Q Consensus        23 ~~~~~~~al~~~~~~~~~~~~~~~~~~~p~~~~~~r~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~   99 (342)
                      +++..+.+++++..+...+.+.   ..++.+..  |..++.+++..+ ...+.++  .++.+..-++.|+....++.+++
T Consensus         3 ~l~~lia~~~wGs~g~~~k~~~---g~~~~~~~--~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~l~G~~w~ig~~~~~   77 (290)
T TIGR00776         3 ILIALIPALFWGSFVLINVKIG---GGPYSQTL--GTTFGALILSIAIAIFVLPEFWALSIFLVGLLSGAFWALGQINQF   77 (290)
T ss_pred             hHHHHHHHHHHhhhHHHHhccC---CCHHHHHH--HHHHHHHHHHHHHHHHhCCcccccHHHHHHHHHHHHHHhhhhhHH
Confidence            4455555555555555554433   23333333  555554443332 2222212  13444555666777777799999


Q ss_pred             HHhhccchhHHHHhhh-hhHHHHHHHHHHHhcccchHHH----HHHHHHHHhhhhhheecCCCCCCCCC-CcchHHHHHH
Q 019344          100 KAYQFSSITSVTLLDC-CTIAWAIVLTWLFLGTRYSLWQ----LLGAALCVLGLGLVLLSDAGGDGGGG-SRPLLGDVLV  173 (342)
Q Consensus       100 ~al~~~~~~~~~ii~~-~~pi~~~il~~l~l~e~~~~~~----~~g~~l~~~Gv~l~~~~~~~~~~~~~-~~~~~G~~l~  173 (342)
                      .|.++.+++.+..+.+ +++++..+.+.+++|||.++++    .+|++++++|++++...+.++.++.+ .+...|+.++
T Consensus        78 ~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~  157 (290)
T TIGR00776        78 KSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLL  157 (290)
T ss_pred             HHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHH
Confidence            9999999999998887 9999999999999999999999    99999999999998776531111111 2337899999


Q ss_pred             HHHHHHHHHHHHHHHHhhccCChHHHHHHHHH---HHHHHHHHHHHhhhcccccccccchhHHHHHHHHHHHHHHHHHHH
Q 019344          174 IAGTIFFATSNVGEEFFVKKKDRVEVVCMIGV---YGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLA  250 (342)
Q Consensus       174 l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (342)
                      +.++++|+.|.+..|+.  +.+|.+..+.+..   .+..+...+.   .. . ++............|..  ...+|.++
T Consensus       158 l~sg~~y~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~---~~-~-~~~~~~~~~~~~~~Gi~--~~ia~~~y  228 (290)
T TIGR00776       158 LMSTIGYLVYVVVAKAF--GVDGLSVLLPQAIGMVIGGIIFNLGH---IL-A-KPLKKYAILLNILPGLM--WGIGNFFY  228 (290)
T ss_pred             HHHHHHHHHHHHHHHHc--CCCcceehhHHHHHHHHHHHHHHHHH---hc-c-cchHHHHHHHHHHHHHH--HHHHHHHH
Confidence            99999999999999975  4777777555532   2222221111   10 0 11111111122224443  57778888


Q ss_pred             HHHHh-hhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHH----HHHHHHHHHHHhhccC
Q 019344          251 PFVLK-LSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYF----LAFGIVVIGLIIYSTT  306 (342)
Q Consensus       251 ~~~~~-~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~----~G~~li~~g~~l~~~~  306 (342)
                      ..+.+ +.++...+...+.||+.+.+++++++||..++.|+    +|+++++.|+.+....
T Consensus       229 ~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~  289 (290)
T TIGR00776       229 LFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIG  289 (290)
T ss_pred             HHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhcc
Confidence            88999 99999999999999999999999999999999999    9999999999887543

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.79  E-value=5.5e-19  Score=155.31  Aligned_cols=258  Identities=16%  Similarity=0.267  Sum_probs=209.5

Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHh---hhh--hhHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHH
Q 019344           47 GVDAPVTQSAFAYFSLALVYGGVLLYR---RQR--LRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWA  121 (342)
Q Consensus        47 ~~~~p~~~~~~r~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~  121 (342)
                      +...|.+++..+...+.+..+.....+   +++  .+..++..+.+|+...++.++.+.|+.+.+++.++.+..++|+++
T Consensus        44 ~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~t  123 (316)
T KOG1441|consen   44 GFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFT  123 (316)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhH
Confidence            455699999886666655444333222   122  246889999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcccchHHHHHHHHHHHhhhhhheecCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhc----cCChH
Q 019344          122 IVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVK----KKDRV  197 (342)
Q Consensus       122 ~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~~~~~~----~~~~~  197 (342)
                      +++++++.+|+.++..+..+.....||.+....+.       +.++.|...++++.+..+..+++.|+..+    +.|+.
T Consensus       124 vl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~-------~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~  196 (316)
T KOG1441|consen  124 VLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTEL-------SFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSM  196 (316)
T ss_pred             HHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccc-------cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCch
Confidence            99999999999999999999999999999999773       78899999999999999999999999884    26788


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhc-ccc---cccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhHhhhHHHHH
Q 019344          198 EVVCMIGVYGLLVSAVQLSILEL-KSL---ESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWA  273 (342)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~  273 (342)
                      +...++.-++..+.++|+..... ...   ....|+.......... .+.+..+...+..+.+.+|...++.+...-++.
T Consensus       197 ~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~v  275 (316)
T KOG1441|consen  197 NLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVV  275 (316)
T ss_pred             HHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEE
Confidence            88888877777777646544432 222   1113333333322223 477788888899999999999999999999999


Q ss_pred             HHHHHHHhcccccHHHHHHHHHHHHHHHhhccCCCCCCC
Q 019344          274 VVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLNP  312 (342)
Q Consensus       274 ~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~  312 (342)
                      ++.++++|+|+.++.+..|+++.++|+++|++.+.++++
T Consensus       276 i~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~  314 (316)
T KOG1441|consen  276 IVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK  314 (316)
T ss_pred             EEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence            999999999999999999999999999999998766544

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.78  E-value=7.3e-15  Score=128.45  Aligned_cols=280  Identities=15%  Similarity=0.145  Sum_probs=197.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcC--CCchHHHHHHHHHHHHHHHHHHHHHh-----hhhh----------hHHHHHHHHHH
Q 019344           26 GQLVSFTLALMSFTSSLIADLG--VDAPVTQSAFAYFSLALVYGGVLLYR-----RQRL----------RVAWYWYLLLG   88 (342)
Q Consensus        26 ~~~~al~~~~~~~~~~~~~~~~--~~~p~~~~~~r~~~~~~~~~~~~~~~-----~~~~----------~~~~~~~~~~g   88 (342)
                      ..+.....++.....+.....+  ...|...++.--.+-.+++...++++     ++..          +++..+..+.+
T Consensus        20 l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa   99 (345)
T KOG2234|consen   20 LIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPA   99 (345)
T ss_pred             HHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHH
Confidence            3334444555554554443332  23477777666666666655555433     1111          22456777788


Q ss_pred             HHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecCCC--CC--CCCCC
Q 019344           89 FVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAG--GD--GGGGS  164 (342)
Q Consensus        89 ~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~--~~--~~~~~  164 (342)
                      ++....|.+.|.++.+.+++..++..++..+.|++++++++++|++++||.++++.++|+.++-.+...  +.  .....
T Consensus       100 ~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~  179 (345)
T KOG2234|consen  100 LIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQ  179 (345)
T ss_pred             HHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCccc
Confidence            888888779999999999999999999999999999999999999999999999999999999844321  11  23456


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHhhccCC--hHHHHHHHHHHHHHHHHHHHHhhhcccccc--c--ccchhHHHHHHH
Q 019344          165 RPLLGDVLVIAGTIFFATSNVGEEFFVKKKD--RVEVVCMIGVYGLLVSAVQLSILELKSLES--V--EWSTNILLGFAG  238 (342)
Q Consensus       165 ~~~~G~~l~l~aa~~~a~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~  238 (342)
                      +...|....+.++...++..++.+|..|+.+  ...-+...+++|.++.++.....+......  +  .|++..+...+.
T Consensus       180 n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~vVl~  259 (345)
T KOG2234|consen  180 NPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWLVVLL  259 (345)
T ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHHHHHHH
Confidence            7799999999999999999999999997743  333445556888888875555555433321  1  122222222222


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCCCC
Q 019344          239 YAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKD  309 (342)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~  309 (342)
                         ...++ .+....+++.+...=.....+..+++.+.++.+++.+||....+|..+++.++.+|...+.+
T Consensus       260 ---~a~gG-Llvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~  326 (345)
T KOG2234|consen  260 ---NAVGG-LLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPAR  326 (345)
T ss_pred             ---Hhccc-hhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCcc
Confidence               22222 44455666666666666666677999999999999999999999999999999999955443

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.74  E-value=1.5e-15  Score=129.23  Aligned_cols=260  Identities=17%  Similarity=0.225  Sum_probs=208.6

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHhhh--hhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHH
Q 019344           48 VDAPVTQSAFAYFSLALVYGGVLLYRRQ--RLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLT  125 (342)
Q Consensus        48 ~~~p~~~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~il~  125 (342)
                      ..+|.++.+.+++.+.++-..++..+++  ..+.+|+.+...++.+.....+.|.|++|++-....+-.++..+-+++++
T Consensus        48 F~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg  127 (327)
T KOG1581|consen   48 FEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMG  127 (327)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHH
Confidence            3568899999999887776555433222  23779999999999999999999999999999999999999999999999


Q ss_pred             HHHhcccchHHHHHHHHHHHhhhhhheecCCCC--CCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhcc--CChHHHHH
Q 019344          126 WLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGG--DGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKK--KDRVEVVC  201 (342)
Q Consensus       126 ~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~--~~~~~~~~~~G~~l~l~aa~~~a~~~v~~~~~~~~--~~~~~~~~  201 (342)
                      .+++|+|.+..+++...+..+|+.+....+.++  .+....+..+|+.+....-++-++.+..++++.++  .++..++.
T Consensus       128 ~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~  207 (327)
T KOG1581|consen  128 TLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMF  207 (327)
T ss_pred             HHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHH
Confidence            999999999999999999999999988875422  22344577999999999999999999999999886  56788888


Q ss_pred             HHHHHHHHHHHHHHHhhhcccccccc-----cchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhHhhhHHHHHHHH
Q 019344          202 MIGVYGLLVSAVQLSILELKSLESVE-----WSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVF  276 (342)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~  276 (342)
                      +..+++.+...... +..+...++.+     ......++...  .++..++.+.+.-+++.|+.+...++.++.++++.+
T Consensus       208 ~vNLf~~i~~~~~l-i~qg~~~~av~F~~~hp~~~~Di~l~s--~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~l  284 (327)
T KOG1581|consen  208 GVNLFSAILNGTYL-ILQGHLLPAVSFIKEHPDVAFDILLYS--TCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIML  284 (327)
T ss_pred             HHHHHHHHHHHHhh-hcCCCCchHHHHHHcChhHHHHHHHHH--HhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHH
Confidence            88888888875432 22222112211     11122233322  355666788888899999999999999999999999


Q ss_pred             HHHHhcccccHHHHHHHHHHHHHHHhhccCCCCC
Q 019344          277 RICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDL  310 (342)
Q Consensus       277 ~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~  310 (342)
                      +.+.+|++.++.|+.|..++..|+.+-..-++|+
T Consensus       285 S~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~~  318 (327)
T KOG1581|consen  285 SCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKKK  318 (327)
T ss_pred             HHHHhCCccchhhccCeeeehHHHHHHHHHHHhc
Confidence            9999999999999999999999998877766553

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.73  E-value=3.4e-15  Score=128.64  Aligned_cols=218  Identities=17%  Similarity=0.180  Sum_probs=166.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecCCC
Q 019344           78 RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAG  157 (342)
Q Consensus        78 ~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~  157 (342)
                      +++..++.+.+++....+.+.+.++++.+++..+++.++..++|++++++++|+|++++||+++.+.++|+.++..++..
T Consensus        14 ~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   14 PKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            45677889999999999999999999999999999999999999999999999999999999999999999998876642


Q ss_pred             CC---CC-------CCCcchHHHHHHHHHHHHHHHHHHHHHHhhccCC--hHHHHHHHHHHHHHHHHHHHHhhhcccccc
Q 019344          158 GD---GG-------GGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKD--RVEVVCMIGVYGLLVSAVQLSILELKSLES  225 (342)
Q Consensus       158 ~~---~~-------~~~~~~~G~~l~l~aa~~~a~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (342)
                      ..   ++       ...+...|.++.+.++++.++..++.+|..|+.+  ...-+...+.++.++.++.....++....+
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~  173 (244)
T PF04142_consen   94 SSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISE  173 (244)
T ss_pred             ccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence            21   11       1234579999999999999999999999999853  344455556788887765544444332221


Q ss_pred             cc-cchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHH
Q 019344          226 VE-WSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIV  296 (342)
Q Consensus       226 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li  296 (342)
                      .. +.+.-...+..+.....++ ......+++.+...=+.......+++.+.++++|+.+++....+|..++
T Consensus       174 ~g~f~G~~~~~~~~i~~~a~gG-llva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  174 SGFFHGYSWWVWIVIFLQAIGG-LLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV  244 (244)
T ss_pred             CCchhhcchHHHHHHHHHHHhh-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence            11 1111111222222122222 5566678888888888888888899999999999999999999998753

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.67  E-value=2.5e-14  Score=121.65  Aligned_cols=268  Identities=10%  Similarity=0.127  Sum_probs=189.5

Q ss_pred             HHHHHHHHHHHHHHhc---CCCchHHHHHHHHHHHHHHHHHHHH-Hhhhhh--------hHHHHHHHHHHHHHHHHHHHH
Q 019344           31 FTLALMSFTSSLIADL---GVDAPVTQSAFAYFSLALVYGGVLL-YRRQRL--------RVAWYWYLLLGFVDVQGNFLV   98 (342)
Q Consensus        31 l~~~~~~~~~~~~~~~---~~~~p~~~~~~r~~~~~~~~~~~~~-~~~~~~--------~~~~~~~~~~g~~~~~~~~~~   98 (342)
                      +.+-..+.+.++..++   ...-|.+++.++.++-.++.....+ ++++..        +...++....|+.......+.
T Consensus        22 l~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLS  101 (349)
T KOG1443|consen   22 LLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLS  101 (349)
T ss_pred             HHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccc
Confidence            3344444444555543   3445999998887766554433222 221111        335566779999988889999


Q ss_pred             HHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecCCCCCCCCCCcchHHHHHHHHHHH
Q 019344           99 NKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTI  178 (342)
Q Consensus        99 ~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~aa~  178 (342)
                      +++++|++.+..++..+.+++|+.+++.+|.-||.++.-..-++++.+|+.+.++.+.       +.+..|..+..++.+
T Consensus       102 N~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT-------qf~i~Gf~lv~~aS~  174 (349)
T KOG1443|consen  102 NWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST-------QFNIEGFFLVLAASL  174 (349)
T ss_pred             cceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc-------ceeehhHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999874       678899999999999


Q ss_pred             HHHHHHHHHHHhhcc-----CChHHHHHHHHHHHHHHHHHHHHhhhcccccc-------cccch--hHHHHHHHHHHHHH
Q 019344          179 FFATSNVGEEFFVKK-----KDRVEVVCMIGVYGLLVSAVQLSILELKSLES-------VEWST--NILLGFAGYAASSF  244 (342)
Q Consensus       179 ~~a~~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~--~~~~~~~~~~~~~~  244 (342)
                      +.++-..+.+...++     .+|........-+..+..++....+|+.....       .+...  +....+...+...+
T Consensus       175 ~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~laF  254 (349)
T KOG1443|consen  175 LSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGLLAF  254 (349)
T ss_pred             hhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHHHHH
Confidence            999888888887766     34666665555444444444455666533221       11111  11111111111222


Q ss_pred             HHHHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhcc
Q 019344          245 MFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYST  305 (342)
Q Consensus       245 ~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  305 (342)
                      +--..=.....+++....++.....-+...+++.++.+|.++...+.|..+...|+.++..
T Consensus       255 ~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~  315 (349)
T KOG1443|consen  255 LLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN  315 (349)
T ss_pred             HHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence            2212223355667778888888888899999999999999999999999999999999944

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.66  E-value=6.5e-14  Score=117.60  Aligned_cols=259  Identities=23%  Similarity=0.282  Sum_probs=190.1

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHhhhh------------h-----hHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH
Q 019344           48 VDAPVTQSAFAYFSLALVYGGVLLYRRQR------------L-----RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSV  110 (342)
Q Consensus        48 ~~~p~~~~~~r~~~~~~~~~~~~~~~~~~------------~-----~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~  110 (342)
                      ..+|+..+...++.-+.+++.+.+.|++.            .     +-+...++.-+++-..+..+.|.++.+++++..
T Consensus        36 fqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal~Di~gsslm~vgL~lTsASsf  115 (372)
T KOG3912|consen   36 FQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPALCDIAGSSLMYVGLNLTSASSF  115 (372)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecChHHHHHhhhHHHHHHHHHhhHHHH
Confidence            56699988877777777776666543321            0     112345566888999999999999999999999


Q ss_pred             HHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecCCC---CCCCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 019344          111 TLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAG---GDGGGGSRPLLGDVLVIAGTIFFATSNVGE  187 (342)
Q Consensus       111 ~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~---~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~  187 (342)
                      +++.....+|+.+++.-+++++++.+||+|+....+|++.+...|..   +.-.+.+....|+++.++|-+.-|...++.
T Consensus       116 QMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~iitGdllIiiaqiivaiQ~v~E  195 (372)
T KOG3912|consen  116 QMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSIITGDLLIIIAQIIVAIQMVCE  195 (372)
T ss_pred             HHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccchhhhHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999887641   122233566899999999999999999999


Q ss_pred             HHhhcc--CChHHHHHHHHHHHHHHHHHHHHhhh----cccc---ccc---ccc---------hhHHHHHHHHHHHHHHH
Q 019344          188 EFFVKK--KDRVEVVCMIGVYGLLVSAVQLSILE----LKSL---ESV---EWS---------TNILLGFAGYAASSFMF  246 (342)
Q Consensus       188 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---~~~---~~~---------~~~~~~~~~~~~~~~~~  246 (342)
                      +|..++  .+|.....+.+.+|.++..+......    +..+   +.-   +|.         ....+...+...+-..+
T Consensus       196 ek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAff  275 (372)
T KOG3912|consen  196 EKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFF  275 (372)
T ss_pred             HhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeee
Confidence            998877  67888899999888665433222221    1000   000   111         11222333333222222


Q ss_pred             HHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccC
Q 019344          247 YTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTT  306 (342)
Q Consensus       247 ~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  306 (342)
                      +..-....+..+++.-.+...++..+-.+++.....|.+...|+.|..+.+.|+.+|+--
T Consensus       276 NfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~~i  335 (372)
T KOG3912|consen  276 NFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYNQI  335 (372)
T ss_pred             eehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            222233455567777777888888999999999999999999999999999999999843

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.64  E-value=1.7e-14  Score=118.11  Aligned_cols=233  Identities=12%  Similarity=0.110  Sum_probs=180.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecCCC
Q 019344           78 RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAG  157 (342)
Q Consensus        78 ~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~  157 (342)
                      +.+-+.+..++......++..+.|++|.|-....+-.++.|+-+.++++++.+++.+|+++..++++++||.+..+.+..
T Consensus        82 ~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~K  161 (337)
T KOG1580|consen   82 NTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENK  161 (337)
T ss_pred             CCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccc
Confidence            44567788888887777999999999999999999999999999999999999999999999999999999999998653


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhccC--ChHHHHHHHHHHHHHHHHHHHHhh-hccccccccc-chhHH
Q 019344          158 GDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKK--DRVEVVCMIGVYGLLVSAVQLSIL-ELKSLESVEW-STNIL  233 (342)
Q Consensus       158 ~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~  233 (342)
                      .+...+.....|.++.+.+-..-+.....+++..+..  ....++.+..+++.+.....+.+. +..++..+.. ....+
T Consensus       162 v~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~  241 (337)
T KOG1580|consen  162 VGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVF  241 (337)
T ss_pred             cCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHH
Confidence            3333456678999999999999999999988875542  335566667777777654333222 1111111110 01111


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCCCCC
Q 019344          234 LGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDL  310 (342)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~  310 (342)
                      .-+..+.+++.+++++.+......++..-++...+...|+++.++++|+++++..||+|.+++..|...-....+|.
T Consensus       242 ~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK~a  318 (337)
T KOG1580|consen  242 WDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGKKA  318 (337)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCCcC
Confidence            12233444777788888999999999999999999999999999999999999999999999999988766554433

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.57  E-value=1.7e-12  Score=112.11  Aligned_cols=258  Identities=15%  Similarity=0.091  Sum_probs=189.5

Q ss_pred             CCchHHHHH--HHHHHHHHHHHHHHHHh---hhhh-hHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHH
Q 019344           48 VDAPVTQSA--FAYFSLALVYGGVLLYR---RQRL-RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWA  121 (342)
Q Consensus        48 ~~~p~~~~~--~r~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~  121 (342)
                      ...|..+..  .+.+...+.+...-+-+   -+++ ++..++.+...++..+..+....+++|.++...+++.+.+|+++
T Consensus        38 y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~  117 (314)
T KOG1444|consen   38 YNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILT  117 (314)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHccccccccCchHHHHHhhchHHHH
Confidence            344555444  77776655444332211   1222 56678889999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcccchHHHHHHHHHHHhhhhhheecCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhccC--ChHHH
Q 019344          122 IVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKK--DRVEV  199 (342)
Q Consensus       122 ~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~~~~~~~~--~~~~~  199 (342)
                      ++....++|.|++...+.++..+++|.......+.       ..+..|..|++...++.+.+.+..|+..+..  +....
T Consensus       118 ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~-------sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~l  190 (314)
T KOG1444|consen  118 AIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDL-------SFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGL  190 (314)
T ss_pred             HHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccc-------eecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeE
Confidence            99999999999999999999999999999888874       4556699999999999999999999987664  34555


Q ss_pred             HHHHHHHHHHHHHHHHHhhhccc---ccccccch-hHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhHhhhHHHHHHH
Q 019344          200 VCMIGVYGLLVSAVQLSILELKS---LESVEWST-NILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVV  275 (342)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~  275 (342)
                      ..+-.+.......+..++.++.+   .+...|.. .........++.+++......+..+..++...++........+.+
T Consensus       191 v~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l  270 (314)
T KOG1444|consen  191 VFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYL  270 (314)
T ss_pred             EeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHH
Confidence            56666666666544444444321   11111221 112222222335555556666788888999888888777677777


Q ss_pred             HHHHHhcccccHHHHHHHHHHHHHHHhhccCCCCCCC
Q 019344          276 FRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLNP  312 (342)
Q Consensus       276 ~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~  312 (342)
                      -..++.+++.++...+|..+-+.|-++|++.+.++++
T Consensus       271 ~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~  307 (314)
T KOG1444|consen  271 GGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKK  307 (314)
T ss_pred             HHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhcc
Confidence            7777778899999999999999999999998755443

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.54  E-value=6.3e-13  Score=111.22  Aligned_cols=256  Identities=14%  Similarity=0.176  Sum_probs=198.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHH-HhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHh
Q 019344           51 PVTQSAFAYFSLALVYGGVLL-YRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFL  129 (342)
Q Consensus        51 p~~~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l  129 (342)
                      -|.+++.++.+-..+.+..+. .+.++...+|+.+..++.+....+-+.+.++.|.+-....++.++.-+-+.+.+.++-
T Consensus        75 GWylTlvQf~~Ysg~glie~~~~~~k~r~iP~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIq  154 (367)
T KOG1582|consen   75 GWYLTLVQFLVYSGFGLIELQLIQTKRRVIPWRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQ  154 (367)
T ss_pred             chHHHHHHHHHHHhhhheEEEeecccceecchhHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeec
Confidence            578888888776544433332 2334445689999999999998899999999999998888999999999999999999


Q ss_pred             cccchHHHHHHHHHHHhhhhhheecCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhcc--CChHHHHHHHHHHH
Q 019344          130 GTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKK--KDRVEVVCMIGVYG  207 (342)
Q Consensus       130 ~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~~~~~~~--~~~~~~~~~~~~~~  207 (342)
                      ++|..+.++.+..+..+|.++.+..|.   ....+.+.+|+.+.-+|-++-|+-..++++..+.  .+..++.++.+.+|
T Consensus       155 GkRY~v~d~~aA~lm~lGli~FTLADs---~~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG  231 (367)
T KOG1582|consen  155 GKRYGVHDYIAAMLMSLGLIWFTLADS---QTSPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIG  231 (367)
T ss_pred             cccccHHHHHHHHHHHHHHHhhhhccc---ccCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeeccc
Confidence            999999999999999999999999884   2344677899999999999999999999998876  44566777788888


Q ss_pred             HHHHHHHHHhhhcccccccc----cchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcc
Q 019344          208 LLVSAVQLSILELKSLESVE----WSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQ  283 (342)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e  283 (342)
                      .++.+.+..+.+. -++.++    .+.......+.....++.+.......++..++..+......+.-.++++++++|..
T Consensus       232 ~vflf~~mvlTge-~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsK  310 (367)
T KOG1582|consen  232 FVFLFAPMVLTGE-LFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSK  310 (367)
T ss_pred             HHHHHHHHHhccc-chhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcC
Confidence            8887666554432 112111    11111222222222455555555667788899999988889999999999999999


Q ss_pred             cccHHHHHHHHHHHHHHHhhccCCCCC
Q 019344          284 KVDWLYFLAFGIVVIGLIIYSTTEKDL  310 (342)
Q Consensus       284 ~~~~~~~~G~~li~~g~~l~~~~~~~~  310 (342)
                      ++|.....|..+++.|+++-.+.++.+
T Consensus       311 PfT~qy~~~gllv~lgI~Ln~ysk~nk  337 (367)
T KOG1582|consen  311 PFTEQYVWSGLLVVLGIYLNMYSKRNK  337 (367)
T ss_pred             chHHHHhhhhHHHHHHHHhhcccCCCC
Confidence            999999999999999999988877443

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.52  E-value=4.6e-13  Score=108.92  Aligned_cols=265  Identities=13%  Similarity=0.084  Sum_probs=199.3

Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHhhhhh-hHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHH
Q 019344           47 GVDAPVTQSAFAYFSLALVYGGVLLYRRQRL-RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLT  125 (342)
Q Consensus        47 ~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~il~  125 (342)
                      +.+-.+.+.+.+.+...+.+...-+.+-.+. .++.++.+..+++.....+..-.+++|.++...+++.+++.+..+...
T Consensus        33 gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygE  112 (309)
T COG5070          33 GFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLTKAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGE  112 (309)
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHhHhheehhhhhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhH
Confidence            4455677777777766554443332222222 456677788899999888899999999999999999999999999999


Q ss_pred             HHHhcccchHHHHHHHHHHHhhhhhheecCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhccCCh--HHHHHHH
Q 019344          126 WLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDR--VEVVCMI  203 (342)
Q Consensus       126 ~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~~~~~~~~~~--~~~~~~~  203 (342)
                      .+++|.|.+..+....+++++.-+...++|.+..+-..+....|.+|+...++..|.+....|+..+-.+.  .+.++|.
T Consensus       113 vl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYn  192 (309)
T COG5070         113 VLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYN  192 (309)
T ss_pred             HHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHh
Confidence            99999999999999999999999999988852222233466789999999999999999999998766443  4455666


Q ss_pred             HHHHHHHHHHHHHhhhcccccccccchh--HHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHh
Q 019344          204 GVYGLLVSAVQLSILELKSLESVEWSTN--ILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFY  281 (342)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~  281 (342)
                      .+.+..+.+...+++|+........+..  ........+.++++.-.+-.|..+..+++..++...++..-..+-|.++|
T Consensus       193 NllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvff  272 (309)
T COG5070         193 NLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFF  272 (309)
T ss_pred             hhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhc
Confidence            6777777665566666544432221111  11111122225555556677889999999999999999999999999999


Q ss_pred             cccccHHHHHHHHHHHHHHHhhccCCCCCC
Q 019344          282 HQKVDWLYFLAFGIVVIGLIIYSTTEKDLN  311 (342)
Q Consensus       282 ~e~~~~~~~~G~~li~~g~~l~~~~~~~~~  311 (342)
                      +|+.+...+....+=..+..+|..++++++
T Consensus       273 dap~nf~si~sillGflsg~iYavaks~k~  302 (309)
T COG5070         273 DAPVNFLSIFSILLGFLSGAIYAVAKSKKQ  302 (309)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998888888888765544

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.42  E-value=3e-12  Score=95.08  Aligned_cols=128  Identities=23%  Similarity=0.272  Sum_probs=101.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhh--h----hhHHHHHHHHHHHHHHHHHHH
Q 019344           24 FLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQ--R----LRVAWYWYLLLGFVDVQGNFL   97 (342)
Q Consensus        24 ~~~~~~al~~~~~~~~~~~~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~g~~~~~~~~~   97 (342)
                      +.+.+.|++.+......+.-.  ...+|.+.++.|.....++++.++...++  .    -++.|..+.+.|+.+..+..+
T Consensus         6 ~~ALLsA~fa~L~~iF~KIGl--~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~   83 (140)
T COG2510           6 IYALLSALFAGLTPIFAKIGL--EGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLL   83 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHhc--cccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHH
Confidence            445445554443332222211  34678999999999888777777664332  1    267888899999999999999


Q ss_pred             HHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhhee
Q 019344           98 VNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLL  153 (342)
Q Consensus        98 ~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~  153 (342)
                      ||.|++..+++.+..+..++|+++++++++++|||++..+++|+.+..+|++++..
T Consensus        84 Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          84 YFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            99999999999999999999999999999999999999999999999999998764

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.41  E-value=1.4e-10  Score=99.65  Aligned_cols=245  Identities=15%  Similarity=0.128  Sum_probs=171.7

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHhhhhhh---HHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhh-hhhHHHHHHH
Q 019344           49 DAPVTQSAFAYFSLALVYGGVLLYRRQRLR---VAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLD-CCTIAWAIVL  124 (342)
Q Consensus        49 ~~p~~~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~ii~-~~~pi~~~il  124 (342)
                      .+|....+---..+.++-+.....+++...   ..+..-++.|++...++...+.|+++.+++.+..+. .++-+.+.++
T Consensus        10 G~~~~Q~lG~t~Gali~alv~~~~~~p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~   89 (269)
T PF06800_consen   10 GKPANQILGTTIGALIFALVVFLFRQPAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLI   89 (269)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHH
Confidence            345555544444444444444444454442   677888999999999999999999999999999886 7888889999


Q ss_pred             HHHHhcccchHHH----HHHHHHHHhhhhhheecCCCCCCC-CCCcchHHHHHHHHHHHHHHHHHHHHHHhhccCChHHH
Q 019344          125 TWLFLGTRYSLWQ----LLGAALCVLGLGLVLLSDAGGDGG-GGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEV  199 (342)
Q Consensus       125 ~~l~l~e~~~~~~----~~g~~l~~~Gv~l~~~~~~~~~~~-~~~~~~~G~~l~l~aa~~~a~~~v~~~~~~~~~~~~~~  199 (342)
                      +.++++|.-+..+    .+++++.++|+.+....+.++.+. ...+...|....+++.+.|..|.++.|.  .+.++...
T Consensus        90 gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~--~~~~~~~~  167 (269)
T PF06800_consen   90 GVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA--FHVSGWSA  167 (269)
T ss_pred             HHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh--cCCChhHh
Confidence            9999999777555    458888899999999988633322 3456688999999999999999999886  46777777


Q ss_pred             HHHHHHHHHHHHHHHHHhhhc-ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHH
Q 019344          200 VCMIGVYGLLVSAVQLSILEL-KSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRI  278 (342)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~  278 (342)
                      ..-+ ..|.++..+.+..... ...+...|.....    |.  ....+..++..+.+..+....=....+.++++.+.+.
T Consensus       168 ~lPq-aiGm~i~a~i~~~~~~~~~~~k~~~~nil~----G~--~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI  240 (269)
T PF06800_consen  168 FLPQ-AIGMLIGAFIFNLFSKKPFFEKKSWKNILT----GL--IWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGI  240 (269)
T ss_pred             HHHH-HHHHHHHHHHHhhcccccccccchHHhhHH----HH--HHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhh
Confidence            6666 4555544333333222 1222222322222    22  2222345555577787877777777788999999999


Q ss_pred             HHhcccccHH----HHHHHHHHHHHHHh
Q 019344          279 CFYHQKVDWL----YFLAFGIVVIGLII  302 (342)
Q Consensus       279 ~~~~e~~~~~----~~~G~~li~~g~~l  302 (342)
                      +++||.=+..    .++|.++++.|.++
T Consensus       241 ~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  241 FILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             eEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            9999987764    55788888887654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.37  E-value=1.5e-11  Score=98.42  Aligned_cols=219  Identities=18%  Similarity=0.307  Sum_probs=160.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecCCCCCC
Q 019344           81 WYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDG  160 (342)
Q Consensus        81 ~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~  160 (342)
                      .++.....++....++.+..|++..++++++.+..+...|+.+++++.+|+|+.-.++++.++++.|++++.+.|.    
T Consensus        53 ~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN----  128 (290)
T KOG4314|consen   53 FIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN----  128 (290)
T ss_pred             eeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc----
Confidence            3444555666777799999999999999999999999999999999999999999999999999999999998763    


Q ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHH---HHHHHHHHHHHHhhhc---cc---ccccccchh
Q 019344          161 GGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIG---VYGLLVSAVQLSILEL---KS---LESVEWSTN  231 (342)
Q Consensus       161 ~~~~~~~~G~~l~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~---~~---~~~~~~~~~  231 (342)
                       ...+.+.|+.+++.++...|+|.+..|+.....+--+....+.   ++...+...|..+...   .+   +...+|.. 
T Consensus       129 -~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsFA~~PWG~-  206 (290)
T KOG4314|consen  129 -EHADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGVEHLQSFAAAPWGC-  206 (290)
T ss_pred             -hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHHhhCCchh-
Confidence             2367899999999999999999999999988865544443333   3333333223222221   22   22233322 


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCCCC
Q 019344          232 ILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKD  309 (342)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~  309 (342)
                          ..|....+..+....+.++....+...++-+.....-....+.++-+-..+...+.|..+|.+|..+....++|
T Consensus       207 ----l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~d~  280 (290)
T KOG4314|consen  207 ----LCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPEDK  280 (290)
T ss_pred             ----hhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecccch
Confidence                12222234444566666777777777776666555667777877766678899999999999999988875543

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.33  E-value=1.7e-11  Score=94.97  Aligned_cols=125  Identities=18%  Similarity=0.267  Sum_probs=100.9

Q ss_pred             HHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 019344          178 IFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLS  257 (342)
Q Consensus       178 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (342)
                      ++||.+.+..|+..++.|+.....+.+..+.+ ..+.....+..+....++.......+.+.. +....+.++.+++++.
T Consensus         1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~   78 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLL-GTALAYLLYFYALKYI   78 (126)
T ss_pred             ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhcc-ceehHHHHHHHHHHhc
Confidence            46899999999999999999999999877776 433333334333334444444555555555 5677789999999999


Q ss_pred             hhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhc
Q 019344          258 GATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYS  304 (342)
Q Consensus       258 ~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~  304 (342)
                      ++...+....++|+++.++++++++|++++.+++|+++++.|+++..
T Consensus        79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.31  E-value=4.2e-11  Score=89.06  Aligned_cols=135  Identities=15%  Similarity=0.123  Sum_probs=106.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhhhc-ccccccccchhHHHHHHHHHHHHHHHH
Q 019344          169 GDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILEL-KSLESVEWSTNILLGFAGYAASSFMFY  247 (342)
Q Consensus       169 G~~l~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (342)
                      ...+++++|+++++..++.|--.++.||...+.........+........+. +...+.+...+..+.+-|.  ++....
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGl--a~glsw   81 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGL--AGGLSW   81 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHH--HHHHHH
Confidence            4589999999999999999999999999888887776665555433333333 2332344444455555453  555566


Q ss_pred             HHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhcc
Q 019344          248 TLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYST  305 (342)
Q Consensus       248 ~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  305 (342)
                      .+|+++++...+..+....-+.|++++++++++++|+++..+++|+.+|++|.++..+
T Consensus        82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            8899999999999888888899999999999999999999999999999999987654

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.27  E-value=2.4e-11  Score=102.25  Aligned_cols=270  Identities=13%  Similarity=0.124  Sum_probs=178.8

Q ss_pred             HHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHH-HhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhc-cchhHHHHhhh
Q 019344           38 FTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLL-YRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQF-SSITSVTLLDC  115 (342)
Q Consensus        38 ~~~~~~~~~~~~~p~~~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~-~~~~~~~ii~~  115 (342)
                      .....+.++...+--.+++.++++-+.--+++.- ....+++.+.+.+...-...+..+.+.++++++ ++...-.++.+
T Consensus        20 v~lE~L~~~~pgsgNLITFaqFlFia~eGlif~skf~~~k~kiplk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRs   99 (330)
T KOG1583|consen   20 VFLELLVRNEPGSGNLITFAQFLFIATEGLIFTSKFFTVKPKIPLKDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRS   99 (330)
T ss_pred             HHHHHHHHhCCCCeeehHHHHHHHHHHhceeeeccccccCCCCchhhhheehheeeeeeeeccceeeecccceEEEEEec
Confidence            3444555544344456676676665443333321 111123445566666666666679999999997 47777788899


Q ss_pred             hhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecCCCCCCC------------CCCcchHHHHHHHHHHHHHHHH
Q 019344          116 CTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGG------------GGSRPLLGDVLVIAGTIFFATS  183 (342)
Q Consensus       116 ~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~------------~~~~~~~G~~l~l~aa~~~a~~  183 (342)
                      -+++.+++++++++|+|.+.+|+.++++..+|+++.+..+..+..+            .......|+.+...+-+..|.-
T Consensus       100 gsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~m  179 (330)
T KOG1583|consen  100 GSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYM  179 (330)
T ss_pred             CcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999988755312111            1112368888888999999998


Q ss_pred             HHHHHHhhcc--CChHHHHHHHHHHHHHHHHHHH--Hhhhc-----cc---ccccccc-hhHHHHHHHHHHHHHHHHHHH
Q 019344          184 NVGEEFFVKK--KDRVEVVCMIGVYGLLVSAVQL--SILEL-----KS---LESVEWS-TNILLGFAGYAASSFMFYTLA  250 (342)
Q Consensus       184 ~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  250 (342)
                      .+.++..-++  .++.+.+++..+......+...  ...++     .+   .+..... ...+..++..+...+.+.-..
T Consensus       180 giyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgV  259 (330)
T KOG1583|consen  180 GIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGV  259 (330)
T ss_pred             HHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhh
Confidence            8888887766  5677788887765554432110  00000     00   1111111 111122222222333333333


Q ss_pred             HHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCC
Q 019344          251 PFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTE  307 (342)
Q Consensus       251 ~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  307 (342)
                      +..-...++..+++...++..++.+++.+.|+.+++++.++|..++..|..++....
T Consensus       260 y~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~  316 (330)
T KOG1583|consen  260 YILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVW  316 (330)
T ss_pred             hhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            444555667777788889999999999999999999999999999999999987543

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.27  E-value=1e-10  Score=89.04  Aligned_cols=100  Identities=28%  Similarity=0.485  Sum_probs=82.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhh------hh-hHHHHHHHHHHHHHH-HHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHH
Q 019344           56 AFAYFSLALVYGGVLLYRRQ------RL-RVAWYWYLLLGFVDV-QGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWL  127 (342)
Q Consensus        56 ~~r~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~g~~~~-~~~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l  127 (342)
                      .+|+..+.+++......+++      .. ++++.+....|+++. ..+.++++|+++.+ +.++++.+++|+++.+++.+
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            36777777666665543221      11 345667778788887 55999999999999 58889999999999999999


Q ss_pred             HhcccchHHHHHHHHHHHhhhhhheecCC
Q 019344          128 FLGTRYSLWQLLGAALCVLGLGLVLLSDA  156 (342)
Q Consensus       128 ~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~  156 (342)
                      ++|||+++++++++.++++|++++..++.
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            99999999999999999999999999884

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.23  E-value=3.3e-12  Score=107.12  Aligned_cols=254  Identities=15%  Similarity=0.182  Sum_probs=181.7

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHH--Hhh------hh--h-hHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhh
Q 019344           48 VDAPVTQSAFAYFSLALVYGGVLL--YRR------QR--L-RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCC  116 (342)
Q Consensus        48 ~~~p~~~~~~r~~~~~~~~~~~~~--~~~------~~--~-~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~ii~~~  116 (342)
                      .+.|.+.++++.++...+...+-.  ++-      ++  + -+..+......+....+....+++++|.+++...+-.++
T Consensus        58 Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsL  137 (347)
T KOG1442|consen   58 LDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSL  137 (347)
T ss_pred             cCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccceehhhcceEEEEeccch
Confidence            456999999998887655544433  111      11  1 124456777777777778888999999999999999999


Q ss_pred             hHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhhccCC-
Q 019344          117 TIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKD-  195 (342)
Q Consensus       117 ~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~~~~~~~~~-  195 (342)
                      ..+|+.+++++++|+|-+..-..++.+.++|..+=...++    ..+...+.|.++++.+.++-|+..+..|+.....+ 
T Consensus       138 ttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~----~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~  213 (347)
T KOG1442|consen  138 TTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEG----STGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGD  213 (347)
T ss_pred             hhhHHHHhHHhhcccccccccceeehhheehheecccccc----ccCccchhhhHHHHHHHHHHHHHHHhhheecccccC
Confidence            9999999999999999998888888887777655443331    23467799999999999999999999997665533 


Q ss_pred             -hHHHHHHHHHHHHHHHHHHHHhhhc--ccc---cccccchhHHH-HHHHHHHHHHHHHHHHHHHHhhhhhHHHHhHhhh
Q 019344          196 -RVEVVCMIGVYGLLVSAVQLSILEL--KSL---ESVEWSTNILL-GFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLT  268 (342)
Q Consensus       196 -~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~  268 (342)
                       -..+..+....+.++.+ |.....+  +..   +.. |.+..+. +.++.. +++.-.....+-++..++...++...-
T Consensus       214 ~iw~lt~ynnv~a~lLfl-pll~lnge~~~v~~~~~l-~a~~Fw~~mtLsgl-fgF~mgyvTg~QIK~TSplThnISgTA  290 (347)
T KOG1442|consen  214 CIWRLTAYNNVNALLLFL-PLLILNGEFQAVVGFPHL-PAIKFWILMTLSGL-FGFAMGYVTGWQIKVTSPLTHNISGTA  290 (347)
T ss_pred             eehhhHHHHHHHHHHHHH-HHHHHcchHHHHcCcccc-hHHHHHHHHHHHHH-HHHHhhheeeEEEEecccceeeecHhH
Confidence             34556666677766664 5444432  221   222 2222222 222222 333333334445667888888888887


Q ss_pred             HHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCCC
Q 019344          269 ADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEK  308 (342)
Q Consensus       269 ~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  308 (342)
                      .-....+++..+++|.-+..-|.|-++++.|...|++.++
T Consensus       291 ka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~  330 (347)
T KOG1442|consen  291 KAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKE  330 (347)
T ss_pred             HHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHH
Confidence            8888899999999999999999999999999999998653

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.18  E-value=1.4e-09  Score=87.52  Aligned_cols=137  Identities=17%  Similarity=0.288  Sum_probs=108.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcc-------CChHHHHHHHHHHHHHHHHHHHHhhhccccccc-------cc--chhH
Q 019344          169 GDVLVIAGTIFFATSNVGEEFFVKK-------KDRVEVVCMIGVYGLLVSAVQLSILELKSLESV-------EW--STNI  232 (342)
Q Consensus       169 G~~l~l~aa~~~a~~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~--~~~~  232 (342)
                      |.++++.+.++.|++.++.|+..++       .++.+...+....+.++..+.....|..+....       +.  ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            6789999999999999999987655       467777888888888887666666665432111       01  1122


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhcc
Q 019344          233 LLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYST  305 (342)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  305 (342)
                      .......+...+..+......+++.++...++...+..+...+.++++++|+++..+++|.++.+.|.++|+|
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            3333334446677778888899999999999999999999999999999999999999999999999999875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.17  E-value=1.7e-10  Score=89.37  Aligned_cols=103  Identities=28%  Similarity=0.538  Sum_probs=85.9

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHH--Hhhh--hh-hHHHHHHHHHHHHH-HHHHHHHHHHhhccchhHHHHhhhhhHHHHH
Q 019344           49 DAPVTQSAFAYFSLALVYGGVLL--YRRQ--RL-RVAWYWYLLLGFVD-VQGNFLVNKAYQFSSITSVTLLDCCTIAWAI  122 (342)
Q Consensus        49 ~~p~~~~~~r~~~~~~~~~~~~~--~~~~--~~-~~~~~~~~~~g~~~-~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~  122 (342)
                      .+|...+++|+..+.+ ++....  .+++  .. ++++......|++. ...+.++++++++.+++.++++.+++|+++.
T Consensus        17 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~   95 (126)
T PF00892_consen   17 ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAA   95 (126)
T ss_pred             CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHH
Confidence            7799999999999986 333332  2221  22 45677788888885 5569999999999999999999999999999


Q ss_pred             HHHHHHhcccchHHHHHHHHHHHhhhhhhe
Q 019344          123 VLTWLFLGTRYSLWQLLGAALCVLGLGLVL  152 (342)
Q Consensus       123 il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~  152 (342)
                      +++++++||++++++++|+++++.|++++.
T Consensus        96 i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   96 ILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999998864

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>TIGR00803 nst UDP-galactose transporter

Probab=99.13  E-value=1.8e-09  Score=92.56  Aligned_cols=196  Identities=13%  Similarity=0.090  Sum_probs=127.1

Q ss_pred             chhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecCCC-----------------CC---CCCCCc
Q 019344          106 SITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAG-----------------GD---GGGGSR  165 (342)
Q Consensus       106 ~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~-----------------~~---~~~~~~  165 (342)
                      +........+..++++++....+.+||.+..++++..+...|++.....+.+                 +.   ....++
T Consensus         3 svPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g~   82 (222)
T TIGR00803         3 SVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGN   82 (222)
T ss_pred             cccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccccccc
Confidence            3444566778888888888888888888888888888888888753332210                 00   012245


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhccCChHHH--HHHHHHHHHHHHHHHHHhhhcccccccc--cchhHHHHHHHHHH
Q 019344          166 PLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEV--VCMIGVYGLLVSAVQLSILELKSLESVE--WSTNILLGFAGYAA  241 (342)
Q Consensus       166 ~~~G~~l~l~aa~~~a~~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  241 (342)
                      ...|....+.+..+.+...++.++..|+.+....  ......++.+.........+........  .......... .. 
T Consensus        83 ~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-  160 (222)
T TIGR00803        83 PVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIV-GL-  160 (222)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHH-HH-
Confidence            5788888888888889999999987665433211  1111233333221111111111111110  0001111111 12 


Q ss_pred             HHHHHHHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhh
Q 019344          242 SSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIY  303 (342)
Q Consensus       242 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~  303 (342)
                      .......+..+.+++.++...+....++++++.++++++|||+++..++.|+.+++.|+.+|
T Consensus       161 ~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       161 LNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            33444566788999999999999999999999999999999999999999999999998765

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.11  E-value=4.3e-09  Score=92.42  Aligned_cols=131  Identities=21%  Similarity=0.236  Sum_probs=100.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhhhh---hHHHHHHHHHHHHHHH-H
Q 019344           19 TLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRL---RVAWYWYLLLGFVDVQ-G   94 (342)
Q Consensus        19 ~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~-~   94 (342)
                      ..+|.+++...++.++......+....+...++.....+++.++.+++.+.....++..   ++.+...+..+++... .
T Consensus       126 ~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (260)
T TIGR00950       126 NPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTALA  205 (260)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHH
Confidence            35677777777777777776666655432223445555677787777777765433222   4456667777777654 4


Q ss_pred             HHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhh
Q 019344           95 NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLG  149 (342)
Q Consensus        95 ~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~  149 (342)
                      +.++++++++.+++.++++.++.|+++.+++++++||++++.++.|..+.+.|++
T Consensus       206 ~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       206 YFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999999999999999999999874

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=99.11  E-value=8.1e-09  Score=91.82  Aligned_cols=221  Identities=14%  Similarity=0.197  Sum_probs=127.7

Q ss_pred             HHHHHH-HHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecCCCCCCCCCC
Q 019344           86 LLGFVD-VQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGGS  164 (342)
Q Consensus        86 ~~g~~~-~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~~~  164 (342)
                      +.|+.. ..+..+.+.|+.+.|++..+.+..+.-++.++++..++|||++++++.|+.++++|..++....+++.+..+.
T Consensus        54 ~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~  133 (300)
T PF05653_consen   54 WIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTL  133 (300)
T ss_pred             HHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCH
Confidence            334443 3347788899999999999999999999999999999999999999999999999999877654322211111


Q ss_pred             cc---------hHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHH----HHHHhhhc-ccccccccch
Q 019344          165 RP---------LLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSA----VQLSILEL-KSLESVEWST  230 (342)
Q Consensus       165 ~~---------~~G~~l~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~  230 (342)
                      ++         ....... ...+...+.....+|. .+.+..........+|....+    +...+.+. ...+.. ..+
T Consensus       134 ~~l~~~~~~~~fl~y~~~-~~~~~~~L~~~~~~r~-g~~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~~f-~~~  210 (300)
T PF05653_consen  134 DELIALLSQPGFLVYFIL-VLVLILILIFFIKPRY-GRRNILVYISICSLIGSFTVLSAKAISILIKLTFSGDNQF-TYP  210 (300)
T ss_pred             HHHHHHhcCcceehhHHH-HHHHHHHHHHhhcchh-cccceEEEEEEeccccchhhhHHHHHHHHHHHHhcCchhh-hhh
Confidence            11         1111111 1112222222222221 122221111111122211110    00111111 111111 122


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH-hHhhhHHHHHHHHHHHHhccc--ccH----HHHHHHHHHHHHHHhh
Q 019344          231 NILLGFAGYAASSFMFYTLAPFVLKLSGATMFN-LSLLTADMWAVVFRICFYHQK--VDW----LYFLAFGIVVIGLIIY  303 (342)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~pv~~~~~~~~~~~e~--~~~----~~~~G~~li~~g~~l~  303 (342)
                      ..+........+........++++++.++..+. +....-...+++-+.++++|.  .++    ....|..+++.|+++.
T Consensus       211 ~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL  290 (300)
T PF05653_consen  211 LTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLL  290 (300)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhhee
Confidence            223344444446666667788999998877433 344455578889999999985  444    4577888899999988


Q ss_pred             ccCCCC
Q 019344          304 STTEKD  309 (342)
Q Consensus       304 ~~~~~~  309 (342)
                      +..+++
T Consensus       291 ~~~~~~  296 (300)
T PF05653_consen  291 SSSKDK  296 (300)
T ss_pred             eccCch
Confidence            765443

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.94  E-value=2.7e-06  Score=76.45  Aligned_cols=226  Identities=12%  Similarity=0.077  Sum_probs=141.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHh-hhhhHHHHHHHHHHHhcccc-------hHHHHHHHHHHHhhhh
Q 019344           78 RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRY-------SLWQLLGAALCVLGLG  149 (342)
Q Consensus        78 ~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pi~~~il~~l~l~e~~-------~~~~~~g~~l~~~Gv~  149 (342)
                      ...+..-++.|++...++.+++.++++.+++.+..+ ..++-+...++..++++|-.       ...-.+|+++.++|+.
T Consensus        70 ~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~  149 (345)
T PRK13499         70 GSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVA  149 (345)
T ss_pred             HHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHH
Confidence            456677888999999999999999999999999855 58999999999999988643       2346889999999999


Q ss_pred             hhee----cCCCCCC--CCCCcchHHHHHHHHHHHHHHHHH-------HHHHHhh-ccCChHHHHHHHH---HHHHHHHH
Q 019344          150 LVLL----SDAGGDG--GGGSRPLLGDVLVIAGTIFFATSN-------VGEEFFV-KKKDRVEVVCMIG---VYGLLVSA  212 (342)
Q Consensus       150 l~~~----~~~~~~~--~~~~~~~~G~~l~l~aa~~~a~~~-------v~~~~~~-~~~~~~~~~~~~~---~~~~~~~~  212 (342)
                      +...    .+.++.+  +.+.+...|+.+++.+.+.++.|.       ...+... .+.++.....-+.   +.+.++.-
T Consensus       150 l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n  229 (345)
T PRK13499        150 IVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITN  229 (345)
T ss_pred             HHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHH
Confidence            9988    4431111  234566899999999999999999       4443321 1233332222221   23333221


Q ss_pred             HHHHhh---hcccc---cccc------cchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-H---HHhHhhhHHHHHHHH
Q 019344          213 VQLSIL---ELKSL---ESVE------WSTNILLGFAGYAASSFMFYTLAPFVLKLSGAT-M---FNLSLLTADMWAVVF  276 (342)
Q Consensus       213 ~~~~~~---~~~~~---~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~---~~~~~~~~pv~~~~~  276 (342)
                      ...-..   ..+..   ....      +.........|.  .....+.++..+-...+.. .   ..+.+....+++.++
T Consensus       230 ~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~--~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistlw  307 (345)
T PRK13499        230 LGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV--MWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLW  307 (345)
T ss_pred             HHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHH--HHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHh
Confidence            111111   11111   1111      111111111121  3333344444444444222 1   124445666899999


Q ss_pred             HHHHhccccc------HHHHHHHHHHHHHHHhhccC
Q 019344          277 RICFYHQKVD------WLYFLAFGIVVIGLIIYSTT  306 (342)
Q Consensus       277 ~~~~~~e~~~------~~~~~G~~li~~g~~l~~~~  306 (342)
                      +.+ +||.=+      ...++|.+++++|..+....
T Consensus       308 Gi~-lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        308 GLV-LKEWKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             hhh-hhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            995 899866      67799999999999887654

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.92  E-value=6.5e-08  Score=86.66  Aligned_cols=139  Identities=11%  Similarity=0.096  Sum_probs=105.4

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhhhc-cccc-cc-ccchhHHHHHHHHH
Q 019344          164 SRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILEL-KSLE-SV-EWSTNILLGFAGYA  240 (342)
Q Consensus       164 ~~~~~G~~l~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~-~~~~~~~~~~~~~~  240 (342)
                      .+...|.++++.+++.|+...+..|.. .+.+|.+...+...++.++..+....... .+.. .. ++... .....+..
T Consensus         4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   81 (296)
T PRK15430          4 KQTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKI-FMLAVSAV   81 (296)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHH-HHHHHHHH
Confidence            456789999999999999999999864 67899999999988877655422222211 1100 01 12111 12223333


Q ss_pred             HHHHHHHHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhcc
Q 019344          241 ASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYST  305 (342)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  305 (342)
                       .....+.++++++++.++..+++..++.|++..++++++++|+++..++.|.++.++|+.+...
T Consensus        82 -~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~  145 (296)
T PRK15430         82 -LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLW  145 (296)
T ss_pred             -HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence             5556678899999999999999999999999999999999999999999999999999987653

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.91  E-value=6.5e-08  Score=85.99  Aligned_cols=132  Identities=8%  Similarity=0.061  Sum_probs=94.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhhh--cccccccccchhHHHHHHHHHHHHHHHH
Q 019344          170 DVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILE--LKSLESVEWSTNILLGFAGYAASSFMFY  247 (342)
Q Consensus       170 ~~l~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (342)
                      .++.+.+++++|...+..|+..++.++..  .+....+.+... |.....  ....+..+..++. ....+.. ....++
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~~--~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~   77 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEPDFL--WWALLAHSVLLT-PYGLWYLAQVGWSRLPATFWL-LLAISAV-ANMVYF   77 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchhHHH--HHHHHHHHHHHH-HHHHHhcccCCCCCcchhhHH-HHHHHHH-HHHHHH
Confidence            46889999999999999998777755533  333333433332 333322  1111211112222 2222332 566777


Q ss_pred             HHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccC
Q 019344          248 TLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTT  306 (342)
Q Consensus       248 ~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  306 (342)
                      .++.++.++.++...+...++.|+++.++++++++|+++..+++|..+++.|+.+....
T Consensus        78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~  136 (281)
T TIGR03340        78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS  136 (281)
T ss_pred             HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            88888999999999999999999999999999999999999999999999999887653

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00688 rarD rarD protein

Probab=98.87  E-value=1.4e-07  Score=82.63  Aligned_cols=135  Identities=13%  Similarity=0.188  Sum_probs=101.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhhhc-c----cccccccchhH-HHHHHHHHH
Q 019344          168 LGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILEL-K----SLESVEWSTNI-LLGFAGYAA  241 (342)
Q Consensus       168 ~G~~l~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~-~~~~~~~~~  241 (342)
                      +|..+.++++++|+...+..|. ..+.+|.+..++.++++.++..+....... .    ........... .....+.  
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL--   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH--
Confidence            4889999999999999999997 467999999999988877665332222221 1    11111111111 1222222  


Q ss_pred             HHHHHHHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhcc
Q 019344          242 SSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYST  305 (342)
Q Consensus       242 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  305 (342)
                      .....+.++..+.++.++..++...++.|+++.++++++++|+++..+++|..+.++|+.+...
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~  142 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV  142 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence            3556668888899999999999999999999999999999999999999999999999887643

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.86  E-value=3.7e-08  Score=85.36  Aligned_cols=225  Identities=13%  Similarity=0.148  Sum_probs=134.4

Q ss_pred             HHHHHHHHHHH-HHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecCCCCCCCC
Q 019344           84 YLLLGFVDVQG-NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGG  162 (342)
Q Consensus        84 ~~~~g~~~~~~-~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~~~~~~~  162 (342)
                      ....|++..+. ....|.|+.+.|++..+.+..++-+..++++..++|||++....+|+.++++|-.+++...+++.+-.
T Consensus        66 ~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~  145 (335)
T KOG2922|consen   66 LWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIE  145 (335)
T ss_pred             HHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccc
Confidence            34456665555 88889999999999999999999999999999999999999999999999999999988765332211


Q ss_pred             C---------CcchHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHH----HHHHhhh-ccccccccc
Q 019344          163 G---------SRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSA----VQLSILE-LKSLESVEW  228 (342)
Q Consensus       163 ~---------~~~~~G~~l~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~  228 (342)
                      .         +...+.....+....+  +-....|..-.+.+...+.....+.|.+-..    +..++-. .+...+...
T Consensus       146 t~~el~~~~~~~~Fliy~~~iil~~~--il~~~~~p~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ql~~  223 (335)
T KOG2922|consen  146 SVEEVWELATEPGFLVYVIIIILIVL--ILIFFYAPRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNNQLFY  223 (335)
T ss_pred             cHHHHHHHhcCccHHHHHHHHHHHHH--HHheeecccccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCccccc
Confidence            1         1111111111111111  1111112111223344444333333322110    0111111 111112111


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH-hHhhhHHHHHHHHHHHHhcccc--cH----HHHHHHHHHHHHHH
Q 019344          229 STNILLGFAGYAASSFMFYTLAPFVLKLSGATMFN-LSLLTADMWAVVFRICFYHQKV--DW----LYFLAFGIVVIGLI  301 (342)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~pv~~~~~~~~~~~e~~--~~----~~~~G~~li~~g~~  301 (342)
                       +..+.+.+....+......-.+++++..++..+. +....-..++++-+.++|+|.-  +.    ....|...++.|++
T Consensus       224 -~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~f  302 (335)
T KOG2922|consen  224 -PLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIF  302 (335)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheee
Confidence             1223333333334444445568888887776544 4455677889999999999854  32    57789999999999


Q ss_pred             hhccCCCCCC
Q 019344          302 IYSTTEKDLN  311 (342)
Q Consensus       302 l~~~~~~~~~  311 (342)
                      +....++++.
T Consensus       303 lL~~~kd~~~  312 (335)
T KOG2922|consen  303 LLHRTKDMEI  312 (335)
T ss_pred             Eeeeeccccc
Confidence            9876654443

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.80  E-value=2.5e-07  Score=84.56  Aligned_cols=138  Identities=15%  Similarity=0.120  Sum_probs=92.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHH-HHHhhhhh-------hHHHHHHHHHHH
Q 019344           18 RTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGV-LLYRRQRL-------RVAWYWYLLLGF   89 (342)
Q Consensus        18 ~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~p~~~~~~r~~~~~~~~~~~-~~~~~~~~-------~~~~~~~~~~g~   89 (342)
                      +.+.|.++....++.++......+....+ ..++...+++...+..+.+... ....+...       .......+..++
T Consensus       186 ~~~lG~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i  264 (358)
T PLN00411        186 DWLIGGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAI  264 (358)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHHHHH
Confidence            34557777766677776665555544433 3334444555544443333222 22211110       111112333444


Q ss_pred             HHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecCC
Q 019344           90 VDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDA  156 (342)
Q Consensus        90 ~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~  156 (342)
                      .....+.++++++++.+++.+++..++.|++++++++++++|++++.+++|.++.+.|+.++..+..
T Consensus       265 ~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~  331 (358)
T PLN00411        265 ITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKA  331 (358)
T ss_pred             HHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhh
Confidence            4444588899999999999999999999999999999999999999999999999999999887543

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.76  E-value=7.2e-07  Score=79.80  Aligned_cols=132  Identities=16%  Similarity=0.027  Sum_probs=94.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhhh-h--hHHHHHHHHHHHHHHHH-HH
Q 019344           21 YLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR-L--RVAWYWYLLLGFVDVQG-NF   96 (342)
Q Consensus        21 ~~~~~~~~~al~~~~~~~~~~~~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~g~~~~~~-~~   96 (342)
                      .|.+++...++.++......+...+  ..+|.... +...+..+++.++....... .  ...+...+..|++.... +.
T Consensus       148 ~G~ll~l~aa~~~a~~~v~~r~~~~--~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~~  224 (293)
T PRK10532        148 TGAALALGAGACWAIYILSGQRAGA--EHGPATVA-IGSLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPYS  224 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc--cCCchHHH-HHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            4666666666666665555554432  23455544 33444455555554432221 1  23344456777776666 88


Q ss_pred             HHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecC
Q 019344           97 LVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (342)
Q Consensus        97 ~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  155 (342)
                      ++++++++.+++.++++.+++|+++.++++++++|++++.+++|..+.+.|++......
T Consensus       225 l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        225 LEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999999999987654

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.74  E-value=3.7e-07  Score=81.64  Aligned_cols=132  Identities=15%  Similarity=-0.007  Sum_probs=96.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhh---h--hhHHHHHHHHHHHHHHHH-
Q 019344           21 YLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQ---R--LRVAWYWYLLLGFVDVQG-   94 (342)
Q Consensus        21 ~~~~~~~~~al~~~~~~~~~~~~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~g~~~~~~-   94 (342)
                      .|.+++...++.++......+...   ..++...+.++..++.+.+.++......   .  ..+.|...+..+++.... 
T Consensus       150 ~G~l~~l~a~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~  226 (292)
T PRK11272        150 WGAILILIASASWAFGSVWSSRLP---LPVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIA  226 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcC---CCcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence            455556555555555544443322   1234455566766676666555442211   1  135677777788876555 


Q ss_pred             HHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecC
Q 019344           95 NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (342)
Q Consensus        95 ~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  155 (342)
                      +.++++++++.+++.++++.++.|++++++++++++|++++.+++|..+.+.|+++....+
T Consensus       227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~  287 (292)
T PRK11272        227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK  287 (292)
T ss_pred             HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            8899999999999999999999999999999999999999999999999999999986654

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.70  E-value=1.2e-06  Score=67.71  Aligned_cols=122  Identities=7%  Similarity=0.058  Sum_probs=88.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhhhcccccccccchhHHHHHHHHHHHHHHHH
Q 019344          168 LGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFY  247 (342)
Q Consensus       168 ~G~~l~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (342)
                      .|.++.+.+.++.+...++.|+-.++.+..+.....     ... + ....+           .....+.+.. +...++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~~-----~~~-~-~~~~~-----------p~~~i~lgl~-~~~la~   62 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWDF-----IAA-L-LAFGL-----------ALRAVLLGLA-GYALSM   62 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhHH-----HHH-H-HHHhc-----------cHHHHHHHHH-HHHHHH
Confidence            477888999999999999999887775543322110     000 0 00000           0123445565 777888


Q ss_pred             HHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHH--HhcccccHHHHHHHHHHHHHHHhhccCCC
Q 019344          248 TLAPFVLKLSGATMFNLSLLTADMWAVVFRIC--FYHQKVDWLYFLAFGIVVIGLIIYSTTEK  308 (342)
Q Consensus       248 ~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~--~~~e~~~~~~~~G~~li~~g~~l~~~~~~  308 (342)
                      .+|..++++.+...+.......++...+.++.  +|||++|+.+++|.++|++|+++..+.++
T Consensus        63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            99999999999998887777777777777774  89999999999999999999999886544

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.60  E-value=3.9e-06  Score=67.31  Aligned_cols=130  Identities=15%  Similarity=0.129  Sum_probs=102.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-----CCCchHHHHHHHHHHHHHHHHHHHH-Hhhhh---------------hhHH
Q 019344           22 LLFLGQLVSFTLALMSFTSSLIADL-----GVDAPVTQSAFAYFSLALVYGGVLL-YRRQR---------------LRVA   80 (342)
Q Consensus        22 ~~~~~~~~al~~~~~~~~~~~~~~~-----~~~~p~~~~~~r~~~~~~~~~~~~~-~~~~~---------------~~~~   80 (342)
                      |++++....++.+.-....+...++     ...+|..+..+....+.+++.+... .++.+               ..+.
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            4566667777777777777777766     3566888888887777776666543 11111               1234


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhh
Q 019344           81 WYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLV  151 (342)
Q Consensus        81 ~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~  151 (342)
                      +...+..|++....+...+..++++++...+++.....+.+.+++.++++|+++..++.|+.++++|+.+-
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY  151 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence            55667777777777999999999999999999999999999999999999999999999999999998763

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.60  E-value=1.4e-06  Score=65.60  Aligned_cols=64  Identities=11%  Similarity=0.002  Sum_probs=58.6

Q ss_pred             HHHHH-HHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhhee
Q 019344           90 VDVQG-NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLL  153 (342)
Q Consensus        90 ~~~~~-~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~  153 (342)
                      ..... ..++..++++.|.+.+..+.++.++++.+++++++|||+++++++|+.+++.|++++..
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            44444 88899999999999999999999999999999999999999999999999999988754

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.59  E-value=1.8e-06  Score=77.25  Aligned_cols=77  Identities=22%  Similarity=0.094  Sum_probs=68.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecC
Q 019344           79 VAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (342)
Q Consensus        79 ~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  155 (342)
                      ..|...+..|+.....+.++++++++.+++.++.+.++.|++..++++++++|+++..+++|.++++.|+.+....+
T Consensus       213 ~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~  289 (295)
T PRK11689        213 PAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT  289 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence            45656666666555569999999999999999999999999999999999999999999999999999998886654

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.56  E-value=5.3e-06  Score=74.42  Aligned_cols=136  Identities=15%  Similarity=0.087  Sum_probs=93.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHHHH-HHhhh--------hh-hHHHHHHHHHH
Q 019344           20 LYLLFLGQLVSFTLALMSFTSSLIADLGVD-APVTQSAFAYFSLALVYGGVL-LYRRQ--------RL-RVAWYWYLLLG   88 (342)
Q Consensus        20 ~~~~~~~~~~al~~~~~~~~~~~~~~~~~~-~p~~~~~~r~~~~~~~~~~~~-~~~~~--------~~-~~~~~~~~~~g   88 (342)
                      +.|..++...++.++......+...++... .......+......+.+.... .....        .. ...|...+..|
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  221 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA  221 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence            357777777777777766666654433221 122223232333222222111 11111        11 34567777788


Q ss_pred             HHHHHH-HHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecC
Q 019344           89 FVDVQG-NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (342)
Q Consensus        89 ~~~~~~-~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  155 (342)
                      ++.... +.+++.++++.++..++.+..+.|++..++++++++|+++..+++|..+.+.|+.+...+.
T Consensus       222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            777766 8899999999999999999999999999999999999999999999999999999877654

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.56  E-value=1.6e-06  Score=77.32  Aligned_cols=131  Identities=11%  Similarity=0.064  Sum_probs=97.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHH----HHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHH
Q 019344           18 RTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYF----SLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQ   93 (342)
Q Consensus        18 ~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~p~~~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   93 (342)
                      +..+|++.+.++++..+......+..    ..+|...++....    .+.++..++ .+.++...+..+..++.|++...
T Consensus       149 ~~~~Gi~~~l~sg~~y~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Gi~~~i  223 (290)
T TIGR00776       149 NFKKGILLLLMSTIGYLVYVVVAKAF----GVDGLSVLLPQAIGMVIGGIIFNLGH-ILAKPLKKYAILLNILPGLMWGI  223 (290)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHc----CCCcceehhHHHHHHHHHHHHHHHHH-hcccchHHHHHHHHHHHHHHHHH
Confidence            34679999988888877766666543    2456666544443    334434333 11122223344455668888766


Q ss_pred             HHHHHHHHhh-ccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHH----HHHHHHHhhhhhhee
Q 019344           94 GNFLVNKAYQ-FSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQL----LGAALCVLGLGLVLL  153 (342)
Q Consensus        94 ~~~~~~~al~-~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~----~g~~l~~~Gv~l~~~  153 (342)
                      .+.+++.+.+ +.+++.++++.+..|+...+.+.+++||+.+++++    +|.++.+.|+.++..
T Consensus       224 a~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       224 GNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            7999999999 99999999999999999999999999999999999    999999999988754

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=98.47  E-value=2e-08  Score=83.47  Aligned_cols=261  Identities=15%  Similarity=0.120  Sum_probs=166.2

Q ss_pred             HHHHHHHH-HhcCCCchHHHHHHHHHHHHHHHHHHHHHhhhhh-hHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHh
Q 019344           36 MSFTSSLI-ADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRL-RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLL  113 (342)
Q Consensus        36 ~~~~~~~~-~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~ii  113 (342)
                      .+|.+-.+ ..|-...|...+.--.+.+.++....++...+.. .+.+..-++.|.+..+++...+.|.++.+++.+..+
T Consensus        12 l~WGsip~v~~k~GG~p~qQ~lGtT~GALifaiiv~~~~~p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPi   91 (288)
T COG4975          12 LGWGSIPLVANKFGGKPYQQTLGTTLGALIFAIIVFLFVSPELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPI   91 (288)
T ss_pred             HHhcccceeeeecCCChhHhhhhccHHHHHHHHHHheeecCccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccc
Confidence            33444333 3444456777764444445555444444433333 456666788888889999999999999999999977


Q ss_pred             h-hhhHHHHHHHHHHHhcccchHHH----HHHHHHHHhhhhhheecCCCCCC-CCCCcchHHHHHHHHHHHHHHHHHHHH
Q 019344          114 D-CCTIAWAIVLTWLFLGTRYSLWQ----LLGAALCVLGLGLVLLSDAGGDG-GGGSRPLLGDVLVIAGTIFFATSNVGE  187 (342)
Q Consensus       114 ~-~~~pi~~~il~~l~l~e~~~~~~----~~g~~l~~~Gv~l~~~~~~~~~~-~~~~~~~~G~~l~l~aa~~~a~~~v~~  187 (342)
                      . .++.+-+.+++++.++|-.+..+    .+++++.++|+.+..+.+.++.+ +..++...|....+.+.+.|-.|.+..
T Consensus        92 StG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~  171 (288)
T COG4975          92 STGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLF  171 (288)
T ss_pred             cchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhhheeeeeeeccceeeeEeee
Confidence            5 78888899999999999887665    56777888999999888753222 233446789999999999999999987


Q ss_pred             HHhhccCChHHHHHHHHHHHHHHHHHHHHhhhc-ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhHh
Q 019344          188 EFFVKKKDRVEVVCMIGVYGLLVSAVQLSILEL-KSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSL  266 (342)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~  266 (342)
                      +...  .+-.+...-+ ..|.++..+.+...+. ...+...|.....    |.  .....+.++..+.++.+.+..=-..
T Consensus       172 ~~f~--v~g~saiLPq-AiGMv~~ali~~~~~~~~~~~K~t~~nii~----G~--~Wa~GNl~ml~a~~~~GvAt~FSlS  242 (288)
T COG4975         172 QLFD--VDGLSAILPQ-AIGMVIGALILGFFKMEKRFNKYTWLNIIP----GL--IWAIGNLFMLLAAQKVGVATSFSLS  242 (288)
T ss_pred             cccc--ccchhhhhHH-HHHHHHHHHHHhhcccccchHHHHHHHHhh----HH--HHHhhHHHHHHhhhhhceeeeeeHh
Confidence            7642  4444444333 4555555433333332 1111222211111    11  2222334444455554444332333


Q ss_pred             hhHHHHHHHHHHHHhcccccHHH----HHHHHHHHHHHHhhcc
Q 019344          267 LTADMWAVVFRICFYHQKVDWLY----FLAFGIVVIGLIIYST  305 (342)
Q Consensus       267 ~~~pv~~~~~~~~~~~e~~~~~~----~~G~~li~~g~~l~~~  305 (342)
                      .+..+++.+-+.++++|+=|..+    ++|.++++.|..+...
T Consensus       243 QlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~  285 (288)
T COG4975         243 QLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGI  285 (288)
T ss_pred             hheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhhe
Confidence            34458899999999999988865    5678888877766543

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.47  E-value=3.8e-06  Score=75.54  Aligned_cols=135  Identities=13%  Similarity=0.076  Sum_probs=90.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhh-hh-hhH---H----------HHHHH
Q 019344           21 YLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRR-QR-LRV---A----------WYWYL   85 (342)
Q Consensus        21 ~~~~~~~~~al~~~~~~~~~~~~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~-~~-~~~---~----------~~~~~   85 (342)
                      .|.+++...++.++......+....+...+|...+.+....+.+.+.|+..... .. ...   +          +...+
T Consensus       145 ~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (302)
T TIGR00817       145 AGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSL  224 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHH
Confidence            455555555555555444444433322456788888888777777777654221 11 110   0          11112


Q ss_pred             HHHHHHHHH-HHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecC
Q 019344           86 LLGFVDVQG-NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (342)
Q Consensus        86 ~~g~~~~~~-~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  155 (342)
                      ..+...... +.+.+.++++.++..+++...+.|+++.++++++++|+++..+++|..+++.|+.+.....
T Consensus       225 ~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k  295 (302)
T TIGR00817       225 VAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK  295 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence            222212222 4566789999999999999999999999999999999999999999999999999987654

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.38  E-value=3.1e-05  Score=70.94  Aligned_cols=137  Identities=10%  Similarity=0.081  Sum_probs=96.2

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhccCC-hHHHHHHHHHHHHHHHHHHHHhhhcccccccc-cc-hhHHHHHHHHHHH
Q 019344          166 PLLGDVLVIAGTIFFATSNVGEEFFVKKKD-RVEVVCMIGVYGLLVSAVQLSILELKSLESVE-WS-TNILLGFAGYAAS  242 (342)
Q Consensus       166 ~~~G~~l~l~aa~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~  242 (342)
                      +..-..+.+.--.+...+++.+|...+..+ |..+..++...+.++..+.. ..+....+... +. .+..+...+++  
T Consensus        47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~llp~gl~--  123 (350)
T PTZ00343         47 KWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYW-ATGFRKIPRIKSLKLFLKNFLPQGLC--  123 (350)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHH-HhCCCCCCCCCCHHHHHHHHHHHHHH--
Confidence            344444444445555667888999998888 99999999888776653322 22221112221 11 11223333332  


Q ss_pred             HHHHHHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhcc
Q 019344          243 SFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYST  305 (342)
Q Consensus       243 ~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  305 (342)
                      ....+...+.++++.++....+...++|++++++++++++|+++..++.|.+++++|+.+...
T Consensus       124 ~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~  186 (350)
T PTZ00343        124 HLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV  186 (350)
T ss_pred             HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence            233345566789999999999999999999999999999999999999999999999998764

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.37  E-value=1.2e-05  Score=61.08  Aligned_cols=67  Identities=15%  Similarity=0.280  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCCCC
Q 019344          242 SSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKD  309 (342)
Q Consensus       242 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~  309 (342)
                      .....+.++..+.++.++ .+.....+.|+++.+++.++++|+++..++.|..++++|+.+..+.+..
T Consensus        44 ~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   44 GFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            334567888889999885 6678888999999999999999999999999999999999999886543

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.30  E-value=4.4e-05  Score=67.77  Aligned_cols=133  Identities=29%  Similarity=0.297  Sum_probs=95.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHH-HHHHHHHHHHHHHHHHhh--hhhhHHHHHHHHHHHHHHH-H
Q 019344           19 TLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSA-FAYFSLALVYGGVLLYRR--QRLRVAWYWYLLLGFVDVQ-G   94 (342)
Q Consensus        19 ~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~p~~~~~-~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~-~   94 (342)
                      ...|..++...++.++......+...   ..++..... +..........+......  ......+......|++... .
T Consensus       152 ~~~g~~~~l~a~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~  228 (292)
T COG0697         152 SLLGLLLALAAALLWALYTALVKRLS---RLGPVTLALLLQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLA  228 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHH
Confidence            35667777766666665444444433   233444443 333322333333332222  2235678888888888886 5


Q ss_pred             HHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheec
Q 019344           95 NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLS  154 (342)
Q Consensus        95 ~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~  154 (342)
                      +.++++++++.+++.++.+..+.|++..++++++++|+++..+++|..+.+.|+.+....
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         229 YLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999999999999999999999999999999999999988765

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.27  E-value=2.8e-05  Score=67.01  Aligned_cols=142  Identities=13%  Similarity=0.151  Sum_probs=104.2

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhhhc-ccccccccchhHHHHHHHHHHH
Q 019344          164 SRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILEL-KSLESVEWSTNILLGFAGYAAS  242 (342)
Q Consensus       164 ~~~~~G~~l~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  242 (342)
                      .+...|+++++.|-+.|+..-.+.|- .+..++.++......++..+.++....... .+..+.--+......+......
T Consensus         3 ~~~~~Gil~~l~Ay~lwG~lp~y~kl-l~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l   81 (293)
T COG2962           3 KDSRKGILLALLAYLLWGLLPLYFKL-LEPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL   81 (293)
T ss_pred             CcccchhHHHHHHHHHHHHHHHHHHH-HccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence            45568999999999999998877764 578899999998888888877654444332 2222211111122222222213


Q ss_pred             HHHHHHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccC
Q 019344          243 SFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTT  306 (342)
Q Consensus       243 ~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  306 (342)
                      .......+.++.+.....-+++-.+++|++.+++|.++++|+++..|++...+..+|+....+.
T Consensus        82 i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~  145 (293)
T COG2962          82 IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL  145 (293)
T ss_pred             HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence            3334466778889989999999999999999999999999999999999999999999876653

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.25  E-value=6.4e-05  Score=56.64  Aligned_cols=64  Identities=14%  Similarity=0.176  Sum_probs=57.0

Q ss_pred             HHHHHHHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhcc
Q 019344          242 SSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYST  305 (342)
Q Consensus       242 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  305 (342)
                      +...++.++..++++.+...+-....+.++.+.+.++++|||++++.+++|..++++|+.+...
T Consensus        46 ~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         46 CLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            5566778889999999988887777799999999999999999999999999999999987653

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.22  E-value=9.3e-06  Score=62.77  Aligned_cols=72  Identities=24%  Similarity=0.285  Sum_probs=63.5

Q ss_pred             HHHHHHHHHHH-HHHHHHHhhccchhHHHHhhhhhHHHHHHHHHH--HhcccchHHHHHHHHHHHhhhhhheecC
Q 019344           84 YLLLGFVDVQG-NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWL--FLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (342)
Q Consensus        84 ~~~~g~~~~~~-~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l--~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  155 (342)
                      ++..|+..... +.++..++++.|++.+..+.+..++++.+.++.  ++||++++.+++|+.+.++|++++..++
T Consensus        50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            45666666666 999999999999999999999999888888885  8999999999999999999999988654

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.94  E-value=0.00015  Score=55.07  Aligned_cols=67  Identities=10%  Similarity=0.275  Sum_probs=51.8

Q ss_pred             HHHHHHHHHHHHHhhhhhHH-HHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCCC
Q 019344          242 SSFMFYTLAPFVLKLSGATM-FNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEK  308 (342)
Q Consensus       242 ~~~~~~~~~~~~~~~~~a~~-~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  308 (342)
                      +....+.++..++++.+... .+...-+..+...+.++++|+|++++.+++|..+|++|++..+...+
T Consensus        39 ~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~  106 (120)
T PRK10452         39 MISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTR  106 (120)
T ss_pred             HHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCC
Confidence            44455677777888866653 33333456688999999999999999999999999999998866543

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=97.88  E-value=0.00055  Score=57.83  Aligned_cols=132  Identities=15%  Similarity=-0.009  Sum_probs=93.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhhhh---hHHHHHHHHHHHHHHHH-HHH
Q 019344           22 LLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRL---RVAWYWYLLLGFVDVQG-NFL   97 (342)
Q Consensus        22 ~~~~~~~~al~~~~~~~~~~~~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~-~~~   97 (342)
                      |..++.....+|+...+..+...+  ..+--.-+..-+.+++++.+|+-.......   ..-...-+..|++.... +.+
T Consensus       149 Gv~~Al~AG~~Wa~YIv~G~r~g~--~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalPYsL  226 (292)
T COG5006         149 GVALALGAGACWALYIVLGQRAGR--AEHGTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALPYSL  226 (292)
T ss_pred             HHHHHHHHhHHHHHHHHHcchhcc--cCCCchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccchHH
Confidence            444444455555555444444432  223233334667788888888776433322   22334446667777777 888


Q ss_pred             HHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecC
Q 019344           98 VNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (342)
Q Consensus        98 ~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  155 (342)
                      -..++++.|...-.++.++.|.+.++.+.++++|+++..||.++...+.+..=.+...
T Consensus       227 EmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~  284 (292)
T COG5006         227 EMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTA  284 (292)
T ss_pred             HHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccccc
Confidence            8999999999999999999999999999999999999999999999988877555543

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.87  E-value=0.00073  Score=60.94  Aligned_cols=70  Identities=14%  Similarity=0.236  Sum_probs=63.2

Q ss_pred             HHHHHHHHHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCCCC
Q 019344          240 AASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKD  309 (342)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~  309 (342)
                      ...-..++.+...+.++++.+...+......++++++++++++++.++.+++|+.+.++|+.+....+..
T Consensus        86 a~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~  155 (334)
T PF06027_consen   86 ALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVL  155 (334)
T ss_pred             HHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccc
Confidence            4477778888999999999999999999999999999999999999999999999999999988876543

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.83  E-value=0.00013  Score=55.30  Aligned_cols=72  Identities=15%  Similarity=0.172  Sum_probs=61.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccchhHHHHhh-hhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecC
Q 019344           84 YLLLGFVDVQGNFLVNKAYQFSSITSVTLLD-CCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (342)
Q Consensus        84 ~~~~g~~~~~~~~~~~~al~~~~~~~~~ii~-~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  155 (342)
                      .+..-++...++.++..++++.|.+.+..+. ...-+.+.+++.+++||++++.+++|+.+.++|++.+-..+
T Consensus        33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            3444444445588899999999999998775 79999999999999999999999999999999999987654

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.82  E-value=0.00048  Score=59.73  Aligned_cols=129  Identities=11%  Similarity=0.021  Sum_probs=85.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHHHHHHH
Q 019344           17 LRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR-LRVAWYWYLLLGFVDVQGN   95 (342)
Q Consensus        17 ~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~   95 (342)
                      +++.+|+..-.+..+.    .+....+.+..+.+|+...+-+.....+....+....+++ .++..++-++.|++...++
T Consensus       134 ~~~~kgi~~Ll~stig----y~~Y~~~~~~~~~~~~~~~lPqaiGm~i~a~i~~~~~~~~~~~k~~~~nil~G~~w~ign  209 (269)
T PF06800_consen  134 SNMKKGILALLISTIG----YWIYSVIPKAFHVSGWSAFLPQAIGMLIGAFIFNLFSKKPFFEKKSWKNILTGLIWGIGN  209 (269)
T ss_pred             cchhhHHHHHHHHHHH----HHHHHHHHHhcCCChhHhHHHHHHHHHHHHHHHhhcccccccccchHHhhHHHHHHHHHH
Confidence            4556666544333333    3333344333556676666555443333333333322222 2344556788999999999


Q ss_pred             HHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHH----HHHHHHhhhh
Q 019344           96 FLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLL----GAALCVLGLG  149 (342)
Q Consensus        96 ~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~----g~~l~~~Gv~  149 (342)
                      .+++.|.+..+.+.+..+..+..++..+.+.+++||+-+++++.    |+++.++|.+
T Consensus       210 l~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  210 LFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             HHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            99999999999999999999999999999999999998888754    4444445544

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.79  E-value=0.00085  Score=60.32  Aligned_cols=130  Identities=10%  Similarity=0.092  Sum_probs=88.1

Q ss_pred             HHHHHHHHHHHHhhccCC----hHHHHHHHHHHHHHHHHHHHHhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 019344          178 IFFATSNVGEEFFVKKKD----RVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFV  253 (342)
Q Consensus       178 ~~~a~~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (342)
                      .++..+.+.+++..++..    +..+.+.+.....+...+..........+..++...   .  .......+...+.+.+
T Consensus        10 ~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~a   84 (303)
T PF08449_consen   10 GGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKY---A--ILSFLFFLASVLSNAA   84 (303)
T ss_pred             HHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHH---H--HHHHHHHHHHHHHHHH
Confidence            344456677888776633    445666666666665543333333122222222111   1  1222444445667779


Q ss_pred             HhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCCCCCCC
Q 019344          254 LKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLNP  312 (342)
Q Consensus       254 ~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~  312 (342)
                      +++.+.....+.....|+..+++++++++++.+..++.+..++.+|+.+....+.++++
T Consensus        85 l~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~  143 (303)
T PF08449_consen   85 LKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSS  143 (303)
T ss_pred             HHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccc
Confidence            99999999899999999999999999999999999999999999999999887654443

; GO: 0055085 transmembrane transport

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.75  E-value=0.0012  Score=49.28  Aligned_cols=72  Identities=15%  Similarity=0.179  Sum_probs=59.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccchhHHHHh-hhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhhe
Q 019344           81 WYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVL  152 (342)
Q Consensus        81 ~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~  152 (342)
                      +......-+....++.+...++++.|.+.+..+ ....-+.+.+++.+++||++++.+++++.+.+.|++.+-
T Consensus        35 ~~~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         35 KIYGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            333444444555558888999999999998755 578889999999999999999999999999999998863

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.74  E-value=0.00083  Score=50.30  Aligned_cols=69  Identities=17%  Similarity=0.273  Sum_probs=58.8

Q ss_pred             HHHHHHHHHHHHHHHhhccchhHHHHh-hhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecC
Q 019344           87 LGFVDVQGNFLVNKAYQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (342)
Q Consensus        87 ~g~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  155 (342)
                      .-+.....+.+...++++.|.+.+..+ ....-+.+.+++++++||++++.+++|+.+.++|++.+-..+
T Consensus        36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            333344447888999999999999876 568999999999999999999999999999999999986644

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.73  E-value=0.00055  Score=51.27  Aligned_cols=66  Identities=9%  Similarity=0.146  Sum_probs=50.3

Q ss_pred             HHHHHHHHHHHHHhhhhhHH-HHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCC
Q 019344          242 SSFMFYTLAPFVLKLSGATM-FNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTE  307 (342)
Q Consensus       242 ~~~~~~~~~~~~~~~~~a~~-~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  307 (342)
                      +....+.++..++++.+... .+...-+..+...+.++++|+|++++.+++|+.++++|+++.+...
T Consensus        39 ~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            44444566677777766553 3333445668889999999999999999999999999999987644

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.72  E-value=0.00096  Score=48.96  Aligned_cols=72  Identities=21%  Similarity=0.165  Sum_probs=60.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccchhHHHHh-hhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecC
Q 019344           84 YLLLGFVDVQGNFLVNKAYQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (342)
Q Consensus        84 ~~~~g~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  155 (342)
                      .++.-+....++.+...|+++.|.+.+..+ ...-.+.+++.+++++||++++.+++++.+.++|++.+-..+
T Consensus        33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s  105 (106)
T COG2076          33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS  105 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence            444444555558888999999999998754 688899999999999999999999999999999999876543

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.71  E-value=0.00041  Score=51.40  Aligned_cols=71  Identities=20%  Similarity=0.084  Sum_probs=59.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccchhHHHHh-hhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheec
Q 019344           84 YLLLGFVDVQGNFLVNKAYQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLS  154 (342)
Q Consensus        84 ~~~~g~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~  154 (342)
                      .+..-+....++.+...+++..|.+.+..+ .....+.+.+++.+++||++++.+++++.+.+.|++.+-..
T Consensus        32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~  103 (105)
T PRK11431         32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLS  103 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence            334444445558888999999999998755 46899999999999999999999999999999999987543

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.57  E-value=0.00075  Score=60.26  Aligned_cols=122  Identities=13%  Similarity=0.072  Sum_probs=80.2

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhhhcccccccccchhHHHHHHHHHHHH
Q 019344          164 SRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASS  243 (342)
Q Consensus       164 ~~~~~G~~l~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (342)
                      .+..+|..+++.++++.+....++|+-..+.+....-.-....        -+.      ..  +.|+.     |.. ..
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~~~~--------~~l------~~--~~W~~-----G~~-~~   60 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGSGGR--------SYL------RR--PLWWI-----GLL-LM   60 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhh--------HHH------hh--HHHHH-----HHH-HH
Confidence            5678999999999999999999999876554331100000000        000      00  01111     111 11


Q ss_pred             HHHHHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCC
Q 019344          244 FMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTE  307 (342)
Q Consensus       244 ~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  307 (342)
                      .....+...++...++..+.....+.-++..+++..+++|+++..++.|+++++.|..+.....
T Consensus        61 ~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~  124 (300)
T PF05653_consen   61 VLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA  124 (300)
T ss_pred             hcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence            1122333346667777777777777889999999999999999999999999999998776544

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.56  E-value=0.0052  Score=48.17  Aligned_cols=131  Identities=14%  Similarity=0.103  Sum_probs=87.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCC-hHHHHHHHHHHHHHHHHHHHHhhhcccccccccchhHHHHHHHHHHHHHHHH
Q 019344          169 GDVLVIAGTIFFATSNVGEEFFVKKKD-RVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFY  247 (342)
Q Consensus       169 G~~l~l~aa~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (342)
                      ..++++.+...-++...++.++.++.. |.......+..+.+...+.....+..+.+... +. .+..+++-. .+..+.
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~-~~-p~w~~lGG~-lG~~~V   78 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLS-SV-PWWAYLGGL-LGVFFV   78 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhc-cC-ChHHhccHH-HHHHHH
Confidence            357889999999999999999988865 88888888888888776555555543322221 11 112222222 233333


Q ss_pred             HHHHHHHhhhhhHHHH-hHhhhHHHHHHHHHHH----HhcccccHHHHHHHHHHHHHHHh
Q 019344          248 TLAPFVLKLSGATMFN-LSLLTADMWAVVFRIC----FYHQKVDWLYFLAFGIVVIGLII  302 (342)
Q Consensus       248 ~~~~~~~~~~~a~~~~-~~~~~~pv~~~~~~~~----~~~e~~~~~~~~G~~li~~g~~l  302 (342)
                      ........+.++.... .....+-+.+.++|.+    .-++++++.+++|.+++++|+++
T Consensus        79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            5555566777776544 4444677778888886    23578999999999999999864

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.45  E-value=0.0019  Score=47.48  Aligned_cols=66  Identities=9%  Similarity=0.145  Sum_probs=52.3

Q ss_pred             HHHHHHHHHHHHHhhhhhH-HHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCC
Q 019344          242 SSFMFYTLAPFVLKLSGAT-MFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTE  307 (342)
Q Consensus       242 ~~~~~~~~~~~~~~~~~a~-~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  307 (342)
                      +....|.+...++++.+.. ..++..-...+.+.+.++++|+|+.++.+++|..++++|+...+...
T Consensus        39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s  105 (106)
T COG2076          39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS  105 (106)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence            4444567777788886655 44555556778899999999999999999999999999999877643

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.45  E-value=0.0066  Score=45.28  Aligned_cols=63  Identities=6%  Similarity=0.086  Sum_probs=49.6

Q ss_pred             HHHHHHHHHHHHHhhhhhH-HHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhc
Q 019344          242 SSFMFYTLAPFVLKLSGAT-MFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYS  304 (342)
Q Consensus       242 ~~~~~~~~~~~~~~~~~a~-~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~  304 (342)
                      +....+.+...++++.+.. ..++..-+..+.+.+.++++|+|++++.+++|+.+++.|++..+
T Consensus        44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            4444566777788876655 44455556668899999999999999999999999999998764

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=97.38  E-value=0.093  Score=46.91  Aligned_cols=283  Identities=12%  Similarity=0.116  Sum_probs=155.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHh----------hhhhhHHHHHHHHHHHHHH
Q 019344           23 LFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYR----------RQRLRVAWYWYLLLGFVDV   92 (342)
Q Consensus        23 ~~~~~~~al~~~~~~~~~~~~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~g~~~~   92 (342)
                      +++|++...+-+...-+.-...+|-..-+++..+.-..+..-+..|+..-.          +...........+.|++..
T Consensus         5 ii~Gii~h~iGg~~~~sfy~P~kkvk~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~lWG   84 (344)
T PF06379_consen    5 IILGIIFHAIGGFASGSFYVPFKKVKGWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGVLWG   84 (344)
T ss_pred             HHHHHHHHHHHHHHhhhhccchhhcCCccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHHHHh
Confidence            444544433333332222223443333355555544444444445544311          1222346677889999999


Q ss_pred             HHHHHHHHHhhccchhHHH-HhhhhhHHHHHHHHHHHhcc-------cchHHHHHHHHHHHhhhhhheecCC----C-CC
Q 019344           93 QGNFLVNKAYQFSSITSVT-LLDCCTIAWAIVLTWLFLGT-------RYSLWQLLGAALCVLGLGLVLLSDA----G-GD  159 (342)
Q Consensus        93 ~~~~~~~~al~~~~~~~~~-ii~~~~pi~~~il~~l~l~e-------~~~~~~~~g~~l~~~Gv~l~~~~~~----~-~~  159 (342)
                      ++...+-.+++|++.+..+ +...+..++-.++--++.++       +-....++|++++++|+.+......    . ..
T Consensus        85 IGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~~~~~  164 (344)
T PF06379_consen   85 IGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEKELGE  164 (344)
T ss_pred             cchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhhhhcc
Confidence            9999999999999998875 66677777777776665442       2235679999999999999876432    1 11


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHHHHHhh--------ccCChHHHH----HHHHHHHHHHHHHHHHhh--hcccc--
Q 019344          160 GGGGSRPLLGDVLVIAGTIFFATSNVGEEFFV--------KKKDRVEVV----CMIGVYGLLVSAVQLSIL--ELKSL--  223 (342)
Q Consensus       160 ~~~~~~~~~G~~l~l~aa~~~a~~~v~~~~~~--------~~~~~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~--  223 (342)
                      +..+.+..+|.++++.+.+..|.+++-.+.-.        ...+|....    .....-+.+..++-....  ...+.  
T Consensus       165 ~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~yc~~~l~~~k~~s~  244 (344)
T PF06379_consen  165 EAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLIYCLILLAKNKNWSW  244 (344)
T ss_pred             chhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHHHHHHHHhhcCCCcc
Confidence            12334557999999999999999888654311        012222111    111123334443222221  11111  


Q ss_pred             -ccccc-ch--hHHHHHHH-HHHHHHHHHHHHHHHHhhhhhH----HHHhHhhhHHHHHHHHHHHHhcc------cccHH
Q 019344          224 -ESVEW-ST--NILLGFAG-YAASSFMFYTLAPFVLKLSGAT----MFNLSLLTADMWAVVFRICFYHQ------KVDWL  288 (342)
Q Consensus       224 -~~~~~-~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~----~~~~~~~~~pv~~~~~~~~~~~e------~~~~~  288 (342)
                       ...+. ..  .....+.. ....-+..+.+|..+-.+.++.    --.+.+.+..+++-+++.+. +|      +.-..
T Consensus       245 ~~d~~~~~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~l-kEWKg~s~kt~~v  323 (344)
T PF06379_consen  245 KGDYSVAKPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLIL-KEWKGASKKTIRV  323 (344)
T ss_pred             ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHHH-HHhccCCcccHHH
Confidence             11110 11  11122211 1224444555555555555533    33345556667777777764 54      23346


Q ss_pred             HHHHHHHHHHHHHhhccC
Q 019344          289 YFLAFGIVVIGLIIYSTT  306 (342)
Q Consensus       289 ~~~G~~li~~g~~l~~~~  306 (342)
                      .++|.++++.++.+.-+.
T Consensus       324 l~~G~~vlI~s~~ivG~G  341 (344)
T PF06379_consen  324 LVLGIAVLILSVVIVGYG  341 (344)
T ss_pred             HHHHHHHHHHHHHHHhcc
Confidence            788999988888776543

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.38  E-value=0.0029  Score=46.87  Aligned_cols=65  Identities=12%  Similarity=0.149  Sum_probs=50.7

Q ss_pred             HHHHHHHHHHHHHhhhhhH-HHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccC
Q 019344          242 SSFMFYTLAPFVLKLSGAT-MFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTT  306 (342)
Q Consensus       242 ~~~~~~~~~~~~~~~~~a~-~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  306 (342)
                      +....+.+...++++.+.. ..++..-+..+.+.+.++++|+|++++.+++|+.+++.|++..+..
T Consensus        38 ~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~  103 (105)
T PRK11431         38 AMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLS  103 (105)
T ss_pred             HHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence            4444566677777776655 4445555667889999999999999999999999999999887543

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.35  E-value=0.01  Score=46.47  Aligned_cols=124  Identities=18%  Similarity=0.177  Sum_probs=84.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhh-hh---hHHHHHHHHHHHHHHHHHHHHHHH
Q 019344           26 GQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQ-RL---RVAWYWYLLLGFVDVQGNFLVNKA  101 (342)
Q Consensus        26 ~~~~al~~~~~~~~~~~~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~g~~~~~~~~~~~~a  101 (342)
                      +.....+.+........+.++ ..+|+.-+++.+....+.+..+....++ +.   ++..+++..-|+++.....+...+
T Consensus         6 a~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~lGG~lG~~~V~~~~~~   84 (138)
T PF04657_consen    6 ALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYLGGLLGVFFVLSNIIL   84 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhccHHHHHHHHHHHHHH
Confidence            333334444443333333333 3368999989998887666555543332 22   333345566888888888889999


Q ss_pred             hhccchhHHHHh-hhhhHHHHHHHHHH----HhcccchHHHHHHHHHHHhhhhh
Q 019344          102 YQFSSITSVTLL-DCCTIAWAIVLTWL----FLGTRYSLWQLLGAALCVLGLGL  150 (342)
Q Consensus       102 l~~~~~~~~~ii-~~~~pi~~~il~~l----~l~e~~~~~~~~g~~l~~~Gv~l  150 (342)
                      .+..+++.+..+ ..-+-+...++.++    .-|+++++.+.+|+.+.++|+.+
T Consensus        85 vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   85 VPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            999999998755 46666667777775    35788999999999999999864

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.22  E-value=0.024  Score=44.54  Aligned_cols=139  Identities=10%  Similarity=0.041  Sum_probs=82.7

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhccCC-hHHHHHHHHHHHHHHHHHHHHhhhcccccccccchhHHHHHHHHHHHHH
Q 019344          166 PLLGDVLVIAGTIFFATSNVGEEFFVKKKD-RVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSF  244 (342)
Q Consensus       166 ~~~G~~l~l~aa~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (342)
                      .....+.++.+..+-.+..-++.++.+..+ |.......+..|.+...+...+.+.........+...+...-|.. ...
T Consensus         3 ~~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~l-Ga~   81 (150)
T COG3238           3 MYLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLL-GAI   81 (150)
T ss_pred             cHHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccch-hhh
Confidence            345678889999999999999998877755 655556666676666554444433322222111111122222211 111


Q ss_pred             HHHHHHHHHHhhhhhH-HHHhHhhhHHHHHHHHHHHHhc----ccccHHHHHHHHHHHHHHHhhccC
Q 019344          245 MFYTLAPFVLKLSGAT-MFNLSLLTADMWAVVFRICFYH----QKVDWLYFLAFGIVVIGLIIYSTT  306 (342)
Q Consensus       245 ~~~~~~~~~~~~~~a~-~~~~~~~~~pv~~~~~~~~~~~----e~~~~~~~~G~~li~~g~~l~~~~  306 (342)
                      . -..-.....+.++. .......-+-+.+.+.|.+=+.    .+++...++|.+++++|+++.++.
T Consensus        82 ~-vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~  147 (150)
T COG3238          82 F-VTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF  147 (150)
T ss_pred             h-hhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence            1 12223334444444 4445555677778888877544    678999999999999997666554

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.21  E-value=0.011  Score=53.49  Aligned_cols=141  Identities=13%  Similarity=0.064  Sum_probs=84.4

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHH-HHHHHHHHHH-HHhhhc---ccccccccchhHHHHHHH
Q 019344          164 SRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIG-VYGLLVSAVQ-LSILEL---KSLESVEWSTNILLGFAG  238 (342)
Q Consensus       164 ~~~~~G~~l~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~  238 (342)
                      .+...|+++.++++++++...+-.|+ .|+-+ .+...... ++..++.... -.+..+   +...+.+........+.|
T Consensus         3 ~~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~-wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G   80 (345)
T PRK13499          3 NAIILGIIWHLIGGASSGSFYAPFKK-VKKWS-WETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFG   80 (345)
T ss_pred             chhHHHHHHHHHHHHHhhcccccccc-cCCCc-hhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHH
Confidence            35678999999999999999998888 44433 22221111 2222221100 111111   111222222222223223


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhHHH-HhHhhhHHHHHHHHHHHHhcccc---c----HHHHHHHHHHHHHHHhhccCCC
Q 019344          239 YAASSFMFYTLAPFVLKLSGATMF-NLSLLTADMWAVVFRICFYHQKV---D----WLYFLAFGIVVIGLIIYSTTEK  308 (342)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~a~~~-~~~~~~~pv~~~~~~~~~~~e~~---~----~~~~~G~~li~~g~~l~~~~~~  308 (342)
                      .  .-...+..+..++++.+.... ++..-++-+.+.+++.+++||..   +    ..-++|.+++++|+.+..+.-.
T Consensus        81 ~--~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~  156 (345)
T PRK13499         81 A--LWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ  156 (345)
T ss_pred             H--HHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence            2  344456777778888777644 34444777999999999999765   2    3578899999999999998543

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=97.15  E-value=0.003  Score=54.53  Aligned_cols=132  Identities=17%  Similarity=0.121  Sum_probs=69.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhhhcccccccccchhHHHHHHHHHHHHHHHHH
Q 019344          169 GDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYT  248 (342)
Q Consensus       169 G~~l~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (342)
                      |.+.++.|+++++-..+=.|+. +..|......+++....+...+.....+.   +.+.+..    ++-|.  ....++.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~-~~gDg~~fQw~~~~~i~~~g~~v~~~~~~---p~f~p~a----mlgG~--lW~~gN~   70 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKF-DTGDGFFFQWVMCSGIFLVGLVVNLILGF---PPFYPWA----MLGGA--LWATGNI   70 (254)
T ss_pred             CchhHHHHHHHhcccceeeEec-cCCCcHHHHHHHHHHHHHHHHHHHHhcCC---CcceeHH----Hhhhh--hhhcCce
Confidence            5677889999999988877765 34566666666654444444333333222   2221111    11111  1111122


Q ss_pred             HHHHHHhhhhhHHHHh-HhhhHHHHHHHHHHH-Hhcccc-----cHHHHHHHHHHHHHHHhhccCCCCC
Q 019344          249 LAPFVLKLSGATMFNL-SLLTADMWAVVFRIC-FYHQKV-----DWLYFLAFGIVVIGLIIYSTTEKDL  310 (342)
Q Consensus       249 ~~~~~~~~~~a~~~~~-~~~~~pv~~~~~~~~-~~~e~~-----~~~~~~G~~li~~g~~l~~~~~~~~  310 (342)
                      +..-+++..+-...-+ ....+-+.+...+-+ +||+++     ++..++|.+++++|..++..-|.+.
T Consensus        71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~  139 (254)
T PF07857_consen   71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE  139 (254)
T ss_pred             eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence            2223444444443322 222333445554433 455433     4579999999999999887755444

The region concerned is approximately 280 residues long.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.15  E-value=0.0019  Score=46.93  Aligned_cols=55  Identities=16%  Similarity=0.148  Sum_probs=32.9

Q ss_pred             HHHHHHHHHHHHhhccchhHHHHh-hhhhHHHHHHHHHHHhcccchHHHHHHHHHH
Q 019344           90 VDVQGNFLVNKAYQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRYSLWQLLGAALC  144 (342)
Q Consensus        90 ~~~~~~~~~~~al~~~~~~~~~ii-~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~  144 (342)
                      .......++..++++.|.+.+..+ ..+..+.+.+.+.+++||++++.++.|+.+.
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            444457889999999999999765 4799999999999999999999999998763

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.08  E-value=0.0059  Score=52.91  Aligned_cols=69  Identities=12%  Similarity=0.218  Sum_probs=60.4

Q ss_pred             HHHHHHHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCCCCC
Q 019344          242 SSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDL  310 (342)
Q Consensus       242 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~  310 (342)
                      .....+.+.+.++++.++....+...++.+++.++++++++.+++..||.+..++.+|+.+.+......
T Consensus        26 lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   26 LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            344445666678999999999999999999999999999999999999999999999999988866444

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.72  E-value=0.0053  Score=45.89  Aligned_cols=68  Identities=18%  Similarity=0.298  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccchhHHHHh-hhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhh
Q 019344           84 YLLLGFVDVQGNFLVNKAYQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLV  151 (342)
Q Consensus        84 ~~~~g~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~  151 (342)
                      +.+-=.++..+...+++.+...+.+.+..+ +++.=++|++.++++.+|..+++.++|+.+.+.|+.+.
T Consensus        44 y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   44 YIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            344445566668999999999999999877 59999999999988777778889999999999998764

Many members are annotated as potential transmembrane proteins.

>TIGR00803 nst UDP-galactose transporter

Probab=96.56  E-value=0.033  Score=47.54  Aligned_cols=67  Identities=18%  Similarity=0.298  Sum_probs=58.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhh
Q 019344           84 YLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGL  150 (342)
Q Consensus        84 ~~~~g~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l  150 (342)
                      .....+.......+....++|.+....++...+.++++.+++.++++|+++..+++|..+.+.|+.+
T Consensus       155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            4444555666677889999999999999999999999999999999999999999999999988754

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=96.51  E-value=0.0026  Score=54.25  Aligned_cols=80  Identities=20%  Similarity=0.381  Sum_probs=72.2

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheec
Q 019344           75 QRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLS  154 (342)
Q Consensus        75 ~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~  154 (342)
                      +..+++|+.+..+|+.+++++.+...++|.-.++-.+++.++.-++..+.-.+++++.++++.|.|.++.+...+.+...
T Consensus       247 P~cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~  326 (346)
T KOG4510|consen  247 PHCGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALK  326 (346)
T ss_pred             CccccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHH
Confidence            34477888899999999999999999999999999999999999999999999999999999999998887776666553

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.40  E-value=0.054  Score=39.30  Aligned_cols=55  Identities=9%  Similarity=0.130  Sum_probs=30.5

Q ss_pred             HHHHHHHHHHHHHhhhhhHHH-HhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHH
Q 019344          242 SSFMFYTLAPFVLKLSGATMF-NLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIV  296 (342)
Q Consensus       242 ~~~~~~~~~~~~~~~~~a~~~-~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li  296 (342)
                      +....+.++..++++.+...+ ++..-+..+...+.+.++|||++++.++.|..+|
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            444555777888888776644 4444567789999999999999999999999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=96.16  E-value=0.021  Score=51.05  Aligned_cols=136  Identities=16%  Similarity=0.146  Sum_probs=95.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCchHHHHHHHHHHHHHHHH-HHHHHhhh---------hhhHHHHHHHHH
Q 019344           20 LYLLFLGQLVSFTLALMSFTSSLIAD--LGVDAPVTQSAFAYFSLALVYG-GVLLYRRQ---------RLRVAWYWYLLL   87 (342)
Q Consensus        20 ~~~~~~~~~~al~~~~~~~~~~~~~~--~~~~~p~~~~~~r~~~~~~~~~-~~~~~~~~---------~~~~~~~~~~~~   87 (342)
                      +.|+..+....+..+.-....+.+..  +...+++.......-.+...++ |+......         ...-........
T Consensus       162 ~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (316)
T KOG1441|consen  162 LFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLN  241 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHH
Confidence            44565555555555554444444443  2345577777665566666666 76553221         111223344555


Q ss_pred             HHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecC
Q 019344           88 GFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (342)
Q Consensus        88 g~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  155 (342)
                      +++....|...|..++++++-..++.....=+++...++++++++.++.+..|..++++|+.+-..-.
T Consensus       242 sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k  309 (316)
T KOG1441|consen  242 SVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAK  309 (316)
T ss_pred             HHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHh
Confidence            56666668899999999999999999999999999999999999999999999999999999876644

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=95.98  E-value=0.084  Score=47.55  Aligned_cols=140  Identities=19%  Similarity=0.156  Sum_probs=101.1

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCc-hHHHHHHHHHHHHHHHHHHHH----Hhhhh--h--hHHHHHH
Q 019344           16 TLRTLYLLFLGQLVSFTLALMSFTSSLIADLG--VDA-PVTQSAFAYFSLALVYGGVLL----YRRQR--L--RVAWYWY   84 (342)
Q Consensus        16 ~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~--~~~-p~~~~~~r~~~~~~~~~~~~~----~~~~~--~--~~~~~~~   84 (342)
                      ..|.+.|-+++++.|++.++.....+.-..+.  ..+ +.++- +--++..+++||.++    .++++  +  ..+.-..
T Consensus       242 a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffG-fvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~v  320 (416)
T KOG2765|consen  242 ASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFG-FVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLV  320 (416)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHH-HHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEee
Confidence            35678888888888888888777766555432  222 33333 223444666665543    22222  1  2344456


Q ss_pred             HHHHHHHHHH-HHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecCC
Q 019344           85 LLLGFVDVQG-NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDA  156 (342)
Q Consensus        85 ~~~g~~~~~~-~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~~  156 (342)
                      ++.++++.+. .+++..|.-.+++-.+++-.+++....++.-.++.++++++..++|.+..++|.+++...+.
T Consensus       321 v~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  321 VFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             eHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence            7777777777 99999999999999999888888887888888888899999999999999999999988764

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=95.51  E-value=0.26  Score=43.25  Aligned_cols=137  Identities=14%  Similarity=0.041  Sum_probs=92.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhh---------hhhhHHHHHHHHHH
Q 019344           18 RTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRR---------QRLRVAWYWYLLLG   88 (342)
Q Consensus        18 ~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~g   88 (342)
                      +...|+.+...-.++=+.....=..++.+...+++.+.+.--++..+.-........         +..++.++.+++.+
T Consensus       169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s  248 (327)
T KOG1581|consen  169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYS  248 (327)
T ss_pred             CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHH
Confidence            344454443333222233333333455554555666665555555544444333111         12256778899999


Q ss_pred             HHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheec
Q 019344           89 FVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLS  154 (342)
Q Consensus        89 ~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~  154 (342)
                      .++..++.+.++-++.-++-.-+.+..+-=++..+++.+.++.++++.||+|+.+.+.|+.+=...
T Consensus       249 ~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~  314 (327)
T KOG1581|consen  249 TCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILL  314 (327)
T ss_pred             HhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHH
Confidence            999999888888888777777777788888999999999999999999999999999998875543

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.49  E-value=0.1  Score=39.09  Aligned_cols=109  Identities=9%  Similarity=0.077  Sum_probs=63.0

Q ss_pred             HHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 019344          175 AGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVL  254 (342)
Q Consensus       175 ~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (342)
                      +.++.|+..+-+.|+-.++.++..-.. +..-....     .+.          ++...+.+.....++..    ++..+
T Consensus         3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~~-~~~~~~~~-----Ll~----------n~~y~ipf~lNq~GSv~----f~~~L   62 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGSSGLEKVKASL-QLLQEIKF-----LLL----------NPKYIIPFLLNQSGSVL----FFLLL   62 (113)
T ss_pred             eehHHhcCchHHHHHHHhhcCCccchH-HHHHHHHH-----HHH----------hHHHHHHHHHHHHHHHH----HHHHH
Confidence            456788999999998876644333221 11111111     001          11122222222213333    33345


Q ss_pred             hhhhhH-HHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhh
Q 019344          255 KLSGAT-MFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIY  303 (342)
Q Consensus       255 ~~~~a~-~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~  303 (342)
                      .+.+-+ .+.+.+.+.=+++++.++++.+|..+...++|+.+++.|+.+.
T Consensus        63 ~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   63 GSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             hcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            554433 3344455666999999998888888999999999999998753

Many members are annotated as potential transmembrane proteins.

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=95.39  E-value=0.0081  Score=50.73  Aligned_cols=132  Identities=12%  Similarity=0.095  Sum_probs=80.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhhhcccccccccchhHHHHHHHHHHHHHHHHH
Q 019344          169 GDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYT  248 (342)
Q Consensus       169 G~~l~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (342)
                      +.+++++=++.|+..-....|.  +.+|..-.....+-+.+++. ..+.+..   +..++.... ..+.+-. .....+.
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~--GG~p~qQ~lGtT~GALifai-iv~~~~~---p~~T~~~~i-v~~isG~-~Ws~GQ~   74 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKF--GGKPYQQTLGTTLGALIFAI-IVFLFVS---PELTLTIFI-VGFISGA-FWSFGQA   74 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeec--CCChhHhhhhccHHHHHHHH-HHheeec---CccchhhHH-HHHHhhh-Hhhhhhh
Confidence            4678889999999887766663  23344433333244444443 3333322   222222222 2222222 3333456


Q ss_pred             HHHHHHhhhhhHHHH-hHhhhHHHHHHHHHHHHhcccccHHHH----HHHHHHHHHHHhhccCCC
Q 019344          249 LAPFVLKLSGATMFN-LSLLTADMWAVVFRICFYHQKVDWLYF----LAFGIVVIGLIIYSTTEK  308 (342)
Q Consensus       249 ~~~~~~~~~~a~~~~-~~~~~~pv~~~~~~~~~~~e~~~~~~~----~G~~li~~g~~l~~~~~~  308 (342)
                      ...++.+..+...+. +..-.+-+-+.+++++.|||..+..++    +..++++.|+++..+.++
T Consensus        75 ~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~  139 (288)
T COG4975          75 NQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR  139 (288)
T ss_pred             hhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence            677788887776544 444477788999999999999998764    466788889988877654

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=95.31  E-value=0.061  Score=45.23  Aligned_cols=76  Identities=16%  Similarity=0.225  Sum_probs=68.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhhee
Q 019344           78 RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLL  153 (342)
Q Consensus        78 ~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~  153 (342)
                      +..|+.+.++++.+..++++.+.-..+-++-.-+++..+--.|+.+.++++++.+++.+||+|..+.+.|...=..
T Consensus       238 P~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  238 PYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVV  313 (337)
T ss_pred             cHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence            4577888999999999999999999999998899999999999999999999999999999999999988776444

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.06  E-value=1.3  Score=34.91  Aligned_cols=129  Identities=16%  Similarity=0.159  Sum_probs=80.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhhh--h---hHHHHHHHHHHHHHHHHHHH
Q 019344           23 LFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR--L---RVAWYWYLLLGFVDVQGNFL   97 (342)
Q Consensus        23 ~~~~~~~al~~~~~~~~~~~~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~g~~~~~~~~~   97 (342)
                      ++++.....+...-.....-+.+ ...+|..-.+..+.....++..+.+.+.++  .   ++..++...-|+++...-+.
T Consensus         7 ll~~i~aG~~l~~Q~~iN~qL~~-~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~~vt~   85 (150)
T COG3238           7 LLFAILAGALLPLQAAINGRLAR-YLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAIFVTS   85 (150)
T ss_pred             HHHHHHHhhhhhhHHHHHHHHHH-HcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhhhhhh
Confidence            34444444444444433333333 345788888888888766555554433222  1   23345566777777777667


Q ss_pred             HHHHhhccchhHHH-HhhhhhHHHHHHHHHHHh----cccchHHHHHHHHHHHhhhhhhe
Q 019344           98 VNKAYQFSSITSVT-LLDCCTIAWAIVLTWLFL----GTRYSLWQLLGAALCVLGLGLVL  152 (342)
Q Consensus        98 ~~~al~~~~~~~~~-ii~~~~pi~~~il~~l~l----~e~~~~~~~~g~~l~~~Gv~l~~  152 (342)
                      ........+++... ++..-+-+...++-.+=.    +++++..+.+|+.+.++|++++-
T Consensus        86 s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238          86 SILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             hHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence            77777888777765 445667776777666533    36789999999999999955443

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=93.95  E-value=1.4  Score=39.57  Aligned_cols=145  Identities=13%  Similarity=0.101  Sum_probs=77.6

Q ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhhhcccc----cccccchhHHHHHHHH
Q 019344          164 SRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSL----ESVEWSTNILLGFAGY  239 (342)
Q Consensus       164 ~~~~~G~~l~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~  239 (342)
                      ..-..|+++..+++++.+.+.+-.||. |+-+=..+=..+.+++.++.........-++.    .+.+.+......+.+.
T Consensus         3 ~~ii~Gii~h~iGg~~~~sfy~P~kkv-k~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~   81 (344)
T PF06379_consen    3 SAIILGIIFHAIGGFASGSFYVPFKKV-KGWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV   81 (344)
T ss_pred             chHHHHHHHHHHHHHHhhhhccchhhc-CCccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence            455789999999999999998888774 44332222222334444443211222222222    1222222222333333


Q ss_pred             HHHHHHHHHHHHHHHhhhhhHHHH-hHhhhHHHHHHHHHHHHhc-------ccccHHHHHHHHHHHHHHHhhccCCCCCC
Q 019344          240 AASSFMFYTLAPFVLKLSGATMFN-LSLLTADMWAVVFRICFYH-------QKVDWLYFLAFGIVVIGLIIYSTTEKDLN  311 (342)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~pv~~~~~~~~~~~-------e~~~~~~~~G~~li~~g~~l~~~~~~~~~  311 (342)
                      .  -...-..+-.++++.+..... +..=+..+++.++--++.+       ++-....++|.++.++|+.+..+.-.+|+
T Consensus        82 l--WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke  159 (344)
T PF06379_consen   82 L--WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKE  159 (344)
T ss_pred             H--HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhh
Confidence            2  222235556677776665332 2222333555555444433       23345789999999999999887654433

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=93.73  E-value=0.054  Score=47.75  Aligned_cols=130  Identities=15%  Similarity=0.110  Sum_probs=84.3

Q ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhhhcccccccccchhHHHHHHHHHH
Q 019344          162 GGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAA  241 (342)
Q Consensus       162 ~~~~~~~G~~l~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (342)
                      ...++.+|..+++.+.+..+...++.|+..++......-+-..-.              ..+.+  +.||.     |.. 
T Consensus        15 ~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~ra~~gg~--------------~yl~~--~~Ww~-----G~l-   72 (335)
T KOG2922|consen   15 MSSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGASGLRAGEGGY--------------GYLKE--PLWWA-----GML-   72 (335)
T ss_pred             hccCceeeeeehhhccEEEeeehhhhHHHHHHHhhhcccccCCCc--------------chhhh--HHHHH-----HHH-
Confidence            346788999999999999999999888866553221100000000              00011  11222     111 


Q ss_pred             HHHHHHHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCCCCCCCC
Q 019344          242 SSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLNPM  313 (342)
Q Consensus       242 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~~  313 (342)
                      .+..+-...+.+....++..++....+..+++.+++..+++|++++...+|+++.++|..+......++++.
T Consensus        73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i  144 (335)
T KOG2922|consen   73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEI  144 (335)
T ss_pred             HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccccc
Confidence            222222333334556677777777778889999999999999999999999999999998887765555443

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=93.72  E-value=0.099  Score=45.08  Aligned_cols=137  Identities=15%  Similarity=0.124  Sum_probs=91.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhh--------hhh--hHHHHHHHH
Q 019344           17 LRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRR--------QRL--RVAWYWYLL   86 (342)
Q Consensus        17 ~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~--------~~~--~~~~~~~~~   86 (342)
                      .--+.|+++|...++..+......+....+-.+.-+.++++....+.++++|.+....        +..  ...|..+.+
T Consensus       181 ~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtL  260 (347)
T KOG1442|consen  181 TLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTL  260 (347)
T ss_pred             ccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHH
Confidence            3457799999888877766665555333322334577888888888888888776322        111  235566677


Q ss_pred             HHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhhee
Q 019344           87 LGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLL  153 (342)
Q Consensus        87 ~g~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~  153 (342)
                      .|++++..++...+=++.+++-.-.+=.......-.+++..+++|..+...|-+.++.+.|...-+.
T Consensus       261 sglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~  327 (347)
T KOG1442|consen  261 SGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTL  327 (347)
T ss_pred             HHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHH
Confidence            7777777765555555555554444433444555668899999999999999888888888777665

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=93.24  E-value=6.2  Score=35.67  Aligned_cols=61  Identities=13%  Similarity=0.239  Sum_probs=54.9

Q ss_pred             HHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCCC
Q 019344          248 TLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEK  308 (342)
Q Consensus       248 ~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  308 (342)
                      -+.+.+..+.++........+..+.+.++..++++++++..||...++...|+.+.+....
T Consensus       107 nl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~  167 (345)
T KOG2234|consen  107 NLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSL  167 (345)
T ss_pred             hHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCC
Confidence            3566688899999999999999999999999999999999999999999999999995443

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=93.20  E-value=2.9  Score=36.34  Aligned_cols=75  Identities=16%  Similarity=0.140  Sum_probs=56.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHH-HHHHH-Hhccc-----chHHHHHHHHHHHhhhhhh
Q 019344           79 VAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAI-VLTWL-FLGTR-----YSLWQLLGAALCVLGLGLV  151 (342)
Q Consensus        79 ~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~-il~~l-~l~e~-----~~~~~~~g~~l~~~Gv~l~  151 (342)
                      +-..+-++.|.+...+|.+..-.++.++.+....+.++.-+.+- ..+++ +++++     -++..++|++++++|..+.
T Consensus        53 ~f~p~amlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f  132 (254)
T PF07857_consen   53 PFYPWAMLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIF  132 (254)
T ss_pred             cceeHHHhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHhe
Confidence            34556677888888889999999999999999998877555554 44443 33332     3577899999999999987


Q ss_pred             ee
Q 019344          152 LL  153 (342)
Q Consensus       152 ~~  153 (342)
                      ..
T Consensus       133 ~f  134 (254)
T PF07857_consen  133 SF  134 (254)
T ss_pred             ee
Confidence            76

The region concerned is approximately 280 residues long.

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=92.25  E-value=1.8  Score=38.49  Aligned_cols=76  Identities=13%  Similarity=0.106  Sum_probs=65.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecC
Q 019344           80 AWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (342)
Q Consensus        80 ~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  155 (342)
                      .+-.+.+.++++++.+++.+++.+..++...++.....-..+.+...++.+++.++...+|+.++++|-++-....
T Consensus       227 ~~~~~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~  302 (314)
T KOG1444|consen  227 VLVVMLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYAT  302 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhh
Confidence            3566788888888889999999999999999988877777788888888889999999999999999998877654

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=90.45  E-value=9.8  Score=33.78  Aligned_cols=130  Identities=16%  Similarity=0.129  Sum_probs=77.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcC---CCchHHHHHHHHHHHHHHHHHHHH-Hhh------------hhhhHHHHHH-
Q 019344           22 LLFLGQLVSFTLALMSFTSSLIADLG---VDAPVTQSAFAYFSLALVYGGVLL-YRR------------QRLRVAWYWY-   84 (342)
Q Consensus        22 ~~~~~~~~al~~~~~~~~~~~~~~~~---~~~p~~~~~~r~~~~~~~~~~~~~-~~~------------~~~~~~~~~~-   84 (342)
                      |.++-...+++.+.=+...+.+.++.   ..+|....+.---...+.+++..+ ..+            ......++.. 
T Consensus       165 Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g  244 (349)
T KOG1443|consen  165 GFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIG  244 (349)
T ss_pred             hHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHH
Confidence            45555555565555555566776653   244665553333333333333332 111            1111122322 


Q ss_pred             --HHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhh
Q 019344           85 --LLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLV  151 (342)
Q Consensus        85 --~~~g~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~  151 (342)
                        .+.|.+.+..-..-+.=+..++.-..++..-..-+.+.+++..+++++++...|.|..++..|+..-
T Consensus       245 ~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  245 LISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence              2333333333333355556666666677777778889999999999999999999999999999987

>PRK02237 hypothetical protein; Provisional

Probab=89.41  E-value=4.3  Score=29.90  Aligned_cols=41  Identities=7%  Similarity=0.115  Sum_probs=35.8

Q ss_pred             hHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCCC
Q 019344          268 TADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEK  308 (342)
Q Consensus       268 ~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  308 (342)
                      +-.+.++++.+.+-|++|+...++|..++++|+.+..+.+|
T Consensus        68 vyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR  108 (109)
T PRK02237         68 VYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR  108 (109)
T ss_pred             HHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence            34478889999999999999999999999999988876654

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=89.17  E-value=0.44  Score=39.07  Aligned_cols=62  Identities=13%  Similarity=0.129  Sum_probs=54.9

Q ss_pred             HHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCCC
Q 019344          247 YTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEK  308 (342)
Q Consensus       247 ~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  308 (342)
                      ...|..++++.+++.++.....+..+..+++++.+++++....+...++.+.|+++..+.+.
T Consensus        67 NY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN  128 (290)
T KOG4314|consen   67 NYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN  128 (290)
T ss_pred             CcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence            45566788999999888888888899999999999999999999999999999999987653

>PRK02237 hypothetical protein; Provisional

Probab=88.51  E-value=8.2  Score=28.49  Aligned_cols=51  Identities=22%  Similarity=0.541  Sum_probs=39.1

Q ss_pred             cchhHHHHhh-hhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecC
Q 019344          105 SSITSVTLLD-CCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (342)
Q Consensus       105 ~~~~~~~ii~-~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  155 (342)
                      .+.+.+.... ....+...+..+.+-|+|+++.+++|..++++|+.++.+..
T Consensus        56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p  107 (109)
T PRK02237         56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP  107 (109)
T ss_pred             hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence            3455554433 55555666888888999999999999999999999887654

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=88.36  E-value=6.6  Score=34.21  Aligned_cols=106  Identities=13%  Similarity=0.153  Sum_probs=72.7

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHH------hh----hhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHH
Q 019344           50 APVTQSAFAYFSLALVYGGVLLY------RR----QRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIA  119 (342)
Q Consensus        50 ~p~~~~~~r~~~~~~~~~~~~~~------~~----~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi  119 (342)
                      +..+++++.+.+..++++....-      .+    +.+.+.....++.++.+..+......=.+.-++..+..+...--.
T Consensus       219 ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKa  298 (367)
T KOG1582|consen  219 SSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKA  298 (367)
T ss_pred             CcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhH
Confidence            34555655555554444333321      11    122233455667777777775444444455677777777778888


Q ss_pred             HHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecC
Q 019344          120 WAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (342)
Q Consensus       120 ~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  155 (342)
                      .|.+++.+++.++++.....+..+.+.|+.+=..+.
T Consensus       299 vTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  299 VTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             HHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            899999999999999999999999999999988876

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=88.20  E-value=3.4  Score=30.33  Aligned_cols=41  Identities=10%  Similarity=0.118  Sum_probs=36.4

Q ss_pred             hHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCCC
Q 019344          268 TADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEK  308 (342)
Q Consensus       268 ~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  308 (342)
                      .-.+.+.++++.+-+++|+...++|..++++|+.+..+.+|
T Consensus        66 vfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR  106 (107)
T PF02694_consen   66 VFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR  106 (107)
T ss_pred             hHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence            34488999999999999999999999999999998887654

; GO: 0016020 membrane

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=87.99  E-value=7.2  Score=28.69  Aligned_cols=54  Identities=26%  Similarity=0.548  Sum_probs=41.4

Q ss_pred             hhccchhHHHHh-hhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecC
Q 019344          102 YQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (342)
Q Consensus       102 l~~~~~~~~~ii-~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  155 (342)
                      ++-.+.+.+... -....+...+..+.+-|+|+++.+++|..++++|+.++.+..
T Consensus        51 l~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P  105 (107)
T PF02694_consen   51 LQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP  105 (107)
T ss_pred             cCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence            344445555433 356666777888888999999999999999999999988754

; GO: 0016020 membrane

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=87.47  E-value=2.7  Score=36.67  Aligned_cols=65  Identities=18%  Similarity=0.244  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHHHHhhhhhHHHHhHhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccC
Q 019344          242 SSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTT  306 (342)
Q Consensus       242 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  306 (342)
                      +-..+-.+++.++..+.+....+..-...+|.-+++.-+++.+++..||.|+..+.+|++..-..
T Consensus        95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            44445566666888888888887777777999999999999999999999999999999887654

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=84.93  E-value=11  Score=32.89  Aligned_cols=137  Identities=14%  Similarity=0.054  Sum_probs=82.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHH---Hhh------h---------hhhH
Q 019344           18 RTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLL---YRR------Q---------RLRV   79 (342)
Q Consensus        18 ~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~p~~~~~~r~~~~~~~~~~~~~---~~~------~---------~~~~   79 (342)
                      ....|+.+-.++.++.+..+..-...++|-..++-+..++-..+....++...-   .+.      +         ..+.
T Consensus       161 ~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~  240 (330)
T KOG1583|consen  161 WWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPS  240 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccH
Confidence            455667666666666777777777777776666777777766666554433221   110      0         0122


Q ss_pred             HHHHHHHHHHHHHHH-HHHHHHHhhccchhHHHHhhhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecC
Q 019344           80 AWYWYLLLGFVDVQG-NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (342)
Q Consensus        80 ~~~~~~~~g~~~~~~-~~~~~~al~~~~~~~~~ii~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  155 (342)
                      .|.+++.--+...+. -..+..+ ...+.-.++++..+-=.+..+++.+.++..+++..|+|..+.+.|.++.....
T Consensus       241 ~~~yLl~n~L~Qy~CikgVy~L~-te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~  316 (330)
T KOG1583|consen  241 MWVYLLFNVLTQYFCIKGVYILT-TETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVW  316 (330)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhh-ceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            333332222222222 1111111 22333445666777788888999999999999999999999999999876543

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=83.96  E-value=3.3  Score=30.28  Aligned_cols=72  Identities=24%  Similarity=0.368  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHh-hhhhHHHHHHHHHHHhcccc-hHHHHHHHHHHHhhhhhhe
Q 019344           79 VAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRY-SLWQLLGAALCVLGLGLVL  152 (342)
Q Consensus        79 ~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~ii-~~~~pi~~~il~~l~l~e~~-~~~~~~g~~l~~~Gv~l~~  152 (342)
                      .+|. +.+-=+++.-+..++|.-+++.+.+.+..+ ++++-.++.+.+.. ++|+. ..+.+.|..+.++|+.+.+
T Consensus        51 l~w~-Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~-LGE~~~g~~a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   51 LNWE-YLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKA-LGEETQGGLALLGTSLIVFGIWLCI  124 (125)
T ss_pred             HhHH-HHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHH-hccccccceeehhhhHHhhhhhhee
Confidence            3444 333445566678889999999999998855 56778888888886 56655 5677889999999987653

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=83.19  E-value=22  Score=30.17  Aligned_cols=103  Identities=10%  Similarity=0.089  Sum_probs=75.4

Q ss_pred             hHHHHHHHHHHHHHHHHHH--HHHhhhh------hhH-HHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHhhhhhHHHH
Q 019344           51 PVTQSAFAYFSLALVYGGV--LLYRRQR------LRV-AWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWA  121 (342)
Q Consensus        51 p~~~~~~r~~~~~~~~~~~--~~~~~~~------~~~-~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~ii~~~~pi~~  121 (342)
                      .....++.-+++..+++.+  +..++.+      ++. ...++.+.|++..+..++.-+.++-++....+++..+.-...
T Consensus       185 d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~  264 (309)
T COG5070         185 DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPI  264 (309)
T ss_pred             hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChH
Confidence            4555566666665554443  3333321      122 335677888888888999999999999999999999998888


Q ss_pred             HHHHHHHhcccchHHHHHHHHHHHhhhhhhee
Q 019344          122 IVLTWLFLGTRYSLWQLLGAALCVLGLGLVLL  153 (342)
Q Consensus       122 ~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~  153 (342)
                      ++-+.++++|+.+...+.+++++++...+-..
T Consensus       265 alaGlvffdap~nf~si~sillGflsg~iYav  296 (309)
T COG5070         265 ALAGLVFFDAPVNFLSIFSILLGFLSGAIYAV  296 (309)
T ss_pred             HHhhhhhcCCchhHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998888776655443

>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=82.56  E-value=8  Score=27.86  Aligned_cols=35  Identities=17%  Similarity=0.397  Sum_probs=29.9

Q ss_pred             HHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhcc
Q 019344          271 MWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYST  305 (342)
Q Consensus       271 v~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  305 (342)
                      .+=+.++.+.++|++.+.++.|..++..|+.+..+
T Consensus        81 ~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fiFr  115 (116)
T COG3169          81 AIFVPFSVFYLKEPLRWNYLWAFLLILGAVYFIFR  115 (116)
T ss_pred             HHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHhcc
Confidence            44567889999999999999999999999877654

>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function

Probab=81.59  E-value=2.2  Score=31.23  Aligned_cols=32  Identities=16%  Similarity=0.377  Sum_probs=26.9

Q ss_pred             HHHHHHHHHhcccccHHHHHHHHHHHHHHHhh
Q 019344          272 WAVVFRICFYHQKVDWLYFLAFGIVVIGLIIY  303 (342)
Q Consensus       272 ~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~  303 (342)
                      .=..++.++++|++++..+.|..+++.+++..
T Consensus        75 vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi  106 (108)
T PF04342_consen   75 VFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI  106 (108)
T ss_pred             eeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence            34567788999999999999999999887654

>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function

Probab=81.16  E-value=19  Score=26.44  Aligned_cols=47  Identities=11%  Similarity=0.133  Sum_probs=33.3

Q ss_pred             cchhHHHHhh-hhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhh
Q 019344          105 SSITSVTLLD-CCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLV  151 (342)
Q Consensus       105 ~~~~~~~ii~-~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~  151 (342)
                      -+.+.--+++ ..+-..-+.++.+++||++++....|..+.+.++..+
T Consensus        59 ~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi  106 (108)
T PF04342_consen   59 FSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI  106 (108)
T ss_pred             cCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence            3444444554 3333444678889999999999999999988776654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	342
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.97
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.67
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.57
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.55

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.97  E-value=1e-09  Score=84.52  Aligned_cols=66  Identities=11%  Similarity=0.096  Sum_probs=48.9

Q ss_pred             HHHHHHHHHHHHHhhhhhHHHHhH-hhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCC
Q 019344          242 SSFMFYTLAPFVLKLSGATMFNLS-LLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTE  307 (342)
Q Consensus       242 ~~~~~~~~~~~~~~~~~a~~~~~~-~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  307 (342)
                      +..++|.++.+++++.+...+... ..+.|+++.++++++|+|++++.+++|+++|++|+++....+
T Consensus        39 ~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            677778999999999999977666 789999999999999999999999999999999999988654

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.67  E-value=4.6e-07  Score=67.23  Aligned_cols=70  Identities=17%  Similarity=0.297  Sum_probs=61.8

Q ss_pred             HHHHHH-HHHHHHHHHHhhccchhHHHHh-hhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecC
Q 019344           86 LLGFVD-VQGNFLVNKAYQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (342)
Q Consensus        86 ~~g~~~-~~~~~~~~~al~~~~~~~~~ii-~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  155 (342)
                      +.++.. ...+.++..++++.|.+.+..+ .++.|+++.+++.+++||++++.+++|+.+.+.|++++...+
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            344444 4448889999999999999988 799999999999999999999999999999999999987754

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.57  E-value=2.3e-06  Score=63.38  Aligned_cols=66  Identities=11%  Similarity=0.096  Sum_probs=58.5

Q ss_pred             HHHHHHHHHHHHHhhhhhHHHHhH-hhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHhhccCC
Q 019344          242 SSFMFYTLAPFVLKLSGATMFNLS-LLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTE  307 (342)
Q Consensus       242 ~~~~~~~~~~~~~~~~~a~~~~~~-~~~~pv~~~~~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  307 (342)
                      +...++.++.+++++.+...+-.. ..+.|+++.+++++++||++++.+++|..+|+.|+++....+
T Consensus        39 ~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            566677888889999998877665 789999999999999999999999999999999999987643

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.55  E-value=2.3e-07  Score=71.33  Aligned_cols=70  Identities=17%  Similarity=0.292  Sum_probs=50.6

Q ss_pred             HHHHHHH-HHHHHHHHHhhccchhHHHHh-hhhhHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhhheecC
Q 019344           86 LLGFVDV-QGNFLVNKAYQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (342)
Q Consensus        86 ~~g~~~~-~~~~~~~~al~~~~~~~~~ii-~~~~pi~~~il~~l~l~e~~~~~~~~g~~l~~~Gv~l~~~~~  155 (342)
                      +.+++.. ..++++..++++.|++.+..+ .++.|+++++++.++++|++++.+++|+.+.++|++++...+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3444444 448999999999999999988 899999999999999999999999999999999999987654

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00