Citrus Sinensis ID: 019402
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 341 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LZG0 | 345 | Adenosine kinase 2 OS=Ara | yes | no | 0.994 | 0.982 | 0.840 | 1e-174 | |
| Q9SF85 | 344 | Adenosine kinase 1 OS=Ara | no | no | 0.994 | 0.985 | 0.823 | 1e-170 | |
| O49923 | 343 | Adenosine kinase OS=Physc | N/A | no | 0.997 | 0.991 | 0.667 | 1e-136 | |
| P55264 | 361 | Adenosine kinase OS=Mus m | yes | no | 0.991 | 0.936 | 0.579 | 1e-116 | |
| Q64640 | 361 | Adenosine kinase OS=Rattu | yes | no | 0.991 | 0.936 | 0.582 | 1e-116 | |
| P55263 | 362 | Adenosine kinase OS=Homo | yes | no | 0.991 | 0.933 | 0.567 | 1e-115 | |
| P55262 | 361 | Adenosine kinase OS=Crice | yes | no | 0.991 | 0.936 | 0.573 | 1e-112 | |
| P78825 | 340 | Adenosine kinase OS=Schiz | yes | no | 0.967 | 0.970 | 0.437 | 4e-76 | |
| Q54MB5 | 340 | Adenosine kinase OS=Dicty | yes | no | 0.973 | 0.976 | 0.433 | 3e-75 | |
| P47143 | 340 | Adenosine kinase OS=Sacch | yes | no | 0.944 | 0.947 | 0.391 | 9e-60 |
| >sp|Q9LZG0|ADK2_ARATH Adenosine kinase 2 OS=Arabidopsis thaliana GN=ADK2 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 610 bits (1572), Expect = e-174, Method: Compositional matrix adjust.
Identities = 285/339 (84%), Positives = 320/339 (94%)
Query: 3 YEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGG 62
Y+GILLGMGNPLLDISAVVD+EFL KYDIKLNNAILAEDKHLPMYDE++SK NVEYIAGG
Sbjct: 7 YDGILLGMGNPLLDISAVVDDEFLTKYDIKLNNAILAEDKHLPMYDEMSSKFNVEYIAGG 66
Query: 63 ATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAV 122
ATQNSIKVAQWMLQIPGATSY+G IGKDK+GE MKK++TAAGVNV YYEDESAPTGTC V
Sbjct: 67 ATQNSIKVAQWMLQIPGATSYMGSIGKDKYGEAMKKDATAAGVNVHYYEDESAPTGTCGV 126
Query: 123 CVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHA 182
CVVGGERSL+ANLSAANCYK +HLK+PE W++VEKAK+YYIAGFFLTVSPESIQ+V+EHA
Sbjct: 127 CVVGGERSLIANLSAANCYKVDHLKKPENWALVEKAKFYYIAGFFLTVSPESIQLVSEHA 186
Query: 183 AAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIAL 242
AA NKVF MNLSAPFICEFF++ QEK LPYMD+VFGNETEARTF++VHGWET++VE+IA+
Sbjct: 187 AANNKVFTMNLSAPFICEFFKDVQEKFLPYMDFVFGNETEARTFSRVHGWETEDVEQIAI 246
Query: 243 KISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGF 302
KISQ PKA+GT+KR TVITQGADPVVVAEDGKVK +PVI LPKEKLVDTNGAGDAFVGGF
Sbjct: 247 KISQLPKATGTYKRTTVITQGADPVVVAEDGKVKKYPVIPLPKEKLVDTNGAGDAFVGGF 306
Query: 303 LSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
+SQLV+EK +E+CV+ GCYA+NVVIQRSGCTYP KP+FN
Sbjct: 307 MSQLVKEKSIEECVKAGCYASNVVIQRSGCTYPEKPDFN 345
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Essential to sustain methyl recycling. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 2EC: 0 |
| >sp|Q9SF85|ADK1_ARATH Adenosine kinase 1 OS=Arabidopsis thaliana GN=ADK1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 598 bits (1543), Expect = e-170, Method: Compositional matrix adjust.
Identities = 279/339 (82%), Positives = 314/339 (92%)
Query: 3 YEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGG 62
++GILLGMGNPLLD+SAVVD++FL KYDIKLNNAILAEDKHLPMYDE++ K NVEYIAGG
Sbjct: 6 FDGILLGMGNPLLDVSAVVDQQFLDKYDIKLNNAILAEDKHLPMYDEMSQKFNVEYIAGG 65
Query: 63 ATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAV 122
ATQNSIKVAQWMLQ+PGATSY+G IGKDK+GE MKK++TAAGV V YYEDE+ PTGTC V
Sbjct: 66 ATQNSIKVAQWMLQVPGATSYMGSIGKDKYGEAMKKDATAAGVYVHYYEDEATPTGTCGV 125
Query: 123 CVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHA 182
CV+GGERSL+ANLSAANCYK EHLK+PE W++VEKAK+YYIAGFFLTVSPESIQ+V EHA
Sbjct: 126 CVLGGERSLIANLSAANCYKVEHLKKPENWALVEKAKFYYIAGFFLTVSPESIQLVREHA 185
Query: 183 AAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIAL 242
AA NKVF MNLSAPFICEFF++ QEK LPYMDY+FGNETEARTF++VHGWETD+VE+IA+
Sbjct: 186 AANNKVFTMNLSAPFICEFFKDVQEKCLPYMDYIFGNETEARTFSRVHGWETDDVEQIAI 245
Query: 243 KISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGF 302
K+SQ PKASGT+KR TVITQGADPVVVAEDGKVK +PVI LPKEKLVDTNGAGDAFVGGF
Sbjct: 246 KMSQLPKASGTYKRTTVITQGADPVVVAEDGKVKKYPVIPLPKEKLVDTNGAGDAFVGGF 305
Query: 303 LSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
LSQLV K +E+CVR GCYA+NVVIQRSGCTYP KP+FN
Sbjct: 306 LSQLVHGKGIEECVRAGCYASNVVIQRSGCTYPEKPDFN 344
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Essential to sustain methyl recycling. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|O49923|ADK_PHYPA Adenosine kinase OS=Physcomitrella patens subsp. patens GN=ADK PE=2 SV=1 | Back alignment and function description |
|---|
Score = 486 bits (1250), Expect = e-136, Method: Compositional matrix adjust.
Identities = 227/340 (66%), Positives = 275/340 (80%)
Query: 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIA 60
MA EG+LLGMGNPLLDIS VVD+ FL+KY + LNNAILAEDKHLPMY ELA+ +VEYIA
Sbjct: 1 MASEGVLLGMGNPLLDISCVVDDAFLEKYGLTLNNAILAEDKHLPMYKELAANPDVEYIA 60
Query: 61 GGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTC 120
GGATQN+I++AQWML ATSY GC+GKD++G+ M K ++ GVN++Y DE PTGTC
Sbjct: 61 GGATQNTIRIAQWMLGESNATSYFGCVGKDEYGDRMFKLASEGGVNIRYDVDEDLPTGTC 120
Query: 121 AVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAE 180
V VV GERSLVANLSAAN YK +HLK+PE W+ VEKAKY Y AGFFLTVSPES+ VA+
Sbjct: 121 GVLVVKGERSLVANLSAANKYKIDHLKKPENWAFVEKAKYIYSAGFFLTVSPESMMTVAK 180
Query: 181 HAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEI 240
HAA K +M+NL+APFIC+FF++P + PY+D++FGNE+EAR FA+V GWET++ + I
Sbjct: 181 HAAETGKYYMINLAAPFICQFFKDPLMELFPYVDFIFGNESEARAFAQVQGWETEDTKVI 240
Query: 241 ALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVG 300
A+K++ PKA GTHKR+ VITQG DP +VAEDGKV FPV +PKEKLVDTN AGD+FVG
Sbjct: 241 AVKLAALPKAGGTHKRVAVITQGTDPTIVAEDGKVTEFPVTPIPKEKLVDTNAAGDSFVG 300
Query: 301 GFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEF 340
GFLSQLV K + CVR G YAA+V+IQRSGCT+P KP F
Sbjct: 301 GFLSQLVLGKDIAQCVRAGNYAASVIIQRSGCTFPSKPSF 340
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Can also act on the cytokinin isopentenyladenosine to produce isopentenyladenosine monophosphate. Physcomitrella patens subsp. patens (taxid: 145481) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|P55264|ADK_MOUSE Adenosine kinase OS=Mus musculus GN=Adk PE=1 SV=2 | Back alignment and function description |
|---|
Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust.
Identities = 197/340 (57%), Positives = 253/340 (74%), Gaps = 2/340 (0%)
Query: 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGA 63
E +L GMGNPLLDISAVVD++FL KY +K N+ ILAEDKH ++DEL K VEY AGG+
Sbjct: 22 ENVLFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGS 81
Query: 64 TQNSIKVAQWMLQIP-GATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAV 122
TQNS+KVAQW++Q P A ++ GCIG DKFGE +K+ + A V+ YYE PTGTCA
Sbjct: 82 TQNSMKVAQWLIQEPHKAATFFGCIGIDKFGEILKRKAADAHVDAHYYEQNEQPTGTCAA 141
Query: 123 CVVGGERSLVANLSAANCYKSE-HLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEH 181
C+ GG RSLVANL+AANCYK E HL W +VEKA+ YYIAGFFLTVSPES+ VA +
Sbjct: 142 CITGGNRSLVANLAAANCYKKEKHLDLERNWVLVEKARVYYIAGFFLTVSPESVLKVARY 201
Query: 182 AAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIA 241
AA N+VF +NLSAPFI +FF+E +PY+D +FGNETEA TFA+ G+ET +++EIA
Sbjct: 202 AAENNRVFTLNLSAPFISQFFKEALMDVMPYVDILFGNETEAATFAREQGFETKDIKEIA 261
Query: 242 LKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGG 301
K PK + +R + TQG D +VA + V FPV+ +E+++DTNGAGDAFVGG
Sbjct: 262 KKAQALPKVNSKRQRTVIFTQGRDDTIVAAENDVTAFPVLDQNQEEIIDTNGAGDAFVGG 321
Query: 302 FLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
FLSQLV +KP+ +C+R G YAA+V+I+R+GCT+P KP+F+
Sbjct: 322 FLSQLVSDKPLTECIRAGHYAASVIIRRTGCTFPEKPDFH 361
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Serves as a potential regulator of concentrations of extracellular adenosine and intracellular adenine nucleotides. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|Q64640|ADK_RAT Adenosine kinase OS=Rattus norvegicus GN=Adk PE=1 SV=3 | Back alignment and function description |
|---|
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 198/340 (58%), Positives = 250/340 (73%), Gaps = 2/340 (0%)
Query: 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGA 63
E +L GMGNPLLDISAVVD++FL KY +K N+ ILAEDKH ++DEL K VEY AGG+
Sbjct: 22 ENVLFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGS 81
Query: 64 TQNSIKVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAV 122
TQNS+KVAQWM+Q P A ++ GCIG DKFGE +K + A V+ YYE PTGTCA
Sbjct: 82 TQNSMKVAQWMIQEPHRAATFFGCIGIDKFGEILKSKAADAHVDAHYYEQNEQPTGTCAA 141
Query: 123 CVVGGERSLVANLSAANCYKSE-HLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEH 181
C+ GG RSLVANL+AANCYK E HL W +VEKA+ YYIAGFFLTVSPES+ VA +
Sbjct: 142 CITGGNRSLVANLAAANCYKKEKHLDLENNWMLVEKARVYYIAGFFLTVSPESVLKVARY 201
Query: 182 AAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIA 241
AA N+ F +NLSAPFI +FF+E + +PY+D +FGNETEA TFA+ G+ET +++EIA
Sbjct: 202 AAENNRTFTLNLSAPFISQFFKEALMEVMPYVDILFGNETEAATFAREQGFETKDIKEIA 261
Query: 242 LKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGG 301
K PK + +R + TQG D +VA V FPV+ +E++VDTNGAGDAFVGG
Sbjct: 262 RKTQALPKVNSKRQRTVIFTQGRDDTIVATGNDVTAFPVLDQNQEEIVDTNGAGDAFVGG 321
Query: 302 FLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
FLSQLV KP+ +C+R G YAA+V+I+R+GCT+P KP+F+
Sbjct: 322 FLSQLVSNKPLTECIRAGHYAASVIIRRTGCTFPEKPDFH 361
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Serves as a potential regulator of concentrations of extracellular adenosine and intracellular adenine nucleotides. Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|P55263|ADK_HUMAN Adenosine kinase OS=Homo sapiens GN=ADK PE=1 SV=2 | Back alignment and function description |
|---|
Score = 414 bits (1064), Expect = e-115, Method: Compositional matrix adjust.
Identities = 193/340 (56%), Positives = 254/340 (74%), Gaps = 2/340 (0%)
Query: 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGA 63
E IL GMGNPLLDISAVVD++FL KY +K N+ ILAEDKH ++DEL K VEY AGG+
Sbjct: 23 ENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGS 82
Query: 64 TQNSIKVAQWMLQIP-GATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAV 122
TQNSIKVAQWM+Q P A ++ GCIG DKFGE +K+ + A V+ YYE PTGTCA
Sbjct: 83 TQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAA 142
Query: 123 CVVGGERSLVANLSAANCYKSE-HLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEH 181
C+ G RSL+ANL+AANCYK E HL + W +VEKA+ YIAGFFLTVSPES+ VA H
Sbjct: 143 CITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLKVAHH 202
Query: 182 AAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIA 241
A+ N++F +NLSAPFI +F++E K +PY+D +FGNETEA TFA+ G+ET +++EIA
Sbjct: 203 ASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEIA 262
Query: 242 LKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGG 301
K PK + +RI + TQG D ++A + +V F V+ +++++DTNGAGDAFVGG
Sbjct: 263 KKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGG 322
Query: 302 FLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
FLSQLV +KP+ +C+R G YAA+++I+R+GCT+P KP+F+
Sbjct: 323 FLSQLVSDKPLTECIRAGHYAASIIIRRTGCTFPEKPDFH 362
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Serves as a potential regulator of concentrations of extracellular adenosine and intracellular adenine nucleotides. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|P55262|ADK_CRIGR Adenosine kinase OS=Cricetulus griseus GN=ADK PE=1 SV=2 | Back alignment and function description |
|---|
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/340 (57%), Positives = 249/340 (73%), Gaps = 2/340 (0%)
Query: 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGA 63
E +L GMGNPLLDISAVVD++FL KY +K N+ ILAE+KH ++DEL K VEY AGG+
Sbjct: 22 ENVLFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEEKHKELFDELVRKFKVEYHAGGS 81
Query: 64 TQNSIKVAQWMLQIP-GATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAV 122
TQNSIKVAQWM+Q P A ++ GCIG DKFGE +K + A V+ YYE PTGTCA
Sbjct: 82 TQNSIKVAQWMIQKPHKAATFFGCIGIDKFGEILKSKAAEAHVDAHYYEQNEQPTGTCAA 141
Query: 123 CVVGGERSLVANLSAANCYKSE-HLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEH 181
C+ G RSLVANL+AANCYK E HL W +VEKA+ YYIAGFFLTVSPES+ VA +
Sbjct: 142 CITGDNRSLVANLAAANCYKKEKHLDLENNWVLVEKARVYYIAGFFLTVSPESVLKVARY 201
Query: 182 AAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIA 241
AA N++F +NLSAPFI +FF+E + +PY+D +FGNETEA TFA+ G+ET +++EIA
Sbjct: 202 AAENNRIFTLNLSAPFISQFFKESLMEVMPYVDILFGNETEAATFAREQGFETKDIKEIA 261
Query: 242 LKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGG 301
K K + R V TQG D VVA + +V F V+ +++++DTNGAGDAFVGG
Sbjct: 262 KKAQALAKVNSKRPRTVVFTQGRDDTVVATENEVMAFAVLDQNQKEIIDTNGAGDAFVGG 321
Query: 302 FLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
FLSQLV KP+ +C+R G YAA+V+I+R+GCT+P KP+F+
Sbjct: 322 FLSQLVYNKPLTECIRAGHYAASVIIRRTGCTFPEKPDFH 361
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Serves as a potential regulator of concentrations of extracellular adenosine and intracellular adenine nucleotides. Cricetulus griseus (taxid: 10029) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|P78825|ADK_SCHPO Adenosine kinase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ado1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 285 bits (728), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 148/338 (43%), Positives = 214/338 (63%), Gaps = 8/338 (2%)
Query: 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQ 65
IL G+ NPLLD + L+KY +K N+A+LA + + +Y E V Y AGGA Q
Sbjct: 5 ILFGLENPLLDYYVGGETATLEKYGLKSNDAVLASESQMGIYKEPC----VSYSAGGAAQ 60
Query: 66 NSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV 125
NS + AQ++L P +T + GC+G+DKF + + +++ AG+ ++ D + PTG CAV +
Sbjct: 61 NSCRAAQYVLP-PNSTVFAGCVGQDKFADMLLESNEKAGLRSEFSVDPTTPTGVCAVVLS 119
Query: 126 GGE--RSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAA 183
RSL NL AAN YK + L++P +W VE+AK Y+ GF LTVSPES+ +A+HA
Sbjct: 120 NNNKNRSLCTNLGAANNYKLKDLQQPNVWKFVEEAKVIYVGGFHLTVSPESMLCLAQHAN 179
Query: 184 AKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALK 243
NK ++MNLSAPF+ +FF+E + +PY DYV GNE E ++ + HG ++ +V+EIAL
Sbjct: 180 ENNKPYIMNLSAPFLSQFFKEQMDSVIPYCDYVIGNEAEILSYGENHGIKSTDVQEIALA 239
Query: 244 ISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFL 303
+S K + R+ VITQGAD +VA+DGKV + +P E++VDTNGAGDAF GGF+
Sbjct: 240 LSSVEKVNKKRTRVVVITQGADATIVAKDGKVTTYKPNRVPSEEIVDTNGAGDAFAGGFI 299
Query: 304 SQLVQEKPVEDCVRTGCYAANVVIQRSGCTYP-PKPEF 340
+ L Q + ++ V G + I+ SG T P PK +F
Sbjct: 300 AALSQGQGIDYAVTLGHWLGQECIKVSGTTLPLPKKQF 337
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|Q54MB5|ADK_DICDI Adenosine kinase OS=Dictyostelium discoideum GN=adk PE=3 SV=2 | Back alignment and function description |
|---|
Score = 282 bits (722), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 146/337 (43%), Positives = 208/337 (61%), Gaps = 5/337 (1%)
Query: 7 LLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQN 66
+L GNPLLD+S V+ L KY++KL NAILAEDKHLP+Y E+ S + VEYI GGA QN
Sbjct: 6 ILCAGNPLLDLSTHVEMAILDKYELKLGNAILAEDKHLPLYGEIKSGK-VEYIPGGAAQN 64
Query: 67 SIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVG 126
+ +V QWML+ Y GC+G D+ +K + + GV KY D SAPTG CAV +
Sbjct: 65 TSRVCQWMLKDKQTVCYTGCVGTDENATILKTATESNGVVTKYQVDSSAPTGACAVLINH 124
Query: 127 GERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKN 186
ERS+V NL AAN +K H + E+ +IV A+++Y+ G+FLTVSP+S + +HAA +
Sbjct: 125 KERSMVTNLGAANNFKIAHFQTEEMKAIVNSAQFFYLVGYFLTVSPDSAVHLGKHAAEND 184
Query: 187 KVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQ 246
K F+ L+APF+ +FF + + LPY+D VF NE+EA T + W D + IA K++
Sbjct: 185 KPFLYGLAAPFLIDFFFDKVSELLPYVDIVFANESEAATLGRKMNWGED-LTVIAEKLAA 243
Query: 247 WPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQL 306
W K + R V TQG D +V ++G + + I + E ++D N AGD+F GGFL+
Sbjct: 244 WEKVNTKRTRTVVFTQGPDATLVFQNGVLTKYNPIKVATEDILDLNAAGDSFCGGFLAAY 303
Query: 307 VQEKPVEDCVRTGCYAANVVIQRSGCTYP---PKPEF 340
+ + CV G YA+ +I+++G T P PK +F
Sbjct: 304 SNGQEIAKCVEAGHYASWEIIRQNGATVPASEPKIQF 340
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|P47143|ADK_YEAST Adenosine kinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ADO1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 230 bits (587), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 131/335 (39%), Positives = 185/335 (55%), Gaps = 13/335 (3%)
Query: 7 LLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAE----DKHLPMYDELASKENVEYIAGG 62
L+ +GNPLLD A V E+L KY +K N+AIL + D + ++DEL + +AGG
Sbjct: 5 LVVLGNPLLDFQADVTAEYLAKYSLKENDAILVDAKSGDAKMAIFDELLQMPETKLVAGG 64
Query: 63 ATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAV 122
A QN+ + A ++L G Y G +GKDKF E + + AGV Y TG CA
Sbjct: 65 AAQNTARGAAYVLG-AGQVVYFGSVGKDKFSERLLNENEKAGVKSMYQVQNDIGTGKCAA 123
Query: 123 CVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHA 182
+ G RSLV +L AAN + +HL + W +VE AK +YI GF LTVSP++I + +HA
Sbjct: 124 LITGHNRSLVTDLGAANFFTPDHLDKH--WDLVEAAKLFYIGGFHLTVSPDAIVKLGQHA 181
Query: 183 AAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDN--VEEI 240
+K F++N SAPFI F++ + LPY + NE+EA F + N +E I
Sbjct: 182 KENSKPFVLNFSAPFIPHVFKDALARVLPYATVIIANESEAEAFCDAFQLDCANTDLEAI 241
Query: 241 ALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVG 300
A +I K S K + + T G +P VV +PV L K+VDTNGAGDAF G
Sbjct: 242 AQRIV---KDSPVEKTV-IFTHGVEPTVVVSSKGTSTYPVKPLDSSKIVDTNGAGDAFAG 297
Query: 301 GFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYP 335
GF++ L + + +E + G + A + IQ G +YP
Sbjct: 298 GFMAGLTKGEDLETSIDMGQWLAALSIQEVGPSYP 332
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. ADO1 does not play a major role in adenine utilization in yeast. Its physiological role could primarily be to recycle adenosine produced by the methyl cycle. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 341 | ||||||
| 224109788 | 341 | predicted protein [Populus trichocarpa] | 0.997 | 0.997 | 0.905 | 0.0 | |
| 225449018 | 341 | PREDICTED: adenosine kinase 2 [Vitis vin | 1.0 | 1.0 | 0.900 | 0.0 | |
| 118484212 | 341 | unknown [Populus trichocarpa] | 0.997 | 0.997 | 0.902 | 0.0 | |
| 225449016 | 341 | PREDICTED: adenosine kinase 2 [Vitis vin | 1.0 | 1.0 | 0.891 | 0.0 | |
| 255581753 | 342 | adenosine kinase, putative [Ricinus comm | 0.997 | 0.994 | 0.894 | 0.0 | |
| 224100781 | 341 | predicted protein [Populus trichocarpa] | 1.0 | 1.0 | 0.891 | 0.0 | |
| 449464370 | 341 | PREDICTED: adenosine kinase 2-like [Cucu | 1.0 | 1.0 | 0.888 | 0.0 | |
| 211906446 | 341 | adenosine kinase [Gossypium hirsutum] | 0.997 | 0.997 | 0.894 | 0.0 | |
| 296086003 | 332 | unnamed protein product [Vitis vinifera] | 0.973 | 1.0 | 0.897 | 1e-178 | |
| 296086001 | 332 | unnamed protein product [Vitis vinifera] | 0.973 | 1.0 | 0.888 | 1e-178 |
| >gi|224109788|ref|XP_002315310.1| predicted protein [Populus trichocarpa] gi|118483900|gb|ABK93840.1| unknown [Populus trichocarpa] gi|222864350|gb|EEF01481.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/340 (90%), Positives = 326/340 (95%)
Query: 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIA 60
MA EGILLGMGNPLLDISAVVD++FL+KYDIKLNNAILAEDKHLPMYDE+ASK+NVEYIA
Sbjct: 1 MACEGILLGMGNPLLDISAVVDDDFLQKYDIKLNNAILAEDKHLPMYDEMASKDNVEYIA 60
Query: 61 GGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTC 120
GGATQNSI+VAQWMLQIPG TSY+G IGKDKFGEEMKKNST AGVNV YYEDE+APTGTC
Sbjct: 61 GGATQNSIRVAQWMLQIPGVTSYMGSIGKDKFGEEMKKNSTEAGVNVHYYEDEAAPTGTC 120
Query: 121 AVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAE 180
AVCVVGGERSL+ANLSAANCYKSEHLKRPE W +VEKAKY+YIAGFFLTVSPESI +VAE
Sbjct: 121 AVCVVGGERSLIANLSAANCYKSEHLKRPENWKLVEKAKYFYIAGFFLTVSPESIMLVAE 180
Query: 181 HAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEI 240
HAAA NKVFMMNLSAPFICEFF++ QEKALPYMDYVFGNETEARTFAKVHGWET+NVEEI
Sbjct: 181 HAAANNKVFMMNLSAPFICEFFKDVQEKALPYMDYVFGNETEARTFAKVHGWETENVEEI 240
Query: 241 ALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVG 300
ALKISQWPKASG HKRI VITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVG
Sbjct: 241 ALKISQWPKASGAHKRIAVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVG 300
Query: 301 GFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEF 340
GFLSQLVQEKP+EDCVR GCYAANV+IQRSGCTYP KP+F
Sbjct: 301 GFLSQLVQEKPIEDCVRAGCYAANVIIQRSGCTYPEKPDF 340
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225449018|ref|XP_002272669.1| PREDICTED: adenosine kinase 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/341 (90%), Positives = 328/341 (96%)
Query: 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIA 60
MAYEGILLGMGNPLLDIS+VVDEEFL+KYDIKLNNAILAEDKHLPMYDE+ASK NVEYIA
Sbjct: 1 MAYEGILLGMGNPLLDISSVVDEEFLQKYDIKLNNAILAEDKHLPMYDEMASKYNVEYIA 60
Query: 61 GGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTC 120
GGATQNSI+V QWMLQIPGATSY+GCIGKDKFGEEMKKNS AGVNV Y EDE+APTGTC
Sbjct: 61 GGATQNSIRVCQWMLQIPGATSYMGCIGKDKFGEEMKKNSKLAGVNVHYREDETAPTGTC 120
Query: 121 AVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAE 180
AVCVVGGERSL+ANLSAANCYKSEHLKRPE W++VEKAKY+YIAGFFLTVSPESI +VAE
Sbjct: 121 AVCVVGGERSLIANLSAANCYKSEHLKRPENWALVEKAKYFYIAGFFLTVSPESILLVAE 180
Query: 181 HAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEI 240
HAAA NKVFMMNLSAPFICEFF++ QEKALPYMDYVFGNETEARTFAKVHGWETDNVEEI
Sbjct: 181 HAAANNKVFMMNLSAPFICEFFKDQQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEI 240
Query: 241 ALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVG 300
A+KISQWPKASGTHKRITVITQGADPVVVAEDGKVK FPVILLPKEKLVDTNGAGDAFVG
Sbjct: 241 AIKISQWPKASGTHKRITVITQGADPVVVAEDGKVKSFPVILLPKEKLVDTNGAGDAFVG 300
Query: 301 GFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
GFLSQLVQEKP+E+CVR GCYA++V+IQRSGCTYP KP+F+
Sbjct: 301 GFLSQLVQEKPIEECVRAGCYASHVIIQRSGCTYPEKPDFS 341
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118484212|gb|ABK93986.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/340 (90%), Positives = 327/340 (96%)
Query: 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIA 60
MA EGILLGMGNPLLDISAVVD++FL+KYDIKLNNAILAEDKHLPMYDE+ASK+NVEYIA
Sbjct: 1 MACEGILLGMGNPLLDISAVVDDDFLQKYDIKLNNAILAEDKHLPMYDEMASKDNVEYIA 60
Query: 61 GGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTC 120
GGATQNSI+VAQWMLQIPGATSY+G IGKDKFGEEMKKNST AGVNV YYEDE+APTGTC
Sbjct: 61 GGATQNSIRVAQWMLQIPGATSYMGSIGKDKFGEEMKKNSTEAGVNVHYYEDEAAPTGTC 120
Query: 121 AVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAE 180
AVCVVGGERSL+ANLSAANCYKSEHLKRPE W +VEKAKY+YIAGFFLTVSPESI +VAE
Sbjct: 121 AVCVVGGERSLIANLSAANCYKSEHLKRPENWKLVEKAKYFYIAGFFLTVSPESIMLVAE 180
Query: 181 HAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEI 240
HAAA NKVFMMNLSAPFICEFF++ QEKALPYMDYVFGNETEARTFAKVHGWET+NVEEI
Sbjct: 181 HAAANNKVFMMNLSAPFICEFFKDVQEKALPYMDYVFGNETEARTFAKVHGWETENVEEI 240
Query: 241 ALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVG 300
ALKISQWPKASG HKRI VITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVG
Sbjct: 241 ALKISQWPKASGAHKRIAVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVG 300
Query: 301 GFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEF 340
GFLSQ+VQEKP+EDCV+ GCYAANV+IQRSGCTYP KP+F
Sbjct: 301 GFLSQMVQEKPIEDCVKAGCYAANVIIQRSGCTYPEKPDF 340
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225449016|ref|XP_002272337.1| PREDICTED: adenosine kinase 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/341 (89%), Positives = 328/341 (96%)
Query: 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIA 60
MAYEGILLGMGNPLLDIS+VVDEEFL++YDIKLNNAILAEDKHLPMYDE+ASK NVEYIA
Sbjct: 1 MAYEGILLGMGNPLLDISSVVDEEFLQRYDIKLNNAILAEDKHLPMYDEMASKYNVEYIA 60
Query: 61 GGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTC 120
GGATQNSI+V QWMLQIPGATSY+GCIGKDKFGEEMKKNS AGVNV Y EDE+APTGTC
Sbjct: 61 GGATQNSIRVCQWMLQIPGATSYMGCIGKDKFGEEMKKNSKLAGVNVHYREDETAPTGTC 120
Query: 121 AVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAE 180
AVCVVGGERSL+ANLSAANCYKSEHLKRPE W++VEKAKY+YIAGFFLTVSPESI +VAE
Sbjct: 121 AVCVVGGERSLIANLSAANCYKSEHLKRPENWALVEKAKYFYIAGFFLTVSPESILLVAE 180
Query: 181 HAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEI 240
HAAA NKVFMMNLSAPFICEFF++ QEKALPYMDYVFGNETEARTF++VHGWETDNVEEI
Sbjct: 181 HAAANNKVFMMNLSAPFICEFFKDQQEKALPYMDYVFGNETEARTFSRVHGWETDNVEEI 240
Query: 241 ALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVG 300
A+KISQWPKASGTHKRITVITQGADPVVVAEDGKVK FPVILLPKEKLVDTNGAGDAFVG
Sbjct: 241 AIKISQWPKASGTHKRITVITQGADPVVVAEDGKVKSFPVILLPKEKLVDTNGAGDAFVG 300
Query: 301 GFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
GFLSQLVQEKP+E+CVR GCYA++V+IQRSGCTYP KP+F+
Sbjct: 301 GFLSQLVQEKPIEECVRAGCYASHVIIQRSGCTYPEKPDFS 341
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255581753|ref|XP_002531678.1| adenosine kinase, putative [Ricinus communis] gi|223528683|gb|EEF30697.1| adenosine kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/340 (89%), Positives = 324/340 (95%)
Query: 2 AYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAG 61
+YEGILLGMGNPLLDISAVVDE+FL KY+IKLNNAILAEDKHLPMY+E+A+ NVEYIAG
Sbjct: 3 SYEGILLGMGNPLLDISAVVDEDFLNKYEIKLNNAILAEDKHLPMYEEMANNSNVEYIAG 62
Query: 62 GATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCA 121
GATQNSIKVAQWMLQIPGATSY+GCIGKDKFGEEM KNS AGVNV YYEDE+APTGTC
Sbjct: 63 GATQNSIKVAQWMLQIPGATSYMGCIGKDKFGEEMTKNSKKAGVNVHYYEDETAPTGTCG 122
Query: 122 VCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEH 181
VCVVGGERSLVANLSAANCYKSEHLKRPE W++VEKAKY+YIAGFFLTVSPESIQ+VAEH
Sbjct: 123 VCVVGGERSLVANLSAANCYKSEHLKRPENWALVEKAKYFYIAGFFLTVSPESIQLVAEH 182
Query: 182 AAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIA 241
AAA NK+F MNLSAPFICEFF++ QEK LPYMDYVFGNETEARTFAKVHGWETDNVEEIA
Sbjct: 183 AAANNKIFTMNLSAPFICEFFKDAQEKVLPYMDYVFGNETEARTFAKVHGWETDNVEEIA 242
Query: 242 LKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGG 301
KISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGG
Sbjct: 243 KKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGG 302
Query: 302 FLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
FLSQLVQEKP+E+CVR GCYAANV+IQRSGCTYP KP+F+
Sbjct: 303 FLSQLVQEKPIEECVRAGCYAANVIIQRSGCTYPEKPDFS 342
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224100781|ref|XP_002312012.1| predicted protein [Populus trichocarpa] gi|118482012|gb|ABK92937.1| unknown [Populus trichocarpa] gi|222851832|gb|EEE89379.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/341 (89%), Positives = 326/341 (95%)
Query: 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIA 60
MA EGILLGMGNPLLDISAVVD++FL+KYDIKLNNAILAEDKH+PMYDE+ASK VE+IA
Sbjct: 1 MASEGILLGMGNPLLDISAVVDDDFLQKYDIKLNNAILAEDKHIPMYDEMASKYTVEFIA 60
Query: 61 GGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTC 120
GGATQNSIKVAQWMLQIPGATSY+GCIGKDKFGEEMKKNS AGVNV YYEDE+APTGTC
Sbjct: 61 GGATQNSIKVAQWMLQIPGATSYMGCIGKDKFGEEMKKNSMKAGVNVHYYEDEAAPTGTC 120
Query: 121 AVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAE 180
AVCVVGGERSL+ANLSAANCYKSEHLKRPE W++VEKAKY+YIAGFFLTVSPESI +VAE
Sbjct: 121 AVCVVGGERSLIANLSAANCYKSEHLKRPENWALVEKAKYFYIAGFFLTVSPESIMLVAE 180
Query: 181 HAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEI 240
HAAA NK+F MNLSAPFICEFF++ QE ALPYMDYVFGNETEARTFAKVHGWET+NVEEI
Sbjct: 181 HAAANNKIFTMNLSAPFICEFFKDVQENALPYMDYVFGNETEARTFAKVHGWETENVEEI 240
Query: 241 ALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVG 300
ALKISQWPKASG HKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVG
Sbjct: 241 ALKISQWPKASGAHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVG 300
Query: 301 GFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
GFLSQLVQEKP+EDCV+ GCYAANV+IQRSGCTYP KP+F+
Sbjct: 301 GFLSQLVQEKPIEDCVKAGCYAANVIIQRSGCTYPEKPDFS 341
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449464370|ref|XP_004149902.1| PREDICTED: adenosine kinase 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/341 (88%), Positives = 323/341 (94%)
Query: 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIA 60
MAYE I+LGMGNPLLDISAVVD FL+ YDIKLNNAILAE+KHLPMY+ELA+K+NVEYIA
Sbjct: 1 MAYEKIILGMGNPLLDISAVVDNAFLQNYDIKLNNAILAEEKHLPMYEELAAKDNVEYIA 60
Query: 61 GGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTC 120
GGATQNSIKVAQWMLQIPGATSYIG IGKDKFGEEMKKNS AGVNV+YYEDE+ PTGTC
Sbjct: 61 GGATQNSIKVAQWMLQIPGATSYIGSIGKDKFGEEMKKNSKLAGVNVQYYEDETTPTGTC 120
Query: 121 AVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAE 180
AVCVVGGERSLVANLSAANCYK+EHLKRPE W++VE+AKYYYIAGFFLTVSPESIQ+VA
Sbjct: 121 AVCVVGGERSLVANLSAANCYKTEHLKRPENWALVEQAKYYYIAGFFLTVSPESIQLVAA 180
Query: 181 HAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEI 240
HAAA NKVF MNLSAPFICEFFR+ QEKALPYMDYVFGNETEARTF+KVHGWETDNVEEI
Sbjct: 181 HAAANNKVFSMNLSAPFICEFFRDVQEKALPYMDYVFGNETEARTFSKVHGWETDNVEEI 240
Query: 241 ALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVG 300
A+KISQWPKASGT KRITVITQGADPVVVAEDGK KLFPVILLPKEKLVDTNGAGDAFVG
Sbjct: 241 AIKISQWPKASGTRKRITVITQGADPVVVAEDGKAKLFPVILLPKEKLVDTNGAGDAFVG 300
Query: 301 GFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
GFLSQLVQEKP+EDCV+ GCYA+NV+IQRSGCTYP KP FN
Sbjct: 301 GFLSQLVQEKPIEDCVKAGCYASNVIIQRSGCTYPEKPNFN 341
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|211906446|gb|ACJ11716.1| adenosine kinase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/340 (89%), Positives = 323/340 (95%)
Query: 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIA 60
MAYEGILLGMGNPLLDIS VVDEEFLKKYDIKLNNAILAE+KHLPMY E+ASK NVEYIA
Sbjct: 1 MAYEGILLGMGNPLLDISLVVDEEFLKKYDIKLNNAILAEEKHLPMYQEMASKPNVEYIA 60
Query: 61 GGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTC 120
GGATQNSIKVAQWMLQIPGAT YIGCIGKDKFGEEMKKNS AAGVNV+Y EDE+APTGTC
Sbjct: 61 GGATQNSIKVAQWMLQIPGATGYIGCIGKDKFGEEMKKNSKAAGVNVQYLEDETAPTGTC 120
Query: 121 AVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAE 180
AVCVVGGERSL+ANLSAANCYKSEHLK+PE W++VEKAKY+YIAGFFLTVSPESIQ+VAE
Sbjct: 121 AVCVVGGERSLIANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPESIQLVAE 180
Query: 181 HAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEI 240
HAAAKNKVF MNLSAPFICEFF++ QEKALPYMD+VFGNETEARTF KVHGWETD+V EI
Sbjct: 181 HAAAKNKVFSMNLSAPFICEFFKDAQEKALPYMDFVFGNETEARTFPKVHGWETDDVAEI 240
Query: 241 ALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVG 300
ALKISQWPKASGT+KR TVITQGADPV+VAEDGKVK FPVILLPKEKLVDTNGAGDAFVG
Sbjct: 241 ALKISQWPKASGTYKRTTVITQGADPVIVAEDGKVKQFPVILLPKEKLVDTNGAGDAFVG 300
Query: 301 GFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEF 340
GFLSQLVQ K +EDCVR GCYA+NV+IQRSGCTYP KPEF
Sbjct: 301 GFLSQLVQGKSIEDCVRAGCYASNVIIQRSGCTYPEKPEF 340
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296086003|emb|CBI31444.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 298/332 (89%), Positives = 319/332 (96%)
Query: 10 MGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIK 69
MGNPLLDIS+VVDEEFL+KYDIKLNNAILAEDKHLPMYDE+ASK NVEYIAGGATQNSI+
Sbjct: 1 MGNPLLDISSVVDEEFLQKYDIKLNNAILAEDKHLPMYDEMASKYNVEYIAGGATQNSIR 60
Query: 70 VAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGER 129
V QWMLQIPGATSY+GCIGKDKFGEEMKKNS AGVNV Y EDE+APTGTCAVCVVGGER
Sbjct: 61 VCQWMLQIPGATSYMGCIGKDKFGEEMKKNSKLAGVNVHYREDETAPTGTCAVCVVGGER 120
Query: 130 SLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVF 189
SL+ANLSAANCYKSEHLKRPE W++VEKAKY+YIAGFFLTVSPESI +VAEHAAA NKVF
Sbjct: 121 SLIANLSAANCYKSEHLKRPENWALVEKAKYFYIAGFFLTVSPESILLVAEHAAANNKVF 180
Query: 190 MMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPK 249
MMNLSAPFICEFF++ QEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIA+KISQWPK
Sbjct: 181 MMNLSAPFICEFFKDQQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIAIKISQWPK 240
Query: 250 ASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE 309
ASGTHKRITVITQGADPVVVAEDGKVK FPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE
Sbjct: 241 ASGTHKRITVITQGADPVVVAEDGKVKSFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE 300
Query: 310 KPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
KP+E+CVR GCYA++V+IQRSGCTYP KP+F+
Sbjct: 301 KPIEECVRAGCYASHVIIQRSGCTYPEKPDFS 332
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296086001|emb|CBI31442.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 629 bits (1621), Expect = e-178, Method: Compositional matrix adjust.
Identities = 295/332 (88%), Positives = 319/332 (96%)
Query: 10 MGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIK 69
MGNPLLDIS+VVDEEFL++YDIKLNNAILAEDKHLPMYDE+ASK NVEYIAGGATQNSI+
Sbjct: 1 MGNPLLDISSVVDEEFLQRYDIKLNNAILAEDKHLPMYDEMASKYNVEYIAGGATQNSIR 60
Query: 70 VAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGER 129
V QWMLQIPGATSY+GCIGKDKFGEEMKKNS AGVNV Y EDE+APTGTCAVCVVGGER
Sbjct: 61 VCQWMLQIPGATSYMGCIGKDKFGEEMKKNSKLAGVNVHYREDETAPTGTCAVCVVGGER 120
Query: 130 SLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVF 189
SL+ANLSAANCYKSEHLKRPE W++VEKAKY+YIAGFFLTVSPESI +VAEHAAA NKVF
Sbjct: 121 SLIANLSAANCYKSEHLKRPENWALVEKAKYFYIAGFFLTVSPESILLVAEHAAANNKVF 180
Query: 190 MMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPK 249
MMNLSAPFICEFF++ QEKALPYMDYVFGNETEARTF++VHGWETDNVEEIA+KISQWPK
Sbjct: 181 MMNLSAPFICEFFKDQQEKALPYMDYVFGNETEARTFSRVHGWETDNVEEIAIKISQWPK 240
Query: 250 ASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE 309
ASGTHKRITVITQGADPVVVAEDGKVK FPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE
Sbjct: 241 ASGTHKRITVITQGADPVVVAEDGKVKSFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE 300
Query: 310 KPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
KP+E+CVR GCYA++V+IQRSGCTYP KP+F+
Sbjct: 301 KPIEECVRAGCYASHVIIQRSGCTYPEKPDFS 332
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 341 | ||||||
| TAIR|locus:2142609 | 345 | ADK2 "adenosine kinase 2" [Ara | 0.994 | 0.982 | 0.840 | 1.3e-157 | |
| TAIR|locus:2085079 | 344 | ADK1 "adenosine kinase 1" [Ara | 0.994 | 0.985 | 0.823 | 5.6e-155 | |
| UNIPROTKB|Q5ZMK9 | 359 | ADK "Uncharacterized protein" | 0.991 | 0.941 | 0.579 | 1.7e-107 | |
| UNIPROTKB|F1S2G5 | 362 | ADK "Uncharacterized protein" | 0.991 | 0.933 | 0.582 | 1.7e-107 | |
| ZFIN|ZDB-GENE-030425-3 | 359 | adka "adenosine kinase a" [Dan | 0.991 | 0.941 | 0.588 | 4.4e-107 | |
| ZFIN|ZDB-GENE-030131-948 | 345 | adkb "adenosine kinase b" [Dan | 0.982 | 0.971 | 0.581 | 1.9e-106 | |
| MGI|MGI:87930 | 361 | Adk "adenosine kinase" [Mus mu | 0.991 | 0.936 | 0.579 | 3.1e-106 | |
| RGD|2046 | 361 | Adk "adenosine kinase" [Rattus | 0.991 | 0.936 | 0.582 | 8.3e-106 | |
| UNIPROTKB|F1PJV5 | 362 | ADK "Uncharacterized protein" | 0.991 | 0.933 | 0.573 | 1.1e-105 | |
| UNIPROTKB|P55263 | 362 | ADK "Adenosine kinase" [Homo s | 0.991 | 0.933 | 0.567 | 4.6e-105 |
| TAIR|locus:2142609 ADK2 "adenosine kinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1536 (545.8 bits), Expect = 1.3e-157, P = 1.3e-157
Identities = 285/339 (84%), Positives = 320/339 (94%)
Query: 3 YEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGG 62
Y+GILLGMGNPLLDISAVVD+EFL KYDIKLNNAILAEDKHLPMYDE++SK NVEYIAGG
Sbjct: 7 YDGILLGMGNPLLDISAVVDDEFLTKYDIKLNNAILAEDKHLPMYDEMSSKFNVEYIAGG 66
Query: 63 ATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAV 122
ATQNSIKVAQWMLQIPGATSY+G IGKDK+GE MKK++TAAGVNV YYEDESAPTGTC V
Sbjct: 67 ATQNSIKVAQWMLQIPGATSYMGSIGKDKYGEAMKKDATAAGVNVHYYEDESAPTGTCGV 126
Query: 123 CVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHA 182
CVVGGERSL+ANLSAANCYK +HLK+PE W++VEKAK+YYIAGFFLTVSPESIQ+V+EHA
Sbjct: 127 CVVGGERSLIANLSAANCYKVDHLKKPENWALVEKAKFYYIAGFFLTVSPESIQLVSEHA 186
Query: 183 AAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIAL 242
AA NKVF MNLSAPFICEFF++ QEK LPYMD+VFGNETEARTF++VHGWET++VE+IA+
Sbjct: 187 AANNKVFTMNLSAPFICEFFKDVQEKFLPYMDFVFGNETEARTFSRVHGWETEDVEQIAI 246
Query: 243 KISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGF 302
KISQ PKA+GT+KR TVITQGADPVVVAEDGKVK +PVI LPKEKLVDTNGAGDAFVGGF
Sbjct: 247 KISQLPKATGTYKRTTVITQGADPVVVAEDGKVKKYPVIPLPKEKLVDTNGAGDAFVGGF 306
Query: 303 LSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
+SQLV+EK +E+CV+ GCYA+NVVIQRSGCTYP KP+FN
Sbjct: 307 MSQLVKEKSIEECVKAGCYASNVVIQRSGCTYPEKPDFN 345
|
|
| TAIR|locus:2085079 ADK1 "adenosine kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1511 (537.0 bits), Expect = 5.6e-155, P = 5.6e-155
Identities = 279/339 (82%), Positives = 314/339 (92%)
Query: 3 YEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGG 62
++GILLGMGNPLLD+SAVVD++FL KYDIKLNNAILAEDKHLPMYDE++ K NVEYIAGG
Sbjct: 6 FDGILLGMGNPLLDVSAVVDQQFLDKYDIKLNNAILAEDKHLPMYDEMSQKFNVEYIAGG 65
Query: 63 ATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAV 122
ATQNSIKVAQWMLQ+PGATSY+G IGKDK+GE MKK++TAAGV V YYEDE+ PTGTC V
Sbjct: 66 ATQNSIKVAQWMLQVPGATSYMGSIGKDKYGEAMKKDATAAGVYVHYYEDEATPTGTCGV 125
Query: 123 CVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHA 182
CV+GGERSL+ANLSAANCYK EHLK+PE W++VEKAK+YYIAGFFLTVSPESIQ+V EHA
Sbjct: 126 CVLGGERSLIANLSAANCYKVEHLKKPENWALVEKAKFYYIAGFFLTVSPESIQLVREHA 185
Query: 183 AAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIAL 242
AA NKVF MNLSAPFICEFF++ QEK LPYMDY+FGNETEARTF++VHGWETD+VE+IA+
Sbjct: 186 AANNKVFTMNLSAPFICEFFKDVQEKCLPYMDYIFGNETEARTFSRVHGWETDDVEQIAI 245
Query: 243 KISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGF 302
K+SQ PKASGT+KR TVITQGADPVVVAEDGKVK +PVI LPKEKLVDTNGAGDAFVGGF
Sbjct: 246 KMSQLPKASGTYKRTTVITQGADPVVVAEDGKVKKYPVIPLPKEKLVDTNGAGDAFVGGF 305
Query: 303 LSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
LSQLV K +E+CVR GCYA+NVVIQRSGCTYP KP+FN
Sbjct: 306 LSQLVHGKGIEECVRAGCYASNVVIQRSGCTYPEKPDFN 344
|
|
| UNIPROTKB|Q5ZMK9 ADK "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1063 (379.3 bits), Expect = 1.7e-107, P = 1.7e-107
Identities = 197/340 (57%), Positives = 257/340 (75%)
Query: 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGA 63
E +L GMGNPLLDI AVVD++FL KY +K N+ ILAE+KH +++EL K VEY AGG+
Sbjct: 20 ENVLFGMGNPLLDICAVVDKDFLDKYGLKPNDQILAEEKHKELFEELVKKFKVEYHAGGS 79
Query: 64 TQNSIKVAQWMLQIP-GATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAV 122
TQNS+KVAQWM+Q P A ++ GCIGKDKFGE +KK + A V+ YYE PTGTCA
Sbjct: 80 TQNSVKVAQWMIQNPYKAATFFGCIGKDKFGEILKKKAEEAHVDAHYYEQSEEPTGTCAA 139
Query: 123 CVVGGERSLVANLSAANCYKSE-HLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEH 181
C+ RSLVANL+AANCYK E HL + W +VEKAK YYIAGFFLTVSPE++ VA
Sbjct: 140 CITSDNRSLVANLAAANCYKKEKHLDLEKNWKLVEKAKVYYIAGFFLTVSPEAVLKVATQ 199
Query: 182 AAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIA 241
A+A NK+F +NLSAPFI +F++EP K +PY+D +FGNETEA TFA+ G+ET++++EIA
Sbjct: 200 ASANNKIFSLNLSAPFISQFYKEPMMKVMPYVDVLFGNETEAATFAREQGFETEDIKEIA 259
Query: 242 LKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGG 301
K PK + +RI + TQG + V+A + +V FPV++ + ++VDTNGAGDAFVGG
Sbjct: 260 RKTQALPKVNTKRQRIVIFTQGKEDTVMATENEVTTFPVLVSDQSEIVDTNGAGDAFVGG 319
Query: 302 FLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
FLSQLV ++PV +C+R G YAA+V+I+RSGCT+P KP+F+
Sbjct: 320 FLSQLVYDRPVTECIRAGHYAASVIIKRSGCTFPEKPDFH 359
|
|
| UNIPROTKB|F1S2G5 ADK "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1063 (379.3 bits), Expect = 1.7e-107, P = 1.7e-107
Identities = 198/340 (58%), Positives = 258/340 (75%)
Query: 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGA 63
E IL GMGNPLLDISAVVD++FL KY +K N+ ILAEDKH ++DEL K VEY AGG+
Sbjct: 23 ENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGS 82
Query: 64 TQNSIKVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAV 122
TQNSIKVAQWM+Q P A ++ GCIG DKFGE +KK + A V+ YYE PTGTCA
Sbjct: 83 TQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKKKAAEAHVDAHYYEQNEQPTGTCAA 142
Query: 123 CVVGGERSLVANLSAANCYKSE-HLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEH 181
C+ GG RSLVANL+AANCYK E HL + W++V+KA+ YYIAGFFLTVSPES+ VA H
Sbjct: 143 CITGGNRSLVANLAAANCYKKEKHLDMEKNWTLVDKARVYYIAGFFLTVSPESVLKVAHH 202
Query: 182 AAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIA 241
A+ N++F +NLSAPFI +F++E K +PY+D +FGNETEA TFA+ G+ET++++EIA
Sbjct: 203 ASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETEDIKEIA 262
Query: 242 LKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGG 301
K PK + +RI + TQG D ++A + +V F V+ ++++VDTNGAGDAFVGG
Sbjct: 263 KKTQALPKVNSKRQRIVIFTQGRDDTILATESEVTAFAVLDQDQKEIVDTNGAGDAFVGG 322
Query: 302 FLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
FLSQLV +KP+ +C+R G YAA+V+I+R+GCT+P KP+F+
Sbjct: 323 FLSQLVFDKPLTECIRAGHYAASVIIRRTGCTFPEKPDFH 362
|
|
| ZFIN|ZDB-GENE-030425-3 adka "adenosine kinase a" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1059 (377.8 bits), Expect = 4.4e-107, P = 4.4e-107
Identities = 200/340 (58%), Positives = 254/340 (74%)
Query: 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGA 63
+ L GMGNPLLDI AVVD++FL KY +K N+ ILAEDKH M++E+ K VEY AGGA
Sbjct: 20 QNALFGMGNPLLDICAVVDKDFLDKYGLKPNDQILAEDKHKEMFEEMVKKFKVEYRAGGA 79
Query: 64 TQNSIKVAQWMLQIP-GATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAV 122
TQNS+KVAQWM+Q P ++ GCIGKDKFG+ +K+ + A V+ YYE PTG+CA
Sbjct: 80 TQNSVKVAQWMIQEPHNVGTFFGCIGKDKFGKILKEKAEEAHVDAHYYEQSEEPTGSCAA 139
Query: 123 CVVGGERSLVANLSAANCYKSE-HLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEH 181
C+ G RSLVANL+AANCYK E HL E W +VEKA+ YYIAGFFLTVS ESI VA+H
Sbjct: 140 CITGDNRSLVANLAAANCYKKEKHLDLEENWKLVEKAQVYYIAGFFLTVSLESILKVAKH 199
Query: 182 AAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIA 241
A+ NK+F +NLSAPFICEFF+E K +PY+D +FGNETEA FA+ G+ET+++EEIA
Sbjct: 200 ASENNKIFCLNLSAPFICEFFKEALMKVMPYVDILFGNETEAAAFAREQGFETEDIEEIA 259
Query: 242 LKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGG 301
K PK + +RI V TQG + V+A+ KV+ FPV+ + + ++VDTNGAGDAFVGG
Sbjct: 260 KKAQSLPKENKKRQRIVVFTQGKEGTVMAKGDKVETFPVLEIDQSEIVDTNGAGDAFVGG 319
Query: 302 FLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
FLSQLVQ+K E C+R G YAANV+I+ +GCT+P KP+F+
Sbjct: 320 FLSQLVQDKTFEQCIRAGHYAANVIIRHAGCTFPEKPDFH 359
|
|
| ZFIN|ZDB-GENE-030131-948 adkb "adenosine kinase b" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1053 (375.7 bits), Expect = 1.9e-106, P = 1.9e-106
Identities = 196/337 (58%), Positives = 254/337 (75%)
Query: 7 LLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQN 66
L GMGNPLLDISAVVD++FL KY +K N+ ILAE+KH ++DE+ +K VEY AGG+TQN
Sbjct: 9 LFGMGNPLLDISAVVDKDFLDKYGLKPNDQILAEEKHKALFDEIVNKSKVEYHAGGSTQN 68
Query: 67 SIKVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV 125
S+K+AQWM+Q P ++ GCIG D FGE +K+ + A V+ YYE PTGTCA C+
Sbjct: 69 SVKIAQWMIQEPHKVATFFGCIGTDHFGEILKQKAAEAHVDAHYYEQNQEPTGTCAACIT 128
Query: 126 GGERSLVANLSAANCY-KSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAA 184
G RSLVANL+AANCY K +HL WS+VEKA+ YYIAGFFLTVSP+SI VA+HA+
Sbjct: 129 GDNRSLVANLAAANCYNKEKHLDIDRNWSLVEKARVYYIAGFFLTVSPDSILKVAKHASD 188
Query: 185 KNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKI 244
NK+F +NLSAPFI +F +EP K LPY+D +FGNETEA TFAK G+ET+++ EIA ++
Sbjct: 189 NNKIFGLNLSAPFISQFSKEPLMKVLPYVDIIFGNETEAATFAKEQGFETEDIAEIAHRV 248
Query: 245 SQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLS 304
PK + +RI V TQG + V KVK+FPV+ + + +VDTNGAGDAFVGGFLS
Sbjct: 249 QNLPKVNKNRQRIVVFTQGREDTVATVGDKVKMFPVLDIDQNDIVDTNGAGDAFVGGFLS 308
Query: 305 QLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
LVQ++P+E+C+R G YAA+V+I+RSGCT+P KP+F+
Sbjct: 309 ALVQDQPLEECIRAGHYAAHVIIRRSGCTFPEKPDFH 345
|
|
| MGI|MGI:87930 Adk "adenosine kinase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1051 (375.0 bits), Expect = 3.1e-106, P = 3.1e-106
Identities = 197/340 (57%), Positives = 253/340 (74%)
Query: 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGA 63
E +L GMGNPLLDISAVVD++FL KY +K N+ ILAEDKH ++DEL K VEY AGG+
Sbjct: 22 ENVLFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGS 81
Query: 64 TQNSIKVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAV 122
TQNS+KVAQW++Q P A ++ GCIG DKFGE +K+ + A V+ YYE PTGTCA
Sbjct: 82 TQNSMKVAQWLIQEPHKAATFFGCIGIDKFGEILKRKAADAHVDAHYYEQNEQPTGTCAA 141
Query: 123 CVVGGERSLVANLSAANCYKSE-HLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEH 181
C+ GG RSLVANL+AANCYK E HL W +VEKA+ YYIAGFFLTVSPES+ VA +
Sbjct: 142 CITGGNRSLVANLAAANCYKKEKHLDLERNWVLVEKARVYYIAGFFLTVSPESVLKVARY 201
Query: 182 AAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIA 241
AA N+VF +NLSAPFI +FF+E +PY+D +FGNETEA TFA+ G+ET +++EIA
Sbjct: 202 AAENNRVFTLNLSAPFISQFFKEALMDVMPYVDILFGNETEAATFAREQGFETKDIKEIA 261
Query: 242 LKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGG 301
K PK + +R + TQG D +VA + V FPV+ +E+++DTNGAGDAFVGG
Sbjct: 262 KKAQALPKVNSKRQRTVIFTQGRDDTIVAAENDVTAFPVLDQNQEEIIDTNGAGDAFVGG 321
Query: 302 FLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
FLSQLV +KP+ +C+R G YAA+V+I+R+GCT+P KP+F+
Sbjct: 322 FLSQLVSDKPLTECIRAGHYAASVIIRRTGCTFPEKPDFH 361
|
|
| RGD|2046 Adk "adenosine kinase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1047 (373.6 bits), Expect = 8.3e-106, P = 8.3e-106
Identities = 198/340 (58%), Positives = 250/340 (73%)
Query: 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGA 63
E +L GMGNPLLDISAVVD++FL KY +K N+ ILAEDKH ++DEL K VEY AGG+
Sbjct: 22 ENVLFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGS 81
Query: 64 TQNSIKVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAV 122
TQNS+KVAQWM+Q P A ++ GCIG DKFGE +K + A V+ YYE PTGTCA
Sbjct: 82 TQNSMKVAQWMIQEPHRAATFFGCIGIDKFGEILKSKAADAHVDAHYYEQNEQPTGTCAA 141
Query: 123 CVVGGERSLVANLSAANCYKSE-HLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEH 181
C+ GG RSLVANL+AANCYK E HL W +VEKA+ YYIAGFFLTVSPES+ VA +
Sbjct: 142 CITGGNRSLVANLAAANCYKKEKHLDLENNWMLVEKARVYYIAGFFLTVSPESVLKVARY 201
Query: 182 AAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIA 241
AA N+ F +NLSAPFI +FF+E + +PY+D +FGNETEA TFA+ G+ET +++EIA
Sbjct: 202 AAENNRTFTLNLSAPFISQFFKEALMEVMPYVDILFGNETEAATFAREQGFETKDIKEIA 261
Query: 242 LKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGG 301
K PK + +R + TQG D +VA V FPV+ +E++VDTNGAGDAFVGG
Sbjct: 262 RKTQALPKVNSKRQRTVIFTQGRDDTIVATGNDVTAFPVLDQNQEEIVDTNGAGDAFVGG 321
Query: 302 FLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
FLSQLV KP+ +C+R G YAA+V+I+R+GCT+P KP+F+
Sbjct: 322 FLSQLVSNKPLTECIRAGHYAASVIIRRTGCTFPEKPDFH 361
|
|
| UNIPROTKB|F1PJV5 ADK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1046 (373.3 bits), Expect = 1.1e-105, P = 1.1e-105
Identities = 195/340 (57%), Positives = 256/340 (75%)
Query: 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGA 63
E IL GMGNPLLDI+AVVD++FL KY +K N+ ILAEDKH ++DEL K VEY AGG+
Sbjct: 23 ENILFGMGNPLLDITAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGS 82
Query: 64 TQNSIKVAQWMLQIP-GATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAV 122
TQNSIKVAQWM+Q P A ++ GCIG D FGE +KK + A V+ YYE TGTCAV
Sbjct: 83 TQNSIKVAQWMIQQPYKAATFFGCIGTDTFGEILKKKAAEAHVDAHYYEQNEQTTGTCAV 142
Query: 123 CVVGGERSLVANLSAANCYKSE-HLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEH 181
C+ G RSLVANL+AANCYK E HL + W++VEKA+ YYIAGFFLTVSPES+ VA H
Sbjct: 143 CITGSNRSLVANLAAANCYKKEKHLDMDKNWTLVEKARVYYIAGFFLTVSPESVLKVANH 202
Query: 182 AAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIA 241
A+ N++F +NLSAPFI +F++E K +PY+D +FGNETEA TFA+ G+ET++++EIA
Sbjct: 203 ASENNRIFTLNLSAPFISQFYKESLMKVMPYIDILFGNETEAATFAREQGFETEDIKEIA 262
Query: 242 LKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGG 301
K PK + +RI + TQG + ++A + +V F V+ ++++VDTNGAGDAFVGG
Sbjct: 263 RKTQALPKVNQKRQRIVIFTQGREDTIMATESEVTAFAVLDQDQKEIVDTNGAGDAFVGG 322
Query: 302 FLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
FLSQLV +KP+ +C+R G YAA+V+I+R+GCT+P KP+F+
Sbjct: 323 FLSQLVSDKPLTECIRAGHYAASVIIRRTGCTFPEKPDFH 362
|
|
| UNIPROTKB|P55263 ADK "Adenosine kinase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1040 (371.2 bits), Expect = 4.6e-105, P = 4.6e-105
Identities = 193/340 (56%), Positives = 254/340 (74%)
Query: 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGA 63
E IL GMGNPLLDISAVVD++FL KY +K N+ ILAEDKH ++DEL K VEY AGG+
Sbjct: 23 ENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGS 82
Query: 64 TQNSIKVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAV 122
TQNSIKVAQWM+Q P A ++ GCIG DKFGE +K+ + A V+ YYE PTGTCA
Sbjct: 83 TQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAA 142
Query: 123 CVVGGERSLVANLSAANCYKSE-HLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEH 181
C+ G RSL+ANL+AANCYK E HL + W +VEKA+ YIAGFFLTVSPES+ VA H
Sbjct: 143 CITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLKVAHH 202
Query: 182 AAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIA 241
A+ N++F +NLSAPFI +F++E K +PY+D +FGNETEA TFA+ G+ET +++EIA
Sbjct: 203 ASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEIA 262
Query: 242 LKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGG 301
K PK + +RI + TQG D ++A + +V F V+ +++++DTNGAGDAFVGG
Sbjct: 263 KKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGG 322
Query: 302 FLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
FLSQLV +KP+ +C+R G YAA+++I+R+GCT+P KP+F+
Sbjct: 323 FLSQLVSDKPLTECIRAGHYAASIIIRRTGCTFPEKPDFH 362
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| O49923 | ADK_PHYPA | 2, ., 7, ., 1, ., 2, 0 | 0.6676 | 0.9970 | 0.9912 | N/A | no |
| P55262 | ADK_CRIGR | 2, ., 7, ., 1, ., 2, 0 | 0.5735 | 0.9912 | 0.9362 | yes | no |
| P55264 | ADK_MOUSE | 2, ., 7, ., 1, ., 2, 0 | 0.5794 | 0.9912 | 0.9362 | yes | no |
| P47143 | ADK_YEAST | 2, ., 7, ., 1, ., 2, 0 | 0.3910 | 0.9442 | 0.9470 | yes | no |
| Q9LZG0 | ADK2_ARATH | 2, ., 7, ., 1, ., 2, 0 | 0.8407 | 0.9941 | 0.9826 | yes | no |
| Q54MB5 | ADK_DICDI | 2, ., 7, ., 1, ., 2, 0 | 0.4332 | 0.9736 | 0.9764 | yes | no |
| Q64640 | ADK_RAT | 2, ., 7, ., 1, ., 2, 0 | 0.5823 | 0.9912 | 0.9362 | yes | no |
| P78825 | ADK_SCHPO | 2, ., 7, ., 1, ., 2, 0 | 0.4378 | 0.9677 | 0.9705 | yes | no |
| Q9SF85 | ADK1_ARATH | 2, ., 7, ., 1, ., 2, 0 | 0.8230 | 0.9941 | 0.9854 | no | no |
| P55263 | ADK_HUMAN | 2, ., 7, ., 1, ., 2, 0 | 0.5676 | 0.9912 | 0.9337 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 341 | |||
| PLN02548 | 332 | PLN02548, PLN02548, adenosine kinase | 0.0 | |
| PTZ00247 | 345 | PTZ00247, PTZ00247, adenosine kinase; Provisional | 1e-167 | |
| cd01168 | 312 | cd01168, adenosine_kinase, Adenosine kinase (AK) c | 1e-139 | |
| pfam00294 | 298 | pfam00294, PfkB, pfkB family carbohydrate kinase | 2e-69 | |
| COG0524 | 311 | COG0524, RbsK, Sugar kinases, ribokinase family [C | 1e-45 | |
| cd01174 | 292 | cd01174, ribokinase, Ribokinase catalyses the phos | 1e-32 | |
| cd01166 | 294 | cd01166, KdgK, 2-keto-3-deoxygluconate kinase (Kdg | 1e-31 | |
| TIGR02152 | 293 | TIGR02152, D_ribokin_bact, ribokinase | 6e-26 | |
| cd01942 | 279 | cd01942, ribokinase_group_A, Ribokinase-like subgr | 7e-22 | |
| cd01167 | 295 | cd01167, bac_FRK, Fructokinases (FRKs) mainly from | 1e-18 | |
| cd01941 | 288 | cd01941, YeiC_kinase_like, YeiC-like sugar kinase | 1e-16 | |
| PLN02379 | 367 | PLN02379, PLN02379, pfkB-type carbohydrate kinase | 4e-16 | |
| cd00287 | 196 | cd00287, ribokinase_pfkB_like, ribokinase/pfkB sup | 2e-14 | |
| PTZ00292 | 326 | PTZ00292, PTZ00292, ribokinase; Provisional | 4e-12 | |
| PRK11142 | 306 | PRK11142, PRK11142, ribokinase; Provisional | 5e-12 | |
| cd01944 | 289 | cd01944, YegV_kinase_like, YegV-like sugar kinase | 2e-11 | |
| cd01940 | 264 | cd01940, Fructoselysine_kinase_like, Fructoselysin | 7e-10 | |
| PRK09434 | 304 | PRK09434, PRK09434, aminoimidazole riboside kinase | 8e-09 | |
| PRK09813 | 260 | PRK09813, PRK09813, fructoselysine 6-kinase; Provi | 4e-08 | |
| cd01943 | 328 | cd01943, MAK32, MAK32 kinase | 7e-08 | |
| cd01945 | 284 | cd01945, ribokinase_group_B, Ribokinase-like subgr | 6e-07 | |
| cd01164 | 289 | cd01164, FruK_PfkB_like, 1-phosphofructokinase (Fr | 7e-07 | |
| cd01947 | 265 | cd01947, Guanosine_kinase_like, Guanosine kinase-l | 9e-07 | |
| COG1105 | 310 | COG1105, FruK, Fructose-1-phosphate kinase and rel | 1e-06 | |
| PLN02813 | 426 | PLN02813, PLN02813, pfkB-type carbohydrate kinase | 2e-06 | |
| TIGR03168 | 303 | TIGR03168, 1-PFK, hexose kinase, 1-phosphofructoki | 2e-06 | |
| PLN02323 | 330 | PLN02323, PLN02323, probable fructokinase | 1e-05 | |
| cd01937 | 254 | cd01937, ribokinase_group_D, Ribokinase-like subgr | 3e-05 | |
| cd01172 | 304 | cd01172, RfaE_like, RfaE encodes a bifunctional AD | 9e-05 | |
| TIGR03828 | 304 | TIGR03828, pfkB, 1-phosphofructokinase | 2e-04 | |
| cd01939 | 290 | cd01939, Ketohexokinase, Ketohexokinase (fructokin | 5e-04 | |
| PRK09434 | 304 | PRK09434, PRK09434, aminoimidazole riboside kinase | 0.001 | |
| PLN02630 | 335 | PLN02630, PLN02630, pfkB-type carbohydrate kinase | 0.001 | |
| cd01946 | 277 | cd01946, ribokinase_group_C, Ribokinase-like subgr | 0.003 |
| >gnl|CDD|178163 PLN02548, PLN02548, adenosine kinase | Back alignment and domain information |
|---|
Score = 698 bits (1804), Expect = 0.0
Identities = 280/332 (84%), Positives = 305/332 (91%)
Query: 10 MGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIK 69
MGNPLLDISAVVD++FL KYD+KLNNAILAE+KHLPMYDELASK NVEYIAGGATQNSI+
Sbjct: 1 MGNPLLDISAVVDQDFLDKYDVKLNNAILAEEKHLPMYDELASKYNVEYIAGGATQNSIR 60
Query: 70 VAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGER 129
VAQWMLQIPGATSY+GCIGKDKFGEEMKK +TAAGVNV YYEDES PTGTCAV VVGGER
Sbjct: 61 VAQWMLQIPGATSYMGCIGKDKFGEEMKKCATAAGVNVHYYEDESTPTGTCAVLVVGGER 120
Query: 130 SLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVF 189
SLVANLSAANCYK EHLK+PE W++VEKAK+YYIAGFFLTVSPESI +VAEHAAA NK F
Sbjct: 121 SLVANLSAANCYKVEHLKKPENWALVEKAKFYYIAGFFLTVSPESIMLVAEHAAANNKTF 180
Query: 190 MMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPK 249
MMNLSAPFICEFF++ +ALPY+D++FGNETEARTFAKV GWET++VEEIALKIS PK
Sbjct: 181 MMNLSAPFICEFFKDQLMEALPYVDFLFGNETEARTFAKVQGWETEDVEEIALKISALPK 240
Query: 250 ASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE 309
ASGTHKR VITQGADP VVAEDGKVK FPVI LPKEKLVDTNGAGDAFVGGFLSQLVQ
Sbjct: 241 ASGTHKRTVVITQGADPTVVAEDGKVKEFPVIPLPKEKLVDTNGAGDAFVGGFLSQLVQG 300
Query: 310 KPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
K +E+CVR G YAANV+IQRSGCTYP KP+F+
Sbjct: 301 KDIEECVRAGNYAANVIIQRSGCTYPEKPDFS 332
|
Length = 332 |
| >gnl|CDD|240328 PTZ00247, PTZ00247, adenosine kinase; Provisional | Back alignment and domain information |
|---|
Score = 469 bits (1209), Expect = e-167
Identities = 176/341 (51%), Positives = 235/341 (68%), Gaps = 1/341 (0%)
Query: 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIA 60
+ LLG GNPLLDISA V +EFL+KY ++L +AILAE+K LP+++EL S NV Y+
Sbjct: 2 SSAPKKLLGFGNPLLDISAHVSDEFLEKYGLELGSAILAEEKQLPIFEELESIPNVSYVP 61
Query: 61 GGATQNSIKVAQWMLQIP-GATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGT 119
GG+ N+ +VAQWMLQ P G Y+GC+G D+F E +K+ + GV + + APTGT
Sbjct: 62 GGSALNTARVAQWMLQAPKGFVCYVGCVGDDRFAEILKEAAEKDGVEMLFEYTTKAPTGT 121
Query: 120 CAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVA 179
CAV V G ERSLVANL AAN +EH++ + ++ A+ YY+ GFFLTVSP ++ VA
Sbjct: 122 CAVLVCGKERSLVANLGAANHLSAEHMQSHAVQEAIKTAQLYYLEGFFLTVSPNNVLQVA 181
Query: 180 EHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEE 239
+HA K+F +NLSAPFI +FF E + LPY+D +FGNE EA+TFAK W+T++++E
Sbjct: 182 KHARESGKLFCLNLSAPFISQFFFERLLQVLPYVDILFGNEEEAKTFAKAMKWDTEDLKE 241
Query: 240 IALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFV 299
IA +I+ PK SGT R+ V TQG +P ++A V PV L +EK+VDTNGAGDAFV
Sbjct: 242 IAARIAMLPKYSGTRPRLVVFTQGPEPTLIATKDGVTSVPVPPLDQEKIVDTNGAGDAFV 301
Query: 300 GGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEF 340
GGFL+Q K ++ CV G Y+A V+IQ +GCTYP KP F
Sbjct: 302 GGFLAQYANGKDIDRCVEAGHYSAQVIIQHNGCTYPEKPPF 342
|
Length = 345 |
| >gnl|CDD|238573 cd01168, adenosine_kinase, Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor | Back alignment and domain information |
|---|
Score = 395 bits (1018), Expect = e-139
Identities = 149/333 (44%), Positives = 200/333 (60%), Gaps = 22/333 (6%)
Query: 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGA 63
+LG+GN L+DI A VD+ FL+K +K + ILA + +EL +K V+YIAGG+
Sbjct: 1 RYDVLGLGNALVDILAQVDDAFLEKLGLKKGDMILA---DMEEQEELLAKLPVKYIAGGS 57
Query: 64 TQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVC 123
N+I+ A + G+ ++IG +G DK G+ + K+ AAGV+ +Y PTGTCAV
Sbjct: 58 AANTIRGAAALG---GSAAFIGRVGDDKLGDFLLKDLRAAGVDTRYQVQPDGPTGTCAVL 114
Query: 124 V-VGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHA 182
V ER++ L AAN + L WS++ KAKY Y+ G+ LTV PE+I + AEHA
Sbjct: 115 VTPDAERTMCTYLGAANELSPDDL----DWSLLAKAKYLYLEGYLLTVPPEAILLAAEHA 170
Query: 183 AAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIAL 242
+NLSAPFI + F+E + LPY+D +FGNE EA A+ ET + E AL
Sbjct: 171 KENGVKIALNLSAPFIVQRFKEALLELLPYVDILFGNEEEAEALAEA---ETTDDLEAAL 227
Query: 243 KISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGF 302
K+ RI VITQGA VV E G+V +PV +P EK+VDTNGAGDAF GGF
Sbjct: 228 KLLA------LRCRIVVITQGAKGAVVVEGGEV--YPVPAIPVEKIVDTNGAGDAFAGGF 279
Query: 303 LSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYP 335
L LVQ +P+E+C+R G YAA VIQ+ G P
Sbjct: 280 LYGLVQGEPLEECIRLGSYAAAEVIQQLGPRLP 312
|
The physiological function of AK is associated with the regulation of extracellular adenosine levels and the preservation of intracellular adenylate pools. Adenosine kinase is involved in the purine salvage pathway. . Length = 312 |
| >gnl|CDD|215842 pfam00294, PfkB, pfkB family carbohydrate kinase | Back alignment and domain information |
|---|
Score = 218 bits (558), Expect = 2e-69
Identities = 83/311 (26%), Positives = 123/311 (39%), Gaps = 23/311 (7%)
Query: 28 KYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCI 87
+ I + EL + VE AGGA N + G ++IG +
Sbjct: 6 VIGEANIDLIGRVEGL---EGELNRVKTVEKGAGGAGANVAVALARLG---GEVTFIGKV 59
Query: 88 GKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCV-VGGERSLVANLSAANCYKSEH 145
G D FGE + + GV+ Y DE TG + V GER++ AA E
Sbjct: 60 GDDNFGEFLLELLKKEGVDTDYVVIDEDTRTGLALILVDGDGERTINFYRGAAADLTPEE 119
Query: 146 LKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREP 205
L ++E A Y++G PE+ AA F NL P E
Sbjct: 120 L----PEDLLENADILYLSGSLPLPLPEATLEELIEAAKNGGTFDPNLRDPLWA--DLEV 173
Query: 206 QEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGAD 265
+ LP D + NE E + + K ++ + V+T GAD
Sbjct: 174 LLELLPLADILKPNEEELEALTGEKINDIEEALAALHKHAK-------GVKTVVVTLGAD 226
Query: 266 PVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANV 325
++ + V +PK K+VDT GAGDAFV GFL+ L+ K +E+ +R A +
Sbjct: 227 GALLVD--GDGEVHVPPVPKVKVVDTTGAGDAFVAGFLAGLLAGKSLEEALRFANAVAAL 284
Query: 326 VIQRSGCTYPP 336
V+Q++G
Sbjct: 285 VVQKTGAISSL 295
|
This family includes a variety of carbohydrate and pyrimidine kinases. Length = 298 |
| >gnl|CDD|223598 COG0524, RbsK, Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 157 bits (398), Expect = 1e-45
Identities = 91/333 (27%), Positives = 132/333 (39%), Gaps = 42/333 (12%)
Query: 7 LLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQN 66
++ +G +D+ A V + P E + + GG N
Sbjct: 2 VVVIGEANVDLIAQVVDRL-------------------PEPGETVLGDFFKVAGGGKGAN 42
Query: 67 SIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPTGTCAVCVV 125
VA + ++ + IG +G D FGE + + GV+ + DE A TG + V
Sbjct: 43 ---VAVALARLGAKVALIGAVGDDDFGEFLLEELRKEGVDTSHVVTDEGATTGLALILVD 99
Query: 126 G-GERSLVANLSAANCYKSEHLKRPEI--WSIVEKAKYYYIAGFFLTVSPESIQMVAEHA 182
GER+ V AA L PE + A +I+G L + PE++ E A
Sbjct: 100 EDGERTFVFYRGAAA-----LLLTPEDLDEDELAGADVLHISGIQLEIPPEALLAALELA 154
Query: 183 AAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIAL 242
A +L+ +E L D +F NE EA G E D AL
Sbjct: 155 KAAGVTVSFDLNPRPALWDRELLEE-LLALADILFPNEEEAELLT---GLEEDAEAAAAL 210
Query: 243 KISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGF 302
A G + V+T GA+ VV G PV K K+VDT GAGDAF GF
Sbjct: 211 L-----LAKGV--KTVVVTLGAEGAVVFTGGGEVTVPVPAAFKVKVVDTTGAGDAFAAGF 263
Query: 303 LSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYP 335
L+ L++ K +E+ +R AA + + R G
Sbjct: 264 LAGLLEGKSLEEALRFANAAAALAVTRPGARPS 296
|
Length = 311 |
| >gnl|CDD|238579 cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP | Back alignment and domain information |
|---|
Score = 122 bits (309), Expect = 1e-32
Identities = 70/263 (26%), Positives = 110/263 (41%), Gaps = 42/263 (15%)
Query: 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPTGTCAVCVV--GGERSLV----A 133
+ IG +G D FG+E+ +N G++V Y APTGT AV V GE +V A
Sbjct: 53 VAMIGAVGDDAFGDELLENLREEGIDVSYVEVVVGAPTGT-AVITVDESGENRIVVVPGA 111
Query: 134 N--LSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLT---VSPESIQMVAEHAAAKNKV 188
N L+ A+ + L I A L + E++ A
Sbjct: 112 NGELTPADVDAALEL-------IAA-------ADVLLLQLEIPLETVLAALRAARRAGVT 157
Query: 189 FMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWP 248
++N AP R + L +D + NETEA + + ++ E+ A +
Sbjct: 158 VILN-PAPA-----RPLPAELLALVDILVPNETEAALLTGIEVTDEEDAEKAARLLLAKG 211
Query: 249 KASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQ 308
+ ++T GA ++A G+V+ P K K VDT GAGD F+G + L +
Sbjct: 212 V------KNVIVTLGAKGALLASGGEVEHVPAF---KVKAVDTTGAGDTFIGALAAALAR 262
Query: 309 EKPVEDCVRTGCYAANVVIQRSG 331
+E+ +R AA + + R G
Sbjct: 263 GLSLEEAIRFANAAAALSVTRPG 285
|
This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution. Length = 292 |
| >gnl|CDD|238571 cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP) | Back alignment and domain information |
|---|
Score = 120 bits (303), Expect = 1e-31
Identities = 82/299 (27%), Positives = 127/299 (42%), Gaps = 33/299 (11%)
Query: 47 YDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVN 106
L ++ GGA N VA + ++ + + +G D FG + GV+
Sbjct: 17 GGRLEQADSFRKFFGGAEAN---VAVGLARLGHRVALVTAVGDDPFGRFILAELRREGVD 73
Query: 107 VKYYE-DESAPTGTCAV-CVVGGERSLV---ANLSAANCYKSEHLKRPEIWSIVEKAKYY 161
+ D PTG + GGER ++ A SAA+ E L + + A +
Sbjct: 74 TSHVRVDPGRPTGLYFLEIGAGGERRVLYYRAG-SAASRLTPEDLD----EAALAGADHL 128
Query: 162 YIAGFFLTVSPESIQMVAE-HAAAKNK----VFMMNLSAPFIC-EFFREPQEKALPYMDY 215
+++G L +S + + + E AAK + F +N E RE E+ LPY+D
Sbjct: 129 HLSGITLALSESAREALLEALEAAKARGVTVSFDLNYRPKLWSAEEAREALEELLPYVDI 188
Query: 216 VFGNETEARTFAKVHGWETDN-VEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGK 274
V +E EA G E E AL ++ KA V+ GA+ +V G
Sbjct: 189 VLPSEEEAEALL---GDEDPTDAAERALALALGVKA-------VVVKLGAEGALVYTGGG 238
Query: 275 VKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCT 333
P ++VDT GAGDAF GFL+ L++ +E+ +R AA +V+ R G
Sbjct: 239 RVFVPA---YPVEVVDTTGAGDAFAAGFLAGLLEGWDLEEALRFANAAAALVVTRPGDI 294
|
KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources. Length = 294 |
| >gnl|CDD|233751 TIGR02152, D_ribokin_bact, ribokinase | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 6e-26
Identities = 67/267 (25%), Positives = 116/267 (43%), Gaps = 23/267 (8%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPTGTCAVCVV-GGERSLVANLS 136
S IG +G D FG+E+ +N + G++ +Y + PTGT + V GE +V
Sbjct: 46 AEVSMIGKVGDDAFGDELLENLKSNGIDTEYVGTVKDTPTGTAFITVDDTGENRIVVVAG 105
Query: 137 AANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAP 196
A E + +++ ++ + L + E++ A+ A ++N AP
Sbjct: 106 ANAELTPEDIDA--AEALIAESDIVLLQ---LEIPLETVLEAAKIAKKHGVKVILN-PAP 159
Query: 197 FICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKR 256
I ++ ++ L +D + NETEA + + ++ E+ A K+ + +
Sbjct: 160 AI----KDLDDELLSLVDIITPNETEAEILTGIEVTDEEDAEKAAEKLLE------KGVK 209
Query: 257 ITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCV 316
+IT G+ ++ + KL P K K VDT AGD F G F L + K +ED +
Sbjct: 210 NVIITLGSKGALLVSKDESKLIPAF---KVKAVDTTAAGDTFNGAFAVALAEGKSLEDAI 266
Query: 317 RTGCYAANVVIQRSGC--TYPPKPEFN 341
R AA + + R G + P E
Sbjct: 267 RFANAAAAISVTRKGAQSSIPYLEEVE 293
|
This model describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences, few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not [Energy metabolism, Sugars]. Length = 293 |
| >gnl|CDD|238917 cd01942, ribokinase_group_A, Ribokinase-like subgroup A | Back alignment and domain information |
|---|
Score = 93.1 bits (232), Expect = 7e-22
Identities = 60/254 (23%), Positives = 100/254 (39%), Gaps = 36/254 (14%)
Query: 84 IGCIGKDKFGEEMKKNSTAAGVN---VKYYEDESAPTGTCAVCVVGGERSLVANLSAANC 140
+ +G+D G + GV+ V+ +++S TG + G + + A
Sbjct: 56 VAAVGEDFHGRLYLEELREEGVDTSHVRVVDEDS--TGVAFILTDGDDNQIAYFYPGAM- 112
Query: 141 YKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAP--FI 198
+ ++A +A V S + E A + P +
Sbjct: 113 ---------DELEPNDEADPDGLADI---VHLSSGPGLIELARELAAGGITVSFDPGQEL 160
Query: 199 CEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRIT 258
E E+ L D +F N+ EA + G E+A + R+
Sbjct: 161 PRLSGEELEEILERADILFVNDYEAELLKERTGLSE---AELASGV-----------RVV 206
Query: 259 VITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRT 318
V+T G +V EDG+ P + P K+VDT GAGDAF GFL L++ +E+ +R
Sbjct: 207 VVTLGPKGAIVFEDGEEVEVPAV--PAVKVVDTTGAGDAFRAGFLYGLLRGYDLEESLRL 264
Query: 319 GCYAANVVIQRSGC 332
G AA++ ++R G
Sbjct: 265 GNLAASLKVERRGA 278
|
Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. Length = 279 |
| >gnl|CDD|238572 cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate | Back alignment and domain information |
|---|
Score = 84.6 bits (210), Expect = 1e-18
Identities = 73/292 (25%), Positives = 121/292 (41%), Gaps = 45/292 (15%)
Query: 60 AGGATQN-SIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPT 117
GGA N ++ +A L A +IG +G D+FG+ + + AGV+ + D +APT
Sbjct: 27 PGGAPANVAVALA--RLGGKAA--FIGKVGDDEFGDFLLETLKEAGVDTRGIQFDPAAPT 82
Query: 118 GTCAVCVVG-GERSLVANLSAANCYKSEHLKRPEI-WSIVEKAKYYYIAGFFLTVSP--E 173
V + GERS A ++ L E+ ++ +A + L P
Sbjct: 83 TLAFVTLDADGERSFEFYRGPA----ADLLLDTELNPDLLSEADILHFGSIALASEPSRS 138
Query: 174 SIQMVAEHAAAKNKV--FMMNLSAPFIC--EFFREPQEKALPYMDYVFGNETEARTFAKV 229
++ + E A + F NL P E RE + L D V ++ E
Sbjct: 139 ALLELLEAAKKAGVLISFDPNLRPPLWRDEEEARERIAELLELADIVKLSDEELELLFG- 197
Query: 230 HGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVV---AEDGKVKLFPVILLPKE 286
++ EEIA + + + ++T+GAD ++ G+V PV
Sbjct: 198 ----EEDPEEIAALLLLFGLK------LVLVTRGADGALLYTKGGVGEVPGIPV------ 241
Query: 287 KLVDTNGAGDAFVGGFLSQLVQ-------EKPVEDCVRTGCYAANVVIQRSG 331
++VDT GAGDAFV G L+QL+ E + + +R + ++G
Sbjct: 242 EVVDTTGAGDAFVAGLLAQLLSRGLLALDEDELAEALRFANAVGALTCTKAG 293
|
This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate. Length = 295 |
| >gnl|CDD|238916 cd01941, YeiC_kinase_like, YeiC-like sugar kinase | Back alignment and domain information |
|---|
Score = 78.5 bits (194), Expect = 1e-16
Identities = 62/259 (23%), Positives = 107/259 (41%), Gaps = 34/259 (13%)
Query: 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTC-AVCVVGGERSLVANLSAAN 139
+ + +G D GE + + S AG+NV+ E T + A+ G+ LV L+ +
Sbjct: 52 VALLSAVGDDSEGESILEESEKAGLNVRGIVFEGRSTASYTAILDKDGD--LVVALADMD 109
Query: 140 CYKSEHL---KRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAP 196
Y E L +I +++AK + + E+++ + AA P
Sbjct: 110 IY--ELLTPDFLRKIREALKEAKPIVVDA---NLPEEALEYLLALAAKHG--------VP 156
Query: 197 FICEFFREPQEKALPY----MDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASG 252
E P+ K L Y +D + N E A E K ++ G
Sbjct: 157 VAFEPTSAPKLKKLFYLLHAIDLLTPNRAELEALAGA----LIENNEDENKAAKILLLPG 212
Query: 253 THKRITVITQGADPVVV---AEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE 309
K + ++T GA V++ + KLFP E +V+ GAGDAFV G ++ L++
Sbjct: 213 -IKNV-IVTLGAKGVLLSSREGGVETKLFPAPQ--PETVVNVTGAGDAFVAGLVAGLLEG 268
Query: 310 KPVEDCVRTGCYAANVVIQ 328
++D +R AA + ++
Sbjct: 269 MSLDDSLRFAQAAAALTLE 287
|
Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. Length = 288 |
| >gnl|CDD|178005 PLN02379, PLN02379, pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Score = 78.3 bits (193), Expect = 4e-16
Identities = 77/307 (25%), Positives = 134/307 (43%), Gaps = 37/307 (12%)
Query: 35 NAILAE-DKH-LPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKF 92
IL E + H LP D+L+ ++ +AGG+ N+I+ + +T IG G D+
Sbjct: 61 EHILREVNAHILPSPDDLSP---IKTMAGGSVANTIRGLSAGFGV--STGIIGACGDDEQ 115
Query: 93 GEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVG--GERSLVANLSAANCYKSEHLKRPE 150
G+ N +GV++ + PT C VC+V G R++ LS+A +++ L + +
Sbjct: 116 GKLFVSNMGFSGVDLSRLRAKKGPTAQC-VCLVDALGNRTMRPCLSSAVKLQADELTKED 174
Query: 151 I----WSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQ 206
W ++ Y + E I+ A + ++L++ + FR P
Sbjct: 175 FKGSKWLVLRYGFY----------NLEVIEAAIRLAKQEGLSVSLDLASFEMVRNFRSPL 224
Query: 207 EKALPY--MDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGA 264
+ L +D F NE EAR ++ E ++ E AL+ + V+T G+
Sbjct: 225 LQLLESGKIDLCFANEDEAR---ELLRGEQESDPEAALEFL------AKYCNWAVVTLGS 275
Query: 265 DPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAAN 324
+ +V P I + VD GAGD F GFL L++ +E+C + G +
Sbjct: 276 KGCIARHGKEVVRVPAI--GETNAVDATGAGDLFASGFLYGLIKGLSLEECCKVGACSGG 333
Query: 325 VVIQRSG 331
V++ G
Sbjct: 334 SVVRALG 340
|
Length = 367 |
| >gnl|CDD|238177 cd00287, ribokinase_pfkB_like, ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group | Back alignment and domain information |
|---|
Score = 70.2 bits (172), Expect = 2e-14
Identities = 36/140 (25%), Positives = 55/140 (39%), Gaps = 9/140 (6%)
Query: 168 LTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFA 227
L+ +PE++ E A + +++ P E EK LP +D + NE EA
Sbjct: 66 LSPAPEAVLDALEEARRRGVPVVLDP-GPRAVRLDGEELEKLLPGVDILTPNEEEAEALT 124
Query: 228 KVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEK 287
E E A + ++ ++T G +VA G V K
Sbjct: 125 GRRDLEVKEAAEAAALLLSK------GPKVVIVTLGEKGAIVATRGGT-EVHV-PAFPVK 176
Query: 288 LVDTNGAGDAFVGGFLSQLV 307
+VDT GAGDAF+ + L
Sbjct: 177 VVDTTGAGDAFLAALAAGLA 196
|
The superfamily includes ribokinase, fructokinase, ketohexokinase, 2-dehydro-3-deoxygluconokinase, 1-phosphofructokinase, the minor 6-phosphofructokinase (PfkB), inosine-guanosine kinase, and adenosine kinase. Even though there is a high degree of structural conservation within this superfamily, their multimerization level varies widely, monomeric (e.g. adenosine kinase), dimeric (e.g. ribokinase), and trimeric (e.g THZ kinase). Length = 196 |
| >gnl|CDD|185541 PTZ00292, PTZ00292, ribokinase; Provisional | Back alignment and domain information |
|---|
Score = 65.9 bits (161), Expect = 4e-12
Identities = 63/270 (23%), Positives = 105/270 (38%), Gaps = 26/270 (9%)
Query: 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPTGTCAVCVVGGERSLVANLSAAN 139
+ +G +G D FG + KN GVN + E++ TG A+ V + N
Sbjct: 69 VAMVGMVGTDGFGSDTIKNFKRNGVNTSFVSRTENSSTG-LAMIFVDTKTG---NNEIVI 124
Query: 140 CYKSEHLKRPEI----WSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSA 195
+ + P++ ++ Y I + E+ + A + + N A
Sbjct: 125 IPGANNALTPQMVDAQTDNIQNICKYLICQ--NEIPLETTLDALKEAKERGCYTVFN-PA 181
Query: 196 PFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHK 255
P E + L Y+ NE EA A + G E + E A K S+ + G
Sbjct: 182 PAPKLAEVEIIKPFLKYVSLFCVNEVEA---ALITGMEVTD-TESAFKASKELQQLGVEN 237
Query: 256 RITVITQGADPVVVAEDGKVKLFPVILLPKE--KLVDTNGAGDAFVGGFLSQLVQEKPVE 313
+IT GA+ ++ E + +P + K VDT GAGD FVG + + K ++
Sbjct: 238 --VIITLGANGCLIVEKEN----EPVHVPGKRVKAVDTTGAGDCFVGSMAYFMSRGKDLK 291
Query: 314 DCVRTGCYAANVVIQRSGC--TYPPKPEFN 341
+ + A + + R G +YP E
Sbjct: 292 ESCKRANRIAAISVTRHGTQSSYPHPSELP 321
|
Length = 326 |
| >gnl|CDD|236858 PRK11142, PRK11142, ribokinase; Provisional | Back alignment and domain information |
|---|
Score = 65.3 bits (160), Expect = 5e-12
Identities = 61/255 (23%), Positives = 108/255 (42%), Gaps = 26/255 (10%)
Query: 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVVG-GERSLVANLSAA 138
++I C+G D GE M++ G++ + TG + V GE S+ + A
Sbjct: 56 IAFIACVGDDSIGESMRQQLAKDGIDTAPVSVIKGESTGVALIFVNDEGENSIGIHAGAN 115
Query: 139 NCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFI 198
++ ++ A + L E++ A+ A ++N AP
Sbjct: 116 AALTPALVEAHR--ELIANADALLMQ---LETPLETVLAAAKIAKQHGTKVILN-PAPA- 168
Query: 199 CEFFREPQEKALPYMDYVFGNETEAR--TFAKVHGWETDNVEEIALKISQWPKASGTHKR 256
RE ++ L +D + NETEA T +V ++ A K +Q G
Sbjct: 169 ----RELPDELLALVDIITPNETEAEKLTGIRVED------DDDAAKAAQVLHQKGIE-- 216
Query: 257 ITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCV 316
+IT G+ V ++E+G+ + P + + VDT AGD F G ++ L++ KP+ + +
Sbjct: 217 TVLITLGSRGVWLSENGEGQRVPG---FRVQAVDTIAAGDTFNGALVTALLEGKPLPEAI 273
Query: 317 RTGCYAANVVIQRSG 331
R AA + + R G
Sbjct: 274 RFAHAAAAIAVTRKG 288
|
Length = 306 |
| >gnl|CDD|238919 cd01944, YegV_kinase_like, YegV-like sugar kinase | Back alignment and domain information |
|---|
Score = 63.2 bits (154), Expect = 2e-11
Identities = 66/279 (23%), Positives = 106/279 (37%), Gaps = 27/279 (9%)
Query: 58 YIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPT 117
Y+ GG ++ VA L IP T G +G + +++++ G+ +
Sbjct: 33 YVIGGGF--NVMVAASRLGIP--TVNAGPLGNGNWADQIRQAMRDEGIEILL-PPRGGDD 87
Query: 118 GTCAVCVV--GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESI 175
G C V +V GERS ++ A + +E V Y Y++G+ L S
Sbjct: 88 GGCLVALVEPDGERSFISISGAEQDWSTEWFATLT----VAPYDYVYLSGYTLASENASK 143
Query: 176 QMVAE--HAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWE 233
++ E A + + P I + + + N EA FA+
Sbjct: 144 VILLEWLEALPAGTTLVFDPG-PRISDIPDTILQALMAKRPIWSCNREEAAIFAE----R 198
Query: 234 TDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAE-DGKVKLFPVILLPKEKLVDTN 292
D E + A+ V+ G++ + DG + P K K VDT
Sbjct: 199 GDPAAEASALRIYAKTAAPV-----VVRLGSNGAWIRLPDGNTHIIPGF---KVKAVDTI 250
Query: 293 GAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSG 331
GAGD GG L+ L + + D V AA +V+ RSG
Sbjct: 251 GAGDTHAGGMLAGLAKGMSLADAVLLANAAAAIVVTRSG 289
|
Found only in bacteria, YegV-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. Length = 289 |
| >gnl|CDD|238915 cd01940, Fructoselysine_kinase_like, Fructoselysine kinase-like | Back alignment and domain information |
|---|
Score = 58.5 bits (142), Expect = 7e-10
Identities = 61/271 (22%), Positives = 110/271 (40%), Gaps = 48/271 (17%)
Query: 66 NSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV 125
N++ VA + ++ ++YIG +G D G ++ GV++ + + V +V
Sbjct: 24 NALNVAVYAKRLGHESAYIGAVGNDDAGAHVRSTLKRLGVDISHCRVKEGENAVADVELV 83
Query: 126 GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFL---------TVSPESIQ 176
G+R LS EH +A Y++ F L +++Q
Sbjct: 84 DGDRIFG--LSNKGGVAREHP---------FEADLEYLSQFDLVHTGIYSHEGHLEKALQ 132
Query: 177 MVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDN 236
+ A + F ++ + PY+D+ F + ++ +D
Sbjct: 133 ALVGAGALISFDFSDRWDDDYL--------QLVCPYVDFAFFSASD----------LSDE 174
Query: 237 VEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGD 296
+ LK +A ++ ++T+G D + A DG V + V P E +VDT GAGD
Sbjct: 175 EVKAKLK-----EAVSRGAKLVIVTRGEDGAI-AYDGAV-FYSVAPRPVE-VVDTLGAGD 226
Query: 297 AFVGGFL-SQLVQEKPVEDCVRTGC-YAANV 325
+F+ GFL S L + + +R G +AA
Sbjct: 227 SFIAGFLLSLLAGGTAIAEAMRQGAQFAAKT 257
|
Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown. Length = 264 |
| >gnl|CDD|236514 PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional | Back alignment and domain information |
|---|
Score = 55.7 bits (135), Expect = 8e-09
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 256 RITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQ 308
+ ++T GA+ V+V G+V+ FP P VDT GAGDAFV G L+ L Q
Sbjct: 214 ALLLVTLGAEGVLVHTRGQVQHFPA---PSVDPVDTTGAGDAFVAGLLAGLSQ 263
|
Length = 304 |
| >gnl|CDD|182090 PRK09813, PRK09813, fructoselysine 6-kinase; Provisional | Back alignment and domain information |
|---|
Score = 53.2 bits (128), Expect = 4e-08
Identities = 49/276 (17%), Positives = 100/276 (36%), Gaps = 48/276 (17%)
Query: 64 TQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVC 123
N++ VA + + I +G D +G ++K++ GV++ + + T V
Sbjct: 23 GGNAVNVAVYCTRYGIQPGCITWVGDDDYGTKLKQDLARMGVDISHVHTKHGVTAQTQVE 82
Query: 124 VVGGERSL---VANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAE 180
+ +R + A E ++A + + + +I AE
Sbjct: 83 LHDNDRVFGDYTEGVMADFALSEEDYA--------------WLAQYDIVHA--AIWGHAE 126
Query: 181 HAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEE- 239
A + + F ++ + +P++DY F + + E + +
Sbjct: 127 DAFPQLHAAGKLTAFDFSDKWDSPLWQTLVPHLDYAFASAPQ----------EDEFLRLK 176
Query: 240 IALKISQWPKASGTHKRITVITQGADPVVVAEDG----KVKLFPVILLPKEKLVDTNGAG 295
+ +++ + ++T G + +A DG + PV +VDT GAG
Sbjct: 177 MKAIVARGAG-------VVIVTLG-ENGSIAWDGAQFWRQAPEPV------TVVDTMGAG 222
Query: 296 DAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSG 331
D+F+ GFL + + + G A IQ G
Sbjct: 223 DSFIAGFLCGWLAGMTLPQAMAQGTACAAKTIQYHG 258
|
Length = 260 |
| >gnl|CDD|238918 cd01943, MAK32, MAK32 kinase | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 7e-08
Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 7/142 (4%)
Query: 196 PFICEFFR-EPQEKALPYMDYVFG-NETEARTFAKVHGWE--TDNVEEIALKISQWPKAS 251
P C+ E +ALP +D VF N EA + E +D +E L+ +
Sbjct: 163 PDSCDPENLEDLLQALPRVD-VFSPNLEEAARLLGLPTSEPSSDEEKEAVLQALLFSGIL 221
Query: 252 GTHKRITVITQGAD-PVVVAEDGKVKL-FPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE 309
V+ G V + D +L P K+VD G G++F+GGF + L
Sbjct: 222 QDPGGGVVLRCGKLGCYVGSADSGPELWLPAYHTKSTKVVDPTGGGNSFLGGFAAGLALT 281
Query: 310 KPVEDCVRTGCYAANVVIQRSG 331
K +++ G AA+ I++ G
Sbjct: 282 KSIDEACIYGSVAASFAIEQVG 303
|
MAK32 is a protein found primarily in fungi that is necessary for the structural stability of L-A particles. The L-A virus particule is a specialized compartment for the transcription and replication of double-stranded RNA, known to infect yeast and other fungi. MAK32 is part of the host machinery used by the virus to multiply. Length = 328 |
| >gnl|CDD|238920 cd01945, ribokinase_group_B, Ribokinase-like subgroup B | Back alignment and domain information |
|---|
Score = 49.6 bits (119), Expect = 6e-07
Identities = 56/276 (20%), Positives = 103/276 (37%), Gaps = 35/276 (12%)
Query: 59 IAGG-ATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYY-EDESAP 116
I GG A ++ VA+ Q IG +G D G + A GV+ + A
Sbjct: 34 IGGGNAANAAVAVARLGGQ----ARLIGVVGDDAIGRLILAELAAEGVDTSFIVVAPGAR 89
Query: 117 TGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQ 176
+ ++ + G+R+ ++ ++ +I+ A + G PE+
Sbjct: 90 SPISSITDITGDRATISI----TAIDTQAAPDSLPDAILGGADAVLVDG----RQPEAAL 141
Query: 177 MVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDN 236
+A+ A A+ ++L + E+ LP D+ +E R
Sbjct: 142 HLAQEARARGIPIPLDLDGGGL-----RVLEELLPLADHAICSENFLRPNTGS------- 189
Query: 237 VEEIALKISQWPKASGTHKRITVITQGADPVV-VAEDGKVKLFPVILLPKEKLVDTNGAG 295
++ AL++ +T G + + DG++ P ++VDT GAG
Sbjct: 190 ADDEALELLASLGI-----PFVAVTLGEAGCLWLERDGELFHVPA---FPVEVVDTTGAG 241
Query: 296 DAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSG 331
D F G F L + P+ + +R AA + + G
Sbjct: 242 DVFHGAFAHALAEGMPLREALRFASAAAALKCRGLG 277
|
Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. . Length = 284 |
| >gnl|CDD|238570 cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases | Back alignment and domain information |
|---|
Score = 49.5 bits (119), Expect = 7e-07
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 259 VITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRT 318
+++ GAD ++ V PK K+V T GAGD+ V GF++ L Q +E+ +R
Sbjct: 218 LVSLGADGALLVTKDGVYRASP---PKVKVVSTVGAGDSMVAGFVAGLAQGLSLEEALRL 274
Query: 319 G--CYAANV 325
+A
Sbjct: 275 AVAAGSATA 283
|
FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis. Length = 289 |
| >gnl|CDD|238922 cd01947, Guanosine_kinase_like, Guanosine kinase-like sugar kinases | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 9e-07
Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 256 RITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDC 315
R ++T+G ++ + V K+ D+ GAGD+F GF+ L++ +E+
Sbjct: 191 RYLIVTEGELGAILYP--GGRYNHVPAKKA-KVPDSTGAGDSFAAGFIYGLLKGWSIEEA 247
Query: 316 VRTGCYAANVVIQRSGCT 333
+ G + + G
Sbjct: 248 LELGAQCGAICVSHFGPY 265
|
Found in bacteria and archaea, the guanosine kinase-like group is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. Length = 265 |
| >gnl|CDD|224030 COG1105, FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 1e-06
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 259 VITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVR- 317
+++ GAD ++ V F PK ++V T GAGD+ V GFL+ L++ K +E+ +R
Sbjct: 219 IVSLGADGALLVTAEGV-YFASP--PKVQVVSTVGAGDSMVAGFLAGLLKGKSLEEALRF 275
Query: 318 -TGCYAANV 325
C AA
Sbjct: 276 AVACGAAAA 284
|
Length = 310 |
| >gnl|CDD|215434 PLN02813, PLN02813, pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 2e-06
Identities = 81/344 (23%), Positives = 135/344 (39%), Gaps = 44/344 (12%)
Query: 7 LLGMGNPLLDISAVVDEEFLKKYDIKLN--NAILAED--KHLPMYDELASKENVEYIAGG 62
+LG+G ++D S +VD+EFL++ ++ I E+ K L D + K + AGG
Sbjct: 72 VLGLGQAMVDFSGMVDDEFLERLGLEKGTRKVINHEERGKVLRALDGCSYKAS----AGG 127
Query: 63 ATQNSIKVAQWMLQIPGA------TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAP 116
+ N++ VA L A + G +G D G+ + A V+ +
Sbjct: 128 SLSNTL-VALARLGSQSAAGPALNVAMAGSVGSDPLGDFYRTKLRRANVHFLSQPVKDGT 186
Query: 117 TGTCAVCVV-GGERSLVA--NLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFF--LTVS 171
TGT V +R++++ S+ Y + S + K++ + G+ L +
Sbjct: 187 TGTVIVLTTPDAQRTMLSYQGTSSTVNYD------SCLASAISKSRVLVVEGYLWELPQT 240
Query: 172 PESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP-YMDYVFGNETEARTFAKVH 230
E+I E A + + S E R+ + Y D +F N EAR
Sbjct: 241 IEAIAQACEEAHRAGALVAVTASDVSCIERHRDDFWDVMGNYADILFANSDEARALC--G 298
Query: 231 GWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVD 290
++ E +S + + +T GA + G+ P VD
Sbjct: 299 LGSEESPESATRYLSHFCP-------LVSVTDGARGSYIGVKGEAVYIPP---SPCVPVD 348
Query: 291 TNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANV---VIQRSG 331
T GAGDA+ G L L+ + V D G AA V V+ + G
Sbjct: 349 TCGAGDAYAAGILYGLL--RGVSDLRGMGELAARVAATVVGQQG 390
|
Length = 426 |
| >gnl|CDD|234133 TIGR03168, 1-PFK, hexose kinase, 1-phosphofructokinase family | Back alignment and domain information |
|---|
Score = 48.3 bits (116), Expect = 2e-06
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 259 VITQGAD-PVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVR 317
+++ GAD ++V ++G +K P PK ++V+T GAGD+ V GFL+ L + +E+ +R
Sbjct: 217 LVSLGADGALLVTKEGALKATP----PKVEVVNTVGAGDSMVAGFLAGLARGLSLEEALR 272
Query: 318 TG--CYAANVVIQRSGCTYP 335
+A +G P
Sbjct: 273 FAVAAGSAAAFSPGTGLPDP 292
|
This family consists largely of 1-phosphofructokinases, but also includes tagatose-6-kinases and 6-phosphofructokinases. Length = 303 |
| >gnl|CDD|215183 PLN02323, PLN02323, probable fructokinase | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 1e-05
Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 9/56 (16%)
Query: 273 GKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPV---EDCVRTGCYAANV 325
G+V+ F V K VDT GAGDAFVGG LSQL ++ + E+ +R AN
Sbjct: 251 GRVEGFKV------KAVDTTGAGDAFVGGLLSQLAKDLSLLEDEERLREALRFANA 300
|
Length = 330 |
| >gnl|CDD|238912 cd01937, ribokinase_group_D, Ribokinase-like subgroup D | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 3e-05
Identities = 48/288 (16%), Positives = 77/288 (26%), Gaps = 64/288 (22%)
Query: 59 IAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFG-----------EEMKKNSTAAGVNV 107
I G T + I + PG + + + G + K S +
Sbjct: 4 IIGHVTIDEIVTNGSGVVKPGGPATYASLTLSRLGLTVKLVTKVGRDYPDKWSDLFDNGI 63
Query: 108 KYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFF 167
+ S T T + R+ A +E P E +
Sbjct: 64 EVISLLSTETTTFELNYTNEGRTRTLLAKCAAIPDTE---SPLSTITAEI---VILGPVP 117
Query: 168 LTVSPESIQMVAEHAAAKNKVFMMNLSAPFICE----FFREP------QEKALPYMDYVF 217
+SP + A FI F R + L D +
Sbjct: 118 EEISPSLFRKFA-----------------FISLDAQGFLRRANQEKLIKCVILKLHDVLK 160
Query: 218 GNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKL 277
+ EA E+A I + ++T G + + +
Sbjct: 161 LSRVEAE--------VISTPTELARLIKETGVK------EIIVTDGEEGGYIFDGNGKYT 206
Query: 278 FPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANV 325
P K+ +VD GAGD F+ FL + K D +AA
Sbjct: 207 IP---ASKKDVVDPTGAGDVFLAAFLYSRLSGK---DIKEAAEFAAAA 248
|
Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. Length = 254 |
| >gnl|CDD|238577 cd01172, RfaE_like, RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose | Back alignment and domain information |
|---|
Score = 43.3 bits (103), Expect = 9e-05
Identities = 53/272 (19%), Positives = 94/272 (34%), Gaps = 45/272 (16%)
Query: 84 IGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLV-------ANLS 136
+G +G D+ G+ ++K G++ DE PT T V+ + L+ + LS
Sbjct: 59 LGVVGDDEAGDLLRKLLEKEGIDTDGIVDEGRPT-TTKTRVIARNQQLLRVDREDDSPLS 117
Query: 137 AANCYKSEHLKRPEIWS-IVEKAKYY-------YIAGFFLTVSPESIQMVAEHAAAKNKV 188
A + I E+ Y G +P I+ + A
Sbjct: 118 AEE--------EQRLIERIAERLPEADVVILSDYGKGVL---TPRVIEALIAAARELGIP 166
Query: 189 FMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWP 248
+++ ++ + NE EAR + D +E K+ +
Sbjct: 167 VLVDPKGRDYSKYRG---------ATLLTPNEKEAREALGDEINDDDELEAAGEKLLE-- 215
Query: 249 KASGTHKRITVITQGADPV-VVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLV 307
+ ++T G + + + DG+V+ P L KE + D GAGD + L
Sbjct: 216 ---LLNLEALLVTLGEEGMTLFERDGEVQHIPA--LAKE-VYDVTGAGDTVIATLALALA 269
Query: 308 QEKPVEDCVRTGCYAANVVIQRSGCTYPPKPE 339
+E+ AA VV+ + G E
Sbjct: 270 AGADLEEAAFLANAAAGVVVGKVGTAPVTPKE 301
|
LPS plays an important role in maintaining the structural integrity of the bacterial outer membrane of gram-negative bacteria. RfaE consists of two domains, a sugar kinase domain, represented here, and a domain belonging to the cytidylyltransferase superfamily. Length = 304 |
| >gnl|CDD|234367 TIGR03828, pfkB, 1-phosphofructokinase | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 259 VITQGADPVV-VAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVR 317
+I+ GAD + V ++G + P PK ++V T GAGD+ V GFL+ L +E+ +R
Sbjct: 217 LISLGADGALLVTKEGALFAQP----PKGEVVSTVGAGDSMVAGFLAGLESGLSLEEALR 272
Query: 318 TG 319
Sbjct: 273 LA 274
|
This enzyme acts in concert with the fructose-specific phosphotransferase system (PTS) which imports fructose as fructose-1-phosphate. The action of 1-phosphofructokinase results in beta-D-fructose-1,6-bisphosphate and is an entry point into glycolysis (GenProp0688). Length = 304 |
| >gnl|CDD|238914 cd01939, Ketohexokinase, Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 5e-04
Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 16/129 (12%)
Query: 200 EFFREPQE--KALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKA-SGTHKR 256
E + +E + Y D VF ++ +A+ G++ + EE + P+A
Sbjct: 165 EVEKPREELLELAAYCDVVF----VSKDWAQSRGYK--SPEE--CLRGEGPRAKKAALLV 216
Query: 257 ITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQL-VQEKPVEDC 315
T QGA + DG+ ++VDT GAGD F + L + +
Sbjct: 217 CTWGDQGAG--ALGPDGEY--VHSPAHKPIRVVDTLGAGDTFNAAVIYALNKGPDDLSEA 272
Query: 316 VRTGCYAAN 324
+ G A+
Sbjct: 273 LDFGNRVAS 281
|
KHK can also phosphorylate several other furanose sugars. It is found in higher eukaryotes where it is believed to function as a dimer and requires K(+) and ATP to be active. In humans, hepatic KHK deficiency causes fructosuria, a benign inborn error of metabolism. Length = 290 |
| >gnl|CDD|236514 PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.001
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 60 AGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPTG 118
GGA N VA + ++ G + +IG +G D FG M++ GV+ Y D + T
Sbjct: 27 PGGAPAN---VAVGIARLGGESGFIGRVGDDPFGRFMQQTLQDEGVDTTYLRLDPAHRTS 83
Query: 119 TCAVCVVG----GERS 130
T VV GERS
Sbjct: 84 T---VVVDLDDQGERS 96
|
Length = 304 |
| >gnl|CDD|178237 PLN02630, PLN02630, pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.001
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 289 VDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCY 321
VD GAGD+F+GGF++ LVQ V D G Y
Sbjct: 234 VDPTGAGDSFLGGFVAGLVQGLAVPDAALLGNY 266
|
Length = 335 |
| >gnl|CDD|238921 cd01946, ribokinase_group_C, Ribokinase-like subgroup C | Back alignment and domain information |
|---|
Score = 38.6 bits (90), Expect = 0.003
Identities = 35/123 (28%), Positives = 47/123 (38%), Gaps = 19/123 (15%)
Query: 191 MNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQW-PK 249
MN F E +K L +D V N+ EAR N+ + A I PK
Sbjct: 146 MN----FWISIKPEKLKKVLAKVDVVIINDGEARQLT-----GAANLVKAARLILAMGPK 196
Query: 250 ASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE 309
A +I +G ++ D P P E + D GAGD F GGF+ L +
Sbjct: 197 A-------LIIKRGEYGALLFTDDGYFAAPA--YPLESVFDPTGAGDTFAGGFIGYLASQ 247
Query: 310 KPV 312
K
Sbjct: 248 KDT 250
|
Found only in bacteria, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. Length = 277 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 341 | |||
| PTZ00247 | 345 | adenosine kinase; Provisional | 100.0 | |
| PLN02548 | 332 | adenosine kinase | 100.0 | |
| KOG2854 | 343 | consensus Possible pfkB family carbohydrate kinase | 100.0 | |
| PLN02813 | 426 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| PRK15074 | 434 | inosine/guanosine kinase; Provisional | 100.0 | |
| PLN02379 | 367 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| cd01168 | 312 | adenosine_kinase Adenosine kinase (AK) catalyzes t | 100.0 | |
| PRK11142 | 306 | ribokinase; Provisional | 100.0 | |
| PTZ00292 | 326 | ribokinase; Provisional | 100.0 | |
| cd01174 | 292 | ribokinase Ribokinase catalyses the phosphorylatio | 100.0 | |
| PLN02341 | 470 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| cd01944 | 289 | YegV_kinase_like YegV-like sugar kinase. Found onl | 100.0 | |
| PRK09850 | 313 | pseudouridine kinase; Provisional | 100.0 | |
| cd01945 | 284 | ribokinase_group_B Ribokinase-like subgroup B. Fou | 100.0 | |
| PLN02967 | 581 | kinase | 100.0 | |
| PLN02323 | 330 | probable fructokinase | 100.0 | |
| TIGR02152 | 293 | D_ribokin_bact ribokinase. This model describes ri | 100.0 | |
| cd01942 | 279 | ribokinase_group_A Ribokinase-like subgroup A. Fou | 100.0 | |
| COG0524 | 311 | RbsK Sugar kinases, ribokinase family [Carbohydrat | 100.0 | |
| PRK09434 | 304 | aminoimidazole riboside kinase; Provisional | 100.0 | |
| PF00294 | 301 | PfkB: pfkB family carbohydrate kinase; InterPro: I | 100.0 | |
| cd01166 | 294 | KdgK 2-keto-3-deoxygluconate kinase (KdgK) phospho | 100.0 | |
| PRK09954 | 362 | putative kinase; Provisional | 100.0 | |
| cd01167 | 295 | bac_FRK Fructokinases (FRKs) mainly from bacteria | 100.0 | |
| cd01947 | 265 | Guanosine_kinase_like Guanosine kinase-like sugar | 100.0 | |
| cd01172 | 304 | RfaE_like RfaE encodes a bifunctional ADP-heptose | 100.0 | |
| cd01939 | 290 | Ketohexokinase Ketohexokinase (fructokinase, KHK) | 100.0 | |
| TIGR03828 | 304 | pfkB 1-phosphofructokinase. This enzyme acts in co | 100.0 | |
| cd01940 | 264 | Fructoselysine_kinase_like Fructoselysine kinase-l | 100.0 | |
| TIGR02198 | 315 | rfaE_dom_I rfaE bifunctional protein, domain I. Rf | 100.0 | |
| PLN02543 | 496 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| cd01943 | 328 | MAK32 MAK32 kinase. MAK32 is a protein found prima | 100.0 | |
| KOG2855 | 330 | consensus Ribokinase [Carbohydrate transport and m | 100.0 | |
| PRK09513 | 312 | fruK 1-phosphofructokinase; Provisional | 100.0 | |
| cd01941 | 288 | YeiC_kinase_like YeiC-like sugar kinase. Found in | 100.0 | |
| PRK10294 | 309 | 6-phosphofructokinase 2; Provisional | 100.0 | |
| PRK13508 | 309 | tagatose-6-phosphate kinase; Provisional | 100.0 | |
| cd01164 | 289 | FruK_PfkB_like 1-phosphofructokinase (FruK), minor | 100.0 | |
| TIGR03168 | 303 | 1-PFK hexose kinase, 1-phosphofructokinase family. | 100.0 | |
| PRK09813 | 260 | fructoselysine 6-kinase; Provisional | 100.0 | |
| COG1105 | 310 | FruK Fructose-1-phosphate kinase and related fruct | 100.0 | |
| TIGR01231 | 309 | lacC tagatose-6-phosphate kinase. This enzyme is p | 100.0 | |
| PRK11316 | 473 | bifunctional heptose 7-phosphate kinase/heptose 1- | 100.0 | |
| cd01946 | 277 | ribokinase_group_C Ribokinase-like subgroup C. Fou | 100.0 | |
| PLN02630 | 335 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| cd01937 | 254 | ribokinase_group_D Ribokinase-like subgroup D. Fou | 100.0 | |
| KOG2947 | 308 | consensus Carbohydrate kinase [Carbohydrate transp | 100.0 | |
| COG2870 | 467 | RfaE ADP-heptose synthase, bifunctional sugar kina | 100.0 | |
| cd00287 | 196 | ribokinase_pfkB_like ribokinase/pfkB superfamily: | 99.96 | |
| cd01173 | 254 | pyridoxal_pyridoxamine_kinase Pyridoxal kinase pla | 99.81 | |
| PRK12412 | 268 | pyridoxal kinase; Reviewed | 99.79 | |
| TIGR00097 | 254 | HMP-P_kinase phosphomethylpyrimidine kinase. This | 99.79 | |
| TIGR00687 | 286 | pyridox_kin pyridoxal kinase. ThiD and related pro | 99.79 | |
| PRK05756 | 286 | pyridoxamine kinase; Validated | 99.78 | |
| PRK12413 | 253 | phosphomethylpyrimidine kinase; Provisional | 99.77 | |
| PRK06427 | 266 | bifunctional hydroxy-methylpyrimidine kinase/ hydr | 99.77 | |
| cd01169 | 242 | HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrim | 99.76 | |
| PRK07105 | 284 | pyridoxamine kinase; Validated | 99.75 | |
| PRK08176 | 281 | pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpy | 99.74 | |
| PRK08573 | 448 | phosphomethylpyrimidine kinase; Provisional | 99.73 | |
| PRK12616 | 270 | pyridoxal kinase; Reviewed | 99.71 | |
| PTZ00344 | 296 | pyridoxal kinase; Provisional | 99.62 | |
| KOG3009 | 614 | consensus Predicted carbohydrate kinase, contains | 99.59 | |
| PLN02898 | 502 | HMP-P kinase/thiamin-monophosphate pyrophosphoryla | 99.57 | |
| cd01171 | 254 | YXKO-related B.subtilis YXKO protein of unknown fu | 99.57 | |
| PTZ00347 | 504 | phosphomethylpyrimidine kinase; Provisional | 99.56 | |
| PF08543 | 246 | Phos_pyr_kin: Phosphomethylpyrimidine kinase; Inte | 99.5 | |
| COG0351 | 263 | ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidi | 99.5 | |
| PRK09517 | 755 | multifunctional thiamine-phosphate pyrophosphoryla | 99.48 | |
| cd01170 | 242 | THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (T | 99.48 | |
| PRK14713 | 530 | multifunctional hydroxymethylpyrimidine phosphokin | 99.45 | |
| PLN02978 | 308 | pyridoxal kinase | 99.44 | |
| TIGR00196 | 272 | yjeF_cterm yjeF C-terminal region, hydroxyethylthi | 99.41 | |
| COG2240 | 281 | PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coe | 99.27 | |
| PTZ00493 | 321 | phosphomethylpyrimidine kinase; Provisional | 99.13 | |
| PRK09355 | 263 | hydroxyethylthiazole kinase; Validated | 99.08 | |
| TIGR00694 | 249 | thiM hydroxyethylthiazole kinase. This model repre | 98.96 | |
| KOG2599 | 308 | consensus Pyridoxal/pyridoxine/pyridoxamine kinase | 98.55 | |
| PRK03979 | 463 | ADP-specific phosphofructokinase; Provisional | 98.47 | |
| PRK14039 | 453 | ADP-dependent glucokinase; Provisional | 98.39 | |
| KOG2598 | 523 | consensus Phosphomethylpyrimidine kinase [Coenzyme | 98.39 | |
| TIGR02045 | 446 | P_fruct_ADP ADP-specific phosphofructokinase. Phos | 98.32 | |
| PF04587 | 444 | ADP_PFK_GK: ADP-specific Phosphofructokinase/Gluco | 98.06 | |
| PRK14038 | 453 | ADP-dependent glucokinase; Provisional | 98.03 | |
| PF01256 | 242 | Carb_kinase: Carbohydrate kinase; InterPro: IPR000 | 97.96 | |
| PF02110 | 246 | HK: Hydroxyethylthiazole kinase family; InterPro: | 97.95 | |
| PRK10565 | 508 | putative carbohydrate kinase; Provisional | 97.93 | |
| COG2145 | 265 | ThiM Hydroxyethylthiazole kinase, sugar kinase fam | 97.75 | |
| KOG3974 | 306 | consensus Predicted sugar kinase [Carbohydrate tra | 97.58 | |
| cd01938 | 445 | ADPGK_ADPPFK ADP-dependent glucokinase (ADPGK) and | 96.72 | |
| COG0063 | 284 | Predicted sugar kinase [Carbohydrate transport and | 95.68 | |
| COG4809 | 466 | Archaeal ADP-dependent phosphofructokinase/glucoki | 93.75 | |
| KOG4184 | 478 | consensus Predicted sugar kinase [Carbohydrate tra | 92.93 | |
| PRK10076 | 213 | pyruvate formate lyase II activase; Provisional | 91.22 |
| >PTZ00247 adenosine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-52 Score=384.76 Aligned_cols=338 Identities=52% Similarity=0.895 Sum_probs=288.7
Q ss_pred CcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCC-ce
Q 019402 3 YEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPG-AT 81 (341)
Q Consensus 3 ~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~-~v 81 (341)
..++|+++|++++|++..++++|+.++.+.+|+.++.+..++|.++++....+....+||++.|+|+++++|..+|. ++
T Consensus 4 ~~~~i~~iG~~~~D~~~~v~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~la~lg~~g~~~v 83 (345)
T PTZ00247 4 APKKLLGFGNPLLDISAHVSDEFLEKYGLELGSAILAEEKQLPIFEELESIPNVSYVPGGSALNTARVAQWMLQAPKGFV 83 (345)
T ss_pred CCceEEEECCceEEEEEeeCHHHHHHcCCCCCceeechHHHHHHHHHHHhccCceecCCCHHHHHHHHHHHHhcCCCCcE
Confidence 35699999999999999999999999999999999999889999999999999999999999999999998533455 99
Q ss_pred EEEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCCchhHhhhhcceEE
Q 019402 82 SYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYY 161 (341)
Q Consensus 82 ~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 161 (341)
.++|.||+|.+|+++++.|++.||++++++..+.+|+.+++.+++|+|+++.+++++..++++++......+.+++++++
T Consensus 84 ~~ig~vG~D~~G~~i~~~l~~~GVd~~~~~~~~~~Tg~~~i~v~~~~r~~~~~~ga~~~l~~~~i~~~~~~~~l~~~~~v 163 (345)
T PTZ00247 84 CYVGCVGDDRFAEILKEAAEKDGVEMLFEYTTKAPTGTCAVLVCGKERSLVANLGAANHLSAEHMQSHAVQEAIKTAQLY 163 (345)
T ss_pred EEEEEeccchhHHHHHHHHHHcCCeeeccccCCCCcEEEEEEEcCCCcccccCcchhhcCChHHcCcHHHHHHHhhCCEE
Confidence 99999999999999999999999999887656778999999887789988888888888888887752223468899999
Q ss_pred EEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHH
Q 019402 162 YIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIA 241 (341)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~ 241 (341)
|++++.+..+.+.+..+++.++++++++++|++.+.+.....+.+.++++++|++++|++|++.|++....+.++.++++
T Consensus 164 ~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~~~Dil~~N~~Ea~~l~g~~~~~~~~~~~~~ 243 (345)
T PTZ00247 164 YLEGFFLTVSPNNVLQVAKHARESGKLFCLNLSAPFISQFFFERLLQVLPYVDILFGNEEEAKTFAKAMKWDTEDLKEIA 243 (345)
T ss_pred EEEEEEecccHHHHHHHHHHHHHcCCEEEEECCcHHHHHHHHHHHHHHHhhCCEEEeCHHHHHHHhhccCCCccCHHHHH
Confidence 99998666678999999999999999999998766543333455788999999999999999999874333345677888
Q ss_pred HHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHH
Q 019402 242 LKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCY 321 (341)
Q Consensus 242 ~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~ 321 (341)
+.+.++......+.+.||||+|++|+++++++..++++++++++.++||||||||+|+|||+++|++|+++++|+++|++
T Consensus 244 ~~l~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~~~vVDTtGAGDaF~agfl~~l~~g~~~~~al~~a~~ 323 (345)
T PTZ00247 244 ARIAMLPKYSGTRPRLVVFTQGPEPTLIATKDGVTSVPVPPLDQEKIVDTNGAGDAFVGGFLAQYANGKDIDRCVEAGHY 323 (345)
T ss_pred HHHHhccccccCCCCEEEEecCCCceEEEECCEEEEEeccccCCCCccCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 88754321012357899999999999999999888888877643468999999999999999999999999999999999
Q ss_pred HHhhhhhhccccCCCCCCC
Q 019402 322 AANVVIQRSGCTYPPKPEF 340 (341)
Q Consensus 322 ~aa~~v~~~g~~~p~~~e~ 340 (341)
+|+++|++.|+.+|..+.+
T Consensus 324 aAa~~v~~~Ga~~~~~~~~ 342 (345)
T PTZ00247 324 SAQVIIQHNGCTYPEKPPF 342 (345)
T ss_pred HHHHHHhccCCCCCCCCCC
Confidence 9999999999988776643
|
|
| >PLN02548 adenosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-52 Score=378.98 Aligned_cols=331 Identities=85% Similarity=1.314 Sum_probs=283.1
Q ss_pred ecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEEeecC
Q 019402 10 MGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGK 89 (341)
Q Consensus 10 iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~~vG~ 89 (341)
+|++.+|++...+++|+++|+|.+|...+.+.+++|.+++.+...+....+||++.|++.+++++..+|.++.++|.+|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~Nva~~a~~l~~lg~~~~~ig~vG~ 80 (332)
T PLN02548 1 MGNPLLDISAVVDQDFLDKYDVKLNNAILAEEKHLPMYDELASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYMGCIGK 80 (332)
T ss_pred CCCceeEEEEecCHHHHHHcCCCCCceeechHHHHHHHHHHhccCCceecCCcHHHHHHHHHHHHhcCCCcEEEEEEEcC
Confidence 69999999999999999999999999999999999999999999999999999999998877765566899999999999
Q ss_pred CchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCCchhHhhhhcceEEEEeccccc
Q 019402 90 DKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLT 169 (341)
Q Consensus 90 D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~ 169 (341)
|.+|+++++.|+++||+++++...+.+|+.+++.+++|+|.++.+.++...++.+.+...+.++.+..+|++|++++.+.
T Consensus 81 D~~g~~i~~~L~~~gVd~~~~~~~~~~T~~~~i~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~ 160 (332)
T PLN02548 81 DKFGEEMKKCATAAGVNVHYYEDESTPTGTCAVLVVGGERSLVANLSAANCYKVEHLKKPENWALVEKAKFYYIAGFFLT 160 (332)
T ss_pred ChhHHHHHHHHHHcCCceeeeccCCCCCceEEEEEecCCceeeeccchhhcCCHHHhcChhhHhHHhhCCEEEEEEEEcc
Confidence 99999999999999999999865677899988888788888877766666666665553223456789999999998776
Q ss_pred cCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCC
Q 019402 170 VSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPK 249 (341)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~ 249 (341)
.+++.+..+++.+++++.++++|++.+.|.....+.+.++++++|++++|++|+..+++....+.++.+++++.+.++.+
T Consensus 161 ~~~~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~l~~~~~ 240 (332)
T PLN02548 161 VSPESIMLVAEHAAANNKTFMMNLSAPFICEFFKDQLMEALPYVDFLFGNETEARTFAKVQGWETEDVEEIALKISALPK 240 (332)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEECCChhHHHHhHHHHHHHHhhCCEEEecHHHHHHHhCccCCCcccHHHHHHHHHHhhh
Confidence 78888999999999999999999987776544556688899999999999999999987654444566666666643211
Q ss_pred CCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHHHHhhhhhh
Q 019402 250 ASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQR 329 (341)
Q Consensus 250 ~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~ 329 (341)
..+.+++.+|||+|++|++++.+++.+++|++++++++++|||||||+|+|||++++++|+++++|+++|+++|+++|++
T Consensus 241 ~~g~~~~~vvvT~G~~G~~~~~~~~~~~~pa~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~l~eal~~a~aaAa~~v~~ 320 (332)
T PLN02548 241 ASGTHKRTVVITQGADPTVVAEDGKVKEFPVIPLPKEKLVDTNGAGDAFVGGFLSQLVQGKDIEECVRAGNYAANVIIQR 320 (332)
T ss_pred hccccCCEEEEEeCCCcEEEEECCeEEEeccccCCcCccccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhc
Confidence 01235789999999999999988888888876555668999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCC
Q 019402 330 SGCTYPPKPEF 340 (341)
Q Consensus 330 ~g~~~p~~~e~ 340 (341)
.|+..|.+|.+
T Consensus 321 ~G~~~~~~~~~ 331 (332)
T PLN02548 321 SGCTYPEKPDF 331 (332)
T ss_pred cCCCCCCCccC
Confidence 99999988875
|
|
| >KOG2854 consensus Possible pfkB family carbohydrate kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-51 Score=353.06 Aligned_cols=336 Identities=63% Similarity=1.090 Sum_probs=315.0
Q ss_pred ceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEE
Q 019402 5 GILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li 84 (341)
...+.+|++++|+...+|.+||++|+|..|+.+++++++++..++.......+..+||++.|.+++++++++....+.++
T Consensus 7 ~il~G~gnpLLD~~a~Vd~~~L~KygL~~n~ail~d~~~~~~~~E~~~~~~~~~~AGGs~qNt~R~aq~~~~~p~~~~f~ 86 (343)
T KOG2854|consen 7 GILVGLGNPLLDISAVVDDEFLDKYGLKLNDAILADDKHLGLFDELMEGFNVKYSAGGSAQNTLRIAQWLLQQPGATVFF 86 (343)
T ss_pred ceeeccCccceeeeeccCHHHHHHcCCCCCcceecchhhHHHHHHHhhcccEEecCCchhHHHHHHHHHHccCCCceEEE
Confidence 35667899999999999999999999999999999999999999999999999999999999999999987754599999
Q ss_pred EeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCCchhHhhhhcceEEEEe
Q 019402 85 GCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIA 164 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~ 164 (341)
|.+|.|.+|+.+++.+++.|++..+.+.++.+|+.|.+++++.+|++..+.++...++.++++.++.|..++++.++|+.
T Consensus 87 GsvG~Dk~ge~l~~~~~~aGv~~~yq~~~d~~TGtCavli~~~nRSL~anLgAAn~f~~dhl~~~~~~~lveka~v~yv~ 166 (343)
T KOG2854|consen 87 GSVGKDKFGELLKSKARAAGVNVHYQVKEDGPTGTCAVLITGDNRSLCANLGAANCFKVDHLDKEENWALVEKAKVFYVA 166 (343)
T ss_pred eeccCchHHHHHHHHHHhcCceEEEEeccCCCCceEEEEEeCCCcchhhccchhhccCHHHhcchhhhhhhhheeEEEEE
Confidence 99999999999999999999999999889999999999998777999999999999999999888889999999999999
Q ss_pred ccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHHHH
Q 019402 165 GFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKI 244 (341)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l 244 (341)
|+.+..+|+.+..+.+.+.+.+.++.++++.+.+.....+.+.+.++|+|+++.|++|++.+++..++...+..+.+...
T Consensus 167 Gffltv~p~ai~~v~qh~~e~~r~~~lnlsapfI~q~~~~~l~~v~~y~DiifgNe~EA~af~~~~~~~t~dv~eia~~~ 246 (343)
T KOG2854|consen 167 GFFLTVSPDAIRKVAQHAAENNRVFTLNLSAPFISQFFKDALDKVLPYADIIFGNEDEAAAFARAHGWETKDVKEIALKL 246 (343)
T ss_pred EEEEEeChHHHHHHHHHHHHhcchhheeccchhHHHHHHHHHHhhcCcceEEEcCHHHHHHHHHhhCCcccchHHHhhHh
Confidence 99999999999999999999999999999999998888899999999999999999999999999888888888888888
Q ss_pred hcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 019402 245 SQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAAN 324 (341)
Q Consensus 245 ~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa 324 (341)
....+......++++||.|.+++....+++....|..+.+..+++||+||||+|++||+++|.+|.++++|++.+..+|+
T Consensus 247 ~~~~k~~~~~~r~vvit~g~~~~i~~~~~~v~~~~v~~~~~~~ivDtnGAGDaFvgGFl~~l~qg~~l~~cir~g~~aa~ 326 (343)
T KOG2854|consen 247 SALPKVNGTRPRTVVITQGPDPVIVAEDGKVTAYPVLPLPVEEIVDTNGAGDAFVGGFLSQLVQGKSLEECIRAGSYAAS 326 (343)
T ss_pred hccccccccccceEEEccCCCceEEecCCceEEeccccccceeeeeCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHhh
Confidence 77776455678899999999999999888888877777777799999999999999999999999999999999999999
Q ss_pred hhhhhccccCCCCCCC
Q 019402 325 VVIQRSGCTYPPKPEF 340 (341)
Q Consensus 325 ~~v~~~g~~~p~~~e~ 340 (341)
.+++..|+.+|..++|
T Consensus 327 ~vi~~~G~~~p~~~~~ 342 (343)
T KOG2854|consen 327 HVIRRVGCTVPEKPDF 342 (343)
T ss_pred heeeccCCCCCCCCCC
Confidence 9999999999999886
|
|
| >PLN02813 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-48 Score=361.81 Aligned_cols=312 Identities=20% Similarity=0.280 Sum_probs=264.2
Q ss_pred cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCC-----
Q 019402 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIP----- 78 (341)
Q Consensus 4 ~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg----- 78 (341)
+.+|+++|++++|++..++.+|+++++++++...+.+.+..-...+.....+....+||++.|+|+++++ ||
T Consensus 69 ~~~vl~iG~~~vDi~~~v~~~fl~~~~lp~~~~~~i~~~~~~~l~e~~~~~~~~~~~GG~~~N~Avalar---LG~~~~~ 145 (426)
T PLN02813 69 RWDVLGLGQAMVDFSGMVDDEFLERLGLEKGTRKVINHEERGKVLRALDGCSYKASAGGSLSNTLVALAR---LGSQSAA 145 (426)
T ss_pred cceEEEeCCceeEEEEecCHHHHHHcCCCcCcccccCHHHHHHHHHHhhccCceEecCcHHHHHHHHHHH---hcccccc
Confidence 5689999999999999999999999999999988887766666667777888899999999999999998 45
Q ss_pred ---CceEEEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhh
Q 019402 79 ---GATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSI 154 (341)
Q Consensus 79 ---~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (341)
.+|.++|.||+|.+|+++++.|++.||++.++...+.+|+.++++++ +|+|+++.+.+++..++++++. .+.
T Consensus 146 ~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~~~~~~~~Tg~~~ilv~~~gertii~~~Ga~~~l~~~~~~----~~~ 221 (426)
T PLN02813 146 GPALNVAMAGSVGSDPLGDFYRTKLRRANVHFLSQPVKDGTTGTVIVLTTPDAQRTMLSYQGTSSTVNYDSCL----ASA 221 (426)
T ss_pred CCCCcEEEEEEeCCChHHHHHHHHHHHcCCcccceecCCCCceEEEEEEcCCCCceeeeccCchhhCCccccC----HHH
Confidence 69999999999999999999999999999988766678999988887 7999998888877777665543 366
Q ss_pred hhcceEEEEeccccccC--HHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhH-HHHhhCCCCcEEEcCHHHHHHHHhhcC
Q 019402 155 VEKAKYYYIAGFFLTVS--PESIQMVAEHAAAKNKVFMMNLSAPFICEFFRE-PQEKALPYMDYVFGNETEARTFAKVHG 231 (341)
Q Consensus 155 ~~~~~~v~i~~~~~~~~--~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~-~~~~~l~~~dil~~n~~E~~~l~~~~~ 231 (341)
+++++++|++++.+..+ .+.+..+++.+++.|+++++|+++......+++ ....+++++|++++|++|+..+++..
T Consensus 222 i~~adiv~l~g~~~~~~~~~~~~~~~~~~ak~~g~~v~~d~s~~~~~~~~~~~l~~~ll~~vDil~~Ne~Ea~~l~g~~- 300 (426)
T PLN02813 222 ISKSRVLVVEGYLWELPQTIEAIAQACEEAHRAGALVAVTASDVSCIERHRDDFWDVMGNYADILFANSDEARALCGLG- 300 (426)
T ss_pred HhcCCEEEEEeeecCCCchHHHHHHHHHHHHHcCCEEEEECCCcchhhhhHHHHHHHHHhcCCEEEeCHHHHHHHhCCC-
Confidence 89999999998764433 377889999999999999999876432222222 23445689999999999999998642
Q ss_pred CCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCC-
Q 019402 232 WETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEK- 310 (341)
Q Consensus 232 ~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~- 310 (341)
+.++.+++++.+ . .+++.||||+|++|++++++++.+++|++++ ++||||||||+|+|||+|++++|+
T Consensus 301 -~~~~~~~a~~~L------~-~~~~~VVVT~G~~Ga~~~~~~~~~~~pa~~v---~vVDTtGAGDAF~Agfl~~l~~G~~ 369 (426)
T PLN02813 301 -SEESPESATRYL------S-HFCPLVSVTDGARGSYIGVKGEAVYIPPSPC---VPVDTCGAGDAYAAGILYGLLRGVS 369 (426)
T ss_pred -CCCCHHHHHHHH------H-cCCCEEEEEeCCCCeEEEECCEEEEeCCCCC---CcccCCChHHHHHHHHHHHHHcCCC
Confidence 124567777776 2 3578999999999999999998888887755 899999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhhhhhccccC
Q 019402 311 PVEDCVRTGCYAANVVIQRSGCTY 334 (341)
Q Consensus 311 ~~~~a~~~A~~~aa~~v~~~g~~~ 334 (341)
++++|+++|+++|+.+|++.|++.
T Consensus 370 ~l~~al~~A~a~Aa~~v~~~Ga~~ 393 (426)
T PLN02813 370 DLRGMGELAARVAATVVGQQGTRL 393 (426)
T ss_pred CHHHHHHHHHHHHHHHHcccCCCc
Confidence 999999999999999999999953
|
|
| >PRK15074 inosine/guanosine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-48 Score=357.09 Aligned_cols=315 Identities=19% Similarity=0.303 Sum_probs=257.6
Q ss_pred CcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCc-ccchHHHHhccCC-ceeecCchhHHHHHHHHHHhCCCCc
Q 019402 3 YEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDK-HLPMYDELASKEN-VEYIAGGATQNSIKVAQWMLQIPGA 80 (341)
Q Consensus 3 ~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~-~~~~~GG~~~n~a~~l~~l~~lg~~ 80 (341)
...+|+++|++.+|+...++++||++|++.+|.+.+.+.+ +.+...+...... ....+||++.|+|+++++ |+ |.+
T Consensus 32 ~~~~v~g~GNaLvDi~~~v~d~fL~~~~l~kg~m~li~~e~~~~l~~~l~~~~~~~~~~~GGsaaNtA~~lAr-LG-G~~ 109 (434)
T PRK15074 32 SRTYIVGIDQTLVDIEAKVDDEFLERYGLSKGHSLVIEDDVAEALYQELKQNNLITHEFAGGTIGNTLHNYSV-LA-DDR 109 (434)
T ss_pred CCCcEEEeCCceeeEEEeeCHHHHHHcCCCCCceEecCHHHHHHHHHHHhhccccccccCCCHHHHHHHHHHH-cC-CCC
Confidence 3568999999999999999999999999999999999885 4444444433222 466799999999999998 32 489
Q ss_pred eEEEEeecCC-chhHHHHHHHH--hcCCceeEeecCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhh
Q 019402 81 TSYIGCIGKD-KFGEEMKKNST--AAGVNVKYYEDESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVE 156 (341)
Q Consensus 81 v~li~~vG~D-~~g~~i~~~l~--~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (341)
+.++|.||+| .+|+++++.|+ +.||+++++...+.+|+.++++++ +|+|+++.+.+++..+++++++. ..++
T Consensus 110 ~~fig~VGdDd~~G~~~~~~L~~~~~GVdt~~v~~~~~~TG~~~VlV~~dGeRt~~t~~GA~~~Lt~edld~----~~i~ 185 (434)
T PRK15074 110 SVLLGVMSSNIEIGSYAYRYLCNTSSRTDLNYLQGVDGPIGRCFTLISEDGERTFAISPGHMNQLRPESIPE----DVIA 185 (434)
T ss_pred eEEEEEeCCCHHHHHHHHHHhhhhhCCccCcceEEcCCCCEEEEEEECCCCCEEEEEecChhhcCChhHCCH----hHhc
Confidence 9999999999 79999999997 689999998644567999999997 89999999999888999988874 5789
Q ss_pred cceEEEEeccccc-----cCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHH-HHhhCCCCcEEEcCHHHHHHHHhhc
Q 019402 157 KAKYYYIAGFFLT-----VSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREP-QEKALPYMDYVFGNETEARTFAKVH 230 (341)
Q Consensus 157 ~~~~v~i~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~-~~~~l~~~dil~~n~~E~~~l~~~~ 230 (341)
+++++|++++.+. ..++.+..+++.+++.|+++++|++........++. ...+++++|++++|++|+..|++
T Consensus 186 ~a~ilyl~Gy~l~~~~~~~~~~a~~~al~~Ake~G~~VslD~s~~~~v~~~~~~~~e~l~~~vDILf~NeeEa~~LtG-- 263 (434)
T PRK15074 186 GASALVLTAYLVRCKPGEPMPEATMKAIEYAKKHNVPVVLTLGTKFVIEDNPQWWQEFLKEHVSILAMNEDEAEALTG-- 263 (434)
T ss_pred cCCEEEEeeeehhcccCCCcHHHHHHHHHHHHHcCCEEEEECcchhhccccHHHHHHHHHhcCCEEEcCHHHHHHHhC--
Confidence 9999999998753 236788999999999999999999875432222222 23456799999999999999986
Q ss_pred CCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCC-------eEE---------------------------
Q 019402 231 GWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDG-------KVK--------------------------- 276 (341)
Q Consensus 231 ~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~-------~~~--------------------------- 276 (341)
.++++++++.+ .. +++.||||+|++|++++..+ ..+
T Consensus 264 ---~~d~eea~~~L------~~-~~~~VVVTlG~~Ga~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (434)
T PRK15074 264 ---ESDPLLASDKA------LD-WVDLVLCTAGPIGLYMAGYTEDEAKRETQHPLLPGAIAEFNRYEFSRAMRKKDCQNP 333 (434)
T ss_pred ---CCCHHHHHHHH------Hc-CCCEEEEEECCCCEEEEecccccccCceeeeccccccccccchhcccchhccccccc
Confidence 34677888887 32 36899999999999997522 222
Q ss_pred -----EEecccCCCCcccCCCCcchhhHHHHHHHHhcCC--------------------CHHHHHHHHHHHHhhhhhhcc
Q 019402 277 -----LFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEK--------------------PVEDCVRTGCYAANVVIQRSG 331 (341)
Q Consensus 277 -----~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~--------------------~~~~a~~~A~~~aa~~v~~~g 331 (341)
++|++...++++||||||||+|+|||+|+|++|+ ++++|+++|+++|+.+|++.|
T Consensus 334 ~~~~~~~~~~~~~~~~~vDttGAGD~f~~gfl~~l~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~vi~~~G 413 (434)
T PRK15074 334 LRVYSHIAPYMGGPEKIMNTNGAGDGALSALLHDITANSYHRSNVPNSSKHKRTYLTYSSLAQVCKYANRVSYEVLNQHS 413 (434)
T ss_pred cccccccCcccCCCCcceeCCCcHHHHHHHHHHHHHCCCcccccccccccccccccccCCHHHHHHHHHHHHHHHHhhcC
Confidence 6666522245899999999999999999999998 899999999999999999999
Q ss_pred ccCC
Q 019402 332 CTYP 335 (341)
Q Consensus 332 ~~~p 335 (341)
++++
T Consensus 414 ~~~~ 417 (434)
T PRK15074 414 PRLS 417 (434)
T ss_pred CCCC
Confidence 9644
|
|
| >PLN02379 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-47 Score=351.67 Aligned_cols=313 Identities=23% Similarity=0.322 Sum_probs=261.2
Q ss_pred cceEEEec-CceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhc---------cCCceeecCchhHHHHHHHHH
Q 019402 4 EGILLGMG-NPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELAS---------KENVEYIAGGATQNSIKVAQW 73 (341)
Q Consensus 4 ~~~i~~iG-~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~---------~~~~~~~~GG~~~n~a~~l~~ 73 (341)
+++|+.|| ++.+|+...++++||+++++.+|.+.+.+.++.-....... ....+.++||++.|++.++++
T Consensus 19 ~~~v~g~g~nalvD~~~~v~~~~l~~~~~~kg~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a~~la~ 98 (367)
T PLN02379 19 PPLVLGLQPVALVDHVARVDWSLLDQIPGDRGGSIRVTIEELEHILREVNAHILPSPDDLSPIKTMAGGSVANTIRGLSA 98 (367)
T ss_pred CCcEEEEccccEEEEEEecCHHHHHHcCCCCcceeecCHHHHHHHHHHhhhcccccccccccceecCCCHHHHHHHHHHH
Confidence 56899999 99999999999999999999999988888766544443332 224778899999999999985
Q ss_pred HhCCCCceEEEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhH
Q 019402 74 MLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIW 152 (341)
Q Consensus 74 l~~lg~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (341)
.+ |.++.++|.||+|.+|+++++.|++.||++.+++..+.+|+.++++++ +|+|++..+.++...++++++..
T Consensus 99 ~L--G~~~~~ig~VG~D~~G~~~~~~L~~~GI~~~~~~~~~~~Tg~~~v~v~~dgert~~~~lg~~~~l~~~~~~~---- 172 (367)
T PLN02379 99 GF--GVSTGIIGACGDDEQGKLFVSNMGFSGVDLSRLRAKKGPTAQCVCLVDALGNRTMRPCLSSAVKLQADELTK---- 172 (367)
T ss_pred hc--CCCEEEEEEeCCChhHHHHHHHHHHcCCCccCcccCCCCCceEEEEECCCCCccccCCccccccCChhHCCH----
Confidence 34 599999999999999999999999999999887655668999998887 79998876667666777766653
Q ss_pred hhhhcceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCC--CCcEEEcCHHHHHHHHhhc
Q 019402 153 SIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP--YMDYVFGNETEARTFAKVH 230 (341)
Q Consensus 153 ~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~--~~dil~~n~~E~~~l~~~~ 230 (341)
+.+++++++|++ +.. .+++.+.++++.++++|+++++|++.+.....+++.+.++++ ++|++++|++|+..+++..
T Consensus 173 ~~~~~~~~v~v~-~~~-~~~~~~~~~~~~A~~~g~~v~lD~s~~~~v~~~r~~l~~ll~~~~vDilf~Ne~Ea~~l~~~~ 250 (367)
T PLN02379 173 EDFKGSKWLVLR-YGF-YNLEVIEAAIRLAKQEGLSVSLDLASFEMVRNFRSPLLQLLESGKIDLCFANEDEARELLRGE 250 (367)
T ss_pred HHHhcCCEEEEE-ccc-CCHHHHHHHHHHHHHcCCEEEEeccchhhhhhhhHHHHHHhhcCCccEEEcCHHHHHHHhcCC
Confidence 568899999999 432 567899999999999999999999876544445566777774 8999999999999998632
Q ss_pred CCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCC
Q 019402 231 GWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEK 310 (341)
Q Consensus 231 ~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~ 310 (341)
. .++.+++.+.+ ..+++.++||+|++|++++.+++.++++++++ +++||||||||+|+|||+|++++|+
T Consensus 251 ~--~~~~~~~~~~l-------~~~~~~vvvT~G~~Ga~~~~~~~~~~v~a~~~--~~vVDTtGAGDaFaagfl~gl~~G~ 319 (367)
T PLN02379 251 Q--ESDPEAALEFL-------AKYCNWAVVTLGSKGCIARHGKEVVRVPAIGE--TNAVDATGAGDLFASGFLYGLIKGL 319 (367)
T ss_pred C--CCCHHHHHHHH-------HhcCCEEEEEECCCCeEEEECCEEEEecCCCC--CCcccCCChhHHHHHHHHHHHHCCC
Confidence 2 23456666555 33578999999999999999888888887643 3789999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhhhhhccccCC
Q 019402 311 PVEDCVRTGCYAANVVIQRSGCTYP 335 (341)
Q Consensus 311 ~~~~a~~~A~~~aa~~v~~~g~~~p 335 (341)
++++|+++|+++|+.+|++.|++.+
T Consensus 320 ~l~~a~~~g~~aAa~vi~~~G~~~~ 344 (367)
T PLN02379 320 SLEECCKVGACSGGSVVRALGGEVT 344 (367)
T ss_pred CHHHHHHHHHHHHHHHHhccCCCCC
Confidence 9999999999999999999999754
|
|
| >cd01168 adenosine_kinase Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-47 Score=341.43 Aligned_cols=310 Identities=48% Similarity=0.737 Sum_probs=255.9
Q ss_pred ceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEE
Q 019402 5 GILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li 84 (341)
.+|+++|++++|++..+++..+..+++.+|+.++......- ......+....+||++.|+|.+|++ + |.++.++
T Consensus 2 ~~v~~vG~~~~D~~~~v~~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~GG~~~N~A~~la~-L--G~~~~~i 75 (312)
T cd01168 2 YDVLGLGNALVDILAQVDDAFLEKLGLKKGDMILADMEEQE---ELLAKLPVKYIAGGSAANTIRGAAA-L--GGSAAFI 75 (312)
T ss_pred ceEEEECCCeEEEEEecCHHHHHHcCCCCCceeecCHHHHH---HHHHhcCccccCCCHHHHHHHHHHH-h--cCCeEEE
Confidence 47999999999999999865555555555554444211110 0111125678999999999999998 4 4999999
Q ss_pred EeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcceEEEE
Q 019402 85 GCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYI 163 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i 163 (341)
|.+|+|.+|+.+++.|+++||++++++..+.+|+.++++++ +|+|+++.+++++..++++++.. +.++++|++|+
T Consensus 76 ~~vG~D~~g~~i~~~l~~~GV~~~~~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~----~~l~~~~~v~~ 151 (312)
T cd01168 76 GRVGDDKLGDFLLKDLRAAGVDTRYQVQPDGPTGTCAVLVTPDAERTMCTYLGAANELSPDDLDW----SLLAKAKYLYL 151 (312)
T ss_pred EEeccChhHHHHHHHHHHCCCccccccCCCCCceEEEEEEcCCCceeeecccchhhcCChhHCCH----HHHccCCEEEE
Confidence 99999999999999999999999988655678999999887 68999888888878888877753 56889999999
Q ss_pred eccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHHH
Q 019402 164 AGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALK 243 (341)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~ 243 (341)
+++.+..+++.+..+++.+++.|.++++|+..+.+....++.+.++++++|++++|++|++.+++. +.++..++++.
T Consensus 152 ~~~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~~~d~l~~n~~E~~~l~~~---~~~~~~~~a~~ 228 (312)
T cd01168 152 EGYLLTVPPEAILLAAEHAKENGVKIALNLSAPFIVQRFKEALLELLPYVDILFGNEEEAEALAEA---ETTDDLEAALK 228 (312)
T ss_pred EEEecCCCHHHHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHHHHHHHhhCCEEEeCHHHHHHHhCC---CCCChHHHHHH
Confidence 997665666899999999999999999999765443344455788999999999999999999863 12456778888
Q ss_pred HhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHHHH
Q 019402 244 ISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAA 323 (341)
Q Consensus 244 l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~a 323 (341)
+ ...+++.+|||+|++|++++++++.+++|++++ ++++|||||||+|+|||++++++|+++++|+++|+++|
T Consensus 229 l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~--~~vvDttGAGDaf~ag~l~~l~~g~~~~~a~~~a~~~A 300 (312)
T cd01168 229 L------LALRCRIVVITQGAKGAVVVEGGEVYPVPAIPV--EKIVDTNGAGDAFAGGFLYGLVQGEPLEECIRLGSYAA 300 (312)
T ss_pred H------HhcCCCEEEEecCCCCeEEEECCEEEeCCCCCC--CCcccCCchHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 8 566889999999999999998888888887651 38999999999999999999999999999999999999
Q ss_pred hhhhhhccccCC
Q 019402 324 NVVIQRSGCTYP 335 (341)
Q Consensus 324 a~~v~~~g~~~p 335 (341)
+++|++.|+..|
T Consensus 301 a~~v~~~G~~~~ 312 (312)
T cd01168 301 AEVIQQLGPRLP 312 (312)
T ss_pred HHHHhccCCCCC
Confidence 999999998653
|
The physiological function of AK is associated with the regulation of extracellular adenosine levels and the preservation of intracellular adenylate pools. Adenosine kinase is involved in the purine salvage pathway. |
| >PRK11142 ribokinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-47 Score=343.78 Aligned_cols=293 Identities=23% Similarity=0.337 Sum_probs=246.8
Q ss_pred ceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEE
Q 019402 5 GILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li 84 (341)
++|+++|++++|++..++ ++|.++..+...+....+||.+.|+|.+|++ + |.++.++
T Consensus 3 ~~i~~iG~~~~D~~~~~~--------------------~~p~~~~~~~~~~~~~~~GG~~~Nva~~la~-l--G~~~~~~ 59 (306)
T PRK11142 3 GKLVVLGSINADHVLNLE--------------------SFPRPGETLTGRHYQVAFGGKGANQAVAAAR-L--GADIAFI 59 (306)
T ss_pred CcEEEECCceeeEEEEeC--------------------CCCCCCCeeEeccceecCCCcHHHHHHHHHh-c--CCcEEEE
Confidence 479999999999999987 5778888888888899999999999999998 4 5999999
Q ss_pred EeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcceEEE
Q 019402 85 GCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYY 162 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 162 (341)
|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++..+ +|+|+++.+.++...++++.++. ..+.+.+++++|
T Consensus 60 ~~vG~D~~g~~i~~~L~~~gV~~~~i~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~v~ 137 (306)
T PRK11142 60 ACVGDDSIGESMRQQLAKDGIDTAPVSVIKGESTGVALIFVNDEGENSIGIHAGANAALTPALVEA--HRELIANADALL 137 (306)
T ss_pred EEECCChhHHHHHHHHHHcCCChhhEEEcCCCCCCEEEEEECCCCCEEEEEeCCccccCCHHHHHH--HHhhhccCCEEE
Confidence 999999999999999999999999985 56677999988887 68888877777666777665542 235678999999
Q ss_pred EeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHH
Q 019402 163 IAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIAL 242 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~ 242 (341)
+++ ..+.+.+..+++.+++.|.++++|+.... .....+++++|++++|++|++.+++....+.++..++++
T Consensus 138 ~~~---~~~~~~~~~~~~~a~~~g~~v~~d~~~~~------~~~~~~~~~~dil~~n~~Ea~~l~g~~~~~~~~~~~~~~ 208 (306)
T PRK11142 138 MQL---ETPLETVLAAAKIAKQHGTKVILNPAPAR------ELPDELLALVDIITPNETEAEKLTGIRVEDDDDAAKAAQ 208 (306)
T ss_pred EeC---CCCHHHHHHHHHHHHHcCCEEEEECCCCc------ccCHHHHhhCCEEcCCHHHHHHHhCCCCCChHHHHHHHH
Confidence 975 34567888999999999999999986421 123467889999999999999998754433445566777
Q ss_pred HHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHHH
Q 019402 243 KISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYA 322 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~ 322 (341)
.+ ...+++.+|||+|++|++++++++.+++|++++ +++|||||||+|+|||++++++|+++++|+++|+++
T Consensus 209 ~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDt~GAGDaF~Agfi~~l~~g~~~~~al~~a~~~ 279 (306)
T PRK11142 209 VL------HQKGIETVLITLGSRGVWLSENGEGQRVPGFRV---QAVDTIAAGDTFNGALVTALLEGKPLPEAIRFAHAA 279 (306)
T ss_pred HH------HHhCCCeEEEEECCCcEEEEeCCcceeccCCCc---ccccCCCchhHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 77 456789999999999999998888888887655 899999999999999999999999999999999999
Q ss_pred Hhhhhhhcccc--CCCCCCC
Q 019402 323 ANVVIQRSGCT--YPPKPEF 340 (341)
Q Consensus 323 aa~~v~~~g~~--~p~~~e~ 340 (341)
|+.+|++.|+. +|+.+++
T Consensus 280 Aa~~~~~~G~~~~~~~~~~~ 299 (306)
T PRK11142 280 AAIAVTRKGAQPSIPWREEI 299 (306)
T ss_pred HHHHcCCCcccccCCCHHHH
Confidence 99999999995 5766553
|
|
| >PTZ00292 ribokinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-46 Score=339.73 Aligned_cols=299 Identities=22% Similarity=0.286 Sum_probs=247.9
Q ss_pred cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEE
Q 019402 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~l 83 (341)
+++|+|+|.+++|++..++ ++|.+++..........+||.++|+|.+|++ + |.++.+
T Consensus 15 ~~~vlviG~~~vD~~~~~~--------------------~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~-l--G~~~~~ 71 (326)
T PTZ00292 15 EPDVVVVGSSNTDLIGYVD--------------------RMPQVGETLHGTSFHKGFGGKGANQAVMASK-L--GAKVAM 71 (326)
T ss_pred CCCEEEEccceeeEEEecC--------------------CCCCCCCceeecCceeCCCCcHHHHHHHHHH-c--CCCeEE
Confidence 5689999999999999988 5777777778888899999999999999998 4 599999
Q ss_pred EEeecCCchhHHHHHHHHhcCCceeEe-ecCCCCcceEEEEEe--CCeeceeecccccccCCcccCCCchhHhhhhc-ce
Q 019402 84 IGCIGKDKFGEEMKKNSTAAGVNVKYY-EDESAPTGTCAVCVV--GGERSLVANLSAANCYKSEHLKRPEIWSIVEK-AK 159 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~-~~~~~~t~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 159 (341)
+|.+|+|.+|+.+++.|++.||+++++ +..+.+|+.+++.++ +|+|+++.+++++..++++.+.. .+..+.. ++
T Consensus 72 is~vG~D~~g~~i~~~l~~~GI~~~~~~~~~~~~t~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~--~~~~i~~~~~ 149 (326)
T PTZ00292 72 VGMVGTDGFGSDTIKNFKRNGVNTSFVSRTENSSTGLAMIFVDTKTGNNEIVIIPGANNALTPQMVDA--QTDNIQNICK 149 (326)
T ss_pred EEEECCChhHHHHHHHHHHcCCChhhEEEcCCCCCcEEEEEEeCCCCceEEEEeCCccccCCHHHHHH--HHHHhhhhCC
Confidence 999999999999999999999999998 566778999998886 47888877777766777665542 2344667 89
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHH
Q 019402 160 YYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEE 239 (341)
Q Consensus 160 ~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~ 239 (341)
++++++ ..+.+...++++.+++.|+++++|++... .....+.+.++++++|++++|++|++.+++....+.++..+
T Consensus 150 ~~~~~~---~~~~~~~~~~~~~a~~~g~~v~~D~~~~~-~~~~~~~~~~~l~~~dii~~n~~E~~~l~g~~~~~~~~~~~ 225 (326)
T PTZ00292 150 YLICQN---EIPLETTLDALKEAKERGCYTVFNPAPAP-KLAEVEIIKPFLKYVSLFCVNEVEAALITGMEVTDTESAFK 225 (326)
T ss_pred EEEECC---CCCHHHHHHHHHHHHHcCCEEEEECCCCc-cccccccHHHHHhcCCEEcCCHHHHHHHhCCCCCChhHHHH
Confidence 999875 45667888899999999999999996432 11122457788999999999999999998754333344556
Q ss_pred HHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCe-EEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHH
Q 019402 240 IALKISQWPKASGTHKRITVITQGADPVVVAEDGK-VKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRT 318 (341)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~-~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~ 318 (341)
+++.+ ...+++.||+|+|++|+++++++. .+++|++++ +++|||||||+|+|||++++++|+++++|+++
T Consensus 226 ~~~~l------~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~---~vvDttGAGDaF~ag~l~~l~~g~~~~~al~~ 296 (326)
T PTZ00292 226 ASKEL------QQLGVENVIITLGANGCLIVEKENEPVHVPGKRV---KAVDTTGAGDCFVGSMAYFMSRGKDLKESCKR 296 (326)
T ss_pred HHHHH------HHcCCCeEEEEeCCCcEEEEeCCCceEEccCCcc---ccCCCcchHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 67777 456788999999999999987664 477887654 89999999999999999999999999999999
Q ss_pred HHHHHhhhhhhcccc--CCCCCCC
Q 019402 319 GCYAANVVIQRSGCT--YPPKPEF 340 (341)
Q Consensus 319 A~~~aa~~v~~~g~~--~p~~~e~ 340 (341)
|+++|++++++.|+. +|+.+|+
T Consensus 297 a~a~Aa~~v~~~G~~~~~~~~~~~ 320 (326)
T PTZ00292 297 ANRIAAISVTRHGTQSSYPHPSEL 320 (326)
T ss_pred HHHHHHHHcCCCCccccCCCHHHH
Confidence 999999999999995 5766554
|
|
| >cd01174 ribokinase Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-46 Score=332.08 Aligned_cols=285 Identities=25% Similarity=0.368 Sum_probs=243.2
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
+|+++|.+++|++..++ ++|.+++.....+...++||.+.|+|.+|++ + |.++.++|
T Consensus 1 ~il~iG~~~~D~~~~~~--------------------~~~~~~~~~~~~~~~~~~GG~~~NvA~~l~~-l--G~~~~~~~ 57 (292)
T cd01174 1 KVVVVGSINVDLVTRVD--------------------RLPKPGETVLGSSFETGPGGKGANQAVAAAR-L--GARVAMIG 57 (292)
T ss_pred CEEEEeeceeEEEEEec--------------------CCCCCCCcEEeccceecCCCcHHHHHHHHHH-c--CCceEEEE
Confidence 58999999999999887 5677777777888899999999999999998 4 59999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEe-ecCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcceEEEE
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYY-EDESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYI 163 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~-~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i 163 (341)
.+|+|.+|+.+++.|+++||+++++ +..+.+|+.+++.++ +|+|+++.+.++...++++.++. ..+.++.++++++
T Consensus 58 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~ 135 (292)
T cd01174 58 AVGDDAFGDELLENLREEGIDVSYVEVVVGAPTGTAVITVDESGENRIVVVPGANGELTPADVDA--ALELIAAADVLLL 135 (292)
T ss_pred EEcCCccHHHHHHHHHHcCCCceEEEEcCCCCceeEEEEEcCCCceEEEEeCCCCCCCCHHHHHH--HHHhcccCCEEEE
Confidence 9999999999999999999999998 566778999988887 58888877766665666554442 3456889999999
Q ss_pred eccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHHH
Q 019402 164 AGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALK 243 (341)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~ 243 (341)
++ ..+.+.+..+++.+++++.++++|+.... .....+++++|++++|++|++.+++....+.++.+++++.
T Consensus 136 ~~---~~~~~~~~~~~~~a~~~g~~v~~D~~~~~------~~~~~~~~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~ 206 (292)
T cd01174 136 QL---EIPLETVLAALRAARRAGVTVILNPAPAR------PLPAELLALVDILVPNETEAALLTGIEVTDEEDAEKAARL 206 (292)
T ss_pred eC---CCCHHHHHHHHHHHHhcCCEEEEeCCCcC------cCcHHHHhhCCEEeeCHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 86 45677889999999999999999997432 1235788899999999999999987654444456677788
Q ss_pred HhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHHHH
Q 019402 244 ISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAA 323 (341)
Q Consensus 244 l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~a 323 (341)
+ ...+++.+|+|+|++|+++++++..+++|++++ +++||+||||+|+|||++++++|+++++|+++|+++|
T Consensus 207 l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~---~~vdt~GaGD~F~ag~l~~l~~g~~~~~al~~a~~~A 277 (292)
T cd01174 207 L------LAKGVKNVIVTLGAKGALLASGGEVEHVPAFKV---KAVDTTGAGDTFIGALAAALARGLSLEEAIRFANAAA 277 (292)
T ss_pred H------HHcCCCEEEEEeCCCceEEEeCCceEEecCCCc---ccCCCCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 7 566889999999999999998888888887654 8899999999999999999999999999999999999
Q ss_pred hhhhhhcccc
Q 019402 324 NVVIQRSGCT 333 (341)
Q Consensus 324 a~~v~~~g~~ 333 (341)
+.++++.|+.
T Consensus 278 a~~~~~~G~~ 287 (292)
T cd01174 278 ALSVTRPGAQ 287 (292)
T ss_pred HHHhcCcCCC
Confidence 9999999984
|
This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution. |
| >PLN02341 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-43 Score=334.24 Aligned_cols=300 Identities=18% Similarity=0.200 Sum_probs=236.5
Q ss_pred CcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhc-----------cCCceeecCchhHHHHHHH
Q 019402 3 YEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELAS-----------KENVEYIAGGATQNSIKVA 71 (341)
Q Consensus 3 ~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-----------~~~~~~~~GG~~~n~a~~l 71 (341)
+|.+|+++|++++|+++.++ ++|.+++... .......+|| ++|+|++|
T Consensus 71 ~~~~vl~lG~~~vD~i~~V~--------------------~lP~~~~~~~~~~~~~~~~~~~~~~~~~~GG-~~NvAvaL 129 (470)
T PLN02341 71 KEIDVATLGNLCVDIVLPVP--------------------ELPPPSREERKAYMEELAASPPDKKSWEAGG-NCNFAIAA 129 (470)
T ss_pred ccccEEEECCcceeEEEecC--------------------CCCCCCHHHHHHHHHhhcccccccceecCCh-HHHHHHHH
Confidence 35689999999999999998 5777665321 1344556788 78999999
Q ss_pred HHHhCCCCceEEEEeecCCchhHHHHHHHHhcCCceeEeec-C--------CCCcceEEEEEe-CCeeceeecccccccC
Q 019402 72 QWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYED-E--------SAPTGTCAVCVV-GGERSLVANLSAANCY 141 (341)
Q Consensus 72 ~~l~~lg~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~-~--------~~~t~~~~~~~~-~g~~~~~~~~~~~~~~ 141 (341)
++ | |.++.++|.+|+|.+|+++++.|++.||++.++.. . ..+|+.++++++ +|++.+..........
T Consensus 130 ar-L--G~~v~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~~~~~~~~~~T~~~~vlvd~~ger~~~~~~~~~~~~ 206 (470)
T PLN02341 130 AR-L--GLRCSTIGHVGDEIYGKFLLDVLAEEGISVVGLIEGTDAGDSSSASYETLLCWVLVDPLQRHGFCSRADFGPEP 206 (470)
T ss_pred HH-c--CCCeEEEEEecCcHHHHHHHHHHHHcCCeeeEEEecCccccccccCCCceeEEEEEcCCCCceeeecccccccc
Confidence 98 4 59999999999999999999999999999999853 3 246888888887 5776654332222222
Q ss_pred CcccCCC--chhHhhhhcceEEEEecccc-ccCHHHHHHHHHHHHhcCCeEEEeCCcHH---HH--hhhhHHHHhhCCCC
Q 019402 142 KSEHLKR--PEIWSIVEKAKYYYIAGFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPF---IC--EFFREPQEKALPYM 213 (341)
Q Consensus 142 ~~~~~~~--~~~~~~~~~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~---~~--~~~~~~~~~~l~~~ 213 (341)
..+.+.. .+..+.++++|++|++++.+ .++++.+..+++.+++.|.++++|+.... |. +..++.+.++++++
T Consensus 207 ~~~~~~~l~~~~~~~l~~adiv~lsg~~~~~~~~~~~~~~~~~Ak~~g~~V~~Dp~~~~~~~~~~~~~~~~~l~~~L~~~ 286 (470)
T PLN02341 207 AFSWISKLSAEAKMAIRQSKALFCNGYVFDELSPSAIASAVDYAIDVGTAVFFDPGPRGKSLLVGTPDERRALEHLLRMS 286 (470)
T ss_pred chhhhhcccHHHHhhhhcCCEEEEeceeCCcCCHHHHHHHHHHHHHcCCEEEEeCCCcccccccChHHHHHHHHHHHhhC
Confidence 2122111 22345688999999998763 56788899999999999999999996421 11 11234578899999
Q ss_pred cEEEcCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCCCCCCC--ccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCC
Q 019402 214 DYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTH--KRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDT 291 (341)
Q Consensus 214 dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdt 291 (341)
|++++|++|++.+++ .++.+++++.+ ...+ .+.||||+|++|++++++++.+++|++++ +++||
T Consensus 287 Dil~~Ne~Ea~~l~g-----~~~~~~a~~~l------~~~g~~~k~VVVTlG~~Ga~~~~~~~~~~vpa~~v---~vVDT 352 (470)
T PLN02341 287 DVLLLTSEEAEALTG-----IRNPILAGQEL------LRPGIRTKWVVVKMGSKGSILVTRSSVSCAPAFKV---NVVDT 352 (470)
T ss_pred CEEEecHHHHHHHhC-----CCCHHHHHHHH------HhcCCCCCEEEEeeCCCCeEEEECCeeEEeCCCCc---CCCCC
Confidence 999999999999986 35677888887 3334 57999999999999999988888887755 89999
Q ss_pred CCcchhhHHHHHHHHhcCCCHHHHHHHHHHHHhhhhhhccc--cCCCCCCC
Q 019402 292 NGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGC--TYPPKPEF 340 (341)
Q Consensus 292 tGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~g~--~~p~~~e~ 340 (341)
|||||+|+|||++++++|+++++|+++|+++|++++++.|+ .+|+.+|+
T Consensus 353 tGAGDaF~Agfl~gll~G~~l~eal~~A~a~aA~~v~~~Ga~~~~p~~~ev 403 (470)
T PLN02341 353 VGCGDSFAAAIALGYIHNLPLVNTLTLANAVGAATAMGCGAGRNVATLEKV 403 (470)
T ss_pred cCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCcCCCCCCCCHHHH
Confidence 99999999999999999999999999999999999999997 47766554
|
|
| >cd01944 YegV_kinase_like YegV-like sugar kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-43 Score=317.73 Aligned_cols=284 Identities=24% Similarity=0.323 Sum_probs=230.0
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
+|+++|++++|++..++ ++|.++...........+|| +.|+|.+|++ + |.++.++|
T Consensus 1 ~i~~iG~~~~D~i~~~~--------------------~~~~~~~~~~~~~~~~~~GG-~~Nva~~l~~-l--G~~~~~~~ 56 (289)
T cd01944 1 KVLVIGAAVVDIVLDVD--------------------KLPASGGDIEAKSKSYVIGG-GFNVMVAASR-L--GIPTVNAG 56 (289)
T ss_pred CeEEEcceeEEEEeecc--------------------cCCCCCCccccceeeeccCc-HHHHHHHHHH-c--CCCeEEEE
Confidence 58999999999999987 57888888888888999999 9999999998 4 59999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcceEEEEe
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIA 164 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~ 164 (341)
.+|+|.+|+++++.|++.||+++++...+.+|+.+++.++ +|+|+++.+.++...+++++++. ..+.+++++|++
T Consensus 57 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 132 (289)
T cd01944 57 PLGNGNWADQIRQAMRDEGIEILLPPRGGDDGGCLVALVEPDGERSFISISGAEQDWSTEWFAT----LTVAPYDYVYLS 132 (289)
T ss_pred EecCChHHHHHHHHHHHcCCccccccccCCCCeEEEEEEcCCCceEEEEeCCccCCCCHHHhcc----ccCCCCCEEEEe
Confidence 9999999999999999999999998666666777767776 68998877777666666666653 236789999999
Q ss_pred cccccc---CHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHH
Q 019402 165 GFFLTV---SPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIA 241 (341)
Q Consensus 165 ~~~~~~---~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~ 241 (341)
++.+.. ..+.+.++++.++ .+.++++|+....+ ....+.+.++++++|++++|++|++.+++.. ......++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~D~~~~~~-~~~~~~~~~~l~~~d~~~~n~~E~~~l~g~~---~~~~~~~~ 207 (289)
T cd01944 133 GYTLASENASKVILLEWLEALP-AGTTLVFDPGPRIS-DIPDTILQALMAKRPIWSCNREEAAIFAERG---DPAAEASA 207 (289)
T ss_pred CccccCcchhHHHHHHHHHhcc-CCCEEEEcCccccc-ccCHHHHHHHHhcCCEEccCHHHHHHHhCCC---CcchHHHH
Confidence 876422 2455666666644 56889999963321 1123557889999999999999999998742 12223445
Q ss_pred HHHhcCCCCCCCCccEEEEeeCCCCEEEEe-CCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHH
Q 019402 242 LKISQWPKASGTHKRITVITQGADPVVVAE-DGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGC 320 (341)
Q Consensus 242 ~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~-~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~ 320 (341)
+.+ ...+++.||||+|++|++++. ++..+++|++++ +++|||||||+|+|||++++++|+++++|+++|+
T Consensus 208 ~~~------~~~~~~~vvvt~G~~Ga~~~~~~~~~~~~~~~~~---~vvDt~GAGDaf~ag~l~~~~~g~~~~~a~~~a~ 278 (289)
T cd01944 208 LRI------YAKTAAPVVVRLGSNGAWIRLPDGNTHIIPGFKV---KAVDTIGAGDTHAGGMLAGLAKGMSLADAVLLAN 278 (289)
T ss_pred HHH------HhccCCeEEEEECCCcEEEEecCCCeEEecCCCC---CCccCCCchHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 566 456678899999999999988 556677776654 8899999999999999999999999999999999
Q ss_pred HHHhhhhhhcc
Q 019402 321 YAANVVIQRSG 331 (341)
Q Consensus 321 ~~aa~~v~~~g 331 (341)
++|+.++++.|
T Consensus 279 a~aa~~~~~~G 289 (289)
T cd01944 279 AAAAIVVTRSG 289 (289)
T ss_pred HHHHhhhccCC
Confidence 99999999876
|
Found only in bacteria, YegV-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. |
| >PRK09850 pseudouridine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-44 Score=322.56 Aligned_cols=295 Identities=17% Similarity=0.219 Sum_probs=230.4
Q ss_pred CCCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCc
Q 019402 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGA 80 (341)
Q Consensus 1 m~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~ 80 (341)
|..+++|+|+|.+++|++...+ . |.++...........+||++.|+|.++++ + |.+
T Consensus 1 ~~~~~~i~~iG~~~vD~~~~~~--------------------~-~~~~~~~~~~~~~~~~GG~~~NvA~~l~~-l--G~~ 56 (313)
T PRK09850 1 MREKDYVVIIGSANIDVAGYSH--------------------E-SLNYADSNPGKIKFTPGGVGRNIAQNLAL-L--GNK 56 (313)
T ss_pred CCCCCcEEEECcEEEeeeccCC--------------------C-cCcCCCCCceEEEEeCCcHHHHHHHHHHH-c--CCC
Confidence 6678899999999999998764 1 22222233455778899999999999998 4 599
Q ss_pred eEEEEeecCCchhHHHHHHHHhcCCceeEe-ecCCCCcceEEEEEe-CCeeceeec-ccccccCCcccCCCchhHhhhhc
Q 019402 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKYY-EDESAPTGTCAVCVV-GGERSLVAN-LSAANCYKSEHLKRPEIWSIVEK 157 (341)
Q Consensus 81 v~li~~vG~D~~g~~i~~~l~~~gi~~~~~-~~~~~~t~~~~~~~~-~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 157 (341)
+.++|.+|+|.+|+++++.|++.||+++++ +..+.+|+.++++++ +|++.+... .++...++++.+.. ..+.+++
T Consensus 57 ~~~ig~vG~D~~g~~i~~~l~~~gVd~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 134 (313)
T PRK09850 57 AWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENTSSYLSLLDNTGEMLVAINDMNISNAITAEYLAQ--HREFIQR 134 (313)
T ss_pred eEEEEEecCchhHHHHHHHHHHcCCCchheeecCCCCceEEEEEecCCCCEEEEecCchHhhhCCHHHHHH--HHHHHhc
Confidence 999999999999999999999999999987 456677999999887 578776543 23334444443321 2345788
Q ss_pred ceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCH
Q 019402 158 AKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNV 237 (341)
Q Consensus 158 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~ 237 (341)
++++++++ ..+.+.+..+++.+ .++++++|+... |. ...+.++++++|++++|++|+..+++....+.++.
T Consensus 135 ~~~v~~~~---~~~~~~~~~~~~~~--~g~~v~~D~~~~-~~---~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~ 205 (313)
T PRK09850 135 AKVIVADC---NISEEALAWILDNA--ANVPVFVDPVSA-WK---CVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDV 205 (313)
T ss_pred CCEEEEeC---CCCHHHHHHHHHhc--cCCCEEEEcCCH-HH---HHHHHhhhccceEEccCHHHHHHHhCCCCCCHHHH
Confidence 99999976 35666777776643 578999999753 21 13366788999999999999999987543334456
Q ss_pred HHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeC-CeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHH
Q 019402 238 EEIALKISQWPKASGTHKRITVITQGADPVVVAED-GKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCV 316 (341)
Q Consensus 238 ~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~-~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~ 316 (341)
+++++.+ ...+++.+|||+|++|++++.+ ++..++|++++ +++|||||||+|+|||+++|++|+++++|+
T Consensus 206 ~~~~~~l------~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~~~---~vvDttGAGDaF~agfi~~l~~g~~~~eal 276 (313)
T PRK09850 206 AKVAAWF------HQHGLNRLVLSMGGDGVYYSDISGESGWSAPIKT---NVINVTGAGDAMMAGLASCWVDGMPFAESV 276 (313)
T ss_pred HHHHHHH------HHcCCCEEEEEeCCceEEEEcCCCCeEecCCCCc---ccccCCCcHHHHHHHHHHHHHcCCCHHHHH
Confidence 7777777 4567889999999999999874 44556676544 899999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhccc--cCCCCCC
Q 019402 317 RTGCYAANVVIQRSGC--TYPPKPE 339 (341)
Q Consensus 317 ~~A~~~aa~~v~~~g~--~~p~~~e 339 (341)
++|+++|+.++++.+. ..|++++
T Consensus 277 ~~a~a~aa~~~~~~~~~~~~~~~~~ 301 (313)
T PRK09850 277 RFAQGCSSMALSCEYTNNPDLSIAN 301 (313)
T ss_pred HHHHHHHHHHhcCCCCCCcccCHHH
Confidence 9999999999999987 4555544
|
|
| >cd01945 ribokinase_group_B Ribokinase-like subgroup B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-43 Score=315.95 Aligned_cols=277 Identities=23% Similarity=0.330 Sum_probs=229.6
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
+|+++|++++|++..++ ++|..++..+.......+||.+.|+|.+|++ + |.++.++|
T Consensus 1 ~i~~iG~~~iD~~~~~~--------------------~~p~~~~~~~~~~~~~~~GG~~~NvA~~l~~-l--G~~~~~~~ 57 (284)
T cd01945 1 RVLGVGLAVLDLIYLVA--------------------SFPGGDGKIVATDYAVIGGGNAANAAVAVAR-L--GGQARLIG 57 (284)
T ss_pred CEEEECcceeEEEEEec--------------------cCCCCCCeEEEeEEEEecCCHHHHHHHHHHH-c--CCCeEEEE
Confidence 58999999999999987 5777777778888999999999999999998 4 49999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEeec-CCCCcceEEEEEeCCeeceeecccccccCCcccCCCchhHhhhhcceEEEEe
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYED-ESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIA 164 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~-~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~ 164 (341)
.+|+|++|+.+++.|++.||++.++.. .+.+|+.+++...+|+++.+.+.+....+..+++.. ..++++|++|++
T Consensus 58 ~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~i~ 133 (284)
T cd01945 58 VVGDDAIGRLILAELAAEGVDTSFIVVAPGARSPISSITDITGDRATISITAIDTQAAPDSLPD----AILGGADAVLVD 133 (284)
T ss_pred EecCchHHHHHHHHHHHcCCCccceeecCCCCCccEEEEccCCCceEEEecCCCCCCCcccCCH----HHhCcCCEEEEc
Confidence 999999999999999999999999864 455677776633467777766666666666666653 457999999998
Q ss_pred ccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHHHH
Q 019402 165 GFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKI 244 (341)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l 244 (341)
+. .++...++++.++++|.++.+|+.... ..+ +.++++++|++++|++|++.+++. .+. ++++.+
T Consensus 134 ~~----~~~~~~~~~~~~~~~g~~v~~~~~~~~----~~~-~~~~~~~~dil~~n~~e~~~l~~~-----~~~-~~~~~l 198 (284)
T cd01945 134 GR----QPEAALHLAQEARARGIPIPLDLDGGG----LRV-LEELLPLADHAICSENFLRPNTGS-----ADD-EALELL 198 (284)
T ss_pred CC----CHHHHHHHHHHHHHcCCCeeEeccCCc----ccc-hHHHhccCCEEEeChhHHhhhcCC-----CHH-HHHHHH
Confidence 74 346788899999999986555543222 122 677889999999999999988752 222 666666
Q ss_pred hcCCCCCCCCccEEEEeeCCCCEEEEe-CCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHHHH
Q 019402 245 SQWPKASGTHKRITVITQGADPVVVAE-DGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAA 323 (341)
Q Consensus 245 ~~~~~~~~~~~~~vvvt~G~~G~~~~~-~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~a 323 (341)
...+++.+|||+|++|+++++ +++.+++|++++ +++||+||||+|+|||+++|++|+++++|+++|+++|
T Consensus 199 ------~~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~---~vvDt~GAGDaf~ag~l~~l~~g~~~~~al~~a~~~A 269 (284)
T cd01945 199 ------ASLGIPFVAVTLGEAGCLWLERDGELFHVPAFPV---EVVDTTGAGDVFHGAFAHALAEGMPLREALRFASAAA 269 (284)
T ss_pred ------HhcCCcEEEEEECCCCeEEEcCCCCEEecCCCcc---ccccCCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 556789999999999999998 677888887654 8999999999999999999999999999999999999
Q ss_pred hhhhhhcccc
Q 019402 324 NVVIQRSGCT 333 (341)
Q Consensus 324 a~~v~~~g~~ 333 (341)
+.++++.|+.
T Consensus 270 a~~~~~~G~~ 279 (284)
T cd01945 270 ALKCRGLGGR 279 (284)
T ss_pred HHHHhccCCc
Confidence 9999999984
|
Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. . |
| >PLN02967 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-43 Score=330.27 Aligned_cols=312 Identities=15% Similarity=0.194 Sum_probs=234.2
Q ss_pred cceEEEecCceeeeEeecCHH-HHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceE
Q 019402 4 EGILLGMGNPLLDISAVVDEE-FLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATS 82 (341)
Q Consensus 4 ~~~i~~iG~~~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~ 82 (341)
.+.|+|||++.+|++...... -+..+. .+--..+..+++......+||.+.|+|.+|++ ||.++.
T Consensus 196 ~~~V~~iGe~l~D~~p~g~~~~~l~~~~-----------~~~~~~~~~s~~~~~~~~~GGa~aNVAvaLAR---LG~~v~ 261 (581)
T PLN02967 196 PPLVCCFGAAQHAFVPSGRPANRLLDYE-----------IHERMKDAFWAPEKFVRAPGGSAGGVAIALAS---LGGKVA 261 (581)
T ss_pred CCeEEEECchhheecccCccchhhhhcc-----------ccccccccccCccceeeecCcHHHHHHHHHHH---CCCCEE
Confidence 457999999999997642110 000000 00000111345577888999999999999998 459999
Q ss_pred EEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeecee-ecccccccCCcccCCCchhHhhhhcce
Q 019402 83 YIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLV-ANLSAANCYKSEHLKRPEIWSIVEKAK 159 (341)
Q Consensus 83 li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (341)
|+|.||+|.+|+++++.|++.||+++++. ..+.+|+.+++.++ +|+++++ ..++++..++++++.. ..+.+++
T Consensus 262 fIg~VGdD~~G~~ll~~L~~~GVDts~v~~~~~~~Tgla~V~vd~~Gerr~~~~~~gAd~~L~~~di~~----~~l~~A~ 337 (581)
T PLN02967 262 FMGKLGDDDYGQAMLYYLNVNKVQTRSVCIDGKRATAVSTMKIAKRGRLKTTCVKPCAEDSLSKSEINI----DVLKEAK 337 (581)
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCcccceEecCCCCCcEEEEEECCCCceEEEEecCChhhhCChhhcCH----hHhcCCC
Confidence 99999999999999999999999999985 56678999999987 6887764 4567777788777653 5688999
Q ss_pred EEEEecccc--ccCHHHHHHHHHHHHhcCCeEEEeCC--cHHHH--hhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCC
Q 019402 160 YYYIAGFFL--TVSPESIQMVAEHAAAKNKVFMMNLS--APFIC--EFFREPQEKALPYMDYVFGNETEARTFAKVHGWE 233 (341)
Q Consensus 160 ~v~i~~~~~--~~~~~~~~~~~~~~~~~~~~v~~d~~--~~~~~--~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~ 233 (341)
++|+++..+ ....+.+..+++.+++.|++++||+. .+.|. ....+.+.++++++||+++|++|+..+++.....
T Consensus 338 i~hfgg~~ll~e~~~~all~alk~Ak~~Gv~VsFDpNlR~~lw~~~e~~~e~i~elL~~aDILk~NeeEl~~LtG~~~~~ 417 (581)
T PLN02967 338 MFYFNTHSLLDPTMRSTTLRAIKISKKLGGVIFYDLNLPLPLWSSSEETKSFIQEAWNLADIIEVTKQELEFLCGIEPTE 417 (581)
T ss_pred EEEEeCchhcccchHHHHHHHHHHHHHCCCEEEEECCCCcccccchHHHHHHHHHHHHhCCEEEECHHHHHHHhCCCccc
Confidence 999998753 22347899999999999999989874 34453 2244568889999999999999999998632100
Q ss_pred CC------------CHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCe---EEEEecccCCCCcccCCCCcchhh
Q 019402 234 TD------------NVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGK---VKLFPVILLPKEKLVDTNGAGDAF 298 (341)
Q Consensus 234 ~~------------~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~---~~~v~~~~~~~~~vvdttGAGDaf 298 (341)
.. ...+.+..+ ...+++.||||+|++|++++.++. ...++++++ ++.+||||||||+|
T Consensus 418 e~~~~~~~~~~~~~~~~e~a~~l------~~~g~k~VVVTlG~~Ga~~~~~~~~~~v~~~~a~~V-~V~vVDTTGAGDAF 490 (581)
T PLN02967 418 EFDTKDNDKSKFVHYSPEVVAPL------WHENLKVLFVTNGTSKIHYYTKEHNGAVHGMEDAPI-TPFTSDMSASGDGI 490 (581)
T ss_pred cccccccchhccccchHHHHHHH------HhCCCCEEEEEECccceEEEECCCceeEeeccCCCC-CCCCCCCCchhHHH
Confidence 00 012334455 345789999999999999998754 233343444 22369999999999
Q ss_pred HHHHHHHHhcC-------CCHHHHHHHHHHHHhhhhhhccc--cCCCCCCC
Q 019402 299 VGGFLSQLVQE-------KPVEDCVRTGCYAANVVIQRSGC--TYPPKPEF 340 (341)
Q Consensus 299 ~a~~~~~l~~g-------~~~~~a~~~A~~~aa~~v~~~g~--~~p~~~e~ 340 (341)
+|||+++|+++ +++++|++||+++||+++++.|+ .+|+.+++
T Consensus 491 ~AGfL~~Ll~g~~~~~g~~~LeeaLrfAnAaAAL~vt~~GA~~glPt~~eV 541 (581)
T PLN02967 491 VAGLMRMLTVQPHLITDKGYLEKTIKYAIDCGVIDQWLLARTRGFPPKEDM 541 (581)
T ss_pred HHHHHHHHHhccCcccccccHHHHHHHHHHHHHHHhccCCCccCCCCHHHH
Confidence 99999999984 67999999999999999999999 57766553
|
|
| >PLN02323 probable fructokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-43 Score=317.71 Aligned_cols=295 Identities=22% Similarity=0.302 Sum_probs=233.3
Q ss_pred CCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCce
Q 019402 2 AYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGAT 81 (341)
Q Consensus 2 ~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v 81 (341)
+++++|+++|++++|++..++ +.|. .........+||++.|+|.+|++ + |.++
T Consensus 8 ~~~~~i~~iG~~~vD~~~~~~--------------------~~~~----~~~~~~~~~~GG~~~NvA~~la~-L--G~~~ 60 (330)
T PLN02323 8 AESSLVVCFGEMLIDFVPTVS--------------------GVSL----AEAPAFKKAPGGAPANVAVGISR-L--GGSS 60 (330)
T ss_pred CCCCcEEEechhhhhhccCCC--------------------CCCc----ccccceeecCCChHHHHHHHHHh-c--CCce
Confidence 356789999999999998665 2332 12455678999999999999998 4 5999
Q ss_pred EEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecc--cccccCCcccCCCchhHhhhhc
Q 019402 82 SYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKRPEIWSIVEK 157 (341)
Q Consensus 82 ~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 157 (341)
.++|.+|+|.+|+++++.|++.||+++++. ..+.+|+.+++..+ +|+|+++.+. +++..++++++.. +.++.
T Consensus 61 ~~i~~vG~D~~g~~i~~~L~~~GI~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~----~~~~~ 136 (330)
T PLN02323 61 AFIGKVGDDEFGHMLADILKKNGVNNEGVRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLRESELDL----DLIRK 136 (330)
T ss_pred eEEEEecCChhHHHHHHHHHHcCCCCcceEEcCCCCceEEEEEECCCCceeEEeecCCchhccCChHHCCh----HHHcc
Confidence 999999999999999999999999999985 56667888888876 6888876653 4444666666653 56788
Q ss_pred ceEEEEecccccc--CHHHHHHHHHHHHhcCCeEEEeCCc--HHHH--hhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcC
Q 019402 158 AKYYYIAGFFLTV--SPESIQMVAEHAAAKNKVFMMNLSA--PFIC--EFFREPQEKALPYMDYVFGNETEARTFAKVHG 231 (341)
Q Consensus 158 ~~~v~i~~~~~~~--~~~~~~~~~~~~~~~~~~v~~d~~~--~~~~--~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~ 231 (341)
++++++++..... ....+..+++.+++.|.++++|+.. ..|. ...++.+.++++++|++++|++|+..+++..
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~g~~- 215 (330)
T PLN02323 137 AKIFHYGSISLITEPCRSAHLAAMKIAKEAGALLSYDPNLRLPLWPSAEAAREGIMSIWDEADIIKVSDEEVEFLTGGD- 215 (330)
T ss_pred CCEEEEechhccCchHHHHHHHHHHHHHHcCCEEEEcCCCChhhccCHHHHHHHHHHHHHhCCEEEcCHHHHHHHhCCC-
Confidence 9999988765321 2255678899999999999999863 2221 1234557788899999999999999998642
Q ss_pred CCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCC
Q 019402 232 WETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKP 311 (341)
Q Consensus 232 ~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~ 311 (341)
..+..++. ++ +..+++.+|||+|++|++++.+++.+++|++++ +++|||||||+|+|||++++++|++
T Consensus 216 --~~~~~~~~-~~------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaf~Agfl~~l~~g~~ 283 (330)
T PLN02323 216 --DPDDDTVV-KL------WHPNLKLLLVTEGEEGCRYYTKDFKGRVEGFKV---KAVDTTGAGDAFVGGLLSQLAKDLS 283 (330)
T ss_pred --CccHHHHH-HH------HhcCCCEEEEecCCCceEEEeCCCceEeCCccC---CCCCCCCcHHHHHHHHHHHHHcCCc
Confidence 12223333 33 345788999999999999998887778887655 8899999999999999999999986
Q ss_pred -------HHHHHHHHHHHHhhhhhhccc--cCCCCCCC
Q 019402 312 -------VEDCVRTGCYAANVVIQRSGC--TYPPKPEF 340 (341)
Q Consensus 312 -------~~~a~~~A~~~aa~~v~~~g~--~~p~~~e~ 340 (341)
+++|+++|+++|+++|++.|+ .+|+.+|+
T Consensus 284 ~~~~~~~l~~al~~a~a~Aa~~v~~~g~~~~~~~~~~v 321 (330)
T PLN02323 284 LLEDEERLREALRFANACGAITTTERGAIPALPTKEAV 321 (330)
T ss_pred cccchHHHHHHHHHHHHHHHHHHhccCCccCCCCHHHH
Confidence 899999999999999999999 46766554
|
|
| >TIGR02152 D_ribokin_bact ribokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=311.10 Aligned_cols=288 Identities=25% Similarity=0.382 Sum_probs=243.4
Q ss_pred cCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEEeecCC
Q 019402 11 GNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKD 90 (341)
Q Consensus 11 G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~~vG~D 90 (341)
|.+++|++..++ ++|.+++.....+...++||.+.|+|.+|++ + |.++.++|.+|+|
T Consensus 1 G~~~~D~~~~~~--------------------~~p~~~~~~~~~~~~~~~GG~~~Nva~~l~~-l--g~~~~~~~~vG~D 57 (293)
T TIGR02152 1 GSINMDLVLRTD--------------------RLPKPGETVHGHSFQIGPGGKGANQAVAAAR-L--GAEVSMIGKVGDD 57 (293)
T ss_pred CCceEeEEEEeC--------------------CCCCCCCcEecCCceecCCCcHHHHHHHHHH-C--CCCEEEEEEecCC
Confidence 788999999887 6788888888999999999999999999998 4 5999999999999
Q ss_pred chhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcceEEEEecccc
Q 019402 91 KFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFL 168 (341)
Q Consensus 91 ~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~ 168 (341)
.+|+.+++.|++.||++++++ ..+.+|+.+++.++ +|+|+++.+.++...++++++.. ..+.+..+|++++++
T Consensus 58 ~~g~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--- 132 (293)
T TIGR02152 58 AFGDELLENLKSNGIDTEYVGTVKDTPTGTAFITVDDTGENRIVVVAGANAELTPEDIDA--AEALIAESDIVLLQL--- 132 (293)
T ss_pred ccHHHHHHHHHHcCCCeeEEEEcCCCCCceEEEEEcCCCCEEEEEECCcCCcCCHHHHHH--HHhhhccCCEEEEec---
Confidence 999999999999999999996 45567999988887 58888776666655666665542 335678999999875
Q ss_pred ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHHHHhcCC
Q 019402 169 TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWP 248 (341)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~ 248 (341)
+.+.+.+..+++.+++++.++++|+.... .....++++++|++++|++|++.+++....+.++.+++++.+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~v~~D~~~~~-----~~~~~~~~~~~d~l~~n~~E~~~l~~~~~~~~~~~~~~~~~l---- 203 (293)
T TIGR02152 133 EIPLETVLEAAKIAKKHGVKVILNPAPAI-----KDLDDELLSLVDIITPNETEAEILTGIEVTDEEDAEKAAEKL---- 203 (293)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEECCcCc-----ccchHHHHhcCCEEccCHHHHHHHhCCCCCCcchHHHHHHHH----
Confidence 45678889999999999999999996431 111356788999999999999999875544445677788888
Q ss_pred CCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHHHHhhhhh
Q 019402 249 KASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQ 328 (341)
Q Consensus 249 ~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~ 328 (341)
...|++.++||+|++|++++++++.++++++++ +++||+||||+|+|||++++++|+++++|+++|+++|+.+++
T Consensus 204 --~~~g~~~vvvt~G~~g~~~~~~~~~~~~~~~~~---~~vdt~GAGDaf~Ag~l~~l~~g~~~~~al~~a~~~Aa~~~~ 278 (293)
T TIGR02152 204 --LEKGVKNVIITLGSKGALLVSKDESKLIPAFKV---KAVDTTAAGDTFNGAFAVALAEGKSLEDAIRFANAAAAISVT 278 (293)
T ss_pred --HHcCCCeEEEEeCCCceEEEeCCceeEccCCCC---ceeCCCCcHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHc
Confidence 556789999999999999998888888776654 789999999999999999999999999999999999999999
Q ss_pred hcccc--CCCCCCC
Q 019402 329 RSGCT--YPPKPEF 340 (341)
Q Consensus 329 ~~g~~--~p~~~e~ 340 (341)
+.|+. +|+.+|+
T Consensus 279 ~~G~~~~~~~~~~~ 292 (293)
T TIGR02152 279 RKGAQSSIPYLEEV 292 (293)
T ss_pred ccCcccCCCChHHc
Confidence 99996 4887765
|
This model describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences, few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not. |
| >cd01942 ribokinase_group_A Ribokinase-like subgroup A | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-42 Score=307.88 Aligned_cols=277 Identities=23% Similarity=0.262 Sum_probs=226.9
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
+|+++|++++|++..++ ++|..++.....+....+||++.|+|.++++ + |.++.++|
T Consensus 1 ~v~~iG~~~~D~~~~v~--------------------~~p~~~~~~~~~~~~~~~GG~~~Nva~~l~~-l--g~~~~~~~ 57 (279)
T cd01942 1 DVAVVGHLNYDIILKVE--------------------SFPGPFESVLVKDLRREFGGSAGNTAVALAK-L--GLSPGLVA 57 (279)
T ss_pred CEEEEecceeeeEeecc--------------------cCCCCCceEecceeeecCCcHHHHHHHHHHH-c--CCCceEEE
Confidence 58999999999999887 6787777788889999999999999999998 4 59999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEe-ecCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcceEEEE
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYY-EDESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYI 163 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~-~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i 163 (341)
.+|+|.+|+.+++.|+++||+++++ ...+.+|+.+++..+ +|+|++...+++...+++++ . ...+++++++|+
T Consensus 58 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~ 132 (279)
T cd01942 58 AVGEDFHGRLYLEELREEGVDTSHVRVVDEDSTGVAFILTDGDDNQIAYFYPGAMDELEPND-E----ADPDGLADIVHL 132 (279)
T ss_pred EecCCcchHHHHHHHHHcCCCccceEEcCCCCcceEEEEEcCCCCEEEEecCCcccccccCC-c----hhhhcccCEEEe
Confidence 9999999999999999999999998 456677999888887 56776665666666666554 2 256789999999
Q ss_pred eccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHHH
Q 019402 164 AGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALK 243 (341)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~ 243 (341)
++.. .+.++++.+++.|.++++|+.... ...+.+.+.++++++|++++|++|+..+....+. .+..
T Consensus 133 ~~~~------~~~~~~~~~~~~g~~v~~D~~~~~-~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~--~~~~----- 198 (279)
T cd01942 133 SSGP------GLIELARELAAGGITVSFDPGQEL-PRLSGEELEEILERADILFVNDYEAELLKERTGL--SEAE----- 198 (279)
T ss_pred CCch------HHHHHHHHHHHcCCeEEEcchhhh-hhccHHHHHHHHhhCCEEecCHHHHHHHHhhcCC--ChHH-----
Confidence 8752 467788888888999999997532 1223355778899999999999999654332221 1111
Q ss_pred HhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHHHH
Q 019402 244 ISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAA 323 (341)
Q Consensus 244 l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~a 323 (341)
...+++.||+|+|++|++++.+++.+++|++ ++++++|||||||+|+|||+++|++|+++++|+++|+++|
T Consensus 199 -------~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~--~~~~vvDttGAGDaf~a~~i~~l~~g~~l~~al~~a~~~A 269 (279)
T cd01942 199 -------LASGVRVVVVTLGPKGAIVFEDGEEVEVPAV--PAVKVVDTTGAGDAFRAGFLYGLLRGYDLEESLRLGNLAA 269 (279)
T ss_pred -------HhcCCCEEEEEECCCceEEEECCceEEccCc--CcCCCcCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 1136789999999999999998888888865 1348999999999999999999999999999999999999
Q ss_pred hhhhhhcccc
Q 019402 324 NVVIQRSGCT 333 (341)
Q Consensus 324 a~~v~~~g~~ 333 (341)
+.++++.|++
T Consensus 270 a~~~~~~G~~ 279 (279)
T cd01942 270 SLKVERRGAQ 279 (279)
T ss_pred HHHHcccCCC
Confidence 9999999873
|
Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. |
| >COG0524 RbsK Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=314.27 Aligned_cols=295 Identities=30% Similarity=0.402 Sum_probs=244.5
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
+|+++|++++|++....+ .+|..++..........+||++.|+|+++++ + |.++.++|
T Consensus 1 ~v~~iG~~~vD~~~~~~~-------------------~~~~~~~~~~~~~~~~~~GG~~~N~A~~~a~-l--G~~~~~~~ 58 (311)
T COG0524 1 DVVVIGEANVDLIAQVVD-------------------RLPEPGETVLGDFFKVAGGGKGANVAVALAR-L--GAKVALIG 58 (311)
T ss_pred CEEEECchhhheehhhcc-------------------CCCCCcccccccceeecCCchHHHHHHHHHH-c--CCceEEEE
Confidence 489999999999997432 5677776666667889999999999999998 4 49999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeeccc-ccccCCcccCCCchhHhhhhcceEEE
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLS-AANCYKSEHLKRPEIWSIVEKAKYYY 162 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~ 162 (341)
.+|+|.+|+.+++.|++.||+++++. ....+|+.+++.++ +|+|.+..+.+ +...++++.+.. ..+...+++|
T Consensus 59 ~vG~D~~g~~~~~~l~~~GVd~~~~~~~~~~~tg~~~i~~~~~g~r~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~~ 134 (311)
T COG0524 59 AVGDDDFGEFLLEELRKEGVDTSHVVTDEGATTGLALILVDEDGERTFVFYRGAAALLLTPEDLDE----DELAGADVLH 134 (311)
T ss_pred EecCcHHHHHHHHHHHHcCCccceEEEcCCCcceEEEEEEcCCCceeEEEECCcccccCChHHcCh----HHHhhcCeee
Confidence 99999999999999999999999985 45558899988887 68999988776 455577766663 5678999999
Q ss_pred EeccccccCHHHHHHHHHHHHhcCCeEEEeCC--cHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHH
Q 019402 163 IAGFFLTVSPESIQMVAEHAAAKNKVFMMNLS--APFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEI 240 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~--~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~ 240 (341)
++++.+..+++.+..+++.+++.+.++.+|+. ...|. .+.+.++++++|++++|++|++.+++. ..+..+.
T Consensus 135 ~~~~~l~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~---~~~~~~~l~~~d~~~~n~~E~~~l~g~----~~~~~~~ 207 (311)
T COG0524 135 ISGIQLEIPPEALLAALELAKAAGVTVSFDLNPRPALWD---RELLEELLALADILFPNEEEAELLTGL----EEDAEAA 207 (311)
T ss_pred EEEeecCCChHHHHHHHHHHHHcCCeEEEecCCCccccc---hhhHHHHHhhCCEEeCCHHHHHHHhCC----CccHHHH
Confidence 99998877779999999999999998666654 33322 466888999999999999999999863 2345555
Q ss_pred HHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHH
Q 019402 241 ALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGC 320 (341)
Q Consensus 241 ~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~ 320 (341)
...+ +..+++.+|+|+|++|+++++.+...+++.++.+++++||||||||+|.|||++++++|+++++|+++|+
T Consensus 208 ~~~~------~~~~~~~vvvt~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~agfl~~~~~g~~~~~a~~~a~ 281 (311)
T COG0524 208 AALL------LAKGVKTVVVTLGAEGAVVFTGGGEVTVPVPAAFKVKVVDTTGAGDAFAAGFLAGLLEGKSLEEALRFAN 281 (311)
T ss_pred HHHH------hhcCCCEEEEEeCCCcEEEEeCCCceeeccCCCCccccccCCCchHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 5555 5678999999999999999987543555544455669999999999999999999999999999999999
Q ss_pred HHHhhhhhhcccc--CCCCCC
Q 019402 321 YAANVVIQRSGCT--YPPKPE 339 (341)
Q Consensus 321 ~~aa~~v~~~g~~--~p~~~e 339 (341)
++|++++++.|+. +|..+|
T Consensus 282 a~aa~~~~~~g~~~~~p~~~~ 302 (311)
T COG0524 282 AAAALAVTRPGARPSLPTREE 302 (311)
T ss_pred HHhhhhhccCCCCCCCCCHHH
Confidence 9999999999995 555554
|
|
| >PRK09434 aminoimidazole riboside kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-42 Score=309.76 Aligned_cols=285 Identities=24% Similarity=0.326 Sum_probs=227.3
Q ss_pred CcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceE
Q 019402 3 YEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATS 82 (341)
Q Consensus 3 ~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~ 82 (341)
||++|+++|++++|++...+ ......+||++.|+|.++++ | |.++.
T Consensus 1 ~~~~il~iG~~~iD~~~~~~-------------------------------~~~~~~~GG~~~N~a~~l~~-L--G~~~~ 46 (304)
T PRK09434 1 MMNKVWVLGDAVVDLIPEGE-------------------------------NRYLKCPGGAPANVAVGIAR-L--GGESG 46 (304)
T ss_pred CCCcEEEecchheeeecCCC-------------------------------CceeeCCCChHHHHHHHHHH-c--CCCce
Confidence 34599999999999984211 23456899999999999998 4 59999
Q ss_pred EEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeec--ccccccCCcccCCCchhHhhhhcc
Q 019402 83 YIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVAN--LSAANCYKSEHLKRPEIWSIVEKA 158 (341)
Q Consensus 83 li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 158 (341)
++|.+|+|.+|+++++.|+++||++.++. .++.+|+.+++..+ +|+|++... .++...++.++++ .+.+.
T Consensus 47 ~v~~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~------~~~~~ 120 (304)
T PRK09434 47 FIGRVGDDPFGRFMQQTLQDEGVDTTYLRLDPAHRTSTVVVDLDDQGERSFTFMVRPSADLFLQPQDLP------PFRQG 120 (304)
T ss_pred EEEEecCchHHHHHHHHHHHcCCCCcceEEcCCCCceEEEEEECCCCCEeEEEecCCchhhhCCHHHhh------hhcCC
Confidence 99999999999999999999999999884 56677888888886 488876433 2222233333332 36789
Q ss_pred eEEEEeccccccC--HHHHHHHHHHHHhcCCeEEEeCCcH--HHH--hhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCC
Q 019402 159 KYYYIAGFFLTVS--PESIQMVAEHAAAKNKVFMMNLSAP--FIC--EFFREPQEKALPYMDYVFGNETEARTFAKVHGW 232 (341)
Q Consensus 159 ~~v~i~~~~~~~~--~~~~~~~~~~~~~~~~~v~~d~~~~--~~~--~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~ 232 (341)
+++|+++.....+ .+...++++.+++++.++.+|+... .|. ...++.+.++++++|++++|++|+..+++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~e~~~l~g---- 196 (304)
T PRK09434 121 EWLHLCSIALSAEPSRSTTFEAMRRIKAAGGFVSFDPNLREDLWQDEAELRECLRQALALADVVKLSEEELCFLSG---- 196 (304)
T ss_pred CEEEEccccccCchHHHHHHHHHHHHHHcCCEEEECCCCChhhccCHHHHHHHHHHHHHhcceeeCCHHHHHHHhC----
Confidence 9999988654323 3566788999999999999998632 221 12345577889999999999999999876
Q ss_pred CCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCC--
Q 019402 233 ETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEK-- 310 (341)
Q Consensus 233 ~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~-- 310 (341)
.++.+++++.+.+ ..+++.+|||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+
T Consensus 197 -~~~~~~~~~~l~~-----~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~---~~vDttGAGD~f~ag~~~~l~~g~~~ 267 (304)
T PRK09434 197 -TSQLEDAIYALAD-----RYPIALLLVTLGAEGVLVHTRGQVQHFPAPSV---DPVDTTGAGDAFVAGLLAGLSQAGLW 267 (304)
T ss_pred -CCCHHHHHHHHHh-----hcCCcEEEEEecCCceEEEeCCceeEeCCCCC---CCCcCCCchHHHHHHHHHHHHcCCCc
Confidence 3467788888832 14678999999999999998888888887655 889999999999999999999997
Q ss_pred ----CHHHHHHHHHHHHhhhhhhccc--cCCCCCCC
Q 019402 311 ----PVEDCVRTGCYAANVVIQRSGC--TYPPKPEF 340 (341)
Q Consensus 311 ----~~~~a~~~A~~~aa~~v~~~g~--~~p~~~e~ 340 (341)
++++|+++|+++|+.++++.|+ .+|+.+++
T Consensus 268 ~~~~~~~~a~~~a~~~Aa~~v~~~g~~~~~~~~~~~ 303 (304)
T PRK09434 268 TDEAELAEIIAQAQACGALATTAKGAMTALPNRQEL 303 (304)
T ss_pred cchHHHHHHHHHHHHHHHHHHcccCCcCCCCChHHc
Confidence 8999999999999999999996 57777665
|
|
| >PF00294 PfkB: pfkB family carbohydrate kinase; InterPro: IPR011611 This entry includes a variety of carbohydrate and pyrimidine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-43 Score=316.28 Aligned_cols=291 Identities=26% Similarity=0.386 Sum_probs=235.5
Q ss_pred cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEE
Q 019402 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~l 83 (341)
|.+|+++|++++|++...+ ++ .+...+..+....+||.+.|+|.+|++ + |.++.+
T Consensus 1 m~~v~~iG~~~iD~~~~~~--------------------~~--~~~~~~~~~~~~~~GG~~~n~a~~l~~-L--G~~v~~ 55 (301)
T PF00294_consen 1 MKKVLVIGEVNIDIIGYVD--------------------RF--KGDLVRVSSVKRSPGGAGANVAIALAR-L--GADVAL 55 (301)
T ss_dssp EEEEEEESEEEEEEEEESS--------------------SH--TTSEEEESEEEEEEESHHHHHHHHHHH-T--TSEEEE
T ss_pred CCcEEEECccceEEEeecC--------------------Cc--CCcceecceEEEecCcHHHHHHHHHHh-c--cCcceE
Confidence 4589999999999999887 22 333346788899999999999999998 4 499999
Q ss_pred EEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcceEE
Q 019402 84 IGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYY 161 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 161 (341)
+|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++..+ +|+|++..+.+....++.+.+ .+..+.+++++
T Consensus 56 i~~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 131 (301)
T PF00294_consen 56 IGKVGDDFFGEIILEELKERGVDTSYIPRDGDEPTGRCLIIVDPDGERTFVFSPGANSDLTPDEL----DEEAIDEADIL 131 (301)
T ss_dssp EEEEESSHHHHHHHHHHHHTTEEETTEEEESSSEEEEEEEEEETTSEEEEEEEEGGGGGGGHHHH----HHHHHHTESEE
T ss_pred EeeccCcchhhhhhhccccccccccccccccccccceeEeeecccccceeeeccccccccccccc----cccccccccce
Confidence 9999999999999999999999999985 56678999999988 689998888777777776655 34788999999
Q ss_pred EEec-ccc-ccCHHHHHHHHHHHHhcCC--eEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCH
Q 019402 162 YIAG-FFL-TVSPESIQMVAEHAAAKNK--VFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNV 237 (341)
Q Consensus 162 ~i~~-~~~-~~~~~~~~~~~~~~~~~~~--~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~ 237 (341)
++++ ... ..+.+.+..+.+.+++.+. ++..++... . .++.+.++++++|++++|++|+..+++... .+.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~l~~~dil~~n~~E~~~l~~~~~---~~~ 204 (301)
T PF00294_consen 132 HLSGVSLPEGIPEDLLEALAKAAKKNGPFDPVFRDPSWD---D-LREDLKELLPYADILKPNEEEAEALTGSKI---DDP 204 (301)
T ss_dssp EEESGHCSTTSHHHHHHHHHHHHHHTTEEEEEEEGGGSH---H-HHHHHHHHHHTSSEEEEEHHHHHHHHTCST---SSH
T ss_pred eecccccccccccceeeeccccccccccccccccccccc---c-cchhhhhhccccchhccccccccccccccc---cch
Confidence 9999 333 3344667777777777663 333343322 1 346688888999999999999999988543 244
Q ss_pred HHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHH
Q 019402 238 EEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVR 317 (341)
Q Consensus 238 ~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~ 317 (341)
+++.+.+.++ +..+++.+++|+|++|++++++++.+++++++ +++++|||||||+|+|||++++++|+++++|++
T Consensus 205 ~~~~~~~~~l---~~~g~~~vivt~G~~G~~~~~~~~~~~~~~~~--~~~vvdttGAGD~f~A~~i~~l~~~~~~~~a~~ 279 (301)
T PF00294_consen 205 EDALAALREL---QARGVKIVIVTLGEDGALYYTNDESYHVPPVP--PVNVVDTTGAGDAFAAGFIYGLLSGMSLEEALK 279 (301)
T ss_dssp HHHHHHHHHH---HHTTSSEEEEEEGGGEEEEEETTEEEEEEEES--SSSSSSCTTHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred hhhhcccccc---chhhhhhhhccccccCcccccccccccccccc--cccccceeccchhhhHHHHHHHHcCCCHHHHHH
Confidence 5444444221 34678999999999999999999999998752 448999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhccccCC
Q 019402 318 TGCYAANVVIQRSGCTYP 335 (341)
Q Consensus 318 ~A~~~aa~~v~~~g~~~p 335 (341)
+|+++|+.+|++.|+..|
T Consensus 280 ~a~~~aa~~v~~~g~~~~ 297 (301)
T PF00294_consen 280 FANAAAALKVQQPGPRSP 297 (301)
T ss_dssp HHHHHHHHHHTSSSSSGG
T ss_pred HHHHHHHHHhCCCCCcCC
Confidence 999999999999999644
|
The family includes phosphomethylpyrimidine kinase (2.7.4.7 from EC). This enzyme is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 1VM7_B 2ABQ_B 3GO7_B 3GO6_B 3FHY_A 4EOH_B 2YXU_A 2F7K_A 3KEU_A 2YXT_B .... |
| >cd01166 KdgK 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-42 Score=307.92 Aligned_cols=283 Identities=27% Similarity=0.359 Sum_probs=227.2
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
+|+|+|++++|++...+. +.....+....+||++.|+|.+|++ + |.++.++|
T Consensus 1 ~i~~iG~~~iD~~~~~~~-------------------------~~~~~~~~~~~~GG~~~N~a~~la~-l--g~~~~~i~ 52 (294)
T cd01166 1 DVVTIGEVMVDLSPPGGG-------------------------RLEQADSFRKFFGGAEANVAVGLAR-L--GHRVALVT 52 (294)
T ss_pred CeEEechhheeeecCCCC-------------------------ccchhhccccccCChHHHHHHHHHh-c--CCceEEEE
Confidence 589999999999975541 2244567788999999999999998 4 59999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEe-ecCCCCcceEEEEEe-CCeeceeecc--cccccCCcccCCCchhHhhhhcceEE
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYY-EDESAPTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKRPEIWSIVEKAKYY 161 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~-~~~~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v 161 (341)
.+|+|.+|+.+.+.|++.||+++++ +..+.+|+.+++.++ +|+|++..+. ++...++.+.+. ...++++|++
T Consensus 53 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v 128 (294)
T cd01166 53 AVGDDPFGRFILAELRREGVDTSHVRVDPGRPTGLYFLEIGAGGERRVLYYRAGSAASRLTPEDLD----EAALAGADHL 128 (294)
T ss_pred ecCCCHHHHHHHHHHHHcCCCCceEEEeCCCcceEEEEEecCCCCceEEEeCCCChhHhCChhhCC----HHHHhCCCEE
Confidence 9999999999999999999999998 466778899988886 4788776553 233455555554 3567899999
Q ss_pred EEeccccccCH---HHHHHHHHHHHhcCCeEEEeCCcHHH---HhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCC
Q 019402 162 YIAGFFLTVSP---ESIQMVAEHAAAKNKVFMMNLSAPFI---CEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETD 235 (341)
Q Consensus 162 ~i~~~~~~~~~---~~~~~~~~~~~~~~~~v~~d~~~~~~---~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~ 235 (341)
|++++.+...+ +.+.++++.+++.+.++++|+..... .....+.+.++++++|++++|++|++.+++..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~~~~~~~~~dil~~n~~E~~~l~~~~----- 203 (294)
T cd01166 129 HLSGITLALSESAREALLEALEAAKARGVTVSFDLNYRPKLWSAEEAREALEELLPYVDIVLPSEEEAEALLGDE----- 203 (294)
T ss_pred EEcCcchhhCHHHHHHHHHHHHHHHHcCCEEEECCCCcchhcChHHHHHHHHHHHHhCCEEEcCHHHHHHHhCCC-----
Confidence 99987653333 77888999999999999999974321 11133456788999999999999999998632
Q ss_pred CHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHH
Q 019402 236 NVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDC 315 (341)
Q Consensus 236 ~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a 315 (341)
...++.+.+.++ ..+++.++||+|++|++++.+++.+++|++++ +++||+||||+|+|||+++|++|+++++|
T Consensus 204 ~~~~~~~~~~~l----~~g~~~viit~G~~G~~~~~~~~~~~~~~~~~---~~vdt~GAGD~f~a~~~~~l~~g~~~~~a 276 (294)
T cd01166 204 DPTDAAERALAL----ALGVKAVVVKLGAEGALVYTGGGRVFVPAYPV---EVVDTTGAGDAFAAGFLAGLLEGWDLEEA 276 (294)
T ss_pred CchhHHHHHHhh----cCCccEEEEEEcCCceEEEECCceEEeCCCCc---ccccCCCchHHHHHHHHHHHHcCCCHHHH
Confidence 122333333211 25788999999999999998888888887655 78999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhccc
Q 019402 316 VRTGCYAANVVIQRSGC 332 (341)
Q Consensus 316 ~~~A~~~aa~~v~~~g~ 332 (341)
+++|+++|+.+|++.|+
T Consensus 277 ~~~a~~~aa~~i~~~G~ 293 (294)
T cd01166 277 LRFANAAAALVVTRPGD 293 (294)
T ss_pred HHHHHHHHHHHHhcCCC
Confidence 99999999999999986
|
KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources. |
| >PRK09954 putative kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-42 Score=317.34 Aligned_cols=289 Identities=15% Similarity=0.162 Sum_probs=223.3
Q ss_pred ceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEE
Q 019402 5 GILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li 84 (341)
..|+|+|.+++|++..++. ++|..++ ........+||++.|+|.++++ +|.++.++
T Consensus 58 ~~v~viG~~~vD~~~~~~~-------------------~~p~~~~--~~~~~~~~~GG~~~NvA~~lar---LG~~v~~i 113 (362)
T PRK09954 58 EYCVVVGAINMDIRGMADI-------------------RYPQAAS--HPGTIHCSAGGVGRNIAHNLAL---LGRDVHLL 113 (362)
T ss_pred ccEEEEEEEEEEEEEeeCC-------------------cCcCCCC--CCceEEEecCcHHHHHHHHHHH---cCCCeEEE
Confidence 4789999999999987752 3455443 4456788899999999999998 45999999
Q ss_pred EeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEeCCeeceeeccc--ccccCCcccCCCchhHhhhhcceEE
Q 019402 85 GCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVVGGERSLVANLS--AANCYKSEHLKRPEIWSIVEKAKYY 161 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v 161 (341)
|.+|+|.+|+++++.|++.||+++++. .++.+|+.++++.++++++++...+ ....++++.+.. ..+.+..++++
T Consensus 114 g~VG~D~~G~~i~~~l~~~GVd~~~~~~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v 191 (362)
T PRK09954 114 SAIGDDFYGETLLEETRRAGVNVSGCIRLHGQSTSTYLAIANRQDETVLAINDTHILQQLTPQLLNG--SRDLIRHAGVV 191 (362)
T ss_pred EEECCCHHHHHHHHHHHHcCCCccceEEcCCCCCeEEEEEEcCCCCEEEEEcCchhhhcCCHHHHHH--HHHHHhcCCEE
Confidence 999999999999999999999999874 5666788777776655555544332 223455443332 23456788999
Q ss_pred EEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHH
Q 019402 162 YIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIA 241 (341)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~ 241 (341)
++++ +.+++.+..+++.+ +++++++|+.+..+ .+.+.++++++|++++|++|++.+++....+.++.++++
T Consensus 192 ~~~~---~~~~~~~~~~~~~a--~~~~v~~D~~~~~~----~~~~~~~l~~~dil~~n~~Ea~~l~g~~~~~~~~~~~~~ 262 (362)
T PRK09954 192 LADC---NLTAEALEWVFTLA--DEIPVFVDTVSEFK----AGKIKHWLAHIHTLKPTQPELEILWGQAITSDADRNAAV 262 (362)
T ss_pred EEEC---CCCHHHHHHHHHhC--CCCcEEEECCCHHH----hhhhhhhhccccEEecCHHHHHHHcCCCCCCHHHHHHHH
Confidence 8876 45666666676654 47889999875431 123667899999999999999999874332233455777
Q ss_pred HHHhcCCCCCCCCccEEEEeeCCCCEEEEeCC-eEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHH
Q 019402 242 LKISQWPKASGTHKRITVITQGADPVVVAEDG-KVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGC 320 (341)
Q Consensus 242 ~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~-~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~ 320 (341)
+.+ ...|++.||||+|++|++++..+ ..+++|++++ +++|||||||+|+|||++++++|+++++|+++|+
T Consensus 263 ~~l------~~~g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~Ag~l~~l~~g~~~~eal~~a~ 333 (362)
T PRK09954 263 NAL------HQQGVQQIFVYLPDESVFCSEKDGEQFLLTAPAH---TTVDSFGADDGFMAGLVYSFLEGYSFRDSARFAM 333 (362)
T ss_pred HHH------HHcCCCEEEEEeCCccEEEEeCCCceEeccCCCc---ccccccchHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 777 56688999999999999988644 4566676654 8999999999999999999999999999999999
Q ss_pred HHHhhhhhhccccCCCC
Q 019402 321 YAANVVIQRSGCTYPPK 337 (341)
Q Consensus 321 ~~aa~~v~~~g~~~p~~ 337 (341)
++|++++.+.....|++
T Consensus 334 a~Aal~~~s~~~~~~~~ 350 (362)
T PRK09954 334 ACAAISRASGSLNNPTL 350 (362)
T ss_pred HHHHHHhcCCCcCCCcC
Confidence 99999988776665654
|
|
| >cd01167 bac_FRK Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-42 Score=306.51 Aligned_cols=278 Identities=25% Similarity=0.327 Sum_probs=227.8
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
||+++|++++|++...+ +. ..+....+||+++|+|.++++ + |.++.++|
T Consensus 1 ~ilviG~~~~D~~~~~~--------------------~~--------~~~~~~~~GG~~~n~a~~l~~-l--g~~v~~i~ 49 (295)
T cd01167 1 KVVCFGEALIDFIPEGS--------------------GA--------PETFTKAPGGAPANVAVALAR-L--GGKAAFIG 49 (295)
T ss_pred CEEEEcceeEEEecCCC--------------------CC--------CccccccCCCcHHHHHHHHHh-c--CCCeEEEE
Confidence 69999999999998665 11 466788999999999999998 4 49999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecccccccCCccc-CCCchhHhhhhcceEEE
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAANCYKSEH-LKRPEIWSIVEKAKYYY 162 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~ 162 (341)
.+|+|.+|+.+++.|++.||++.++. ..+.+|+.+++.++ +|+|++....++......+. +. .+.++++++++
T Consensus 50 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~ 125 (295)
T cd01167 50 KVGDDEFGDFLLETLKEAGVDTRGIQFDPAAPTTLAFVTLDADGERSFEFYRGPAADLLLDTELN----PDLLSEADILH 125 (295)
T ss_pred eecCcHHHHHHHHHHHHcCCCchheeecCCCCceEEEEEECCCCCEeEEeecCCcHhhhcCccCC----hhHhccCCEEE
Confidence 99999999999999999999999885 66778999998887 68888776555433322221 22 25688999999
Q ss_pred Eeccccc--cCHHHHHHHHHHHHhcCCeEEEeCCcH--HHHh--hhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCC
Q 019402 163 IAGFFLT--VSPESIQMVAEHAAAKNKVFMMNLSAP--FICE--FFREPQEKALPYMDYVFGNETEARTFAKVHGWETDN 236 (341)
Q Consensus 163 i~~~~~~--~~~~~~~~~~~~~~~~~~~v~~d~~~~--~~~~--~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~ 236 (341)
++++... ...+.+.++++.+++.+.++++|+... .|.. ...+.+.++++++|++++|++|+..+++ ...
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~d~l~~n~~E~~~l~~-----~~~ 200 (295)
T cd01167 126 FGSIALASEPSRSALLELLEAAKKAGVLISFDPNLRPPLWRDEEEARERIAELLELADIVKLSDEELELLFG-----EED 200 (295)
T ss_pred EechhhccchHHHHHHHHHHHHHHcCCEEEEcCCCChhhcCCHHHHHHHHHHHHHhCCEEEecHHHHHHHhC-----CCC
Confidence 9876321 123678889999999999999998632 2211 1345577899999999999999999876 234
Q ss_pred HHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCC------
Q 019402 237 VEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEK------ 310 (341)
Q Consensus 237 ~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~------ 310 (341)
..++++.+ ...+++.+|||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+
T Consensus 201 ~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~a~~~---~vvDttGAGD~f~a~~~~~l~~g~~~~~~~ 271 (295)
T cd01167 201 PEEIAALL------LLFGLKLVLVTRGADGALLYTKGGVGEVPGIPV---EVVDTTGAGDAFVAGLLAQLLSRGLLALDE 271 (295)
T ss_pred HHHHHHHH------hhcCCCEEEEecCCcceEEEECCcceeeCCCCc---ceeeCCCccHHHHHHHHHHHHhCCcccccH
Confidence 55666777 567889999999999999999888888887764 899999999999999999999999
Q ss_pred -CHHHHHHHHHHHHhhhhhhccc
Q 019402 311 -PVEDCVRTGCYAANVVIQRSGC 332 (341)
Q Consensus 311 -~~~~a~~~A~~~aa~~v~~~g~ 332 (341)
++++|+++|+++|+.+|+++|+
T Consensus 272 ~~~~~a~~~a~~~aa~~~~~~G~ 294 (295)
T cd01167 272 DELAEALRFANAVGALTCTKAGA 294 (295)
T ss_pred HHHHHHHHHHHHhhHHHhcccCC
Confidence 9999999999999999999986
|
This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate. |
| >cd01947 Guanosine_kinase_like Guanosine kinase-like sugar kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=300.96 Aligned_cols=263 Identities=19% Similarity=0.309 Sum_probs=215.6
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
+|+++|++++|++..++ +.|.+++..+..+....+||++.|+|.+|++ + |.++.++|
T Consensus 1 ~il~iG~~~iD~~~~~~--------------------~~~~~~~~~~~~~~~~~~GG~~~Nva~~l~~-l--G~~~~~i~ 57 (265)
T cd01947 1 KIAVVGHVEWDIFLSLD--------------------APPQPGGISHSSDSRESPGGGGANVAVQLAK-L--GNDVRFFS 57 (265)
T ss_pred CEEEEeeeeEEEEEEec--------------------CCCCCCceeecccceeecCchHHHHHHHHHH-c--CCceEEEE
Confidence 68999999999999987 5788888888889999999999999999998 4 59999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcceEEEEe
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIA 164 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~ 164 (341)
.+|+|.+|+.+++.|++ ++++..++..+..|+.++++++ +|+|+++...... ++.+. ++.+.++|++|++
T Consensus 58 ~vG~D~~g~~i~~~l~~-~~~~~~~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~----~~~~~----~~~~~~~~~~~~~ 128 (265)
T cd01947 58 NLGRDEIGIQSLEELES-GGDKHTVAWRDKPTRKTLSFIDPNGERTITVPGERL----EDDLK----WPILDEGDGVFIT 128 (265)
T ss_pred EecCChHHHHHHHHHHh-cCCcceEEecCCCCceEEEEECCCCcceEEecCCCC----cccCC----HhHhccCCEEEEe
Confidence 99999999999999999 9988887655667999988886 6888775543211 22222 2467899999998
Q ss_pred ccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHHHH
Q 019402 165 GFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKI 244 (341)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l 244 (341)
+.. ...++++.+++.+ .+++|+.... ..+.+.++++++|++++|++|+..+.. ++.+
T Consensus 129 ~~~------~~~~~~~~a~~~~-~~~~d~~~~~----~~~~~~~~~~~~d~~~~n~~e~~~l~~------------~~~~ 185 (265)
T cd01947 129 AAA------VDKEAIRKCRETK-LVILQVTPRV----RVDELNQALIPLDILIGSRLDPGELVV------------AEKI 185 (265)
T ss_pred ccc------ccHHHHHHHHHhC-CeEeccCccc----cchhHHHHhhhCCEEEeCHHHHHHhhh------------HHHH
Confidence 753 1245667777765 4566765432 123467889999999999999988752 3344
Q ss_pred hcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 019402 245 SQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAAN 324 (341)
Q Consensus 245 ~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa 324 (341)
...+++.+|||+|++|++++++++.++++++++ +++|||||||+|.|||++++++|+++++|+++|+++|+
T Consensus 186 ------~~~~~~~viit~G~~Ga~~~~~~~~~~~~~~~~---~vvDttGAGDaF~ag~l~~l~~g~~~~~al~~a~~~Aa 256 (265)
T cd01947 186 ------AGPFPRYLIVTEGELGAILYPGGRYNHVPAKKA---KVPDSTGAGDSFAAGFIYGLLKGWSIEEALELGAQCGA 256 (265)
T ss_pred ------HhccCCEEEEEeCCCCeEEEECCeeEECCCCCC---CCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 455789999999999999999888888887654 89999999999999999999999999999999999999
Q ss_pred hhhhhccc
Q 019402 325 VVIQRSGC 332 (341)
Q Consensus 325 ~~v~~~g~ 332 (341)
.++++.|+
T Consensus 257 ~~v~~~G~ 264 (265)
T cd01947 257 ICVSHFGP 264 (265)
T ss_pred HHHhccCC
Confidence 99999986
|
Found in bacteria and archaea, the guanosine kinase-like group is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. |
| >cd01172 RfaE_like RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-42 Score=309.79 Aligned_cols=292 Identities=20% Similarity=0.229 Sum_probs=225.7
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchH--HHHhccCCceeecCchhHHHHHHHHHHhCCCCceEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMY--DELASKENVEYIAGGATQNSIKVAQWMLQIPGATSY 83 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~l 83 (341)
+|+++|+.++|+++.++.. ++|.. ............+|| +.|+|.+|++ | |.++.+
T Consensus 1 ~vl~iG~~~~D~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~GG-~~NvA~~la~-L--G~~~~~ 58 (304)
T cd01172 1 KVLVVGDVILDEYLYGDVE------------------RISPEAPVPVVKVEREEIRLGG-AANVANNLAS-L--GAKVTL 58 (304)
T ss_pred CEEEEcceeEEeeEeeccc------------------cccCCCCcceEEeeeEEecCcH-HHHHHHHHHH-h--CCCeEE
Confidence 5899999999999875410 22111 111223456678999 6999999998 4 499999
Q ss_pred EEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCC--chhHhhhhcceEE
Q 019402 84 IGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKR--PEIWSIVEKAKYY 161 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v 161 (341)
+|.+|+|.+|+.+++.|+++||++++++.++.+|+.+++..+++++.+..+......++.+.... ......++++|++
T Consensus 59 i~~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 138 (304)
T cd01172 59 LGVVGDDEAGDLLRKLLEKEGIDTDGIVDEGRPTTTKTRVIARNQQLLRVDREDDSPLSAEEEQRLIERIAERLPEADVV 138 (304)
T ss_pred EEEEcCCccHHHHHHHHHhCCCCcceEecCCCCceEEEEEecCCcEEEEEecCCCCCCCHHHHHHHHHHHHHhhccCCEE
Confidence 99999999999999999999999998766666788887777655555544333333333322111 1123457899999
Q ss_pred EEecccc-ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHH
Q 019402 162 YIAGFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEI 240 (341)
Q Consensus 162 ~i~~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~ 240 (341)
+++++.. .++++.+..+++.+++.++++++|++...+ ..++++|++++|++|++.+++....+.++.+++
T Consensus 139 ~~s~~~~~~~~~~~~~~~~~~a~~~~~~v~~D~~~~~~---------~~~~~~d~l~~n~~E~~~l~~~~~~~~~~~~~~ 209 (304)
T cd01172 139 ILSDYGKGVLTPRVIEALIAAARELGIPVLVDPKGRDY---------SKYRGATLLTPNEKEAREALGDEINDDDELEAA 209 (304)
T ss_pred EEEcCCCCccCHHHHHHHHHHHHhcCCCEEEeCCCcch---------hhccCCcEeCCCHHHHHHHhCCCCCChHHHHHH
Confidence 9987643 456788999999999999999999976431 467899999999999999987543333455666
Q ss_pred HHHHhcCCCCCCCCccEEEEeeCCCCEEEEe-CCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHH
Q 019402 241 ALKISQWPKASGTHKRITVITQGADPVVVAE-DGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTG 319 (341)
Q Consensus 241 ~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~-~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A 319 (341)
++.+. ...+++.+|||+|++|+++++ +++.+++|++++ +++|||||||+|+|||+++|++|+++++|+++|
T Consensus 210 ~~~l~-----~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~---~vvdttGAGDaf~ag~i~~l~~g~~~~~al~~a 281 (304)
T cd01172 210 GEKLL-----ELLNLEALLVTLGEEGMTLFERDGEVQHIPALAK---EVYDVTGAGDTVIATLALALAAGADLEEAAFLA 281 (304)
T ss_pred HHHHH-----HHhCCCeEEEEcCCCccEEEcCCCcEEEecCCCC---CCCCCcCccHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 66662 134789999999999999998 777888887754 899999999999999999999999999999999
Q ss_pred HHHHhhhhhhccccCCC
Q 019402 320 CYAANVVIQRSGCTYPP 336 (341)
Q Consensus 320 ~~~aa~~v~~~g~~~p~ 336 (341)
+++|+.+|++.|+....
T Consensus 282 ~a~Aa~~~~~~g~~~~~ 298 (304)
T cd01172 282 NAAAGVVVGKVGTAPVT 298 (304)
T ss_pred HHHhheeeecCCCCCcC
Confidence 99999999999986443
|
LPS plays an important role in maintaining the structural integrity of the bacterial outer membrane of gram-negative bacteria. RfaE consists of two domains, a sugar kinase domain, represented here, and a domain belonging to the cytidylyltransferase superfamily. |
| >cd01939 Ketohexokinase Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=304.26 Aligned_cols=278 Identities=18% Similarity=0.226 Sum_probs=219.3
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
.|+++|++++|++..++ ++|.+++.....+...++||++.|+|.+|++ + |.++.++|
T Consensus 1 ~v~~iG~~~vD~~~~v~--------------------~~p~~~~~~~~~~~~~~~GG~a~NvA~~la~-l--G~~~~~~~ 57 (290)
T cd01939 1 AVLCVGLTVLDFITTVD--------------------KYPFEDSDQRTTNGRWQRGGNASNSCTVLRL-L--GLSCEFLG 57 (290)
T ss_pred CEEEEeeeeeEEEeeec--------------------CCCCCCcceEeeeeeEecCCCHHHHHHHHHH-c--CCceEEEE
Confidence 38999999999999998 5788887777778889999999999999998 4 59999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcceEEEE
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYI 163 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i 163 (341)
.+|+|++|+.+++.|++.||+++++. ..+..++.++++.+ +|+|+++...++...++.+++.. ..++++|++|+
T Consensus 58 ~vG~D~~g~~~~~~l~~~gId~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 133 (290)
T cd01939 58 VLSRGPVFESLLDDFQSRGIDISHCYRKDIDEPASSYIIRSRAGGRTTIVNDNNLPEVTYDDFSK----IDLTQYGWIHF 133 (290)
T ss_pred eecCCHHHHHHHHHHHHcCCceeeeeEcCCCCCeeEEEEEcCCCCeEEEEeCCCCCCCCHHHHhh----hhhccCCEEEE
Confidence 99999999999999999999999974 44444544555554 68887777666656666665553 34589999999
Q ss_pred eccccccCHHHHHHHHHHHHhcC-------CeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCC
Q 019402 164 AGFFLTVSPESIQMVAEHAAAKN-------KVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDN 236 (341)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~-------~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~ 236 (341)
++.. ++...++++.+++.+ +++++|+.... +.+.++++++|++++|++|++.+ + ..+
T Consensus 134 ~g~~----~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~------~~~~~~l~~~di~~~n~~~~~~~-~-----~~~ 197 (290)
T cd01939 134 EGRN----PDETLRMMQHIEEHNNRRPEIRITISVEVEKPR------EELLELAAYCDVVFVSKDWAQSR-G-----YKS 197 (290)
T ss_pred eccC----HHHHHHHHHHHHHhcCcCCCcceEEEEEeccCc------hhhhhHHhhCCEEEEEhHHHHhc-C-----cCC
Confidence 9853 345567777777766 57888875321 23558899999999999988764 3 123
Q ss_pred HHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeC-CeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCC-HHH
Q 019402 237 VEEIALKISQWPKASGTHKRITVITQGADPVVVAED-GKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKP-VED 314 (341)
Q Consensus 237 ~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~-~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~-~~~ 314 (341)
.+++++.+.. ...+++.+|||+|++|++++.+ ++.+++|+++. .+++|||||||+|.|||+|++++|++ +++
T Consensus 198 ~~~~~~~~~~----~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~--~~vvDt~GAGDsf~agfl~~l~~g~~~~~~ 271 (290)
T cd01939 198 PEECLRGEGP----RAKKAALLVCTWGDQGAGALGPDGEYVHSPAHKP--IRVVDTLGAGDTFNAAVIYALNKGPDDLSE 271 (290)
T ss_pred HHHHHHhhhh----hccCCcEEEEEcccCCeEEEcCCCCEEEecCCCC--CCcccCCCchHHHHHHHHHHHHcCCccHHH
Confidence 4454433211 2456889999999999999875 56777887643 26899999999999999999999995 999
Q ss_pred HHHHHHHHHhhhhhhccc
Q 019402 315 CVRTGCYAANVVIQRSGC 332 (341)
Q Consensus 315 a~~~A~~~aa~~v~~~g~ 332 (341)
|+++|+++|++++++.|.
T Consensus 272 a~~~a~a~aa~~i~~~G~ 289 (290)
T cd01939 272 ALDFGNRVASQKCTGVGF 289 (290)
T ss_pred HHHHHHHHHHHHHhhhcC
Confidence 999999999999999885
|
KHK can also phosphorylate several other furanose sugars. It is found in higher eukaryotes where it is believed to function as a dimer and requires K(+) and ATP to be active. In humans, hepatic KHK deficiency causes fructosuria, a benign inborn error of metabolism. |
| >TIGR03828 pfkB 1-phosphofructokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-42 Score=308.50 Aligned_cols=289 Identities=18% Similarity=0.203 Sum_probs=231.5
Q ss_pred EEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEEee
Q 019402 8 LGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCI 87 (341)
Q Consensus 8 ~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~~v 87 (341)
+|.=++++|++..++ ++| +++.....+...++||.+.|+|.++++ + |.++.++|.+
T Consensus 3 ~~~~~~~~D~~~~~~--------------------~~~-~g~~~~~~~~~~~~GG~~~NvA~~la~-l--G~~v~~is~v 58 (304)
T TIGR03828 3 TVTLNPAIDLTIELD--------------------GLT-LGEVNRVESTRIDAGGKGINVSRVLKN-L--GVDVVALGFL 58 (304)
T ss_pred EEEcchHHeEEEEcc--------------------ccc-cCceeecccccccCCccHHHHHHHHHH-c--CCCeEEEEEe
Confidence 355678999999998 678 888888899999999999999999998 4 5999999999
Q ss_pred cCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEe-CCeeceeecccccccCCcccCCC--chhHhhhhcceEEEEe
Q 019402 88 GKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKR--PEIWSIVEKAKYYYIA 164 (341)
Q Consensus 88 G~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~i~ 164 (341)
|+| +|+.+++.|++.||++++++.. .+|+.++++.+ +|+++.+...++ .++++.+.. ....+.+++++++|++
T Consensus 59 G~D-~g~~~~~~L~~~gId~~~~~~~-~~t~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~v~~~ 134 (304)
T TIGR03828 59 GGF-TGDFIEALLREEGIKTDFVRVP-GETRINVKIKEPSGTETKLNGPGP--EISEEELEALLEKLRAQLAEGDWLVLS 134 (304)
T ss_pred cCc-hhHHHHHHHHHCCCcceEEECC-CCCeeeEEEEeCCCCEEEEECCCC--CCCHHHHHHHHHHHHHhccCCCEEEEE
Confidence 999 6999999999999999998654 35777777776 576665544432 344333322 0112357899999999
Q ss_pred cccc-ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHHH
Q 019402 165 GFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALK 243 (341)
Q Consensus 165 ~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~ 243 (341)
++.. ..+++.+..+++.+++.+.++++|+..... ...+....|++++|++|++.+++....+.++..++++.
T Consensus 135 g~~~~~~~~~~~~~~~~~~~~~~~~v~~D~~~~~~-------~~~~~~~~~i~~~n~~E~~~l~g~~~~~~~~~~~~~~~ 207 (304)
T TIGR03828 135 GSLPPGVPPDFYAELIALAREKGAKVILDTSGEAL-------RDGLKAKPFLIKPNDEELEELFGRELKTLEEIIEAARE 207 (304)
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCEEEEECChHHH-------HHHHhcCCcEECcCHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 8754 356788999999999999999999975421 11223457899999999999987543333455566777
Q ss_pred HhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHHHH
Q 019402 244 ISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAA 323 (341)
Q Consensus 244 l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~a 323 (341)
+ ...+++.||||+|++|++++++++.++++++++ +++|||||||+|+|||+++|++|+++++|+++|+++|
T Consensus 208 l------~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~~---~vvDttGAGDaF~a~~l~~l~~g~~~~~a~~~a~~~A 278 (304)
T TIGR03828 208 L------LDLGAENVLISLGADGALLVTKEGALFAQPPKG---EVVSTVGAGDSMVAGFLAGLESGLSLEEALRLAVAAG 278 (304)
T ss_pred H------HHcCCCEEEEccCCCCcEEEcCCceEEEeCCCc---cccCCcChHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 7 456788999999999999998887777776544 7899999999999999999999999999999999999
Q ss_pred hhhhhhccccCCCCCCC
Q 019402 324 NVVIQRSGCTYPPKPEF 340 (341)
Q Consensus 324 a~~v~~~g~~~p~~~e~ 340 (341)
+.+|++.|+.+|+++|+
T Consensus 279 a~~~~~~G~~~p~~~~~ 295 (304)
T TIGR03828 279 SAAAFSEGTGLPDPEDI 295 (304)
T ss_pred HHHhcCcCCCCCCHHHH
Confidence 99999999988887664
|
This enzyme acts in concert with the fructose-specific phosphotransferase system (PTS) which imports fructose as fructose-1-phosphate. The action of 1-phosphofructokinase results in beta-D-fructose-1,6-bisphosphate and is an entry point into glycolysis (GenProp0688). |
| >cd01940 Fructoselysine_kinase_like Fructoselysine kinase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-41 Score=298.27 Aligned_cols=261 Identities=17% Similarity=0.280 Sum_probs=212.3
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
||+++|++++|++... ...++||++.|+|.++++ + |.++.++|
T Consensus 1 ~v~~iG~~~~D~~~~~----------------------------------~~~~~GG~~~Nva~~la~-l--G~~~~~~~ 43 (264)
T cd01940 1 RLAAIGDNVVDKYLHL----------------------------------GKMYPGGNALNVAVYAKR-L--GHESAYIG 43 (264)
T ss_pred CeEEEcceEEEEeccC----------------------------------ceecCCCcHHHHHHHHHH-c--CCCeeEEe
Confidence 6899999999999621 357899999999999998 4 59999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecc-cccccCCcccCCCchhHhhhhcceEEEEe
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANL-SAANCYKSEHLKRPEIWSIVEKAKYYYIA 164 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~i~ 164 (341)
.+|+|.+|+.+++.|++.||++++++..+.+|+.+++...+|+|++..+. ++.....+.. ...+.++++|++|++
T Consensus 44 ~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~g~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~~v~~~ 119 (264)
T cd01940 44 AVGNDDAGAHVRSTLKRLGVDISHCRVKEGENAVADVELVDGDRIFGLSNKGGVAREHPFE----ADLEYLSQFDLVHTG 119 (264)
T ss_pred cccCchhHHHHHHHHHHcCCChhheEEcCCCCceEEEEecCCceEEEeecCCcHHhcccCc----ccHhHHhcCCEEEEc
Confidence 99999999999999999999999986555678888765557888765542 3222222221 123567899999998
Q ss_pred ccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHHHH
Q 019402 165 GFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKI 244 (341)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l 244 (341)
+... .+.+.++++.+++.++++++|++... ..+.+.++++++|++++|++|.. ..+.+++++.+
T Consensus 120 ~~~~---~~~~~~~~~~a~~~g~~v~~D~~~~~----~~~~~~~~~~~~d~~~~~~~~~~---------~~~~~~~~~~l 183 (264)
T cd01940 120 IYSH---EGHLEKALQALVGAGALISFDFSDRW----DDDYLQLVCPYVDFAFFSASDLS---------DEEVKAKLKEA 183 (264)
T ss_pred cccc---HHHHHHHHHHHHHcCCEEEEcCcccC----CHHHHHhhcccCCEEEechhhcC---------cchHHHHHHHH
Confidence 7532 56788999999999999999997542 12336678999999999987742 23456667777
Q ss_pred hcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCC-HHHHHHHHHHHH
Q 019402 245 SQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKP-VEDCVRTGCYAA 323 (341)
Q Consensus 245 ~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~-~~~a~~~A~~~a 323 (341)
...+++.+|||+|++|++++.+++.+++|++++ +++|||||||+|+|||++++++|++ +++|+++|+++|
T Consensus 184 ------~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~~---~~vDttGAGDaf~ag~i~~l~~g~~~~~~al~~a~~~a 254 (264)
T cd01940 184 ------VSRGAKLVIVTRGEDGAIAYDGAVFYSVAPRPV---EVVDTLGAGDSFIAGFLLSLLAGGTAIAEAMRQGAQFA 254 (264)
T ss_pred ------HHcCCCEEEEEECCCCeEEEeCCeEEecCCcCC---CCCCCCCchHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 456788999999999999999888888886654 8899999999999999999999999 999999999999
Q ss_pred hhhhhhccc
Q 019402 324 NVVIQRSGC 332 (341)
Q Consensus 324 a~~v~~~g~ 332 (341)
+.++++.|+
T Consensus 255 a~~~~~~G~ 263 (264)
T cd01940 255 AKTCGHEGA 263 (264)
T ss_pred HHHhcccCC
Confidence 999999986
|
Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown. |
| >TIGR02198 rfaE_dom_I rfaE bifunctional protein, domain I | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=308.26 Aligned_cols=298 Identities=18% Similarity=0.213 Sum_probs=224.4
Q ss_pred CcceEEEecCceeeeEee--cCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCc
Q 019402 3 YEGILLGMGNPLLDISAV--VDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGA 80 (341)
Q Consensus 3 ~~~~i~~iG~~~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~ 80 (341)
+.++|+++|+.++|++.. ++. +.+ ..|.+ ..........+|| +.|+|.++++ + |.+
T Consensus 6 ~~~~il~iG~~~iD~~~~~~~~~--------------~~~--~~~~~--~~~~~~~~~~~GG-a~NvA~~l~~-l--g~~ 63 (315)
T TIGR02198 6 KGAKVLVVGDVMLDRYWYGKVSR--------------ISP--EAPVP--VVKVEREEDRLGG-AANVARNIAS-L--GAR 63 (315)
T ss_pred CCCcEEEECceeEeeeeeecccc--------------cCC--CCCCc--eEEEEEEEecCcH-HHHHHHHHHh-c--CCc
Confidence 367999999999999986 321 000 11221 2233455678899 8999999998 4 599
Q ss_pred eEEEEeecCCchhHHHHHHHHhcCCceeEe-ecCCCCcceEEEEEeCCeeceeecccccccCCcccCCC--chhHhhhhc
Q 019402 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKYY-EDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKR--PEIWSIVEK 157 (341)
Q Consensus 81 v~li~~vG~D~~g~~i~~~l~~~gi~~~~~-~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 157 (341)
+.++|.+|+|.+|+++++.|++.||+++++ +..+.+|+.++.+.+++.............++...... ....+.+++
T Consensus 64 v~~i~~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 143 (315)
T TIGR02198 64 VFLVGVVGDDEAGKRLEALLAEEGIDTSGLIRDKDRPTTTKTRVLARNQQLLRVDFEERDPINAELEARLLAAIREQLAS 143 (315)
T ss_pred eEEEEEEecchhHHHHHHHHHHCCCCcceEEECCCCCcceEEEEEcCCeEEEEecCCCCCCCCHHHHHHHHHHHHhhhhh
Confidence 999999999999999999999999999987 45667888888777643222222222111233211111 112355889
Q ss_pred ceEEEEeccc-cccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCC
Q 019402 158 AKYYYIAGFF-LTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDN 236 (341)
Q Consensus 158 ~~~v~i~~~~-~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~ 236 (341)
+|+++++++. ..++++.+..+++.+++.++++++|+.+.. ...++++|++++|++|++.+++. ..+.++
T Consensus 144 ~~~v~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~---------~~~~~~~d~l~~n~~E~~~l~~~-~~~~~~ 213 (315)
T TIGR02198 144 ADAVVLSDYAKGVLTPRVVQEVIAAARKHGKPVLVDPKGKD---------FSRYRGATLITPNRKEAEAAVGA-CDTEAE 213 (315)
T ss_pred CCEEEEecCCCCccCHHHHHHHHHHHHhcCCCEEEeCCCcc---------hhhcCCCcEECCCHHHHHHHhCC-CCCHHH
Confidence 9999998764 245778899999999999999999997542 13477899999999999999872 222344
Q ss_pred HHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeC-CeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHH
Q 019402 237 VEEIALKISQWPKASGTHKRITVITQGADPVVVAED-GKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDC 315 (341)
Q Consensus 237 ~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~-~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a 315 (341)
.+++++.+. ...|++.+|||+|++|++++.+ +..+++|++++ +++||+||||+|.|||++++++|+++++|
T Consensus 214 ~~~~~~~l~-----~~~g~~~vivT~G~~G~~~~~~~~~~~~~~~~~~---~vvdt~GAGDaf~ag~~~~l~~g~~~~~a 285 (315)
T TIGR02198 214 LVQAAEKLL-----EELDLEALLVTRSEKGMTLFTREGEPIHIPAQAR---EVYDVTGAGDTVIATLALALAAGASLEEA 285 (315)
T ss_pred HHHHHHHHH-----HHcCCCEEEEEcCCCCeEEEecCCCeEEecCCCC---CCCCCcCccHHHHHHHHHHHHcCCCHHHH
Confidence 556666652 1357899999999999999874 56778876654 88999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhccccCCCCCCC
Q 019402 316 VRTGCYAANVVIQRSGCTYPPKPEF 340 (341)
Q Consensus 316 ~~~A~~~aa~~v~~~g~~~p~~~e~ 340 (341)
+++|+++|+++|++.|+..++.+|+
T Consensus 286 l~~A~~~aa~~~~~~G~~~~~~~~~ 310 (315)
T TIGR02198 286 CRLANAAAGVVVGKLGTATVSPAEL 310 (315)
T ss_pred HHHHHHHhhhhhccCCCCCCCHHHH
Confidence 9999999999999999987766554
|
RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in E. coli, and separate proteins in some other genome. The longer, N-terminal domain I (this family) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (TIGR02199) adds ADP to yield ADP-D-glycero-D-manno-heptose. |
| >PLN02543 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=317.95 Aligned_cols=313 Identities=16% Similarity=0.189 Sum_probs=228.4
Q ss_pred cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEE
Q 019402 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~l 83 (341)
++.|+|+|++.+|++...... +. ++..+...+-++ -.+........+||.+.|+|+++++ ||.++.+
T Consensus 125 ~~~v~~~Ge~liDf~~~~~~~-~~--~~~~~~~~~~~~-------~~~~~~~f~~~~GGa~aNVAvaLAR---LG~~vaf 191 (496)
T PLN02543 125 PPLVCCFGAVQKEFVPTVRVH-DN--QMHPDMYSQWKM-------LQWDPPEFARAPGGPPSNVAISHVR---LGGRAAF 191 (496)
T ss_pred CCeEEEeChhhhhhcCCCccc-cc--cccccccccccc-------ccccCCeeEeccCcHHHHHHHHHHH---CCCCEEE
Confidence 356999999999999853210 00 000000000000 0112456788999999999999998 4599999
Q ss_pred EEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe--CCeecee--ecccccccCCcccCCCchhHhhhhcc
Q 019402 84 IGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV--GGERSLV--ANLSAANCYKSEHLKRPEIWSIVEKA 158 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~--~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (341)
+|.||+|.+|+++++.|++.||+++++. ..+.+|+.+++.++ ++.+.+. ...+++..+.+++++. ..+.++
T Consensus 192 IG~VGdD~fG~~l~~~L~~~GVDts~v~~~~~~~Tgla~V~v~~~~~gr~~~~~~~~gA~~~L~~~di~~----~~l~~a 267 (496)
T PLN02543 192 MGKVGDDDFGEELVLMMNKERVQTRAVKFDENAKTACSRMKIKFRDGGKMVAETVKEAAEDSLLASELNL----AVLKEA 267 (496)
T ss_pred EEEeCCCHHHHHHHHHHHHcCCcccceEecCCCCCceEEEEEEeCCCCCEEEEecCCCHHHhCChhhcCH----hHhCCC
Confidence 9999999999999999999999999985 56678999988874 3335443 2345556777777664 568899
Q ss_pred eEEEEeccccccC--HHHHHHHHHHHHhcCCeEEEeCC--cHHHH--hhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCC
Q 019402 159 KYYYIAGFFLTVS--PESIQMVAEHAAAKNKVFMMNLS--APFIC--EFFREPQEKALPYMDYVFGNETEARTFAKVHGW 232 (341)
Q Consensus 159 ~~v~i~~~~~~~~--~~~~~~~~~~~~~~~~~v~~d~~--~~~~~--~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~ 232 (341)
+++|+++..+..+ .+....+++.+++.|+++++|+. .+.|. ....+.+.++++++|++++|++|++.|++....
T Consensus 268 ~ilh~~~~~l~~~~~~~a~~~al~~Ak~~G~~VsfDpN~R~~LW~~~~~~~~~i~~~l~~aDIl~~SeeEa~~Ltg~~~~ 347 (496)
T PLN02543 268 RMFHFNSEVLTSPSMQSTLFRAIELSKKFGGLIFFDLNLPLPLWRSRDETRELIKKAWNEADIIEVSRQELEFLLDEDYY 347 (496)
T ss_pred ceEEECChhhcCchHHHHHHHHHHHHHHCCCEEEEeCCCCccccCCHHHHHHHHHHHHHhCCEEEecHHHHHHHhCCCcc
Confidence 9999998764222 37888999999999999999985 34553 224556788999999999999999999863210
Q ss_pred ------CC------------------CCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecc---cCCC
Q 019402 233 ------ET------------------DNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVI---LLPK 285 (341)
Q Consensus 233 ------~~------------------~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~---~~~~ 285 (341)
+. .+.+.+ ..+ ...+++.||||+|++|+++++++..-.++.. .++
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l------~~~g~~~VVVT~G~~Ga~~~t~~~~g~v~~~~~~~v~- 419 (496)
T PLN02543 348 ERKRNYPPQYYAESFEQTKNWRDYYHYTPEEI-APL------WHDGLKLLLVTDGTLRIHYYTPKFDGVVVGTEDVLIT- 419 (496)
T ss_pred cccccccchhhhhhhhhhhcccccccCCHHHH-HHH------HHCCCCEEEEEcCCCcEEEEECCCcccccccccccCC-
Confidence 00 123333 344 3457899999999999999976422222111 111
Q ss_pred CcccCCCCcchhhHHHHHHHHhc-------CCCHHHHHHHHHHHHhhhhhhccc--cCCCCCCCC
Q 019402 286 EKLVDTNGAGDAFVGGFLSQLVQ-------EKPVEDCVRTGCYAANVVIQRSGC--TYPPKPEFN 341 (341)
Q Consensus 286 ~~vvdttGAGDaf~a~~~~~l~~-------g~~~~~a~~~A~~~aa~~v~~~g~--~~p~~~e~~ 341 (341)
..+||||||||+|+|||+++|++ ++++++|++||+++||++|++.|+ .+|+.+|++
T Consensus 420 ~~~VDTTGAGDAF~AGfL~~Ll~~~~~~~~g~~l~ealrfAnAaaAl~vt~~GA~~~lPt~~ev~ 484 (496)
T PLN02543 420 PFTCDRTGSGDAVVAAIMRKLTTCPEMFEDQDVLERQLRFAVAAGIISQWTIGAVRGFPTESATQ 484 (496)
T ss_pred CCCcCCCchHHHHHHHHHHHHHhccccccccccHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 13589999999999999999985 779999999999999999999998 578877653
|
|
| >cd01943 MAK32 MAK32 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=307.05 Aligned_cols=289 Identities=20% Similarity=0.169 Sum_probs=224.2
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCce--EE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGAT--SY 83 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v--~l 83 (341)
+++++|++++|.+...+. ......+||++.|+|+++++|++.+.++ .+
T Consensus 1 ~~~~~G~~~~d~i~~~~~------------------------------~~~~~~~GG~~~N~A~~~~~l~g~~~~~~~~~ 50 (328)
T cd01943 1 DFTTLGMFIIDEIEYPDS------------------------------EPVTNVLGGAGTYAILGARLFLPPPLSRSISW 50 (328)
T ss_pred CccccCcEEeeccccCCC------------------------------CccccccCCchhhHhhceeeecCCccccceee
Confidence 478999999999986541 4556789999999999998732322366 88
Q ss_pred EEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcceEEE
Q 019402 84 IGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYY 162 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 162 (341)
++.+|+| +|+++++.|++.||++++.+..+.+|+.++++++ +|+|.++...+++..+++++++. ..+..++++|
T Consensus 51 ~~~vG~D-~G~~l~~~L~~~GVd~~~~~~~~~~Tg~~~v~~~~~g~r~~~~~~~~~~~~~~~~l~~----~~~~~a~~~h 125 (328)
T cd01943 51 IVDKGSD-FPKSVEDELESWGTGMVFRRDPGRLTTRGLNIYDGNDRRFFKYLTPKKRIDVSDDLNS----TPLIRSSCIH 125 (328)
T ss_pred EEecCCC-CCHHHHHHHHhcCCceEEEeCCCCcchhhhhhcCCCCcceeeecCccccccccccccc----ccccCCCeEE
Confidence 9999999 9999999999999999985456778998888876 57777766667777777777764 4577899999
Q ss_pred EeccccccCHHHHHHHHHHHHh------cCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCC
Q 019402 163 IAGFFLTVSPESIQMVAEHAAA------KNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDN 236 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~~~~------~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~ 236 (341)
+++.... ..+...++++.+++ .+.++.+|+.........++.+.++++++|++++|++|+..+++....+...
T Consensus 126 l~~~~~~-~~~~~~~~~~~a~~~~~d~~~g~~~~~d~~~~~~~~~~~~~l~~~l~~~dil~~n~~Ea~~l~g~~~~~~~~ 204 (328)
T cd01943 126 LICSPER-CASIVDDIINLFKLLKGNSPTRPKIVWEPLPDSCDPENLEDLLQALPRVDVFSPNLEEAARLLGLPTSEPSS 204 (328)
T ss_pred EECCHHH-HHHHHHHHHHHHHhhccccCCccEEEEecCCcccChhhHHHHHHHhccCCEECCCHHHHHHHhCCCCCCccc
Confidence 9875321 22678888899888 7888989986432211123457899999999999999999998754332221
Q ss_pred HHHHH-----HHHhcCCCCCCCCccEEEEeeCCCCEEEEe--CCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcC
Q 019402 237 VEEIA-----LKISQWPKASGTHKRITVITQGADPVVVAE--DGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE 309 (341)
Q Consensus 237 ~~~~~-----~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~--~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g 309 (341)
.++.. ..+..+ ...+++.||||+|++|+++++ +++.+++|++++++.+++|||||||+|+|||+++|++|
T Consensus 205 ~~~~~~~~~~~~~~~~---~~~g~~~vvvt~G~~Ga~~~~~~~~~~~~~p~~~v~~~~vvDttGAGDaF~agfl~~l~~g 281 (328)
T cd01943 205 DEEKEAVLQALLFSGI---LQDPGGGVVLRCGKLGCYVGSADSGPELWLPAYHTKSTKVVDPTGGGNSFLGGFAAGLALT 281 (328)
T ss_pred hhhhhhhHHHHHHHhh---hccCCCEEEEEeCCCCCEEEecCCCceEecCCccCCCCcccCCCCchHHHHHHHHHHHHcC
Confidence 22211 111111 245788999999999999987 45677888776545589999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhhhhhcccc
Q 019402 310 KPVEDCVRTGCYAANVVIQRSGCT 333 (341)
Q Consensus 310 ~~~~~a~~~A~~~aa~~v~~~g~~ 333 (341)
+++++|+++|+++|++++++.|..
T Consensus 282 ~~~~~al~~a~a~Aa~~v~~~G~~ 305 (328)
T cd01943 282 KSIDEACIYGSVAASFAIEQVGLP 305 (328)
T ss_pred CCHHHHHHHHHHHHHHHHccCCCC
Confidence 999999999999999999999963
|
MAK32 is a protein found primarily in fungi that is necessary for the structural stability of L-A particles. The L-A virus particule is a specialized compartment for the transcription and replication of double-stranded RNA, known to infect yeast and other fungi. MAK32 is part of the host machinery used by the virus to multiply. |
| >KOG2855 consensus Ribokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-41 Score=293.48 Aligned_cols=298 Identities=22% Similarity=0.319 Sum_probs=239.0
Q ss_pred CcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceE
Q 019402 3 YEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATS 82 (341)
Q Consensus 3 ~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~ 82 (341)
.++.|+|+|+..+|++...+ .+|..++..........+||.+.|+|++++| ||.++.
T Consensus 8 ~~~~vv~fGs~~~D~V~~~~--------------------~~p~~ge~~~~~~f~~~~GG~~aN~Avaaar---LG~~~a 64 (330)
T KOG2855|consen 8 EPPLVVVFGSMLIDFVPSTR--------------------RLPNAGETWEPPGFKTAPGGKGANQAVAAAR---LGGRVA 64 (330)
T ss_pred CCceEEEeccceeeeeeccc--------------------cCCCccccccCCcceecCCCcchhhhhHHHh---cCccee
Confidence 36689999999999999887 6899999999999999999999999999999 459999
Q ss_pred EEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcceE
Q 019402 83 YIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKY 160 (341)
Q Consensus 83 li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (341)
+||.||+|.||..+.+.|++++|+++++. ..+..|+.+++.+. +|++.+..+.+++....++..+ ...+.++++.+
T Consensus 65 fiGkvGdD~fG~~l~~~L~~~~V~~~~v~~~~~~~T~~a~i~v~~dG~~~~~~v~gan~~~~~~~se--~~~~~i~~ak~ 142 (330)
T KOG2855|consen 65 FIGKVGDDEFGDDLLDILKQNGVDTSGVKFDENARTACATITVSKDGENRIIFVRGANADMLPEDSE--LNLEVIKEAKV 142 (330)
T ss_pred eeecccchhhHHHHHHHHhhCCcccccceecCCCceEEEEEEEccCCceEEEEEecCchhcCccccc--ccHHHHhhccE
Confidence 99999999999999999999999999995 67888998888886 8999998888888877766532 35588999999
Q ss_pred EEEeccccccCHHHHHHH--HHHHHhcCCeEE--EeCCcHHHHhh--hhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCC
Q 019402 161 YYIAGFFLTVSPESIQMV--AEHAAAKNKVFM--MNLSAPFICEF--FREPQEKALPYMDYVFGNETEARTFAKVHGWET 234 (341)
Q Consensus 161 v~i~~~~~~~~~~~~~~~--~~~~~~~~~~v~--~d~~~~~~~~~--~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~ 234 (341)
+++....+.-.+....++ .+.+++.+..+. .++.-+.|... ++..+..++..+|++.++.+|+..+++.
T Consensus 143 ~~~q~ei~~~~~~~s~~~~~~~~~~~~g~~i~~~pn~~l~l~~~~~~ne~e~~~i~~~adv~~~s~~e~~fl~~~----- 217 (330)
T KOG2855|consen 143 FHCQSEILIEEPMRSLHIAAVKVAKNAGPAIFYDPNLRLPLWDSLEENESEIASIWNMADVIKVSSQELAFLTGI----- 217 (330)
T ss_pred EEEeeecCCcchhHHHHHhhhhhhhcccccccCCCCccccccccccccHHHHHHHhhhhhcccccHHHHHHhccC-----
Confidence 999876543333223333 335555554433 34444455432 4444777788888888888888888764
Q ss_pred CCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEE-EEecccCCCCcccCCCCcchhhHHHHHHHHhcC--CC
Q 019402 235 DNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVK-LFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE--KP 311 (341)
Q Consensus 235 ~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~-~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g--~~ 311 (341)
++ .+.. +| +..+.+.||||+|++||.||+++..- ++|++.+ ++||||||||+|+|||+.+|.+| .+
T Consensus 218 ~~-~~~~-~L------~~~~~k~viVTlG~kG~~y~tk~~~~~~v~~~~V---~~VDtTGAGDsFvgal~~~L~~~~~~~ 286 (330)
T KOG2855|consen 218 ED-DKIL-KL------WHMKLKLVIVTLGEKGCRYYTKDFKGSHVPAFKV---KAVDTTGAGDSFVGALAVQLVRGSLLP 286 (330)
T ss_pred cc-chHH-HH------hccCCCEEEEEeCCCceEEEecCCCCCCCCCccc---ccccCCCchHHHHHHHHHHHhhccccc
Confidence 11 1222 44 45566999999999999999887554 7777655 79999999999999999999999 66
Q ss_pred ---HHHHHHHHHHHHhhhhhhccc--cCCCCCCCC
Q 019402 312 ---VEDCVRTGCYAANVVIQRSGC--TYPPKPEFN 341 (341)
Q Consensus 312 ---~~~a~~~A~~~aa~~v~~~g~--~~p~~~e~~ 341 (341)
+++++++|+++++.++++.|+ .+|..++.|
T Consensus 287 ~~~L~~~l~~A~a~~ai~v~~~Ga~~s~p~~~~~~ 321 (330)
T KOG2855|consen 287 ELSLEEALRFANACGAITVQRKGAIPSMPTEKEVQ 321 (330)
T ss_pred hHHHHHHHHHHHHhhhHHhhccCCCccCccHHHHH
Confidence 999999999999999999999 688877654
|
|
| >PRK09513 fruK 1-phosphofructokinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-41 Score=302.36 Aligned_cols=295 Identities=18% Similarity=0.150 Sum_probs=233.2
Q ss_pred CCCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCc
Q 019402 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGA 80 (341)
Q Consensus 1 m~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~ 80 (341)
||.| -+++.=++++|++..++ ++| +++..+..+...++||++.|+|.++++ + |.+
T Consensus 1 ~~~~-~~~~~~~p~~D~~~~~~--------------------~~~-~~~~~~~~~~~~~~GG~~~Nva~~la~-l--G~~ 55 (312)
T PRK09513 1 MSRR-VATITLNPAYDLVGFCP--------------------EIE-RGEVNLVKTTGLHAAGKGINVAKVLKD-L--GID 55 (312)
T ss_pred CCce-EEEEecChHHeEEEEcC--------------------cee-cCCeeeecceeecCCchHHHHHHHHHH-c--CCC
Confidence 5543 45588899999999998 577 588888899999999999999999998 4 599
Q ss_pred eEEEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEe-CCeeceeecccccccCCcccCCC--chhHhhhhc
Q 019402 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKR--PEIWSIVEK 157 (341)
Q Consensus 81 v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 157 (341)
+.++|.+|+|.+|++ .+.|+++||++.+++.. .+|+.++.+.+ +|+++.+...+. .+++.+... ....+.+++
T Consensus 56 ~~~i~~vG~D~~~~~-~~~l~~~gv~~~~~~~~-~~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~ 131 (312)
T PRK09513 56 VTVGGFLGKDNQDGF-QQLFSELGIANRFQVVQ-GRTRINVKLTEKDGEVTDFNFSGF--EVTPADWERFVTDSLSWLGQ 131 (312)
T ss_pred eEEEEEecCccHHHH-HHHHHHcCCCccEEECC-CCCEEEEEEEeCCCcEEEEeCCCC--CCCHHHHHHHHHHHHhhcCC
Confidence 999999999999987 58899999998877554 36887777776 577765554331 233332221 012345789
Q ss_pred ceEEEEecccc-ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCC
Q 019402 158 AKYYYIAGFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDN 236 (341)
Q Consensus 158 ~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~ 236 (341)
+|++|+++... ..+.+.+..+++.+++.|.++++|++.... ...+....|++++|++|+..+++....+.++
T Consensus 132 ~d~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~-------~~~~~~~~~~l~~n~~E~~~l~g~~~~~~~~ 204 (312)
T PRK09513 132 FDMVAVSGSLPRGVSPEAFTDWMTRLRSQCPCIIFDSSREAL-------VAGLKAAPWLVKPNRRELEIWAGRKLPELKD 204 (312)
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHhcCCEEEEECChHHH-------HHHhccCCeEEcCCHHHHHHHhCCCCCCHHH
Confidence 99999998754 345678889999999999999999975321 2234457889999999999998754333344
Q ss_pred HHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHH
Q 019402 237 VEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCV 316 (341)
Q Consensus 237 ~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~ 316 (341)
..++++.+ ...+++.+|||+|++|++++.+++.++++++++ +++|||||||+|+|||++++++|+++++|+
T Consensus 205 ~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~---~~vDttGAGDaf~ag~i~~l~~g~~~~~a~ 275 (312)
T PRK09513 205 VIEAAHAL------REQGIAHVVISLGAEGALWVNASGEWIAKPPAC---DVVSTVGAGDSMVGGLIYGLLMRESSEHTL 275 (312)
T ss_pred HHHHHHHH------HHcCCCEEEEEeCCCCcEEEeCCceEEecCCCc---cccCCCChHHHHHHHHHHHHHcCCCHHHHH
Confidence 55677777 456789999999999999988877777776544 899999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhccccCCCCCCC
Q 019402 317 RTGCYAANVVIQRSGCTYPPKPEF 340 (341)
Q Consensus 317 ~~A~~~aa~~v~~~g~~~p~~~e~ 340 (341)
++|+++|++++++.|..+|+.+|+
T Consensus 276 ~~A~a~Aa~~~~~~~~~~~~~~e~ 299 (312)
T PRK09513 276 RLATAVSALAVSQSNVGITDRPQL 299 (312)
T ss_pred HHHHHHHHHHhhCCCCCCCCHHHH
Confidence 999999999999999888876654
|
|
| >cd01941 YeiC_kinase_like YeiC-like sugar kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=298.28 Aligned_cols=283 Identities=20% Similarity=0.273 Sum_probs=221.4
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
.|+++|++++|++..++ +.|.+++... ......+||+++|+|.++++ + |.++.++|
T Consensus 1 ~v~~~G~~~~D~~~~~~--------------------~~~~~~~~~~-~~~~~~~GG~~~Nva~~l~~-l--G~~~~~~~ 56 (288)
T cd01941 1 EIVVIGAANIDLRGKVS--------------------GSLVPGTSNP-GHVKQSPGGVGRNIAENLAR-L--GVSVALLS 56 (288)
T ss_pred CeEEEEeEEEeeeeccc--------------------CccccCCCCC-eeEEEccCcHHHHHHHHHHH-h--CCCcEEEE
Confidence 38999999999999887 3455554443 35678999999999999998 4 49999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEe-CCeecee-ecccccccCCcccCCCchhHhhhhcceEEEE
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV-GGERSLV-ANLSAANCYKSEHLKRPEIWSIVEKAKYYYI 163 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i 163 (341)
.+|+|++|+.+++.|++.||++.++...+.+|+.+++.++ +|++.+. ........++++.++ ...+.+.+++++++
T Consensus 57 ~lG~D~~g~~i~~~L~~~gI~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~v~~ 134 (288)
T cd01941 57 AVGDDSEGESILEESEKAGLNVRGIVFEGRSTASYTAILDKDGDLVVALADMDIYELLTPDFLR--KIREALKEAKPIVV 134 (288)
T ss_pred EEecCccHHHHHHHHHHcCCccceeeeCCCCcceEEEEECCCCCEEEEEechHhhhhCCHHHHH--HHHHHHhcCCEEEE
Confidence 9999999999999999999999988766678999888886 5777752 222222233332221 12356889999998
Q ss_pred eccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHHH
Q 019402 164 AGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALK 243 (341)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~ 243 (341)
++ ..+++.+..+++.+++.+.++++|+..... .++ +.++++++|++++|++|++.+++....+.....++++.
T Consensus 135 ~~---~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~---~~~-~~~~~~~~dii~~n~~E~~~~~~~~~~~~~~~~~~~~~ 207 (288)
T cd01941 135 DA---NLPEEALEYLLALAAKHGVPVAFEPTSAPK---LKK-LFYLLHAIDLLTPNRAELEALAGALIENNEDENKAAKI 207 (288)
T ss_pred eC---CCCHHHHHHHHHhhhhcCCcEEEEccchHH---hcc-chhhcccceEEeCCHHHHHHHhCcccCCchhHHHHHHH
Confidence 76 456678889999999999999999864321 111 12588999999999999999987543332333455566
Q ss_pred HhcCCCCCCCCccEEEEeeCCCCEEEEeC---CeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHH
Q 019402 244 ISQWPKASGTHKRITVITQGADPVVVAED---GKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGC 320 (341)
Q Consensus 244 l~~~~~~~~~~~~~vvvt~G~~G~~~~~~---~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~ 320 (341)
+ ...+++.+|+|+|++|++++.+ +..+++|++ ..++++|||||||+|.|||++++++|+++++|+++|+
T Consensus 208 ~------~~~~~~~vvit~G~~Ga~~~~~~~~~~~~~~~~~--~~~~~vDttGAGDaf~a~~~~~l~~g~~~~~al~~a~ 279 (288)
T cd01941 208 L------LLPGIKNVIVTLGAKGVLLSSREGGVETKLFPAP--QPETVVNVTGAGDAFVAGLVAGLLEGMSLDDSLRFAQ 279 (288)
T ss_pred H------HHcCCcEEEEEeCCCcEEEEecCCCceeEEecCC--CCccceeCCCcHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 6 5567899999999999999986 566788863 1348999999999999999999999999999999999
Q ss_pred HHHhhhhhh
Q 019402 321 YAANVVIQR 329 (341)
Q Consensus 321 ~~aa~~v~~ 329 (341)
++|+.+|+.
T Consensus 280 ~~Aa~~~~~ 288 (288)
T cd01941 280 AAAALTLES 288 (288)
T ss_pred HHHHHHhcC
Confidence 999999873
|
Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. |
| >PRK10294 6-phosphofructokinase 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=301.16 Aligned_cols=291 Identities=18% Similarity=0.186 Sum_probs=229.5
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
-+++.=++++|+++.++ +++ ++...++......+||+++|+|.++++ + |.++.+++
T Consensus 4 i~~~~~~p~~d~~~~~~--------------------~~~-~~~~~~~~~~~~~~GG~~~NvA~~l~~-l--G~~~~~i~ 59 (309)
T PRK10294 4 IYTLTLAPSLDSATITP--------------------QIY-PEGKLRCSAPVFEPGGGGINVARAIAH-L--GGSATAIF 59 (309)
T ss_pred EEEEecChHHeEEEEeC--------------------cee-eCCeEEeccceecCCccHHHHHHHHHH-c--CCCeEEEE
Confidence 67788999999999998 564 667778888899999999999999998 4 59999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCc-hhHhhhhcceEEEE
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRP-EIWSIVEKAKYYYI 163 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i 163 (341)
.+|+ .+|+.+++.|++.||++.++...+..++.+++..+ +|++.++...++ .++.++++.. +..+.+++++++++
T Consensus 60 ~vG~-~~g~~i~~~l~~~gv~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~i 136 (309)
T PRK10294 60 PAGG-ATGEHLVSLLADENVPVATVEAKDWTRQNLHVHVEASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIESGAILVI 136 (309)
T ss_pred EecC-ccHHHHHHHHHHcCCCceEEECCCCCeeeEEEEEcCCCcEEEEECCCC--CCCHHHHHHHHHHHHhcCCCCEEEE
Confidence 9996 79999999999999999999654444444444555 577665554442 2444433321 11234678999999
Q ss_pred ecccc-ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHH
Q 019402 164 AGFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIAL 242 (341)
Q Consensus 164 ~~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~ 242 (341)
+++.+ ..+.+.+.++++.+++.|.++++|+..... ++. ..++++|++++|++|+..+++....+.++++++++
T Consensus 137 ~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~----~~~--~~~~~~~~i~~n~~E~~~l~g~~~~~~~~~~~a~~ 210 (309)
T PRK10294 137 SGSLPPGVKLEKLTQLISAAQKQGIRCIIDSSGDAL----SAA--LAIGNIELVKPNQKELSALVNRDLTQPDDVRKAAQ 210 (309)
T ss_pred eCCCCCCCCHHHHHHHHHHHHHcCCeEEEeCCCHHH----HHH--HhcCCCeEECCCHHHHHHHhCCCCCCHHHHHHHHH
Confidence 98754 345688999999999999999999975421 111 12568999999999999998755444445667777
Q ss_pred HHhcCCCCCCCC-ccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHH
Q 019402 243 KISQWPKASGTH-KRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCY 321 (341)
Q Consensus 243 ~l~~~~~~~~~~-~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~ 321 (341)
.+ ++.+ ++.+|||+|++|++++++++.++++++++ +++|||||||+|+|||+++|++|+++++|+++|++
T Consensus 211 ~l------~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaf~ag~l~~l~~g~~~~~al~~a~a 281 (309)
T PRK10294 211 EL------VNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPV---KSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVA 281 (309)
T ss_pred HH------HHcCCCCEEEEecCCCceEEEcCCccEEEeCCCc---ccCCCcchHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 77 4444 78999999999999998877777886654 78999999999999999999999999999999999
Q ss_pred HHhhhhhhccccCCCCC
Q 019402 322 AANVVIQRSGCTYPPKP 338 (341)
Q Consensus 322 ~aa~~v~~~g~~~p~~~ 338 (341)
+|+++|++.|++.+..+
T Consensus 282 ~aa~~v~~~G~~~~~~~ 298 (309)
T PRK10294 282 AGSAATLNQGTRLCSHD 298 (309)
T ss_pred HHHHHhcCCCCCCCCHH
Confidence 99999999999765543
|
|
| >PRK13508 tagatose-6-phosphate kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-40 Score=297.38 Aligned_cols=288 Identities=16% Similarity=0.180 Sum_probs=223.2
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
-+++..++++|++..++ ++|..+ ..........+||.+.|+|.++++ ||.++.++|
T Consensus 2 ~~~~t~np~~D~~~~~~--------------------~~~~~~-~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~~~ 57 (309)
T PRK13508 2 ILTVTLNPSIDISYPLD--------------------ELKLDT-VNRVVDVSKTAGGKGLNVTRVLSE---FGENVLATG 57 (309)
T ss_pred EEEEecChHHeEEEEeC--------------------CeeeCC-eEEecceeecCCchHHHHHHHHHH---cCCCeEEEE
Confidence 46788999999999998 454443 445567889999999999999998 459999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCC--chhHhhhhcceEEEE
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKR--PEIWSIVEKAKYYYI 163 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~i 163 (341)
.+|+ .+|+.+++.|++ ||++++++.. .+|+.+.+++++|+++++...++ .++.+.... ....+.+.++|++|+
T Consensus 58 ~vGd-~~G~~i~~~l~~-gI~~~~~~~~-~~t~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~ 132 (309)
T PRK13508 58 LIGG-ELGQFIAEHLDD-QIKHAFYKIK-GETRNCIAILHEGQQTEILEKGP--EISVQEADGFLHHFKQLLESVEVVAI 132 (309)
T ss_pred EecC-hhHHHHHHHHHc-CCCceEEECC-CCCeeeEEEEeCCCEEEEECCCC--CCCHHHHHHHHHHHHHhccCCCEEEE
Confidence 9996 689999999999 9999987654 35777777777788877665543 233322211 112345789999999
Q ss_pred eccccc-cCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCC-CCCCHHHHH
Q 019402 164 AGFFLT-VSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGW-ETDNVEEIA 241 (341)
Q Consensus 164 ~~~~~~-~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~-~~~~~~~~~ 241 (341)
+++... .+.+.+..+++.+++.|+++++|+..... +.+...++++|++++|++|+..+++.... +.++..+++
T Consensus 133 ~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~-----~~~~~~~~~~dii~~n~~E~~~l~g~~~~~~~~~~~~~~ 207 (309)
T PRK13508 133 SGSLPAGLPVDYYAQLIELANQAGKPVVLDCSGAAL-----QAVLESPYKPTVIKPNIEELSQLLGKEVSEDLDELKEVL 207 (309)
T ss_pred eCCCCCCcCHHHHHHHHHHHHHCCCEEEEECCcHHH-----HHHHhccCCceEEccCHHHHHHHhCCCCCCCHHHHHHHH
Confidence 986542 24567888999999999999999975421 22334467899999999999999874321 112233444
Q ss_pred HHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHH
Q 019402 242 LKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCY 321 (341)
Q Consensus 242 ~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~ 321 (341)
+.+ ...|++.||||+|++|++++.+++.++++++++ +++|||||||+|+|||+++|++|+++++|+++|++
T Consensus 208 ~~~------~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~Agfi~~l~~g~~~~~al~~a~a 278 (309)
T PRK13508 208 QQP------LFEGIEWIIVSLGADGAFAKHNDTFYKVDIPKI---EVVNPVGSGDSTVAGIASGLLHQEDDADLLKKANV 278 (309)
T ss_pred HHH------HHcCCCEEEEecCCCceEEEeCCceEEEeCCCc---cccCCcChhHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 444 345789999999999999998888888887655 88999999999999999999999999999999999
Q ss_pred HHhhhhhhccccCCC
Q 019402 322 AANVVIQRSGCTYPP 336 (341)
Q Consensus 322 ~aa~~v~~~g~~~p~ 336 (341)
+|++++++.+....+
T Consensus 279 ~aa~~~~~~~~~~~~ 293 (309)
T PRK13508 279 LGMLNAQEKQTGHVN 293 (309)
T ss_pred HHHHHhcCcCcCCCC
Confidence 999999999885443
|
|
| >cd01164 FruK_PfkB_like 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-40 Score=293.85 Aligned_cols=282 Identities=20% Similarity=0.199 Sum_probs=225.3
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
-..++|++++|++..++ ++| .++..+..+....+||.++|+|.+|++ + |.++.++|
T Consensus 2 ~~~~~~~~~~D~~~~~~--------------------~~~-~~~~~~~~~~~~~~GG~~~Nva~~la~-l--G~~v~~is 57 (289)
T cd01164 2 IYTVTLNPAIDLTIELD--------------------QLQ-PGEVNRVSSTRKDAGGKGINVARVLKD-L--GVEVTALG 57 (289)
T ss_pred EEEEecChHHeEEEEcC--------------------ccc-CCceeecccccccCCcchhHHHHHHHH-c--CCCeEEEE
Confidence 36899999999999998 555 457778888999999999999999998 4 59999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeC-CeeceeecccccccCCcccCCC--chhHhhhhcceEEE
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVG-GERSLVANLSAANCYKSEHLKR--PEIWSIVEKAKYYY 162 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~ 162 (341)
.+|+| +|+.+++.|++.||++.+++.. .+|+..++..+. |+++.+...+ ..++++++.. ....+.++++|++|
T Consensus 58 ~vG~D-~g~~i~~~l~~~gi~~~~~~~~-~~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (289)
T cd01164 58 FLGGF-TGDFFEALLKEEGIPDDFVEVA-GETRINVKIKEEDGTETEINEPG--PEISEEELEALLEKLKALLKKGDIVV 133 (289)
T ss_pred EccCc-hhHHHHHHHHHcCCCceEEECC-CCCEEEEEEEeCCCCEEEEeCCC--CCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 99998 8999999999999999998643 456777666663 5555544332 2344443322 01113467899999
Q ss_pred Eecccc-ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhC-CCCcEEEcCHHHHHHHHhhcCCCCCCHHHH
Q 019402 163 IAGFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKAL-PYMDYVFGNETEARTFAKVHGWETDNVEEI 240 (341)
Q Consensus 163 i~~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l-~~~dil~~n~~E~~~l~~~~~~~~~~~~~~ 240 (341)
+++..+ ..+.+....+++.+++.+.++++|+.... +.+.+ +++|++++|++|+..+++....+.++..++
T Consensus 134 i~g~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~--------~~~~~~~~~dil~~n~~E~~~l~~~~~~~~~~~~~~ 205 (289)
T cd01164 134 LSGSLPPGVPADFYAELVRLAREKGARVILDTSGEA--------LLAALAAKPFLIKPNREELEELFGRPLGDEEDVIAA 205 (289)
T ss_pred EeCCCCCCcCHHHHHHHHHHHHHcCCeEEEECChHH--------HHHHHhcCCcEECCCHHHHHHHhCCCCCCHHHHHHH
Confidence 988643 23457888999999999999999996532 22333 799999999999999987554444556777
Q ss_pred HHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHH
Q 019402 241 ALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGC 320 (341)
Q Consensus 241 ~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~ 320 (341)
++.+ ...+++.++||+|++|++++.+++.++++++++ +++||+||||+|+|||++++++|+++++|+++|+
T Consensus 206 ~~~l------~~~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~---~vvDttGAGDaf~a~~i~~l~~g~~~~~a~~~A~ 276 (289)
T cd01164 206 ARKL------IERGAENVLVSLGADGALLVTKDGVYRASPPKV---KVVSTVGAGDSMVAGFVAGLAQGLSLEEALRLAV 276 (289)
T ss_pred HHHH------HHcCCCEEEEecCCCCCEEEcCCcEEEecCCCc---cccCCCChHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 7777 456788999999999999998877778776654 7899999999999999999999999999999999
Q ss_pred HHHhhhhhhccc
Q 019402 321 YAANVVIQRSGC 332 (341)
Q Consensus 321 ~~aa~~v~~~g~ 332 (341)
++|+.+|++.|+
T Consensus 277 ~~Aa~~~~~~G~ 288 (289)
T cd01164 277 AAGSATAFSPGT 288 (289)
T ss_pred HHHHHHhcCccC
Confidence 999999999986
|
FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis. |
| >TIGR03168 1-PFK hexose kinase, 1-phosphofructokinase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-40 Score=296.25 Aligned_cols=289 Identities=19% Similarity=0.206 Sum_probs=229.2
Q ss_pred EEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEEee
Q 019402 8 LGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCI 87 (341)
Q Consensus 8 ~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~~v 87 (341)
.|-=++.+|++..+| + +..++.....+...++||.+.|+|.++++ + |.++.++|.+
T Consensus 3 ~~~~~~~~D~~~~~~--------------------~-~~~~~~~~~~~~~~~~GG~~~N~a~~l~~-l--g~~~~~i~~v 58 (303)
T TIGR03168 3 TVTLNPAIDLTIEVD--------------------G-LTPGEVNRVAAVRKDAGGKGINVARVLAR-L--GAEVVATGFL 58 (303)
T ss_pred EEEcchHHeEEEEcC--------------------c-cccCceeecCcccccCCcchhhHHHHHHH-c--CCCeEEEEEe
Confidence 445577899999887 3 35567777788899999999999999998 4 5999999999
Q ss_pred cCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCc--hhHhhhhcceEEEEe
Q 019402 88 GKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRP--EIWSIVEKAKYYYIA 164 (341)
Q Consensus 88 G~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~i~ 164 (341)
|+| +|+.+++.|++.||++.+++.. ..|+.++...+ +|++..+...+ ..++++++... ...+.++++|++|++
T Consensus 59 G~D-~g~~i~~~l~~~gI~~~~i~~~-~~t~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~i~ 134 (303)
T TIGR03168 59 GGF-TGEFIEALLAEEGIKNDFVEVK-GETRINVKIKESSGEETELNEPG--PEISEEELEQLLEKLRELLASGDIVVIS 134 (303)
T ss_pred CCc-hhHHHHHHHHHcCCCceEEECC-CCCEEeEEEEeCCCCEEEEeCcC--CCCCHHHHHHHHHHHHHhccCCCEEEEe
Confidence 998 7999999999999999998754 35666666665 46655444433 23554444321 111347899999998
Q ss_pred cccc-ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHHH
Q 019402 165 GFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALK 243 (341)
Q Consensus 165 ~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~ 243 (341)
++.. ..+.+.+..+++.+++.|+++++|+..... .+.+..++|++++|++|+..+++....+.++..++++.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~g~~v~~D~~~~~~-------~~~~~~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~ 207 (303)
T TIGR03168 135 GSLPPGVPPDFYAQLIAIARKRGAKVILDTSGEAL-------REALAAKPFLIKPNHEELEELFGRELKTEEEIIEAARE 207 (303)
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCEEEEECCcHHH-------HHHHhcCCcEECCCHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 8642 456788999999999999999999975421 12233579999999999999988654333455667777
Q ss_pred HhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHHHH
Q 019402 244 ISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAA 323 (341)
Q Consensus 244 l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~a 323 (341)
+ ...+++.+|||+|++|++++++++.+++|++++ +++||+||||+|+|+|++++++|+++++|+++|+++|
T Consensus 208 l------~~~g~~~vviT~g~~G~~~~~~~~~~~~~~~~~---~~vDttGAGD~F~a~~~~~l~~g~~i~~a~~~A~~~a 278 (303)
T TIGR03168 208 L------LDRGAENVLVSLGADGALLVTKEGALKATPPKV---EVVNTVGAGDSMVAGFLAGLARGLSLEEALRFAVAAG 278 (303)
T ss_pred H------HHcCCCEEEEeecCCCcEEEeCCceEEeeCCcc---eeecCcCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 7 456788999999999999998888888887654 7899999999999999999999999999999999999
Q ss_pred hhhhhhccccCCCCCCC
Q 019402 324 NVVIQRSGCTYPPKPEF 340 (341)
Q Consensus 324 a~~v~~~g~~~p~~~e~ 340 (341)
+.+|++.|+..|+.+|+
T Consensus 279 a~~~~~~G~~~~~~~~~ 295 (303)
T TIGR03168 279 SAAAFSPGTGLPDPEDV 295 (303)
T ss_pred HHHhcCCCcCCCCHHHH
Confidence 99999999987877654
|
This family consists largely of 1-phosphofructokinases, but also includes tagatose-6-kinases and 6-phosphofructokinases. |
| >PRK09813 fructoselysine 6-kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-40 Score=288.68 Aligned_cols=257 Identities=18% Similarity=0.242 Sum_probs=207.4
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
+|+++|++++|++.+.+ +.++||.+.|+|.+|++ + |.++.++|
T Consensus 2 ~v~~iG~~~~D~~~~~~----------------------------------~~~~GG~~~NvA~~l~~-l--G~~~~~is 44 (260)
T PRK09813 2 KLATIGDNCVDIYPQLG----------------------------------KAFSGGNAVNVAVYCTR-Y--GIQPGCIT 44 (260)
T ss_pred eEEEeccceeeecccCC----------------------------------ccccCccHHHHHHHHHH-c--CCcceEEE
Confidence 79999999999997443 26999999999999998 4 59999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecc-cccccCCcccCCCchhHhhhhcceEEEEe
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANL-SAANCYKSEHLKRPEIWSIVEKAKYYYIA 164 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~i~ 164 (341)
.+|+|.+|+++++.|++.||+++++...+.+|+.+++.+++++|++..+. +....+..+. ...+.+.++|+++++
T Consensus 45 ~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~t~~~~~~~~~~~r~~~~~~~~~~~~~~~~~----~~~~~l~~~~~v~~~ 120 (260)
T PRK09813 45 WVGDDDYGTKLKQDLARMGVDISHVHTKHGVTAQTQVELHDNDRVFGDYTEGVMADFALSE----EDYAWLAQYDIVHAA 120 (260)
T ss_pred EecCcHHHHHHHHHHHHcCCcchheeeecCCCceEEEEEeCCcEEeeccCCCcccccccCH----HHHHHHHhCCEEEEe
Confidence 99999999999999999999999986545678888777777888765443 3223332221 123567899999996
Q ss_pred ccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHHHH
Q 019402 165 GFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKI 244 (341)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l 244 (341)
.+. ...++++.++++++++++|+.... ..+.+.++++++|+++.|+++. ..+.+++++.+
T Consensus 121 ~~~------~~~~~~~~~~~~~~~v~~D~~~~~----~~~~~~~~~~~~d~~~~~~~~~----------~~~~~~~~~~~ 180 (260)
T PRK09813 121 IWG------HAEDAFPQLHAAGKLTAFDFSDKW----DSPLWQTLVPHLDYAFASAPQE----------DEFLRLKMKAI 180 (260)
T ss_pred ccc------hHHHHHHHHHHcCCeEEEEcCCCc----cHHHHHHhCCceeEEEecCCcc----------hHHHHHHHHHH
Confidence 421 235677888899999999996532 1234567899999999886531 12345677777
Q ss_pred hcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHHHHh
Q 019402 245 SQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAAN 324 (341)
Q Consensus 245 ~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa 324 (341)
...+++.+|||+|++|++++++++.+++|++++ +++|||||||+|+|||++++.+|+++++|+++|+++|+
T Consensus 181 ------~~~g~~~viit~G~~Ga~~~~~~~~~~~~~~~~---~~vDttGAGDaF~ag~i~~~~~g~~~~~al~~a~~~aa 251 (260)
T PRK09813 181 ------VARGAGVVIVTLGENGSIAWDGAQFWRQAPEPV---TVVDTMGAGDSFIAGFLCGWLAGMTLPQAMAQGTACAA 251 (260)
T ss_pred ------HHcCCCEEEEEECCCceEEEECCEEEecCCccc---CCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 456788999999999999999988888887765 78999999999999999999999999999999999999
Q ss_pred hhhhhccc
Q 019402 325 VVIQRSGC 332 (341)
Q Consensus 325 ~~v~~~g~ 332 (341)
+++++.|+
T Consensus 252 ~~~~~~G~ 259 (260)
T PRK09813 252 KTIQYHGA 259 (260)
T ss_pred HHHhccCC
Confidence 99999986
|
|
| >COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=282.59 Aligned_cols=290 Identities=19% Similarity=0.185 Sum_probs=246.6
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
-+++.=++++|.+..+++ -+.+++++.......+||+|.|+|.+|++ + |.++..+|
T Consensus 2 I~TvTLNPaiD~~~~l~~---------------------l~~g~vNr~~~~~~~aGGKGINVa~vL~~-l--G~~~~a~G 57 (310)
T COG1105 2 IYTVTLNPALDYTVFLDE---------------------LELGEVNRVRAVTKTAGGKGINVARVLKD-L--GIPVTALG 57 (310)
T ss_pred eEEEecChhHhheeeccc---------------------ccccceeeeccceecCCCCceeHHHHHHH-c--CCCceEEE
Confidence 467788999999999973 45677888899999999999999999997 4 49999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCC-ch-hHhhhhcceEEEE
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKR-PE-IWSIVEKAKYYYI 163 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~v~i 163 (341)
.+|.+ .|+++.+.|++.||...++++.+ +|+.++-+.++.+........+...++++++.. .+ ....+.+.|+|++
T Consensus 58 flGg~-tg~~~~~~l~~~gi~~~fv~v~g-~TRinvki~~~~~~~~Tein~~Gp~is~~~~~~~l~~~~~~l~~~d~Vvl 135 (310)
T COG1105 58 FLGGF-TGEFFVALLKDEGIPDAFVEVKG-DTRINVKILDEEDGEETEINFPGPEISEAELEQFLEQLKALLESDDIVVL 135 (310)
T ss_pred ecCCc-cHHHHHHHHHhcCCCceEEEccC-CCeeeEEEEecCCCcEEEecCCCCCCCHHHHHHHHHHHHHhcccCCEEEE
Confidence 99996 89999999999999999998655 699998888754322223334446777777665 22 2234788999999
Q ss_pred ecccc-ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCC-CCcEEEcCHHHHHHHHhhcCCCCCCHHHHH
Q 019402 164 AGFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP-YMDYVFGNETEARTFAKVHGWETDNVEEIA 241 (341)
Q Consensus 164 ~~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~-~~dil~~n~~E~~~l~~~~~~~~~~~~~~~ 241 (341)
+|+.+ .++.+.+.++++.+++.+.++++|.++.. +.+.++ ..++++||.+|++.+++....+..+..+++
T Consensus 136 sGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg~~--------L~~~L~~~P~lIKPN~~EL~~~~g~~~~~~~d~i~~a 207 (310)
T COG1105 136 SGSLPPGVPPDAYAELIRILRQQGAKVILDTSGEA--------LLAALEAKPWLIKPNREELEALFGRELTTLEDVIKAA 207 (310)
T ss_pred eCCCCCCCCHHHHHHHHHHHHhcCCeEEEECChHH--------HHHHHccCCcEEecCHHHHHHHhCCCCCChHHHHHHH
Confidence 99764 67889999999999999999999998765 445554 488889999999999998877777888888
Q ss_pred HHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHH
Q 019402 242 LKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCY 321 (341)
Q Consensus 242 ~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~ 321 (341)
+.+ +..|+..|||++|++|+++.+++..|++.+|+ +++++|+||||++.|||++++++++++++++++|++
T Consensus 208 ~~l------~~~g~~~ViVSlG~~Gal~~~~~~~~~a~~p~---~~vvstVGAGDs~VAGf~~~~~~~~~~e~~l~~avA 278 (310)
T COG1105 208 REL------LAEGIENVIVSLGADGALLVTAEGVYFASPPK---VQVVSTVGAGDSMVAGFLAGLLKGKSLEEALRFAVA 278 (310)
T ss_pred HHH------HHCCCCEEEEEecCcccEEEccCCeEEEeCCC---cceecCcCchHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 887 77899999999999999999999999998665 499999999999999999999999999999999999
Q ss_pred HHhhhhhhccccCCCCC
Q 019402 322 AANVVIQRSGCTYPPKP 338 (341)
Q Consensus 322 ~aa~~v~~~g~~~p~~~ 338 (341)
+|+.++++.+..+|+.+
T Consensus 279 ~g~a~~~~~~~~~~~~~ 295 (310)
T COG1105 279 CGAAAASQKGTGIPDLD 295 (310)
T ss_pred HHHHHhhcCCCCCCCHH
Confidence 99999999999887765
|
|
| >TIGR01231 lacC tagatose-6-phosphate kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=293.35 Aligned_cols=288 Identities=15% Similarity=0.179 Sum_probs=223.0
Q ss_pred EEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEEe
Q 019402 7 LLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGC 86 (341)
Q Consensus 7 i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~~ 86 (341)
+++.=++++|.+..++ ++|..+ .....+...++||++.|+|.+|++ +|.++.++|.
T Consensus 2 ~~~~~~p~~d~~~~~~--------------------~~~~~~-~~~~~~~~~~~GG~~~NvA~~la~---LG~~v~~i~~ 57 (309)
T TIGR01231 2 LTVTLNPSVDISYPLT--------------------ALKLDT-VNRVQEVSKTAGGKGLNVTRVLAQ---VGDPVLASGF 57 (309)
T ss_pred EEEEcchHHeEEEEcC--------------------CeeeCc-eEeeceeeecCCccHHHHHHHHHH---cCCCeEEEEE
Confidence 4567789999988886 455555 446678889999999999999998 4599999999
Q ss_pred ecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCC--chhHhhhhcceEEEEe
Q 019402 87 IGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKR--PEIWSIVEKAKYYYIA 164 (341)
Q Consensus 87 vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~i~ 164 (341)
+|+ .+|+++++.|++.||+++++... .+|+.++.++++|+++++...++. +..+.... ....+.++++|++|++
T Consensus 58 vG~-~~G~~i~~~l~~~GV~~~~~~~~-~~t~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~ 133 (309)
T TIGR01231 58 LGG-KLGEFIEKELDHSDIKHAFYKIS-GETRNCIAILHEGQQTEILEQGPE--ISNQEAAGFLKHFEQLLEKVEVVAIS 133 (309)
T ss_pred ecC-hhHHHHHHHHHHcCCceeEEECC-CCCEEeEEEEeCCCEEEEeCCCCC--CCHHHHHHHHHHHHHHhccCCEEEEE
Confidence 997 59999999999999999988643 357677666667888876655532 22211100 1123457899999999
Q ss_pred cccc-ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCC-CCCCHHHHHH
Q 019402 165 GFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGW-ETDNVEEIAL 242 (341)
Q Consensus 165 ~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~-~~~~~~~~~~ 242 (341)
++.. ..+...+..+++.+++.|+++++|+..... ..+.+.++++|++++|.+|++.+++.... +.++..+.++
T Consensus 134 g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~-----~~~~~~~~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~ 208 (309)
T TIGR01231 134 GSLPKGLPQDYYAQIIERCQNKGVPVVLDCSGATL-----QTVLENPAKPTVIKPNIEELSQLLNQELTEDLESLKQALS 208 (309)
T ss_pred CCCCCCcCHHHHHHHHHHHHhCCCeEEEECChHHH-----HHHHhccCCCeEEcCCHHHHHHHhCCCCCCCHHHHHHHHH
Confidence 8753 345678899999999999999999975431 22445567899999999999999874221 1122333444
Q ss_pred HHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHHH
Q 019402 243 KISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYA 322 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~ 322 (341)
.+ ...|++.+++|+|++|++++.+++.++++++++ +++|||||||+|+|||+++|++|+++++|+++|+++
T Consensus 209 ~~------~~~g~~~vivT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~agfl~~l~~g~~~~~a~~~a~a~ 279 (309)
T TIGR01231 209 QP------LFSGIEWIIVSLGAQGAFAKHGHTFYKVNIPTI---SVVNPVGSGDSTVAGITSALLNHESDHDLLKKANTL 279 (309)
T ss_pred HH------HHcCCCEEEEccCCCceEEEeCCeeEEeeCCcc---CcCCCcchHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 44 345788999999999999998888888887655 789999999999999999999999999999999999
Q ss_pred HhhhhhhccccCCC
Q 019402 323 ANVVIQRSGCTYPP 336 (341)
Q Consensus 323 aa~~v~~~g~~~p~ 336 (341)
|++++++.+..-.+
T Consensus 280 aa~~~~~~~~~~~~ 293 (309)
T TIGR01231 280 GMLNAQEAQTGHVN 293 (309)
T ss_pred HHHHhcCcccCCCC
Confidence 99999988875443
|
This enzyme is part of the tagatose-6-phosphate pathway of lactose degradation. |
| >PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=296.17 Aligned_cols=296 Identities=15% Similarity=0.147 Sum_probs=218.9
Q ss_pred cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEE
Q 019402 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~l 83 (341)
.++|+|+|.+++|++...+.. .+++ +.+............+|| ++|+|.++++ ||.++.+
T Consensus 10 ~~~ilviG~~~lD~~~~~~~~------------~~~~----~~~~~~~~~~~~~~~~GG-a~NvA~~la~---LG~~v~~ 69 (473)
T PRK11316 10 RAGVLVVGDVMLDRYWYGPTS------------RISP----EAPVPVVKVNQIEERPGG-AANVAMNIAS---LGAQARL 69 (473)
T ss_pred CCcEEEECccEEeeeeecccc------------eeCC----CCCCCEEEeeeEEecCcH-HHHHHHHHHH---cCCcEEE
Confidence 457999999999999875310 0000 122223555677888999 7999999998 4599999
Q ss_pred EEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeeccc-ccccCCcccCCCchhHhhhhcceEEE
Q 019402 84 IGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLS-AANCYKSEHLKRPEIWSIVEKAKYYY 162 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~ 162 (341)
+|.+|+|.+|+.+++.|++.||+++++...+.+|+.++++++.+......... ....++.+.+.. .....++++++++
T Consensus 70 i~~vG~D~~g~~i~~~L~~~gI~~~~v~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~l~~~~~v~ 148 (473)
T PRK11316 70 VGLTGIDEAARALSKLLAAVGVKCDFVSVPTHPTITKLRVLSRNQQLIRLDFEEGFEGVDPQPLLE-RIEQALPSIGALV 148 (473)
T ss_pred EEEEcCCHHHHHHHHHHHHcCCceeEEEcCCCCCCeeEEEEeCCceEEecccccCCCchhHHHHHH-HHHHHhccCCEEE
Confidence 99999999999999999999999998866667788888877643332211111 111112222111 1235588999999
Q ss_pred EeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHH
Q 019402 163 IAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIAL 242 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~ 242 (341)
++++.... .+.+..+++.+++.+.++++|+.... ...++.+|++++|++|++.+++.. .+.++..+.++
T Consensus 149 is~~~~~~-~~~~~~~~~~~k~~g~~vv~Dp~~~~---------~~~~~~~dil~pN~~Ea~~l~g~~-~~~~~~~~~~~ 217 (473)
T PRK11316 149 LSDYAKGA-LASVQAMIQLARKAGVPVLIDPKGTD---------FERYRGATLLTPNLSEFEAVVGKC-KDEAELVEKGM 217 (473)
T ss_pred EecCCccc-hhHHHHHHHHHHhcCCeEEEeCCCCC---------ccccCCCeEECcCHHHHHHHhCCC-CCHHHHHHHHH
Confidence 98654322 35688899999999999999996432 134678999999999999998731 11222333444
Q ss_pred HHhcCCCCCCCCccEEEEeeCCCCEEEEeCCe-EEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHH
Q 019402 243 KISQWPKASGTHKRITVITQGADPVVVAEDGK-VKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCY 321 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~-~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~ 321 (341)
.+. ...|++.++||+|++|++++.++. .+++|++++ +++||+||||+|.|||+++|++|+++++|+++|++
T Consensus 218 ~l~-----~~~g~~~vvVT~G~~G~~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~aa~~~~l~~g~~~~~al~~A~a 289 (473)
T PRK11316 218 KLI-----ADYDLSALLVTRSEQGMTLLQPGKAPLHLPTQAR---EVYDVTGAGDTVISVLAAALAAGNSLEEACALANA 289 (473)
T ss_pred HHH-----HhcCCCEEEEEecCCCcEEEecCCceEEecCcCC---CCCCCCCCcHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 442 345788999999999998887665 477776654 88999999999999999999999999999999999
Q ss_pred HHhhhhhhccccCCCCCC
Q 019402 322 AANVVIQRSGCTYPPKPE 339 (341)
Q Consensus 322 ~aa~~v~~~g~~~p~~~e 339 (341)
+|++++++.|+..++.++
T Consensus 290 ~Aa~~v~~~G~~~~~~~~ 307 (473)
T PRK11316 290 AAGVVVGKLGTSTVSPIE 307 (473)
T ss_pred HHHhhcccCCCccCCHHH
Confidence 999999999997665554
|
|
| >cd01946 ribokinase_group_C Ribokinase-like subgroup C | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=268.07 Aligned_cols=266 Identities=22% Similarity=0.279 Sum_probs=202.4
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
.|+++|++++|++.... ......+||++.|+|.++++| | ++.++|
T Consensus 1 ~v~~~G~~~~D~~~~~~-------------------------------~~~~~~~GG~a~N~a~~la~l---g-~v~~i~ 45 (277)
T cd01946 1 SLLVVGSVAFDAIETPF-------------------------------GKVDKALGGSATYFSLSASYF---T-DVRLVG 45 (277)
T ss_pred CeEEEEEeeeeeecCCC-------------------------------ceeeeccCchHHHHHHHHHHh---c-cceeEE
Confidence 38999999999994221 113467999999999999983 3 599999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEeec-CCCCcceEEEEE--e-CCeeceeecccccccCCcccCCCchhHhhhhcceEE
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYED-ESAPTGTCAVCV--V-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYY 161 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~-~~~~t~~~~~~~--~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 161 (341)
.+|+| +|+.+++.|+++||++++++. .+.+|....... + ++++......+....+.+. ..+.+.+++++
T Consensus 46 ~vG~D-~g~~~~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~v 118 (277)
T cd01946 46 VVGED-FPEEDYKLLNSHNIVTLGLLSKEDGKTFHWAGRYHYDLNEADTLDTDLNVFADFDPQ------LPEHYKDSEFV 118 (277)
T ss_pred eccCc-ChHHHHHHHHhccCcceeEEEecCCCeEEEeeEehhhcccccchhhhhhHHhhcCCC------ChHHhhcCCEE
Confidence 99999 899999999999999999854 434442111010 0 1222222111111122111 12457889999
Q ss_pred EEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHH
Q 019402 162 YIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIA 241 (341)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~ 241 (341)
|+++ ++++....+++.+++. .++++|+. ..|.....+.+.++++++|++++|++|++.+++ .++.++++
T Consensus 119 ~~~~----~~~~~~~~~~~~~~~~-~~v~~D~~-~~~~~~~~~~~~~~l~~~d~~~~n~~E~~~l~g-----~~~~~~~~ 187 (277)
T cd01946 119 FLGN----IAPELQREVLEQVKDP-KLVVMDTM-NFWISIKPEKLKKVLAKVDVVIINDGEARQLTG-----AANLVKAA 187 (277)
T ss_pred EECC----CCHHHHHHHHHHHHhC-CEEEEccH-HHhhhhhHHHHHHHhccCCEEeCCHHHHHHHhC-----CchHHHHH
Confidence 9975 4567788888888877 78999984 345433445678899999999999999999976 34677888
Q ss_pred HHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCC-----CHHHHH
Q 019402 242 LKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEK-----PVEDCV 316 (341)
Q Consensus 242 ~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~-----~~~~a~ 316 (341)
+.+ ...+++.||+|+|.+|++++++++.+++|+++++ +++|||||||+|.|||+++|++++ ++++|+
T Consensus 188 ~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~--~~vDttGAGDaF~Agfl~~l~~~~~~~~~~~~~a~ 259 (277)
T cd01946 188 RLI------LAMGPKALIIKRGEYGALLFTDDGYFAAPAYPLE--SVFDPTGAGDTFAGGFIGYLASQKDTSEANMRRAI 259 (277)
T ss_pred HHH------HHcCCCEEEEecCCCcEEEEECCceEEcCCcccC--ccCCCCCchHHHHHHHHHHHHhCCCcchhhHHHHH
Confidence 888 5678899999999999999988888888876552 488999999999999999999884 699999
Q ss_pred HHHHHHHhhhhhhccc
Q 019402 317 RTGCYAANVVIQRSGC 332 (341)
Q Consensus 317 ~~A~~~aa~~v~~~g~ 332 (341)
++|+++|+++|++.|+
T Consensus 260 ~~a~~~aa~~~~~~G~ 275 (277)
T cd01946 260 IYGSAMASFCVEDFGT 275 (277)
T ss_pred HHhHHHHhhhhhhcCC
Confidence 9999999999999986
|
Found only in bacteria, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. |
| >PLN02630 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-36 Score=271.02 Aligned_cols=255 Identities=20% Similarity=0.216 Sum_probs=205.1
Q ss_pred CcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceE
Q 019402 3 YEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATS 82 (341)
Q Consensus 3 ~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~ 82 (341)
+.++|+++|++++|++...+ ......+||+++|+|.++++ ||.++.
T Consensus 10 ~~~~vlvvG~~~~D~i~~~g-------------------------------~~~~~~~GG~a~N~A~alar---LG~~~~ 55 (335)
T PLN02630 10 PQRRVLIVGNYCHDVLIQNG-------------------------------SVTAESLGGAASFISNVLDA---LSVECE 55 (335)
T ss_pred CCCCEEEEeeeeeeEEEeCC-------------------------------cEEEEecCcHHHHHHHHHHH---cCCceE
Confidence 46799999999999998654 11457899999999999998 459999
Q ss_pred EEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCC------eeceeecccccccCCcccCCCchhHhhhh
Q 019402 83 YIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGG------ERSLVANLSAANCYKSEHLKRPEIWSIVE 156 (341)
Q Consensus 83 li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (341)
++|.+|+|.. .+++...+..++.+|+.++.++++| +++++...+++..+++++++. ..+.
T Consensus 56 lis~VG~D~~----------~~v~~~~~~~~~~~T~~~~~~~~~g~~~~~~e~~i~~~~ga~~~l~~~di~~----~~~~ 121 (335)
T PLN02630 56 LVSKVGPDFL----------YQVSHPPIVIPDSKTTEFHADFDQGIDGNGHEDRVLKRVCACDPIEPSDIPD----MRYE 121 (335)
T ss_pred EEEEecCCcc----------ccccccceecCCCCceEEEEEEcCCcccCCCCeEEEEeccccCCCChHHCCH----HHhc
Confidence 9999999952 3677655544666788888877643 778888889999999998874 2467
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHh-----cCCeEEEeCCcHH---HHhhhhHHHHhhCCCCcEEEcCHHHHHHHHh
Q 019402 157 KAKYYYIAGFFLTVSPESIQMVAEHAAA-----KNKVFMMNLSAPF---ICEFFREPQEKALPYMDYVFGNETEARTFAK 228 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~d~~~~~---~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~ 228 (341)
.++++++.+ .++++....+++.++. +++.+++|+.... |. .....+.++++++|++++|++|+..+
T Consensus 122 ~~~~~~l~~---ei~~e~~~~~~~~a~~v~~D~~g~~~~~Dp~~~~~~~~~-~~~~~~~~~L~~iDil~~ne~Ea~~l-- 195 (335)
T PLN02630 122 FGMAVGVAG---EILPETLERMVEICDVVVVDIQALIRVFDPVDGTVKLVK-LEETGFYDMLPRIGFLKASSEEALFI-- 195 (335)
T ss_pred ccceeeecC---CCcHHHHHHHHHHhhhheeccCceEEecCCcccccccch-hhHHHHHHHHHhCCEEEecHHHHhhc--
Confidence 788888865 4567889999999988 7888999986521 11 01123668899999999999999875
Q ss_pred hcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhc
Q 019402 229 VHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQ 308 (341)
Q Consensus 229 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~ 308 (341)
+.+++. . ...+|||+|++|++++++++.+++|++++ +++|||||||+|+|||++++++
T Consensus 196 -------~~~~~~----------~--~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vDttGAGDaF~agfi~~l~~ 253 (335)
T PLN02630 196 -------DVEEVR----------Q--KCCVIVTNGKKGCRIYWKDGEMRVPPFPA---IQVDPTGAGDSFLGGFVAGLVQ 253 (335)
T ss_pred -------CHHHHc----------c--CCEEEEEECCCceEEEECCeeEEeCCCCC---CCCCCCChHHHHHHHHHHHHHc
Confidence 122221 1 13799999999999998888888887755 7899999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhhhhhcccc
Q 019402 309 EKPVEDCVRTGCYAANVVIQRSGCT 333 (341)
Q Consensus 309 g~~~~~a~~~A~~~aa~~v~~~g~~ 333 (341)
|+++++|+++|+++|++++++.|+.
T Consensus 254 g~~~~~a~~~A~a~aa~~v~~~G~~ 278 (335)
T PLN02630 254 GLAVPDAALLGNYFGSLAVEQVGIP 278 (335)
T ss_pred CCCHHHHHHHHHHHHHHHhCcCCCC
Confidence 9999999999999999999999963
|
|
| >cd01937 ribokinase_group_D Ribokinase-like subgroup D | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=259.14 Aligned_cols=251 Identities=16% Similarity=0.127 Sum_probs=193.8
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
||+++|++++|++...+ +....+||++.|+|.++++ + |.++.++|
T Consensus 1 ~il~iG~~~iD~~~~~~--------------------------------~~~~~~GG~~~Nva~~la~-l--G~~~~~i~ 45 (254)
T cd01937 1 KIVIIGHVTIDEIVTNG--------------------------------SGVVKPGGPATYASLTLSR-L--GLTVKLVT 45 (254)
T ss_pred CeEEEcceeEEEEecCC--------------------------------ceEEecCchhhhHHHHHHH-h--CCCeEEEE
Confidence 68999999999997432 3468999999999999998 4 59999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcceEEEEe
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIA 164 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~ 164 (341)
.+|+|.+|+ ++.|++.||++..+. ...|+.+++.++ +|+++++...+++...... . ..+.++|++|++
T Consensus 46 ~vG~D~~g~--~~~l~~~gv~~~~~~--~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~ 114 (254)
T cd01937 46 KVGRDYPDK--WSDLFDNGIEVISLL--STETTTFELNYTNEGRTRTLLAKCAAIPDTES---P----LSTITAEIVILG 114 (254)
T ss_pred eeCCCchHH--HHHHHHCCcEEEEec--CCCeEEEEEEecCCCCeeeeeccccCCccccc---c----cccCcccEEEEC
Confidence 999999998 688999999976543 335666666665 5677766555443322211 1 346789999997
Q ss_pred ccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHh--hhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHH
Q 019402 165 GFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICE--FFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIAL 242 (341)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~--~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~ 242 (341)
+. +++....+.+.+ .++++|+... +.. .....+.++++++|++++|++|++.+ .+.+++++
T Consensus 115 ~~----~~~~~~~~~~~~----~~v~~D~~~~-~~~~~~~~~~~~~~l~~~di~~~n~~E~~~~--------~~~~~~~~ 177 (254)
T cd01937 115 PV----PEEISPSLFRKF----AFISLDAQGF-LRRANQEKLIKCVILKLHDVLKLSRVEAEVI--------STPTELAR 177 (254)
T ss_pred CC----cchhcHHHHhhh----hheeEccccc-eeeccccchHHHhhcccCcEEEEcHHHHhhc--------CCHHHHHH
Confidence 53 334444443332 6788898643 211 12223568899999999999999872 35677888
Q ss_pred HHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHHH
Q 019402 243 KISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYA 322 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~ 322 (341)
.+ ...+++.+|||.|++|++++++++.+++++++. +++|||||||+|+|+|++++++|+++++|+++|+++
T Consensus 178 ~l------~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~---~~vdt~GAGD~f~a~~~~~l~~g~~~~~a~~~a~~~ 248 (254)
T cd01937 178 LI------KETGVKEIIVTDGEEGGYIFDGNGKYTIPASKK---DVVDPTGAGDVFLAAFLYSRLSGKDIKEAAEFAAAA 248 (254)
T ss_pred HH------HHcCCCEEEEeeCCcceEEEECCccEEccccCc---eeccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 87 566789999999999999998888888877654 789999999999999999999999999999999999
Q ss_pred Hhhhhh
Q 019402 323 ANVVIQ 328 (341)
Q Consensus 323 aa~~v~ 328 (341)
|+.+|+
T Consensus 249 aa~~i~ 254 (254)
T cd01937 249 AAKFIE 254 (254)
T ss_pred HHHHhC
Confidence 999874
|
Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. |
| >KOG2947 consensus Carbohydrate kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=222.30 Aligned_cols=290 Identities=17% Similarity=0.232 Sum_probs=231.2
Q ss_pred CCCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCc
Q 019402 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGA 80 (341)
Q Consensus 1 m~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~ 80 (341)
|-.++.|+++|...+|++..+| +.|.++...+..+...+-||.+.|++.+++. || .+
T Consensus 1 m~~~k~VLcVG~~~lD~iTivd--------------------~~~fe~~~~r~~~g~wqRgG~asNvcTvlrl-LG--~~ 57 (308)
T KOG2947|consen 1 MEEPKQVLCVGCTVLDVITIVD--------------------KYPFEDSEIRCLSGRWQRGGNASNVCTVLRL-LG--AP 57 (308)
T ss_pred CCCcceEEEeccEEEEEEEecc--------------------CCCCCccceehhhhhhhcCCCcchHHHHHHH-hC--Cc
Confidence 5567899999999999999998 6888888888899999999999999999995 44 99
Q ss_pred eEEEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEe--CCeeceeecccccccCCcccCCCchhHhhhhcc
Q 019402 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV--GGERSLVANLSAANCYKSEHLKRPEIWSIVEKA 158 (341)
Q Consensus 81 v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (341)
+.|+|.+.....-+++++.|++.|||+++....+.....+.++++ .|.|+++......+..+.+++.. -.+.+.
T Consensus 58 cef~Gvlsr~~~f~~lLddl~~rgIdishcpftd~~pp~ssiI~~r~s~trTil~~dks~p~vT~~dF~k----vdl~qy 133 (308)
T KOG2947|consen 58 CEFFGVLSRGHVFRFLLDDLRRRGIDISHCPFTDHSPPFSSIIINRNSGTRTILYCDKSLPDVTATDFEK----VDLTQY 133 (308)
T ss_pred hheeeecccchhHHHHHHHHHhcCCCcccCccccCCCCcceEEEecCCCceEEEEecCCCccccHHHhhh----ccccee
Confidence 999999999888999999999999999999766666666666665 48888888877777888777654 457899
Q ss_pred eEEEEeccccccCHHHHHHHHHHHHh----cCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCC
Q 019402 159 KYYYIAGFFLTVSPESIQMVAEHAAA----KNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWET 234 (341)
Q Consensus 159 ~~v~i~~~~~~~~~~~~~~~~~~~~~----~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~ 234 (341)
.|+|+.+.+.......++.+++.-.+ .++.+.+|+-.+. +....++..+|+++++++=++.+. -
T Consensus 134 ~WihfE~Rnp~etlkM~~~I~~~N~r~pe~qrI~vSvd~en~r------eq~~~l~am~DyVf~sK~~a~~~g------f 201 (308)
T KOG2947|consen 134 GWIHFEARNPSETLKMLQRIDAHNTRQPEEQRIRVSVDVENPR------EQLFQLFAMCDYVFVSKDVAKHLG------F 201 (308)
T ss_pred eeEEEecCChHHHHHHHHHHHHhhcCCCccceEEEEEEecCcH------HHHHHHhhcccEEEEEHHHHhhhc------c
Confidence 99999974322112223333332221 3456777776543 557788999999999999887764 3
Q ss_pred CCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEE-eCCeEEEEecccCCCCcccCCCCcchhhHHHHHHH-HhcCCCH
Q 019402 235 DNVEEIALKISQWPKASGTHKRITVITQGADPVVVA-EDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQ-LVQEKPV 312 (341)
Q Consensus 235 ~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~-~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~-l~~g~~~ 312 (341)
.+++++.+.+....+ .+..-+.+|+-.++.|+-.. .+++.+++++++.| ++||+.|+||+|.|||+|+ +.++.++
T Consensus 202 ks~rea~~~l~~r~~-~~~pkpv~I~~w~~eGA~~l~adg~yfev~a~~pp--kvVD~lg~~DtF~A~vIyA~lk~~r~l 278 (308)
T KOG2947|consen 202 KSPREACEGLYGRVP-KGKPKPVLICPWASEGAGALGADGKYFEVDAFKPP--KVVDTLGAGDTFNAGVIYALLKQGRSL 278 (308)
T ss_pred CCHHHHHHHHHhhcc-cCCCCcEEEeccccccccccCCCCCEEecCCCCCc--cceeeccCCCcchHHHHHHHHHhhhhH
Confidence 567788777754322 23334568888999888654 57789999988766 9999999999999999999 5789999
Q ss_pred HHHHHHHHHHHhhhhhhccc
Q 019402 313 EDCVRTGCYAANVVIQRSGC 332 (341)
Q Consensus 313 ~~a~~~A~~~aa~~v~~~g~ 332 (341)
.+|++||+++|+.++...|.
T Consensus 279 ~eAvdfg~rvas~Kl~g~Gf 298 (308)
T KOG2947|consen 279 AEAVDFGNRVASKKLGGQGF 298 (308)
T ss_pred HHHHHHHHHhhhcccccccc
Confidence 99999999999999999987
|
|
| >COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=234.88 Aligned_cols=295 Identities=16% Similarity=0.178 Sum_probs=225.9
Q ss_pred cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEE
Q 019402 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~l 83 (341)
+.+|+|+|.+++|.++.-+-+.+ ....|--..........+|| +.|+|..++. ||.++.+
T Consensus 10 ~~kVLVvGDvmLDrY~~G~~~RI----------------SPEAPVPVv~v~~e~~rlGG-AaNVa~Nias---LGa~a~l 69 (467)
T COG2870 10 QAKVLVVGDVMLDRYWYGKVSRI----------------SPEAPVPVVKVEKEEERLGG-AANVAKNIAS---LGANAYL 69 (467)
T ss_pred CCcEEEEcceeeeeecccccccc----------------CCCCCCceEEeccccccccc-HHHHHHHHHH---cCCCEEE
Confidence 45899999999999998652111 11223335566778889999 8999999887 4599999
Q ss_pred EEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCC-cccCCCchhHhhhhcceEEE
Q 019402 84 IGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYK-SEHLKRPEIWSIVEKAKYYY 162 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~ 162 (341)
+|.+|.|..|+.+.+.|...+++..+++.+.++|..-..++...++-+-.......... ...+. ..+.+.+.+.|+++
T Consensus 70 ~GvvG~Deag~~L~~~l~~~~i~~~l~~~~~r~T~~K~Rv~s~nQQllRvD~Ee~~~~~~~~~ll-~~~~~~l~~~~~vV 148 (467)
T COG2870 70 VGVVGKDEAGKALIELLKANGIDSDLLRDKNRPTIVKLRVLSRNQQLLRLDFEEKFPIEDENKLL-EKIKNALKSFDALV 148 (467)
T ss_pred EEeeccchhHHHHHHHHHhcCcccceEeecCCCceeeeeeecccceEEEecccccCcchhHHHHH-HHHHHHhhcCCEEE
Confidence 99999999999999999999999888888888898888777543332211111000110 01111 23446788999999
Q ss_pred EeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHH
Q 019402 163 IAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIAL 242 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~ 242 (341)
++-|....-.. .+.+++.|+++++++.+||.+... +....+.++.||..|++...+.+..+ ++..+...
T Consensus 149 LSDY~KG~L~~-~q~~I~~ar~~~~pVLvDPKg~Df---------~~Y~GAtLiTPN~~E~~~~vg~~~~e-~el~~~g~ 217 (467)
T COG2870 149 LSDYAKGVLTN-VQKMIDLAREAGIPVLVDPKGKDF---------EKYRGATLITPNLKEFEEAVGKCKSE-EELEERGQ 217 (467)
T ss_pred Eeccccccchh-HHHHHHHHHHcCCcEEECCCCcch---------hhhCCCeecCCCHHHHHHHHcccccH-HHHHHHHH
Confidence 99887433222 889999999999999999987542 34567999999999999998876543 44555555
Q ss_pred HHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHHH
Q 019402 243 KISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYA 322 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~ 322 (341)
+|. .+.....++||++++|..+++.++..|+|+..- ++.|.|||||+-+|.|.++++.|.++++|+.+||++
T Consensus 218 kL~-----~~~~L~alLvTRsE~GMtL~~~~~~~h~pt~Ak---EVyDVTGAGDTVIa~la~~laaG~s~~eAc~lAN~A 289 (467)
T COG2870 218 KLK-----EELDLSALLVTRSEKGMTLFQEGKPLHFPARAK---EVYDVTGAGDTVIAVLAAALAAGASLEEACELANAA 289 (467)
T ss_pred HHH-----HhhCcceEEEEeccCCceeecCCcccccchhhe---eeeeccCCCchHHHHHHHHHHcCCCHHHHHHHhhhh
Confidence 553 345678899999999999999888888887644 899999999999999999999999999999999999
Q ss_pred HhhhhhhccccCCCCC
Q 019402 323 ANVVIQRSGCTYPPKP 338 (341)
Q Consensus 323 aa~~v~~~g~~~p~~~ 338 (341)
|+.+|.+.|...-+.+
T Consensus 290 agiVVgKlGTatvs~~ 305 (467)
T COG2870 290 AGIVVGKLGTATVSPE 305 (467)
T ss_pred cceEEeeccceeecHH
Confidence 9999999998543333
|
|
| >cd00287 ribokinase_pfkB_like ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-29 Score=210.33 Aligned_cols=195 Identities=27% Similarity=0.356 Sum_probs=161.4
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
+|+++|++++|++..++ +.|.+++.++..+....+||+|.|+|.++++ + |.++.++|
T Consensus 1 ~v~~iG~~~~D~~~~~~--------------------~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~-L--G~~~~~~~ 57 (196)
T cd00287 1 RVLVVGSLLVDVILRVD--------------------ALPLPGGLVRPGDTEERAGGGAANVAVALAR-L--GVSVTLVG 57 (196)
T ss_pred CEEEEccceEEEEEEec--------------------cCCCCCCeEEeceeeecCCCcHHHHHHHHHH-C--CCcEEEEE
Confidence 48999999999999998 6788888888999999999999999999998 4 59999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCCchhHhhhhcceEEEEec
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAG 165 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~ 165 (341)
+|++|+++
T Consensus 58 ------------------------------------------------------------------------~~~v~i~~ 65 (196)
T cd00287 58 ------------------------------------------------------------------------ADAVVISG 65 (196)
T ss_pred ------------------------------------------------------------------------ccEEEEec
Confidence 78999988
Q ss_pred cccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHHHHh
Q 019402 166 FFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKIS 245 (341)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~ 245 (341)
..+. .+.+.++++.+++.+.++++|+........ .+.+.++++++|++++|.+|++.+++....+.++..++++.+
T Consensus 66 ~~~~--~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~-~~~~~~~~~~~dvl~~n~~E~~~l~~~~~~~~~~~~~~~~~l- 141 (196)
T cd00287 66 LSPA--PEAVLDALEEARRRGVPVVLDPGPRAVRLD-GEELEKLLPGVDILTPNEEEAEALTGRRDLEVKEAAEAAALL- 141 (196)
T ss_pred ccCc--HHHHHHHHHHHHHcCCeEEEeCCccccccc-cchHHHHHhhCCEECCCHHHHHHHhCCCCCChHHHHHHHHHH-
Confidence 5432 478888999999999999999976532211 122567889999999999999999875443333445677777
Q ss_pred cCCCCCCCCccEEEEeeCCCCEEEEe-CCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHh
Q 019402 246 QWPKASGTHKRITVITQGADPVVVAE-DGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLV 307 (341)
Q Consensus 246 ~~~~~~~~~~~~vvvt~G~~G~~~~~-~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~ 307 (341)
...+++.+|+|+|++|+++++ ++..+++++++. +++||+||||+|+|||++++.
T Consensus 142 -----~~~g~~~vvvt~G~~g~~~~~~~~~~~~~~~~~~---~~vdt~GAGD~f~ag~~~~l~ 196 (196)
T cd00287 142 -----LSKGPKVVIVTLGEKGAIVATRGGTEVHVPAFPV---KVVDTTGAGDAFLAALAAGLA 196 (196)
T ss_pred -----HhcCCCEEEEEECCCccEEEecCCceEEcCCccC---CcccCCCchHHHHHHHHHHhC
Confidence 567789999999999999998 777788776643 789999999999999999874
|
The superfamily includes ribokinase, fructokinase, ketohexokinase, 2-dehydro-3-deoxygluconokinase, 1-phosphofructokinase, the minor 6-phosphofructokinase (PfkB), inosine-guanosine kinase, and adenosine kinase. Even though there is a high degree of structural conservation within this superfamily, their multimerization level varies widely, monomeric (e.g. adenosine kinase), dimeric (e.g. ribokinase), and trimeric (e.g THZ kinase). |
| >cd01173 pyridoxal_pyridoxamine_kinase Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5'-phosphate (PLP), by catalyzing the phosphorylation of the precursor vitamin B6 in the presence of Zn2+ and ATP | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.9e-19 Score=156.92 Aligned_cols=165 Identities=13% Similarity=0.140 Sum_probs=124.8
Q ss_pred hcceEEEEecccc-ccCHHHHHHHHHHHHhc--CCeEEEeCC----cHHH--HhhhhHHHHhhCC-CCcEEEcCHHHHHH
Q 019402 156 EKAKYYYIAGFFL-TVSPESIQMVAEHAAAK--NKVFMMNLS----APFI--CEFFREPQEKALP-YMDYVFGNETEART 225 (341)
Q Consensus 156 ~~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~--~~~v~~d~~----~~~~--~~~~~~~~~~~l~-~~dil~~n~~E~~~ 225 (341)
.+.+++. .|+.. ....+.+.++++.++++ +.++++|+. +..| .....+.+.+++. ++|++++|.+|++.
T Consensus 71 ~~~~~v~-~G~l~~~~~~~~~~~~l~~~~~~~~~~~vv~Dpv~~~~~~~~~~~~~~~~~~~~~l~~~~dvi~pN~~Ea~~ 149 (254)
T cd01173 71 LEYDAVL-TGYLGSAEQVEAVAEIVKRLKEKNPNLLYVCDPVMGDNGKLYVVAEEIVPVYRDLLVPLADIITPNQFELEL 149 (254)
T ss_pred ccCCEEE-EecCCCHHHHHHHHHHHHHHHHhCCCceEEECCCCCcCCcceecChhHHHHHHHHHHhcCCEECCcHHHHHH
Confidence 4567774 55432 23457788888888877 889999983 2222 2224455667676 99999999999999
Q ss_pred HHhhcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCC------CEEEEeCCeEEEEecccCCCCcccCCCCcchhhH
Q 019402 226 FAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGAD------PVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFV 299 (341)
Q Consensus 226 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~------G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~ 299 (341)
+++....+.++.+++++++ ...|++.|+||.|.. |++++++++.+.++.+.. +. ++|++||||+|+
T Consensus 150 l~g~~~~~~~~~~~~~~~l------~~~g~~~Vvit~g~~~~~~~~g~~~~~~~~~~~~~~~~~-~~-~~~~~GaGD~f~ 221 (254)
T cd01173 150 LTGKKINDLEDAKAAARAL------HAKGPKTVVVTSVELADDDRIEMLGSTATEAWLVQRPKI-PF-PAYFNGTGDLFA 221 (254)
T ss_pred HcCCCcCCHHHHHHHHHHH------HHhCCCEEEEEeeccCCCCcEEEEEEecCccEEEEeecc-CC-CCCcCChHHHHH
Confidence 9876544445667788888 567889999999985 788887766555554444 22 699999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHhhhhhh
Q 019402 300 GGFLSQLVQEKPVEDCVRTGCYAANVVIQR 329 (341)
Q Consensus 300 a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~ 329 (341)
|+|+++|++|+++++|+++|++.....++.
T Consensus 222 a~~~~~l~~g~~~~~a~~~A~~~~~~~i~~ 251 (254)
T cd01173 222 ALLLARLLKGKSLAEALEKALNFVHEVLEA 251 (254)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998777654
|
Mammals are unable to synthesize PLP de novo and require its precursors in the form of vitamin B6 (pyridoxal, pyridoxine, and pyridoxamine) from their diet. Pyridoxal kinase encoding genes are also found in many other species including yeast and bacteria. |
| >PRK12412 pyridoxal kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.6e-18 Score=151.64 Aligned_cols=161 Identities=21% Similarity=0.180 Sum_probs=124.7
Q ss_pred ceEEEEeccccccCHHHHHHHHHHHHhcCCe-EEEeCCcHH------HHhh-hhHHHHhhCCCCcEEEcCHHHHHHHHhh
Q 019402 158 AKYYYIAGFFLTVSPESIQMVAEHAAAKNKV-FMMNLSAPF------ICEF-FREPQEKALPYMDYVFGNETEARTFAKV 229 (341)
Q Consensus 158 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~-v~~d~~~~~------~~~~-~~~~~~~~l~~~dil~~n~~E~~~l~~~ 229 (341)
.|.+.+.- -.+.+.+..+++.+++.+.+ +++||.... .... .....+++++++|++++|..|++.|++.
T Consensus 73 ~~~ikiG~---l~~~~~v~~i~~~~~~~~~~~vv~DPv~~~~~g~~~~~~~~~~~~~~~ll~~advitpN~~Ea~~L~g~ 149 (268)
T PRK12412 73 VDALKTGM---LGSVEIIEMVAETIEKHNFKNVVVDPVMVCKGADEALHPETNDCLRDVLVPKALVVTPNLFEAYQLSGV 149 (268)
T ss_pred CCEEEECC---CCCHHHHHHHHHHHHhcCCCCEEECcCeeeCCCCcCCChHHHHHHHHhhhccceEEcCCHHHHHHHhCc
Confidence 68888752 34678888898999888876 999985311 1111 1223456889999999999999999875
Q ss_pred cCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCE------EEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHH
Q 019402 230 HGWETDNVEEIALKISQWPKASGTHKRITVITQGADPV------VVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFL 303 (341)
Q Consensus 230 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~------~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~ 303 (341)
...+.++..++++++ .+.|++.|+||.|..|+ +++.++..++++.+++ +.+|++||||+|+|+|+
T Consensus 150 ~~~~~~~~~~aa~~l------~~~g~~~ViIt~G~~g~~~~~~~~~~~~~~~~~~~~~~v---~~~~t~GaGD~f~aa~a 220 (268)
T PRK12412 150 KINSLEDMKEAAKKI------HALGAKYVLIKGGSKLGTETAIDVLYDGETFDLLESEKI---DTTNTHGAGCTYSAAIT 220 (268)
T ss_pred CCCCHHHHHHHHHHH------HhcCCCEEEEeccCCCCCCceEEEEEeCCEEEEEEeCcc---CCCCCCchHHHHHHHHH
Confidence 433445577788888 56789999999998763 4555666566776544 78899999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHhhhhhhc
Q 019402 304 SQLVQEKPVEDCVRTGCYAANVVIQRS 330 (341)
Q Consensus 304 ~~l~~g~~~~~a~~~A~~~aa~~v~~~ 330 (341)
++|++|+++++|+++|.++....++..
T Consensus 221 a~l~~g~~l~eA~~~A~~~~~~~i~~~ 247 (268)
T PRK12412 221 AELAKGKPVKEAVKTAKEFITAAIRYS 247 (268)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888763
|
|
| >TIGR00097 HMP-P_kinase phosphomethylpyrimidine kinase | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.7e-18 Score=149.00 Aligned_cols=162 Identities=14% Similarity=0.168 Sum_probs=124.7
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhcCC-eEEEeCCcH------HHHhhh-hHHHHhhCCCCcEEEcCHHHHHHHHh
Q 019402 157 KAKYYYIAGFFLTVSPESIQMVAEHAAAKNK-VFMMNLSAP------FICEFF-REPQEKALPYMDYVFGNETEARTFAK 228 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~-~v~~d~~~~------~~~~~~-~~~~~~~l~~~dil~~n~~E~~~l~~ 228 (341)
+.+.+.+.- -.+.+.+..+++.+++.+. ++++||... .+.... ......+++++|++++|..|++.|++
T Consensus 67 ~~~aikiG~---l~~~~~~~~i~~~~~~~~~~~vVlDPv~~~~~g~~l~~~~~~~~~~~~ll~~~dvitpN~~Ea~~L~g 143 (254)
T TIGR00097 67 PVDAAKTGM---LASAEIVEAVARKLREYPVRPLVVDPVMVAKSGAPLLEEEAIEALRKRLLPLATLITPNLPEAEALLG 143 (254)
T ss_pred CCCEEEECC---cCCHHHHHHHHHHHHhcCCCcEEECCccccCCCCcCCCHHHHHHHHHhccccccEecCCHHHHHHHhC
Confidence 356677642 2367889999999998888 699997421 111111 12234688999999999999999987
Q ss_pred hcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCC----CCE-EEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHH
Q 019402 229 VHGWETDNVEEIALKISQWPKASGTHKRITVITQGA----DPV-VVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFL 303 (341)
Q Consensus 229 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~----~G~-~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~ 303 (341)
....+.++..++++.+ ...|++.|+||.|+ +|. +++++++.++++.+++ +++|++||||+|+|+|+
T Consensus 144 ~~~~~~~~~~~~a~~l------~~~g~~~Vvvt~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~d~~GaGD~f~aala 214 (254)
T TIGR00097 144 TKIRTEQDMIKAAKKL------RELGPKAVLIKGGHLEGDQAVDVLFDGGEIHILKAPRI---ETKNTHGTGCTLSAAIA 214 (254)
T ss_pred CCCCCHHHHHHHHHHH------HhcCCCEEEEeCCCCCCCceeEEEEECCeEEEEEeccc---CCCCCCChHHHHHHHHH
Confidence 5433334566788888 56789999999997 344 5577776777776544 78999999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHhhhhhhc
Q 019402 304 SQLVQEKPVEDCVRTGCYAANVVIQRS 330 (341)
Q Consensus 304 ~~l~~g~~~~~a~~~A~~~aa~~v~~~ 330 (341)
++|++|+++++|+++|++++...+++.
T Consensus 215 a~la~g~~l~eA~~~A~~~~~~~i~~~ 241 (254)
T TIGR00097 215 ANLAKGLSLKEAVKEAKEFVTGAIRYG 241 (254)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999764
|
This model represents phosphomethylpyrimidine kinase, the ThiD protein of thiamine biosynthesis. The protein is commonly observed within operons containing other thiamine biosynthesis genes. Numerous examples are fusion proteins with other thiamine-biosynthetic domains. Saccaromyces has three recent paralogs, two of which are isofunctional and score above the trusted cutoff. The third shows a longer branch length in a phylogenetic tree and scores below the trusted cutoff, as do putative second copies in a number of species. |
| >TIGR00687 pyridox_kin pyridoxal kinase | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.6e-18 Score=154.79 Aligned_cols=163 Identities=13% Similarity=0.164 Sum_probs=117.7
Q ss_pred hhcceEEEEecccc-ccCHHHHHHHHHHHHhcC--CeEEEeCC------cHHHHhhhhHHH-HhhCCCCcEEEcCHHHHH
Q 019402 155 VEKAKYYYIAGFFL-TVSPESIQMVAEHAAAKN--KVFMMNLS------APFICEFFREPQ-EKALPYMDYVFGNETEAR 224 (341)
Q Consensus 155 ~~~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~--~~v~~d~~------~~~~~~~~~~~~-~~~l~~~dil~~n~~E~~ 224 (341)
+.+.|++ +.|+.. ....+.+.++++.+++.+ ..+++||. .........+.+ .++++++|++++|.+|++
T Consensus 72 ~~~~d~v-~~G~l~~~~~~~~~~~~l~~~~~~~~~~~vv~Dpv~~d~~~~~~~~~~~~~~~~~~ll~~adii~pN~~Ea~ 150 (286)
T TIGR00687 72 LNQCDAV-LSGYLGSAEQVAMVVGIVRQVKQANPQALYVCDPVMGDPEKGCYVAPDLLEVYREKAIPVADIITPNQFELE 150 (286)
T ss_pred cccCCEE-EECCCCCHHHHHHHHHHHHHHHHhCCCCcEEECCeeeeCCCCeeeChhHHHHHHHhccccccEecCCHHHHH
Confidence 4578887 555532 223468888888888776 56788982 211111222334 458899999999999999
Q ss_pred HHHhhcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEe-eCCCCE--------EEEeCCeEEEEecccCCCCc-ccCCCCc
Q 019402 225 TFAKVHGWETDNVEEIALKISQWPKASGTHKRITVIT-QGADPV--------VVAEDGKVKLFPVILLPKEK-LVDTNGA 294 (341)
Q Consensus 225 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt-~G~~G~--------~~~~~~~~~~v~~~~~~~~~-vvdttGA 294 (341)
.+++....+.++..++++.+ ...|++.+||| .|.+|+ +++++++.++++.++. + ++|++||
T Consensus 151 ~L~g~~~~~~~~~~~~~~~l------~~~g~~~Viit~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~d~~Ga 221 (286)
T TIGR00687 151 LLTGRKINTVEEALAAADAL------IAMGPDIVLVTHLARAGSQRDRDFEGLVVTQEGRWHISRPLA---VFMRQPVGT 221 (286)
T ss_pred HHhCCCcCCHHHHHHHHHHH------HHhCCCEEEEEeccccCCCCCcceeEEEEcCCceEEEeccCc---CCCCCCCCh
Confidence 99875433344556677777 56688999999 687775 4455565666665444 4 6899999
Q ss_pred chhhHHHHHHHHhcCCCHHHHHHHHHHHHhhhh
Q 019402 295 GDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVI 327 (341)
Q Consensus 295 GDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v 327 (341)
||+|+|+|++++++|+++++|+++|+++....+
T Consensus 222 GD~f~A~~l~~l~~g~~~~~al~~A~~~v~~~l 254 (286)
T TIGR00687 222 GDLIAALLLATLLHGNSLKEALEKTVSAVYHVL 254 (286)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999944333
|
ThiD and related proteins form an outgroup. |
| >PRK05756 pyridoxamine kinase; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.6e-18 Score=153.31 Aligned_cols=166 Identities=17% Similarity=0.179 Sum_probs=122.6
Q ss_pred hhcceEEEEecccc-ccCHHHHHHHHHHHHhcC--CeEEEeCCcH-----HH-Hhhh-hHHHHhhCCCCcEEEcCHHHHH
Q 019402 155 VEKAKYYYIAGFFL-TVSPESIQMVAEHAAAKN--KVFMMNLSAP-----FI-CEFF-REPQEKALPYMDYVFGNETEAR 224 (341)
Q Consensus 155 ~~~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~--~~v~~d~~~~-----~~-~~~~-~~~~~~~l~~~dil~~n~~E~~ 224 (341)
+...+++ ++|+.. ....+.+.++++.+++.+ ..+++||--. .+ .+.. ......+++++|++++|.+|++
T Consensus 72 l~~~~~v-~~G~l~~~~~~~~v~~~i~~~k~~~~~~~~v~DPv~~d~~~~~~~~~~~~~~~~~~ll~~adiitpN~~Ea~ 150 (286)
T PRK05756 72 LGECDAV-LSGYLGSAEQGEAILDAVRRVKAANPQALYFCDPVMGDPEKGCIVAPGVAEFLRDRALPAADIITPNLFELE 150 (286)
T ss_pred cccCCEE-EECCCCCHHHHHHHHHHHHHHHHhCCCceEEECCccccCCCCEEECccHhHHHHHhhcccccEecCCHHHHH
Confidence 3467866 566533 223467888888888766 4577886311 11 1111 2233458999999999999999
Q ss_pred HHHhhcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCC--------CEEEEeCCeEEEEecccCCCCcc-cCCCCcc
Q 019402 225 TFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGAD--------PVVVAEDGKVKLFPVILLPKEKL-VDTNGAG 295 (341)
Q Consensus 225 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~--------G~~~~~~~~~~~v~~~~~~~~~v-vdttGAG 295 (341)
.|++....+.++..++++++ ...|++.|+||.|.. |++++++++.++++.+++ ++ +|++|||
T Consensus 151 ~L~g~~~~~~~~~~~~~~~l------~~~g~~~Vvvt~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~v~~~GaG 221 (286)
T PRK05756 151 WLSGRPVETLEDAVAAARAL------IARGPKIVLVTSLARAGYPADRFEMLLVTADGAWHISRPLV---DFMRQPVGVG 221 (286)
T ss_pred HHhCCCcCCHHHHHHHHHHH------HHhCCCEEEEeccccCCCCCCcEEEEEEECCceEEEecCcc---CCCCCCCChH
Confidence 99875443344566777777 566889999999876 477777776777765544 56 7999999
Q ss_pred hhhHHHHHHHHhcCCCHHHHHHHHHHHHhhhhhhc
Q 019402 296 DAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRS 330 (341)
Q Consensus 296 Daf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~ 330 (341)
|+|+|+|++++++|+++++|+++|++.....++..
T Consensus 222 D~f~a~~~a~l~~g~~~~~al~~A~~~~~~~i~~~ 256 (286)
T PRK05756 222 DLTSALFLARLLQGGSLEEALEHTTAAVYEVMART 256 (286)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888763
|
|
| >PRK12413 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.3e-17 Score=146.40 Aligned_cols=163 Identities=17% Similarity=0.169 Sum_probs=117.1
Q ss_pred hcceEEEEe-ccccccCHHHHHHHHHHHH-hcCCeEEEeCCcHH--H----HhhhhHHHHhhCCCCcEEEcCHHHHHHHH
Q 019402 156 EKAKYYYIA-GFFLTVSPESIQMVAEHAA-AKNKVFMMNLSAPF--I----CEFFREPQEKALPYMDYVFGNETEARTFA 227 (341)
Q Consensus 156 ~~~~~v~i~-~~~~~~~~~~~~~~~~~~~-~~~~~v~~d~~~~~--~----~~~~~~~~~~~l~~~dil~~n~~E~~~l~ 227 (341)
...++..+. |+.. +.+....+++.++ ..+.++++||.... | .+...+.+.++++++|++++|.+|++.|+
T Consensus 67 ~~~~~~~i~~G~l~--~~~~~~~~~~~~~~~~~~~vv~DPv~~~~~~~~~~~~~~~~~l~~ll~~~dli~pN~~E~~~L~ 144 (253)
T PRK12413 67 KDVPFSAIKIGLLP--NVEIAEQALDFIKGHPGIPVVLDPVLVCKETHDVEVSELRQELIQFFPYVTVITPNLVEAELLS 144 (253)
T ss_pred hCCCCCEEEECCcC--CHHHHHHHHHHHHhCCCCCEEEcCceecCCCCccccHHHHHHHHHHhccCcEECCCHHHHHHHh
Confidence 344555554 4321 4456666666666 46788999974221 1 11123445578899999999999999999
Q ss_pred hhcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCC-----E-EEEeCCeEEEEecccCCCCcccCCCCcchhhHHH
Q 019402 228 KVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADP-----V-VVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGG 301 (341)
Q Consensus 228 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G-----~-~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~ 301 (341)
+....+.++.+++++.+ ...|++.|+||.|++| . +++.++..+ ++.++. ..+|++||||+|+|+
T Consensus 145 g~~~~~~~~~~~~a~~l------~~~g~~~Vvvt~g~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~GaGDaf~a~ 214 (253)
T PRK12413 145 GKEIKTLEDMKEAAKKL------YDLGAKAVVIKGGNRLSQKKAIDLFYDGKEFV-ILESPV---LEKNNIGAGCTFASS 214 (253)
T ss_pred CcCCCCHHHHHHHHHHH------HHcCCCEEEEeCCCCCCCCcceEEEEcCCEEE-EEeecc---cCCCCCChHHHHHHH
Confidence 86544444566778888 5668899999999864 2 344444443 444443 668999999999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHhhhhhhc
Q 019402 302 FLSQLVQEKPVEDCVRTGCYAANVVIQRS 330 (341)
Q Consensus 302 ~~~~l~~g~~~~~a~~~A~~~aa~~v~~~ 330 (341)
|+++|++|+++++|+++|.++....++..
T Consensus 215 ~~~~l~~g~~l~ea~~~A~~~~~~~l~~~ 243 (253)
T PRK12413 215 IASQLVKGKSPLEAVKNSKDFVYQAIQQS 243 (253)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988888764
|
|
| >PRK06427 bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.4e-17 Score=147.19 Aligned_cols=162 Identities=17% Similarity=0.187 Sum_probs=123.1
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhcCC-eEEEeCCc------HHHHhhh-hHHHHhhCCCCcEEEcCHHHHHHHHh
Q 019402 157 KAKYYYIAGFFLTVSPESIQMVAEHAAAKNK-VFMMNLSA------PFICEFF-REPQEKALPYMDYVFGNETEARTFAK 228 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~-~v~~d~~~------~~~~~~~-~~~~~~~l~~~dil~~n~~E~~~l~~ 228 (341)
+.+.+.+.- -.+.+.+..+++.+++.+. ++++||.. +.+.... ....+++++++|++++|..|++.|++
T Consensus 73 ~~~ai~iG~---l~~~~~~~~i~~~~~~~~~~~vv~DPv~~~~~~~~~~~~~~~~~~~~~ll~~~dvitpN~~Ea~~L~g 149 (266)
T PRK06427 73 RIDAVKIGM---LASAEIIETVAEALKRYPIPPVVLDPVMIAKSGDPLLADDAVAALRERLLPLATLITPNLPEAEALTG 149 (266)
T ss_pred CCCEEEECC---cCCHHHHHHHHHHHHhCCCCCEEEcCccccCCCCcCCCHHHHHHHHHhhhCcCeEEcCCHHHHHHHhC
Confidence 567777753 2357788888888888775 79999841 1111111 22234689999999999999999987
Q ss_pred hcCCCCCC-HHHHHHHHhcCCCCCCCCccEEEEeeCC--CCE----EEEeCCeEEEEecccCCCCcccCCCCcchhhHHH
Q 019402 229 VHGWETDN-VEEIALKISQWPKASGTHKRITVITQGA--DPV----VVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGG 301 (341)
Q Consensus 229 ~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~vvvt~G~--~G~----~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~ 301 (341)
....+.++ .+++++.+ .+.|++.||||.|. +|. +++.+++.++++.+++ +.+|++|+||+|+|+
T Consensus 150 ~~~~~~~~~~~~~a~~l------~~~g~~~Vvit~g~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~GaGD~f~a~ 220 (266)
T PRK06427 150 LPIADTEDEMKAAARAL------HALGCKAVLIKGGHLLDGEESVDWLFDGEGEERFSAPRI---PTKNTHGTGCTLSAA 220 (266)
T ss_pred CCCCCcHHHHHHHHHHH------HhcCCCEEEEcCCCCCCCCceeEEEEeCCcEEEEEeeeE---CCCCCCChHHHHHHH
Confidence 54333233 56788888 56788999999998 553 5666666666776544 678999999999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHhhhhhhc
Q 019402 302 FLSQLVQEKPVEDCVRTGCYAANVVIQRS 330 (341)
Q Consensus 302 ~~~~l~~g~~~~~a~~~A~~~aa~~v~~~ 330 (341)
|++++++|+++++|+++|++.+..++++.
T Consensus 221 l~~~l~~g~~l~~A~~~A~~~~~~~i~~~ 249 (266)
T PRK06427 221 IAAELAKGASLLDAVQTAKDYVTRAIRHA 249 (266)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998874
|
|
| >cd01169 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1 | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.3e-17 Score=143.79 Aligned_cols=161 Identities=17% Similarity=0.166 Sum_probs=121.8
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhc-CCeEEEeCCcH------HHHhhh-hHHHHhhCCCCcEEEcCHHHHHHHHh
Q 019402 157 KAKYYYIAGFFLTVSPESIQMVAEHAAAK-NKVFMMNLSAP------FICEFF-REPQEKALPYMDYVFGNETEARTFAK 228 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~-~~~v~~d~~~~------~~~~~~-~~~~~~~l~~~dil~~n~~E~~~l~~ 228 (341)
+.+++.+. + -.+++.+..+.+.+++. +.++++||... .+.... ......+++++|++++|..|++.|++
T Consensus 68 ~~~~i~~G-~--l~~~~~~~~i~~~~~~~~~~~vv~Dpv~~~~~~~~~~~~~~~~~~~~~ll~~~dvitpN~~Ea~~L~g 144 (242)
T cd01169 68 PVDAIKIG-M--LGSAEIIEAVAEALKDYPDIPVVLDPVMVAKSGDSLLDDDAIEALRELLLPLATLITPNLPEAELLTG 144 (242)
T ss_pred CCCEEEEC-C--CCCHHHHHHHHHHHHhCCCCcEEECCceeCCCCCcccCHHHHHHHHHHhhccCeEEeCCHHHHHHHhC
Confidence 56888874 2 23577888888888876 78899998431 111111 22334567999999999999999988
Q ss_pred hcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCC-----EEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHH
Q 019402 229 VHGWETDNVEEIALKISQWPKASGTHKRITVITQGADP-----VVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFL 303 (341)
Q Consensus 229 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G-----~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~ 303 (341)
....+..+..++++.+ ...+++.||||.|..| .+++.+++.++++.+++ +++|++|+||+|+|+|+
T Consensus 145 ~~~~~~~~~~~~~~~l------~~~g~~~Vvit~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~GaGD~f~a~l~ 215 (242)
T cd01169 145 LEIATEEDMMKAAKAL------LALGAKAVLIKGGHLPGDEAVDVLYDGGGFFEFESPRI---DTKNTHGTGCTLSSAIA 215 (242)
T ss_pred CCCCCHHHHHHHHHHH------HhcCCCEEEEecCCCCCCceeEEEEECCcEEEEeccee---CCCCCCChHHHHHHHHH
Confidence 5443333455677777 5678899999999875 36667766777776654 67999999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHhhhhhh
Q 019402 304 SQLVQEKPVEDCVRTGCYAANVVIQR 329 (341)
Q Consensus 304 ~~l~~g~~~~~a~~~A~~~aa~~v~~ 329 (341)
+++++|+++++|+++|++.-...++.
T Consensus 216 a~l~~g~~~~~A~~~A~~~~~~~i~~ 241 (242)
T cd01169 216 ANLAKGLSLEEAVREAKEYVTQAIRN 241 (242)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999988766653
|
The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction. |
| >PRK07105 pyridoxamine kinase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.5e-17 Score=148.19 Aligned_cols=163 Identities=15% Similarity=0.093 Sum_probs=118.0
Q ss_pred cceEEEEeccccccCHH---HHHHHHHHHHhcCCeEEEeCCcHH----H---HhhhhHHHHhhCCCCcEEEcCHHHHHHH
Q 019402 157 KAKYYYIAGFFLTVSPE---SIQMVAEHAAAKNKVFMMNLSAPF----I---CEFFREPQEKALPYMDYVFGNETEARTF 226 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~---~~~~~~~~~~~~~~~v~~d~~~~~----~---~~~~~~~~~~~l~~~dil~~n~~E~~~l 226 (341)
..|.++++-. .+++ .+.++++.+++.+.++++||.... | .+...+.++++++++|++++|.+|++.|
T Consensus 75 ~~~aik~G~l---~~~~~~~~v~~~~~~~~~~~~~vv~DPv~~~~~~l~~~~~~~~~~~~~~ll~~advitpN~~Ea~~L 151 (284)
T PRK07105 75 KFDAIYSGYL---GSPRQIQIVSDFIKYFKKKDLLVVVDPVMGDNGKLYQGFDQEMVEEMRKLIQKADVITPNLTEACLL 151 (284)
T ss_pred ccCEEEECcC---CCHHHHHHHHHHHHHhccCCCeEEECCccccCCcCCCCCCHHHHHHHHHHHhhCCEecCCHHHHHHH
Confidence 5787876422 2344 444445555666788999995211 1 1122345678999999999999999999
Q ss_pred HhhcCC----CCCCHHHHHHHHhcCCCCCCCCccEEEEee-----CCCCEEEEeCC--eEEEEecccCCCCcccCCCCcc
Q 019402 227 AKVHGW----ETDNVEEIALKISQWPKASGTHKRITVITQ-----GADPVVVAEDG--KVKLFPVILLPKEKLVDTNGAG 295 (341)
Q Consensus 227 ~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~-----G~~G~~~~~~~--~~~~v~~~~~~~~~vvdttGAG 295 (341)
++.... +.++..++++++ .+.|++.||||. |..|+++++++ ..++.+.+. ..+|++|||
T Consensus 152 ~g~~~~~~~~~~~~~~~~a~~l------~~~g~~~Vvvt~~~~~~g~~g~~~~~~~~~~~~~~~~~~----~~~~~~GaG 221 (284)
T PRK07105 152 LDKPYLEKSYSEEEIKQLLRKL------ADLGPKIVIITSVPFEDGKIGVAYYDRATDRFWKVFCKY----IPAHYPGTG 221 (284)
T ss_pred cCCCcCcCCCCHHHHHHHHHHH------HhcCCCEEEEcCeeeCCCeEEEEEEeCCCCeEEEEeecc----cCCCcCChh
Confidence 875321 233455677777 566889999998 67788887643 445555433 237999999
Q ss_pred hhhHHHHHHHHhcCCCHHHHHHHHHHHHhhhhhhccc
Q 019402 296 DAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGC 332 (341)
Q Consensus 296 Daf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~g~ 332 (341)
|+|+|+|++++++|+++++|+++|.+++...+++...
T Consensus 222 D~f~aa~~~~l~~g~~l~~av~~A~~~~~~~i~~~~~ 258 (284)
T PRK07105 222 DIFTSVITGSLLQGDSLPIALDRAVQFIEKGIRATLG 258 (284)
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999886533
|
|
| >PRK08176 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.5e-17 Score=145.31 Aligned_cols=164 Identities=16% Similarity=0.109 Sum_probs=116.4
Q ss_pred hcceEEEEeccccccCHHHHHHHHHHHHh--cCCeEEEeCCcH-----HH-HhhhhHHH-HhhCCCCcEEEcCHHHHHHH
Q 019402 156 EKAKYYYIAGFFLTVSPESIQMVAEHAAA--KNKVFMMNLSAP-----FI-CEFFREPQ-EKALPYMDYVFGNETEARTF 226 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~~~~~~~~~~~~~~--~~~~v~~d~~~~-----~~-~~~~~~~~-~~~l~~~dil~~n~~E~~~l 226 (341)
.+.|.++++-....-..+.+.++++..++ .+.++++||.-. .+ .....+.+ +.+++++|++++|..|++.|
T Consensus 87 ~~~d~i~~G~l~s~~~~~~i~~~l~~~~~~~~~~~vv~DPvm~d~~~~~~~~~~~~~~~~~~Ll~~advitPN~~Ea~~L 166 (281)
T PRK08176 87 RQLRAVTTGYMGSASQIKILAEWLTALRADHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQHLLPLAQGLTPNIFELEIL 166 (281)
T ss_pred ccCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCcEEeCCccccCCCCeEECccHHHHHHHHhHhhcCEeCCCHHHHHHH
Confidence 47888888542211122445555555443 467899999511 11 11122334 35889999999999999999
Q ss_pred HhhcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCC-------EEEEeCCeEEEEecccCCCCcccCCCCcchhhH
Q 019402 227 AKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADP-------VVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFV 299 (341)
Q Consensus 227 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G-------~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~ 299 (341)
++....+.++..++++++ .+.|++.||||.|..| ++++++++.+..+ .+. ..+|++|+||+|+
T Consensus 167 ~g~~~~~~~~~~~~~~~l------~~~g~~~VvIT~g~~g~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~GaGD~fa 236 (281)
T PRK08176 167 TGKPCRTLDSAIAAAKSL------LSDTLKWVVITSAAGNEENQEMQVVVVTADSVNVIS-HPR---VDTDLKGTGDLFC 236 (281)
T ss_pred hCCCCCCHHHHHHHHHHH------HhcCCCEEEEeeccCCCCCCcEEEEEEeCCceEEEe-cCc---cCCCCCChhHHHH
Confidence 875433334556777888 5678999999999988 5667666554433 222 4579999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHhhhhhh
Q 019402 300 GGFLSQLVQEKPVEDCVRTGCYAANVVIQR 329 (341)
Q Consensus 300 a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~ 329 (341)
|+|++++++|+++++|+++|+..-...++.
T Consensus 237 a~~~a~l~~g~~l~~Av~~A~~~v~~~i~~ 266 (281)
T PRK08176 237 AELVSGLLKGKALTDAAHRAGLRVLEVMRY 266 (281)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988877765
|
|
| >PRK08573 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.9e-17 Score=153.26 Aligned_cols=151 Identities=19% Similarity=0.223 Sum_probs=118.0
Q ss_pred CHHHHHHHHHHHHhcCCeEEEeCCc------HHHHhhh-hHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHHH
Q 019402 171 SPESIQMVAEHAAAKNKVFMMNLSA------PFICEFF-REPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALK 243 (341)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~v~~d~~~------~~~~~~~-~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~ 243 (341)
+.+.+..+++.+++.+.++++||.. +.+.... .....++++++|++++|.+|++.|++....+.++.+++++.
T Consensus 82 ~~e~~~~i~~~~k~~g~~vv~DPv~~~~sG~~l~~~~~~~~l~~~llp~adli~pN~~Ea~~L~g~~i~~~~d~~~aa~~ 161 (448)
T PRK08573 82 NREIIEAVAKTVSKYGFPLVVDPVMIAKSGAPLLREDAVDALIKRLLPLATVVTPNRPEAEKLTGMKIRSVEDARKAAKY 161 (448)
T ss_pred CHHHHHHHHHHHHHcCCCEEEcCccccCCCCcCCCHHHHHHHHHhhhccCEEEcCCHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 5688999999999999999999831 2222111 22345788999999999999999988544444456677777
Q ss_pred HhcCCCCCCCCccEEEEeeCC----CCE-EEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHH
Q 019402 244 ISQWPKASGTHKRITVITQGA----DPV-VVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRT 318 (341)
Q Consensus 244 l~~~~~~~~~~~~~vvvt~G~----~G~-~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~ 318 (341)
+.+ ..|++.|+||.|. +|+ +++.++..++++.+++ +++|++||||+|+|+|++++++|+++++|+++
T Consensus 162 L~~-----~~G~~~VvVt~G~~~g~~~~~~~~~~~~~~~~~~~~v---~~~dt~GAGDaFsAa~aa~l~~G~~l~eAl~~ 233 (448)
T PRK08573 162 IVE-----ELGAEAVVVKGGHLEGEEAVDVLYHNGTFREFRAPRV---ESGCTHGTGCSFSAAIAAGLAKGLDPEEAIKT 233 (448)
T ss_pred HHH-----HcCCCEEEEecccCCCCceeEEEEECCeEEEEEecCc---CCCCCCChHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 721 3578899999885 344 4456666777776654 78999999999999999999999999999999
Q ss_pred HHHHHhhhhhh
Q 019402 319 GCYAANVVIQR 329 (341)
Q Consensus 319 A~~~aa~~v~~ 329 (341)
|+.+....+++
T Consensus 234 A~~~~~~al~~ 244 (448)
T PRK08573 234 AKKFITMAIKY 244 (448)
T ss_pred HHHHHHHHHHH
Confidence 99999999984
|
|
| >PRK12616 pyridoxal kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.7e-16 Score=140.28 Aligned_cols=161 Identities=16% Similarity=0.143 Sum_probs=120.2
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhcCC-eEEEeCCcHHH------Hhh-hhHHHHhhCCCCcEEEcCHHHHHHHHh
Q 019402 157 KAKYYYIAGFFLTVSPESIQMVAEHAAAKNK-VFMMNLSAPFI------CEF-FREPQEKALPYMDYVFGNETEARTFAK 228 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~-~v~~d~~~~~~------~~~-~~~~~~~~l~~~dil~~n~~E~~~l~~ 228 (341)
+.|.+.+.- -.+.+.+..+.+.+++.+. ++++||-.... ... .......+++++|++++|..|++.|++
T Consensus 74 ~~~aikiG~---l~s~~~i~~i~~~l~~~~~~~vV~DPV~~~~~g~~~l~~~~~~~l~~~L~~~advitpN~~Ea~~L~g 150 (270)
T PRK12616 74 GVDAMKTGM---LPTVDIIELAADTIKEKQLKNVVIDPVMVCKGANEVLYPEHAEALREQLAPLATVITPNLFEAGQLSG 150 (270)
T ss_pred CCCEEEECC---CCCHHHHHHHHHHHHhcCCCCEEEccceecCCCCcccCHHHHHHHHHHhhccceEecCCHHHHHHHcC
Confidence 356677642 2356788888888887764 58899853110 111 122233488899999999999999987
Q ss_pred h-cCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCE------EEEeCCeEEEEecccCCCCcccCCCCcchhhHHH
Q 019402 229 V-HGWETDNVEEIALKISQWPKASGTHKRITVITQGADPV------VVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGG 301 (341)
Q Consensus 229 ~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~------~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~ 301 (341)
. ...+.++.+++++++ .+.|++.||||.|..|. ++++++..++++.+++ +..|++||||+|+|+
T Consensus 151 ~~~~~~~~~~~~aa~~l------~~~G~~~VvVt~G~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~t~GaGD~fsaa 221 (270)
T PRK12616 151 MGEIKTVEQMKEAAKKI------HELGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMI---DTPYTHGAGCTFSAA 221 (270)
T ss_pred CCCCCCHHHHHHHHHHH------HHcCCCEEEEeCCCCCcCCceEEEEEECCeEEEEEeeee---CCCCCCcHHHHHHHH
Confidence 4 233334566778888 56788999999998762 5566666666665544 778999999999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHhhhhhh
Q 019402 302 FLSQLVQEKPVEDCVRTGCYAANVVIQR 329 (341)
Q Consensus 302 ~~~~l~~g~~~~~a~~~A~~~aa~~v~~ 329 (341)
|+++|++|+++++|+++|.......++.
T Consensus 222 laa~l~~g~~l~~Av~~A~~~~~~~i~~ 249 (270)
T PRK12616 222 VTAELAKGSEVKEAIYAAKEFITAAIKE 249 (270)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999888876
|
|
| >PTZ00344 pyridoxal kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.1e-14 Score=128.64 Aligned_cols=158 Identities=19% Similarity=0.223 Sum_probs=106.3
Q ss_pred EEEEeccccccCHHHHHHHHHHH---HhcC--CeEEEeCCc----HHH-HhhhhHHHHhhCCCCcEEEcCHHHHHHHHhh
Q 019402 160 YYYIAGFFLTVSPESIQMVAEHA---AAKN--KVFMMNLSA----PFI-CEFFREPQEKALPYMDYVFGNETEARTFAKV 229 (341)
Q Consensus 160 ~v~i~~~~~~~~~~~~~~~~~~~---~~~~--~~v~~d~~~----~~~-~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~ 229 (341)
.++++|+.. +.+.+..+++.+ ++.+ .++++||-- ..| .+...+.+.++++++|++++|++|++.|++.
T Consensus 79 ~~v~sG~l~--~~~~~~~i~~~l~~~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~ll~~~dii~pN~~E~~~L~g~ 156 (296)
T PTZ00344 79 TYVLTGYIN--SADILREVLATVKEIKELRPKLIFLCDPVMGDDGKLYVKEEVVDAYRELIPYADVITPNQFEASLLSGV 156 (296)
T ss_pred CEEEECCCC--CHHHHHHHHHHHHHHHHhCCCceEEECCccccCCceEeCHHHHHHHHHHhhhCCEEeCCHHHHHHHhCC
Confidence 455556533 355555544444 5555 478889532 112 1223455678899999999999999999875
Q ss_pred cCCCCCCHHHHHHHHhcCCCCCCCCccEEEEe---eCCCC----EEEEe--C----CeEEEEecccCCCCcccCCCCcch
Q 019402 230 HGWETDNVEEIALKISQWPKASGTHKRITVIT---QGADP----VVVAE--D----GKVKLFPVILLPKEKLVDTNGAGD 296 (341)
Q Consensus 230 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt---~G~~G----~~~~~--~----~~~~~v~~~~~~~~~vvdttGAGD 296 (341)
...+.++..++++.+ ...|++.|||| .|.+| +++.. . ++.+.+..+++ + ++++||||
T Consensus 157 ~~~~~~~~~~~~~~l------~~~g~~~VvVTg~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~---~-~~~~GaGD 226 (296)
T PTZ00344 157 EVKDLSDALEAIDWF------HEQGIPVVVITSFREDEDPTHLRFLLSCRDKDTKNNKRFTGKVPYI---E-GRYTGTGD 226 (296)
T ss_pred CCCCHHHHHHHHHHH------HHhCCCEEEEEeecCCCCCCcEEEEEEeccccCCCceeEEEecccc---C-CCCCCchH
Confidence 432333455677777 45678999999 55556 44432 1 33455554433 4 57799999
Q ss_pred hhHHHHHHHHhcCCCHHHHHHHHHHHHhhhhhhc
Q 019402 297 AFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRS 330 (341)
Q Consensus 297 af~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~ 330 (341)
+|+|+|++.+.+| ++++|+++|.+....+++..
T Consensus 227 ~f~A~~~a~l~~g-~~~~a~~~A~a~~~~~i~~~ 259 (296)
T PTZ00344 227 LFAALLLAFSHQH-PMDLAVGKAMGVLQDIIKAT 259 (296)
T ss_pred HHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHH
Confidence 9999999888888 99999999999888777653
|
|
| >KOG3009 consensus Predicted carbohydrate kinase, contains PfkB domain [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.7e-14 Score=128.80 Aligned_cols=244 Identities=19% Similarity=0.225 Sum_probs=161.2
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
+=+++|...+|.....|++ -+.+.........+..||.+.|.|.++++ + |.++.||+
T Consensus 342 KPv~vGa~i~D~~~k~d~d--------------------~K~dG~sy~~~~~Qa~GGVarN~A~a~~~-l--g~d~~liS 398 (614)
T KOG3009|consen 342 KPVSVGATIVDFEAKTDED--------------------VKDDGGSYNGQVVQAMGGVARNHADALAR-L--GCDSVLIS 398 (614)
T ss_pred CceeecceEEEeEEeeccc--------------------ccccCCcccchhhhhccchhhhHHHHHHH-h--cCCeeEEE
Confidence 4489999999999999852 11222233356678999999999999998 3 48999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCCchhHhhhhcceEEEEec
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAG 165 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~ 165 (341)
++|+|..+++.+.. .+. ..+.. +.+.++|++++++
T Consensus 399 avG~d~n~~~~~~~----------------------------~~~------------~~e~~-----~dl~~a~~I~~Ds 433 (614)
T KOG3009|consen 399 AVGDDNNGHFFRQN----------------------------SHK------------IVESN-----EDLLSADFILLDS 433 (614)
T ss_pred EeccCCcchhhhhh----------------------------hhh------------hhhhh-----hhhhcCCEEEEcC
Confidence 99999322111100 000 00111 2233899999988
Q ss_pred cccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCC-CCcEEEcCHHHHHHHHhhcC--CC------CCC
Q 019402 166 FFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP-YMDYVFGNETEARTFAKVHG--WE------TDN 236 (341)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~-~~dil~~n~~E~~~l~~~~~--~~------~~~ 236 (341)
++++..+..+++ ++.+..+|+|+|.+.... ...++-++. .++.+++|..|+-.....+. ++ .+.
T Consensus 434 ---NiS~~~Ma~il~-ak~~k~~V~fEPTd~~k~---~K~fk~l~v~~i~~i~PN~~Ell~a~k~~~v~~nps~~q~~~~ 506 (614)
T KOG3009|consen 434 ---NISVPVMARILE-AKKHKKQVWFEPTDIDKV---KKVFKTLLVGAITAISPNANELLKAAKLCHVSVNPSVIQTADG 506 (614)
T ss_pred ---CCCHHHHHHHHH-hhhccCceEecCCCchhh---hhhhhhcceeeEEeeCCCHHHHHHHhhcCceeeChhhhccchH
Confidence 899999999999 899999999999764421 112222222 47999999999843333222 11 122
Q ss_pred HHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCC-----eEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCC
Q 019402 237 VEEIALKISQWPKASGTHKRITVITQGADPVVVAEDG-----KVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKP 311 (341)
Q Consensus 237 ~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~-----~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~ 311 (341)
..+.++.+... .......+|+|...+|+++.-.+ +....+++.. .-++++..||||+|.++++.+++++.+
T Consensus 507 ~~~~~~~~~~k---~~~~~s~~I~tl~~~G~l~~yr~k~g~l~~~s~~p~~~-~~n~vsvsgaGdsf~~g~i~~l~~~~~ 582 (614)
T KOG3009|consen 507 VLELIEKEKTK---LLLNTSIFIVTLANKGSLVVYRNKLGQLEFQSLPPPLQ-MNNVVSVSGAGDSFNSGVIAGLAHNKT 582 (614)
T ss_pred HHHHHHHHHHH---hhcccceEEEEeccCceEEEecCCCCCcccccCCCccc-ccceeEeccCCcccccceeehhhcCcc
Confidence 22233333221 23445679999999999774222 1223333322 337899999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhh
Q 019402 312 VEDCVRTGCYAANVVIQ 328 (341)
Q Consensus 312 ~~~a~~~A~~~aa~~v~ 328 (341)
+.+++.-+..++....+
T Consensus 583 v~es~~gg~~~~ralls 599 (614)
T KOG3009|consen 583 VVESLQGGQECARALLS 599 (614)
T ss_pred hHhhccccHHHHHHHHh
Confidence 99999999555544433
|
|
| >PLN02898 HMP-P kinase/thiamin-monophosphate pyrophosphorylase | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.6e-14 Score=135.32 Aligned_cols=162 Identities=13% Similarity=0.102 Sum_probs=120.3
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhcCCe-EEEeCCc------HHHHhhhhHHH-HhhCCCCcEEEcCHHHHHHHHh
Q 019402 157 KAKYYYIAGFFLTVSPESIQMVAEHAAAKNKV-FMMNLSA------PFICEFFREPQ-EKALPYMDYVFGNETEARTFAK 228 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~-v~~d~~~------~~~~~~~~~~~-~~~l~~~dil~~n~~E~~~l~~ 228 (341)
+.+.+.+.- -.+.+.+..+++.+++.+.+ +++||-. ........+.+ .++++++|+++||..|++.|++
T Consensus 78 ~~~aik~G~---l~~~~~i~~i~~~l~~~~~~~vVlDPV~~~~~G~~l~~~~~~~~l~~~Ll~~adiitPN~~Ea~~L~g 154 (502)
T PLN02898 78 PVDVVKTGM---LPSAEIVKVLCQALKEFPVKALVVDPVMVSTSGDVLAGPSILSALREELLPLATIVTPNVKEASALLG 154 (502)
T ss_pred CCCEEEECC---cCCHHHHHHHHHHHHhCCCCCEEEccccccCCCCccCCHHHHHHHHHhhhccCeEEcCCHHHHHHHhC
Confidence 356666642 23578888899988888775 8999832 11111122223 4688999999999999999986
Q ss_pred hc-CCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCC------EEEEeCCeEEEEecccCCCCcccCCCCcchhhHHH
Q 019402 229 VH-GWETDNVEEIALKISQWPKASGTHKRITVITQGADP------VVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGG 301 (341)
Q Consensus 229 ~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G------~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~ 301 (341)
.. ..+.++..++++.+ .+.|++.||||.|..+ .++++++..++++.+++ +.+|++|+||+|+|+
T Consensus 155 ~~~~~~~~~~~~~a~~l------~~~G~~~VvItgg~~~~~~~~~~~l~~~~~~~~~~~~~i---~~~~t~GaGD~fsaa 225 (502)
T PLN02898 155 GDPLETVADMRSAAKEL------HKLGPRYVLVKGGHLPDSLDAVDVLYDGTEFHELRSSRI---KTRNTHGTGCTLASC 225 (502)
T ss_pred CCCCCCHHHHHHHHHHH------HhcCCCEEEEcCCCCCCCCcceEEEEcCCeEEEEeccee---CCCCCCchhhhHHHH
Confidence 32 22234566777887 5678899999998753 35666666666665544 678999999999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHhhhhhhc
Q 019402 302 FLSQLVQEKPVEDCVRTGCYAANVVIQRS 330 (341)
Q Consensus 302 ~~~~l~~g~~~~~a~~~A~~~aa~~v~~~ 330 (341)
|++++++|+++++|+++|..+....+...
T Consensus 226 iaa~l~~G~~l~eAv~~A~~~v~~ai~~~ 254 (502)
T PLN02898 226 IAAELAKGSDMLSAVKVAKRYVETALEYS 254 (502)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999864
|
|
| >cd01171 YXKO-related B | Back alignment and domain information |
|---|
Probab=99.57 E-value=6.4e-14 Score=122.96 Aligned_cols=162 Identities=17% Similarity=0.062 Sum_probs=115.3
Q ss_pred hhhhcceEEEEeccccccCH-HHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcC
Q 019402 153 SIVEKAKYYYIAGFFLTVSP-ESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHG 231 (341)
Q Consensus 153 ~~~~~~~~v~i~~~~~~~~~-~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~ 231 (341)
..+.+.|++++.+. ++. +.+..+++.+++.+.++++|+.+......... . .+.+..++++||..|++.|++...
T Consensus 73 ~~~~~~d~v~ig~g---l~~~~~~~~i~~~~~~~~~pvVlDa~~~~~~~~~~~-~-~~~~~~~iltPn~~E~~~L~g~~~ 147 (254)
T cd01171 73 ELLERADAVVIGPG---LGRDEEAAEILEKALAKDKPLVLDADALNLLADEPS-L-IKRYGPVVLTPHPGEFARLLGALV 147 (254)
T ss_pred hhhccCCEEEEecC---CCCCHHHHHHHHHHHhcCCCEEEEcHHHHHhhcChh-h-hccCCCEEECCCHHHHHHHhCCCh
Confidence 34567899999762 333 77888899999889999999875432111100 1 245678999999999999987532
Q ss_pred CC-CCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCC
Q 019402 232 WE-TDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEK 310 (341)
Q Consensus 232 ~~-~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~ 310 (341)
.+ .++..++++++. +.+ ..+|+..|. +.++++++..++++.... +.++++|+||+|+|.+.+.+++|+
T Consensus 148 ~~~~~~~~~~a~~l~------~~~-~~~vvlkG~-~~~i~~~~~~~~~~~~~~---~~~~~~GaGD~lag~iaa~la~g~ 216 (254)
T cd01171 148 EEIQADRLAAAREAA------AKL-GATVVLKGA-VTVIADPDGRVYVNPTGN---PGLATGGSGDVLAGIIAALLAQGL 216 (254)
T ss_pred hhhhhHHHHHHHHHH------HHc-CcEEEEcCC-CCEEECCCCcEEEECCCC---cccccCchHHHHHHHHHHHHHcCC
Confidence 22 223456677773 333 345666675 666666544455554433 788999999999888888888999
Q ss_pred CHHHHHHHHHHHHhhhhhhc
Q 019402 311 PVEDCVRTGCYAANVVIQRS 330 (341)
Q Consensus 311 ~~~~a~~~A~~~aa~~v~~~ 330 (341)
++++|+++|+.+.+.+.+..
T Consensus 217 ~~~eA~~~A~~~~~~a~~~~ 236 (254)
T cd01171 217 SPLEAAALAVYLHGLAGDLA 236 (254)
T ss_pred CHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988764
|
subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily. |
| >PTZ00347 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=8.9e-14 Score=133.43 Aligned_cols=163 Identities=15% Similarity=0.168 Sum_probs=115.7
Q ss_pred hhhcceEEEE-eccccccCHHHHHHHHHHHHhcCCeEEEeCCcH------HHHhhh----hHHH-HhhCCCCcEEEcCHH
Q 019402 154 IVEKAKYYYI-AGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAP------FICEFF----REPQ-EKALPYMDYVFGNET 221 (341)
Q Consensus 154 ~~~~~~~v~i-~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~------~~~~~~----~~~~-~~~l~~~dil~~n~~ 221 (341)
.+.+.++.++ .|+ -.+.+.+..+++.++ +.++++||-.. .+.... .+.+ .++++.+|++++|..
T Consensus 294 l~~d~~~~~Ik~G~--l~s~e~i~~i~~~l~--~~~vV~DPV~~~~~G~~l~~~~~~~~~~~~~~~~Ll~~advitPN~~ 369 (504)
T PTZ00347 294 VMSDFNISVVKLGL--VPTARQLEIVIEKLK--NLPMVVDPVLVATSGDDLVAQKNADDVLAMYKERIFPMATIITPNIP 369 (504)
T ss_pred HHhCCCCCEEEECC--cCCHHHHHHHHHHhc--CCCEEEcccceeCCCCcccchhHHHHHHHHHHHhccCcceEEeCCHH
Confidence 3444444444 443 235677888878775 56789997321 111111 1222 368899999999999
Q ss_pred HHHHHHhhc-CCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCC-------EEEEeC--CeEEEEecccCCCCcccCC
Q 019402 222 EARTFAKVH-GWETDNVEEIALKISQWPKASGTHKRITVITQGADP-------VVVAED--GKVKLFPVILLPKEKLVDT 291 (341)
Q Consensus 222 E~~~l~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G-------~~~~~~--~~~~~v~~~~~~~~~vvdt 291 (341)
|++.|++.. ..+.++..++++.+ .+.|++.||||.|..| .+++.+ +..++++.+++ +++|+
T Consensus 370 Ea~~L~g~~~~~~~~~~~~aa~~l------~~~G~~~VvVtgg~~~~~~~~~~~~l~~~~~~~~~~~~~~~i---~~~~~ 440 (504)
T PTZ00347 370 EAERILGRKEITGVYEARAAAQAL------AQYGSRYVLVKGGHDLIDPEACRDVLYDREKDRFYEFTANRI---ATINT 440 (504)
T ss_pred HHHHHhCCCCCCCHHHHHHHHHHH------HhcCCCEEEEeCCCCCcCCCcceEEEEcCCCCeEEEEEeeeE---CCCCC
Confidence 999998752 22334566777777 5678999999999863 344442 35566776544 78899
Q ss_pred CCcchhhHHHHHHHHhcCCCHHHHHHHHHHHHhhhhhh
Q 019402 292 NGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQR 329 (341)
Q Consensus 292 tGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~ 329 (341)
+|+||+|+|+|++++++|+++++|+++|.+.-...+.+
T Consensus 441 ~GaGD~fsaaiaa~la~G~~l~eAv~~A~~~v~~~i~~ 478 (504)
T PTZ00347 441 HGTGCTLASAISSFLARGYTVPDAVERAIGYVHEAIVR 478 (504)
T ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999998888777765
|
|
| >PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2 | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.6e-13 Score=118.24 Aligned_cols=161 Identities=19% Similarity=0.182 Sum_probs=114.8
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcH------HHHhhhhHHHH-hhCCCCcEEEcCHHHHHHHHhh
Q 019402 157 KAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAP------FICEFFREPQE-KALPYMDYVFGNETEARTFAKV 229 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~------~~~~~~~~~~~-~~l~~~dil~~n~~E~~~l~~~ 229 (341)
+.|.+.++- -.+.+.+..+.+.++..+.++++||--. ...+...+.++ ++++.+|++.||..|++.|++.
T Consensus 60 ~~~aikiG~---l~~~~~v~~i~~~l~~~~~~vV~DPVm~~~~g~~~~~~~~~~~~~~~Llp~AdiitPN~~Ea~~L~g~ 136 (246)
T PF08543_consen 60 KFDAIKIGY---LGSAEQVEIIADFLKKPKIPVVLDPVMGDSGGYYYVDPDVVEAMREELLPLADIITPNLTEAELLTGR 136 (246)
T ss_dssp C-SEEEE-S----SSHHHHHHHHHHHHHTTTEEEEE---EETTTECTSSHHHHHHHHHHCGGG-SEEE-BHHHHHHHHTS
T ss_pred cccEEEEcc---cCCchhhhhHHHHHhccCCCEEEecccccCCCCcCCCHHHHHHHHhccCCcCeEEeCCHHHHHHHhCC
Confidence 668888753 2356777777777777778999998321 11122233344 4999999999999999999986
Q ss_pred cCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCC---C----EEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHH
Q 019402 230 HGWETDNVEEIALKISQWPKASGTHKRITVITQGAD---P----VVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGF 302 (341)
Q Consensus 230 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~---G----~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~ 302 (341)
...+.++..+++++| .+.|++.|+||-+.. . .+++.+++.+.++.+.. +..+..|.||.|+|++
T Consensus 137 ~i~~~~~~~~~~~~l------~~~G~~~VvItg~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~GTGd~fss~l 207 (246)
T PF08543_consen 137 EINSEEDIEEAAKAL------LALGPKNVVITGGHLDGDEGIITDVLYDGGEFYWLSSPRI---PTGSFHGTGDLFSSAL 207 (246)
T ss_dssp --SSHHHHHHHHHHH------HHTS-SEEEEEEEEGGSSCEEEEEEEETTSEEEEEEEEEE---CTSGCTTHHHHHHHHH
T ss_pred CCCChHhHHHHHHHH------HHhCCceEEEeeeccccccccccceeeeccceeecceeEE---cCCCCCCchhHHHHHH
Confidence 555666778888888 567899999998763 2 34456677776665544 3467899999999999
Q ss_pred HHHHhcCCCHHHHHHHHHHHHhhhhhh
Q 019402 303 LSQLVQEKPVEDCVRTGCYAANVVIQR 329 (341)
Q Consensus 303 ~~~l~~g~~~~~a~~~A~~~aa~~v~~ 329 (341)
++.|++|+++++|++.|...-...+++
T Consensus 208 aa~l~~g~~l~~Av~~A~~~v~~~i~~ 234 (246)
T PF08543_consen 208 AAFLAKGYSLEEAVEKAKNFVRRAIKN 234 (246)
T ss_dssp HHHHHTTSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888877764
|
7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D .... |
| >COG0351 ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.9e-13 Score=113.73 Aligned_cols=149 Identities=20% Similarity=0.228 Sum_probs=119.5
Q ss_pred CHHHHHHHHHHHHhcC-CeEEEeCC------cHHHHhhhhH-HHHhhCCCCcEEEcCHHHHHHHHhh-cCCCCCCHHHHH
Q 019402 171 SPESIQMVAEHAAAKN-KVFMMNLS------APFICEFFRE-PQEKALPYMDYVFGNETEARTFAKV-HGWETDNVEEIA 241 (341)
Q Consensus 171 ~~~~~~~~~~~~~~~~-~~v~~d~~------~~~~~~~~~~-~~~~~l~~~dil~~n~~E~~~l~~~-~~~~~~~~~~~~ 241 (341)
+++.+..+.+.+++.+ .++++||- .+...++..+ ..++++++++++.||..|++.|++. ...+.+++.+++
T Consensus 83 ~~eiie~va~~l~~~~~~~vV~DPVmvaksG~~Ll~~~a~~~l~~~LlP~a~vvTPNl~EA~~L~g~~~i~~~~d~~~a~ 162 (263)
T COG0351 83 SAEIIEVVAEKLKKYGIGPVVLDPVMVAKSGDPLLDEEAVEALREELLPLATVVTPNLPEAEALSGLPKIKTEEDMKEAA 162 (263)
T ss_pred CHHHHHHHHHHHHhcCCCcEEECceEEEcCCCcccChHHHHHHHHHhhccCeEecCCHHHHHHHcCCCccCCHHHHHHHH
Confidence 5788999999999998 77999982 2222233333 3448999999999999999999994 656677778887
Q ss_pred HHHhcCCCCCCCCccEEEEeeCCCC----EEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHH
Q 019402 242 LKISQWPKASGTHKRITVITQGADP----VVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVR 317 (341)
Q Consensus 242 ~~l~~~~~~~~~~~~~vvvt~G~~G----~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~ 317 (341)
+.+ .+.|++.|+|+-|... -++|.++..+.++.+.+ +-.++-|+|++|+|++.+.|++|.++++|++
T Consensus 163 ~~i------~~~g~~~VliKGGH~~~~~~D~l~~~~~~~~f~~~ri---~t~~tHGTGCTlSaAIaa~LA~G~~l~~AV~ 233 (263)
T COG0351 163 KLL------HELGAKAVLIKGGHLEGEAVDVLYDGGSFYTFEAPRI---PTKNTHGTGCTLSAAIAANLAKGLSLEEAVK 233 (263)
T ss_pred HHH------HHhCCCEEEEcCCCCCCCceeEEEcCCceEEEecccc---CCCCCCCccHHHHHHHHHHHHcCCCHHHHHH
Confidence 777 6778999999987633 35566666666666544 6778999999999999999999999999999
Q ss_pred HHHHHHhhhhh
Q 019402 318 TGCYAANVVIQ 328 (341)
Q Consensus 318 ~A~~~aa~~v~ 328 (341)
.|-..-...++
T Consensus 234 ~Ak~fv~~AI~ 244 (263)
T COG0351 234 KAKEFVTRAIR 244 (263)
T ss_pred HHHHHHHHHHh
Confidence 99998888887
|
|
| >PRK09517 multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.6e-13 Score=134.51 Aligned_cols=161 Identities=16% Similarity=0.166 Sum_probs=116.7
Q ss_pred ceEEEEeccccccCHHHHHHHHHHHHhc-CCeEEEeCCcH------HHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhc
Q 019402 158 AKYYYIAGFFLTVSPESIQMVAEHAAAK-NKVFMMNLSAP------FICEFFREPQEKALPYMDYVFGNETEARTFAKVH 230 (341)
Q Consensus 158 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~-~~~v~~d~~~~------~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~ 230 (341)
.+.+-++- -.+.+.+..+++.+++. +.++++||... .+.....+.+.++++.+|++++|..|++.|++..
T Consensus 311 ~~aiKiGm---L~s~e~v~~i~~~l~~~~~~~vVlDPV~~~~sG~~l~~~~~~~~l~~Llp~adlItPN~~Ea~~L~g~~ 387 (755)
T PRK09517 311 VDAVKLGM---LGSADTVDLVASWLGSHEHGPVVLDPVMVATSGDRLLDADATEALRRLAVHVDVVTPNIPELAVLCGEA 387 (755)
T ss_pred CCEEEECC---CCCHHHHHHHHHHHHhCCCCCEEEecccccCCCCCCCCHHHHHHHHHHhCcccCccCCHHHHHHHhCCC
Confidence 46666642 23567888888888874 46699998421 1111223445679999999999999999998742
Q ss_pred -CCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCC------CCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHH
Q 019402 231 -GWETDNVEEIALKISQWPKASGTHKRITVITQGA------DPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFL 303 (341)
Q Consensus 231 -~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~------~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~ 303 (341)
..+.++..++++.+ .+.+...||||.|. .|+++..++..++++.+++ +.+|++|+||+|+|+|+
T Consensus 388 ~~~~~~d~~~aa~~L------~~~~g~~VVVkgGh~~~~~~~~~l~~~~~~~~~~~~~~v---~~~~t~GaGDtfsaaia 458 (755)
T PRK09517 388 PAITMDEAIAQARGF------ARTHGTIVIVKGGHLTGDLADNAVVRPDGSVHQVENPRV---NTTNSHGTGCSLSAALA 458 (755)
T ss_pred CCCCHHHHHHHHHHH------HHhcCCEEEEcCCcCCCCccceEEEeCCCeEEEEeeccc---CCCCCcChHHHHHHHHH
Confidence 12233455667777 33223479999883 5677666666667776554 78999999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHhhhhhhc
Q 019402 304 SQLVQEKPVEDCVRTGCYAANVVIQRS 330 (341)
Q Consensus 304 ~~l~~g~~~~~a~~~A~~~aa~~v~~~ 330 (341)
++|++|+++++|+++|...-...+...
T Consensus 459 a~La~G~sl~eAv~~A~~~v~~~i~~a 485 (755)
T PRK09517 459 TLIAAGESVEKALEWATRWLNEALRHA 485 (755)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999888888663
|
|
| >cd01170 THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.2e-12 Score=113.55 Aligned_cols=167 Identities=14% Similarity=0.105 Sum_probs=114.7
Q ss_pred hHhhhhcceEEEEecccc-ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCC--CCcEEEcCHHHHHHHH
Q 019402 151 IWSIVEKAKYYYIAGFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP--YMDYVFGNETEARTFA 227 (341)
Q Consensus 151 ~~~~~~~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~--~~dil~~n~~E~~~l~ 227 (341)
..+.++++|++++..-.+ +...+.+..+++.+++.++++++|+..........+.+.+++. .+|++++|..|+..|+
T Consensus 43 ~~~~l~~~d~vvi~~G~l~~~~~~~i~~~~~~~~~~~~pvVlDp~~~~~~~~~~~~~~~ll~~~~~~ilTPN~~Ea~~L~ 122 (242)
T cd01170 43 VEELAKIAGALVINIGTLTSEQIEAMLKAGKAANQLGKPVVLDPVGVGATSFRTEVAKELLAEGQPTVIRGNASEIAALA 122 (242)
T ss_pred HHHHHHHcCcEEEeCCCCChHHHHHHHHHHHHHHhcCCCEEEcccccCcchhHHHHHHHHHhcCCCeEEcCCHHHHHHHh
Confidence 446788999999963221 1122556666677888899999999632211111122344555 4999999999999999
Q ss_pred hhcCCC---------CCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhh
Q 019402 228 KVHGWE---------TDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAF 298 (341)
Q Consensus 228 ~~~~~~---------~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf 298 (341)
+..... .++..++++++. ..+...|++| |.... ++++++.++++..+. .+.++.|+||++
T Consensus 123 g~~~~~~~~~~~~~~~~~~~~aa~~l~------~~~~~~Vllk-G~~d~-l~~~~~~~~~~~~~~---~~~~v~GtGdtL 191 (242)
T cd01170 123 GLTGLGKGVDSSSSDEEDALELAKALA------RKYGAVVVVT-GEVDY-ITDGERVVVVKNGHP---LLTKITGTGCLL 191 (242)
T ss_pred CCCCCcCcccCCCcchHHHHHHHHHHH------HHhCCEEEEE-CCCcE-EEECCEEEEEeCCCc---cccCCCchHHHH
Confidence 754321 235667777773 3334568888 66554 556777777764322 345568999999
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHhhhhh
Q 019402 299 VGGFLSQLVQEKPVEDCVRTGCYAANVVIQ 328 (341)
Q Consensus 299 ~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~ 328 (341)
+|++.+.+++|.++.+|+..|...-+..+.
T Consensus 192 a~aiAa~LA~g~~~~~A~~~A~~~~~~a~~ 221 (242)
T cd01170 192 GAVIAAFLAVGDDPLEAAVSAVLVYGIAGE 221 (242)
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999776666654
|
A reaction that allows cells to recycle Thz into the thiamine biosynthesis pathway, as an alternative to its synthesis from cysteine, tyrosine and 1-deoxy-D-xylulose-5-phosphate. |
| >PRK14713 multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=8.1e-13 Score=127.33 Aligned_cols=158 Identities=15% Similarity=0.109 Sum_probs=106.9
Q ss_pred ceEEEEeccccccCHHHHHHHHHHHHhcC-CeEEEeCCc------HHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhc
Q 019402 158 AKYYYIAGFFLTVSPESIQMVAEHAAAKN-KVFMMNLSA------PFICEFFREPQEKALPYMDYVFGNETEARTFAKVH 230 (341)
Q Consensus 158 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~-~~v~~d~~~------~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~ 230 (341)
.+.+.++- -.+.+.+..+.+.+++.. .++++||-- ..+.+...+.++++++++|++++|..|++.|++..
T Consensus 99 ~~aikiG~---l~s~~~i~~v~~~l~~~~~~~vVlDPv~~~~~G~~l~~~~~~~~~~~Ll~~advItPN~~Ea~~Ltg~~ 175 (530)
T PRK14713 99 VDAVKIGM---LGDAEVIDAVRTWLAEHRPPVVVLDPVMVATSGDRLLEEDAEAALRELVPRADLITPNLPELAVLLGEP 175 (530)
T ss_pred CCEEEECC---cCCHHHHHHHHHHHHhCCCCCEEECCcccCCCCCCCCCHHHHHHHHHHhhhhheecCChHHHHHHhCCC
Confidence 46666632 124455555555555543 358889832 11222234556779999999999999999998743
Q ss_pred C-CCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCC------CEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHH
Q 019402 231 G-WETDNVEEIALKISQWPKASGTHKRITVITQGAD------PVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFL 303 (341)
Q Consensus 231 ~-~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~------G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~ 303 (341)
. .+.++..++++++ ...+...||||.|.. ++++..+++.++++.+++ +.+|++|+||+|+|+|+
T Consensus 176 ~~~~~~d~~~aa~~L------~~~~g~~VvItgG~~~~~~~~d~~~~~~~~~~~~~~~~v---~~~~t~GaGD~fsaala 246 (530)
T PRK14713 176 PATTWEEALAQARRL------AAETGTTVLVKGGHLDGQRAPDALVGPDGAVTEVPGPRV---DTRNTHGTGCSLSSALA 246 (530)
T ss_pred CCCCHHHHHHHHHHH------HHhcCCEEEEeCCCCCCCcceEEEEcCCCeEEEEeeeee---CCCCCCcHHHHHHHHHH
Confidence 2 1233455566777 333345799998863 234444444666665544 78899999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHhhhh
Q 019402 304 SQLVQEKPVEDCVRTGCYAANVVI 327 (341)
Q Consensus 304 ~~l~~g~~~~~a~~~A~~~aa~~v 327 (341)
++|++|+++++|+++|...-...+
T Consensus 247 a~La~G~~l~eAv~~A~~~v~~~i 270 (530)
T PRK14713 247 TRLGRGGDWAAALRWATAWLHGAI 270 (530)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999998443333
|
|
| >PLN02978 pyridoxal kinase | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.2e-12 Score=115.92 Aligned_cols=162 Identities=11% Similarity=0.060 Sum_probs=108.1
Q ss_pred ceEEEEeccccccCHHHHHHHHHHHHh--cCCeEEEeCCcH----HH-HhhhhHHHH-hhCCCCcEEEcCHHHHHHHHhh
Q 019402 158 AKYYYIAGFFLTVSPESIQMVAEHAAA--KNKVFMMNLSAP----FI-CEFFREPQE-KALPYMDYVFGNETEARTFAKV 229 (341)
Q Consensus 158 ~~~v~i~~~~~~~~~~~~~~~~~~~~~--~~~~v~~d~~~~----~~-~~~~~~~~~-~~l~~~dil~~n~~E~~~l~~~ 229 (341)
.|.+.+.-.......+.+.++++.+++ .+.++++||... .+ .....+.++ .+++++|++++|..|++.|++.
T Consensus 87 ~~ai~~G~l~s~~~~~~v~~~l~~~~~~~~~~~vvlDPvm~d~G~l~~~~~~~~~~~~~ll~~adiitPN~~Ea~~L~g~ 166 (308)
T PLN02978 87 YTHLLTGYIGSVSFLRTVLRVVKKLRSVNPNLTYVCDPVLGDEGKLYVPPELVPVYREKVVPLATMLTPNQFEAEQLTGI 166 (308)
T ss_pred cCEEEecccCCHHHHHHHHHHHHHHHHhCCCCeEEECCcccCCCCccCChhHHHHHHHHHHhhCCeeccCHHHHHHHhCC
Confidence 566655422122234667777787776 346788898521 11 111223344 5899999999999999999875
Q ss_pred cCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCC-CCEEE-Ee--------CCeEEEEecccCCCCcccCCCCcchhhH
Q 019402 230 HGWETDNVEEIALKISQWPKASGTHKRITVITQGA-DPVVV-AE--------DGKVKLFPVILLPKEKLVDTNGAGDAFV 299 (341)
Q Consensus 230 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~-~G~~~-~~--------~~~~~~v~~~~~~~~~vvdttGAGDaf~ 299 (341)
...+.++..++++++ ...|++.||||.+. +|... .. .++.+++..+++ +.. ++|+||+|+
T Consensus 167 ~~~~~~~~~~a~~~l------~~~g~~~VVITs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~~-~~GtGD~fs 236 (308)
T PLN02978 167 RIVTEEDAREACAIL------HAAGPSKVVITSIDIDGKLLLVGSHRKEKGARPEQFKIVIPKI---PAY-FTGTGDLMA 236 (308)
T ss_pred CCCCHHHHHHHHHHH------HHhCCCEEEEEEecCCCCEEEEEecccccCCCCceEEEEccCC---CCC-CCCchHHHH
Confidence 433333456777777 55688899998754 34332 21 134556665544 444 589999999
Q ss_pred HHHHHHHhcC-CCHHHHHHHHHHHHhhhhhh
Q 019402 300 GGFLSQLVQE-KPVEDCVRTGCYAANVVIQR 329 (341)
Q Consensus 300 a~~~~~l~~g-~~~~~a~~~A~~~aa~~v~~ 329 (341)
|++++.+.+| .++++|++.|...-...++.
T Consensus 237 A~laa~l~~g~~~l~~A~~~A~~~v~~~i~~ 267 (308)
T PLN02978 237 ALLLGWSHKYPDNLDKAAELAVSSLQAVLRR 267 (308)
T ss_pred HHHHHHHhcCCcCHHHHHHHHHHHHHHHHHH
Confidence 9888888888 79999999999888777766
|
|
| >TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.1e-11 Score=109.66 Aligned_cols=161 Identities=16% Similarity=0.101 Sum_probs=112.2
Q ss_pred hhhhcceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCC
Q 019402 153 SIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGW 232 (341)
Q Consensus 153 ~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~ 232 (341)
+.+..+|++++++... +.+.+..+++.+++.+.++++|+.+...... ........++++||..|++.|++....
T Consensus 88 ~~~~~~davvig~Gl~--~~~~~~~l~~~~~~~~~pvVlDa~g~~l~~~----~~~~~~~~~vItPN~~El~~L~g~~~~ 161 (272)
T TIGR00196 88 ELLERYDVVVIGPGLG--QDPSFKKAVEEVLELDKPVVLDADALNLLTY----DKPKREGEVILTPHPGEFKRLLGLVNE 161 (272)
T ss_pred hhhccCCEEEEcCCCC--CCHHHHHHHHHHHhcCCCEEEEhHHHHHHhh----cccccCCCEEECCCHHHHHHHhCCchh
Confidence 4457889999976321 2234788888899899999999875542111 100134689999999999999985433
Q ss_pred CCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCH
Q 019402 233 ETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPV 312 (341)
Q Consensus 233 ~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~ 312 (341)
+.++..++++++. +. ...+|++.|..+.++..++..+..+ .+. ...+++|+||+++|.+.+.+++|.++
T Consensus 162 ~~~~~~~aa~~l~------~~-~~~vVv~kG~~~~i~~~~~~~~~~~-~~~---~~~~~~GaGD~lag~iaa~la~g~~~ 230 (272)
T TIGR00196 162 IQGDRLEAAQDIA------QK-LQAVVVLKGAADVIAAPDGDLWINK-TGN---AALAKGGTGDVLAGLIGGLLAQNLDP 230 (272)
T ss_pred hhhhHHHHHHHHH------HH-hCCEEEEcCCCCEEEcCCCeEEEEC-CCC---CccCCCCchHHHHHHHHHHHhCCCCH
Confidence 4456667777773 22 3458888899998776555555543 223 66789999999666666666799999
Q ss_pred HHHHHHH---HHHHhhhhhhc
Q 019402 313 EDCVRTG---CYAANVVIQRS 330 (341)
Q Consensus 313 ~~a~~~A---~~~aa~~v~~~ 330 (341)
.+|+..| +..|+..+.+.
T Consensus 231 ~~A~~~a~~~~~~a~~~~~~~ 251 (272)
T TIGR00196 231 FDAACNAAFAHGLAGDLALKN 251 (272)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 9999777 77777665443
|
The present model may hit hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis. |
| >COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=99.27 E-value=7e-11 Score=101.62 Aligned_cols=164 Identities=16% Similarity=0.184 Sum_probs=118.7
Q ss_pred hhhcceEEEEeccc-cccCHHHHHHHHHHHHhcCCe--EEEeCC-----cHHHHhhhhHHH-HhhCCCCcEEEcCHHHHH
Q 019402 154 IVEKAKYYYIAGFF-LTVSPESIQMVAEHAAAKNKV--FMMNLS-----APFICEFFREPQ-EKALPYMDYVFGNETEAR 224 (341)
Q Consensus 154 ~~~~~~~v~i~~~~-~~~~~~~~~~~~~~~~~~~~~--v~~d~~-----~~~~~~~~~~~~-~~~l~~~dil~~n~~E~~ 224 (341)
.+.++|.++. |+. .......+..+++..|+.+.. +.+||- .-+......+.. .++++.+|++.||.-|++
T Consensus 70 ~~~~~davlt-GYlgs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD~gglYV~~~~~~~~~~~lip~AdiiTPN~fELe 148 (281)
T COG2240 70 KLGECDAVLT-GYLGSAEQVRAIAGIVKAVKEANPNALYLCDPVMGDPGGLYVAPEVAEAYRDELLPLADIITPNIFELE 148 (281)
T ss_pred cccccCEEEE-ccCCCHHHHHHHHHHHHHHhccCCCeEEEeCCcccCCCceeeccchHHHHHHhhcchhhEeCCCHHHHH
Confidence 5677888875 443 233346778888888887544 677772 111112223333 379999999999999999
Q ss_pred HHHhhcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCC-----CEEEEeCC---eEEEEecccCCCCcccCCCCcch
Q 019402 225 TFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGAD-----PVVVAEDG---KVKLFPVILLPKEKLVDTNGAGD 296 (341)
Q Consensus 225 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~-----G~~~~~~~---~~~~v~~~~~~~~~vvdttGAGD 296 (341)
.|++....+.++..++++.| .+.|+++|+||.-.. |.+++... ..+|+. +.++ .+.+|.||
T Consensus 149 ~Ltg~~~~~~~da~~aa~~L------~~~gp~~vlVTS~~~~~~~~~~~~~~~~~~~~~~h~~-~~v~----~~~~GtGD 217 (281)
T COG2240 149 ILTGKPLNTLDDAVKAARKL------GADGPKIVLVTSLSRAGMSTGNFEMLGKSAELAWHIS-PLVP----FIPNGTGD 217 (281)
T ss_pred HHhCCCCCCHHHHHHHHHHH------hhcCCCEEEEecccccCCCCceEEEeccchhhhhhhh-hcCC----CCCCCchH
Confidence 99998877778888899988 667899999996443 45555433 234443 3332 44999999
Q ss_pred hhHHHHHHHHhcCCCHHHHHHHHHHHHhhhhhh
Q 019402 297 AFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQR 329 (341)
Q Consensus 297 af~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~ 329 (341)
.|+|.|++++++|.++++|+..+..+-...++.
T Consensus 218 L~sallla~lL~g~~~~~al~~~~~~V~evl~~ 250 (281)
T COG2240 218 LFSALLLARLLEGLSLTQALERATAAVYEVLQE 250 (281)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999887777663
|
|
| >PTZ00493 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.3e-09 Score=97.12 Aligned_cols=160 Identities=11% Similarity=0.051 Sum_probs=105.7
Q ss_pred ceEEEEeccccccCHHHHHHHHHHHHhcC------CeEEEeCC-----cHHHHh--hh-hHHHHhhCCCCcEEEcCHHHH
Q 019402 158 AKYYYIAGFFLTVSPESIQMVAEHAAAKN------KVFMMNLS-----APFICE--FF-REPQEKALPYMDYVFGNETEA 223 (341)
Q Consensus 158 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~------~~v~~d~~-----~~~~~~--~~-~~~~~~~l~~~dil~~n~~E~ 223 (341)
.+++=++- -.+.+.+..+.+.+++.+ .++++||- +....+ .. ....+.++++++++.||..|+
T Consensus 74 i~aIKiGm---L~s~e~i~~v~~~l~~~~~~~~~~~~vVlDPVl~sssG~~L~~~~~~~~~~~~~Llp~a~viTPN~~Ea 150 (321)
T PTZ00493 74 IDVVKLGV---LYSKKIISLVHNYITNMNKKRGKKLLVVFDPVFVSSSGCLLVENLEYIKFALDLICPISCIITPNFYEC 150 (321)
T ss_pred CCEEEECC---cCCHHHHHHHHHHHHHhcccccCCCeEEECCceEECCCCccCCcHHHHHHHHHHhhccCEEECCCHHHH
Confidence 45666641 225566666666665542 24888983 111111 11 222356999999999999999
Q ss_pred HHHHhh----cCCCCCCHHHHHHHHhcCCCCCC-CCccEEEEeeCCCC------E------EEEeC--------------
Q 019402 224 RTFAKV----HGWETDNVEEIALKISQWPKASG-THKRITVITQGADP------V------VVAED-------------- 272 (341)
Q Consensus 224 ~~l~~~----~~~~~~~~~~~~~~l~~~~~~~~-~~~~~vvvt~G~~G------~------~~~~~-------------- 272 (341)
+.|++. ...+.++++++++++ .. .|++.|+||-|... . +++..
T Consensus 151 ~~L~g~~~~~~~~~~~~~~~aA~~l------~~~~G~~~VliKGGh~~~~~~~~~~~~~~D~l~~~~~~~~~~~~~~~~~ 224 (321)
T PTZ00493 151 KVILEALDCQMDLSKANMTELCKLV------TEKLNINACLFKSCNVGENSAEENEVYAVDHLCIRNVGSYPTGEKQQID 224 (321)
T ss_pred HHHhCCCcccCCCCHHHHHHHHHHH------HHhcCCCEEEECcCCCcccccccccccceeEEecCCccccccccccccc
Confidence 999871 112344567788888 43 58999999977631 1 23321
Q ss_pred -C------eEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHHHHhhhhhh
Q 019402 273 -G------KVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQR 329 (341)
Q Consensus 273 -~------~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~ 329 (341)
+ +.+.+.... +...++.|.||+|++++++.|++|+++++|++.|...-..++..
T Consensus 225 ~~~~~~~~~~~~~~~~r---i~~~~~hGTGc~fASAIAa~LA~G~~l~~Av~~A~~fv~~aI~~ 285 (321)
T PTZ00493 225 AGGVTYLYDVYKLRSKR---KPGKDIHGTGCTLSTAIACYLAKKHNILQSCIESKKYIYNCIRY 285 (321)
T ss_pred cccccccceEEEEEecc---cCCCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 1 123333332 24467899999999999999999999999999998888777765
|
|
| >PRK09355 hydroxyethylthiazole kinase; Validated | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.4e-09 Score=92.44 Aligned_cols=164 Identities=15% Similarity=0.095 Sum_probs=106.3
Q ss_pred hHhhhhcceEEEEeccccccCHH---HHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCC--CCcEEEcCHHHHHH
Q 019402 151 IWSIVEKAKYYYIAGFFLTVSPE---SIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP--YMDYVFGNETEART 225 (341)
Q Consensus 151 ~~~~~~~~~~v~i~~~~~~~~~~---~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~--~~dil~~n~~E~~~ 225 (341)
..+....+|.+++..-.+ ..+ .+..+++.+++.++++++||..........+...++++ +.+++++|..|+..
T Consensus 48 ~~~~~~~~~alvi~~G~l--~~~~~~~i~~~~~~a~~~~~pvVlDpv~~~~~~~~~~~~~~ll~~~~~~vItPN~~E~~~ 125 (263)
T PRK09355 48 AEEMAKIAGALVINIGTL--TEERIEAMLAAGKIANEAGKPVVLDPVGVGATSYRTEFALELLAEVKPAVIRGNASEIAA 125 (263)
T ss_pred HHHHHHhcCceEEeCCCC--CHHHHHHHHHHHHHHHhcCCCEEECCcccCcchhhHHHHHHHHHhcCCcEecCCHHHHHH
Confidence 445677889999854222 332 35555666788899999999653211111222333333 68999999999999
Q ss_pred HHhhcCC----C----CCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchh
Q 019402 226 FAKVHGW----E----TDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDA 297 (341)
Q Consensus 226 l~~~~~~----~----~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDa 297 (341)
|++.... + .++..+.++.+. .++...|++| |.. -+++.++..+.++... + ...+.+|+||+
T Consensus 126 L~g~~~~~~~vd~~~~~~~~~~~a~~la------~~~~~~Vvvk-G~~-d~I~~~~~~~~~~~g~-~--~~~~v~GtGc~ 194 (263)
T PRK09355 126 LAGEAAETKGVDSTDGSADAVEIAKAAA------KKYGTVVVVT-GEV-DYITDGERVVSVHNGH-P--LMTKVTGTGCL 194 (263)
T ss_pred HhCCCcccCCcCCCCCHHHHHHHHHHHH------HHhCCEEEEE-CCC-cEEEeCCEEEEEeCCC-c--ccCCcccccHH
Confidence 9875321 1 124556677773 3334567787 443 3555566666665221 1 34556999999
Q ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHhhhh
Q 019402 298 FVGGFLSQLVQEKPVEDCVRTGCYAANVVI 327 (341)
Q Consensus 298 f~a~~~~~l~~g~~~~~a~~~A~~~aa~~v 327 (341)
+.|.+.+.+.+|.++.+|+..|...-+.+-
T Consensus 195 L~~~iaa~lA~g~~~~~A~~~A~~~~~~a~ 224 (263)
T PRK09355 195 LSAVVAAFAAVEKDYLEAAAAACAVYGIAG 224 (263)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999888876655543
|
|
| >TIGR00694 thiM hydroxyethylthiazole kinase | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.7e-08 Score=87.94 Aligned_cols=165 Identities=16% Similarity=0.075 Sum_probs=105.0
Q ss_pred hHhhhhcceEEEEeccccccC--HHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCC--CCcEEEcCHHHHHHH
Q 019402 151 IWSIVEKAKYYYIAGFFLTVS--PESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP--YMDYVFGNETEARTF 226 (341)
Q Consensus 151 ~~~~~~~~~~v~i~~~~~~~~--~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~--~~dil~~n~~E~~~l 226 (341)
..+..+.++.+++..-.+ .+ .+.+..+++.+++.++++++||-.........+...++++ +.+++.+|..|+..|
T Consensus 43 ~~~~~~~~~al~ik~G~l-~~~~~~~i~~~~~~~~~~~~pvVlDPV~~~~s~~r~~~~~~Ll~~~~~~vITpN~~E~~~L 121 (249)
T TIGR00694 43 VAELAKIAGALVINIGTL-DKESIEAMIAAGKSANELGVPVVLDPVGVGATKFRTETALELLSEGRFAAIRGNAGEIASL 121 (249)
T ss_pred HHHHHHHcCceEEeCCCC-CHHHHHHHHHHHHHHHhcCCCEEEcccccccchhHHHHHHHHHhhcCCceeCCCHHHHHHH
Confidence 445677888888875322 12 2455666777778889999999643221111222345565 479999999999999
Q ss_pred Hhhc----CCC----CCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhh
Q 019402 227 AKVH----GWE----TDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAF 298 (341)
Q Consensus 227 ~~~~----~~~----~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf 298 (341)
++.. +.+ .++..++++.+. .++...|++| |..- +++++++.+.+...+. ..-..+|.||++
T Consensus 122 ~g~~~~~~gvd~~~~~~d~~~~a~~la------~~~~~~Vllk-G~~D-~i~~~~~~~~~~~g~~---~~~~~~GtGc~L 190 (249)
T TIGR00694 122 AGETGLMKGVDSGEGAADAIRAAQQAA------QKYGTVVVIT-GEVD-YVSDGTSVYTIHNGTE---LLGKITGSGCLL 190 (249)
T ss_pred hCCCCCCCCcCCccchHHHHHHHHHHH------HHhCCEEEEE-CCCc-EEEeCCEEEEECCCCh---HHhCCccchHHH
Confidence 8743 111 234556677763 2223367776 5543 4556666655432111 112247999999
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHhhhh
Q 019402 299 VGGFLSQLVQEKPVEDCVRTGCYAANVVI 327 (341)
Q Consensus 299 ~a~~~~~l~~g~~~~~a~~~A~~~aa~~v 327 (341)
.+++.+.+++|.++.+|+..|...-..+.
T Consensus 191 ssaIaa~LA~g~~~~~A~~~A~~~~~~a~ 219 (249)
T TIGR00694 191 GSVVAAFCAVEEDPLDAAISACLLYKIAG 219 (249)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999998875444443
|
This model represents the hydoxyethylthiazole kinase, ThiM, of a number of bacteria, and C-terminal domains of bifunctional thiamine biosynthesis proteins of Saccharomyces cerevisiae and Schizosaccharomyces pombe, in which the N-terminal domain corresponds to the bacterial thiamine-phosphate pyrophosphorylase (EC 2.5.1.3), ThiE. |
| >KOG2599 consensus Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.55 E-value=7.4e-07 Score=75.47 Aligned_cols=163 Identities=17% Similarity=0.167 Sum_probs=102.4
Q ss_pred hhcceEEEEeccccccC-HHHHHHHHHHHHhcCCe--EEEeCCc-----HHHHhhhhHHHHhhC-CCCcEEEcCHHHHHH
Q 019402 155 VEKAKYYYIAGFFLTVS-PESIQMVAEHAAAKNKV--FMMNLSA-----PFICEFFREPQEKAL-PYMDYVFGNETEART 225 (341)
Q Consensus 155 ~~~~~~v~i~~~~~~~~-~~~~~~~~~~~~~~~~~--v~~d~~~-----~~~~~~~~~~~~~~l-~~~dil~~n~~E~~~ 225 (341)
+..+|.+. +|+..+.+ .+.+..+.++.|+.+.. .++||-- .+.+++--..-++.+ +.+|++.||.-|++.
T Consensus 79 ~~~Y~~vL-TGY~~n~~~l~~i~~iv~~lk~~np~~~wv~DPVmGDnG~lYV~eelipvYr~~i~~ladiiTPNqFE~Ei 157 (308)
T KOG2599|consen 79 LNKYDAVL-TGYLPNVSFLQKIADIVKKLKKKNPNLTWVCDPVMGDNGRLYVPEELIPVYRDLIIPLADIITPNQFEAEI 157 (308)
T ss_pred ccccceee-eeccCChhHHHHHHHHHHHHHhcCCCeEEEeCccccCCccEeccHHHHHHHHHhhcchhhhcCCcchhhhh
Confidence 34566554 56654443 36677777777776644 5677721 111222222233444 459999999999999
Q ss_pred HHhhcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCC----CCE-EEE----eCCeEEEEecccCCCCcccCCCCcch
Q 019402 226 FAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGA----DPV-VVA----EDGKVKLFPVILLPKEKLVDTNGAGD 296 (341)
Q Consensus 226 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~----~G~-~~~----~~~~~~~v~~~~~~~~~vvdttGAGD 296 (341)
|++....+.++..++.+.+ +.++++.||||... .|. ++. .+.+.+.+..|.+ .- --||.||
T Consensus 158 Ltg~~I~t~eda~~a~~~l------hq~~v~~vVITS~~~~~~~g~~l~c~gs~~~~~~f~~~ipki---~~-~FtGTGD 227 (308)
T KOG2599|consen 158 LTGMEIRTEEDAKRAVEKL------HQKGVKTVVITSFDLGEFTGETLRCIGSSCGSERFRYLIPKI---DG-VFTGTGD 227 (308)
T ss_pred hcCCeeccHHHHHHHHHHH------HHhCCCEEEEEeeeeCCCCCcEEEEEEeccCCceEEEEeccc---ce-EEecccH
Confidence 9998888888899999999 67789999999654 242 222 1223444443333 21 2489999
Q ss_pred hhHHHHHHHHhcC---CCHHHHHHHHHHHHhhhhh
Q 019402 297 AFVGGFLSQLVQE---KPVEDCVRTGCYAANVVIQ 328 (341)
Q Consensus 297 af~a~~~~~l~~g---~~~~~a~~~A~~~aa~~v~ 328 (341)
.|+|-+++-+..- .++..+++.+...--..++
T Consensus 228 LfsaLLla~~~~~~~~~~l~~a~e~~ls~~~~viq 262 (308)
T KOG2599|consen 228 LFSALLLAWLHESPDNDDLSKAVEQVLSSVQAVIQ 262 (308)
T ss_pred HHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHH
Confidence 9998887766554 4566676666554444443
|
|
| >PRK03979 ADP-specific phosphofructokinase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=2.1e-05 Score=73.23 Aligned_cols=75 Identities=16% Similarity=0.063 Sum_probs=53.7
Q ss_pred cceEEEEeccccccC-----------HHHHHHHHHHHH--hcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHH
Q 019402 157 KAKYYYIAGFFLTVS-----------PESIQMVAEHAA--AKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEA 223 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~-----------~~~~~~~~~~~~--~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~ 223 (341)
..|.++++|+.+.-. .+.+.+.++..+ ..++++.+++.+..........+..+++++|.+-+|++|+
T Consensus 222 ~~D~avlSG~q~i~~~y~dg~~~~~~l~r~~~~i~~L~~~~~~i~iH~E~As~~~~~ir~~i~~~ilp~vDSlGmNE~EL 301 (463)
T PRK03979 222 MVDGAILSGYQGIKEEYSDGKTAEYYLKRAKEDIKLLKKKNKDIKIHVEFASIQNREIRKKIITYILPHVDSVGMDETEI 301 (463)
T ss_pred CCCEEEEechhhhhccccccccHHHHHHHHHHHHHHHhhCCCCceEEEEeccccCHHHHHHHHHhhccccccccCCHHHH
Confidence 499999999984222 122333444443 3467899999876655556677778999999999999999
Q ss_pred HHHHhhcC
Q 019402 224 RTFAKVHG 231 (341)
Q Consensus 224 ~~l~~~~~ 231 (341)
..+....+
T Consensus 302 a~l~~~lg 309 (463)
T PRK03979 302 ANILNVLG 309 (463)
T ss_pred HHHHHHhc
Confidence 98776553
|
|
| >PRK14039 ADP-dependent glucokinase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=5.7e-05 Score=70.21 Aligned_cols=171 Identities=15% Similarity=0.025 Sum_probs=96.3
Q ss_pred CCceeecCchhHHHHHHHHHHhCCCCceEE-EEeecCCchhHHHHHHHHhcCCceeEee-------------cCCCCcce
Q 019402 54 ENVEYIAGGATQNSIKVAQWMLQIPGATSY-IGCIGKDKFGEEMKKNSTAAGVNVKYYE-------------DESAPTGT 119 (341)
Q Consensus 54 ~~~~~~~GG~~~n~a~~l~~l~~lg~~v~l-i~~vG~D~~g~~i~~~l~~~gi~~~~~~-------------~~~~~t~~ 119 (341)
.....+.||.+..+|..++. +|.++++ .++ ..++..++.|...+|-.-... ....+.-.
T Consensus 84 ~~~~~rmGGnAgimAn~la~---lg~~~Vi~~~~----~lsk~q~~lf~~~~i~~p~~~~~~~l~~~~~~~a~~~~~d~I 156 (453)
T PRK14039 84 DNSEIRMGGNAGIMANVLSE---LGASRVVPNVA----VPSKTQLSLFSKKAVYFPGMPLQASETDGEKVGASSSDQEPI 156 (453)
T ss_pred cCceEEeCChHHHHHHHHHh---cCCceEEEcCC----CCCHHHHHhcCCCCEEeccccccccccCccccccccCCCCCc
Confidence 45678999999999988886 4477544 333 223444555533333222110 01112222
Q ss_pred EEEE-EeCCeece-----eecccccccCCcc-----cCCC-chhHhhhh----cceEEEEeccccccC--------HHHH
Q 019402 120 CAVC-VVGGERSL-----VANLSAANCYKSE-----HLKR-PEIWSIVE----KAKYYYIAGFFLTVS--------PESI 175 (341)
Q Consensus 120 ~~~~-~~~g~~~~-----~~~~~~~~~~~~~-----~~~~-~~~~~~~~----~~~~v~i~~~~~~~~--------~~~~ 175 (341)
-+++ +..|.+.. +..+-+|+.+-.. .+.. +++.+.+. ++|.++++|+.+... .+.+
T Consensus 157 H~IfEy~~G~~~~l~~~~~~aPRaNRfI~s~D~~N~~l~i~e~f~~~l~e~~~~~D~avlSG~q~l~d~y~dg~~~~e~l 236 (453)
T PRK14039 157 HFVFDFREGETFSLYGTRIRAPRENRFIATFDHLNFRLFINPAFEQYALEHAGEMDGALISGFHLLLETYPDGSTYREKL 236 (453)
T ss_pred eEEEEeCCCCEEecCCccEecCCCCeEEEecCCCCccceecHHHHHHHHhhccCCCEEEEechhhhhhhcCCcccHHHHH
Confidence 2222 22455441 1222222211111 1111 23334444 789999999985322 2333
Q ss_pred HHHHHHHHh-----cCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcC
Q 019402 176 QMVAEHAAA-----KNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHG 231 (341)
Q Consensus 176 ~~~~~~~~~-----~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~ 231 (341)
.+..+..+. .++++.+++.+....+.....+..+++++|.+-+|++|+..+....+
T Consensus 237 ~~~~~~i~~l~~~~~~i~iH~E~As~~~~~i~~~v~~~Ilp~VDSlGmNEqELa~l~~~~g 297 (453)
T PRK14039 237 EDSLAQLKWWKSKNEKLRIHAELGHFASKEIANSVFLILAGIVDSIGMNEDELAMLANLHG 297 (453)
T ss_pred HHHHHHHHHHHhcCCCceEEEEecCcccHHHHHHHHHHhhcccccccCCHHHHHHHHHHcc
Confidence 343333332 44789999987766666677788899999999999999999987654
|
|
| >KOG2598 consensus Phosphomethylpyrimidine kinase [Coenzyme transport and metabolism; Transcription] | Back alignment and domain information |
|---|
Probab=98.39 E-value=4.3e-06 Score=75.41 Aligned_cols=149 Identities=18% Similarity=0.203 Sum_probs=103.0
Q ss_pred CHHHHHHHHHHHHhcCC-eEEEeCC-----cHHH--HhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcC------CCCCC
Q 019402 171 SPESIQMVAEHAAAKNK-VFMMNLS-----APFI--CEFFREPQEKALPYMDYVFGNETEARTFAKVHG------WETDN 236 (341)
Q Consensus 171 ~~~~~~~~~~~~~~~~~-~v~~d~~-----~~~~--~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~------~~~~~ 236 (341)
+++.+.-+.+.+...++ ++++||- +... .+.-.-..+++++.+|++.+|..|+-.|.+... .+..+
T Consensus 103 ~~~I~~vi~q~l~~~~~~klVvDPVivatsG~~l~~~divsl~~e~l~P~adiltPNI~Ea~~Ll~~~~~~~~~i~~v~d 182 (523)
T KOG2598|consen 103 SPEIVKVIEQSLQKFNIPKLVVDPVIVATSGSSLAGKDIVSLFIEELLPFADILTPNIPEAFILLKKEKREISKIQSVFD 182 (523)
T ss_pred chHHHHHHHHHHHhhcCcceeecceEEeccCCcccCCccHHHHHHHhhhhHHHhCCChHHHHHHHhhcccCCcccccHHH
Confidence 34444444444444454 4778872 1111 111223467899999999999999999987422 23455
Q ss_pred HHHHHHHHhcCCCCCCCCccEEEEeeCCCCE-----------------EEEeCCeEEEEecccCCCCcccCCCCcchhhH
Q 019402 237 VEEIALKISQWPKASGTHKRITVITQGADPV-----------------VVAEDGKVKLFPVILLPKEKLVDTNGAGDAFV 299 (341)
Q Consensus 237 ~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~-----------------~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~ 299 (341)
+++.++.+ .+.|++.|+++.|.-.. ++|.+.+++..+.+.+ ....+-|.|-+.+
T Consensus 183 i~~~~~~i------hk~gpk~VlvkGghiP~~~~~~~s~d~~~~~~~DvlydG~~F~~f~~~~~---~t~~tHGtgCtLa 253 (523)
T KOG2598|consen 183 IAKDAAKI------HKLGPKNVLVKGGHIPFNKNMMTSKDDSDKYTVDVLYDGKEFYIFKSPYL---ATKHTHGTGCTLA 253 (523)
T ss_pred HHHHHHHH------HhcCcceEEEeCCCcCccccccccCcccCCceEEEEEecceEEEeccccc---ccccccCccchHH
Confidence 66777777 67889999999775221 3445666777776555 6678999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHhhhhh
Q 019402 300 GGFLSQLVQEKPVEDCVRTGCYAANVVIQ 328 (341)
Q Consensus 300 a~~~~~l~~g~~~~~a~~~A~~~aa~~v~ 328 (341)
+++...|++|.++.+|+..|...---+++
T Consensus 254 SAIASnLA~g~sl~qAv~~ai~yvq~Ai~ 282 (523)
T KOG2598|consen 254 SAIASNLARGYSLLQAVQGAIEYVQNAIA 282 (523)
T ss_pred HHHHHHHhhcCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988765444443
|
|
| >TIGR02045 P_fruct_ADP ADP-specific phosphofructokinase | Back alignment and domain information |
|---|
Probab=98.32 E-value=9.9e-05 Score=68.49 Aligned_cols=77 Identities=17% Similarity=0.081 Sum_probs=56.2
Q ss_pred hhcceEEEEeccccccC-----------HHHHHHHHHHHHh-cCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHH
Q 019402 155 VEKAKYYYIAGFFLTVS-----------PESIQMVAEHAAA-KNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETE 222 (341)
Q Consensus 155 ~~~~~~v~i~~~~~~~~-----------~~~~~~~~~~~~~-~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E 222 (341)
-..+|.++++|+.+... .+...+.++..+. .++++.+++.+....+.....+..+++++|.+-+|++|
T Consensus 207 ~~~~d~~vlSG~q~m~~~y~dg~~~~~~~er~~~~i~~L~~~~~i~iH~E~As~~~~~l~~~i~~~ilp~vDSlGMNE~E 286 (446)
T TIGR02045 207 GEPVDGAILSGYQGIKEEYSDGKTAKYYLERAKEDIELLKKNKDLKIHVEFASIQNREIRKKVVTNIFPHVDSVGMDEAE 286 (446)
T ss_pred hhcccEEEEEchhhhhhhccCCccHhHHHHHHHHHHHHHhhCCCCeEEEEecccccHHHHHHHHHhhccccccccCCHHH
Confidence 35689999999984221 1234444455433 66889999987765555667777899999999999999
Q ss_pred HHHHHhhcC
Q 019402 223 ARTFAKVHG 231 (341)
Q Consensus 223 ~~~l~~~~~ 231 (341)
+..+....+
T Consensus 287 La~ll~~lg 295 (446)
T TIGR02045 287 IANVLSVLG 295 (446)
T ss_pred HHHHHHHhc
Confidence 999886543
|
Phosphofructokinase is a key enzyme of glycolysis. The phosphate group donor for different subtypes of phosphofructokinase can be ATP, ADP, or pyrophosphate. This family consists of ADP-dependent phosphofructokinases. Members are more similar to ADP-dependent glucokinases (excluded from this family) than to other phosphofructokinases. |
| >PF04587 ADP_PFK_GK: ADP-specific Phosphofructokinase/Glucokinase conserved region; InterPro: IPR007666 Although ATP is the most common phosphoryl group donor for kinases, certain hyperthermophilic archaea, such as Thermococcus litoralis and Pyrococcus furiosus, utilise unusual ADP-dependent glucokinases (ADPGKs) and phosphofructokinases (ADPPKKs) in their glycolytic pathways [, , ] | Back alignment and domain information |
|---|
Probab=98.06 E-value=5.2e-05 Score=71.42 Aligned_cols=76 Identities=20% Similarity=0.146 Sum_probs=49.5
Q ss_pred hcceEEEEeccccccC----H-------HHHHHHHHHHH-hcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHH
Q 019402 156 EKAKYYYIAGFFLTVS----P-------ESIQMVAEHAA-AKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEA 223 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~----~-------~~~~~~~~~~~-~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~ 223 (341)
.++|.++++|+.+.-. . +.+.+.++..+ ..+.++.+++.+....+..+..+..+++++|.+-+|++|+
T Consensus 208 ~~~d~~vlSGlq~l~~~~~d~~~~~~~l~~~~~~i~~l~~~~~~~iH~E~As~~d~~l~~~i~~~ilp~vDSlGmNEqEL 287 (444)
T PF04587_consen 208 FKPDLAVLSGLQMLDEFYFDGETYEERLKRLKEQIKLLKSNPDIPIHLELASFADEELRKEILEKILPHVDSLGMNEQEL 287 (444)
T ss_dssp TT-SEEEEE-GGG--TB-TTSTCHHHHHHHHHHHHHHHH-HTT-EEEEE----SSHHHHHHHHHHHGGGSSEEEEEHHHH
T ss_pred cCCCEEEEeccccchhhccchhHHHHHHHHHHHHHHhccCCCCCceEEEeccccCHHHHHHHHHHhhccccccccCHHHH
Confidence 4499999999985321 1 23344444555 5788999999876655556677778999999999999999
Q ss_pred HHHHhhcC
Q 019402 224 RTFAKVHG 231 (341)
Q Consensus 224 ~~l~~~~~ 231 (341)
..++...+
T Consensus 288 ~~l~~~lg 295 (444)
T PF04587_consen 288 ANLLSVLG 295 (444)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhC
Confidence 98876544
|
ADPGKs and ADPPFKs exhibit significant similarity, and form an ADP-dependent kinase (ADPK) family, which was tentatively named the PFKC family []. A ~460-residue ADPK domain is also found in a bifunctional ADP-dependent gluco/phosphofructo- kinase (ADP-GK/PFK) from Methanocaldococcus jannaschii (Methanococcus jannaschii) as well as in homologous hypothetical proteins present in several eukaryotes []. The whole structure of the ADPK domain can be divided into large and small alpha/beta subdomains. The larger subdomain, which carries the ADP binding site, consists of a twisted 12-stranded beta sheet flanked on both faces by 13 alpha helices and three 3(10) helices, forming an alpha/beta 3-layer sandwich. The smaller subdomain, which covers the active site, forms an alpha/beta two-layer structure containing 5 beta strands and four alpha helices. The ADP molecule is buried in a shallow pocket in the large subdomain. The binding of substrate sugar induces a structural change, the small domain closing to form a complete substrate sugar binding site [, , ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 1GC5_A 1L2L_A 3DRW_B 1U2X_A 1UA4_A. |
| >PRK14038 ADP-dependent glucokinase; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.00032 Score=65.25 Aligned_cols=78 Identities=18% Similarity=0.061 Sum_probs=52.4
Q ss_pred hhhhcceEEEEeccccccC---HHH---HHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHH
Q 019402 153 SIVEKAKYYYIAGFFLTVS---PES---IQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTF 226 (341)
Q Consensus 153 ~~~~~~~~v~i~~~~~~~~---~~~---~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l 226 (341)
+...+.|+++++|+.+... .+. +.+.++..++.++++.+++........... +.++++++|-+-+|++|+..+
T Consensus 220 ei~~~~Dl~vlSG~q~l~~~~~~~~l~~~~~~l~~l~~~~i~iH~EfAs~~d~~~r~~-i~~ilp~vDSlGmNE~ELa~l 298 (453)
T PRK14038 220 EIAKKAELAIISGLQALTEENYREPFETVREHLKVLNERGIPAHLEFAFTPDETVREE-ILGLLGKFYSVGLNEVELASI 298 (453)
T ss_pred hhccCCCEEEEEchhhhccccHHHHHHHHHHHHHhcCcCCceEEEEeeccchHHHHHH-HHhhCccccccccCHHHHHHH
Confidence 3446799999999984221 123 333333434467889999975543333334 446999999999999999988
Q ss_pred HhhcC
Q 019402 227 AKVHG 231 (341)
Q Consensus 227 ~~~~~ 231 (341)
....+
T Consensus 299 l~~lg 303 (453)
T PRK14038 299 MEVMG 303 (453)
T ss_pred HHHhc
Confidence 87544
|
|
| >PF01256 Carb_kinase: Carbohydrate kinase; InterPro: IPR000631 This family is related to Hydroxyethylthiazole kinase IPR000417 from INTERPRO and PfkB carbohydrate kinase IPR011611 from INTERPRO implying that it also a carbohydrate kinase | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00018 Score=62.32 Aligned_cols=157 Identities=17% Similarity=0.091 Sum_probs=101.2
Q ss_pred hhhhcceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCC
Q 019402 153 SIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGW 232 (341)
Q Consensus 153 ~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~ 232 (341)
+.++++|.+.+.+ .+.... ....+++...+...++++|-.....-.... ...+.--|+.|+.-|+.+|++....
T Consensus 63 ~~~~~~~av~iGP-Glg~~~-~~~~~~~~~~~~~~p~VlDADaL~~l~~~~----~~~~~~~IlTPH~gE~~rL~~~~~~ 136 (242)
T PF01256_consen 63 ELLEKADAVVIGP-GLGRDE-ETEELLEELLESDKPLVLDADALNLLAENP----KKRNAPVILTPHPGEFARLLGKSVE 136 (242)
T ss_dssp HHHCH-SEEEE-T-T-SSSH-HHHHHHHHHHHHCSTEEEECHHHHCHHHCC----CCSSSCEEEE-BHHHHHHHHTTTCH
T ss_pred hhhccCCEEEeec-CCCCch-hhHHHHHHHHhhcceEEEehHHHHHHHhcc----ccCCCCEEECCCHHHHHHHhCCccc
Confidence 5678899999976 223333 334466666667778999986543211100 2344566777999999999986542
Q ss_pred CCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCH
Q 019402 233 ETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPV 312 (341)
Q Consensus 233 ~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~ 312 (341)
..++..++++++.+. .+.+|+=.|..-.....+++.+..+.-. .-.-+-|.||.+++-+..-+.++.++
T Consensus 137 ~~~~~~~~a~~~a~~-------~~~~vvLKG~~t~I~~p~~~~~~n~~gn----~~la~gGsGDvLaGii~~llaq~~~~ 205 (242)
T PF01256_consen 137 IQEDRIEAAREFAKE-------YGAVVVLKGAVTIIASPGGRVYVNPTGN----PGLATGGSGDVLAGIIAGLLAQGYDP 205 (242)
T ss_dssp HCCSHHHHHHHHHHH-------HTSEEEEESTSSEEEEETSEEEEE--------GGGSSTTHHHHHHHHHHHHHHHTSSH
T ss_pred chhhHHHHHHHHHhh-------cCcEEEEeCCCcEEEecCcceeEeCCCC----CCCCCCCcccHHHHHHHHHHHccCCH
Confidence 345667777776431 2335666688666666688777766432 45678999999998888888999999
Q ss_pred HHHHHHHHHHHhhh
Q 019402 313 EDCVRTGCYAANVV 326 (341)
Q Consensus 313 ~~a~~~A~~~aa~~ 326 (341)
.+|...|+..=+.+
T Consensus 206 ~~Aa~~av~lHg~A 219 (242)
T PF01256_consen 206 FEAACLAVYLHGRA 219 (242)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99988887654433
|
Several uncharacterised proteins have been shown to share regions of similarities, including yeast chromosome XI hypothetical protein YKL151c; Caenorhabditis elegans hypothetical protein R107.2; Escherichia coli hypothetical protein yjeF; Bacillus subtilis hypothetical protein yxkO; Helicobacter pylori hypothetical protein HP1363; Mycobacterium tuberculosis hypothetical protein MtCY77.05c; Mycobacterium leprae hypothetical protein B229_C2_201; Synechocystis sp. (strain PCC 6803) hypothetical protein sll1433; and Methanocaldococcus jannaschii (Methanococcus jannaschii) hypothetical protein MJ1586. These are proteins of about 30 to 40 kDa whose central region is well conserved.; PDB: 3RSG_A 3RT9_A 3RRF_A 3RTB_A 3RRE_A 3RS9_A 3RSS_A 3RRB_A 3RTA_A 3RTD_A .... |
| >PF02110 HK: Hydroxyethylthiazole kinase family; InterPro: IPR000417 Thiamine pyrophosphate (TPP), a required cofactor for many enzymes in the cell, is synthesised de novo in Salmonella typhimurium [] | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00029 Score=60.57 Aligned_cols=161 Identities=17% Similarity=0.093 Sum_probs=98.5
Q ss_pred hhHhhhhcceEEEEecccccc-CHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCC--CCcEEEcCHHHHHHH
Q 019402 150 EIWSIVEKAKYYYIAGFFLTV-SPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP--YMDYVFGNETEARTF 226 (341)
Q Consensus 150 ~~~~~~~~~~~v~i~~~~~~~-~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~--~~dil~~n~~E~~~l 226 (341)
|..+..+.++.+++.--++.- ..+.+...++.+.+.++|+++||-+-.......+...++++ +.++|+.|..|...|
T Consensus 42 E~~e~~~~a~al~iNiGTl~~~~~~~m~~A~~~A~~~~~PvVLDPVgvGas~~R~~~~~~LL~~~~~~vIrGN~sEI~aL 121 (246)
T PF02110_consen 42 EVEEFASIADALVINIGTLTDERIEAMKKAAKAANELGIPVVLDPVGVGASKFRTEFALELLNNYKPTVIRGNASEIAAL 121 (246)
T ss_dssp THHHHHHCTSEEEEESTTSSHHHHHHHHHHHHHHHHTT--EEEE-TTBTTBHHHHHHHHHHHCHS--SEEEEEHHHHHHH
T ss_pred HHHHHHHHcCEEEEECCCCCHhHHHHHHHHHHHHHHcCCCEEEeCcccCCcHHHHHHHHHHHHhCCCcEEEeCHHHHHHH
Confidence 344667788888886433211 12678888899999999999999654433334556777884 689999999999999
Q ss_pred HhhcCC----CC----CCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhh
Q 019402 227 AKVHGW----ET----DNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAF 298 (341)
Q Consensus 227 ~~~~~~----~~----~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf 298 (341)
.+.... |. .+..+.++.+.+. . -..|++| |+.... .++.+.+.++--.. -.-.-||.|+..
T Consensus 122 ag~~~~~kGVDs~~~~~~~~~~a~~lA~k-----~-~~vVvvT-G~~D~I-sdg~~~~~i~nG~~---~l~~itGtGC~l 190 (246)
T PF02110_consen 122 AGEDSKAKGVDSGDSDEDAIEAAKQLAQK-----Y-NCVVVVT-GEVDYI-SDGNRVYRIPNGSP---LLSKITGTGCML 190 (246)
T ss_dssp HTCCCCSCSSSSSCGSHHHHHHHHHHHHH-----T-TSEEEEE-SSSEEE-EESSCEEEECSSSG---GGGGSTTHHHHH
T ss_pred hCcCCCCCCcCcCCcchHHHHHHHHHHHh-----c-CCEEEEe-cCCcEE-ECCCeEEEeCCCCh---HhcceeccchHH
Confidence 985422 21 1134566666431 1 2344444 775554 45666666653211 344569999998
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHH
Q 019402 299 VGGFLSQLVQEKPVEDCVRTGCY 321 (341)
Q Consensus 299 ~a~~~~~l~~g~~~~~a~~~A~~ 321 (341)
.+-+.+.+....+.-++...|..
T Consensus 191 galiaaf~av~~d~~~aa~~a~~ 213 (246)
T PF02110_consen 191 GALIAAFLAVAEDPLEAAVAAVA 213 (246)
T ss_dssp HHHHHHHHCCCSSHHHHHHHHHH
T ss_pred HHHHHHHHhccccchHHHHHHHH
Confidence 87777777665666665544443
|
Five kinase activities have been implicated in TPP synthesis, which involves joining a 4-methyl-5-(beta-hydroxyethyl)thiazole (THZ) moiety and a 4-amino-5- hydroxymethyl-2-methylpyrimidine (HMP) moiety [, ]. THZ kinase (2.7.1.50 from EC) activity is involved in the salvage synthesis of TH-P from the thiazole: |
| >PRK10565 putative carbohydrate kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00033 Score=67.34 Aligned_cols=151 Identities=17% Similarity=0.111 Sum_probs=92.5
Q ss_pred hhhhcceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCC
Q 019402 153 SIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGW 232 (341)
Q Consensus 153 ~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~ 232 (341)
+.++.+|.+++..-. ..+ +....+++.+++.+.++++|.....+-..... .....+|.||..|+..|++....
T Consensus 316 ~~~~~~~a~viGpGl-g~~-~~~~~~~~~~~~~~~P~VLDAdaL~ll~~~~~-----~~~~~VLTPh~gE~~rL~~~~~~ 388 (508)
T PRK10565 316 ESLEWADVVVIGPGL-GQQ-EWGKKALQKVENFRKPMLWDADALNLLAINPD-----KRHNRVITPHPGEAARLLGCSVA 388 (508)
T ss_pred HHhhcCCEEEEeCCC-CCC-HHHHHHHHHHHhcCCCEEEEchHHHHHhhCcc-----ccCCeEECCCHHHHHHHhCCChh
Confidence 345678888887522 222 33355557777778899999976442111100 11246899999999999873221
Q ss_pred CC-CCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeC-CeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCC
Q 019402 233 ET-DNVEEIALKISQWPKASGTHKRITVITQGADPVVVAED-GKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEK 310 (341)
Q Consensus 233 ~~-~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~-~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~ 310 (341)
.. .+..+.++.+.+ ....+||+ .|.. .+++.. +..+..+.- . ...-++|.||.++|.+.+-++++.
T Consensus 389 ~v~~~~~~~a~~~a~------~~~~~vvl-KG~~-~iI~~~~~~~~~~~~G-~---~~ma~~GsGDvLaGiIaalla~g~ 456 (508)
T PRK10565 389 EIESDRLLSARRLVK------RYGGVVVL-KGAG-TVIAAEPDALAIIDVG-N---AGMASGGMGDVLSGIIGALLGQKL 456 (508)
T ss_pred hhhhhHHHHHHHHHH------HhCCEEEE-eCCC-cEEEcCCceEEEECCC-C---CCCCCCChHHHHHHHHHHHHHcCC
Confidence 11 133445555532 22234554 4663 455543 444444322 1 445679999999998888889999
Q ss_pred CHHHHHHHHHHH
Q 019402 311 PVEDCVRTGCYA 322 (341)
Q Consensus 311 ~~~~a~~~A~~~ 322 (341)
++.+|+..|+..
T Consensus 457 ~~~~Aa~~a~~l 468 (508)
T PRK10565 457 SPYDAACAGCVA 468 (508)
T ss_pred CHHHHHHHHHHH
Confidence 998888887743
|
|
| >COG2145 ThiM Hydroxyethylthiazole kinase, sugar kinase family [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.0014 Score=56.01 Aligned_cols=158 Identities=17% Similarity=0.120 Sum_probs=97.9
Q ss_pred hHhhhhcceEEEEecccccc-CHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCC--CcEEEcCHHHHHHHH
Q 019402 151 IWSIVEKAKYYYIAGFFLTV-SPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPY--MDYVFGNETEARTFA 227 (341)
Q Consensus 151 ~~~~~~~~~~v~i~~~~~~~-~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~--~dil~~n~~E~~~l~ 227 (341)
..+..+-++.+.|.--++.- ..+.+...++.+.+.+.|+++||-+-.-.+..++...++|++ .++|..|.-|...|.
T Consensus 49 ~~e~~kia~AL~INIGTL~~~~~~~m~~A~~~An~~~~PvvLDPVgvgAt~~R~~~~~~LL~~~~~~~IrGN~sEI~~La 128 (265)
T COG2145 49 VEEFAKIADALLINIGTLSAERIQAMRAAIKAANESGKPVVLDPVGVGATKFRTKFALELLAEVKPAAIRGNASEIAALA 128 (265)
T ss_pred HHHHHHhccceEEeeccCChHHHHHHHHHHHHHHhcCCCEEecCccCCchHHHHHHHHHHHHhcCCcEEeccHHHHHHHh
Confidence 33556667777776444322 346788888999999999999996544334445567777774 699999999999998
Q ss_pred hhcC----CC----CCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhH
Q 019402 228 KVHG----WE----TDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFV 299 (341)
Q Consensus 228 ~~~~----~~----~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~ 299 (341)
+..+ .| ..++.++++.+.+ .. +.+++-.|+..+. .++++.+.+.--. | -.-..||+|+...
T Consensus 129 g~~~~~kGVDa~~~~~~~~~~a~~~A~-----~~--~~vvvvTG~vD~I-sdg~~~~~i~nG~-p--ll~~ItGtGCllg 197 (265)
T COG2145 129 GEAGGGKGVDAGDGAADAIEAAKKAAQ-----KY--GTVVVVTGEVDYI-SDGTRVVVIHNGS-P--LLGKITGTGCLLG 197 (265)
T ss_pred cccccccccccccchhhHHHHHHHHHH-----Hh--CcEEEEECCeeEE-EcCCeEEEEECCC-c--HHhhhhccccHHH
Confidence 6442 22 3344555555532 12 2344444664433 3455555443221 1 2345689999888
Q ss_pred HHHHHHHhcCCC-HHHHHHHH
Q 019402 300 GGFLSQLVQEKP-VEDCVRTG 319 (341)
Q Consensus 300 a~~~~~l~~g~~-~~~a~~~A 319 (341)
|...+.+....+ .-+|..-|
T Consensus 198 av~aaF~av~~d~~~~A~~~A 218 (265)
T COG2145 198 AVVAAFLAVEKDPLLDAAAEA 218 (265)
T ss_pred HHHHHHHhcCCCHHHHHHHHH
Confidence 777777776666 34544443
|
|
| >KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0037 Score=53.19 Aligned_cols=165 Identities=16% Similarity=0.248 Sum_probs=106.1
Q ss_pred hhhhcceEEEEeccccccCH---HHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCC-C-CcEEEcCHHHHHHHH
Q 019402 153 SIVEKAKYYYIAGFFLTVSP---ESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP-Y-MDYVFGNETEARTFA 227 (341)
Q Consensus 153 ~~~~~~~~v~i~~~~~~~~~---~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~-~-~dil~~n~~E~~~l~ 227 (341)
..+.+-+++++.+ .+..++ ..+..+++.++++++++++|-.+........+ .++. + .-|+.||.-|+..|+
T Consensus 97 k~L~RlhavVIGP-GLGRdp~~~k~i~~iley~~~~dvP~VIDaDGL~Lv~q~~e---~l~~~~~~viLTPNvvEFkRLc 172 (306)
T KOG3974|consen 97 KLLQRLHAVVIGP-GLGRDPAILKEIAKILEYLRGKDVPLVIDADGLWLVEQLPE---RLIGGYPKVILTPNVVEFKRLC 172 (306)
T ss_pred HHHhheeEEEECC-CCCCCHHHHHHHHHHHHHHhcCCCcEEEcCCceEehhhchh---hhhccCceeeeCCcHHHHHHHH
Confidence 4578889999976 344454 56888999999999999999976554332222 2333 2 356679999999999
Q ss_pred hhcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHH-
Q 019402 228 KVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQL- 306 (341)
Q Consensus 228 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l- 306 (341)
+....+.+... .+..|.. .-....|+-.|+...++..+.+.+..+.. - ...-.-|=||..++.+..-+
T Consensus 173 d~~l~~~d~~~-~~~~L~~------~l~nv~vvqKG~~D~ils~~~ev~~~s~e-G---s~kRcGGQGDiLaGsla~fl~ 241 (306)
T KOG3974|consen 173 DAELDKVDSHS-QMQHLAA------ELMNVTVVQKGESDKILSPDSEVRVCSTE-G---SLKRCGGQGDILAGSLATFLS 241 (306)
T ss_pred HHhhccccchH-HHHHHHH------HhcCeEEEEecCCceeeCCCCeeEEccCC-C---CccccCCCcchhhhHHHHHHH
Confidence 87553333333 3333311 11345777788888766666666555432 1 33445678999988766543
Q ss_pred -h--cCCCHHHHHHHHHHHHhhhhhhccc
Q 019402 307 -V--QEKPVEDCVRTGCYAANVVIQRSGC 332 (341)
Q Consensus 307 -~--~g~~~~~a~~~A~~~aa~~v~~~g~ 332 (341)
+ ...+.+++.-.|..+++..+++.+.
T Consensus 242 w~k~~~~e~~~~~~~a~~a~s~~vr~a~r 270 (306)
T KOG3974|consen 242 WAKLLSGEQDSAAFLAAVAGSIMVRRAGR 270 (306)
T ss_pred HHHhccCCccchhhhhhhhhHHHHHHHHH
Confidence 3 3344557788888888777776554
|
|
| >cd01938 ADPGK_ADPPFK ADP-dependent glucokinase (ADPGK) and phosphofructokinase (ADPPFK) | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.031 Score=52.59 Aligned_cols=170 Identities=15% Similarity=0.058 Sum_probs=91.5
Q ss_pred CceeecCchhHHHHHHHHHHhCCCC-ceEEEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEE-EEeCCeece-
Q 019402 55 NVEYIAGGATQNSIKVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAV-CVVGGERSL- 131 (341)
Q Consensus 55 ~~~~~~GG~~~n~a~~l~~l~~lg~-~v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~-~~~~g~~~~- 131 (341)
....+.||.+.-+|..++. +|. +|.+.+++... .....+...+|-.-.......+.-.-++ .+..|++..
T Consensus 100 ~~~~~mGGnAgimAn~la~---~g~~~Vil~~p~~~k----~~~~L~~d~~i~~p~~e~~~~~d~IHlIlEy~~G~~~~~ 172 (445)
T cd01938 100 WDELRMGGNAGLMANRLAG---EGDLKVLLGVPQSSK----LQAELFLDGPIVVPTFENLIEEDEIHLILEYPRGESWGD 172 (445)
T ss_pred CceEEeCChHHHHHHHHHh---cCCceEEEecCCCcH----HHHHhCCCCCeeecccccCCCCCccEEEEEcCCCCEecc
Confidence 4568999998888888876 446 77777775443 2222222211111101100111222222 222454321
Q ss_pred eecccccccCCccc----CC-CchhH-hhhhc-ceEEEEeccccccC----HHHHHHHHHHHH----h--cCCeEEEeCC
Q 019402 132 VANLSAANCYKSEH----LK-RPEIW-SIVEK-AKYYYIAGFFLTVS----PESIQMVAEHAA----A--KNKVFMMNLS 194 (341)
Q Consensus 132 ~~~~~~~~~~~~~~----~~-~~~~~-~~~~~-~~~v~i~~~~~~~~----~~~~~~~~~~~~----~--~~~~v~~d~~ 194 (341)
+..+-+|+.+-..+ +. .+++. +..+. .|.++++|+.+.-. .....+.++.++ . ..+++.+++.
T Consensus 173 ~~aPraNRfI~~~d~~n~l~~~ee~~~~i~~~~pDl~vlSGlqmm~~~~~~~~~~~~~l~~~~~~l~~l~~~i~iH~E~A 252 (445)
T cd01938 173 FVAPRANRFIFHDDDNNPMLMREEFFSSILEFQPDLAVLSGLQMMEGQSFDEGTRKELLERVKSILEILPPLIPIHLELA 252 (445)
T ss_pred eEcCCCCeEEEecCCcchhhhhHHHHHHHhhcCCCEEEEechhhhcccCCChhhHHHHHHHHHHHHHhccccCcEEEEec
Confidence 11122222111111 11 11222 23333 89999999985221 233333333332 2 3378999998
Q ss_pred cHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcC
Q 019402 195 APFICEFFREPQEKALPYMDYVFGNETEARTFAKVHG 231 (341)
Q Consensus 195 ~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~ 231 (341)
+....+...+.+..+++++|-+=+|++|+..+....+
T Consensus 253 s~~d~~l~~~i~~~ilp~VDSlGmNEqEL~~l~~~lg 289 (445)
T cd01938 253 STVDEELREEILHEVVPYVDSLGLNEQELANLLQVLG 289 (445)
T ss_pred ccccHHHHHHHHHHhcccccccccCHHHHHHHHHHhC
Confidence 7665555677778899999999999999999887544
|
ADPGK and ADPPFK are proteins that rely on ADP rather than ATP to donate a phosphoryl group. They are found in certain hyperthermophilic archaea and in higher eukaryotes. A functional ADPGK has been characterized in mouse and is assumed to be desirable during ischemia/hypoxia. ADPGK and ADPPFK contain a large and a small domain with the binding site located in a groove between the domains. Partial domain closing is seen when ADP is bound, and further domain closing is observed when glucose is also bound. The oligomerization state apparently varies depending on the species, with some existing as monomers, some as dimers, and some as tetramers. |
| >COG0063 Predicted sugar kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.33 Score=43.00 Aligned_cols=138 Identities=20% Similarity=0.112 Sum_probs=75.7
Q ss_pred hhcceEEEEeccccccCHHHHHHHHHHHHhcC-CeEEEeCCcHHHHhhhhHHHHhhCCC-CcEEEcCHHHHHHHHhhcC-
Q 019402 155 VEKAKYYYIAGFFLTVSPESIQMVAEHAAAKN-KVFMMNLSAPFICEFFREPQEKALPY-MDYVFGNETEARTFAKVHG- 231 (341)
Q Consensus 155 ~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~-~~v~~d~~~~~~~~~~~~~~~~~l~~-~dil~~n~~E~~~l~~~~~- 231 (341)
.+..|.+.+.+ .+....+ ..++++..-+.. .++++|......- ......... .-|+.|..-|++.|++...
T Consensus 99 ~~~~~avviGp-GlG~~~~-~~~~~~~~l~~~~~p~ViDADaL~~l----a~~~~~~~~~~~VlTPH~gEf~rL~g~~~~ 172 (284)
T COG0063 99 VERADAVVIGP-GLGRDAE-GQEALKELLSSDLKPLVLDADALNLL----AELPDLLDERKVVLTPHPGEFARLLGTEVD 172 (284)
T ss_pred hccCCEEEECC-CCCCCHH-HHHHHHHHHhccCCCEEEeCcHHHHH----HhCcccccCCcEEECCCHHHHHHhcCCccc
Confidence 45788999874 2233332 233333333333 7889998653310 011122222 2666699999999987322
Q ss_pred CCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcC
Q 019402 232 WETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE 309 (341)
Q Consensus 232 ~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g 309 (341)
....+..+.++.+.+. ...+||=.|..-.....+++.+..+.-. .-.-+=|.||+.++-+.+-|+++
T Consensus 173 ~~~~~r~~~a~~~a~~-------~~~vvVLKG~~tvI~~~~g~~~~n~~G~----~~ma~GGtGDvLaGii~alLAq~ 239 (284)
T COG0063 173 EIEVDRLEAARELAAK-------YGAVVVLKGAVTVIADPDGEVFVNPTGN----PGMATGGTGDVLAGIIGALLAQG 239 (284)
T ss_pred ccccchHHHHHHHHHH-------cCCEEEEeCCCCEEEcCCCcEEEcCCCC----HHhccCcchHHHHHHHHHHHhCC
Confidence 2223445566666321 2335555677555544344555443221 23456789999887776667777
|
|
| >COG4809 Archaeal ADP-dependent phosphofructokinase/glucokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.75 E-value=2.6 Score=38.60 Aligned_cols=79 Identities=16% Similarity=0.048 Sum_probs=57.7
Q ss_pred hhhhcceEEEEecccccc------C-----HHHHHHHHHHHHh-cCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCH
Q 019402 153 SIVEKAKYYYIAGFFLTV------S-----PESIQMVAEHAAA-KNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNE 220 (341)
Q Consensus 153 ~~~~~~~~v~i~~~~~~~------~-----~~~~~~~~~~~~~-~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~ 220 (341)
+...+.|...++|+..-. + -+...+-++..++ .++++.+++.........+..+.++++.++-+=+|+
T Consensus 221 ~i~~~vDgaiiSGyq~l~eey~dg~t~~~yle~s~e~i~~lk~~~~irvHlEfas~~d~~irk~i~~~il~~v~SvGldE 300 (466)
T COG4809 221 EIAKEVDGAIISGYQGLKEEYSDGSTYKYYLERSREDIKALKDRENIRVHLEFASIQDRKIRKEILTNILSIVYSVGLDE 300 (466)
T ss_pred HHhhhcceeeeechhhhhhhcCCCCcHHHHHHHHHHHHHHHhccccceEEEEecccccHHHHHHHHHHHHhhhhhcCCCH
Confidence 455679999999987411 1 1234444555566 778899999876655666777888999999999999
Q ss_pred HHHHHHHhhcC
Q 019402 221 TEARTFAKVHG 231 (341)
Q Consensus 221 ~E~~~l~~~~~ 231 (341)
.|...+....+
T Consensus 301 ~ElA~vl~vlG 311 (466)
T COG4809 301 VELANVLNVLG 311 (466)
T ss_pred HHHHHHHHhhC
Confidence 99998876554
|
|
| >KOG4184 consensus Predicted sugar kinase [Carbohydrate transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=92.93 E-value=1 Score=40.42 Aligned_cols=166 Identities=14% Similarity=0.150 Sum_probs=90.0
Q ss_pred CCceeecCchhHHHHHHHHHHhCCCCceEEEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeece-e
Q 019402 54 ENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSL-V 132 (341)
Q Consensus 54 ~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~-~ 132 (341)
.....+.||++.-+|.-.. .. ..++++|+.|.-.. +- |--.-+.+..-+++.++-. -++.+..|+..- .
T Consensus 136 ~R~~~~mGGNA~LMA~R~~--~~--~~~~LlG~~~~R~~----~~-L~P~~~R~~~~~I~~DdiH-lILEYK~Gd~~G~~ 205 (478)
T KOG4184|consen 136 ERINWYMGGNAPLMAVRFF--ME--GAQVLLGAHMSRKL----RP-LLPKEIRLAGDEIPNDDIH-LILEYKAGDKWGPY 205 (478)
T ss_pred hhhhhhccCCchHHHHHHH--hc--cceeeecccccchh----cc-ccchhhhcccCcCcCCceE-EEEEeccCCccccc
Confidence 4667899998777666544 12 58999999886422 11 1111133333333322221 122233454422 1
Q ss_pred ecccccccCCcccCC------CchhHhhhh--cceEEEEecccc-cc-CHHH----HHHHHHHHH--hcCCeEEEeCCcH
Q 019402 133 ANLSAANCYKSEHLK------RPEIWSIVE--KAKYYYIAGFFL-TV-SPES----IQMVAEHAA--AKNKVFMMNLSAP 196 (341)
Q Consensus 133 ~~~~~~~~~~~~~~~------~~~~~~~~~--~~~~v~i~~~~~-~~-~~~~----~~~~~~~~~--~~~~~v~~d~~~~ 196 (341)
.-+.+++.+...+-. -+.+.+.++ +.|+++++|..+ ++ +.+. +..+-+.+- ..|+++.+++.+.
T Consensus 206 VAP~anR~I~~~D~~n~~m~~~E~f~~Al~~fqPdLvVvsGlhmme~qske~r~~rl~~V~r~L~~iP~gip~HlElaS~ 285 (478)
T KOG4184|consen 206 VAPRANRYILHNDRNNPHMRAVEQFTDALKMFQPDLVVVSGLHMMEMQSKEEREARLQQVVRSLSDIPTGIPVHLELASM 285 (478)
T ss_pred ccccccceeeecCCCChHHHHHHHHHHHHHHhCCCEEEEechhHHhhhhHHHHHHHHHHHHHHHhcCCCCCchhhhHhHH
Confidence 222333322222111 112223332 569999999874 33 2222 222222222 2567888888766
Q ss_pred HHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhh
Q 019402 197 FICEFFREPQEKALPYMDYVFGNETEARTFAKV 229 (341)
Q Consensus 197 ~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~ 229 (341)
.......+.+...++++|-+=+|++|+..|...
T Consensus 286 ~~~~l~~~i~h~VlPyVdSLGlNEQEL~fL~q~ 318 (478)
T KOG4184|consen 286 TNRELMSSIVHQVLPYVDSLGLNEQELLFLTQS 318 (478)
T ss_pred HHHHHHHHHHHHhhhhccccCCCHHHHHHHHHH
Confidence 544445566778999999999999999988764
|
|
| >PRK10076 pyruvate formate lyase II activase; Provisional | Back alignment and domain information |
|---|
Probab=91.22 E-value=0.88 Score=38.64 Aligned_cols=68 Identities=12% Similarity=-0.038 Sum_probs=50.6
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEc-----CHHHHHHHHh
Q 019402 157 KAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFG-----NETEARTFAK 228 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~-----n~~E~~~l~~ 228 (341)
....|.++|-.+.+.++.+.++++.+++.|+.+.+|..+.. ..+.+.++++++|.+.+ +.+.-+.+++
T Consensus 38 sggGVt~SGGEPllq~~fl~~l~~~~k~~gi~~~leTnG~~----~~~~~~~l~~~~D~~l~DiK~~d~~~~~~~tG 110 (213)
T PRK10076 38 SGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDA----PASKLLPLAKLCDEVLFDLKIMDATQARDVVK 110 (213)
T ss_pred CCCEEEEeCchHHcCHHHHHHHHHHHHHcCCCEEEECCCCC----CHHHHHHHHHhcCEEEEeeccCCHHHHHHHHC
Confidence 34689999877777889999999999999999999998755 23446667777777655 4444455554
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 341 | ||||
| 1bx4_A | 345 | Structure Of Human Adenosine Kinase At 1.50 Angstro | 1e-116 | ||
| 3loo_A | 365 | Crystal Structure Of Anopheles Gambiae Adenosine Ki | 1e-104 | ||
| 2xtb_A | 347 | Crystal Structure Of Trypanosoma Brucei Rhodesiense | 8e-72 | ||
| 3vaq_A | 372 | Adenosine Kinase From Schistosoma Mansoni In Comple | 4e-69 | ||
| 3uq6_A | 372 | Adenosine Kinase From Schistosoma Mansoni In Comple | 4e-69 | ||
| 3vas_A | 370 | Adenosine Kinase From Schistosoma Mansoni In Comple | 5e-69 | ||
| 1lio_A | 363 | Structure Of Apo T. Gondii Adenosine Kinase Length | 7e-45 | ||
| 1lii_A | 363 | Structure Of T. Gondii Adenosine Kinase Bound To Ad | 1e-44 | ||
| 1dgm_A | 363 | Crystal Structure Of Adenosine Kinase From Toxoplas | 2e-44 | ||
| 2abs_A | 383 | Crystal Structure Of T. Gondii Adenosine Kinase Com | 1e-43 | ||
| 4e3a_A | 352 | Crystal Structure Of Probable Sugar Kinase Protein | 7e-15 | ||
| 3ubo_A | 354 | The Crystal Structure Of Adenosine Kinase From Sino | 1e-13 | ||
| 1rk2_A | 309 | E. Coli Ribokinase Complexed With Ribose And Adp, S | 9e-09 | ||
| 3lhx_A | 319 | Crystal Structure Of A Ketodeoxygluconokinase (Kdgk | 2e-08 | ||
| 3h49_A | 325 | Crystal Structure Of A Putative Ribokinase (Apo For | 7e-08 | ||
| 2fv7_A | 331 | Crystal Structure Of Human Ribokinase Length = 331 | 2e-07 | ||
| 1tz6_A | 339 | Crystal Structure Of Aminoimidazole Riboside Kinase | 3e-06 | ||
| 1tyy_A | 339 | Crystal Structure Of Aminoimidazole Riboside Kinase | 5e-06 | ||
| 1v19_A | 309 | 2-Keto-3-Deoxygluconate Kinase From Thermus Thermop | 5e-06 | ||
| 1vm7_A | 311 | Crystal Structure Of Ribokinase (Tm0960) From Therm | 1e-05 | ||
| 2nwh_A | 317 | Carbohydrate Kinase From Agrobacterium Tumefaciens | 2e-05 | ||
| 2c49_A | 302 | Crystal Structure Of Methanocaldococcus Jannaschii | 1e-04 | ||
| 3q1y_A | 320 | Allosteric Regulation By Lysine Residue: A Novel An | 2e-04 | ||
| 3hic_A | 320 | The Crystal Structure Of Phosphofructokinase(Lin219 | 2e-04 |
| >pdb|1BX4|A Chain A, Structure Of Human Adenosine Kinase At 1.50 Angstroms Length = 345 | Back alignment and structure |
|
| >pdb|3LOO|A Chain A, Crystal Structure Of Anopheles Gambiae Adenosine Kinase In Complex With P1,P4-Di(Adenosine-5) Tetraphosphate Length = 365 | Back alignment and structure |
|
| >pdb|2XTB|A Chain A, Crystal Structure Of Trypanosoma Brucei Rhodesiense Adenosine Kinase Complexed With Activator Length = 347 | Back alignment and structure |
|
| >pdb|3VAQ|A Chain A, Adenosine Kinase From Schistosoma Mansoni In Complex With Adenosine Length = 372 | Back alignment and structure |
|
| >pdb|3UQ6|A Chain A, Adenosine Kinase From Schistosoma Mansoni In Complex With Adenosine And Amp Length = 372 | Back alignment and structure |
|
| >pdb|3VAS|A Chain A, Adenosine Kinase From Schistosoma Mansoni In Complex With Adenosine In Occluded Loop Conformation Length = 370 | Back alignment and structure |
|
| >pdb|1LIO|A Chain A, Structure Of Apo T. Gondii Adenosine Kinase Length = 363 | Back alignment and structure |
|
| >pdb|1LII|A Chain A, Structure Of T. Gondii Adenosine Kinase Bound To Adenosine 2 And Amp-Pcp Length = 363 | Back alignment and structure |
|
| >pdb|1DGM|A Chain A, Crystal Structure Of Adenosine Kinase From Toxoplasma Gondii Length = 363 | Back alignment and structure |
|
| >pdb|2ABS|A Chain A, Crystal Structure Of T. Gondii Adenosine Kinase Complexed With Amp-Pcp Length = 383 | Back alignment and structure |
|
| >pdb|4E3A|A Chain A, Crystal Structure Of Probable Sugar Kinase Protein From Rhizobium Etli Cfn 42 Length = 352 | Back alignment and structure |
|
| >pdb|3UBO|A Chain A, The Crystal Structure Of Adenosine Kinase From Sinorhizobium Meliloti Length = 354 | Back alignment and structure |
|
| >pdb|1RK2|A Chain A, E. Coli Ribokinase Complexed With Ribose And Adp, Solved In Space Group P212121 Length = 309 | Back alignment and structure |
|
| >pdb|3LHX|A Chain A, Crystal Structure Of A Ketodeoxygluconokinase (Kdgk) From Shigella Flexneri Length = 319 | Back alignment and structure |
|
| >pdb|3H49|A Chain A, Crystal Structure Of A Putative Ribokinase (Apo Form) From E.Coli At 1.8a Resolution Length = 325 | Back alignment and structure |
|
| >pdb|2FV7|A Chain A, Crystal Structure Of Human Ribokinase Length = 331 | Back alignment and structure |
|
| >pdb|1TZ6|A Chain A, Crystal Structure Of Aminoimidazole Riboside Kinase From Salmonella Enterica Complexed With Aminoimidazole Riboside And Atp Analog Length = 339 | Back alignment and structure |
|
| >pdb|1TYY|A Chain A, Crystal Structure Of Aminoimidazole Riboside Kinase From Salmonella Enterica Length = 339 | Back alignment and structure |
|
| >pdb|1V19|A Chain A, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus Length = 309 | Back alignment and structure |
|
| >pdb|1VM7|A Chain A, Crystal Structure Of Ribokinase (Tm0960) From Thermotoga Maritima At 2.15 A Resolution Length = 311 | Back alignment and structure |
|
| >pdb|2NWH|A Chain A, Carbohydrate Kinase From Agrobacterium Tumefaciens Length = 317 | Back alignment and structure |
|
| >pdb|2C49|A Chain A, Crystal Structure Of Methanocaldococcus Jannaschii Nucleoside Kinase - An Archaeal Member Of The Ribokinase Family Length = 302 | Back alignment and structure |
|
| >pdb|3Q1Y|A Chain A, Allosteric Regulation By Lysine Residue: A Novel Anion-Hole Formation In The Ribokinase Family Length = 320 | Back alignment and structure |
|
| >pdb|3HIC|A Chain A, The Crystal Structure Of Phosphofructokinase(Lin2199)from Listeria Innocua Length = 320 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 341 | |||
| 3otx_A | 347 | Adenosine kinase, putative; AP5A, transferase-tran | 1e-170 | |
| 3loo_A | 365 | Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad | 1e-170 | |
| 1bx4_A | 345 | Protein (adenosine kinase); human adenosine kinase | 1e-166 | |
| 2abs_A | 383 | Adenosine kinase, AK; ribokinase fold, alpha/beta, | 1e-147 | |
| 4e3a_A | 352 | Sugar kinase protein; structural genomics, protein | 2e-52 | |
| 2hlz_A | 312 | Ketohexokinase; non-protein kinase, creatine kinas | 1e-46 | |
| 2c4e_A | 302 | Sugar kinase MJ0406; transferase, nucleoside kinas | 3e-37 | |
| 3h49_A | 325 | Ribokinase; transferase,PFKB family,sugar kinase Y | 4e-36 | |
| 2pkf_A | 334 | Adenosine kinase; transferase, S genomics, TB stru | 6e-36 | |
| 3b1n_A | 326 | Ribokinase, putative; rossmann fold, ATP binding, | 3e-34 | |
| 3kzh_A | 328 | Probable sugar kinase; NYSGXRC, PSI-II, protein st | 1e-33 | |
| 4e69_A | 328 | 2-dehydro-3-deoxygluconokinase; putative sugar kin | 1e-33 | |
| 3lhx_A | 319 | Ketodeoxygluconokinase; structural genomics, PSI-2 | 5e-33 | |
| 3bf5_A | 306 | Ribokinase related protein; 10640157, putative rib | 7e-32 | |
| 3hj6_A | 327 | Fructokinase, FRK; fructose, transferase, carbohyd | 2e-31 | |
| 2nwh_A | 317 | AGR_C_3442P, carbohydrate kinase; structural genom | 3e-31 | |
| 4du5_A | 336 | PFKB; structural genomics, PSI-biology, NEW YORK s | 3e-30 | |
| 1rkd_A | 309 | Ribokinase; carbohydrate kinase, ribose, nucleotid | 9e-30 | |
| 3iq0_A | 330 | Putative ribokinase II; transferase,kinase,SAD,rib | 2e-29 | |
| 2qhp_A | 296 | Fructokinase; NP_810670.1, PFKB family carbohydrat | 2e-29 | |
| 3pl2_A | 319 | Sugar kinase, ribokinase family; PFKB PFAM motif, | 2e-29 | |
| 2dcn_A | 311 | Hypothetical fructokinase; 2-keto-3-deoxygluconate | 8e-29 | |
| 1vk4_A | 298 | PFKB carbohydrate kinase TM0415; structural genomi | 1e-28 | |
| 2qcv_A | 332 | Putative 5-dehydro-2-deoxygluconokinase; structura | 2e-28 | |
| 3ry7_A | 304 | Ribokinase; transferase; 2.15A {Staphylococcus aur | 2e-28 | |
| 1tyy_A | 339 | Putative sugar kinase; ribokinase fold, alpha/beta | 3e-28 | |
| 1vm7_A | 311 | Ribokinase; TM0960, structural genomics, JCSG, pro | 9e-28 | |
| 2v78_A | 313 | Fructokinase; transferase, PFKB family carbohydrat | 1e-27 | |
| 2rbc_A | 343 | Sugar kinase, AGR_C_4560P; ribokinase family, ATP- | 5e-27 | |
| 2fv7_A | 331 | Ribokinase; structural genomics, structural genomi | 9e-27 | |
| 1v1a_A | 309 | 2-keto-3-deoxygluconate kinase; ATP, structural ge | 6e-26 | |
| 3ikh_A | 299 | Carbohydrate kinase; transferase,kinase,SAD,ribose | 7e-26 | |
| 3ewm_A | 313 | Uncharacterized sugar kinase PH1459; carbohydrate | 2e-25 | |
| 3kd6_A | 313 | Carbohydrate kinase, PFKB family; nucleoside kinas | 4e-25 | |
| 3ljs_A | 338 | Fructokinase; fructokianse, PSI2, NYSGXRC, structu | 2e-24 | |
| 3go6_A | 310 | Ribokinase RBSK; phosphofructokinase, carbohydrate | 3e-24 | |
| 3ktn_A | 346 | Carbohydrate kinase, PFKB family; PFKB family,ribo | 1e-19 | |
| 2afb_A | 351 | 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro- | 8e-19 | |
| 3cqd_A | 309 | 6-phosphofructokinase isozyme 2; phosphofructokina | 2e-07 | |
| 2jg1_A | 330 | Tagatose-6-phosphate kinase; phosphoryl transfer, | 2e-07 | |
| 2f02_A | 323 | Tagatose-6-phosphate kinase; LACC, structural geno | 2e-07 | |
| 2abq_A | 306 | Fructose 1-phosphate kinase; dimer, structural gen | 2e-07 | |
| 2jg5_A | 306 | Fructose 1-phosphate kinase; 1-phosphofructokinase | 3e-07 | |
| 3ie7_A | 320 | LIN2199 protein; phosphofructokinases, transferase | 3e-07 | |
| 2ajr_A | 331 | Sugar kinase, PFKB family; TM0828, possible 1-phos | 3e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 |
| >3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A* Length = 347 | Back alignment and structure |
|---|
Score = 476 bits (1226), Expect = e-170
Identities = 132/337 (39%), Positives = 196/337 (58%), Gaps = 2/337 (0%)
Query: 7 LLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQN 66
+ NPLLD+SA V +EFL KY ++ AIL ++ ++D++ NV Y+ GG+ N
Sbjct: 10 VYVQCNPLLDVSAHVSDEFLVKYGLERGTAILLSERQKGIFDDIEKMPNVRYVPGGSGLN 69
Query: 67 SIKVAQWML--QIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCV 124
+VAQWM +Y+GCI D++G+ +K+ + G+ + A +G CAVC+
Sbjct: 70 VARVAQWMQQAYKGKFVTYVGCIADDRYGKVLKEAAEHEGIVMAVEHTTKAGSGACAVCI 129
Query: 125 VGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAA 184
G ER+LVA+L AAN SEH++ P + +++++ +Y +GF LTV + A
Sbjct: 130 TGKERTLVADLGAANHLSSEHMRSPAVVRAMDESRIFYFSGFTLTVDVNHVLQACRKARE 189
Query: 185 KNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKI 244
+ +FM+NLSAPFI +FF + LPY D + N EA+ FA + W+TD VEEIA +
Sbjct: 190 VDGLFMINLSAPFIMQFFSAQLGEVLPYTDIIVANRHEAKEFANMMKWDTDCVEEIARRA 249
Query: 245 SQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLS 304
+GT R+ V T+ + V+A V+ PV L ++K++D NGAGDAF+GGFLS
Sbjct: 250 VSEVPYTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMGGFLS 309
Query: 305 QLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
K + C TG Y A VIQR GC++P KP F+
Sbjct: 310 AYAVGKDLRRCCETGHYTAQEVIQRDGCSFPEKPSFS 346
|
| >3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae} Length = 365 | Back alignment and structure |
|---|
Score = 476 bits (1226), Expect = e-170
Identities = 175/339 (51%), Positives = 249/339 (73%), Gaps = 2/339 (0%)
Query: 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGA 63
+G+L+G+GNPLLDISAVV+++ L KYD++ NNAILAE+KH+PMY EL K EYIAGG+
Sbjct: 23 DGMLVGLGNPLLDISAVVEKDLLNKYDMQPNNAILAEEKHMPMYQELIEKYQAEYIAGGS 82
Query: 64 TQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVC 123
QNS++VAQW+LQ P + GC+G+D++ +++ +T+ GVNV+Y ++PTGTCAV
Sbjct: 83 VQNSLRVAQWILQRPRTAIFFGCVGQDEYARILEERATSNGVNVQYQRSATSPTGTCAVL 142
Query: 124 VVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAA 183
V G +RSL ANL+AAN + EHL+ + ++ A+++Y++GFF TVS ES VA+ AA
Sbjct: 143 VTGTQRSLCANLAAANDFTPEHLRSDGNRAYLQGAQFFYVSGFFFTVSFESALSVAKEAA 202
Query: 184 AKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALK 243
A ++FMMNLSAPF+ +F++ E+ PY+D +FGNETEA AK + T+++ EI +
Sbjct: 203 ATGRMFMMNLSAPFVPQFYKNNLEEIFPYVDVLFGNETEAIALAKEFNYGTEDLREIGKR 262
Query: 244 ISQWPKASGTHKRITVITQGADPVVVAEDG--KVKLFPVILLPKEKLVDTNGAGDAFVGG 301
I+ PK +G KRI +ITQG+DPV++ E G V+ FPV L E++VDTNGAGDAFVGG
Sbjct: 263 IAALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFVGG 322
Query: 302 FLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEF 340
FL+QL+Q + V+ C++ G +AA +IQRSGCT+ +P F
Sbjct: 323 FLAQLLQSRTVDVCIKCGIWAAREIIQRSGCTFEGEPSF 361
|
| >1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A* Length = 345 | Back alignment and structure |
|---|
Score = 467 bits (1203), Expect = e-166
Identities = 193/340 (56%), Positives = 254/340 (74%), Gaps = 2/340 (0%)
Query: 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGA 63
E IL GMGNPLLDISAVVD++FL KY +K N+ ILAEDKH ++DEL K VEY AGG+
Sbjct: 6 ENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGS 65
Query: 64 TQNSIKVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAV 122
TQNSIKVAQWM+Q P A ++ GCIG DKFGE +K+ + A V+ YYE PTGTCA
Sbjct: 66 TQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAA 125
Query: 123 CVVGGERSLVANLSAANCYKSE-HLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEH 181
C+ G RSL+ANL+AANCYK E HL + W +VEKA+ YIAGFFLTVSPES+ VA H
Sbjct: 126 CITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLKVAHH 185
Query: 182 AAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIA 241
A+ N++F +NLSAPFI +F++E K +PY+D +FGNETEA TFA+ G+ET +++EIA
Sbjct: 186 ASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEIA 245
Query: 242 LKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGG 301
K PK + +RI + TQG D ++A + +V F V+ +++++DTNGAGDAFVGG
Sbjct: 246 KKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGG 305
Query: 302 FLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
FLSQLV +KP+ +C+R G YAA+++I+R+GCT+P KP+F+
Sbjct: 306 FLSQLVSDKPLTECIRAGHYAASIIIRRTGCTFPEKPDFH 345
|
| >2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A* Length = 383 | Back alignment and structure |
|---|
Score = 418 bits (1077), Expect = e-147
Identities = 107/350 (30%), Positives = 170/350 (48%), Gaps = 24/350 (6%)
Query: 7 LLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQN 66
+ +GNP+LD+ A V FL ++ +K +A LA + + +Y L + N + GG+ N
Sbjct: 35 VFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTL-DQFNPTSLPGGSALN 93
Query: 67 SIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVG 126
S++V Q +L+ PG+ Y+G IG D G+ +K+ G+ ++ TG CAV +
Sbjct: 94 SVRVVQKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINE 153
Query: 127 GERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAA-AK 185
ER+L +L A ++ + A +Y + LT +P++ VA +A
Sbjct: 154 KERTLCTHLGACGSFRLPEDW----TTFASGALIFYATAYTLTATPKNALEVAGYAHGIP 209
Query: 186 NKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIAL--- 242
N +F +NLSAPF E +++ + L + + +FGNE E AKVH ++
Sbjct: 210 NAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKTALSTANK 269
Query: 243 ----------KISQWPKASGTHKRITVITQGADPVVVAEDGK-----VKLFPVILLPKEK 287
+ + ++ V+T+G +PV+ AE V V ++ EK
Sbjct: 270 EHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEK 329
Query: 288 LVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPK 337
+VDTNGAGDAFVGGFL L Q K V+ C+ G A VIQ G +
Sbjct: 330 IVDTNGAGDAFVGGFLYALSQGKTVKQCIMCGNACAQDVIQHVGFSLSFT 379
|
| >4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A* Length = 352 | Back alignment and structure |
|---|
Score = 175 bits (446), Expect = 2e-52
Identities = 84/332 (25%), Positives = 138/332 (41%), Gaps = 31/332 (9%)
Query: 7 LLGMGNPLLDISAVVDEEFLKKYDIKLNNAILA-EDKHLPMYDELASKENVEYIAGGATQ 65
+L +GN ++DI + +++FL I L ++ +Y + +GG+
Sbjct: 28 VLTVGNAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMGPAL---EASGGSAG 84
Query: 66 NSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPTGTCAVCV 124
N+ + G +Y G + D+ G+ + A GV+ + + PT + V
Sbjct: 85 NTAAGVA---NLGGKAAYFGNVAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFV 141
Query: 125 V-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAG--FFLTVSPESIQMVAEH 181
GERS+ L A E ++ +V AK Y G + + E+I A
Sbjct: 142 TEDGERSMNTYLGACVELGPEDVEA----DVVADAKVTYFEGYLWDPPRAKEAILDCARI 197
Query: 182 AAAKNKVFMMNLSAPFICEFFREPQEKALP--YMDYVFGNETEARTFAKVHGWETDNVEE 239
A + M LS F + +R + +D VF N EA + +TD+ EE
Sbjct: 198 AHQHGREMSMTLSDSFCVDRYRGEFLDLMRSGKVDIVFANRQEALSLY-----QTDDFEE 252
Query: 240 IALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFV 299
+I+ K I +T + V+ + + I ++VDT GAGD F
Sbjct: 253 ALNRIAADCK-------IAAVTMSENGAVILKGRERYYVNAI--RIREVVDTTGAGDLFA 303
Query: 300 GGFLSQLVQEKPVEDCVRTGCYAANVVIQRSG 331
GFL Q + +EDC + GC AA +VIQ+ G
Sbjct: 304 SGFLYGYTQGRSLEDCGKLGCLAAGIVIQQIG 335
|
| >2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A Length = 312 | Back alignment and structure |
|---|
Score = 159 bits (405), Expect = 1e-46
Identities = 54/329 (16%), Positives = 110/329 (33%), Gaps = 45/329 (13%)
Query: 7 LLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQN 66
+L +G +LD+ ++VD P D + + GG N
Sbjct: 20 ILCVGLVVLDVISLVD--------------------KYPKEDSEIRCLSQRWQRGGNASN 59
Query: 67 SIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPTGTCAVCVV 125
S + + +++G + + + + V+++Y + V +
Sbjct: 60 SCTILS---LLGAPCAFMGSMAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIIN 116
Query: 126 --GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAA 183
G R+++ + + ++ ++ + K+ +I G + + +Q + H
Sbjct: 117 EASGSRTILYYDRSLPDVSATDFEKVDL----TQFKWIHIEGRNASEQVKMLQRIDAHNT 172
Query: 184 AKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALK 243
+ + E RE + Y D VF ++ A+ + EE
Sbjct: 173 RQPPE--QKIRVSVEVEKPREELFQLFGYGDVVFVSKDVAKHLG------FQSAEEALRG 224
Query: 244 ISQWPKASGTHKRITVITQGADPVVVA-EDGKVKLFPVILLPKEKLVDTNGAGDAFVGGF 302
+ + V + DGK+ P ++VDT GAGD F
Sbjct: 225 LYG----RVRKGAVLVCAWAEEGADALGPDGKLLHSDAF--PPPRVVDTLGAGDTFNASV 278
Query: 303 LSQLVQEKPVEDCVRTGCYAANVVIQRSG 331
+ L Q + V++ +R GC A G
Sbjct: 279 IFSLSQGRSVQEALRFGCQVAGKKCGLQG 307
|
| >2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A Length = 302 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 3e-37
Identities = 48/295 (16%), Positives = 105/295 (35%), Gaps = 38/295 (12%)
Query: 42 KHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNST 101
+ P + + GGA N A + ++ + + C+G D ++
Sbjct: 23 EKFPEPNTSIQIPSARKYYGGAAAN---TAVGIKKLGVNSELLSCVGYDFKNSGYERYLK 79
Query: 102 AAGVNVKY-YEDESAPTGTCAVCVV--GGERSLVANLSAANCYKSEHLKRPEIWSIVEKA 158
+N+ Y E T A + AA YK +
Sbjct: 80 NLDINISKLYYSEEEETPK-AWIFTDKDNNQITFFLWGAAKHYKELNPPN-------FNT 131
Query: 159 KYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLS-APFICEFFREPQEKALPYMDYVF 217
+ + ++ + + A +++ + ++ +E + + + +++F
Sbjct: 132 E-------IVHIATGDPEFNLKCAKKAYGNNLVSFDPGQDLPQYSKEMLLEIIEHTNFLF 184
Query: 218 GNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKL 277
N+ E + + +E +++ ++ ++T+G+ V+ K
Sbjct: 185 MNKHEFERASNLLNFE---IDDYLERVDAL-----------IVTKGSKGSVIYTKDKKIE 230
Query: 278 FPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGC 332
P I K++D GAGD++ GFLS V+ +E C G A+ V++ GC
Sbjct: 231 IPCI--KAGKVIDPTGAGDSYRAGFLSAYVKGYDLEKCGLIGAATASFVVEAKGC 283
|
| >3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* Length = 325 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 4e-36
Identities = 58/308 (18%), Positives = 107/308 (34%), Gaps = 42/308 (13%)
Query: 37 ILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGA------TSYIGCIGKD 90
L + E + GG N + T+ + IGKD
Sbjct: 19 PLQPVSKNIFDVDSYPLERIAMTTGGDAIN---------EATIISRLGHRTALMSRIGKD 69
Query: 91 KFGEEMKKNSTAAGVNVKY-YEDESAPTGTCAVCVV-GGERS-LVANLSAANCYKSEHLK 147
G+ + + ++++ +D S T V GER+ + + + +
Sbjct: 70 AAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVD 129
Query: 148 RPEIWSIVEKAKYYYIAGFFLT--VSPESIQMVAEHAAAKN-KVFMMNLS-APFICEFFR 203
+AK +A F + + +++ + A A+ + +
Sbjct: 130 FARF----SQAKLLSLASIFNSPLLDGKALTEIFTQAKARQMIICADMIKPRL---NETL 182
Query: 204 EPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQG 263
+ +AL Y+DY+F N EA+ + ++EIA A G + VI G
Sbjct: 183 DDICEALSYVDYLFPNFAEAKLLT-----GKETLDEIADCF----LACGV--KTVVIKTG 231
Query: 264 ADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAA 323
D + P + +DT GAGD F GF++ L++ K + +C R A
Sbjct: 232 KDGCFIKRGDMTMKVPAV--AGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATA 289
Query: 324 NVVIQRSG 331
+ + G
Sbjct: 290 AISVLSVG 297
|
| >2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* Length = 334 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 6e-36
Identities = 53/265 (20%), Positives = 91/265 (34%), Gaps = 29/265 (10%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPTGTCAVCV-VGGERSLVANLS 136
G + +G G D + A GVN + E+A T V +
Sbjct: 72 GEVALVGAAGADFAD--YRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYPG 129
Query: 137 AANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAP 196
A + ++ L ++ S + K + I PE++ + E F + +
Sbjct: 130 AMSEARNIKL--ADVVSAIGKPELVIIG----ANDPEAMFLHTEECRKLGLAFAADP-SQ 182
Query: 197 FICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKR 256
+ E + + Y+F N+ E GW ++ +I
Sbjct: 183 QLARLSGEEIRRLVNGAAYLFTNDYEWDLLLSKTGWSE---ADVMAQI-----------D 228
Query: 257 ITVITQGADPVVVAE-DGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDC 315
+ V T G V + E DG V+ P+ D G GDAF GFL+ +E
Sbjct: 229 LRVTTLGPKGVDLVEPDGTTIHVGVV--PETSQTDPTGVGDAFRAGFLTGRSAGLGLERS 286
Query: 316 VRTGCYAANVVIQRSGC-TYPPKPE 339
+ G A +V++ +G + E
Sbjct: 287 AQLGSLVAVLVLESTGTQEWQWDYE 311
|
| >3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* Length = 326 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 3e-34
Identities = 42/257 (16%), Positives = 80/257 (31%), Gaps = 32/257 (12%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPTGTCAVCVV--GGERSLVANL 135
G +G +G + A G++ +Y + A+ + +
Sbjct: 62 GDARMMGTLGAV-DAQPYLDRMDALGLSREYVRVLPDTYSAQ-AMITTDLDNNQITAFHP 119
Query: 136 SAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSA 195
A H +AK +A + + E A F+ +
Sbjct: 120 GAMMQSHVNH---------AGEAKDIKLAIVGPDG-FQGMVQHTEELAQAGVPFIFDP-G 168
Query: 196 PFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHK 255
+ F +++ Y+ N+ EA+ GW + +EIA ++
Sbjct: 169 QGLPLFDGATLRRSIELATYIAVNDYEAKLVCDKTGW---SEDEIASRV----------- 214
Query: 256 RITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDC 315
+ +IT+G + + P + E+++D G GDAF GG L +
Sbjct: 215 QALIITRGEHGATIRHRDGTEQIPAV--RAERVIDPTGCGDAFRGGLLYGIEHGFDWATA 272
Query: 316 VRTGCYAANVVIQRSGC 332
R + I G
Sbjct: 273 GRLASLMGALKIAHQGP 289
|
| >3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} Length = 328 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 1e-33
Identities = 43/258 (16%), Positives = 92/258 (35%), Gaps = 31/258 (12%)
Query: 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPTGTCAVCVV---GGERSLVANLS 136
T+++ +G D+ G+ + ++S G ++ E T T + ++ G S +A++
Sbjct: 59 TNFMSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPT-YLAILDENGEMVSAIADMK 117
Query: 137 AANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLT---VSPESIQMVAEHAAAKNKVFMMNL 193
+ ++ + I E A+Y + ++ N +
Sbjct: 118 SIGAMNTDFIDS--KREIFENAEY------TVLDSDNPEIMEYLLKNFKDKTNFILDPV- 168
Query: 194 SAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGT 253
SA + + + N EA A G+ + ++ +K S + G
Sbjct: 169 SAEKA-----SWVKHLIKDFHTIKPNRHEAEILA---GFPITDTDD-LIKASNYFLGLGI 219
Query: 254 HKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVE 313
+ I+ AD + + + + + GAGD+FV G + + P+E
Sbjct: 220 --KKVFISLDADGIFYNDGVSCGKIKA---TEVDVKNVTGAGDSFVAGLGYGYMNKMPIE 274
Query: 314 DCVRTGCYAANVVIQRSG 331
D V+ +N+ I
Sbjct: 275 DIVKFAMTMSNITISHEE 292
|
| >4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* Length = 328 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 1e-33
Identities = 59/284 (20%), Positives = 101/284 (35%), Gaps = 30/284 (10%)
Query: 60 AGGATQN-SIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPT 117
G T N + +A+ L+ SY IG D ++M+ +AAG++
Sbjct: 49 FAGDTFNTAWYLAR--LRPESRISYFSAIGDDALSQQMRAAMSAAGIDGGGLRVIPGRTV 106
Query: 118 GTCAVCVVGGERSLV--ANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESI 175
G + + GERS SAA + + +A Y +G L + +
Sbjct: 107 GLYLITLEQGERSFAYWRGQSAARELAGDADALAAA---MARADVVYFSGITLAILDQCG 163
Query: 176 QMVAEHAAAKNK------VFMMNLSAPFI--CEFFREPQEKALPYMDYVFGNETEARTFA 227
+ A A+ + F NL E + D + + +
Sbjct: 164 RATLLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEAAW- 222
Query: 228 KVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEK 287
+ + A + ++ G R V+ G V +DG+ PV P +
Sbjct: 223 ----FGDAGPDATADRYARA----GV--RSVVVKNGPHAVHFLQDGRRGRVPVP--PVAQ 270
Query: 288 LVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSG 331
+VDT AGD+F G L ++ +P+E + A V+Q G
Sbjct: 271 VVDTTAAGDSFNAGLLDSVLAGQPLETAIAAAAALAGQVVQGKG 314
|
| >3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri} Length = 319 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 5e-33
Identities = 63/290 (21%), Positives = 112/290 (38%), Gaps = 34/290 (11%)
Query: 60 AGGATQN-SIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPT 117
GG T N S+ +A+ + Y+ +G D F ++M V+ E+
Sbjct: 28 FGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFSQQMLDAWHGENVDTSLTQRMENRLP 87
Query: 118 GTCAV-CVVGGERSLV--ANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPES 174
G + GER+ N +AA + + I + Y Y++G L + +
Sbjct: 88 GLYYIETDSTGERTFYYWRNEAAAKFWLASEQ-SAAICEELANFDYLYLSGISLAILSPT 146
Query: 175 IQMVAEHAAAKNK------VFMMNL------SAPFICEFFREPQEKALPYMDYVFGNETE 222
+ + + +F N S E ++ ++ L D F +
Sbjct: 147 SREKLLSLLRECRAKGGKVIFDNNYRPRLWASK----EETQQVYQQMLECTDIAFLTLDD 202
Query: 223 ARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLF-PVI 281
W VE++ + G + V+ +GAD +V+ G+ + P +
Sbjct: 203 EDAL-----WGQQPVEDVIARTHNA----GV--KEVVVKRGADSCLVSIAGEALVDVPAV 251
Query: 282 LLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSG 331
LPKEK++DT AGD+F G+L+ + E+ + G A+ VIQ G
Sbjct: 252 KLPKEKVIDTTAAGDSFSAGYLAVRLTGGSAENAAKRGHLTASTVIQYRG 301
|
| >3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728} Length = 306 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 7e-32
Identities = 41/262 (15%), Positives = 78/262 (29%), Gaps = 44/262 (16%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPTGTCAVCVVGGERSLVANLSA 137
+G E + G+N + + E C + G ++ + A
Sbjct: 71 IPFDLYSAVGMKTHRE-YLAMIESMGINTGHVEKFEDESGPICYIATDGKKQVSFMHQGA 129
Query: 138 ANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPF 197
+ + E V + + A + + + +
Sbjct: 130 MAAWAPQLADEYEY------------------VHFSTGPNYLDMAKSIRSKIIFDP-SQE 170
Query: 198 ICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRI 257
I ++ ++ +K N+ E R F ++ G + ++
Sbjct: 171 IHKYSKDELKKFHEISYMSIFNDHEYRVFREMTGL---SSPKVTT--------------- 212
Query: 258 TVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVR 317
++T G + DGK FP I DT GAGD+F G L + +E +
Sbjct: 213 -IVTNGERGSSLFMDGKKYDFPAI---PSS-GDTVGAGDSFRAGLYLALYNRRSIEKGMI 267
Query: 318 TGCYAANVVIQRSGCTYPPKPE 339
G A+ VI + E
Sbjct: 268 YGTIIAHHVIDDGIENFSLNME 289
|
| >3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} Length = 327 | Back alignment and structure |
|---|
Score = 119 bits (302), Expect = 2e-31
Identities = 44/261 (16%), Positives = 94/261 (36%), Gaps = 25/261 (9%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPTGTCAVCVVGGERSLVANLSA 137
+ I +G D FG + + +D+ T V + A
Sbjct: 69 KKVALISRLGADAFGNYLLDVLKGEQIITDGIQQDKERRTTIVYVSKSTRTPDWLPYREA 128
Query: 138 ANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSP--ESIQMVAEHAAAKNK--VFMMNL 193
+ + + + +++++K ++++ F L+ P ++ +A + K F
Sbjct: 129 DMYLQEDDII----FELIKRSKVFHLSTFILSRKPARDTAIKAFNYAREQGKIVCFDPCY 184
Query: 194 SAPFI--CEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKAS 251
+ E+ + D+V + +AR + D+ E + +
Sbjct: 185 RKVLWPEGDDGAGVVEEIISRADFVKPSLDDAR-HL----FGPDSPENYVKRYLEL---- 235
Query: 252 GTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKP 311
+ ++T G + V+ ++ ++ P E VD GAGDAF GF+ L+
Sbjct: 236 --GVKAVILTLGEEGVIASDGEEIIRIPAF---SEDAVDVTGAGDAFWSGFICGLLDGYT 290
Query: 312 VEDCVRTGCYAANVVIQRSGC 332
V+ ++ G A I+ G
Sbjct: 291 VKRSIKLGNGVAAFKIRGVGA 311
|
| >2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} Length = 317 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 3e-31
Identities = 57/262 (21%), Positives = 101/262 (38%), Gaps = 33/262 (12%)
Query: 79 GA-TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV-GGERS-LVANL 135
G I G D GE + + + AGV + T + + G +A++
Sbjct: 53 GFEVRIIAPRGGDVTGEVVAEAARQAGVEDTPFTFLDRRTPSYTAILERDGNLVIALADM 112
Query: 136 SAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLT---VSPESIQMVAEHA-AAKNKVFMM 191
+ LK + + + F L + +++ + A A + + +
Sbjct: 113 DLYKLFTPRRLKVRAVREAIIASD------FLLCDANLPEDTLTALGLIARACEKPLAAI 166
Query: 192 NLS-APFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKA 250
+S A + + AL +D +F NE EAR G +NV + + +
Sbjct: 167 AISPAKA-----VKLKA-ALGDIDILFMNEAEARALT---GETAENVRDWPNIL----RK 213
Query: 251 SGTHKRITVITQGADPVVVA-EDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE 309
+G V+T+GA VV K L P ++ D GAGDA G+L+ + +
Sbjct: 214 AGL--SGGVVTRGASEVVAFNGTEKAILHPP---LIREVKDVTGAGDAMASGYLAAIAEG 268
Query: 310 KPVEDCVRTGCYAANVVIQRSG 331
K + + +R G AA + +Q S
Sbjct: 269 KTIREALRQGAAAAAITVQSSF 290
|
| >4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} Length = 336 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 3e-30
Identities = 54/276 (19%), Positives = 92/276 (33%), Gaps = 33/276 (11%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPTGTCAVCVV--GGERSLV--- 132
+ +G D G + A G++ + D + TG V G + +
Sbjct: 73 LKVGWASRLGTDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHR 132
Query: 133 ANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMV---AEHAAAKNK-- 187
SAA+ + E W + A++ + G F +S ++ + A +
Sbjct: 133 KG-SAASHMGVADI--DEAW--LLSARHLHATGVFPAISATTLPAARKTMDLMRAAGRSV 187
Query: 188 VFMMNLSAPF--ICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKIS 245
F NL E R+ D+V E R E +A
Sbjct: 188 SFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFL-----TGETTPEGVARFYR 242
Query: 246 QWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQ 305
Q ++ V+ GA+ + P ++VDT GAGD F G +S
Sbjct: 243 QLGA------KLVVVKLGAEGAYFDGEAGSGRVAGF--PVAEVVDTVGAGDGFAVGVISA 294
Query: 306 LVQEKPVEDCVRTGCYAANVVIQRSGCT--YPPKPE 339
L+ V + V+ G + +Q G + P + E
Sbjct: 295 LLDGLGVPEAVKRGAWIGARAVQVLGDSEGLPTRAE 330
|
| >1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* Length = 309 | Back alignment and structure |
|---|
Score = 114 bits (289), Expect = 9e-30
Identities = 64/260 (24%), Positives = 107/260 (41%), Gaps = 31/260 (11%)
Query: 79 GA-TSYIGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPTGTCAVCVVG--GERSLVAN 134
GA ++I C G D GE +++ +++ + TG A+ V GE + +
Sbjct: 55 GANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGV-ALIFVNGEGENVIGIH 113
Query: 135 LSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLT---VSPESIQMVAEHAAAKNKVFMM 191
A ++ + A L ES+ A+ A + +
Sbjct: 114 AGANAALSPALVEA--QRERIANASA------LLMQLESPLESVMAAAKIAHQNKTIVAL 165
Query: 192 NLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKAS 251
N AP RE ++ L +D + NETEA G +N E+ A K +Q
Sbjct: 166 NP-APA-----RELPDELLALVDIITPNETEAEKLT---GIRVENDED-AAKAAQVLHEK 215
Query: 252 GTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKP 311
G R +IT G+ V + +G+ + P + + VDT AGD F G ++ L++EKP
Sbjct: 216 GI--RTVLITLGSRGVWASVNGEGQRVPG---FRVQAVDTIAAGDTFNGALITALLEEKP 270
Query: 312 VEDCVRTGCYAANVVIQRSG 331
+ + +R AA + + R G
Sbjct: 271 LPEAIRFAHAAAAIAVTRKG 290
|
| >3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} PDB: 3k9e_A Length = 330 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 2e-29
Identities = 43/266 (16%), Positives = 86/266 (32%), Gaps = 33/266 (12%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPTGTCAVCVV-GGERSLV--AN 134
I C+G D FG+ A GV+++ TG+ V G+R +
Sbjct: 52 VPCGIISCVGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNIK 111
Query: 135 LSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSP--ESIQMVAEHAAAKNK--VFM 190
+A ++H+ +I++ +++I G L ++++ A F
Sbjct: 112 NAACGKLSAQHVD----ENILKDCTHFHIMGSSLFSFHMVDAVKKAVTIVKANGGVISFD 167
Query: 191 MNLSAPFI-CEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPK 249
N+ + R+ L D +E E + E +
Sbjct: 168 PNIRKEMLDIPEMRDALHFVLELTDIYMPSEGEVLLLS-----PHSTPERAIAGFLEE-- 220
Query: 250 ASGTHKRITVITQGADPVVVAEDGK---VKLFPVILLPKEKLVDTNGAGDAFVGGFLSQL 306
+ ++ +G + V+ +PV + VD GAGD F G +++
Sbjct: 221 ----GVKEVIVKRGNQGASYYSANEQFHVESYPV------EEVDPTGAGDCFGGAWIACR 270
Query: 307 VQEKPVEDCVRTGCYAANVVIQRSGC 332
++ + + R G
Sbjct: 271 QLGFDAHRALQYANACGALAVTRRGP 296
|
| >2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Length = 296 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 2e-29
Identities = 53/290 (18%), Positives = 104/290 (35%), Gaps = 31/290 (10%)
Query: 60 AGGATQNSIKVAQWMLQIPGATSY-IGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTG 118
GGA N A + + G S + +G D+ G+E+ + + + E PTG
Sbjct: 23 IGGAPAN---FA-YHVSQFGFDSRVVSAVGNDELGDEIMEVFKEKQLKNQI-ERVDYPTG 77
Query: 119 TCAVCVV-GGERS--LVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSP--E 173
T V + G + ++ N ++ LKR + +
Sbjct: 78 TVQVTLDDEGVPCYEIKEGVAWDNIPFTDELKR-----LALNTRAVCFGSLAQRNEVSRA 132
Query: 174 SIQMVAEHAAAKNKVFMM---NLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVH 230
+I + + + NL F +E ++ + + N+ E T +++
Sbjct: 133 TINRFLDTMPDIDGQLKIFDINLRQDFYT---KEVLRESFKRCNILKINDEELVTISRMF 189
Query: 231 GWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVD 290
G+ ++++ + ++ ++T G + V G V PK + D
Sbjct: 190 GYPGIDLQDKCWILLAKYNL-----KMLILTCGINGSYVFTPGVVSFQET---PKVPVAD 241
Query: 291 TNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEF 340
T GAGD+F F + ++ K V + + + V +SG P P
Sbjct: 242 TVGAGDSFTAAFCASILNGKSVPEAHKLAVEVSAYVCTQSGAM-PELPVI 290
|
| >3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} Length = 319 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 2e-29
Identities = 52/268 (19%), Positives = 90/268 (33%), Gaps = 36/268 (13%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPTGTCAVC--VVGGERSLV--A 133
++ + +G D FGE + GV+ +Y D++ T C + L
Sbjct: 56 HNSALLSRVGNDPFGEYLLAELERLGVDNQYVATDQTFKTPV-TFCEIFPPDDFPLYFYR 114
Query: 134 NLSAANCYKSEHLKRPEI-WSIVEKAKYYYIAGFFLTVSP-ESIQMVAEHAAAKNK--VF 189
A +++ ++ V +A + + P A + +F
Sbjct: 115 EPKAP----DLNIESADVSLDDVREADILWFTLTGFSEEPSRGTHREILTTRANRRHTIF 170
Query: 190 MMNLSAPFI--CEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQW 247
++ F E + E AL + GN+ E A E +
Sbjct: 171 DLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECE-IA----VGETEPERAGRAL--- 222
Query: 248 PKASGTHKRITVITQGADPVVVA---EDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLS 304
G + ++ QG V+ E +V F V +++ GAGDAF G
Sbjct: 223 -LERGV--ELAIVKQGPKGVMAMTKDETVEVPPFFV------DVINGLGAGDAFGGALCH 273
Query: 305 QLVQEKPVEDCVRTGCYAANVVIQRSGC 332
L+ E P+E +R A +V R C
Sbjct: 274 GLLSEWPLEKVLRFANTAGALVASRLEC 301
|
| >2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* Length = 311 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 8e-29
Identities = 54/266 (20%), Positives = 97/266 (36%), Gaps = 37/266 (13%)
Query: 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPTGTCAV---CVVGGERSLV---A 133
I +G D+FG + GV+V + D SAPTG + V + +
Sbjct: 50 CGIIAKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRK 109
Query: 134 NLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAE-HAAAKNKVFMMN 192
SA + E + V+ A + +G L +S + + V + A N+ F N
Sbjct: 110 G-SAGSKLSPEDVD----EEYVKSADLVHSSGITLAISSTAKEAVYKAFEIASNRSFDTN 164
Query: 193 LSAPFI-CEFFREPQEKALP--YMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPK 249
+ E + K L ++ ++ + +++ + ++ A S + +
Sbjct: 165 IRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKII-----LGESDPDKAAKAFSDYAE 219
Query: 250 ASGTHKRITVITQGADPVVVAEDGK---VKLFPVILLPKEKLVDTNGAGDAFVGGFLSQL 306
I V+ G +V DGK + V + D GAGDA G FLS
Sbjct: 220 -------IIVMKLGPKGAIVYYDGKKYYSSGYQV------PVEDVTGAGDALGGTFLSLY 266
Query: 307 VQEKPVEDCVRTGCYAANVVIQRSGC 332
+ +E + A+ + + G
Sbjct: 267 YKGFEMEKALDYAIVASTLNVMIRGD 292
|
| >1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 Length = 298 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 1e-28
Identities = 45/291 (15%), Positives = 85/291 (29%), Gaps = 36/291 (12%)
Query: 47 YDELASKENVEYIAGGATQNSIKVAQWMLQIPGA-TSYIGCIGKDKFGEEMKKNSTAAGV 105
D E GG + + G T I ++ + GV
Sbjct: 22 KDVNVVDGKREIAYGGGVVMGAITSSLL----GVKTKVITKCTREDVSKF--SFLRDNGV 75
Query: 106 NVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAG 165
V + + + R +SAA+ + L + + +I
Sbjct: 76 EVVFLKSPRTTSIENRYGSDPDTRESFL-ISAADPFTESDLA-------FIEGEAVHINP 127
Query: 166 FFLT-VSPESIQMVAEHA---AAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNET 221
+ + I ++ +A + F+ + E +EK L Y+D +
Sbjct: 128 LWYGEFPEDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLKYLDLFKVDSR 187
Query: 222 EARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVI 281
EA T T+++ E I + ++ A V+V DG
Sbjct: 188 EAETLT-----GTNDLRESCRIIRSFGAK-------IILATHASGVIVF-DGNFYEAS-- 232
Query: 282 LLPKEKLVDTNGAGDAFVGGFL-SQLVQEKPVEDCVRTGCYAANVVIQRSG 331
L G GD FL + ++ +E + +V ++ G
Sbjct: 233 -FRSWSLEGRTGRGDTCTAAFLVGFVFKKMSIEKATKFAAAVTSVKMRHPG 282
|
| >2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} Length = 332 | Back alignment and structure |
|---|
Score = 111 bits (281), Expect = 2e-28
Identities = 51/267 (19%), Positives = 93/267 (34%), Gaps = 29/267 (10%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSTAAGVNVKY--YEDESAPTGTCAVC--VVGGERSLV-- 132
+IG I D+ G ++ GV+ + E TG A E S++
Sbjct: 59 LKAGFIGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGL-AFTEIKSPEECSILMY 117
Query: 133 ANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSP--ESIQMVAEHAAAKNK--V 188
A E + E + + ++K ++G L+ SP E++ A + V
Sbjct: 118 RQDVADLYLSPEEV--NEAY--IRRSKLLLVSGTALSKSPSREAVLKAIRLAKRNDVKVV 173
Query: 189 FMMNLSAPF--ICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQ 246
F ++ E D V G E E + +E + +
Sbjct: 174 FELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENRT--EKGDNDETIRYLFK 231
Query: 247 WPKASGTHKRITVITQGADPVVVA-EDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQ 305
+ VI G + + G+ K K++ T GAGD++ FL
Sbjct: 232 H------SPELIVIKHGVEGSFAYTKAGEAYRGYAY---KTKVLKTFGAGDSYASAFLYA 282
Query: 306 LVQEKPVEDCVRTGCYAANVVIQRSGC 332
L+ K +E ++ G +A++V+ +
Sbjct: 283 LISGKGIETALKYGSASASIVVSKHSS 309
|
| >3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} Length = 304 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 2e-28
Identities = 55/261 (21%), Positives = 101/261 (38%), Gaps = 32/261 (12%)
Query: 79 GA-TSYIGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPTGTCAVCVV--GGERSLVAN 134
A T++I IG D + + ++ A ++ Y + A TG A V G+ ++
Sbjct: 54 QADTTFITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQ-AFITVNAEGQNTIYVY 112
Query: 135 LSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLT---VSPESIQMVAEHAAAKNKVFMM 191
A E + + A + + V +I E A A ++
Sbjct: 113 GGANMTMTPEDVIN--AKDAIINADF------VVAQLEVPIPAIISAFEIAKAHGVTTVL 164
Query: 192 NLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKAS 251
N AP + + L +D + NETEA + G + N + + + +
Sbjct: 165 NP-AP-----AKALPNELLSLIDIIVPNETEAELLS---GIKVTNEQS-MKDNANYFLSI 214
Query: 252 GTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKP 311
G + +IT G A + + K +DT AGD F+G F+S+L + +
Sbjct: 215 GI--KTVLITLGKQGTYFATKNQSQHIEA---YKVNAIDTTAAGDTFIGAFVSRLNKSQD 269
Query: 312 -VEDCVRTGCYAANVVIQRSG 331
+ D + G A+++ +Q+ G
Sbjct: 270 NLADAIDFGNKASSLTVQKHG 290
|
| >1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* Length = 339 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 3e-28
Identities = 53/270 (19%), Positives = 96/270 (35%), Gaps = 37/270 (13%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPTGTCAVCVV--GGERSLV--A 133
G +IGC+G D G +++ GV+V + D + + + GERS
Sbjct: 65 GECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAV-LIVNLTADGERSFTYLV 123
Query: 134 NLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSP--ESIQMVAEHAAAKNK--VF 189
+ A + L P + +++Y + LT P E+ A +F
Sbjct: 124 HPGADTYVSPQDL--PPF----RQYEWFYFSSIGLTDRPAREACLEGARRMREAGGYVLF 177
Query: 190 MMNLSAPFI--CEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQW 247
+NL + + E ++ + E + + ++ +
Sbjct: 178 DVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLS-----GASHWQDARYYL--- 229
Query: 248 PKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLV 307
+ G T+I+ GAD ++ FP P+ +VDT GAGDAFVGG L L
Sbjct: 230 -RDLGC--DTTIISLGADGALLITAEGEFHFPA---PRVDVVDTTGAGDAFVGGLLFTLS 283
Query: 308 Q-----EKPVEDCVRTGCYAANVVIQRSGC 332
+ + + + + + G
Sbjct: 284 RANCWDHALLAEAISNANACGAMAVTAKGA 313
|
| >1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1 Length = 311 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 9e-28
Identities = 62/260 (23%), Positives = 95/260 (36%), Gaps = 42/260 (16%)
Query: 80 ATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV--GGERSLVANLSA 137
++ CIG D + + + +N G+ Y S PTG A V G+ ++ A
Sbjct: 68 GCRFVTCIGNDDYSDLLIENYEKLGITG--YIRVSLPTGR-AFIEVDKTGQNRIIIFPGA 124
Query: 138 ANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQM------VAEHAAAKNKVFMM 191
K E + + + L Q E A N + +
Sbjct: 125 NAELKKELIDWNTLSE----------SDILLL------QNEIPFETTLECAKRFNGIVIF 168
Query: 192 NLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKAS 251
+ AP + E+ Y+DY+ NE E +K E VE+ A K +
Sbjct: 169 DP-APA-----QGINEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKFLE----- 217
Query: 252 GTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKP 311
+ ++ G V++ + K FP K K VDT AGD F G F L + K
Sbjct: 218 -LGVKNVIVKLGDKGVLLVNKNEKKHFPT---FKVKAVDTTAAGDVFNGAFAVALSEGKN 273
Query: 312 VEDCVRTGCYAANVVIQRSG 331
E+ V G AA + + R G
Sbjct: 274 PEEAVIFGTAAAAISVTRLG 293
|
| >2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* Length = 313 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 1e-27
Identities = 52/276 (18%), Positives = 100/276 (36%), Gaps = 39/276 (14%)
Query: 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPTGTCAVC----VVGGERSLV--A 133
S I +G D+FG+ + + S A G++ + D + TG + + LV
Sbjct: 50 CSLIARVGNDEFGKNIIEYSRAQGIDTSHIKVDNESFTGI-YFIQRGYPIPMKSELVYYR 108
Query: 134 NLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAE-HAAAKNKVFMMN 192
SA + E + + V ++ + G L +S + + V + AK++ N
Sbjct: 109 KGSAGSRLSPEDIN----ENYVRNSRLVHSTGITLAISDNAKEAVIKAFELAKSRSLDTN 164
Query: 193 LSAPF--ICEFFREPQEKALPYMD--YVFGNETEARTFAKVHGWETDNVEEIALKISQWP 248
+ E +E L D + + + + + + +E K +
Sbjct: 165 IRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKIL-----LDVTDPDEAYRKYKEL- 218
Query: 249 KASGTHKRITVITQGADPVVVAEDGK---VKLFPVILLPKEKLVDTNGAGDAFVGGFLSQ 305
++ + G+ + +D + V + D GAGDA G F+S
Sbjct: 219 -----GVKVLLYKLGSKGAIAYKDNVKAFKDAYKV------PVEDPTGAGDAMAGTFVSL 267
Query: 306 LVQEKPVEDCVRTGCYAANVVIQRSGCT--YPPKPE 339
+Q K +E + G A+ +VI G P +
Sbjct: 268 YLQGKDIEYSLAHGIAASTLVITVRGDNELTPTLED 303
|
| >2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} Length = 343 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 5e-27
Identities = 47/259 (18%), Positives = 82/259 (31%), Gaps = 34/259 (13%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPTGTCAVCV-VGGERSLVANLS 136
G S G +G D+ G + ++ + +G++ A + + + GER +V
Sbjct: 81 GRASLWGAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVP--- 137
Query: 137 AANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLT--VSPESIQMVAEHAAAKNKVFMMNLS 194
+ L + E + L PE V A A K +++
Sbjct: 138 FYD----HRLHEKKRACTPEDIA---LFDAVLVDVRWPELALDVLTVARALGKPAILDG- 189
Query: 195 APFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTH 254
E P ++ +E A + + V+++ + A
Sbjct: 190 DVAPVETLEG----LAPAATHIVFSEPAATRLTGL-----ETVKDMLPVL----HARYPQ 236
Query: 255 KRITVITQGADPVVV--AEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPV 312
I +T G A+D V + + VDT AGD F G F + +
Sbjct: 237 TFI-AVTAGPAGCWWTEADDPTVHFQTT---MQVEAVDTLAAGDIFHGTFALAMAEGMQS 292
Query: 313 EDCVRTGCYAANVVIQRSG 331
VR AA + G
Sbjct: 293 RAAVRLSSVAAALKCTVFG 311
|
| >2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 Length = 331 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 9e-27
Identities = 65/264 (24%), Positives = 108/264 (40%), Gaps = 34/264 (12%)
Query: 79 GA-TSYIGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPTGTCAVCVV--GGERSLVAN 134
GA TS + +GKD FG + +N ++ ++ Y+ + A TGT A +V G+ +V
Sbjct: 75 GAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGT-ASIIVNNEGQNIIVIV 133
Query: 135 LSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLT---VSPESIQMVAEHAAAKNKVFMM 191
A +E L+ +++ +AK + ++P + A +
Sbjct: 134 AGANLLLNTEDLRA--AANVISRAK------VMVCQLEITPATSLEALTMARRSGVKTLF 185
Query: 192 NLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKAS 251
N AP I + + D NE+EA + + E AL + +
Sbjct: 186 NP-APAI----ADLDPQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLK----- 235
Query: 252 GTHKRITVITQGADPVVVA--EDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQL--V 307
++ +IT GA+ VV + + K P K K VDT GAGD+FVG L
Sbjct: 236 -RGCQVVIITLGAEGCVVLSQTEPEPKHIPT---EKVKAVDTTGAGDSFVGALAFYLAYY 291
Query: 308 QEKPVEDCVRTGCYAANVVIQRSG 331
+ED + + A V +Q +G
Sbjct: 292 PNLSLEDMLNRSNFIAAVSVQAAG 315
|
| >1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A Length = 309 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 6e-26
Identities = 59/268 (22%), Positives = 98/268 (36%), Gaps = 42/268 (15%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVG--GERSLV---A 133
++G +G+D+ G +++ A GV++ ++ TG + G+ +
Sbjct: 48 VKVGFVGRVGEDELGAMVEERLRAEGVDLTHFRRAPGFTGL-YLREYLPLGQGRVFYYRK 106
Query: 134 NLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMV---AEHAAAKNK--V 188
SA + +E ++ +++G +SPE+ E A +
Sbjct: 107 G-SAGSALAPGAFD----PDYLEGVRFLHLSGITPALSPEARAFSLWAMEEAKRRGVRVS 161
Query: 189 FMMNLSAPF-ICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQW 247
+N E R E+ALP +D +F +E EA VEE +S
Sbjct: 162 LDVNYRQTLWSPEEARGFLERALPGVDLLFLSEEEAELL-------FGRVEEALRALSA- 213
Query: 248 PKASGTHKRITVITQGADPVVVAEDGK---VKLFPVILLPKEKLVDTNGAGDAFVGGFLS 304
V+ +GA DG+ F V + VD GAGDAF G+L+
Sbjct: 214 --------PEVVLKRGAKGAWAFVDGRRVEGSAFAV------EAVDPVGAGDAFAAGYLA 259
Query: 305 QLVQEKPVEDCVRTGCYAANVVIQRSGC 332
V PVE+ +R V G
Sbjct: 260 GAVWGLPVEERLRLANLLGASVAASRGD 287
|
| >3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A* Length = 299 | Back alignment and structure |
|---|
Score = 103 bits (260), Expect = 7e-26
Identities = 42/260 (16%), Positives = 86/260 (33%), Gaps = 48/260 (18%)
Query: 79 GA-TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCV-VGGERSLVANLS 136
G T I G D G +++ + + + + T + G+ +++ +
Sbjct: 53 GIETRLIAATGNDSNGAWIRQQIKNEPLMLLPDGHFNQHSDTSIILNSADGDNAIITTTA 112
Query: 137 AANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLT---VSPESIQMVAEHAAAKNKVFMMNL 193
AA+ + + + + L S + + + ++A ++ + N
Sbjct: 113 AADTFSLDEMIP--HMADAVAGD------ILLQQGNFSLDKTRALFQYARSRGMTTVFNP 164
Query: 194 SAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGT 253
+P P +D NE+EA + +
Sbjct: 165 -SP-----VNPDFCHLWPLIDIAVVNESEAELL---QPYGVKTL---------------- 199
Query: 254 HKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE--KP 311
VITQGA + ++G+ + P + +DT GAGD F+ L+ + P
Sbjct: 200 -----VITQGAAGAWLVQEGQRQFCPA---VPAEALDTTGAGDTFLAVMLASALLRGVAP 251
Query: 312 VEDCVRTGCYAANVVIQRSG 331
+ AA + + R G
Sbjct: 252 DALALAHASRAAAITVSRRG 271
|
| >3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* Length = 313 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 2e-25
Identities = 54/272 (19%), Positives = 95/272 (34%), Gaps = 38/272 (13%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPTGTCAVCVVGGERSL--VANL 135
+S I +G D FGE + + + V+ + +DE TG V + G S +
Sbjct: 48 VKSSLISKVGNDPFGEYLIEELSKENVDTRGIVKDEKKHTGIVFVQLKGASPSFLLYDD- 106
Query: 136 SAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSP--ESIQMVAEHAAAKNKV-FMMN 192
A + W IVE+AK L +P E++ V + + + F +N
Sbjct: 107 VAYFNMTLNDIN----WDIVEEAKIVNFGSVILARNPSRETVMKVIKKIKGSSLIAFDVN 162
Query: 193 LSAPFIC---EFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPK 249
L E + E+++ D V +E E + +
Sbjct: 163 LRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLE-----NQGVEVKGS-------- 209
Query: 250 ASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQ- 308
+T IT G + ++ V P +DT GAGDAF+ L +++
Sbjct: 210 ------MLTAITLGPKGCRLIKNETVVDVPS---YNVNPLDTTGAGDAFMAALLVGILKL 260
Query: 309 -EKPVEDCVRTGCYAANVVIQRSGCTYPPKPE 339
+ + A + Q+ G P+ +
Sbjct: 261 KGLDLLKLGKFANLVAALSTQKRGAWSTPRKD 292
|
| >3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} Length = 313 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 4e-25
Identities = 50/256 (19%), Positives = 87/256 (33%), Gaps = 31/256 (12%)
Query: 84 IGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPTGTCAVCVVG-GERSLVANLSAANCY 141
+G +G D FG+E A ++ + E T A + + N +
Sbjct: 49 VGVVGSD-FGKEHFDLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLD-TQLNVF 106
Query: 142 KSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEF 201
P+ + + + PE V + V + F E
Sbjct: 107 AEFDPHVPQYYRDSKFV-------CLGNIDPELQLKVLDQIDDPKLVVCDTM--NFWIEG 157
Query: 202 FREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVIT 261
E +K L +D N++EAR + N+ + A I + + +I
Sbjct: 158 KPEELKKVLARVDVFIVNDSEARLLS-----GDPNLVKTARIIREM------GPKTLIIK 206
Query: 262 QGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQ-----EKPVEDCV 316
+G ++ D + P P E + D GAGD F GGF+ L + E + V
Sbjct: 207 KGEHGALLFTDNGIFAAPAF--PLESIYDPTGAGDTFAGGFIGHLARCGNTSEAEMRKAV 264
Query: 317 RTGCYAANVVIQRSGC 332
G A+ +++ G
Sbjct: 265 LYGSAMASFCVEQFGP 280
|
| >3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} PDB: 3lki_A* Length = 338 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 2e-24
Identities = 57/282 (20%), Positives = 92/282 (32%), Gaps = 48/282 (17%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPTGTCAVCVVG--GERSLV--A 133
GA ++G +G D FG+ + + AGV +A T A + GERS
Sbjct: 51 GAVQFVGMLGSDMFGDFLFDSFAEAGVVTDGIVRTSTAKTAL-AFVALDAHGERSFSFYR 109
Query: 134 NLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSP--ESIQMVAEHAAAKNKVFMM 191
+A ++ EH + A ++ +T + E A A +
Sbjct: 110 PPAADLLFRVEHF--QDAS--FSDALIFHACSNSMTDADIAEVTFEGMRRAQAAGAIVSF 165
Query: 192 --NLSAPFI--CEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQW 247
N E K L D V + E A + + ++ Q
Sbjct: 166 DLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLA---NTLAADANAVIQQLWQG 222
Query: 248 PKASGTHKRITVITQGADPVVVA---EDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLS 304
++ ++T A PV G+V F V ++ D+N AGDAFVGG L
Sbjct: 223 RA------QLLLVTDAAGPVHWYTRTAGGEVPTFRV------QVQDSNAAGDAFVGGMLY 270
Query: 305 QLVQ--------------EKPVEDCVRTGCYAANVVIQRSGC 332
Q + + +R + + R G
Sbjct: 271 TFAQQFDDAAALIDFCHDPESIVSTLRFAAAVGALAVTRQGA 312
|
| >3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A* Length = 310 | Back alignment and structure |
|---|
Score = 99.6 bits (249), Expect = 3e-24
Identities = 51/268 (19%), Positives = 78/268 (29%), Gaps = 65/268 (24%)
Query: 79 GA-TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCV-VGGERSLV---- 132
GA + G G D +++ + A V + P+GT + V E +++
Sbjct: 70 GAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPG 129
Query: 133 AN--LSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLT---VSPESIQMVAEHAAAKNK 187
AN L+ + LT + + A A + +
Sbjct: 130 ANAHLTPV----PSAVAN---------------CDVLLTQLEIPVATALAAARAAQSADA 170
Query: 188 VFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQW 247
V M+N +P + R + D V NE EA + +
Sbjct: 171 VVMVNA-SPAGQD--RSSLQDLAAIADVVIANEHEANDWPSP----PTHF---------- 213
Query: 248 PKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLV 307
VIT G V P P VDT GAGD F G +
Sbjct: 214 -----------VITLGVRGARYVGADGVFEVPA---PTVTPVDTAGAGDVFAGVLAANWP 259
Query: 308 Q----EKPVEDCVRTGCYAANVVIQRSG 331
+ +R C A + SG
Sbjct: 260 RNPGSPAERLRALRRACAAGALATLVSG 287
|
| >3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} Length = 346 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 1e-19
Identities = 51/325 (15%), Positives = 96/325 (29%), Gaps = 48/325 (14%)
Query: 45 PMYDELASKENVEYIAGGATQN-SIKVAQWMLQIPGA-TSYIGCIGKDKFGEEMKKNSTA 102
P Y L E + G N +A + T+ I + ++ GE K
Sbjct: 18 PEYLMLEQTEQLRMNFVGTGVNLLANLAHF-----QLETALITKLPANRLGEAGKAALRK 72
Query: 103 AGVNVKYYEDESAPTGTCAVCV-VGGERSLVANL----SAANCYKSEHLKRPEIWSIVEK 157
G++ ++ ++ G+ + G + V SA +++ + +
Sbjct: 73 LGISDQWVGEKGDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYDFEAF---LAE 129
Query: 158 AKYYYIAGFFLTVSPESIQMVAE--HAAAKNKV---FMMNL--------SAPFICEFFRE 204
+I G L+++ ++ A + F N SA F+ + +
Sbjct: 130 VDMVHICGISLSLTEKTRDAALILAQKAHAYQKKVCFDFNYRPSLNTANSALFMRQQYER 189
Query: 205 PQEKALPYMDYVFGNETEARTFAKVHGWE----TDNVEEIALKISQWP--KASGTHKRIT 258
LPY D VFG+ + E E+ + + R
Sbjct: 190 ----ILPYCDIVFGSRRDLVELLGFIPREDLEGEAQETELIQRFMSQYNLEWFAGTTRSH 245
Query: 259 VITQGADPVVVAEDGK---VKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDC 315
Q + + + P+ +D GAGDA+ G L Q +E
Sbjct: 246 SQNQNYLSGYLYTQNEYQQSEKRPL------LNLDRIGAGDAYAAGILYGYSQNWSLEKA 299
Query: 316 VRTGCYAANVVIQRSGCT-YPPKPE 339
V + G +
Sbjct: 300 VTFATVNGVLAHTIQGDIPLTTVKQ 324
|
| >2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 Length = 351 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 8e-19
Identities = 52/320 (16%), Positives = 104/320 (32%), Gaps = 36/320 (11%)
Query: 45 PMYDELASKENVEYIAGGATQN-SIKVAQWMLQIPGA-TSYIGCIGKDKFGEEMKKNSTA 102
P + + ++ + GGA N + +AQ G ++ + + G+ +
Sbjct: 28 PDHKRIFQTDSFDVTYGGAEANVAAFLAQM-----GLDAYFVTKLPNNPLGDAAAGHLRK 82
Query: 103 AGVNVKYYEDESAPTGTCAV-CVVGGERSLVA---NLSAANCYKSEHLKRPEIWSIVEKA 158
GV Y G + S V SA + K E +I ++ A
Sbjct: 83 FGVKTDYIARGGNRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFDWEKI---LDGA 139
Query: 159 KYYYIAGFFLTVSPESIQMV---AEHAAAKNK--VFMMNLSAPFI-CEFFREPQEKALPY 212
++++ +G + E ++ + A K +N A E ++ + Y
Sbjct: 140 RWFHFSGITPPLGKELPLILEDALKVANEKGVTVSCDLNYRARLWTKEEAQKVMIPFMEY 199
Query: 213 MDYVFGNETEARTFAKVHGWETD---------NVEEIALKISQWPKASG---THKRITVI 260
+D + NE + + D +IA ++++ T +
Sbjct: 200 VDVLIANEEDIEKVLGISVEGLDLKTGKLNREAYAKIAEEVTRKYNFKTVGITLRESISA 259
Query: 261 TQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGC 320
T V+V E+G+ + +VD GAGD+F G + + +
Sbjct: 260 TVNYWSVMVFENGQPHFSNR---YEIHIVDRVGAGDSFAGALIYGSLMGFDSQKKAEFAA 316
Query: 321 YAANVVIQRSG-CTYPPKPE 339
A+ + G E
Sbjct: 317 AASCLKHTIPGDFVVLSIEE 336
|
| >3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A* Length = 309 | Back alignment and structure |
|---|
Score = 51.0 bits (123), Expect = 2e-07
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 12/110 (10%)
Query: 219 NETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGAD-PVVVAEDGKVKL 277
N+ E + D+V + A +I SG KR+ V++ G + V + +++
Sbjct: 187 NQKELSALVNRELTQPDDVRKAAQEI----VNSGKAKRV-VVSLGPQGALGVDSENCIQV 241
Query: 278 FPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTG--CYAANV 325
P P K T GAGD+ VG +L + +E+ VR G +A
Sbjct: 242 VP----PPVKSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGSAAT 287
|
| >2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A* Length = 330 | Back alignment and structure |
|---|
Score = 51.0 bits (123), Expect = 2e-07
Identities = 11/70 (15%), Positives = 26/70 (37%), Gaps = 7/70 (10%)
Query: 259 VITQGAD-PVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVR 317
+++ GA ++ P +++ G+GD+ V G S ++ + D ++
Sbjct: 240 IVSLGAQGAFAKHNHTFYRVNI----PTISVLNPVGSGDSTVAGITSAILNHENDHDLLK 295
Query: 318 TG--CYAANV 325
N
Sbjct: 296 KANTLGMLNA 305
|
| >2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A* Length = 323 | Back alignment and structure |
|---|
Score = 51.0 bits (123), Expect = 2e-07
Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 7/70 (10%)
Query: 259 VITQGAD-PVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVR 317
VI+ G D + D ++ P + + G+GDA + G L ++ P + ++
Sbjct: 223 VISLGKDGAIAKHHDQFYRVKI----PTIQAKNPVGSGDATIAGLAYGLAKDAPAAELLK 278
Query: 318 TG--CYAANV 325
G AN
Sbjct: 279 WGMAAGMANA 288
|
| >2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1 Length = 306 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 2e-07
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 259 VITQGAD-PVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVR 317
+++ D + + +G + P ++ ++ GAGD+ V GFL+ L + K +ED V
Sbjct: 215 LVSFAGDGALFASAEGMFHVNV----PSGEVRNSVGAGDSVVAGFLAALQEGKSLEDAVP 270
Query: 318 TG--CYAANV 325
+A
Sbjct: 271 FAVAAGSATA 280
|
| >2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus} Length = 306 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 3e-07
Identities = 15/70 (21%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 259 VITQGAD-PVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVR 317
+++ G D + + ++ +K P+ K+V+T G+GD+ V G ++ + +E +
Sbjct: 215 IVSLGGDGAIYIDKEISIKAVN----PQGKVVNTVGSGDSTVAGMVAGIASGLSIEKAFQ 270
Query: 318 TG--CYAANV 325
C A
Sbjct: 271 QAVACGTATA 280
|
| >3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A Length = 320 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 3e-07
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 259 VITQGAD-PVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVR 317
V++ GA + ++ P PK + + GAGD FVG F++ L P+ + ++
Sbjct: 219 VVSLGAKGSICAHNGKLYQVIP----PKVQERNDTGAGDVFVGAFIAGLAMNMPITETLK 274
Query: 318 TG--CYAANV 325
C A+ V
Sbjct: 275 VATGCSASKV 284
|
| >2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1 Length = 331 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 3e-06
Identities = 12/71 (16%), Positives = 24/71 (33%), Gaps = 7/71 (9%)
Query: 259 VITQGAD-PVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE-KPVEDCV 316
V++ +V +G + + GAGDA+V G + ++ +
Sbjct: 238 VVSYEVKNDIVATREGVWLIRSK---EEIDTSHLLGAGDAYVAGMVYYFIKHGANFLEMA 294
Query: 317 RTG--CYAANV 325
+ G A
Sbjct: 295 KFGFASALAAT 305
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 8e-05
Identities = 67/400 (16%), Positives = 128/400 (32%), Gaps = 115/400 (28%)
Query: 4 EGILL-GM---GNPLLDISAVVDEEFLKKYD-----IKLNNAILAEDKHLPMYDELASKE 54
+ +L+ G+ G + + + + K D + L N E L M +L +
Sbjct: 151 KNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETV-LEMLQKLLYQI 209
Query: 55 NVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGV--NVKYYED 112
+ + + ++IK L+I + + + + +N V NV+ +
Sbjct: 210 DPNWTSRSDHSSNIK-----LRIHSIQAEL----RRLLKSKPYENCLL--VLLNVQNAKA 258
Query: 113 ESAPTGTCAVCVVGGERSLVANLSAANCYK--SEH----LKRPEIWSIVEKAKYYYIAGF 166
+A +C + + + + LSAA +H L E+ S++ KY
Sbjct: 259 WNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL--LKYLDCRPQ 316
Query: 167 FL-----TVSPESIQMVAE-----HAAAKN--KVFMMNLSAPFICEFFR--EPQE-KALP 211
L T +P + ++AE A N V L+ I EP E + +
Sbjct: 317 DLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTT-IIESSLNVLEPAEYRKM- 374
Query: 212 YMDY-VFGNET--EARTFAKVHGW---ETDNVEEIALK------ISQWPKASGT------ 253
+ VF + + W +V + K + + PK T
Sbjct: 375 FDRLSVFPPSAHIPTILLSLI--WFDVIKSDVMVVVNKLHKYSLVEKQPK-ESTISIPSI 431
Query: 254 --------------HKRITVITQ--------GADPVVVAEDG-----------------K 274
H+ I + D + D +
Sbjct: 432 YLELKVKLENEYALHRSI--VDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPER 489
Query: 275 VKLFPVILLP----KEKLVDTNGAGDAFVGGFLSQLVQEK 310
+ LF ++ L ++K+ + A +A G L+ L Q K
Sbjct: 490 MTLFRMVFLDFRFLEQKIRHDSTAWNA-SGSILNTLQQLK 528
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.1 bits (98), Expect = 2e-04
Identities = 48/334 (14%), Positives = 99/334 (29%), Gaps = 64/334 (19%)
Query: 16 DISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAG-GATQNSIKVAQWM 74
DI +V ++ F+ +D K +D M + SKE +++I + W
Sbjct: 20 DILSVFEDAFVDNFDCK-----DVQD----MPKSILSKEEIDHIIMSKDAVSGTLRLFWT 70
Query: 75 LQIPGATSY---IGCIGKDKFG---EEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGE 128
L + + + + +K + + Y ++ +
Sbjct: 71 LLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYN------DNQ 124
Query: 129 RSLVANLSAANCYKS--EHLK--RPEIWSIVEKAKYYYIAGF---FLTVSPESIQMVAEH 181
N+S Y + L RP ++ + G ++ + +
Sbjct: 125 VFAKYNVSRLQPYLKLRQALLELRPAKNVLI-----DGVLGSGKTWVAL--DVCLSYKVQ 177
Query: 182 AAAKNKVFMMNLSAPFICEFFREPQEKALPYMD--YVFGNETEARTFAKVHGWET----- 234
K+F +NL E E +K L +D + ++ + ++H +
Sbjct: 178 CKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL 237
Query: 235 -------------DNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVI 281
NV+ K W A +I + T+ V + I
Sbjct: 238 LKSKPYENCLLVLLNVQN--AKA--W-NAFNLSCKILLTTRFKQ---VTDFLSAATTTHI 289
Query: 282 LLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDC 315
L + T + + +L Q+ P E
Sbjct: 290 SLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVL 323
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 341 | |||
| 3otx_A | 347 | Adenosine kinase, putative; AP5A, transferase-tran | 100.0 | |
| 3loo_A | 365 | Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad | 100.0 | |
| 3vas_A | 370 | Putative adenosine kinase; ribokinase, enzyme, tra | 100.0 | |
| 3uq6_A | 372 | Adenosine kinase, putative; ribokinase, transferas | 100.0 | |
| 1bx4_A | 345 | Protein (adenosine kinase); human adenosine kinase | 100.0 | |
| 2abs_A | 383 | Adenosine kinase, AK; ribokinase fold, alpha/beta, | 100.0 | |
| 4e3a_A | 352 | Sugar kinase protein; structural genomics, protein | 100.0 | |
| 3ry7_A | 304 | Ribokinase; transferase; 2.15A {Staphylococcus aur | 100.0 | |
| 1rkd_A | 309 | Ribokinase; carbohydrate kinase, ribose, nucleotid | 100.0 | |
| 2fv7_A | 331 | Ribokinase; structural genomics, structural genomi | 100.0 | |
| 4du5_A | 336 | PFKB; structural genomics, PSI-biology, NEW YORK s | 100.0 | |
| 3ljs_A | 338 | Fructokinase; fructokianse, PSI2, NYSGXRC, structu | 100.0 | |
| 3ikh_A | 299 | Carbohydrate kinase; transferase,kinase,SAD,ribose | 100.0 | |
| 3lhx_A | 319 | Ketodeoxygluconokinase; structural genomics, PSI-2 | 100.0 | |
| 3go6_A | 310 | Ribokinase RBSK; phosphofructokinase, carbohydrate | 100.0 | |
| 2rbc_A | 343 | Sugar kinase, AGR_C_4560P; ribokinase family, ATP- | 100.0 | |
| 3kzh_A | 328 | Probable sugar kinase; NYSGXRC, PSI-II, protein st | 100.0 | |
| 3iq0_A | 330 | Putative ribokinase II; transferase,kinase,SAD,rib | 100.0 | |
| 3h49_A | 325 | Ribokinase; transferase,PFKB family,sugar kinase Y | 100.0 | |
| 3hj6_A | 327 | Fructokinase, FRK; fructose, transferase, carbohyd | 100.0 | |
| 3ktn_A | 346 | Carbohydrate kinase, PFKB family; PFKB family,ribo | 100.0 | |
| 3pl2_A | 319 | Sugar kinase, ribokinase family; PFKB PFAM motif, | 100.0 | |
| 4e69_A | 328 | 2-dehydro-3-deoxygluconokinase; putative sugar kin | 100.0 | |
| 2c4e_A | 302 | Sugar kinase MJ0406; transferase, nucleoside kinas | 100.0 | |
| 2nwh_A | 317 | AGR_C_3442P, carbohydrate kinase; structural genom | 100.0 | |
| 1vm7_A | 311 | Ribokinase; TM0960, structural genomics, JCSG, pro | 100.0 | |
| 3umo_A | 309 | 6-phosphofructokinase isozyme 2; glycolysis, trans | 100.0 | |
| 2qcv_A | 332 | Putative 5-dehydro-2-deoxygluconokinase; structura | 100.0 | |
| 3ie7_A | 320 | LIN2199 protein; phosphofructokinases, transferase | 100.0 | |
| 2jg1_A | 330 | Tagatose-6-phosphate kinase; phosphoryl transfer, | 100.0 | |
| 2f02_A | 323 | Tagatose-6-phosphate kinase; LACC, structural geno | 100.0 | |
| 2v78_A | 313 | Fructokinase; transferase, PFKB family carbohydrat | 100.0 | |
| 2dcn_A | 311 | Hypothetical fructokinase; 2-keto-3-deoxygluconate | 100.0 | |
| 3cqd_A | 309 | 6-phosphofructokinase isozyme 2; phosphofructokina | 100.0 | |
| 1v1a_A | 309 | 2-keto-3-deoxygluconate kinase; ATP, structural ge | 100.0 | |
| 1tyy_A | 339 | Putative sugar kinase; ribokinase fold, alpha/beta | 100.0 | |
| 4e84_A | 352 | D-beta-D-heptose 7-phosphate kinase; LPS-heptose b | 100.0 | |
| 4gm6_A | 351 | PFKB family carbohydrate kinase; enzyme function i | 100.0 | |
| 2hlz_A | 312 | Ketohexokinase; non-protein kinase, creatine kinas | 100.0 | |
| 3ewm_A | 313 | Uncharacterized sugar kinase PH1459; carbohydrate | 100.0 | |
| 2ajr_A | 331 | Sugar kinase, PFKB family; TM0828, possible 1-phos | 100.0 | |
| 3b1n_A | 326 | Ribokinase, putative; rossmann fold, ATP binding, | 100.0 | |
| 2pkf_A | 334 | Adenosine kinase; transferase, S genomics, TB stru | 100.0 | |
| 2abq_A | 306 | Fructose 1-phosphate kinase; dimer, structural gen | 100.0 | |
| 2jg5_A | 306 | Fructose 1-phosphate kinase; 1-phosphofructokinase | 100.0 | |
| 3kd6_A | 313 | Carbohydrate kinase, PFKB family; nucleoside kinas | 100.0 | |
| 2qhp_A | 296 | Fructokinase; NP_810670.1, PFKB family carbohydrat | 100.0 | |
| 3bf5_A | 306 | Ribokinase related protein; 10640157, putative rib | 100.0 | |
| 2afb_A | 351 | 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro- | 100.0 | |
| 1vk4_A | 298 | PFKB carbohydrate kinase TM0415; structural genomi | 100.0 | |
| 2yxt_A | 312 | Pyridoxal kinase; beta sheet with alpha helix, met | 99.92 | |
| 2ddm_A | 283 | Pyridoxine kinase; pyridoxal kinase, ribokinase, p | 99.91 | |
| 1jxh_A | 288 | Phosphomethylpyrimidine kinase; THID, ribokinase f | 99.89 | |
| 1ub0_A | 258 | THID, phosphomethylpyrimidine kinase; thiamin bios | 99.85 | |
| 2i5b_A | 271 | Phosphomethylpyrimidine kinase; ADP complex, PDXK, | 99.82 | |
| 3pzs_A | 289 | PM kinase, pyridoxamine kinase; structural genomic | 99.81 | |
| 3h74_A | 282 | Pyridoxal kinase; PSI-II, structural genomics, pro | 99.8 | |
| 3mbh_A | 291 | Putative phosphomethylpyrimidine kinase; structura | 99.77 | |
| 3zs7_A | 300 | Pyridoxal kinase; transferase, sleeping sickness; | 99.76 | |
| 1ekq_A | 272 | Hydroxyethylthiazole kinase; alpha-beta, transfera | 99.66 | |
| 3rm5_A | 550 | Hydroxymethylpyrimidine/phosphomethylpyrimidine K | 99.57 | |
| 1v8a_A | 265 | Hydroxyethylthiazole kinase; alpha-beta, ATP bindi | 99.3 | |
| 2r3b_A | 310 | YJEF-related protein; putative kinase in the ribok | 99.05 | |
| 3bgk_A | 311 | SMU.573, putative uncharacterized protein; alpha/b | 99.05 | |
| 3dzv_A | 273 | 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_ | 98.91 | |
| 3rss_A | 502 | Putative uncharacterized protein; unknown function | 98.84 | |
| 3drw_A | 474 | ADP-specific phosphofructokinase; AMP, GLYC kinase | 98.83 | |
| 3rpz_A | 279 | ADP/ATP-dependent NAD(P)H-hydrate dehydratase; str | 98.72 | |
| 1ua4_A | 455 | Glucokinase, ADP-dependent glucokinase; transferas | 98.46 | |
| 3nl6_A | 540 | Thiamine biosynthetic bifunctional enzyme; thiamin | 98.44 | |
| 3hpd_A | 265 | Hydroxyethylthiazole kinase; alpha-beta, ATP bindi | 98.41 | |
| 1gc5_A | 467 | ADP-dependent glucokinase; ALFA/beta sandwichs, in | 98.28 | |
| 1l2l_A | 457 | ADP-dependent glucokinase; ADP glucokinase APO, tr | 98.24 | |
| 3k5w_A | 475 | Carbohydrate kinase; 11206B,helicobacter pylori,PS | 97.49 |
| >3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-57 Score=416.87 Aligned_cols=340 Identities=39% Similarity=0.713 Sum_probs=302.4
Q ss_pred CCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCC-CCc
Q 019402 2 AYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQI-PGA 80 (341)
Q Consensus 2 ~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~l-g~~ 80 (341)
++..+|+++|++++|++..++++|+++|++.+|..++.+++++|.+++.....+....+||++.|+|.++++|+++ |.+
T Consensus 5 ~~~~~v~~iG~~~lD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~~~~~~~~~~~~~GG~~~N~a~~la~L~~~~G~~ 84 (347)
T 3otx_A 5 SAPLRVYVQCNPLLDVSAHVSDEFLVKYGLERGTAILLSERQKGIFDDIEKMPNVRYVPGGSGLNVARVAQWMQQAYKGK 84 (347)
T ss_dssp -CCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGTTHHHHHHTSTTCEEEECCHHHHHHHHHHHTTGGGTTS
T ss_pred cCCCcEEEECCceeeEEEecCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEecCCHHHHHHHHHHHhcccCCCC
Confidence 3456899999999999999999999999999999999999999999999999999999999999999999983221 588
Q ss_pred -eEEEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCCchhHhhhhcce
Q 019402 81 -TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAK 159 (341)
Q Consensus 81 -v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (341)
+.++|.+|+|.+|+.+++.|++.||++++++..+.+|+.+++.+++|+|+++.+.+++..++++++...+.++.+++++
T Consensus 85 ~~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~T~~~~i~~~~g~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~ 164 (347)
T 3otx_A 85 FVTYVGCIADDRYGKVLKEAAEHEGIVMAVEHTTKAGSGACAVCITGKERTLVADLGAANHLSSEHMRSPAVVRAMDESR 164 (347)
T ss_dssp SEEEECEECSSHHHHHHHHHHHHHTCEECCEECSSSCEEEEEEEEETTEEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCS
T ss_pred eEEEEEEecCChHHHHHHHHHHHCCCceecccCCCCCCeEEEEEEECCceeeeechhhhhcCCHHHcCchhhHHHHhhCC
Confidence 9999999999999999999999999999987677789999988888999988888888889998887644457889999
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHH
Q 019402 160 YYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEE 239 (341)
Q Consensus 160 ~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~ 239 (341)
++|++|+.+..+++.+.++++.++++++++++|++.+.+...+++.+.++++++|++++|++|++.|++..+.+.++.++
T Consensus 165 ~~~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~~~dil~~N~~Ea~~l~~~~~~~~~~~~~ 244 (347)
T 3otx_A 165 IFYFSGFTLTVDVNHVLQACRKAREVDGLFMINLSAPFIMQFFSAQLGEVLPYTDIIVANRHEAKEFANMMKWDTDCVEE 244 (347)
T ss_dssp EEEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHHTCCCCCHHH
T ss_pred EEEEeeeecccCHHHHHHHHHHHHHhCCEEEeeCchhhhHHHHHHHHHHHHhhCCEEecCHHHHHHHhcccCCCcCCHHH
Confidence 99999988778889999999999999999999999888777677888999999999999999999999877776788999
Q ss_pred HHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHH
Q 019402 240 IALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTG 319 (341)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A 319 (341)
+++.+.++++....+++.||||+|++|++++++++.+++|+++++..+++|||||||+|+|||+++|++|+++++|+++|
T Consensus 245 ~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~l~~a~~~a 324 (347)
T 3otx_A 245 IARRAVSEVPYTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMGGFLSAYAVGKDLRRCCETG 324 (347)
T ss_dssp HHHHHHHTSCCCCSSCCEEEEEETTEEEEEEETTEEEEECCCCCCGGGCCSSCCSHHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred HHHHHHhhhccccCCCCEEEEEeCCCCeEEEECCeEEEEEecccCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 99999654321146889999999999999999998889988776555899999999999999999999999999999999
Q ss_pred HHHHhhhhhhccccCCCCCCCC
Q 019402 320 CYAANVVIQRSGCTYPPKPEFN 341 (341)
Q Consensus 320 ~~~aa~~v~~~g~~~p~~~e~~ 341 (341)
+++|+.+|++.|+++|..++++
T Consensus 325 ~~~aa~~v~~~G~~~p~~~~~~ 346 (347)
T 3otx_A 325 HYTAQEVIQRDGCSFPEKPSFS 346 (347)
T ss_dssp HHHHHHHHTCC----CCSCSCC
T ss_pred HHHHHHHHcccCCCCCCCCCCC
Confidence 9999999999999999998875
|
| >3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-58 Score=421.09 Aligned_cols=338 Identities=51% Similarity=0.907 Sum_probs=299.7
Q ss_pred cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEE
Q 019402 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~l 83 (341)
+.+|+++|++++|++..++++|+++|++.+|.+++.+..++|.+++.....+....+||++.|+|+++++|.++|.++.+
T Consensus 23 ~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~e~~~~~~~~~~~GG~~~N~a~~~~~L~~lG~~~~~ 102 (365)
T 3loo_A 23 DGMLVGLGNPLLDISAVVEKDLLNKYDMQPNNAILAEEKHMPMYQELIEKYQAEYIAGGSVQNSLRVAQWILQRPRTAIF 102 (365)
T ss_dssp TTSEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGTHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHTCTTSEEE
T ss_pred CccEEEECCCeEeEEEecCHHHHHHcCCCCCCceechhHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhhcCCCcEEE
Confidence 34799999999999999999999999999999999999999999999998899999999999999999986666899999
Q ss_pred EEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCCchhHhhhhcceEEEE
Q 019402 84 IGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYI 163 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i 163 (341)
+|.+|+|.+|+.+++.|++.||++++++..+.+|+.+++++++++|+++.+++++..++++++.....++.+.++|++|+
T Consensus 103 ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~Tg~~~i~~~~~~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~v~i 182 (365)
T 3loo_A 103 FGCVGQDEYARILEERATSNGVNVQYQRSATSPTGTCAVLVTGTQRSLCANLAAANDFTPEHLRSDGNRAYLQGAQFFYV 182 (365)
T ss_dssp EEEEESBHHHHHHHHHHHHHTCEEEEEEESSSCCEEEEEEEETTEEEEEEECGGGGGCCGGGGGSHHHHHHHHHCSEEEE
T ss_pred EEEecCCchHHHHHHHHHHCCCceeccccCCCCCeEEEEEEECCceEEEeccchHhhCCHhHcCchhhHHHHhhCCEEEE
Confidence 99999999999999999999999999866777899999988888898888889888999988875445567899999999
Q ss_pred eccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHHH
Q 019402 164 AGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALK 243 (341)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~ 243 (341)
+|+.+..+++.+.++++.++++|+++++|++.+.+....++.+.++++++|++++|++|++.+++....+.++++++++.
T Consensus 183 ~G~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~ 262 (365)
T 3loo_A 183 SGFFFTVSFESALSVAKEAAATGRMFMMNLSAPFVPQFYKNNLEEIFPYVDVLFGNETEAIALAKEFNYGTEDLREIGKR 262 (365)
T ss_dssp EGGGHHHHHHHHHHHHHHHHHTTCEEEEECCSTHHHHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCCCHHHHHHH
T ss_pred eeeeccCCHHHHHHHHHHHHHcCCEEEEECCchhhhHHHHHHHHHHHHhCCEEecCHHHHHHHhcccCCCCCCHHHHHHH
Confidence 99887677889999999999999999999998887777778889999999999999999999999877777899999999
Q ss_pred HhcCCCCCCCCccEEEEeeCCCCEEEE--eCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHH
Q 019402 244 ISQWPKASGTHKRITVITQGADPVVVA--EDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCY 321 (341)
Q Consensus 244 l~~~~~~~~~~~~~vvvt~G~~G~~~~--~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~ 321 (341)
+.++.+....+++.||||+|++|++++ ++++.+++|+++++..+++|||||||+|+|||+++|++|+++++|+++|++
T Consensus 263 l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~agfl~~l~~g~~l~~a~~~a~~ 342 (365)
T 3loo_A 263 IAALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFVGGFLAQLLQSRTVDVCIKCGIW 342 (365)
T ss_dssp HHTSCCSSTTSCCEEEEEETTEEEEEEETTCSCCEEECCCCCC------CTTHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHhhhhhccCCCCEEEEEeCCCCEEEEEecCCeEEEEeccccCCCCccCCCChHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 965322122478999999999999999 778888888877644589999999999999999999999999999999999
Q ss_pred HHhhhhhhccccCCCCCCCC
Q 019402 322 AANVVIQRSGCTYPPKPEFN 341 (341)
Q Consensus 322 ~aa~~v~~~g~~~p~~~e~~ 341 (341)
+|+.+|++.|+.+|..++|+
T Consensus 343 ~Aa~~v~~~G~~~p~~~~~~ 362 (365)
T 3loo_A 343 AAREIIQRSGCTFEGEPSFC 362 (365)
T ss_dssp HHHHHHHHGGGGGGSCCCC-
T ss_pred HHHHHHcCCCCCCCCCccCC
Confidence 99999999999999999875
|
| >3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-57 Score=420.70 Aligned_cols=338 Identities=39% Similarity=0.705 Sum_probs=304.6
Q ss_pred cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEE
Q 019402 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~l 83 (341)
+.+|+++|++++|++..++++|+++|++.+|...+.+.+++|.+++.....+....+||++.|+|.++++|++.|.++.+
T Consensus 24 ~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~P~~ge~~~~~~~~~~~GG~~~N~A~~la~L~~~G~~~~~ 103 (370)
T 3vas_A 24 EGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCSY 103 (370)
T ss_dssp TTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTHHHHHHTTSSSCEEEEECHHHHHHHHHHHHHCCTTCEEE
T ss_pred CccEEEECCcceeEEEecCHHHHHHcCCCCCceEEccHHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhcCCCCcEEE
Confidence 56999999999999999999999999999999999999999999999999999999999999999999995444699999
Q ss_pred EEeecCCchhHHHHHHHHhcCCceeEeec-CCCCcceEEEEEeCCeeceeecccccccCCcccCCCchhHhhhhcceEEE
Q 019402 84 IGCIGKDKFGEEMKKNSTAAGVNVKYYED-ESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYY 162 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~~-~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 162 (341)
+|.+|+|.+|+.+++.|++.||++++++. .+.+|+.+++++++|+|+++.+.+++..++++++.....++.+.++|++|
T Consensus 104 ig~vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~~g~rt~~~~~ga~~~l~~~~~~~~~~~~~~~~~~~v~ 183 (370)
T 3vas_A 104 VGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVSEKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQVYY 183 (370)
T ss_dssp EEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEECSSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSEEE
T ss_pred EEEEcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEeCCceeEEEccchhhhCCHHHcCchhhHHHHhhCCEEE
Confidence 99999999999999999999999999875 67789999999888899988888888899998887644456789999999
Q ss_pred EeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHH
Q 019402 163 IAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIAL 242 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~ 242 (341)
++|+.+.++++.+..+++.+++.|+++++|++.+.|....++.+.++++++|++++|++|++.|++....+.++++++++
T Consensus 184 ~~g~~~~~~~~~~~~~~~~a~~~g~~v~ld~~~~~~~~~~~~~l~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~ 263 (370)
T 3vas_A 184 IAGFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTVHATAR 263 (370)
T ss_dssp EEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSSHHHHHHH
T ss_pred EEeeeccCCHHHHHHHHHHHHHcCCEEEEECCcHHHHHHHHHHHHHHHhhCCEEEcCHHHHHHHhcccCCCccCHHHHHH
Confidence 99988777788999999999999999999999888777677788999999999999999999999987666678899999
Q ss_pred HHhcCCCCCCC-CccEEEEeeCCCCEEEEe--CCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHH
Q 019402 243 KISQWPKASGT-HKRITVITQGADPVVVAE--DGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTG 319 (341)
Q Consensus 243 ~l~~~~~~~~~-~~~~vvvt~G~~G~~~~~--~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A 319 (341)
.|.++++.... +++.||||+|++|+++++ +++.+++|+++++..+++|||||||+|+|||+++|++|+++++|+++|
T Consensus 264 ~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag~l~~l~~g~~l~~a~~~A 343 (370)
T 3vas_A 264 YIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKPMITSLHAA 343 (370)
T ss_dssp HHHHSCCTTCCCCCCEEEEEETTEEEEEEETTCSSCEEECCCCCCTTTCSCCTTHHHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred HHHhhcccccccCCCEEEEecCCCceEEEEcCCCeEEEEecccccCCCcCCCCChHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 98543211113 789999999999999998 888889998876555899999999999999999999999999999999
Q ss_pred HHHHhhhhhhccccCCCCCCCC
Q 019402 320 CYAANVVIQRSGCTYPPKPEFN 341 (341)
Q Consensus 320 ~~~aa~~v~~~g~~~p~~~e~~ 341 (341)
+++|+.+|++.|+.+|..++++
T Consensus 344 ~aaAa~~v~~~G~~~p~~~~~~ 365 (370)
T 3vas_A 344 VKAAAYIICRSGFSLGSRDSYS 365 (370)
T ss_dssp HHHHHHHHTSSSSCCCCGGGGC
T ss_pred HHHHHHHHcccCCcCCCCccce
Confidence 9999999999999999998875
|
| >3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-56 Score=408.57 Aligned_cols=337 Identities=38% Similarity=0.692 Sum_probs=299.0
Q ss_pred ceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEE
Q 019402 5 GILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li 84 (341)
..|++||++++|++..+|++||++++|.+|.+++.++++.|..++..........+||++.|+|+++++|.+.+..+.|+
T Consensus 27 ~~v~giGnalvDi~~~v~d~~l~~~~l~kg~m~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a~~la~LG~~~~~~~fi 106 (372)
T 3uq6_A 27 GYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCSYV 106 (372)
T ss_dssp TCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTTHHHHHHTSSSCEEEECCHHHHHHHHHHHHHCSTTSEEEE
T ss_pred CeEEEECCceeeEEEEeCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEeCCcHHHHHHHHHHHcCCCCCcEEEE
Confidence 35999999999999999999999999999999999999999999999999999999999999999999965445669999
Q ss_pred EeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEeCCeeceeecccccccCCcccCCCchhHhhhhcceEEEE
Q 019402 85 GCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYI 163 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i 163 (341)
|.||+|.+|+++++.|++.||+++++. ..+.+|+.++++.++|+|+++.+.+++..+++++++.+..+..++.++++|+
T Consensus 107 G~VG~D~~G~~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~~dgert~~~~~ga~~~l~~~~i~~~~~~~~i~~a~~~~~ 186 (372)
T 3uq6_A 107 GCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVSEKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQVYYI 186 (372)
T ss_dssp EEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEECSSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSEEEE
T ss_pred eeecCCHHHHHHHHHHHHcCCCceeeeecCCCCceEEEEEcCCCceEEEEeccchhhcchhhhhhhhHHHHhhcccEEEE
Confidence 999999999999999999999999875 4566788888888899999999999999999999987666778999999999
Q ss_pred eccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHHH
Q 019402 164 AGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALK 243 (341)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~ 243 (341)
+++.+..+++.+.++++.++++++++.+|++.+.+....++.+.++++++|++++|++|++.|++......++.+++++.
T Consensus 187 ~g~~~~~~~~~~~~~~~~a~~~g~~v~ldls~~~~~~~~~~~l~~ll~~~Dil~~Ne~Ea~~l~~~~~~~~~~~~~~a~~ 266 (372)
T 3uq6_A 187 AGFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTVHATARY 266 (372)
T ss_dssp EGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSSHHHHHHHH
T ss_pred ecccccccHHHHHHHHHHHHHcCCeEeeccccchhhhhhHHHHHHHhhcCCcccCCHHHHHHHhCCCCCchhHHHHHHHH
Confidence 99877667788999999999999999999998887777788899999999999999999999999887777788888888
Q ss_pred HhcCCC-CCCCCccEEEEeeCCCCEEEEeCCe--EEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHH
Q 019402 244 ISQWPK-ASGTHKRITVITQGADPVVVAEDGK--VKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGC 320 (341)
Q Consensus 244 l~~~~~-~~~~~~~~vvvt~G~~G~~~~~~~~--~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~ 320 (341)
+.++.. ....+.+.+|||+|++|++++.++. ...++.++.+..++||||||||+|+|||+|+|++|+++++|+++|+
T Consensus 267 l~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~v~~~~~~~vVDTtGAGDaF~agfl~~l~~g~~l~~a~~~a~ 346 (372)
T 3uq6_A 267 IADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKPMITSLHAAV 346 (372)
T ss_dssp HHHSCCTTCCCCCCEEEEEETTEEEEEEESSCSSCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HhhhhhhhhcCCceEEEEcCCCCceEEecCCCceeeeeeccCCCCCceeCCCchHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 876432 1245678999999999999987653 3445555555568999999999999999999999999999999999
Q ss_pred HHHhhhhhhccccCCCCCCCC
Q 019402 321 YAANVVIQRSGCTYPPKPEFN 341 (341)
Q Consensus 321 ~~aa~~v~~~g~~~p~~~e~~ 341 (341)
++|+.+|++.|+++|..++++
T Consensus 347 ~aAa~vv~~~Ga~lp~r~~~~ 367 (372)
T 3uq6_A 347 KAAAYIICRSGFSLGSRDSYS 367 (372)
T ss_dssp HHHHHHHTSSSSCCCCGGGCC
T ss_pred HHHHHHHcCCCCCCCChhHHH
Confidence 999999999999999988764
|
| >1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-53 Score=385.10 Aligned_cols=338 Identities=57% Similarity=1.008 Sum_probs=294.9
Q ss_pred cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCC-CceE
Q 019402 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIP-GATS 82 (341)
Q Consensus 4 ~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg-~~v~ 82 (341)
.++|+++|++++|++..++.+++++|++.+|...+.+..+.|.+++.....+....+||++.|+|.++++|.+.+ .++.
T Consensus 6 ~~~v~viG~~~~D~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~lgg~~~~~~~ 85 (345)
T 1bx4_A 6 ENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAAT 85 (345)
T ss_dssp TTCEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHHHHSCCEEEEECHHHHHHHHHHHHHCSSTTCEE
T ss_pred cccEEEECCcceeEEEecCHHHHHHcCCCCCcEEEchHHHHHHHHHHhccCCceecCCcHHHHHHHHHHHhcCCCCCcEE
Confidence 458999999999999999998999999999999998888899999999999999999999999999999842222 8999
Q ss_pred EEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcc-cCCCchhHhhhhcceEE
Q 019402 83 YIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSE-HLKRPEIWSIVEKAKYY 161 (341)
Q Consensus 83 li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v 161 (341)
++|.+|+|.+|+.+++.|++.||+++++...+.+|+.+++++++|+|+++.+.+++..++++ ++......+.++++|++
T Consensus 86 ~ig~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~T~~~~~~~~~g~r~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~v 165 (345)
T 1bx4_A 86 FFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVC 165 (345)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTCEEEEEEESSSCCCEEEEEEETTEEEEEEECGGGGGCCGGGTTTSHHHHHHHHHCSEE
T ss_pred EEEEeCCChhHHHHHHHHHHcCCceeeeecCCCCCceEEEEEcCCceEeeeccchHhhcCcccccCcHHHHHHHhhCCEE
Confidence 99999999999999999999999999987666789999988888888887777888888888 77643344668899999
Q ss_pred EEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHH
Q 019402 162 YIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIA 241 (341)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~ 241 (341)
|++++.+.++++.+..+++.+++.++++++|++.+.+.....+.+.++++++|++++|++|++.|++....+.+++++++
T Consensus 166 ~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~ 245 (345)
T 1bx4_A 166 YIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEIA 245 (345)
T ss_dssp EEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCSHHHHHHTHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCCCHHHHH
T ss_pred EEEEEeccCCHHHHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHHHHHHhccCCEEeCCHHHHHHHhcccCCCCCCHHHHH
Confidence 99998777788999999999999999999999877765555666788999999999999999999987655667889999
Q ss_pred HHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHH
Q 019402 242 LKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCY 321 (341)
Q Consensus 242 ~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~ 321 (341)
+.+.++++....+++.||||+|++|++++++++.+++|++++++.+++|||||||+|+|||+++|++|+++++|+++|++
T Consensus 246 ~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaf~ag~~~~l~~g~~~~~a~~~A~~ 325 (345)
T 1bx4_A 246 KKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGHY 325 (345)
T ss_dssp HHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred HHHHhcccccccCCCEEEEEeCCCCeEEEECCeEEEEeccccCcCccccCCCcchHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 99843210001478999999999999999888888888876544578999999999999999999999999999999999
Q ss_pred HHhhhhhhccccCCCCCCCC
Q 019402 322 AANVVIQRSGCTYPPKPEFN 341 (341)
Q Consensus 322 ~aa~~v~~~g~~~p~~~e~~ 341 (341)
+|+.++++.|+.+|+.+++.
T Consensus 326 ~aa~~v~~~G~~~p~~~~~~ 345 (345)
T 1bx4_A 326 AASIIIRRTGCTFPEKPDFH 345 (345)
T ss_dssp HHHHHTTSSSSCCCSSCCCC
T ss_pred HHHHHHhccCCCCCCcccCC
Confidence 99999999999999988874
|
| >2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-50 Score=371.35 Aligned_cols=329 Identities=33% Similarity=0.539 Sum_probs=278.5
Q ss_pred CCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCce
Q 019402 2 AYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGAT 81 (341)
Q Consensus 2 ~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v 81 (341)
.++++|+|+|++++|++..++.+++.++++..|...+...++.|..++. +.......+||++.|+|.++++|...|.++
T Consensus 30 ~~~~~vlviG~~~lD~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~-~~~~~~~~~GG~~~NvA~~la~Lg~~g~~v 108 (383)
T 2abs_A 30 TGPMRVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTL-DQFNPTSLPGGSALNSVRVVQKLLRKPGSA 108 (383)
T ss_dssp CCCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGGGTG-GGGCCEEEEESHHHHHHHHHHHHHCSTTSE
T ss_pred CCCceEEEECcchheeEeccCHHHHHhcCCCCCceeechhhHHHHHHhh-ccccceeeCCChHHHHHHHHHHhccCCCcE
Confidence 3466999999999999999998899999999999888877778888888 888899999999999999999955335999
Q ss_pred EEEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCCchhHhhhhcceEE
Q 019402 82 SYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYY 161 (341)
Q Consensus 82 ~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 161 (341)
.++|.+|+|.+|+.+++.|++.||+++++...+.+|+.+++++++|+|+++.+.+++..++++. ...+.+.+++++
T Consensus 109 ~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~T~~~~~~~~~g~r~~~~~~~a~~~l~~~~----~~~~~l~~~~~v 184 (383)
T 2abs_A 109 GYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINEKERTLCTHLGACGSFRLPE----DWTTFASGALIF 184 (383)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCCEEEEEEEETTEEEEEEECGGGGGCCCCT----THHHHTTTCCEE
T ss_pred EEEEEecCChhHHHHHHHHHHcCCceeeeecCCCCCeEEEEEEcCCceeEeeccChhhhCChhh----hhHHHhhcCCEE
Confidence 9999999999999999999999999999876667899999888888888877777777777652 234568899999
Q ss_pred EEeccccccCHHHHHHHHHHHHh-cCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCC-------
Q 019402 162 YIAGFFLTVSPESIQMVAEHAAA-KNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWE------- 233 (341)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~~~~-~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~------- 233 (341)
|++++.+.++++.+..+++.+++ .++++++|++.+.|.....+.+.++++++|++++|++|++.|++.....
T Consensus 185 ~~~g~~~~~~~~~~~~~~~~a~~~~g~~v~~d~~~~~~~~~~~~~l~~ll~~~dil~pN~~Ea~~L~g~~~~~~~~~~~~ 264 (383)
T 2abs_A 185 YATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKTAL 264 (383)
T ss_dssp EEEGGGGTTCHHHHHHHHHHHHTSTTCEEEEECCCHHHHHHCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCC-------
T ss_pred EEeeecccCCHHHHHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHHHHHHhhCCEEeCCHHHHHHHhcccCccccccccc
Confidence 99998877788999999999999 8999999998877765556677889999999999999999998765322
Q ss_pred -----CCCHHHHHHHHhcCCCCCCC-CccEEEEeeCCCCEEEE-----eCCeEEEEecccCCCCcccCCCCcchhhHHHH
Q 019402 234 -----TDNVEEIALKISQWPKASGT-HKRITVITQGADPVVVA-----EDGKVKLFPVILLPKEKLVDTNGAGDAFVGGF 302 (341)
Q Consensus 234 -----~~~~~~~~~~l~~~~~~~~~-~~~~vvvt~G~~G~~~~-----~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~ 302 (341)
.++.+++++.+.++.+.... +++.||||+|++|++++ .+++.+++++++++..+++|||||||+|+|||
T Consensus 265 s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag~ 344 (383)
T 2abs_A 265 STANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFVGGF 344 (383)
T ss_dssp ---CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCGGGCCCCTTHHHHHHHHH
T ss_pred ccccccccHHHHHHHHHhccccccccCCCEEEEEcCCCCeEEEEeecCCCCeEEEecCccCCcCCcCcCCChHHHHHHHH
Confidence 23456677777321000013 78899999999999998 56677788876654457899999999999999
Q ss_pred HHHHhcCCCHHHHHHHHHHHHhhhhhhccccCC
Q 019402 303 LSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYP 335 (341)
Q Consensus 303 ~~~l~~g~~~~~a~~~A~~~aa~~v~~~g~~~p 335 (341)
+++|++|+++++|+++|+++|+.+|++.|+.+|
T Consensus 345 ~~~l~~g~~l~~al~~A~a~aa~~v~~~Ga~~p 377 (383)
T 2abs_A 345 LYALSQGKTVKQCIMCGNACAQDVIQHVGFSLS 377 (383)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHTSSSCCCC
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHhcCCccCC
Confidence 999999999999999999999999999999877
|
| >4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-49 Score=363.41 Aligned_cols=309 Identities=27% Similarity=0.396 Sum_probs=268.0
Q ss_pred cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEE
Q 019402 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~l 83 (341)
+++|+++|++++|++..+++.|+.++++.+|...+.+.++....... .......+||++.|+|.++++ +| .++.+
T Consensus 25 ~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~li~~~~~~~l~~~--~~~~~~~~GG~~~N~A~~la~-LG--~~~~~ 99 (352)
T 4e3a_A 25 RFDVLTVGNAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSR--MGPALEASGGSAGNTAAGVAN-LG--GKAAY 99 (352)
T ss_dssp SEEEEEECCCEEEEEEECCHHHHHHTTCCTTSEEECCHHHHHHHHHH--SCSCEEEECCHHHHHHHHHHH-HT--CCEEE
T ss_pred cccEEEECCceeeEEEecCHHHHHHcCCCCCcceEeCHHHHHHHHHH--hhhccEecCCHHHHHHHHHHH-cC--CCeEE
Confidence 57999999999999999999999999999999888876443222221 135578999999999999998 45 99999
Q ss_pred EEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcceEE
Q 019402 84 IGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYY 161 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 161 (341)
+|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.++++++ +|+|+++.+.+++..++++++.. +.+++++++
T Consensus 100 ig~vG~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~~~~ga~~~l~~~~~~~----~~~~~~~~v 175 (352)
T 4e3a_A 100 FGNVAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGERSMNTYLGACVELGPEDVEA----DVVADAKVT 175 (352)
T ss_dssp ECCCCSSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECTTSCEEEEEECGGGGGCCGGGCCH----HHHHTEEEE
T ss_pred EEEECCChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcCCCceEEEeccChhhcCChhhCCH----HHHhhCCEE
Confidence 9999999999999999999999999985 45668999999887 79999888888888899888874 678999999
Q ss_pred EEecccc--ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCC--CCcEEEcCHHHHHHHHhhcCCCCCCH
Q 019402 162 YIAGFFL--TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP--YMDYVFGNETEARTFAKVHGWETDNV 237 (341)
Q Consensus 162 ~i~~~~~--~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~--~~dil~~n~~E~~~l~~~~~~~~~~~ 237 (341)
|++|+.+ +.+.+.+..+++.+++.+.++++|++.+.+....++.+.++++ ++|++++|++|++.|++ .++.
T Consensus 176 ~~~G~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~l~~ll~~~~~dil~~N~~Ea~~l~g-----~~~~ 250 (352)
T 4e3a_A 176 YFEGYLWDPPRAKEAILDCARIAHQHGREMSMTLSDSFCVDRYRGEFLDLMRSGKVDIVFANRQEALSLYQ-----TDDF 250 (352)
T ss_dssp EEEGGGGSSSSHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHTTSCCEEEEEHHHHHHHTT-----CSCH
T ss_pred EEeeeecCCchHHHHHHHHHHHHHHcCCEEEEECCchhhHHHHHHHHHHHhcccCCcEEEeCHHHHHHHhC-----CCCH
Confidence 9999863 3345789999999999999999999877665556677888998 89999999999999987 3577
Q ss_pred HHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHH
Q 019402 238 EEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVR 317 (341)
Q Consensus 238 ~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~ 317 (341)
+++++.+. .+++.||||+|++|++++++++.+++|+++++ +++|||||||+|+|||+++|++|+++++|++
T Consensus 251 ~~a~~~l~-------~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~--~vvDttGAGDaF~agfl~~l~~g~~l~~a~~ 321 (352)
T 4e3a_A 251 EEALNRIA-------ADCKIAAVTMSENGAVILKGRERYYVNAIRIR--EVVDTTGAGDLFASGFLYGYTQGRSLEDCGK 321 (352)
T ss_dssp HHHHHHHH-------HHSSEEEEECGGGCEEEEETTEEEEECCCCCS--CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHh-------cCCCEEEEEECCCceEEEECCEEEEECCccCC--CCcCCCChHHHHHHHHHHHHHcCCCHHHHHH
Confidence 88888873 25789999999999999999999999987652 4899999999999999999999999999999
Q ss_pred HHHHHHhhhhhhccccCC
Q 019402 318 TGCYAANVVIQRSGCTYP 335 (341)
Q Consensus 318 ~A~~~aa~~v~~~g~~~p 335 (341)
+|+++|+.+|++.|+..+
T Consensus 322 ~A~~aAa~~v~~~G~~~~ 339 (352)
T 4e3a_A 322 LGCLAAGIVIQQIGPRPM 339 (352)
T ss_dssp HHHHHHHHHTTSSSSSCS
T ss_pred HHHHHHHHHHcCCCCCCC
Confidence 999999999999999643
|
| >3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-50 Score=358.80 Aligned_cols=295 Identities=20% Similarity=0.253 Sum_probs=255.8
Q ss_pred CcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHh-ccCCceeecCchhHHHHHHHHHHhCCCCce
Q 019402 3 YEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELA-SKENVEYIAGGATQNSIKVAQWMLQIPGAT 81 (341)
Q Consensus 3 ~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v 81 (341)
||++|+++|++++|++..++ ++|.+++.. ...+....+||++.|+|.++++ + |.++
T Consensus 1 Mm~~v~viG~~~~D~~~~~~--------------------~~p~~g~~~~~~~~~~~~~GG~~~NvA~~la~-l--G~~~ 57 (304)
T 3ry7_A 1 MTNKVVILGSTNVDQFLTVE--------------------RYAQPGETLHVEEAQKAFGGGKGANQAIATAR-M--QADT 57 (304)
T ss_dssp -CCEEEEECCCEEEEEEECS--------------------SCCCTTCCCCCSSCCEEEEECHHHHHHHHHHH-T--TCEE
T ss_pred CCCcEEEEccceeEEEEecc--------------------CCCCCCCceecccceeecCCCHHHHHHHHHHH-C--CCCe
Confidence 35699999999999999987 678888777 7788999999999999999998 4 5999
Q ss_pred EEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcce
Q 019402 82 SYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAK 159 (341)
Q Consensus 82 ~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (341)
.++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++.++ +|+++++.+.+++..+++++++. ..+.++++|
T Consensus 58 ~~~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~--~~~~~~~~~ 135 (304)
T 3ry7_A 58 TFITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMTPEDVIN--AKDAIINAD 135 (304)
T ss_dssp EEECEEESSCTTHHHHHHHHHTTCBCTTCEEESSSCCEEEEEEECSSCCEEEEEECGGGGGCCHHHHHT--THHHHHTCS
T ss_pred EEEEEeCCChHHHHHHHHHHHcCCcchhEEEcCCCCCcEEEEEECCCCCEEEEEecCchhcCCHHHHHH--HHHHhccCC
Confidence 999999999999999999999999999985 56778999999987 58998888888878888877654 345688999
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHH
Q 019402 160 YYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEE 239 (341)
Q Consensus 160 ~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~ 239 (341)
++++++ ..+.+.+..+++.+++.+.++++|+.... +...++++++|++++|++|++.+++....+.++.++
T Consensus 136 ~v~~~~---~~~~~~~~~~~~~a~~~~~~v~~D~~~~~------~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~ 206 (304)
T 3ry7_A 136 FVVAQL---EVPIPAIISAFEIAKAHGVTTVLNPAPAK------ALPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKD 206 (304)
T ss_dssp EEEEET---TSCHHHHHHHHHHHHHTTCEEEEECCSCC------CCCHHHHTTCSEECCBHHHHHHHHSCCCCSHHHHHH
T ss_pred EEEEcC---CCCHHHHHHHHHHHHHcCCEEEEeCCccc------cccHHHHHhCCEEecCHHHHHHHhCCCCCChhHHHH
Confidence 999975 56788999999999999999999997531 235678899999999999999999754433345677
Q ss_pred HHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcC-CCHHHHHHH
Q 019402 240 IALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE-KPVEDCVRT 318 (341)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g-~~~~~a~~~ 318 (341)
+++++ ...+++.++||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++| +++++|+++
T Consensus 207 ~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vdttGAGDaf~a~~~~~l~~g~~~~~~a~~~ 277 (304)
T 3ry7_A 207 NANYF------LSIGIKTVLITLGKQGTYFATKNQSQHIEAYKV---NAIDTTAAGDTFIGAFVSRLNKSQDNLADAIDF 277 (304)
T ss_dssp HHHHH------HHTTCCEEEEECGGGCEEEECSSCEEEECCSSC---CSSCCSSHHHHHHHHHHHHCCTTCTTHHHHHHH
T ss_pred HHHHH------HHcCCCEEEEEeCCCceEEEECCeeEEecCCCc---ccCCCCCchHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 88888 456789999999999999999888999988765 78999999999999999999999 999999999
Q ss_pred HHHHHhhhhhhcccc--CCCCCCC
Q 019402 319 GCYAANVVIQRSGCT--YPPKPEF 340 (341)
Q Consensus 319 A~~~aa~~v~~~g~~--~p~~~e~ 340 (341)
|+++|+.++++.|+. +|+.+|+
T Consensus 278 A~~~aa~~~~~~G~~~~~p~~~ev 301 (304)
T 3ry7_A 278 GNKASSLTVQKHGAQASIPLLEEV 301 (304)
T ss_dssp HHHHHHTTSCCCCTGGGCCCHHHH
T ss_pred HHHHHHHHhCCCCccccCCCHHHH
Confidence 999999999999994 6887664
|
| >1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-48 Score=349.41 Aligned_cols=297 Identities=22% Similarity=0.312 Sum_probs=249.9
Q ss_pred CCCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCc
Q 019402 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGA 80 (341)
Q Consensus 1 m~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~ 80 (341)
|+++++|+++|++++|++..++ ++|.+++.....+....+||++.|+|.++++ +| .+
T Consensus 1 m~~~~~v~viG~~~iD~~~~~~--------------------~~p~~g~~~~~~~~~~~~GG~~~N~A~~la~-lG--~~ 57 (309)
T 1rkd_A 1 MQNAGSLVVLGSINADHILNLQ--------------------SFPTPGETVTGNHYQVAFGGKGANQAVAAGR-SG--AN 57 (309)
T ss_dssp ---CCEEEEECCCEEEEEEECS--------------------SCCCTTCCCCCCCEEEEEECHHHHHHHHHHH-HT--CE
T ss_pred CCCCCeEEEECcceEeEEEecC--------------------CCCCCCCeeecCceeecCCCHHHHHHHHHHh-CC--Cc
Confidence 7677899999999999999887 5777777777788899999999999999998 45 99
Q ss_pred eEEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcc
Q 019402 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKA 158 (341)
Q Consensus 81 v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (341)
+.++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.++++++ +|+++++.+.+++..++++++.. ..+.+.++
T Consensus 58 ~~~~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~ 135 (309)
T 1rkd_A 58 IAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEA--QRERIANA 135 (309)
T ss_dssp EEEEEEEESSTTHHHHHHHHHTTTEECTTEEEETTCCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHT--THHHHHHC
T ss_pred eEEEEEECCCHHHHHHHHHHHHcCCCccceEecCCCCCceEEEEECCCCCeEEEEeCCchhcCCHHHHHH--HHHhcccC
Confidence 9999999999999999999999999999885 46678999999887 58888877777777777776643 23467899
Q ss_pred eEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHH
Q 019402 159 KYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVE 238 (341)
Q Consensus 159 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~ 238 (341)
|++++++ ..+.+.+..+++.+++.+.++++|+.... ....++++++|++++|++|++.|++....+.++++
T Consensus 136 ~~v~~~~---~~~~~~~~~~~~~a~~~g~~v~~D~~~~~------~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~ 206 (309)
T 1rkd_A 136 SALLMQL---ESPLESVMAAAKIAHQNKTIVALNPAPAR------ELPDELLALVDIITPNETEAEKLTGIRVENDEDAA 206 (309)
T ss_dssp SEEEECS---SSCHHHHHHHHHHHHHTTCEEEECCCSCC------CCCHHHHTTCSEECCCHHHHHHHHSCCCSSHHHHH
T ss_pred CEEEEeC---CCCHHHHHHHHHHHHHcCCEEEEECCccc------cchHHHHhhCCEEEcCHHHHHHHhCCCCCCHHHHH
Confidence 9999975 45678889999999999999999997531 12345788999999999999999875332223466
Q ss_pred HHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHH
Q 019402 239 EIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRT 318 (341)
Q Consensus 239 ~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~ 318 (341)
++++.+ ...+++.||||+|++|++++++++.+++|++++ +++|||||||+|+|+|+++|++|+++++|+++
T Consensus 207 ~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vdt~GAGD~f~a~~~~~l~~g~~~~~a~~~ 277 (309)
T 1rkd_A 207 KAAQVL------HEKGIRTVLITLGSRGVWASVNGEGQRVPGFRV---QAVDTIAAGDTFNGALITALLEEKPLPEAIRF 277 (309)
T ss_dssp HHHHHH------HHTTCSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHH------HHhCCCEEEEEECCCcEEEEeCCceEEcCCCCC---CcCCCCChHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 777777 456789999999999999998888888887655 78999999999999999999999999999999
Q ss_pred HHHHHhhhhhhcccc--CCCCCCC
Q 019402 319 GCYAANVVIQRSGCT--YPPKPEF 340 (341)
Q Consensus 319 A~~~aa~~v~~~g~~--~p~~~e~ 340 (341)
|+++|+.++++.|+. +|+.+|+
T Consensus 278 a~~~aa~~~~~~G~~~~~p~~~ev 301 (309)
T 1rkd_A 278 AHAAAAIAVTRKGAQPSVPWREEI 301 (309)
T ss_dssp HHHHHHHHHTSSSSGGGCCCHHHH
T ss_pred HHHHHHHHcCCCCccCCCCCHHHH
Confidence 999999999999984 7776553
|
| >2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-47 Score=348.93 Aligned_cols=299 Identities=23% Similarity=0.300 Sum_probs=250.0
Q ss_pred CCCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCc
Q 019402 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGA 80 (341)
Q Consensus 1 m~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~ 80 (341)
|+++++|+++|++++|++..++ ++|.+++..........+||++.|+|.+|++ + |.+
T Consensus 21 m~~~~~vlviG~~~iD~~~~~~--------------------~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~ 77 (331)
T 2fv7_A 21 QEEVAAVVVVGSCMTDLVSLTS--------------------RLPKTGETIHGHKFFIGFGGKGANQCVQAAR-L--GAM 77 (331)
T ss_dssp ---CCSEEEECCCEEEEEEECS--------------------SCCCTTCCCCCSEEEEEEECHHHHHHHHHHH-T--TCC
T ss_pred ccccCCEEEECcccEEEEEecC--------------------CCCCCCceEecCceEECcCCHHHHHHHHHHH-C--CCC
Confidence 5566799999999999999887 5777777777778889999999999999998 4 599
Q ss_pred eEEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcc
Q 019402 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKA 158 (341)
Q Consensus 81 v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (341)
+.++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.++++++ +|+++++.+.+++..++++++.. ..+.+..+
T Consensus 78 ~~~i~~vG~D~~G~~l~~~L~~~Gv~~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~l~~~~~~~--~~~~l~~~ 155 (331)
T 2fv7_A 78 TSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRA--AANVISRA 155 (331)
T ss_dssp EEEEEEEESSHHHHHHHHHHHTTTEECTTEEEESSSCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHH--THHHHHHC
T ss_pred eEEEEEECCChhHHHHHHHHHHcCCcceeeEecCCCCCceEEEEECCCCCeEEEecCCccccCCHHHHHH--HHHhhccC
Confidence 9999999999999999999999999999885 46678999999887 58888877777776777766542 23457889
Q ss_pred eEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHH
Q 019402 159 KYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVE 238 (341)
Q Consensus 159 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~ 238 (341)
|++++++ ..+.+.+..+++.+++.++++++|+.... .....++++++|++++|++|++.|++....+.++++
T Consensus 156 ~~v~~~~---~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~-----~~~~~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~ 227 (331)
T 2fv7_A 156 KVMVCQL---EITPATSLEALTMARRSGVKTLFNPAPAI-----ADLDPQFYTLSDVFCCNESEAEILTGLTVGSAADAG 227 (331)
T ss_dssp SEEEECS---SSCHHHHHHHHHHHHHTTCEEEECCCSCC-----TTCCTHHHHTCSEEEEEHHHHHHHHSSCCCSHHHHH
T ss_pred CEEEEec---CCCHHHHHHHHHHHHHcCCEEEEeCCccc-----ccchHHHHhcCCEEEeCHHHHHHHhCCCCCChhHHH
Confidence 9999975 45668889999999999999999997531 122345778999999999999999875433334566
Q ss_pred HHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCC--eEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcC--CCHHH
Q 019402 239 EIALKISQWPKASGTHKRITVITQGADPVVVAEDG--KVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE--KPVED 314 (341)
Q Consensus 239 ~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~--~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g--~~~~~ 314 (341)
++++.+ ...|++.||||+|++|+++++++ +.+++|++++ +++|||||||+|+|+|+++|++| +++++
T Consensus 228 ~~~~~l------~~~g~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~~~~~ 298 (331)
T 2fv7_A 228 EAALVL------LKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKV---KAVDTTGAGDSFVGALAFYLAYYPNLSLED 298 (331)
T ss_dssp HHHHHH------HTTTCSEEEEECGGGCEEEEESSCCSCEEECCCCC---CCSCCTTHHHHHHHHHHHHHHHCTTSCHHH
T ss_pred HHHHHH------HHcCCCEEEEEECCCceEEEECCCCceeEecCCCC---ccCCCCCchHHHHHHHHHHHHhCCCCCHHH
Confidence 778888 56688999999999999998877 7788887654 88999999999999999999999 99999
Q ss_pred HHHHHHHHHhhhhhhccc--cCCCCCCCC
Q 019402 315 CVRTGCYAANVVIQRSGC--TYPPKPEFN 341 (341)
Q Consensus 315 a~~~A~~~aa~~v~~~g~--~~p~~~e~~ 341 (341)
|+++|+++|+.++++.|+ .+|+.+|++
T Consensus 299 a~~~A~~~aa~~v~~~G~~~~~p~~~ev~ 327 (331)
T 2fv7_A 299 MLNRSNFIAAVSVQAAGTQSSYPYKKDLP 327 (331)
T ss_dssp HHHHHHHHHHHHHTSSSGGGGCCCGGGSC
T ss_pred HHHHHHHHHHHHhCCCCCccCCCCHHHHh
Confidence 999999999999999998 578888763
|
| >4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-46 Score=342.98 Aligned_cols=295 Identities=19% Similarity=0.233 Sum_probs=234.0
Q ss_pred CCCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCc
Q 019402 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGA 80 (341)
Q Consensus 1 m~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~ 80 (341)
|+++++|+++|++++|++...+ ++..........+||++.|+|.+|++ + |.+
T Consensus 23 m~~~~~vlviG~~~iD~~~~~~-------------------------g~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~ 74 (336)
T 4du5_A 23 MTSALDVITFGEAMMLLVADRP-------------------------GPLEHAEAFHKRTAGAETNVAIGLAR-L--GLK 74 (336)
T ss_dssp ---CEEEEEECCCEEEEEESSS-------------------------SCGGGCCEEEEEEECHHHHHHHHHHH-T--TCC
T ss_pred cCCCCCEEEEChhhhhccCCCC-------------------------CccchhhheeecCCCHHHHHHHHHHh-C--CCc
Confidence 5566799999999999997543 33456677889999999999999998 4 599
Q ss_pred eEEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeecee-e--cccccccCCcccCCCchhHhhh
Q 019402 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLV-A--NLSAANCYKSEHLKRPEIWSIV 155 (341)
Q Consensus 81 v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~ 155 (341)
+.++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++..+ +|+++.+ . ..++...++++++.. +.+
T Consensus 75 ~~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~~~~~~~----~~l 150 (336)
T 4du5_A 75 VGWASRLGTDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDE----AWL 150 (336)
T ss_dssp EEEEEEECSSHHHHHHHHHHHTTTCEEEEEEECTTSCCCEEEECCCSCC--CCEEEECTTCTGGGCCGGGCCH----HHH
T ss_pred EEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCcEEEEEEEcCCCCcceEEEECCCChhHhCChhhCCH----hHh
Confidence 9999999999999999999999999999985 56678999888886 5755543 2 246667788877764 578
Q ss_pred hcceEEEEeccccccC---HHHHHHHHHHHHhcCCeEEEeCCc--HHHHh--hhhHHHHhhCCCCcEEEcCHHHHHHHHh
Q 019402 156 EKAKYYYIAGFFLTVS---PESIQMVAEHAAAKNKVFMMNLSA--PFICE--FFREPQEKALPYMDYVFGNETEARTFAK 228 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~---~~~~~~~~~~~~~~~~~v~~d~~~--~~~~~--~~~~~~~~~l~~~dil~~n~~E~~~l~~ 228 (341)
+++++++++++.+..+ .+.+.++++.+++.+.++++|+.. ..|.. ...+.+.++++++|++++|++|++.|++
T Consensus 151 ~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~Ea~~l~g 230 (336)
T 4du5_A 151 LSARHLHATGVFPAISATTLPAARKTMDLMRAAGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTG 230 (336)
T ss_dssp TTEEEEEEESSGGGSCTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSSHHHHHHHHHHHHTTCSEECCBHHHHHHHHC
T ss_pred ccCCEEEEcCchhhCChHHHHHHHHHHHHHHHCCCEEEEeCcCCchhcCChHHHHHHHHHHHHhCCEEECCHHHHHHHhC
Confidence 8999999999765333 367789999999999999999962 22211 1345678899999999999999999987
Q ss_pred hcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhc
Q 019402 229 VHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQ 308 (341)
Q Consensus 229 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~ 308 (341)
.++.+++++.+ ...|++.||||+|++|++++++++.+++|+++++ +++||+||||+|+|||+++|++
T Consensus 231 -----~~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~--~vvdttGAGDaf~a~~~~~l~~ 297 (336)
T 4du5_A 231 -----ETTPEGVARFY------RQLGAKLVVVKLGAEGAYFDGEAGSGRVAGFPVA--EVVDTVGAGDGFAVGVISALLD 297 (336)
T ss_dssp -----CCSHHHHHHHH------HHTTCSEEEEECGGGCEEEEETTEEEEECCCCC---------CHHHHHHHHHHHHHHT
T ss_pred -----CCCHHHHHHHH------HhcCCCEEEEEecCCceEEEECCeEEEeCCccCC--CCCCCccchHHHHHHHHHHHHc
Confidence 35788889988 5567899999999999999999999999887662 3899999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhhhhhcccc--CCCCCCC
Q 019402 309 EKPVEDCVRTGCYAANVVIQRSGCT--YPPKPEF 340 (341)
Q Consensus 309 g~~~~~a~~~A~~~aa~~v~~~g~~--~p~~~e~ 340 (341)
|+++++|+++|+++|+.+|++.|+. +|+.+|+
T Consensus 298 g~~l~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 331 (336)
T 4du5_A 298 GLGVPEAVKRGAWIGARAVQVLGDSEGLPTRAEL 331 (336)
T ss_dssp TCCHHHHHHHHHHHHHHHHC------CCCCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhccCCCccCCCCHHHH
Confidence 9999999999999999999999984 8887664
|
| >3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-47 Score=348.22 Aligned_cols=296 Identities=22% Similarity=0.258 Sum_probs=232.1
Q ss_pred CCCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCc
Q 019402 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGA 80 (341)
Q Consensus 1 m~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~ 80 (341)
|+++++|+++|++++|++...+ ..|.. .......+||++.|+|.+|++ +| .+
T Consensus 1 M~~~~~v~viG~~~iD~~~~~~--------------------~~~~~-----~~~~~~~~GG~~~NvA~~la~-LG--~~ 52 (338)
T 3ljs_A 1 MSLKKTILCFGEALIDMLAQPL--------------------VKKGM-----PRAFLQCAGGAPANVAVAVAR-LG--GA 52 (338)
T ss_dssp ---CCEEEEESCCEEEEEECCC--------------------SSTTS-----CCCEEEEEECHHHHHHHHHHH-HT--CC
T ss_pred CCCCCCEEEEChhhhheeccCC--------------------CCccc-----hhceeecCCChHHHHHHHHHh-CC--CC
Confidence 8999999999999999998776 23332 577889999999999999998 45 99
Q ss_pred eEEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecc--cccccCCcccCCCchhHhhhh
Q 019402 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKRPEIWSIVE 156 (341)
Q Consensus 81 v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 156 (341)
+.++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++.++ +|+|++..+. +++..++++++.. +.++
T Consensus 53 ~~~ig~vG~D~~g~~l~~~l~~~gV~~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~----~~~~ 128 (338)
T 3ljs_A 53 VQFVGMLGSDMFGDFLFDSFAEAGVVTDGIVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQD----ASFS 128 (338)
T ss_dssp EEEESEEESSHHHHHHHHHHHHHTCBCTTCEEESSSCCCEEEEECCSTTCCEEEEECSSCGGGGCCGGGCCH----HHHH
T ss_pred EEEEeeccCCHHHHHHHHHHHHcCCCceeEEEcCCCCceEEEEEECCCCCeEEEEeCCCChhHhCCHhhcCH----hHhc
Confidence 9999999999999999999999999999885 46778999998887 5888865543 5666788887764 5688
Q ss_pred cceEEEEecccc--ccCHHHHHHHHHHHHhcCCeEEEeCCcH--HHH--hhhhHHHHhhCCCCcEEEcCHHHHHHHHhhc
Q 019402 157 KAKYYYIAGFFL--TVSPESIQMVAEHAAAKNKVFMMNLSAP--FIC--EFFREPQEKALPYMDYVFGNETEARTFAKVH 230 (341)
Q Consensus 157 ~~~~v~i~~~~~--~~~~~~~~~~~~~~~~~~~~v~~d~~~~--~~~--~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~ 230 (341)
++|++|++++.+ ..+.+.+..+++.+++.+.++++|+... .|. ....+.+.++++++|++++|++|++.|++..
T Consensus 129 ~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~ 208 (338)
T 3ljs_A 129 DALIFHACSNSMTDADIAEVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANTL 208 (338)
T ss_dssp TEEEEEEEGGGGSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCTTCCTHHHHHHHHHTCSEEEEEHHHHHHHHHHH
T ss_pred CCCEEEECChHhcCchHHHHHHHHHHHHHHcCCEEEEECCCChhhcCCHHHHHHHHHHHHhhCCEEEecHHHHHHHhCCC
Confidence 999999998764 2345788999999999999999998532 221 1235667889999999999999999998854
Q ss_pred CCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcC-
Q 019402 231 GWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE- 309 (341)
Q Consensus 231 ~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g- 309 (341)
.. ..+++++.| ...+++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|
T Consensus 209 ~~---~~~~~~~~l------~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~a~~~~~l~~g~ 276 (338)
T 3ljs_A 209 AA---DANAVIQQL------WQGRAQLLLVTDAAGPVHWYTRTAGGEVPTFRV---QVQDSNAAGDAFVGGMLYTFAQQF 276 (338)
T ss_dssp TS---CHHHHHHHH------TTTTCCEEEEEETTEEEEEEESSCEEEECC--------------CHHHHHHHHHHHHHHC
T ss_pred Ch---hHHHHHHHH------HhcCCCEEEEeeCCCceEEEECCceEEeCCCCC---ccCCCCCccHHHHHHHHHHHHhCC
Confidence 21 223478888 667899999999999999999988899988765 89999999999999999999999
Q ss_pred -------------CCHHHHHHHHHHHHhhhhhhccc--cCCCCCCC
Q 019402 310 -------------KPVEDCVRTGCYAANVVIQRSGC--TYPPKPEF 340 (341)
Q Consensus 310 -------------~~~~~a~~~A~~~aa~~v~~~g~--~~p~~~e~ 340 (341)
+++++|+++|+++|+++|++.|+ .+|+.+|+
T Consensus 277 ~~~~~~~~~~~~~~~l~~al~~A~~~aa~~v~~~Ga~~~~p~~~ev 322 (338)
T 3ljs_A 277 DDAAALIDFCHDPESIVSTLRFAAAVGALAVTRQGAFTAMPMLSEV 322 (338)
T ss_dssp SSTHHHHHHHTCHHHHHHHHHHHHHHHGGGC----CCCCTTHHHHH
T ss_pred CcccchhccccChHHHHHHHHHHHHHHHHHhCCCCCCCCCCCHHHH
Confidence 89999999999999999999998 46776553
|
| >3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-48 Score=344.86 Aligned_cols=277 Identities=19% Similarity=0.238 Sum_probs=242.3
Q ss_pred CCCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCc
Q 019402 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGA 80 (341)
Q Consensus 1 m~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~ 80 (341)
|+| +|+|+|++++|++..++ ++|.+++.....+....+||++.|+|.++++ + |.+
T Consensus 1 M~~--~i~viG~~~iD~~~~~~--------------------~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~-l--G~~ 55 (299)
T 3ikh_A 1 MSL--RVYVTGNITVDETWSIP--------------------DIPKKGASIHGVKVSQDIGGKGANQAIILSR-C--GIE 55 (299)
T ss_dssp -CC--CEEEECCCEEEEEEECS--------------------SCCCTTCEEECEEEEEEEECHHHHHHHHHHH-T--TCC
T ss_pred CCc--eEEEECceEEEEEEecC--------------------CCCCCCCeEEeeeeeeccCCHHHHHHHHHHH-C--CCC
Confidence 554 89999999999999987 6788888888888899999999999999998 4 599
Q ss_pred eEEEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcce
Q 019402 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAK 159 (341)
Q Consensus 81 v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (341)
+.++|.+|+|.+|+.+++.|++.||++++++..+.+|+.+++.++ +|+|+++.+.+++..++++++.. ..+.+.++|
T Consensus 56 ~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~~a~~~l~~~~~~~--~~~~~~~~~ 133 (299)
T 3ikh_A 56 TRLIAATGNDSNGAWIRQQIKNEPLMLLPDGHFNQHSDTSIILNSADGDNAIITTTAAADTFSLDEMIP--HMADAVAGD 133 (299)
T ss_dssp EEEECCCCSSHHHHHHHHHGGGSSCEEESSSCCSSCCEEEEEECSSSCSCEEEEECHHHHHCCHHHHGG--GGTTCCTTC
T ss_pred eEEEEEECCCHHHHHHHHHHHHcCCceeeeEecCCCCcEEEEEEcCCCCeEEEEeCCccccCCHHHHHH--HHhhhccCC
Confidence 999999999999999999999999999998766778999998887 68998887778777888876643 234678999
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHH
Q 019402 160 YYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEE 239 (341)
Q Consensus 160 ~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~ 239 (341)
++++++ ..+.+.+..+++.+++.+.++++|+.... +.+.++++++|++++|++|++.|++
T Consensus 134 ~v~~~g---~~~~~~~~~~~~~a~~~g~~v~~D~~~~~------~~~~~ll~~~dil~~N~~E~~~l~g----------- 193 (299)
T 3ikh_A 134 ILLQQG---NFSLDKTRALFQYARSRGMTTVFNPSPVN------PDFCHLWPLIDIAVVNESEAELLQP----------- 193 (299)
T ss_dssp EEEECS---CSCHHHHHHHHHHHHHTTCEEEECCCSCC------GGGGGCGGGCSEEEEEHHHHHHHCC-----------
T ss_pred EEEECC---CCCHHHHHHHHHHHHHcCCEEEEccccch------hhHHHHHhhCCEEEecHHHHHHHhc-----------
Confidence 999987 45678999999999999999999997542 3466789999999999999988753
Q ss_pred HHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHH-HHHHHHhcCCCHHH-HHH
Q 019402 240 IALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVG-GFLSQLVQEKPVED-CVR 317 (341)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a-~~~~~l~~g~~~~~-a~~ 317 (341)
.+++.+|||+|++|++++++++.+++|++++ +++|||||||+|+| +|+++|++|+++++ |++
T Consensus 194 -------------~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaf~a~~~~~~l~~g~~~~~~a~~ 257 (299)
T 3ikh_A 194 -------------YGVKTLVITQGAAGAWLVQEGQRQFCPAVPA---EALDTTGAGDTFLAVMLASALLRGVAPDALALA 257 (299)
T ss_dssp -------------CSCSEEEEECGGGCEEEECSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHHTTSSSCHHHHH
T ss_pred -------------CCCCEEEEEECCCceEEEeCCceEEeCCCCC---ccCCCCCchHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 2578999999999999998888889988765 78999999999999 99999999999999 999
Q ss_pred HHHHHHhhhhhhcccc--CCCCCCC
Q 019402 318 TGCYAANVVIQRSGCT--YPPKPEF 340 (341)
Q Consensus 318 ~A~~~aa~~v~~~g~~--~p~~~e~ 340 (341)
+|+++|+.+|++.|+. +|+.+|+
T Consensus 258 ~a~~~aa~~v~~~G~~~~~p~~~ev 282 (299)
T 3ikh_A 258 HASRAAAITVSRRGTLSAFPGSREL 282 (299)
T ss_dssp HHHHHHHHHHHSSSSTTTSCCHHHH
T ss_pred HHHHHHHHHhCCCcccccCCCHHHH
Confidence 9999999999999984 6877654
|
| >3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-46 Score=340.97 Aligned_cols=290 Identities=22% Similarity=0.318 Sum_probs=233.5
Q ss_pred CCCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCC--
Q 019402 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIP-- 78 (341)
Q Consensus 1 m~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg-- 78 (341)
|+|+++|+|+|++++|++... ......+||++.|+|.++++ ||
T Consensus 1 m~m~~~i~viG~~~~D~~~~~--------------------------------~~~~~~~GG~~~NvA~~la~---LG~~ 45 (319)
T 3lhx_A 1 MSLSKKIAVIGECMIELSEKG--------------------------------ADVKRGFGGDTLNTSVYIAR---QVDP 45 (319)
T ss_dssp ---CEEEEEESCCEEEEEC-----------------------------------CCEEEEECHHHHHHHHHHT---TSCT
T ss_pred CCccCceeeechhhhhhccCC--------------------------------CceEEecCChHHHHHHHHHH---cCCC
Confidence 888889999999999998532 34578999999999999998 45
Q ss_pred --CceEEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeeccccc---ccCCcccCCCchh
Q 019402 79 --GATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAA---NCYKSEHLKRPEI 151 (341)
Q Consensus 79 --~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~---~~~~~~~~~~~~~ 151 (341)
.++.++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++.++ +|+|+++.+.+.. ..+++++++ +.
T Consensus 46 ~~~~~~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~--~~ 123 (319)
T 3lhx_A 46 AALTVHYVTALGTDSFSQQMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASEQSA--AI 123 (319)
T ss_dssp TTEEEEEECEECSSHHHHHHHHHHHTTTEECTTCEECTTCCCCEEEEEC----CCEEEEECTTCGGGGTTSSSSHH--HH
T ss_pred CCCcEEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEeCCCCCeeEEEecCCCHHHhccCccchh--hH
Confidence 799999999999999999999999999999985 45668999988886 6899887665432 234433332 23
Q ss_pred HhhhhcceEEEEeccccc-c---CHHHHHHHHHHHHhcCCeEEEeCCcH--HHH--hhhhHHHHhhCCCCcEEEcCHHHH
Q 019402 152 WSIVEKAKYYYIAGFFLT-V---SPESIQMVAEHAAAKNKVFMMNLSAP--FIC--EFFREPQEKALPYMDYVFGNETEA 223 (341)
Q Consensus 152 ~~~~~~~~~v~i~~~~~~-~---~~~~~~~~~~~~~~~~~~v~~d~~~~--~~~--~~~~~~~~~~l~~~dil~~n~~E~ 223 (341)
.+.++++|++|++++.+. + +.+.+.++++.+++.+.++++|+... .|. ....+.+.++++++|++++|++|+
T Consensus 124 ~~~l~~~~~v~~~g~~~~~l~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~di~~~n~~E~ 203 (319)
T 3lhx_A 124 CEELANFDYLYLSGISLAILSPTSREKLLSLLRECRAKGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDE 203 (319)
T ss_dssp HHHHTTCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEEEHHHH
T ss_pred HHHhcCCCEEEEcCchhhhcCchhHHHHHHHHHHHHhcCCEEEEeCcCCcccccCHHHHHHHHHHHHhhCCcccCCHHHH
Confidence 467889999999987642 2 33688999999999999999999632 221 223456788999999999999999
Q ss_pred HHHHhhcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEE-EEecccCCCCcccCCCCcchhhHHHH
Q 019402 224 RTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVK-LFPVILLPKEKLVDTNGAGDAFVGGF 302 (341)
Q Consensus 224 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~-~v~~~~~~~~~vvdttGAGDaf~a~~ 302 (341)
+.+++ .++.+++++.+ .+.|++.||||+|++|++++++++.+ ++|++++++++++|||||||+|+|||
T Consensus 204 ~~l~g-----~~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~ 272 (319)
T 3lhx_A 204 DALWG-----QQPVEDVIART------HNAGVKEVVVKRGADSCLVSIAGEALVDVPAVKLPKEKVIDTTAAGDSFSAGY 272 (319)
T ss_dssp HHHHC-----CCCHHHHHHHH------HHTTCSEEEEEETTEEEEEEETTSCCEEECCCCCCGGGCCCCTTHHHHHHHHH
T ss_pred HHHhC-----CCCHHHHHHHH------HhcCCCEEEEEECCCCeEEEECCcceEEcccccCCCCccCCCCCccHHHHHHH
Confidence 99987 35788899998 55688999999999999999877654 88876444568999999999999999
Q ss_pred HHHHhcCCCHHHHHHHHHHHHhhhhhhccccCCCCC
Q 019402 303 LSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKP 338 (341)
Q Consensus 303 ~~~l~~g~~~~~a~~~A~~~aa~~v~~~g~~~p~~~ 338 (341)
+++|++|+++++|+++|+++|+.+|++.|+.+|...
T Consensus 273 ~~~l~~g~~~~~a~~~A~~~aa~~v~~~Ga~~~~~~ 308 (319)
T 3lhx_A 273 LAVRLTGGSAENAAKRGHLTASTVIQYRGAIIPREA 308 (319)
T ss_dssp HHHHTTTCCHHHHHHHHHHHHHHHTTSSSSSCCGGG
T ss_pred HHHHHcCCCHHHHHHHHHHHHHhhhccCCCcCCCCC
Confidence 999999999999999999999999999999877543
|
| >3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-47 Score=343.68 Aligned_cols=276 Identities=21% Similarity=0.238 Sum_probs=240.1
Q ss_pred CCCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCc
Q 019402 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGA 80 (341)
Q Consensus 1 m~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~ 80 (341)
|+||++|+++|++++|++..++ ++|.+++..........+||++.|+|.+|++ | |.+
T Consensus 16 ~~mm~~i~viG~~~iD~~~~v~--------------------~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~ 72 (310)
T 3go6_A 16 GPMAPRVCVVGSVNMDLTFVVD--------------------ALPRPGETVLAASLTRTPGGKGANQAVAAAR-A--GAQ 72 (310)
T ss_dssp ---CCEEEEECCCEEEEEEECS--------------------SCCCTTCCCCCSEEEEEEECHHHHHHHHHHH-T--TCE
T ss_pred ccccCCEEEECCceEEEEEecC--------------------CCCCCCCeEEecceeecCCCHHHHHHHHHHH-C--CCC
Confidence 4578899999999999999987 6788888888888999999999999999998 4 599
Q ss_pred eEEEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcce
Q 019402 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAK 159 (341)
Q Consensus 81 v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (341)
+.++|.+|+|.+|+.+++.|++.||++++++..+.+|+.+++.++ +|+|+++.+.+++..++ ++ .+.++++|
T Consensus 73 ~~~i~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~--~~-----~~~l~~~~ 145 (310)
T 3go6_A 73 VQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLT--PV-----PSAVANCD 145 (310)
T ss_dssp EEEECEECSSHHHHHHHHHHHHTTCBCTTCEECSSCCEEEEEEECTTSCEEEEEECGGGGGCC--CC-----TTTTTTCS
T ss_pred eEEEEEECCCHHHHHHHHHHHHcCCccceeEecCCCCCEEEEEEcCCCCEEEEecCChhhhHH--HH-----HHHhhcCC
Confidence 999999999999999999999999999998666678999999987 68998888777776666 23 25688999
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHH
Q 019402 160 YYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEE 239 (341)
Q Consensus 160 ~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~ 239 (341)
++++++ ..+.+.+..+++.+++.+.++++|+....+ .++.+.++++++|++++|++|++.|++.
T Consensus 146 ~v~~~~---~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~---~~~~~~~ll~~~dil~~N~~Ea~~l~g~---------- 209 (310)
T 3go6_A 146 VLLTQL---EIPVATALAAARAAQSADAVVMVNASPAGQ---DRSSLQDLAAIADVVIANEHEANDWPSP---------- 209 (310)
T ss_dssp EEEECS---SSCHHHHHHHHHHHHHTTCEEEEECCSSSC---CHHHHHHHHHHCSEEEEEHHHHHHSSSC----------
T ss_pred EEEECC---CCCHHHHHHHHHHHHHcCCEEEEcCCcccc---chHHHHHHHhhCCEEEeCHHHHHHHhCC----------
Confidence 999986 467789999999999999999999975432 3455778899999999999999887541
Q ss_pred HHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhc----CCCHHHH
Q 019402 240 IALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQ----EKPVEDC 315 (341)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~----g~~~~~a 315 (341)
++.+|||+|++|++++++++.+++|++++ +++||+||||+|+|||+++|++ |+++++|
T Consensus 210 ---------------~~~vvvt~G~~Ga~~~~~~~~~~~~~~~v---~vvdttGAGDaF~ag~~~~l~~~~~~g~~l~~a 271 (310)
T 3go6_A 210 ---------------PTHFVITLGVRGARYVGADGVFEVPAPTV---TPVDTAGAGDVFAGVLAANWPRNPGSPAERLRA 271 (310)
T ss_dssp ---------------CSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHCCSSSCCHHHHHHH
T ss_pred ---------------CCEEEEEECCCCEEEEECCceEEeCCCCC---CcCcCCCchHHHHHHHHHHHHhcccCCCCHHHH
Confidence 46899999999999999999999988765 7899999999999999999999 9999999
Q ss_pred HHHHHHHHhhhhhhccc--cCCCCCCC
Q 019402 316 VRTGCYAANVVIQRSGC--TYPPKPEF 340 (341)
Q Consensus 316 ~~~A~~~aa~~v~~~g~--~~p~~~e~ 340 (341)
+++|+++|+.+|++.|+ .+|+.+|+
T Consensus 272 ~~~A~~~aa~~v~~~G~~~~~p~~~ev 298 (310)
T 3go6_A 272 LRRACAAGALATLVSGVGDCAPAAAAI 298 (310)
T ss_dssp HHHHHHHHHHHTTSSCSTTCCCCHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCHHHH
Confidence 99999999999999999 57887664
|
| >2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-46 Score=343.92 Aligned_cols=286 Identities=19% Similarity=0.185 Sum_probs=244.4
Q ss_pred cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEE
Q 019402 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~l 83 (341)
+++|+++|++++|++..++ ++|..++..........+||++.|+|.++++ | |.++.+
T Consensus 29 ~~~i~viG~~~iD~~~~~~--------------------~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~~~~ 85 (343)
T 2rbc_A 29 GKHVLCVGAAVLDTLFRVA--------------------DMPKGEGKVLPYEVLQIAEGMASSAAYAVHR-M--GGRASL 85 (343)
T ss_dssp CCEEEEESCCEEEEEEECS--------------------SCCCSSSCCCCSEEEEEEECHHHHHHHHHHH-T--TCEEEE
T ss_pred CCeEEEECcceEEEEeecC--------------------CCCCCCCeEeeeeeEEcCCcHHHHHHHHHHH-c--CCceEE
Confidence 4589999999999999887 4666666666777889999999999999998 4 599999
Q ss_pred EEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcceEE
Q 019402 84 IGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYY 161 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 161 (341)
+|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.++++++ +|+|+++.+.+++..++++++. .+.+.++|++
T Consensus 86 i~~vG~D~~G~~i~~~L~~~GVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~~~~~~~~l~----~~~l~~~~~v 161 (343)
T 2rbc_A 86 WGAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHRLHEKKRACT----PEDIALFDAV 161 (343)
T ss_dssp ECEEESSHHHHHHHHHHHHTTEECTTCEEETTCCCEEEEEEECTTSCEEEEEECCGGGGSSCCCCC----HHHHTTCSEE
T ss_pred EEEeCCCHHHHHHHHHHHHcCCceeeEEEcCCCCCceEEEEECCCCCEEEEEcCCCcccCChhHhc----HhhhCCCCEE
Confidence 9999999999999999999999999985 46678999998887 6888887677766667666654 2567899999
Q ss_pred EEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHh-hCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHH
Q 019402 162 YIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEK-ALPYMDYVFGNETEARTFAKVHGWETDNVEEI 240 (341)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~-~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~ 240 (341)
|+++. .++.+..+++.+++.++++++|+... .+.+.+ +++++|++++|++|++.|++ .++++++
T Consensus 162 ~~~~~----~~~~~~~~~~~a~~~g~~v~~Dp~~~------~~~~~~~ll~~~dil~~N~~Ea~~l~g-----~~~~~~~ 226 (343)
T 2rbc_A 162 LVDVR----WPELALDVLTVARALGKPAILDGDVA------PVETLEGLAPAATHIVFSEPAATRLTG-----LETVKDM 226 (343)
T ss_dssp EECSS----SHHHHHHHHHHHHHTTCCEEEEECSC------CHHHHHHHGGGCSEEEEEHHHHHHHHC-----CSSHHHH
T ss_pred EEcCC----CHHHHHHHHHHHHHCCCEEEEECCcc------ccccHHHHHhcCCEEEeCHHHHHHHcC-----CCCHHHH
Confidence 99874 24678899999999999999999642 244666 89999999999999999986 3468888
Q ss_pred HHHHhcCCCCCCCCc-cEEEEeeCCCCEEEEeCC--eEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHH
Q 019402 241 ALKISQWPKASGTHK-RITVITQGADPVVVAEDG--KVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVR 317 (341)
Q Consensus 241 ~~~l~~~~~~~~~~~-~~vvvt~G~~G~~~~~~~--~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~ 317 (341)
++.+ ...++ +.||||+|++|+++++++ +.+++|++++ +++|||||||+|+|+|+++|++|+++++|++
T Consensus 227 ~~~l------~~~g~~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~~~~l~~g~~~~~a~~ 297 (343)
T 2rbc_A 227 LPVL------HARYPQTFIAVTAGPAGCWWTEADDPTVHFQTTMQV---EAVDTLAAGDIFHGTFALAMAEGMQSRAAVR 297 (343)
T ss_dssp HHHH------HHHSTTSEEEEECGGGCEEEECTTCCCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHH------HHhCCCceEEEEECCcceEEEeCCCceeEEecCCCC---ccccCCChHHHHHHHHHHHHHcCCCHHHHHH
Confidence 8888 45577 899999999999999877 7888887655 7999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhcccc--CCCCCCC
Q 019402 318 TGCYAANVVIQRSGCT--YPPKPEF 340 (341)
Q Consensus 318 ~A~~~aa~~v~~~g~~--~p~~~e~ 340 (341)
+|+++|+.++++.|+. +|+.+|+
T Consensus 298 ~A~~~aa~~v~~~G~~~~~p~~~ev 322 (343)
T 2rbc_A 298 LSSVAAALKCTVFGGRIGAPTREET 322 (343)
T ss_dssp HHHHHHHHHHTSSSGGGGCCCHHHH
T ss_pred HHHHHHHHHhCCCCCccCCCCHHHH
Confidence 9999999999999985 6776553
|
| >3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-47 Score=343.13 Aligned_cols=294 Identities=17% Similarity=0.196 Sum_probs=242.8
Q ss_pred CCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCce
Q 019402 2 AYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGAT 81 (341)
Q Consensus 2 ~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v 81 (341)
.++++|+|+|++++|++...+ ..|.+++.... .....+||++.|+|.+|++ | |.++
T Consensus 4 ~~~~~v~viG~~~vD~~~~~~--------------------~~~~~g~~~~~-~~~~~~GG~~~NvA~~la~-L--G~~v 59 (328)
T 3kzh_A 4 RKEPYLLVFGASVVDVFGFSK--------------------ASYRPYNSTPG-HVKISFGGVCRNIAENMAR-V--GVNT 59 (328)
T ss_dssp CCCCCEEEECCCEEEEEEEES--------------------SCCCTTSEEEE-EEEEEEECHHHHHHHHHHH-T--TCCE
T ss_pred CCCCcEEEECcEEeeeeeccC--------------------CCCCCCCCceE-EEEEccCcHHHHHHHHHHH-c--CCCc
Confidence 347799999999999999887 46666665554 6788999999999999998 4 5999
Q ss_pred EEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeecee-ecccccccCCcccCCCchhHhhhhcc
Q 019402 82 SYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLV-ANLSAANCYKSEHLKRPEIWSIVEKA 158 (341)
Q Consensus 82 ~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (341)
.++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.++++++ +|++.+. ..++....++++.+.. ..+.+..+
T Consensus 60 ~~i~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 137 (328)
T 3kzh_A 60 NFMSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYLAILDENGEMVSAIADMKSIGAMNTDFIDS--KREIFENA 137 (328)
T ss_dssp EEECEECSSHHHHHHHHHHHHHTEECTTCEECTTCCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHHH--THHHHHTC
T ss_pred EEEEEecCcHHHHHHHHHHHHcCCCccceEEeCCCCCeeEEEEEcCCCCEEEEEEchhhhhhCCHHHHHH--HHHhhccC
Confidence 999999999999999999999999999874 56778999999987 5888763 3455555666655432 34578899
Q ss_pred eEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHH
Q 019402 159 KYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVE 238 (341)
Q Consensus 159 ~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~ 238 (341)
+++++++. .+ +.+..+++ +++.+.++++|+..... .+.+.++++++|++++|++|++.+++....+.++.+
T Consensus 138 ~~~~~~~~---~~-~~~~~l~~-a~~~~~~v~~D~~~~~~----~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~ 208 (328)
T 3kzh_A 138 EYTVLDSD---NP-EIMEYLLK-NFKDKTNFILDPVSAEK----ASWVKHLIKDFHTIKPNRHEAEILAGFPITDTDDLI 208 (328)
T ss_dssp SEEEEESS---CH-HHHHHHHH-HHTTTSEEEEECCSHHH----HHTSTTTGGGCSEECCBHHHHHHHHTSCCCSHHHHH
T ss_pred CEEEEeCC---cH-HHHHHHHH-HhhcCCcEEEEeCCHHH----HHHHHHHhcCCcEEeCCHHHHHHHHCCCCCCHHHHH
Confidence 99999873 33 67777777 88899999999976542 234567888999999999999999985544344567
Q ss_pred HHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHH
Q 019402 239 EIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRT 318 (341)
Q Consensus 239 ~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~ 318 (341)
++++.+ .+.+++.+|||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|+++
T Consensus 209 ~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~ag~~~~l~~g~~~~~a~~~ 279 (328)
T 3kzh_A 209 KASNYF------LGLGIKKVFISLDADGIFYNDGVSCGKIKATEV---DVKNVTGAGDSFVAGLGYGYMNKMPIEDIVKF 279 (328)
T ss_dssp HHHHHH------HHHTCCEEEEECGGGCEEEECSSCEEEEEESSC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHH------HHhCCCEEEEEeCCCCEEEEeCCceEEecCCCc---ccCCCCChhHHHHHHHHHHHHcCCCHHHHHHH
Confidence 778888 455789999999999999998888888887765 79999999999999999999999999999999
Q ss_pred HHHHHhhhhhhcccc--CCCCCC
Q 019402 319 GCYAANVVIQRSGCT--YPPKPE 339 (341)
Q Consensus 319 A~~~aa~~v~~~g~~--~p~~~e 339 (341)
|+++|+.+|++.|+. .|+.+|
T Consensus 280 A~a~aa~~v~~~G~~~~~~~~~~ 302 (328)
T 3kzh_A 280 AMTMSNITISHEETIHPDMALDT 302 (328)
T ss_dssp HHHHHHHHHTSSSSSCTTCSHHH
T ss_pred HHHHHHHHhcCCCCCCCcCCHHH
Confidence 999999999999985 455443
|
| >3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-47 Score=345.75 Aligned_cols=295 Identities=16% Similarity=0.161 Sum_probs=236.8
Q ss_pred CCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCce
Q 019402 2 AYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGAT 81 (341)
Q Consensus 2 ~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v 81 (341)
+||++|+++|++++|++...+. .+...........+||++.|+|.++++ + |.++
T Consensus 1 m~m~~i~viG~~~~D~~~~~~~-----------------------~~~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~~ 54 (330)
T 3iq0_A 1 MSLSKVFTIGEILVEIMASKIG-----------------------QPFDQPGIWNGPYPSGAPAIFIDQVTR-L--GVPC 54 (330)
T ss_dssp ---CEEEEESCCEEEEEEEEET-----------------------CCSSSCEEEEEEEEECHHHHHHHHHHH-T--TCCE
T ss_pred CCCCCEEEEcceeEEEeccCCC-----------------------CCccccccccCcCCCCHHHHHHHHHHH-C--CCcE
Confidence 0567999999999999985321 011111112356899999999999998 4 5999
Q ss_pred EEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeecee-ec-ccccccCCcccCCCchhHhhhhc
Q 019402 82 SYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLV-AN-LSAANCYKSEHLKRPEIWSIVEK 157 (341)
Q Consensus 82 ~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~ 157 (341)
.++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++.++ +|++++. .. .++...++++++.. ..+++
T Consensus 55 ~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~i~~~~~g~~~~~~~~~~~a~~~~~~~~~~~----~~~~~ 130 (330)
T 3iq0_A 55 GIISCVGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDE----NILKD 130 (330)
T ss_dssp EEEEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCEEEEEEECC---CEEEEECTTSGGGGCCGGGCCG----GGGTT
T ss_pred EEEEEeCCChHHHHHHHHHHHcCCCeeeEEEcCCCCceEEEEEECCCCCeeEEEeccCChhhhCCHhhCCH----hHhcc
Confidence 999999999999999999999999999985 56778999998887 6888443 22 34556678777764 56889
Q ss_pred ceEEEEecccc--ccCHHHHHHHHHHHHhcCCeEEEeCCcHH--HH-hhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCC
Q 019402 158 AKYYYIAGFFL--TVSPESIQMVAEHAAAKNKVFMMNLSAPF--IC-EFFREPQEKALPYMDYVFGNETEARTFAKVHGW 232 (341)
Q Consensus 158 ~~~v~i~~~~~--~~~~~~~~~~~~~~~~~~~~v~~d~~~~~--~~-~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~ 232 (341)
++++|++++.+ ..+.+.+.++++.+++.++++++|+.... |. ....+.+.++++++|++++|++|++.+++
T Consensus 131 ~~~v~~sg~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g---- 206 (330)
T 3iq0_A 131 CTHFHIMGSSLFSFHMVDAVKKAVTIVKANGGVISFDPNIRKEMLDIPEMRDALHFVLELTDIYMPSEGEVLLLSP---- 206 (330)
T ss_dssp EEEEEEEGGGCSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGGGSHHHHHHHHHHHHTCSEECCBGGGTTTTCS----
T ss_pred CCEEEEechhhcCcchHHHHHHHHHHHHHcCCEEEEcCCCCccccCcHHHHHHHHHHHhhCCEEecCHHHHHHHhC----
Confidence 99999999865 22346788999999999999999996432 22 12345677889999999999999998876
Q ss_pred CCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCH
Q 019402 233 ETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPV 312 (341)
Q Consensus 233 ~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~ 312 (341)
.++++++++.| ...+++.||||+|++|++++++++.+++|++++ +++|||||||+|+|+|+++|++|+++
T Consensus 207 -~~~~~~~~~~l------~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~ 276 (330)
T 3iq0_A 207 -HSTPERAIAGF------LEEGVKEVIVKRGNQGASYYSANEQFHVESYPV---EEVDPTGAGDCFGGAWIACRQLGFDA 276 (330)
T ss_dssp -CSSHHHHHHHH------HHHTCSEEEEECGGGCEEEECSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCH
T ss_pred -CCCHHHHHHHH------HHcCCCEEEEEeCCCceEEEECCceEEecCCCC---ccCCCCChHHHHHHHHHHHHHcCCCH
Confidence 35788888888 456789999999999999998888889988765 89999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhccc--cCCCCCCC
Q 019402 313 EDCVRTGCYAANVVIQRSGC--TYPPKPEF 340 (341)
Q Consensus 313 ~~a~~~A~~~aa~~v~~~g~--~~p~~~e~ 340 (341)
++|+++|+++|+.+|++.|+ .+|+.+|+
T Consensus 277 ~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 306 (330)
T 3iq0_A 277 HRALQYANACGALAVTRRGPMEGTSRLMEI 306 (330)
T ss_dssp HHHHHHHHHHHHHHTTSCSSSTTCCCHHHH
T ss_pred HHHHHHHHHHHHHHHcCcCCCCCCCCHHHH
Confidence 99999999999999999999 57876654
|
| >3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-46 Score=336.04 Aligned_cols=299 Identities=21% Similarity=0.314 Sum_probs=237.1
Q ss_pred CCC-cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCC
Q 019402 1 MAY-EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPG 79 (341)
Q Consensus 1 m~~-~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~ 79 (341)
|+| +++|+|+|++++|++....... ....+.+| ..+....+||++.|+|.+|++ + |.
T Consensus 1 m~m~~~~v~~iG~~~~D~~~~~~~~~------------~~~~~~~p-------~~~~~~~~GG~~~NvA~~la~-L--G~ 58 (325)
T 3h49_A 1 MSLDNLDVICIGAAIVDIPLQPVSKN------------IFDVDSYP-------LERIAMTTGGDAINEATIISR-L--GH 58 (325)
T ss_dssp ----CEEEEEESCCEEEEEECSCCGG------------GGGSSCCC-------CSCCCCEEESHHHHHHHHHHH-T--TC
T ss_pred CCCCCCeEEEEChhhheeeccCCCCc------------cccccccc-------hheeEEccCcHHHHHHHHHHH-C--CC
Confidence 776 5699999999999976432100 00111222 246678999999999999998 4 59
Q ss_pred ceEEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeeccc-ccccCCcccCCCchhHhhhh
Q 019402 80 ATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLS-AANCYKSEHLKRPEIWSIVE 156 (341)
Q Consensus 80 ~v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 156 (341)
++.++|.+|+|.+|+++++.|++.||+++++. ..+.+|+.++++++ +|+|+++...+ +...++++++.. +.+.
T Consensus 59 ~~~~ig~vG~D~~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~----~~~~ 134 (325)
T 3h49_A 59 RTALMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDF----ARFS 134 (325)
T ss_dssp EEEEECEEESSHHHHHHHHHHHHHTCBCSSCEEETTSCCCEEEEEECTTSCEEEECCTTSHHHHCCGGGCCG----GGGG
T ss_pred CeEEEEEECCChHHHHHHHHHHHcCCceeeEEecCCCCCceEEEEECCCCceeEEeccCcccccCChhhcCh----hhhc
Confidence 99999999999999999999999999999985 46678999998887 68998876654 334567766653 5688
Q ss_pred cceEEEEecccc--ccCHHHHHHHHHHHHhcCCeEEEe-CCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCC
Q 019402 157 KAKYYYIAGFFL--TVSPESIQMVAEHAAAKNKVFMMN-LSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWE 233 (341)
Q Consensus 157 ~~~~v~i~~~~~--~~~~~~~~~~~~~~~~~~~~v~~d-~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~ 233 (341)
+++++|++++.. ..+.+.+.++++.+++++..++.+ ++...|. ..+.+.++++++|++++|++|++.|++
T Consensus 135 ~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~d~~~~~~~~~--~~~~~~~~l~~~dil~~N~~E~~~l~g----- 207 (325)
T 3h49_A 135 QAKLLSLASIFNSPLLDGKALTEIFTQAKARQMIICADMIKPRLNE--TLDDICEALSYVDYLFPNFAEAKLLTG----- 207 (325)
T ss_dssp GCSEEEEEEETTSTTSCHHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHHHHTTCSEEECBHHHHHHHHT-----
T ss_pred cCCEEEEecccCCcccCHHHHHHHHHHHHhcCCEEEecCCchhhhh--HHHHHHHHHhhCCEEecCHHHHHHHhC-----
Confidence 999999998653 234578899999999998544332 3332221 234467889999999999999999987
Q ss_pred CCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHH
Q 019402 234 TDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVE 313 (341)
Q Consensus 234 ~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~ 313 (341)
.++.+++++.+ ...|++.||||+|++|++++++++.+++|++++ ++++|||||||+|+|||+++|++|++++
T Consensus 208 ~~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~--~~vvDttGAGDaf~ag~~~~l~~g~~~~ 279 (325)
T 3h49_A 208 KETLDEIADCF------LACGVKTVVIKTGKDGCFIKRGDMTMKVPAVAG--ITAIDTIGAGDNFASGFIAALLEGKNLR 279 (325)
T ss_dssp CSSHHHHHHHH------HTTTCSEEEEECTTSCEEEEETTEEEEECCCSS--CCCSCCTTHHHHHHHHHHHHHHTTCCHH
T ss_pred CCCHHHHHHHH------HHcCCCEEEEEeCCCCeEEEECCeEEEecCcCC--CCCcCCCChhHHHHHHHHHHHHcCCCHH
Confidence 34678888888 567889999999999999999998888887653 2789999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhccc--cCCCCCCC
Q 019402 314 DCVRTGCYAANVVIQRSGC--TYPPKPEF 340 (341)
Q Consensus 314 ~a~~~A~~~aa~~v~~~g~--~~p~~~e~ 340 (341)
+|+++|+++|+.+|++.|+ .+|+.+|+
T Consensus 280 ~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 308 (325)
T 3h49_A 280 ECARFANATAAISVLSVGATTGVKNRKLV 308 (325)
T ss_dssp HHHHHHHHHHHHHHTSSSSSSSCSSSHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCCCCHHHH
Confidence 9999999999999999997 47877654
|
| >3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-47 Score=343.17 Aligned_cols=294 Identities=17% Similarity=0.226 Sum_probs=227.6
Q ss_pred CcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceE
Q 019402 3 YEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATS 82 (341)
Q Consensus 3 ~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~ 82 (341)
++++|+++|++++|++...+ ..|. .+.......+||++.|+|.++++ + |.++.
T Consensus 20 ~~~~v~viG~~~~D~~~~~~--------------------~~p~----~~~~~~~~~~GG~~~NvA~~la~-L--G~~~~ 72 (327)
T 3hj6_A 20 GDLDVVSLGEILVDMISTEE--------------------VNSL----SQSREYTRHFGGSPANIAVNLSR-L--GKKVA 72 (327)
T ss_dssp --CCEEEESCCEEEEECCCC--------------------CSSG----GGCCEEEEEEECHHHHHHHHHHH-T--TCCEE
T ss_pred CCCCEEEEccceEEEeccCC--------------------CCCc----cccceeeeecCcHHHHHHHHHHH-c--CCcEE
Confidence 35689999999999998776 3443 25677889999999999999998 4 59999
Q ss_pred EEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEeCCeeceeecccccccCCcccCCCchhHhhhhcceEE
Q 019402 83 YIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYY 161 (341)
Q Consensus 83 li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 161 (341)
++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++..++|+++++.+.+++..++++++. .+.++++|++
T Consensus 73 ~ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~v~~~~g~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~v 148 (327)
T 3hj6_A 73 LISRLGADAFGNYLLDVLKGEQIITDGIQQDKERRTTIVYVSKSTRTPDWLPYREADMYLQEDDII----FELIKRSKVF 148 (327)
T ss_dssp EECEEESSHHHHHHHHHHHHTTCBCTTCEEESSSCCCEEEECCCTTCCCEEEECSGGGGCCSCCCH----HHHHC--CEE
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCCcccEEEcCCCCceEEEEEecCCCccEEEecChhhhCChhhcC----HhHhccCCEE
Confidence 99999999999999999999999999985 566778888776667888887777777777766544 2568899999
Q ss_pred EEecccc--ccCHHHHHHHHHHHHhcCCeEEEeCCcHH--HH--hhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCC
Q 019402 162 YIAGFFL--TVSPESIQMVAEHAAAKNKVFMMNLSAPF--IC--EFFREPQEKALPYMDYVFGNETEARTFAKVHGWETD 235 (341)
Q Consensus 162 ~i~~~~~--~~~~~~~~~~~~~~~~~~~~v~~d~~~~~--~~--~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~ 235 (341)
|++++.+ +.+.+.+.++++.++++++++++|+.... |. ....+.+.++++++|++++|++|++.+++. +
T Consensus 149 ~~~g~~l~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~-----~ 223 (327)
T 3hj6_A 149 HLSTFILSRKPARDTAIKAFNYAREQGKIVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGP-----D 223 (327)
T ss_dssp EEESHHHHSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCSSSCSHHHHHHHHTTCSEECCBHHHHHHHHTT-----S
T ss_pred EECchHhcCchhHHHHHHHHHHHHHCCCEEEEECCCchhhcCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCC-----C
Confidence 9998754 23457889999999999999999997432 21 113456788999999999999999999874 3
Q ss_pred CHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHH
Q 019402 236 NVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDC 315 (341)
Q Consensus 236 ~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a 315 (341)
+.+++++.+ ...+++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|
T Consensus 224 ~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~ag~~~~l~~g~~~~~a 294 (327)
T 3hj6_A 224 SPENYVKRY------LELGVKAVILTLGEEGVIASDGEEIIRIPAFSE---DAVDVTGAGDAFWSGFICGLLDGYTVKRS 294 (327)
T ss_dssp CSSGGGGGG------TTTTCSEEEEECSTTCEEEECSSCEEESCSSTT---C-----CCHHHHHHHHHHTTSSCSTTHHH
T ss_pred CHHHHHHHH------HhCCCCEEEEEECCCceEEEeCCeeEEcCCccc---ccCCCcChhHHHHHHHHHHHHcCCCHHHH
Confidence 445666777 567899999999999999999888888887755 89999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhccc--cCCCCCCCC
Q 019402 316 VRTGCYAANVVIQRSGC--TYPPKPEFN 341 (341)
Q Consensus 316 ~~~A~~~aa~~v~~~g~--~~p~~~e~~ 341 (341)
+++|+++|+.+|++.|+ .+|+.+|++
T Consensus 295 ~~~A~a~aa~~v~~~G~~~~~p~~~ev~ 322 (327)
T 3hj6_A 295 IKLGNGVAAFKIRGVGALSPVPSKEDII 322 (327)
T ss_dssp HHHHHCCCSSCC----------------
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCHHHHH
Confidence 99999999999999998 589988864
|
| >3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=343.45 Aligned_cols=298 Identities=16% Similarity=0.172 Sum_probs=240.2
Q ss_pred CcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceE
Q 019402 3 YEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATS 82 (341)
Q Consensus 3 ~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~ 82 (341)
||++|+++|++++|++... +++.....+....+||++.|+|.+|++ + |.++.
T Consensus 1 m~~~v~viG~~~~D~~~~~-------------------------~~~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~~~ 52 (346)
T 3ktn_A 1 MSLKIAAFGEVMLRFTPPE-------------------------YLMLEQTEQLRMNFVGTGVNLLANLAH-F--QLETA 52 (346)
T ss_dssp -CCEEEEECCCEEEEECST-------------------------TCCTTTCSCCEEEEECHHHHHHHHHHH-T--TCEEE
T ss_pred CCCcEEEeChhhhhhcCCC-------------------------CCcccccceeEEeccCHHHHHHHHHHH-c--CCCeE
Confidence 3468999999999998522 233456678899999999999999998 4 59999
Q ss_pred EEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeC-Ceeceeec----ccccccCCcccCCCchhHhhhhc
Q 019402 83 YIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVG-GERSLVAN----LSAANCYKSEHLKRPEIWSIVEK 157 (341)
Q Consensus 83 li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~-g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 157 (341)
++|.+|+|.+|+.+++.|++.||+++++...+.+|+.+++..++ ++++++.+ .++...+++++++ ..+.+++
T Consensus 53 ~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~---~~~~~~~ 129 (346)
T 3ktn_A 53 LITKLPANRLGEAGKAALRKLGISDQWVGEKGDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYD---FEAFLAE 129 (346)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCBCTTEEECCSCCEEEEEECCBTTBCCEEEECCCTTSTTTTCCGGGSC---HHHHHTT
T ss_pred EEEecCCCHHHHHHHHHHHHcCCcceEEEeCCCceEEEEEEecCCCCCceEEecCCCCChhhhCChhhcC---hHHHhCC
Confidence 99999999999999999999999999986566778888877664 44455554 3455567777665 2357889
Q ss_pred ceEEEEeccccccCH---HHHHHHHHHHHhcCCeEEEeCC--cHHHH----hhhhHHHHhhCCCCcEEEcCHHHHHHHHh
Q 019402 158 AKYYYIAGFFLTVSP---ESIQMVAEHAAAKNKVFMMNLS--APFIC----EFFREPQEKALPYMDYVFGNETEARTFAK 228 (341)
Q Consensus 158 ~~~v~i~~~~~~~~~---~~~~~~~~~~~~~~~~v~~d~~--~~~~~----~~~~~~~~~~l~~~dil~~n~~E~~~l~~ 228 (341)
+|++|++++.+..++ +.+.++++.+++.++++++|+. ...|. ....+.+.++++++|++++|++|++.|++
T Consensus 130 ~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g 209 (346)
T 3ktn_A 130 VDMVHICGISLSLTEKTRDAALILAQKAHAYQKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLG 209 (346)
T ss_dssp CSEEEECTHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCCHHHHHHHHHHHHHHGGGCSEEECCHHHHHHTSC
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHHHHcCCEEEEeCCCChHHcCCccHHHHHHHHHHHHHhCCEEEccHHHHHHHhC
Confidence 999999997653333 6789999999999999999995 23332 22346688899999999999999999986
Q ss_pred hc-CC---CCCCHHHHHHHHhcCCCCCC-CCccEEEEeeCCCC-------EEEEeCCeEEEEecccCCCCcccCCCCcch
Q 019402 229 VH-GW---ETDNVEEIALKISQWPKASG-THKRITVITQGADP-------VVVAEDGKVKLFPVILLPKEKLVDTNGAGD 296 (341)
Q Consensus 229 ~~-~~---~~~~~~~~~~~l~~~~~~~~-~~~~~vvvt~G~~G-------~~~~~~~~~~~v~~~~~~~~~vvdttGAGD 296 (341)
.. .. +.++.+++++.| .. .|++.||||+|++| ++++++++.+++|++++ +++|||||||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~l------~~~~g~~~vvvT~G~~G~~~~~~g~~~~~~~~~~~~~~~~v---~vvdttGAGD 280 (346)
T 3ktn_A 210 FIPREDLEGEAQETELIQRF------MSQYNLEWFAGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPL---LNLDRIGAGD 280 (346)
T ss_dssp CCCCTTSCHHHHHHHHHHHH------HHHHTCSEEEEEEEEECSSCEEEEEEEECSSCEEECCCEEC---CCSCCTTHHH
T ss_pred CCCCccccchHHHHHHHHHH------HHhcCCCEEEEecCccccccCcceEEEEECCceEEeCCCcc---ccCCCCchhH
Confidence 43 11 112456777777 33 37889999999998 99988888888888766 7899999999
Q ss_pred hhHHHHHHHHhcCCCHHHHHHHHHHHHhhhhhhcccc-CCCCCCC
Q 019402 297 AFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCT-YPPKPEF 340 (341)
Q Consensus 297 af~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~g~~-~p~~~e~ 340 (341)
+|+|||+++|++|+++++|+++|+++|+.++++.|+. +|+.+|+
T Consensus 281 aF~ag~~~~l~~g~~l~~a~~~A~a~aa~~v~~~G~~~~p~~~ev 325 (346)
T 3ktn_A 281 AYAAGILYGYSQNWSLEKAVTFATVNGVLAHTIQGDIPLTTVKQV 325 (346)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSSCCCCCHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCCCCCCCCHHHH
Confidence 9999999999999999999999999999999999985 6766553
|
| >3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-45 Score=331.80 Aligned_cols=294 Identities=19% Similarity=0.238 Sum_probs=240.0
Q ss_pred CCCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCc
Q 019402 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGA 80 (341)
Q Consensus 1 m~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~ 80 (341)
|+++++|+++|++++|++...+ ..|. ....+....+||++.|+|.+|++ + |.+
T Consensus 5 ~~~~~~v~~iG~~~~D~~~~~~--------------------~~p~----~~~~~~~~~~GG~~~NvA~~la~-L--G~~ 57 (319)
T 3pl2_A 5 LTSTHEVLAIGRLGVDIYPLQS--------------------GVGL----ADVQSFGKYLGGSAANVSVAAAR-H--GHN 57 (319)
T ss_dssp --CCCSEEEESCCEEEECBSSS--------------------SCCG----GGCCCBCCEEECHHHHHHHHHHH-T--TCC
T ss_pred cccCCCEEEEChhheeeecccC--------------------CCCc----cccceeeecCCCcHHHHHHHHHH-C--CCc
Confidence 4556799999999999998665 3443 24577789999999999999998 4 599
Q ss_pred eEEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecc--cc-cccCCcccCCCchhHhhh
Q 019402 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANL--SA-ANCYKSEHLKRPEIWSIV 155 (341)
Q Consensus 81 v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~ 155 (341)
+.++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++.++ +|++.++.+. ++ ...++++++.. +.+
T Consensus 58 ~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~----~~~ 133 (319)
T 3pl2_A 58 SALLSRVGNDPFGEYLLAELERLGVDNQYVATDQTFKTPVTFCEIFPPDDFPLYFYREPKAPDLNIESADVSL----DDV 133 (319)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHTTEECTTEEEESSSCCCEEEECCBTTTBCCEEEECCSCCGGGGCCGGGSCH----HHH
T ss_pred eEEEEEeCCCHHHHHHHHHHHHcCCccccEEecCCCCceEEEEEEcCCCCeeEEEecCCCcccccCChhhCCH----HHh
Confidence 9999999999999999999999999999985 56778999988776 5777766553 33 45677777653 678
Q ss_pred hcceEEEEeccccccC--HHHHHHHHHHHHhcCCeEEEeCCc--HHHH--hhhhHHHHhhCCCCcEEEcCHHHHHHHHhh
Q 019402 156 EKAKYYYIAGFFLTVS--PESIQMVAEHAAAKNKVFMMNLSA--PFIC--EFFREPQEKALPYMDYVFGNETEARTFAKV 229 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~--~~~~~~~~~~~~~~~~~v~~d~~~--~~~~--~~~~~~~~~~l~~~dil~~n~~E~~~l~~~ 229 (341)
.++|++|++++.+... .+.+..+++.+++ +.++++|+.. ..|. ....+.+.++++++|++++|++|++.+++
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g- 211 (319)
T 3pl2_A 134 READILWFTLTGFSEEPSRGTHREILTTRAN-RRHTIFDLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIAVG- 211 (319)
T ss_dssp HHCSEEEEEGGGGSSTTHHHHHHHHHHHHTT-CSCEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEECHHHHHHHHS-
T ss_pred ccCCEEEEecccccCchhHHHHHHHHHHHHH-CCcEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEEcCHHHHHHHcC-
Confidence 8999999999865332 2456666776665 5667888752 2221 12356678899999999999999999987
Q ss_pred cCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcC
Q 019402 230 HGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE 309 (341)
Q Consensus 230 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g 309 (341)
.++++++++.| ...+++.++||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|
T Consensus 212 ----~~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g 278 (319)
T 3pl2_A 212 ----ETEPERAGRAL------LERGVELAIVKQGPKGVMAMTKDETVEVPPFFV---DVINGLGAGDAFGGALCHGLLSE 278 (319)
T ss_dssp ----CCSHHHHHHHH------HHTTCSEEEEEEETTEEEEECSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTT
T ss_pred ----CCCHHHHHHHH------HhcCCCEEEEEECCCCeEEEECCceEEeCCccc---CCCCCcCchHHHHHHHHHHHHcC
Confidence 35788888888 556789999999999999998888889988765 78999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhhhhhccc--cCCCCCCC
Q 019402 310 KPVEDCVRTGCYAANVVIQRSGC--TYPPKPEF 340 (341)
Q Consensus 310 ~~~~~a~~~A~~~aa~~v~~~g~--~~p~~~e~ 340 (341)
+++++|+++|+++|++++++.|+ .+|+.+|+
T Consensus 279 ~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 311 (319)
T 3pl2_A 279 WPLEKVLRFANTAGALVASRLECSTAMPTTDEV 311 (319)
T ss_dssp CCHHHHHHHHHHHHHHHHTSSCSGGGCCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhccCCcCCCCCHHHH
Confidence 99999999999999999999998 57887664
|
| >4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-45 Score=330.75 Aligned_cols=288 Identities=18% Similarity=0.246 Sum_probs=236.6
Q ss_pred CCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCce
Q 019402 2 AYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGAT 81 (341)
Q Consensus 2 ~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v 81 (341)
.+|++|+++|++++|++.... + ......+||++.|+|.+|++ ++.|.++
T Consensus 21 ~~m~~i~viG~~~iD~~~~~~----------------------~--------~~~~~~~GG~~~NvA~~la~-Lg~G~~~ 69 (328)
T 4e69_A 21 QSMMHILSIGECMAELAPADL----------------------P--------GTYRLGFAGDTFNTAWYLAR-LRPESRI 69 (328)
T ss_dssp BSSCEEEEESCCEEEEEECSS----------------------T--------TEEEEEEECHHHHHHHHHHH-HCTTSEE
T ss_pred ccCCcEEEecCcEEEEecCCC----------------------C--------CceEEecCCHHHHHHHHHHh-cCCCCcE
Confidence 356799999999999997421 0 45678999999999999999 4225999
Q ss_pred EEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEeCCeeceeecccccc---cCCcccCCCchhHhhhhc
Q 019402 82 SYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVVGGERSLVANLSAAN---CYKSEHLKRPEIWSIVEK 157 (341)
Q Consensus 82 ~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 157 (341)
.++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++.+++|+|+++.+.++.. .++..++ ..+.+++
T Consensus 70 ~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~v~~~~g~r~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 145 (328)
T 4e69_A 70 SYFSAIGDDALSQQMRAAMSAAGIDGGGLRVIPGRTVGLYLITLEQGERSFAYWRGQSAARELAGDADA----LAAAMAR 145 (328)
T ss_dssp EEECEECSSHHHHHHHHHHHHTTEECTTCEECTTCCCEEEEEEEETTEEEEEEECTTCGGGGTTSCHHH----HHHHHTT
T ss_pred EEEEeeCCCHHHHHHHHHHHHcCCccceEEEcCCCCCeEEEEEecCCceEEEEeCCCCHHHhhcCcccc----chHHhcC
Confidence 999999999999999999999999999885 4566899998888889998876655322 1222111 2267889
Q ss_pred ceEEEEeccccc----cCHHHHHHHHHHHHhcCCeEEEeCC--cHHHH--hhhhHHHHhhCCCCcEEEcCHHHHHHHHhh
Q 019402 158 AKYYYIAGFFLT----VSPESIQMVAEHAAAKNKVFMMNLS--APFIC--EFFREPQEKALPYMDYVFGNETEARTFAKV 229 (341)
Q Consensus 158 ~~~v~i~~~~~~----~~~~~~~~~~~~~~~~~~~v~~d~~--~~~~~--~~~~~~~~~~l~~~dil~~n~~E~~~l~~~ 229 (341)
+|++|++++.+. .+.+.+.++++.+++.++++++|+. ...|. ....+.+.++++++|++++|++|++.|++
T Consensus 146 ~~~v~~~g~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g- 224 (328)
T 4e69_A 146 ADVVYFSGITLAILDQCGRATLLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEAAWFG- 224 (328)
T ss_dssp CSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCHHHHHHHHHHHHTTCSEECCBHHHHHHHHT-
T ss_pred CCEEEECCchhhccCchHHHHHHHHHHHHHhCCCEEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEeCCHHHHHHHcC-
Confidence 999999987542 2346788999999999999999994 33331 22345678899999999999999999987
Q ss_pred cCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcC
Q 019402 230 HGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE 309 (341)
Q Consensus 230 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g 309 (341)
.++++++++.+ ...+++.||||+|++|++++++++.+++|+++ .++++|||||||+|+|+|+++|++|
T Consensus 225 ----~~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~--~~~vvdttGAGDaf~a~~~~~l~~g 292 (328)
T 4e69_A 225 ----DAGPDATADRY------ARAGVRSVVVKNGPHAVHFLQDGRRGRVPVPP--VAQVVDTTAAGDSFNAGLLDSVLAG 292 (328)
T ss_dssp ----CSSHHHHHHHH------HTTTCSEEEEBCTTSCEEEEETTEEEEECCCC--CCSCCCCTTHHHHHHHHHHHHHHTT
T ss_pred ----CCCHHHHHHHH------HhcCCCEEEEEeCCCCeEEEeCCceEEecCCC--CCCccCCCChhHHHHHHHHHHHHCC
Confidence 35788899998 56788999999999999999999888888764 2389999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhhhhhccccCCCC
Q 019402 310 KPVEDCVRTGCYAANVVIQRSGCTYPPK 337 (341)
Q Consensus 310 ~~~~~a~~~A~~~aa~~v~~~g~~~p~~ 337 (341)
+++++|+++|+++|+.+|++.|+..|..
T Consensus 293 ~~l~~a~~~A~~~aa~~v~~~Ga~~p~~ 320 (328)
T 4e69_A 293 QPLETAIAAAAALAGQVVQGKGALVEVP 320 (328)
T ss_dssp CCHHHHHHHHHHHHHHHHTSSSSSCCC-
T ss_pred CCHHHHHHHHHHHHHHHHccCCCcCChh
Confidence 9999999999999999999999987754
|
| >2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-46 Score=333.05 Aligned_cols=287 Identities=20% Similarity=0.257 Sum_probs=238.7
Q ss_pred CCC-cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCC
Q 019402 1 MAY-EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPG 79 (341)
Q Consensus 1 m~~-~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~ 79 (341)
|.+ |++|+++|++++|++..++ ++|.+++.....+....+||++.|+|.++++ | |.
T Consensus 1 ~~~~m~~i~viG~~~iD~~~~~~--------------------~~p~~~~~~~~~~~~~~~GG~~~N~A~~la~-L--G~ 57 (302)
T 2c4e_A 1 MGGKMEKITCVGHTALDYIFNVE--------------------KFPEPNTSIQIPSARKYYGGAAANTAVGIKK-L--GV 57 (302)
T ss_dssp -CCCEEEEEEESCCEEEEEEECS--------------------SCCCTTCCCCCSCEEEEEECHHHHHHHHHHH-T--TC
T ss_pred CCCCcCcEEEECceeEEEEeccc--------------------ccCCCCceeeecceeecCCCHHHHHHHHHHH-C--CC
Confidence 444 3489999999999999887 5777777777778899999999999999998 4 59
Q ss_pred ceEEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhc
Q 019402 80 ATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEK 157 (341)
Q Consensus 80 ~v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (341)
++.++|.+|+|.+|+.+++.|++.||+++++. .++.+|+.++++++ +|+++++.+.+++..++++++.. .+
T Consensus 58 ~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~ 130 (302)
T 2c4e_A 58 NSELLSCVGYDFKNSGYERYLKNLDINISKLYYSEEEETPKAWIFTDKDNNQITFFLWGAAKHYKELNPPN-------FN 130 (302)
T ss_dssp EEEEECEECTTTTTSHHHHHHHHTTCBCTTCEECSSSCCCEEEEEECSSCCEECCEECGGGGGGGGCCCCC-------CC
T ss_pred ceEEEEEEeCCCchHHHHHHHHHcCCcccceEeeCCCCCceEEEEECCCCCEEEEEeCChhhhCCHhhcCc-------cc
Confidence 99999999999999999999999999998874 56678999999886 68888877777777777766652 67
Q ss_pred ceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCH
Q 019402 158 AKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNV 237 (341)
Q Consensus 158 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~ 237 (341)
+|++|+++. .++.+..+++.+++.+ ++++|+....+ ....+.+.++++++|++++|++|++.+++.... +.
T Consensus 131 ~~~v~~~~~----~~~~~~~~~~~a~~~g-~v~~D~~~~~~-~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~---~~ 201 (302)
T 2c4e_A 131 TEIVHIATG----DPEFNLKCAKKAYGNN-LVSFDPGQDLP-QYSKEMLLEIIEHTNFLFMNKHEFERASNLLNF---EI 201 (302)
T ss_dssp EEEEEECSS----CHHHHHHHHHHHBTTB-EEEECCGGGGG-GCCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTC---CH
T ss_pred CCEEEEeCC----CcHHHHHHHHHHHhcC-CEEEeCchhhh-hhhHHHHHHHHhcCCEEEcCHHHHHHHhCCCCc---cH
Confidence 999999863 3488899999999999 99999974221 112455778899999999999999999875422 11
Q ss_pred HHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCc-ccCCCCcchhhHHHHHHHHhcCCCHHHHH
Q 019402 238 EEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEK-LVDTNGAGDAFVGGFLSQLVQEKPVEDCV 316 (341)
Q Consensus 238 ~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~-vvdttGAGDaf~a~~~~~l~~g~~~~~a~ 316 (341)
. .+ ... ++.||||+|++|++++++++.+++|++++ + ++||+||||+|+|||+++|++|+++++|+
T Consensus 202 ~----~l------~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~~vdt~GAGDaf~a~~~~~l~~g~~~~~a~ 267 (302)
T 2c4e_A 202 D----DY------LER-VDALIVTKGSKGSVIYTKDKKIEIPCIKA---GKVIDPTGAGDSYRAGFLSAYVKGYDLEKCG 267 (302)
T ss_dssp H----HH------HTT-CSEEEEECGGGCEEEECSSCEEEECCCCC---SCCSCCTTHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred H----HH------Hhc-CCEEEEEECCCceEEEeCCcEEEeCCccC---CcCCcCCCchHHHHHHHHHHHHcCCCHHHHH
Confidence 1 45 344 78999999999999998888888887765 6 89999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhcccc--CCCCCCC
Q 019402 317 RTGCYAANVVIQRSGCT--YPPKPEF 340 (341)
Q Consensus 317 ~~A~~~aa~~v~~~g~~--~p~~~e~ 340 (341)
++|+++|+.++++.|+. +|+.+|+
T Consensus 268 ~~a~~~aa~~~~~~G~~~~~p~~~ev 293 (302)
T 2c4e_A 268 LIGAATASFVVEAKGCQTNLPTWDKV 293 (302)
T ss_dssp HHHHHHHHHHTTSSSSSTTCCCHHHH
T ss_pred HHHHHHHHHHHccccccccCCCHHHH
Confidence 99999999999999983 6766543
|
| >2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=333.47 Aligned_cols=293 Identities=21% Similarity=0.238 Sum_probs=236.5
Q ss_pred cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEE
Q 019402 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~l 83 (341)
|++|+++|++++|++..++ +.|.+++..... ....+||++.|+|.+|++ + |.++.+
T Consensus 3 m~~i~viG~~~~D~~~~~~--------------------~~~~~~~~~~~~-~~~~~GG~~~NvA~~la~-L--G~~~~~ 58 (317)
T 2nwh_A 3 MKKILVLGGAHIDRRGMIE--------------------TETAPGASNPGS-WMEEAGGGGFNAARNLSR-L--GFEVRI 58 (317)
T ss_dssp CCEEEEESCCEEEEEEEES--------------------SSCCTTSCCCEE-EEEEEECHHHHHHHHHHH-T--TCEEEE
T ss_pred CCeEEEECchheEEeeccC--------------------CCCCCCCCceEe-EEEeCCcHHHHHHHHHHh-c--CCCcEE
Confidence 4589999999999999876 345555444433 678999999999999998 4 599999
Q ss_pred EEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEe-CCeeceeecc-cccccCCcccCCCchhHhhhhcceEE
Q 019402 84 IGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV-GGERSLVANL-SAANCYKSEHLKRPEIWSIVEKAKYY 161 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v 161 (341)
+|.+|+|.+|+.+++.|++.||++++++..+.+|+.++++++ +|++++..+. +.+..++++.+......+.+..++++
T Consensus 59 i~~vG~D~~G~~l~~~L~~~gV~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 138 (317)
T 2nwh_A 59 IAPRGGDVTGEVVAEAARQAGVEDTPFTFLDRRTPSYTAILERDGNLVIALADMDLYKLFTPRRLKVRAVREAIIASDFL 138 (317)
T ss_dssp ECEEESSHHHHHHHHHHHHTTCEECCEEETTSCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHTSHHHHHHHHHCSEE
T ss_pred EEeecCCchHHHHHHHHHHcCCCCCCcccCCCCCceEEEEEcCCCCEEEEEcchHHHhhCCHHHhhhhhhhhHhccCCEE
Confidence 999999999999999999999999996566778999999887 6888765443 44456776655531111567889999
Q ss_pred EEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHH
Q 019402 162 YIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIA 241 (341)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~ 241 (341)
++++ ..+.+.+..+++.+++.+.++++|+..... .+.+.++++++|++++|++|++.|++. +.++.++++
T Consensus 139 ~~~~---~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~----~~~~~~ll~~~dil~~N~~E~~~l~g~---~~~~~~~~~ 208 (317)
T 2nwh_A 139 LCDA---NLPEDTLTALGLIARACEKPLAAIAISPAK----AVKLKAALGDIDILFMNEAEARALTGE---TAENVRDWP 208 (317)
T ss_dssp EEET---TSCHHHHHHHHHHHHHTTCCEEEECCSHHH----HGGGTTTGGGCSEEEEEHHHHHHHHC--------CTTHH
T ss_pred EEeC---CCCHHHHHHHHHHHHhcCCeEEEeCCCHHH----HHHHHHHhhhCeEecCCHHHHHHHhCC---ChhHHHHHH
Confidence 9975 456789999999999999999999975431 234567889999999999999999864 224455677
Q ss_pred HHHhcCCCCCCCCccEEEEeeCCCCEEEEeCC-eEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHH
Q 019402 242 LKISQWPKASGTHKRITVITQGADPVVVAEDG-KVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGC 320 (341)
Q Consensus 242 ~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~-~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~ 320 (341)
+.+ ...|++.||||+|++|+++++++ ..+++|++++ +++|||||||+|+|+|+++|++|+++++|+++|+
T Consensus 209 ~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v---~~vdt~GAGDaf~a~~~~~l~~g~~~~~a~~~A~ 279 (317)
T 2nwh_A 209 NIL------RKAGLSGGVVTRGASEVVAFNGTEKAILHPPLIR---EVKDVTGAGDAMASGYLAAIAEGKTIREALRQGA 279 (317)
T ss_dssp HHH------HHTTCCCEEEEETTTEEEEECSSCEEEECCCCSS---SCSCCCCSSHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHH------HHcCCCEEEEEECCCcEEEEcCCCceEEeCCCCc---cccCCCChhHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 777 45578899999999999998766 4677777654 8999999999999999999999999999999999
Q ss_pred HHHhhhhhhcccc--CCCCCC
Q 019402 321 YAANVVIQRSGCT--YPPKPE 339 (341)
Q Consensus 321 ~~aa~~v~~~g~~--~p~~~e 339 (341)
++|+.++++.|+. +|+.+|
T Consensus 280 ~~aa~~v~~~G~~~~~~~~~~ 300 (317)
T 2nwh_A 280 AAAAITVQSSFATSQDLSKDS 300 (317)
T ss_dssp HHHHHHHSSTTCCGGGCCHHH
T ss_pred HHHHHHHcCCCCCCCCCCHHH
Confidence 9999999999995 456544
|
| >1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-45 Score=331.20 Aligned_cols=287 Identities=24% Similarity=0.341 Sum_probs=242.9
Q ss_pred CcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCc-e
Q 019402 3 YEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGA-T 81 (341)
Q Consensus 3 ~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~-v 81 (341)
|-++|+|+|++++|++..++ ++|.+++.....+....+||++.|+|.++++ +| .+ +
T Consensus 13 ~~~~v~vvG~~~iD~~~~~~--------------------~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~ 69 (311)
T 1vm7_A 13 MFLVISVVGSSNIDIVLKVD--------------------HFTKPGETQKAIEMNVFPGGKGANQAVTVAK-IG--EKGC 69 (311)
T ss_dssp CCCCEEEECCCEEEEEEECS--------------------SCCCTTCEEECSEEEEEEECHHHHHHHHHHH-HH--SSCE
T ss_pred ccCCEEEECcceeeEEEecc--------------------cCCCCCceEecCeeeecCCCHHHHHHHHHHH-cC--CCce
Confidence 44689999999999999988 6788888888888899999999999999998 45 89 9
Q ss_pred EEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcce
Q 019402 82 SYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAK 159 (341)
Q Consensus 82 ~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (341)
.++|.+|+|.+|+.+++.|++.|| ++. .++.+|+.+++.++ +|+++++.+.+++..++++++. .+.+++++
T Consensus 70 ~~i~~vG~D~~G~~l~~~L~~~gV---~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~~~~~~----~~~~~~~~ 142 (311)
T 1vm7_A 70 RFVTCIGNDDYSDLLIENYEKLGI---TGYIRVSLPTGRAFIEVDKTGQNRIIIFPGANAELKKELID----WNTLSESD 142 (311)
T ss_dssp EEEEEECSSHHHHHHHHHHHHTTE---EEEEECSSCCCEEEEEECTTSCEEEEEECGGGGGCCGGGCC----HHHHTTCS
T ss_pred EEEEEECCChHHHHHHHHHHHCCC---EEEEcCCCCCeEEEEEECCCCCEEEEEecCccccCCHHHhC----hhhcccCC
Confidence 999999999999999999999999 554 46678999999887 5889888777877788887775 35678999
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHH
Q 019402 160 YYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEE 239 (341)
Q Consensus 160 ~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~ 239 (341)
++++++ ..+.+.+..+ +++.+.++++|+... .+...++++++|++++|++|++.|++....+.+++++
T Consensus 143 ~v~~~~---~~~~~~~~~~---a~~~~~~v~~Dp~~~------~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~ 210 (311)
T 1vm7_A 143 ILLLQN---EIPFETTLEC---AKRFNGIVIFDPAPA------QGINEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEK 210 (311)
T ss_dssp EEEECS---SSCHHHHHHH---HHHCCSEEEECCCSC------TTCCGGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHH
T ss_pred EEEEeC---CCCHHHHHHH---HHHcCCEEEEeCcch------hhhhHHHHhhCCEEeCCHHHHHHHhCCCCCChhHHHH
Confidence 999976 3344444433 778899999999752 1234568899999999999999998764444567888
Q ss_pred HHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHH
Q 019402 240 IALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTG 319 (341)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A 319 (341)
+++.+ ...|++.|+||+|++|++++++++.+++|++++ +++|||||||+|+|+|+++|++|+++++|+++|
T Consensus 211 ~~~~l------~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~~vdttGAGDaf~a~~~~~l~~g~~~~~a~~~A 281 (311)
T 1vm7_A 211 AAEKF------LELGVKNVIVKLGDKGVLLVNKNEKKHFPTFKV---KAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFG 281 (311)
T ss_dssp HHHHH------HHTTCSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHH------HHcCCCEEEEEECCCCeEEEeCCceEEecCCCc---ccCCCCccHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 88888 456889999999999999998888888887654 789999999999999999999999999999999
Q ss_pred HHHHhhhhhhcccc--CCCCCCC
Q 019402 320 CYAANVVIQRSGCT--YPPKPEF 340 (341)
Q Consensus 320 ~~~aa~~v~~~g~~--~p~~~e~ 340 (341)
+++|+.++++.|+. +|+.+|+
T Consensus 282 ~~~aa~~v~~~G~~~~~p~~~ev 304 (311)
T 1vm7_A 282 TAAAAISVTRLGAQSSIPAREEV 304 (311)
T ss_dssp HHHHHHHTTSSSSGGGCCCHHHH
T ss_pred HHHHHHHhCcCCccccCCCHHHH
Confidence 99999999999984 7776553
|
| >3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-45 Score=329.51 Aligned_cols=290 Identities=19% Similarity=0.197 Sum_probs=239.7
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
-+++.+++++|+++.++ ++ .+++.....+....+||++.|+|.++++ + |.++.++|
T Consensus 4 i~~v~~n~~~D~~~~v~--------------------~~-~~g~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~~~~i~ 59 (309)
T 3umo_A 4 IYTLTLAPSLDSATITP--------------------QI-YPEGKLRCTAPVFEPGGGGINVARAIAH-L--GGSATAIF 59 (309)
T ss_dssp EEEECSSCEEEEEEEES--------------------CC-CSSSEEECCCCEEEEESHHHHHHHHHHH-T--TCCEEEEE
T ss_pred EEEEecchhheEEEEcC--------------------cc-cCCCeEEeceeeecCCchHHHHHHHHHH-c--CCCeEEEE
Confidence 56666889999999998 45 5678888899999999999999999998 4 59999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEe--CCeeceeecccccccCCcccCCC-chhHhhhhcceEEE
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV--GGERSLVANLSAANCYKSEHLKR-PEIWSIVEKAKYYY 162 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~ 162 (341)
.+|+| +|+.+++.|+++||+++++...+ +|+.++.+++ +|+++++...++ .+++++++. .+..+.+..+++++
T Consensus 60 ~vG~d-~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~~~~~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~ 135 (309)
T 3umo_A 60 PAGGA-TGEHLVSLLADENVPVATVEAKD-WTRQNLHVHVEASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIESGAILV 135 (309)
T ss_dssp EECHH-HHHHHHHHHHHTTCCEEEEECSS-CCCCCEEEEETTTCCEEEEECCCC--CCCHHHHHHHHHHHTTSCTTCEEE
T ss_pred EecCc-hHHHHHHHHHHcCCceEEEEecC-CCeeEEEEEECCCCcEEEEEcCCC--CCCHHHHHHHHHHHHhcCCCCEEE
Confidence 99999 99999999999999999986543 5666665554 577777666554 355555422 01112235788999
Q ss_pred Eeccc-cccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCC--CcEEEcCHHHHHHHHhhcCCCCCCHHH
Q 019402 163 IAGFF-LTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPY--MDYVFGNETEARTFAKVHGWETDNVEE 239 (341)
Q Consensus 163 i~~~~-~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~--~dil~~n~~E~~~l~~~~~~~~~~~~~ 239 (341)
++++. ...+.+.+.++++.+++.++++++|+... .+.+++++ +|++++|++|++.+++....+.++.++
T Consensus 136 ~~g~~~~~~~~~~~~~~~~~a~~~~~~v~~D~~~~--------~l~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~ 207 (309)
T 3umo_A 136 ISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGE--------ALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRK 207 (309)
T ss_dssp EESCCCTTCCHHHHHHHHHHHHHTTCEEEEECCHH--------HHHHHTSSCCBSEECCBHHHHHHHHTSCCCSTTHHHH
T ss_pred EEccCCCCCCHHHHHHHHHHHHhcCCEEEEECCcH--------HHHHHhccCCCeEEEeCHHHHHHHhCCCCCCHHHHHH
Confidence 99864 34567899999999999999999999643 26677877 499999999999999866555567888
Q ss_pred HHHHHhcCCCCCCCCc-cEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHH
Q 019402 240 IALKISQWPKASGTHK-RITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRT 318 (341)
Q Consensus 240 ~~~~l~~~~~~~~~~~-~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~ 318 (341)
+++.+ .+.+. +.++||+|++|++++++++.+++|++++ +++|||||||+|+|+|+++|++|+++++|+++
T Consensus 208 ~~~~l------~~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGD~f~a~~~~~l~~g~~~~~a~~~ 278 (309)
T 3umo_A 208 AAQEI------VNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPV---KSQSTVGAGDSMVGAMTLKLAENASLEEMVRF 278 (309)
T ss_dssp HHHHH------HHTTSBSCEEEECGGGCEEEECSSCEEEECCCSC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHH------HHcCCCcEEEEEcCcccEEEEECCcEEEEeCCCc---CCCCCcChHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 88888 44555 7899999999999998888888887655 89999999999999999999999999999999
Q ss_pred HHHHHhhhhhhccccCCCCCCC
Q 019402 319 GCYAANVVIQRSGCTYPPKPEF 340 (341)
Q Consensus 319 A~~~aa~~v~~~g~~~p~~~e~ 340 (341)
|+++|+.+|++.|+.+|+.+|+
T Consensus 279 A~~~aa~~v~~~G~~~~~~~ev 300 (309)
T 3umo_A 279 GVAAGSAATLNQGTRLCSHDDT 300 (309)
T ss_dssp HHHHHHHHTTSSTTCCCCHHHH
T ss_pred HHHHHHHHhcCCCCCCCCHHHH
Confidence 9999999999999998887664
|
| >2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-44 Score=324.32 Aligned_cols=297 Identities=20% Similarity=0.245 Sum_probs=236.8
Q ss_pred CCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCce
Q 019402 2 AYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGAT 81 (341)
Q Consensus 2 ~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v 81 (341)
.++++|+++|++++|++...+ ..|. ....+....+||++.|+|.++++ | |.++
T Consensus 9 ~~~~~i~viG~~~~D~~~~~~--------------------~~~~----~~~~~~~~~~GG~~~NvA~~la~-L--G~~~ 61 (332)
T 2qcv_A 9 DREFDLIAIGRACIDLNAVEY--------------------NRPM----EETMTFSKYVGGSPANIVIGSSK-L--GLKA 61 (332)
T ss_dssp CCSEEEEEESCCEEEEEESSC--------------------SSCG----GGCCCEEEEEESHHHHHHHHHHH-T--TCCE
T ss_pred ccCCcEEEECcceEEEecCCC--------------------CCCc----cccceeEecCCCHHHHHHHHHHH-c--CCce
Confidence 345689999999999998654 2332 23467788999999999999998 4 5999
Q ss_pred EEEEeecCCchhHHHHHHHHhcCCceeEee-cC-CCCcceEEEEEe-CCeeceeecc--cccccCCcccCCCchhHhhhh
Q 019402 82 SYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DE-SAPTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKRPEIWSIVE 156 (341)
Q Consensus 82 ~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~-~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 156 (341)
.++|.+|+|.+|+++++.|++.||+++++. .+ ..+|+.+++.++ +|+++++.+. +++..++++++.. ..++
T Consensus 62 ~~i~~vG~D~~G~~l~~~L~~~gV~~~~v~~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~a~~~l~~~~~~~----~~~~ 137 (332)
T 2qcv_A 62 GFIGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNE----AYIR 137 (332)
T ss_dssp EEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCCEEEEEEEETTEEEEEEECTTCGGGGCCGGGCCH----HHHT
T ss_pred EEEEEeCCCHHHHHHHHHHHHcCCCCcceEecCCCCCceEEEEEEcCCCCccEEEECCcchhhhCCHhHCCH----HHHc
Confidence 999999999999999999999999999985 33 357888888765 6777665443 3455677776653 4578
Q ss_pred cceEEEEeccccc--cCHHHHHHHHHHHHhcCCeEEEeCCcH--HHH--hhhhHHHHhhCCCCcEEEcCHHHHHHHHhhc
Q 019402 157 KAKYYYIAGFFLT--VSPESIQMVAEHAAAKNKVFMMNLSAP--FIC--EFFREPQEKALPYMDYVFGNETEARTFAKVH 230 (341)
Q Consensus 157 ~~~~v~i~~~~~~--~~~~~~~~~~~~~~~~~~~v~~d~~~~--~~~--~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~ 230 (341)
++|++|++++.+. .+.+.+..+++.+++.+.++++|+... .|. ....+.+.++++++|++++|++|++.|++..
T Consensus 138 ~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~ 217 (332)
T 2qcv_A 138 RSKLLLVSGTALSKSPSREAVLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENRT 217 (332)
T ss_dssp TEEEEEEEGGGGSSTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHHHCSEEEEEHHHHHHHTTCS
T ss_pred cCCEEEEeCccccCchhHHHHHHHHHHHHHCCCEEEEcCcCchhhcCCHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCC
Confidence 9999999987642 234788899999999999999999642 221 1123456778899999999999999998743
Q ss_pred CCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeC-CeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcC
Q 019402 231 GWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAED-GKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE 309 (341)
Q Consensus 231 ~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~-~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g 309 (341)
. .++..++++.+ ...|++.||||+|++|++++++ ++.+++|++++ +++||+||||+|+|||+++|++|
T Consensus 218 ~--~~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v---~vvdt~GAGDaf~a~~~~~l~~g 286 (332)
T 2qcv_A 218 E--KGDNDETIRYL------FKHSPELIVIKHGVEGSFAYTKAGEAYRGYAYKT---KVLKTFGAGDSYASAFLYALISG 286 (332)
T ss_dssp S--CCCHHHHHHHH------TTSSCSEEEEECGGGCEEEEETTSCEEEECCBCC---CCSCCTTHHHHHHHHHHHHHHTT
T ss_pred c--CCCHHHHHHHH------HHcCCCEEEEEECCcceEEEecCCceEEcCCCCc---cccCCCCcHHHHHHHHHHHHHcC
Confidence 2 24667888888 6678999999999999999887 66788887755 88999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhhhhhcccc--CCCCCCC
Q 019402 310 KPVEDCVRTGCYAANVVIQRSGCT--YPPKPEF 340 (341)
Q Consensus 310 ~~~~~a~~~A~~~aa~~v~~~g~~--~p~~~e~ 340 (341)
+++++|+++|+++|+.++++.|+. +|+.+|+
T Consensus 287 ~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 319 (332)
T 2qcv_A 287 KGIETALKYGSASASIVVSKHSSSDAMPSVEEI 319 (332)
T ss_dssp CCHHHHHHHHHHHHHHHHHC-----CCCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHccCCCccCCCCHHHH
Confidence 999999999999999999999984 6776553
|
| >3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-44 Score=327.98 Aligned_cols=289 Identities=17% Similarity=0.198 Sum_probs=236.9
Q ss_pred CCCcceEEEecCceeee-EeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCC
Q 019402 1 MAYEGILLGMGNPLLDI-SAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPG 79 (341)
Q Consensus 1 m~~~~~i~~iG~~~~D~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~ 79 (341)
|+| .+++.+++++|+ ++.++ ++ .+++..+.......+||++.|+|.+|++ +| .
T Consensus 1 ~~m--i~tvt~np~iD~~~~~v~--------------------~~-~~g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~ 54 (320)
T 3ie7_A 1 MSL--IYTITLNPAIDRLLFIRG--------------------EL-EKRKTNRVIKTEFDCGGKGLHVSGVLSK-FG--I 54 (320)
T ss_dssp -CC--EEEEESSCEEEEEEEESS--------------------SC-CTTSCCCCSEEEEEEESHHHHHHHHHHH-HT--C
T ss_pred Cce--EEEEecchHHeeeEEEcC--------------------Cc-cCCCeeEeceeeecCCchHHHHHHHHHH-cC--C
Confidence 666 789999999999 99998 45 6777888888999999999999999998 45 9
Q ss_pred ceEEEEeecCCchhHHHHHHHHhcCCceeEe-ecCCCCcceEEEEEeCCe--eceeecccccccCCcccCCC--chhHhh
Q 019402 80 ATSYIGCIGKDKFGEEMKKNSTAAGVNVKYY-EDESAPTGTCAVCVVGGE--RSLVANLSAANCYKSEHLKR--PEIWSI 154 (341)
Q Consensus 80 ~v~li~~vG~D~~g~~i~~~l~~~gi~~~~~-~~~~~~t~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~--~~~~~~ 154 (341)
++.++|.+|+| +|+.+++.|++.||+++++ +..+ +|+.+++++++|+ |+++...+ ..++++++.. ....+.
T Consensus 55 ~~~~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~~-~t~~~~~~~~~g~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~ 130 (320)
T 3ie7_A 55 KNEALGIAGSD-NLDKLYAILKEKHINHDFLVEAGT-STRECFVVLSDDTNGSTMIPEAG--FTVSQTNKDNLLKQIAKK 130 (320)
T ss_dssp CEEEEEEEEST-THHHHHHHHHHTTCCBCCEEETTC-CCEEEEEEEETTCSCCEEEECCC--CCCCHHHHHHHHHHHHHH
T ss_pred CeEEEEEecCc-hHHHHHHHHHHcCCceEEEEecCC-CCceEEEEEECCCceeEEEeCCC--CCCCHHHHHHHHHHHHHH
Confidence 99999999998 9999999999999999999 5554 8999998888888 77655444 2455554432 112256
Q ss_pred hhcceEEEEecccc-ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCC-CCcEEEcCHHHHHHHHhhcCC
Q 019402 155 VEKAKYYYIAGFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP-YMDYVFGNETEARTFAKVHGW 232 (341)
Q Consensus 155 ~~~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~-~~dil~~n~~E~~~l~~~~~~ 232 (341)
+.++|+++++++.. ..+.+.+..+++.+++.++++++|+.... +.+.+. ++|++++|++|++.+++..
T Consensus 131 ~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~--------l~~~l~~~~dil~~N~~E~~~l~g~~-- 200 (320)
T 3ie7_A 131 VKKEDMVVIAGSPPPHYTLSDFKELLRTVKATGAFLGCDNSGEY--------LNLAVEMGVDFIKPNEDEVIAILDEK-- 200 (320)
T ss_dssp CCTTCEEEEESCCCTTCCHHHHHHHHHHHHHHTCEEEEECCHHH--------HHHHHHHCCSEECCBTTGGGGGSCTT--
T ss_pred hcCCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCEEEEECChHH--------HHHHHhcCCeEEeeCHHHHHHHhCCC--
Confidence 78999999988653 44568899999999999999999997432 444444 8999999999999987642
Q ss_pred CCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCH
Q 019402 233 ETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPV 312 (341)
Q Consensus 233 ~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~ 312 (341)
.....+.+.++ ... ++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++
T Consensus 201 -~~~~~~~~~~~------~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~ag~~~~l~~g~~~ 269 (320)
T 3ie7_A 201 -TNSLEENIRTL------AEK-IPYLVVSLGAKGSICAHNGKLYQVIPPKV---QERNDTGAGDVFVGAFIAGLAMNMPI 269 (320)
T ss_dssp -CCCHHHHHHHH------TTT-CSEEEEECGGGCEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHTTCCH
T ss_pred -cCCCHHHHHHH------Hhh-CCEEEEEcCCCceEEEeCCcEEEEeCCcc---CCCCCcCchHHHHHHHHHHHHcCCCH
Confidence 12123334444 223 78999999999999999999999988765 89999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhccccCCCCCCC
Q 019402 313 EDCVRTGCYAANVVIQRSGCTYPPKPEF 340 (341)
Q Consensus 313 ~~a~~~A~~~aa~~v~~~g~~~p~~~e~ 340 (341)
++|+++|+++|+.+|++.|+.+|+.+|+
T Consensus 270 ~~a~~~A~a~aa~~v~~~G~~~~~~~ev 297 (320)
T 3ie7_A 270 TETLKVATGCSASKVMQQDSSSFDLEAA 297 (320)
T ss_dssp HHHHHHHHHHHHHHHTSSSSSCCCHHHH
T ss_pred HHHHHHHHHHHHHHHhCcCCCCCCHHHH
Confidence 9999999999999999999988887654
|
| >2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=327.64 Aligned_cols=291 Identities=16% Similarity=0.183 Sum_probs=233.4
Q ss_pred ceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEE
Q 019402 5 GILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li 84 (341)
+.++++|++++|++..++ ++ .+++.....+....+||++.|+|.++++ || .++.++
T Consensus 21 Mi~~v~G~~~~D~~~~~~--------------------~~-~~g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~i 76 (330)
T 2jg1_A 21 MILTLTLNPSVDISYPLT--------------------AL-KLDDVNRVQEVSKTAGGKGLNVTRVLAQ-VG--EPVLAS 76 (330)
T ss_dssp CEEEEESSCEEEEEEEES--------------------CC-CTTSEEEESCCEEEEECHHHHHHHHHHH-HT--CCEEEE
T ss_pred EEEEEecchhheEEEecC--------------------Cc-cCCceEEeceEEEcCCchHHHHHHHHHH-hC--CCeEEE
Confidence 477899999999999987 33 4555666678889999999999999998 45 999999
Q ss_pred EeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCCc--hhHhhhhcceEEE
Q 019402 85 GCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRP--EIWSIVEKAKYYY 162 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~ 162 (341)
|.+|+ .+|+.+++.|++.||+++++...+ +|+.++.++++++++.+...++ .+++++++.. ...+.++++|++|
T Consensus 77 ~~vG~-~~G~~l~~~L~~~gV~~~~v~~~~-~t~~~~~~v~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~v~ 152 (330)
T 2jg1_A 77 GFIGG-ELGQFIAKKLDHADIKHAFYNIKG-ETRNCIAILHEGQQTEILEQGP--EIDNQEAAGFIKHFEQMMEKVEAVA 152 (330)
T ss_dssp EEEEH-HHHHHHHHHHHHTTCEECCEEESS-CCEEEEEEEETTEEEEEEECCC--BCCHHHHHHHHHHHHHHGGGCSEEE
T ss_pred EEecc-hhHHHHHHHHHHCCCceeEEEccC-CCeeEEEEEeCCCcEEEECCCC--CCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 99996 699999999999999999986443 4788877777555554433332 3555444321 1113468899999
Q ss_pred Eecccc-ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCC---CCcEEEcCHHHHHHHHhhcCC-CCCCH
Q 019402 163 IAGFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP---YMDYVFGNETEARTFAKVHGW-ETDNV 237 (341)
Q Consensus 163 i~~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~---~~dil~~n~~E~~~l~~~~~~-~~~~~ 237 (341)
++++.. ..+.+.+.++++.++++++++++|+.... +.++++ ++|++++|++|++.+++.... +.++.
T Consensus 153 ~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~--------l~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~ 224 (330)
T 2jg1_A 153 ISGSLPKGLNQDYYAQIIERCQNKGVPVILDCSGAT--------LQTVLENPYKPTVIKPNISELYQLLNQPLDESLESL 224 (330)
T ss_dssp EESCCCBTSCTTHHHHHHHHHHTTTCCEEEECCHHH--------HHHHHTSSSCCSEECCBHHHHHHHTTSCCCCCHHHH
T ss_pred EECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCcHH--------HHHHHhccCCceEEEeCHHHHHHHhCCCCCCCHHHH
Confidence 988654 34567899999999999999999997432 445555 899999999999999864321 12345
Q ss_pred HHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHH
Q 019402 238 EEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVR 317 (341)
Q Consensus 238 ~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~ 317 (341)
+++++.+ ...|++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|++
T Consensus 225 ~~~~~~l------~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~~~~l~~g~~l~~al~ 295 (330)
T 2jg1_A 225 KQAVSQP------LFEGIEWIIVSLGAQGAFAKHNHTFYRVNIPTI---SVLNPVGSGDSTVAGITSAILNHENDHDLLK 295 (330)
T ss_dssp HHHHHSG------GGTTCSEEEEECGGGCEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHH------HHcCCCEEEEeecCCceEEEeCCCEEEEeCCCc---cccCCCcHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 5666666 556889999999999999998888888887755 8999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhccccCCCCCCC
Q 019402 318 TGCYAANVVIQRSGCTYPPKPEF 340 (341)
Q Consensus 318 ~A~~~aa~~v~~~g~~~p~~~e~ 340 (341)
+|+++|+.++++.|+.+|+.+|+
T Consensus 296 ~A~a~aa~~v~~~G~~~~~~~ev 318 (330)
T 2jg1_A 296 KANTLGMLNAQEAQTGYVNLNNY 318 (330)
T ss_dssp HHHHHHHHHHTSSSSSCCCGGGH
T ss_pred HHHHHHHHHhcCcCCCCCCHHHH
Confidence 99999999999999988887764
|
| >2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=327.77 Aligned_cols=296 Identities=17% Similarity=0.173 Sum_probs=234.3
Q ss_pred CCCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCc
Q 019402 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGA 80 (341)
Q Consensus 1 m~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~ 80 (341)
|.| .|+++|++++|++..++ + |.+++.....+....+||++.|+|.++++ || .+
T Consensus 1 m~m--~i~v~g~~~~D~~~~v~--------------------~-~~~g~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~ 54 (323)
T 2f02_A 1 MSL--IVTVTMNPSIDISYLLD--------------------H-LKLDTVNRTSQVTKTPGGKGLNVTRVIHD-LG--GD 54 (323)
T ss_dssp -CC--EEEEESSCEEEEEEECS--------------------C-CCTTSEEEESCEEEEEESHHHHHHHHHHH-HT--CC
T ss_pred Cce--EEEEecCceeEEEEecC--------------------C-cccCCEEEeceEEEcCCcHHHHHHHHHHH-cC--CC
Confidence 544 89999999999999987 3 56677777788899999999999999998 45 99
Q ss_pred eEEEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCCc--hhHhhhhcc
Q 019402 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRP--EIWSIVEKA 158 (341)
Q Consensus 81 v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 158 (341)
+.++|.+|+ .+|+++++.|++.||+++++...+ +|+.++.++++++++.+...++ .+++++++.. ...+.+.++
T Consensus 55 ~~~~~~vG~-~~G~~i~~~L~~~gV~~~~v~~~~-~t~~~~~~~~~~~~~~~~~~g~--~l~~~~~~~~~~~~~~~~~~~ 130 (323)
T 2f02_A 55 VIATGVLGG-FHGAFIANELKKANIPQAFTSIKE-ETRDSIAILHEGNQTEILEAGP--TVSPEEISNFLENFDQLIKQA 130 (323)
T ss_dssp EEEEEEEEH-HHHHHHHHHHHHTTCCBCCEEESS-CCEEEEEEEETTEEEEEEECCC--BCCHHHHHHHHHHHHHHHTTC
T ss_pred eEEEEEecc-chHHHHHHHHHHCCCceeEEEcCC-CCeeEEEEEcCCCeEEEECCCC--CCCHHHHHHHHHHHHHhccCC
Confidence 999999997 599999999999999999986543 4777777776455544433332 4555544320 112346889
Q ss_pred eEEEEecccc-ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCC-CC-C
Q 019402 159 KYYYIAGFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGW-ET-D 235 (341)
Q Consensus 159 ~~v~i~~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~-~~-~ 235 (341)
|+++++++.+ ..+.+.+..+++.+++.+.++++|+.+.. ..+.+..+ +++|++++|++|++.|++.... +. +
T Consensus 131 ~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~----~~~~l~~~-~~~dil~~N~~E~~~l~g~~~~~~~~~ 205 (323)
T 2f02_A 131 EIVTISGSLAKGLPSDFYQELVQKAHAQEVKVLLDTSGDS----LRQVLQGP-WKPYLIKPNLEELEGLLGQDFSENPLA 205 (323)
T ss_dssp SEEEEESCCCBTSCTTHHHHHHHHHHHTTCEEEEECCTHH----HHHHHHSS-CCCSEECCBHHHHHHHHTCCCCSSCHH
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHHHCCCEEEEECChHH----HHHHHhcc-CCCeEEecCHHHHHHHhCCCCCCCcHH
Confidence 9999988653 24557899999999999999999997543 12222221 6899999999999999874322 12 2
Q ss_pred CHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHH
Q 019402 236 NVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDC 315 (341)
Q Consensus 236 ~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a 315 (341)
++.++++.+ ...|++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|
T Consensus 206 ~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~a~~~~~l~~g~~~~~a 276 (323)
T 2f02_A 206 AVQTALTKP------MFAGIEWIVISLGKDGAIAKHHDQFYRVKIPTI---QAKNPVGSGDATIAGLAYGLAKDAPAAEL 276 (323)
T ss_dssp HHHHHHTSG------GGTTCSEEEEECGGGCEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHH------HHcCCCEEEEeecCCceEEEeCCCEEEEcCCCc---cccCCccHHHHHHHHHHHHHHcCCCHHHH
Confidence 455566666 556889999999999999998888888887655 88999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhccccCCCCCCC
Q 019402 316 VRTGCYAANVVIQRSGCTYPPKPEF 340 (341)
Q Consensus 316 ~~~A~~~aa~~v~~~g~~~p~~~e~ 340 (341)
+++|+++|+.++++.|+.+|+.+|+
T Consensus 277 ~~~A~~~aa~~v~~~G~~~~~~~ev 301 (323)
T 2f02_A 277 LKWGMAAGMANAQERMTGHVDVENV 301 (323)
T ss_dssp HHHHHHHHHHHHHSSSSSCCCHHHH
T ss_pred HHHHHHHHHHHHcCCCcCCCCHHHH
Confidence 9999999999999999988876553
|
| >2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-45 Score=327.75 Aligned_cols=284 Identities=20% Similarity=0.250 Sum_probs=231.5
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
+|+++|++++|++...+ ++.....+....+||++.|+|.++++ | |.++.++|
T Consensus 3 ~v~viG~~~~D~~~~~~-------------------------~~~~~~~~~~~~~GG~~~N~A~~la~-L--G~~~~~i~ 54 (313)
T 2v78_A 3 DVIALGEPLIQFNSFNP-------------------------GPLRFVNYFEKHVAGSELNFCIAVVR-N--HLSCSLIA 54 (313)
T ss_dssp CEEEECCCEEEEEESSS-------------------------SCGGGCCEEEEEEECHHHHHHHHHHH-T--TCCEEEEE
T ss_pred eEEEECcceEEEecCCC-------------------------CcccccceeEecCCChHHHHHHHHHH-C--CCcEEEEE
Confidence 89999999999996332 22345567788999999999999998 4 59999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEE--Ee-CCeeceeec--ccccccCCcccCCCchhHhhhhcce
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVC--VV-GGERSLVAN--LSAANCYKSEHLKRPEIWSIVEKAK 159 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~--~~-~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (341)
.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++. ++ +|++++..+ .+++..++++++.. ..++++|
T Consensus 55 ~vG~D~~g~~~~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~~~g~~~~~~~~~~~a~~~l~~~~~~~----~~~~~~~ 130 (313)
T 2v78_A 55 RVGNDEFGKNIIEYSRAQGIDTSHIKVDNESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINE----NYVRNSR 130 (313)
T ss_dssp EEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCCEEEEEESSSSTTCEEEEEECTTCSGGGCCGGGCCH----HHHHTSS
T ss_pred EeCCCHHHHHHHHHHHHcCCcCceEEEcCCCCceEEEEEEecCCCCCeeEEEeCCcChhHhCChhhCCH----HHhcCCC
Confidence 99999999999999999999999985 456689999988 65 687876544 35566788777653 5678999
Q ss_pred EEEEeccccc---cCHHHHHHHHHHHHhcCCeEEEeCCc--HHHH--hhhhHHHHhhCCCCc--EEEcCHHHHHHHHhhc
Q 019402 160 YYYIAGFFLT---VSPESIQMVAEHAAAKNKVFMMNLSA--PFIC--EFFREPQEKALPYMD--YVFGNETEARTFAKVH 230 (341)
Q Consensus 160 ~v~i~~~~~~---~~~~~~~~~~~~~~~~~~~v~~d~~~--~~~~--~~~~~~~~~~l~~~d--il~~n~~E~~~l~~~~ 230 (341)
++|++++.+. .+.+.+.++++.+++. ++|+.. ..|. ...++.+.++++++| ++++|++|++.+++
T Consensus 131 ~v~~~g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~~l~~~d~~il~~N~~E~~~l~g-- 204 (313)
T 2v78_A 131 LVHSTGITLAISDNAKEAVIKAFELAKSR----SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKILLD-- 204 (313)
T ss_dssp EEEEEHHHHHHCHHHHHHHHHHHHHCSSE----EEECCCCGGGSSCHHHHHHHHHHHHHHSCEEEEEECHHHHHHHHS--
T ss_pred EEEEcCchhhcChHHHHHHHHHHHHHHHh----CcCCcCChhhcCCHHHHHHHHHHHHHhcCeeEEECcHHHHHHHhC--
Confidence 9999987642 2345666777766654 667743 2332 223455778899999 99999999999986
Q ss_pred CCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCC
Q 019402 231 GWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEK 310 (341)
Q Consensus 231 ~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~ 310 (341)
.++++++++++ ...|++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+
T Consensus 205 ---~~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~~~~l~~g~ 272 (313)
T 2v78_A 205 ---VTDPDEAYRKY------KELGVKVLLYKLGSKGAIAYKDNVKAFKDAYKV---PVEDPTGAGDAMAGTFVSLYLQGK 272 (313)
T ss_dssp ---CCCHHHHHHHH------HHTTEEEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTC
T ss_pred ---CCCHHHHHHHH------HhCCCCEEEEEECCCCcEEeeCCcEEEeCCCcC---CccCCCCchHHHHHHHHHHHHcCC
Confidence 35788888888 456789999999999999998888888887765 789999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhhhhhcccc--CCCCCC
Q 019402 311 PVEDCVRTGCYAANVVIQRSGCT--YPPKPE 339 (341)
Q Consensus 311 ~~~~a~~~A~~~aa~~v~~~g~~--~p~~~e 339 (341)
++++|+++|+++|+.++++.|+. +|+.+|
T Consensus 273 ~~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~ 303 (313)
T 2v78_A 273 DIEYSLAHGIAASTLVITVRGDNELTPTLED 303 (313)
T ss_dssp CHHHHHHHHHHHHHHHHTSSSSSTTCCCHHH
T ss_pred CHHHHHHHHHHHHHHHhccCCCCCCCCCHHH
Confidence 99999999999999999999995 576654
|
| >2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=324.73 Aligned_cols=284 Identities=20% Similarity=0.236 Sum_probs=232.0
Q ss_pred ceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEE
Q 019402 5 GILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li 84 (341)
++|+++|++++|++...+ ++.....+....+||++.|+|.++++ | |.++.++
T Consensus 2 ~~v~viG~~~~D~~~~~~-------------------------~~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~~~~~ 53 (311)
T 2dcn_A 2 AKLITLGEILIEFNALSP-------------------------GPLRHVSYFEKHVAGSEANYCVAFIK-Q--GNECGII 53 (311)
T ss_dssp CEEEEESCCEEEEEESSS-------------------------SCGGGCCEEEEEEECHHHHHHHHHHH-T--TCEEEEE
T ss_pred CCEEEECCceEEEecCCC-------------------------CcccccceeeecCCChHHHHHHHHHH-C--CCceEEE
Confidence 489999999999997332 12345567788999999999999998 4 5999999
Q ss_pred EeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCe--eceeec--ccccccCCcccCCCchhHhhhhcc
Q 019402 85 GCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGE--RSLVAN--LSAANCYKSEHLKRPEIWSIVEKA 158 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 158 (341)
|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++.++ +|+ |+++.+ .++...++++++.. ..++++
T Consensus 54 ~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~ 129 (311)
T 2dcn_A 54 AKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDE----EYVKSA 129 (311)
T ss_dssp CEEESSHHHHHHHHHHHHTTCBCTTCEEETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCH----HHHTTC
T ss_pred EEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEECCCCCccceEEEecCcChhhhCChhhcCh----HHHcCC
Confidence 999999999999999999999999885 46678999998886 677 776544 35566787777653 567899
Q ss_pred eEEEEeccccc---cCHHHHHHHHHHHHhcCCeEEEeCCc--HHHH-hhhhHHHHhhCC--CCcEEEcCHHHHHHHHhhc
Q 019402 159 KYYYIAGFFLT---VSPESIQMVAEHAAAKNKVFMMNLSA--PFIC-EFFREPQEKALP--YMDYVFGNETEARTFAKVH 230 (341)
Q Consensus 159 ~~v~i~~~~~~---~~~~~~~~~~~~~~~~~~~v~~d~~~--~~~~-~~~~~~~~~~l~--~~dil~~n~~E~~~l~~~~ 230 (341)
|++|++++.+. .+.+.+.++++.+++. ++|+.. ..|. ....+.+.++++ ++|++++|++|++.+++
T Consensus 130 ~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~l~~~~~dil~~N~~E~~~l~g-- 203 (311)
T 2dcn_A 130 DLVHSSGITLAISSTAKEAVYKAFEIASNR----SFDTNIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKIILG-- 203 (311)
T ss_dssp SEEEEEHHHHHSCHHHHHHHHHHHHHCSSE----EEECCCCTTTSCHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHS--
T ss_pred CEEEEeCcccccChHHHHHHHHHHHHHHHh----CcCccCchhhCChHHHHHHHHHHHhhcCCcEEECCHHHHHHHhC--
Confidence 99999987642 2346677777776655 677753 2332 123345677888 99999999999999986
Q ss_pred CCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCC
Q 019402 231 GWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEK 310 (341)
Q Consensus 231 ~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~ 310 (341)
.++++++++.+ ... ++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+
T Consensus 204 ---~~~~~~~~~~l------~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~ 270 (311)
T 2dcn_A 204 ---ESDPDKAAKAF------SDY-AEIIVMKLGPKGAIVYYDGKKYYSSGYQV---PVEDVTGAGDALGGTFLSLYYKGF 270 (311)
T ss_dssp ---CCCHHHHHHHH------TTT-EEEEEEEEETTEEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHTTTC
T ss_pred ---CCCHHHHHHHH------HHh-CCEEEEEECCCCcEEEeCCcEEEeCCccc---cccCCCCchHHHHHHHHHHHHcCC
Confidence 35788888888 566 88999999999999999888888887765 789999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhhhhhcccc--CCCCCC
Q 019402 311 PVEDCVRTGCYAANVVIQRSGCT--YPPKPE 339 (341)
Q Consensus 311 ~~~~a~~~A~~~aa~~v~~~g~~--~p~~~e 339 (341)
++++|+++|+++|+.++++.|+. +|+.+|
T Consensus 271 ~~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~ 301 (311)
T 2dcn_A 271 EMEKALDYAIVASTLNVMIRGDQENLPTTKD 301 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTSSSSSTTCCCHHH
T ss_pred CHHHHHHHHHHHHHHHhccCCCCCCCCCHHH
Confidence 99999999999999999999985 576654
|
| >3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-44 Score=323.41 Aligned_cols=288 Identities=18% Similarity=0.165 Sum_probs=227.2
Q ss_pred EE-EecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 7 LL-GMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 7 i~-~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
|+ +.|++++|++..++ + |.+++.....+....+||++.|+|.++++ + |.++.++|
T Consensus 4 I~~v~g~~~~D~~~~~~--------------------~-~~~g~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~~~~i~ 59 (309)
T 3cqd_A 4 IYTLTLAPSLDSATITP--------------------Q-IYPEGKLRCTAPVFEPGGGGINVARAIAH-L--GGSATAIF 59 (309)
T ss_dssp EEEECSSCEEEEEEEES--------------------C-CCSSSEEECCCCEEEEESHHHHHHHHHHH-T--TCCEEEEE
T ss_pred EEEEeccchheEEEEcC--------------------C-CcCCCeeeccceeecCCchHHHHHHHHHH-c--CCCeEEEE
Confidence 55 66799999999987 3 45666777788899999999999999998 4 59999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEE-Ee-CCeeceeecccccccCCcccCCCc--hhHhhhhcceEE
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVC-VV-GGERSLVANLSAANCYKSEHLKRP--EIWSIVEKAKYY 161 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~-~~-~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v 161 (341)
.+|+| +|+.+++.|++.||+++++...+ .|+.++.+ ++ +|+++.+..+++ .++++++... ...+.+++ |++
T Consensus 60 ~vG~d-~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~~~~~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~-~~v 134 (309)
T 3cqd_A 60 PAGGA-TGEHLVSLLADENVPVATVEAKD-WTRQNLHVHVEASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIESG-AIL 134 (309)
T ss_dssp EECHH-HHHHHHHHHHHTTCCEEEEECSS-CCCCCEEEEETTTCCEEEEECCCC--CCCHHHHHHHHHHHHTSCTT-CEE
T ss_pred EecCc-hHHHHHHHHHHcCCCceeEEcCC-CCeeEEEEEEcCCCCEEEEEcCCC--CCCHHHHHHHHHHHHHhhcC-CEE
Confidence 99998 99999999999999999986543 36777666 65 577765554443 3444443220 01123567 999
Q ss_pred EEecccc-ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHh-hCCCC-cEEEcCHHHHHHHHhhcCCCCCCHH
Q 019402 162 YIAGFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEK-ALPYM-DYVFGNETEARTFAKVHGWETDNVE 238 (341)
Q Consensus 162 ~i~~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~-~l~~~-dil~~n~~E~~~l~~~~~~~~~~~~ 238 (341)
|++++.. ..+.+.+.++++.+++.+.++++|+.... +.+ +.+++ |++++|++|++.+++....+.+++.
T Consensus 135 ~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~--------~~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~ 206 (309)
T 3cqd_A 135 VISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGEA--------LSAALAIGNIELVKPNQKELSALVNRELTQPDDVR 206 (309)
T ss_dssp EEESCCCTTCCHHHHHHHHHHHHTTTCEEEEECCHHH--------HHHHTTTCCBSEECCBHHHHHHHHTSCCCSTTHHH
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHcCCeEEEECChHH--------HHHHHHhCCCEEEeeCHHHHHHHhCCCCCCHHHHH
Confidence 9998653 34568899999999999999999997532 333 33788 9999999999999876544455677
Q ss_pred HHHHHHhcCCCCCCCC-ccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHH
Q 019402 239 EIALKISQWPKASGTH-KRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVR 317 (341)
Q Consensus 239 ~~~~~l~~~~~~~~~~-~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~ 317 (341)
++++.+ ...| ++.|+||+|++|++++++++.+++|++++ +++|||||||+|+|+|+++|++|+++++|++
T Consensus 207 ~~~~~l------~~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vdttGAGDaf~a~~~~~l~~g~~~~~a~~ 277 (309)
T 3cqd_A 207 KAAQEI------VNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPV---KSQSTVGAGDSMVGAMTLKLAENASLEEMVR 277 (309)
T ss_dssp HHHHHH------HHTTSBSCEEEECGGGCEEEECSSCEEEECCCSC---CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHH------HHcCCCCEEEEEecCCceEEEECCceEEEeCCcc---ccCCCcCcHHHHHHHHHHHHHcCCCHHHHHH
Confidence 888888 4567 88999999999999998877888887654 8999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhccccCCCCCCC
Q 019402 318 TGCYAANVVIQRSGCTYPPKPEF 340 (341)
Q Consensus 318 ~A~~~aa~~v~~~g~~~p~~~e~ 340 (341)
+|+++|+.++++.|+..|+.+|+
T Consensus 278 ~A~~~aa~~~~~~G~~~~~~~~v 300 (309)
T 3cqd_A 278 FGVAAGSAATLNQGTRLCSHDDT 300 (309)
T ss_dssp HHHHHHHHHTC-----CCCHHHH
T ss_pred HHHHHHHHHHcCcCCCCCCHHHH
Confidence 99999999999999988876653
|
| >1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-44 Score=320.92 Aligned_cols=281 Identities=22% Similarity=0.266 Sum_probs=228.3
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
+|+++|++++|++...+ +......+....+||++.|+|.++++ +| .++.++|
T Consensus 3 ~i~viG~~~~D~~~~~~-------------------------~~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~~~~~~ 54 (309)
T 1v1a_A 3 EVVTAGEPLVALVPQEP-------------------------GHLRGKRLLEVYVGGAEVNVAVALAR-LG--VKVGFVG 54 (309)
T ss_dssp SEEEESCCEEEEECSSS-------------------------SCGGGCCEEEEEEECHHHHHHHHHHH-HT--CCEEEEE
T ss_pred cEEEEccceEEEecCCC-------------------------CcccchheeeeecCcHHHHHHHHHHH-cC--CCeEEEE
Confidence 79999999999986332 12344567788999999999999998 45 9999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecc--cccccCCcccCCCchhHhhhhcceEE
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKRPEIWSIVEKAKYY 161 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v 161 (341)
.+|+|.+|+.+++.|++.||+++++. ..+ +|+.+++..+ +|+++++.+. ++...++++++.. ..++++|++
T Consensus 55 ~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~-~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~v 129 (309)
T 1v1a_A 55 RVGEDELGAMVEERLRAEGVDLTHFRRAPG-FTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDP----DYLEGVRFL 129 (309)
T ss_dssp EECSSHHHHHHHHHHHHHTCBCTTEEECSS-CCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCG----GGGTTCSEE
T ss_pred EeCCCHHHHHHHHHHHHcCCCCceEEEcCC-CCEEEEEEECCCCCceEEEeCCCChhhhCCHhhCCh----hHhcCCCEE
Confidence 99999999999999999999999985 455 8999988876 6777765442 4556777776653 457899999
Q ss_pred EEeccccc---cCHHHHHHHHHHHHhcCCeEEEeCCcH--HHH-hhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCC
Q 019402 162 YIAGFFLT---VSPESIQMVAEHAAAKNKVFMMNLSAP--FIC-EFFREPQEKALPYMDYVFGNETEARTFAKVHGWETD 235 (341)
Q Consensus 162 ~i~~~~~~---~~~~~~~~~~~~~~~~~~~v~~d~~~~--~~~-~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~ 235 (341)
|++++.+. .+.+.+.++++.+++.++++++|+... .|. ....+.+.++++++|++++|++|++.+++..
T Consensus 130 ~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~----- 204 (309)
T 1v1a_A 130 HLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSPEEARGFLERALPGVDLLFLSEEEAELLFGRV----- 204 (309)
T ss_dssp EEETTGGGSCHHHHHHHHHHHHHHHTTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEEEEHHHHHHHHSSH-----
T ss_pred EEeCchhccCchHHHHHHHHHHHHHHcCCEEEEeCCCCcccCCHHHHHHHHHHHHHhCCEEECcHHHHHHHhCCH-----
Confidence 99998653 234678889999999999999998642 221 1234557789999999999999999998621
Q ss_pred CHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeC-CeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHH
Q 019402 236 NVEEIALKISQWPKASGTHKRITVITQGADPVVVAED-GKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVED 314 (341)
Q Consensus 236 ~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~-~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~ 314 (341)
+++++. .+++.||||+|++|+++ .+ ++.+++|++++ +++|||||||+|+|||+++|++|+++++
T Consensus 205 --~~~~~~---------~g~~~vvvt~G~~G~~~-~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~~~ 269 (309)
T 1v1a_A 205 --EEALRA---------LSAPEVVLKRGAKGAWA-FVDGRRVEGSAFAV---EAVDPVGAGDAFAAGYLAGAVWGLPVEE 269 (309)
T ss_dssp --HHHHHH---------TCCSEEEEECGGGCEEE-EETTEEEECCCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHH
T ss_pred --HHHHHh---------cCCCEEEEEecCCCeeE-ecCCcEEEeCCCCC---CcCCCCCchHHHHHHHHHHHHcCCCHHH
Confidence 444431 36789999999999998 55 67788887655 7899999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhcccc--CCCCCC
Q 019402 315 CVRTGCYAANVVIQRSGCT--YPPKPE 339 (341)
Q Consensus 315 a~~~A~~~aa~~v~~~g~~--~p~~~e 339 (341)
|+++|+++|+.++++.|+. +|+.+|
T Consensus 270 a~~~a~~~aa~~v~~~G~~~~~~~~~~ 296 (309)
T 1v1a_A 270 RLRLANLLGASVAASRGDHEGAPYRED 296 (309)
T ss_dssp HHHHHHHHHHHHHTSSTTTTTCCCHHH
T ss_pred HHHHHHHHHHHHHcCCCCCcCCCCHHH
Confidence 9999999999999999985 576654
|
| >1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=328.77 Aligned_cols=285 Identities=19% Similarity=0.292 Sum_probs=224.1
Q ss_pred CCCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCc
Q 019402 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGA 80 (341)
Q Consensus 1 m~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~ 80 (341)
|.+|.+|+++|++++|++... .......+||++.|+|.++++ | |.+
T Consensus 21 ~~~m~~ilviG~~~~D~~~~~-------------------------------~~~~~~~~GG~~~NvA~~la~-L--G~~ 66 (339)
T 1tyy_A 21 MKAMNKVWVIGDASVDLVPEK-------------------------------QNSYLKCPGGASANVGVCVAR-L--GGE 66 (339)
T ss_dssp ----CCEEEESCCEEEEEECS-------------------------------SSEEEEEEECHHHHHHHHHHH-T--TCC
T ss_pred ccccCCEEEECcceeEEeccC-------------------------------CCceEEcCCCHHHHHHHHHHH-c--CCC
Confidence 334568999999999999742 134567999999999999998 4 599
Q ss_pred eEEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecc--cccccCCcccCCCchhHhhhh
Q 019402 81 TSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKRPEIWSIVE 156 (341)
Q Consensus 81 v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 156 (341)
+.++|.+|+|.+|+++++.|++.||+++++. ..+.+|+.+++.++ +|+|++..+. +++..++++.. +.+.
T Consensus 67 ~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~------~~l~ 140 (339)
T 1tyy_A 67 CGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQDL------PPFR 140 (339)
T ss_dssp EEEEEEECSSHHHHHHHHHHHTTTEECTTEEECTTSCCCEEEEC-------CEEECCSSCGGGGCCGGGC------CCCC
T ss_pred eEEEEeeCCCHHHHHHHHHHHHcCCCchheEecCCCCCeEEEEEEcCCCCeEEEEecCCChhhhCCcchh------hHhc
Confidence 9999999999999999999999999999985 46678999988776 6888765443 44445554422 3467
Q ss_pred cceEEEEecccc--ccCHHHHHHHHHHHHhcCCeEEEeCCcH--HHH--hhhhHHHHhhCCCCcEEEcCHHHHHHHHhhc
Q 019402 157 KAKYYYIAGFFL--TVSPESIQMVAEHAAAKNKVFMMNLSAP--FIC--EFFREPQEKALPYMDYVFGNETEARTFAKVH 230 (341)
Q Consensus 157 ~~~~v~i~~~~~--~~~~~~~~~~~~~~~~~~~~v~~d~~~~--~~~--~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~ 230 (341)
++|++|++++.+ ..+.+.+.++++.+++.++++++|+... .|. ....+.+.++++++|++++|++|++.|++.
T Consensus 141 ~~~~v~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~- 219 (339)
T 1tyy_A 141 QYEWFYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGA- 219 (339)
T ss_dssp TTCEEEEEHHHHSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHCC-
T ss_pred cCCEEEEcchhhcCcccHHHHHHHHHHHHHcCCEEEEeCCCCccccCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCC-
Confidence 899999998653 2344788899999999999999998632 221 123455777889999999999999999873
Q ss_pred CCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcC-
Q 019402 231 GWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE- 309 (341)
Q Consensus 231 ~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g- 309 (341)
++++++++.+ ...|++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|
T Consensus 220 ----~~~~~~~~~l------~~~g~~~VvvT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~~~~l~~g~ 286 (339)
T 1tyy_A 220 ----SHWQDARYYL------RDLGCDTTIISLGADGALLITAEGEFHFPAPRV---DVVDTTGAGDAFVGGLLFTLSRAN 286 (339)
T ss_dssp ----SSGGGGSSTT------GGGTCSCEEEECGGGCEEEESSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHTTSS
T ss_pred ----CCHHHHHHHH------HHcCCCEEEEEECCCceEEEeCCceEEcCCCCC---CcCCCCCchHHHHHHHHHHHHhcc
Confidence 3455566655 456788999999999999998888888887755 79999999999999999999997
Q ss_pred ----CCHHHHHHHHHHHHhhhhhhccc--cCCCCCC
Q 019402 310 ----KPVEDCVRTGCYAANVVIQRSGC--TYPPKPE 339 (341)
Q Consensus 310 ----~~~~~a~~~A~~~aa~~v~~~g~--~~p~~~e 339 (341)
+++++|+++|+++|+.++++.|+ .+|+.+|
T Consensus 287 ~~~~~~l~~a~~~A~a~aa~~v~~~G~~~~~p~~~e 322 (339)
T 1tyy_A 287 CWDHALLAEAISNANACGAMAVTAKGAMTALPFPDQ 322 (339)
T ss_dssp SCCHHHHHHHHHHHHHHHHHGGGSSSTTTTCCCHHH
T ss_pred ccccccHHHHHHHHHHHHHHHhCCCCCCCCCCCHHH
Confidence 89999999999999999999998 4576554
|
| >4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-44 Score=328.03 Aligned_cols=294 Identities=17% Similarity=0.182 Sum_probs=230.0
Q ss_pred cceEEEecCceeeeEee--cCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCce
Q 019402 4 EGILLGMGNPLLDISAV--VDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGAT 81 (341)
Q Consensus 4 ~~~i~~iG~~~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v 81 (341)
+++|+|+|++++|++.. ++. ++ ...|.+ ..........+||+ .|+|.++++ + |.++
T Consensus 53 ~~~ilvvG~~~~D~~~~g~v~r--------------~~--p~~p~~--~~~~~~~~~~~GG~-~NvA~~la~-L--G~~v 110 (352)
T 4e84_A 53 RSRVLVVGDVMLDRYWFGNVDR--------------IS--PEAPVP--VVHVQRQEERLGGA-ANVARNAVT-L--GGQA 110 (352)
T ss_dssp TCEEEEEECEEEEEEEEEEEEE--------------EC--SSSSSE--EEEEEEEEEEEEEH-HHHHHHHHH-T--TCEE
T ss_pred CCcEEEECccceEEEEeecccc--------------cC--CCCCcc--eEEeeEEEEecChH-HHHHHHHHH-c--CCCE
Confidence 56899999999999986 320 00 022333 35567788999997 899999998 4 5999
Q ss_pred EEEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeec-eeecc-cccccCCcccCCCchhHhhhhcce
Q 019402 82 SYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERS-LVANL-SAANCYKSEHLKRPEIWSIVEKAK 159 (341)
Q Consensus 82 ~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 159 (341)
.++|.+|+|.+|+.+++.|++.||++..++..+.+|+.+++.++++++. .+... +++.....+.+ ....+.+.++|
T Consensus 111 ~~ig~vG~D~~G~~i~~~L~~~GV~~~~~~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~ 188 (352)
T 4e84_A 111 GLLCVVGCDEPGERIVELLGSSGVTPHLERDPALPTTIKLRVLARQQQLLRVDFEAMPTHEVLLAGL--ARFDVLLPQHD 188 (352)
T ss_dssp EEEEEEESSHHHHHHHHHHTTTSCEEEEEEETTSCCCEEEEEEESSCEEEEEEECCCCCHHHHHHHH--HHHHHHGGGCS
T ss_pred EEEEEeCCChhHHHHHHHHHHcCCceeeEECCCCCCceEEEEEcCCceEEEEEcCCCCCHHHHHHHH--HHHHHhcccCC
Confidence 9999999999999999999999999966666777899998888754443 33221 22111111111 11235688999
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHH
Q 019402 160 YYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEE 239 (341)
Q Consensus 160 ~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~ 239 (341)
+++++++.. .+.+.+.++++.+++.|+++++|++... .++++++|++++|++|++.+++ ...+.++..+
T Consensus 189 ~v~~~g~~~-~~~~~~~~~~~~a~~~g~~v~~D~~~~~---------~~~l~~~dil~pN~~Ea~~l~g-~~~~~~~~~~ 257 (352)
T 4e84_A 189 VVLMSDYAK-GGLTHVTTMIEKARAAGKAVLVDPKGDD---------WARYRGASLITPNRAELREVVG-QWKSEDDLRA 257 (352)
T ss_dssp EEEEECCSS-SSCSSHHHHHHHHHHTTCEEEEECCSSC---------CSTTTTCSEECCBHHHHHHHHC-CCSSHHHHHH
T ss_pred EEEEeCCCC-CCHHHHHHHHHHHHhcCCEEEEECCCcc---------hhhccCCcEEcCCHHHHHHHhC-CCCCHHHHHH
Confidence 999997642 2334588899999999999999997532 2478899999999999999987 2223345566
Q ss_pred HHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHH
Q 019402 240 IALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTG 319 (341)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A 319 (341)
+++.+.+ ..|++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|+++|
T Consensus 258 ~a~~l~~-----~~g~~~VvvT~G~~Ga~~~~~~~~~~~pa~~v---~vvDttGAGDaF~ag~l~~l~~g~~l~~al~~A 329 (352)
T 4e84_A 258 RVANLRA-----ELDIDALLLTRSEEGMTLFSAGGELHAPALAR---EVFDVSGAGDTVIATVATMLGAGVPLVDAVVLA 329 (352)
T ss_dssp HHHHHHH-----HHTCSEEEEECGGGCEEEEETTEEEEECCCCS---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHH-----HhCCCEEEEEcCCCcEEEEECCceEEecCCCc---CccCCccccHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 7777721 24788999999999999999999999998755 899999999999999999999999999999999
Q ss_pred HHHHhhhhhhccccCCCCCCC
Q 019402 320 CYAANVVIQRSGCTYPPKPEF 340 (341)
Q Consensus 320 ~~~aa~~v~~~g~~~p~~~e~ 340 (341)
+++|+++|++.|+..|+.+|+
T Consensus 330 ~aaaa~~v~~~Ga~~~t~~el 350 (352)
T 4e84_A 330 NRAAGIVVGKLGTATVDYDEL 350 (352)
T ss_dssp HHHHHHHHTSSSSCCCCHHHH
T ss_pred HHHHHHHhcCCCCccCCHHHh
Confidence 999999999999988877664
|
| >4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-44 Score=326.90 Aligned_cols=297 Identities=15% Similarity=0.145 Sum_probs=216.4
Q ss_pred CCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCce
Q 019402 2 AYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGAT 81 (341)
Q Consensus 2 ~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v 81 (341)
+||++|+++|++++|+...-+ .......+....+||.+.|+|.+|++ ||.++
T Consensus 22 ~mm~kv~~~GE~m~~l~p~~~-------------------------~~~~~~~~~~~~~GG~~aNvA~~lar---LG~~~ 73 (351)
T 4gm6_A 22 SMMKQVVTIGELLMRLSTQQG-------------------------IPFSQTTALDIHIGGAEANVAVNLSK---LGHPT 73 (351)
T ss_dssp ---CEEEEECCCEEEEECCTT-------------------------CCGGGCSEEEEEEECHHHHHHHHHHH---TTCCE
T ss_pred hccCCEEEEcceeEEecCCCC-------------------------CCccccCeEEEecCChHHHHHHHHHH---cCCCe
Confidence 477899999999999876432 12344567789999999999999998 45999
Q ss_pred EEEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEE-eCCeeceeecccccc---cCCcccCCCchhHhhhhc
Q 019402 82 SYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCV-VGGERSLVANLSAAN---CYKSEHLKRPEIWSIVEK 157 (341)
Q Consensus 82 ~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~-~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 157 (341)
.++|.+|+|.+|+++++.|+++||+++++...+..++.+++.. +++....+.+...+. .+...++. ..+.+++
T Consensus 74 ~~ig~vG~D~~G~~l~~~L~~~GVdt~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~d~~---~~~~~~~ 150 (351)
T 4gm6_A 74 RIATVVPANPIGKMAVEHLWRHQVDTAFVVEAGDRLGTYYLESGTALKAPSVVYDRQHSSFARHKSMDWD---LSELLKG 150 (351)
T ss_dssp EEEEEECSSHHHHHHHHHHHHTTEECTTEEECSSCCCEEEEECCBTTBCCEEEEECTTCHHHHCCCCCCC---HHHHHTT
T ss_pred EEEEEeCCCHHHHHHHHHHHHcCCCcccccccCCccceeEEEEccCCcceEEEEccccchhhhCCccccC---HHHHHhh
Confidence 9999999999999999999999999999865555555554444 343333333322221 22222222 3467889
Q ss_pred ceEEEEeccccccC---HHHHHHHHHHHHhcCCeEEEeCC--cHHHHh-hhhHHHHhhCCCCcEEEcCHHHHHHHHhhcC
Q 019402 158 AKYYYIAGFFLTVS---PESIQMVAEHAAAKNKVFMMNLS--APFICE-FFREPQEKALPYMDYVFGNETEARTFAKVHG 231 (341)
Q Consensus 158 ~~~v~i~~~~~~~~---~~~~~~~~~~~~~~~~~v~~d~~--~~~~~~-~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~ 231 (341)
++++|++++.+..+ .+.+.++++.++++|+++++|+. +..|.. ..++.+.++++++|++++|++|+..+++...
T Consensus 151 ~~~~~~~g~~l~~~~~~~~~~~~~~~~ak~~g~~v~~D~n~r~~lw~~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~ 230 (351)
T 4gm6_A 151 IRVLHVSGITIALSTFWLEMVVKIIREAKRNGIKISFDMNYRAKLWELEAAKRAYQQLLPLVDYCSAGQMDAVAFFEISS 230 (351)
T ss_dssp EEEEEEEHHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCT
T ss_pred cccceecccchhhchhHHHHHHHHHHHHHHcCCCcccCCCcCchhhhhhhHHHHHHHHHHhCCccccCHHHHHHHhCCCC
Confidence 99999998765443 37888999999999999999884 334432 2456788899999999999999999987543
Q ss_pred CCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCC--CCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcC
Q 019402 232 WETDNVEEIALKISQWPKASGTHKRITVITQGA--DPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE 309 (341)
Q Consensus 232 ~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~--~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g 309 (341)
...+..+...+.+.... ...+.+.++++.+. .|+.++..++.++++++++. +++|||||||+|+|||+++|++|
T Consensus 231 ~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~VvDttGAGDaF~ag~l~~l~~g 306 (351)
T 4gm6_A 231 ETTDYYQAMHDKYPNIE--LFYATKRTVISASHHLLQGHLWTQGECWESEEYAIY--PIVDRVGGGDAYTAAVLHGILSE 306 (351)
T ss_dssp TCSCHHHHHHHHCTTCC--EEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEC--SCSCCTTHHHHHHHHHHHHHHTT
T ss_pred chhHHHHHHHhhhhhhh--hhhccccceeeeccCCceEEEEeCCceEEeCCCCCC--CcCCCCChhHHHHHHHHHHHHCC
Confidence 32222233333321110 11223345555444 46677778888888776543 78999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhhhhhcccc
Q 019402 310 KPVEDCVRTGCYAANVVIQRSGCT 333 (341)
Q Consensus 310 ~~~~~a~~~A~~~aa~~v~~~g~~ 333 (341)
+++++|+++|+++|+++|++.|+.
T Consensus 307 ~~~~~al~~A~aaaal~v~~~Ga~ 330 (351)
T 4gm6_A 307 WRPDETVKFATAAAGLKHSIHGDI 330 (351)
T ss_dssp CCHHHHHHHHHHHHHHHTTSSSSS
T ss_pred CCHHHHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999999984
|
| >2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-43 Score=315.45 Aligned_cols=280 Identities=19% Similarity=0.250 Sum_probs=229.5
Q ss_pred cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEE
Q 019402 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~l 83 (341)
+++|+++|++++|++..++ ++|..++.....+....+||++.|+|.++++ +| .++.+
T Consensus 17 ~~~i~viG~~~iD~~~~~~--------------------~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~-LG--~~v~~ 73 (312)
T 2hlz_A 17 GSQILCVGLVVLDVISLVD--------------------KYPKEDSEIRCLSQRWQRGGNASNSCTILSL-LG--APCAF 73 (312)
T ss_dssp CCEEEEESCCEEEEEEEES--------------------SCCCTTCEEECSEEEEEEESHHHHHHHHHHH-HT--CCEEE
T ss_pred CCcEEEECcceEEEeeccc--------------------cCCCccceeecccceeccCccHHHHHHHHHH-cC--CceEE
Confidence 5689999999999999887 4666666666667788999999999999998 45 99999
Q ss_pred EEeecCCchhHHHHHHHHhcCCceeEeec-CCCCcceEEEEEe--CCeeceeecccccccCCcccCCCchhHhhhhcceE
Q 019402 84 IGCIGKDKFGEEMKKNSTAAGVNVKYYED-ESAPTGTCAVCVV--GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKY 160 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~~-~~~~t~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (341)
+|.+|+|.+|+.+++.|+++||+++++.. ++.+|+.++++++ +|+|+++.+.++...+++++++. ..+.++|+
T Consensus 74 ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~~~~~~~~~~~~~~----~~l~~~~~ 149 (312)
T 2hlz_A 74 MGSMAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDVSATDFEK----VDLTQFKW 149 (312)
T ss_dssp EEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCEEEEEEETTTCCEEEEEECCCCCCCCHHHHHT----SCGGGEEE
T ss_pred EEEecCchHHHHHHHHHHHcCCCCccceeccCCCCCeEEEEEECCCCceEEEecCCccccCCHHHhhH----hhhccCCE
Confidence 99999999999999999999999998854 3567888877775 58888877776666777766543 24678999
Q ss_pred EEEeccccccCHHHHHHHHHHHHhc--------CCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCC
Q 019402 161 YYIAGFFLTVSPESIQMVAEHAAAK--------NKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGW 232 (341)
Q Consensus 161 v~i~~~~~~~~~~~~~~~~~~~~~~--------~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~ 232 (341)
+|++++ .++....+++.+++. +.++++|+... ++.+.++++++|++++|++|++.+ +
T Consensus 150 v~~~~~----~~~~~~~~~~~a~~~~~~~~~~~~~~v~~d~~~~------~~~~~~~l~~~dil~~n~~ea~~l-g---- 214 (312)
T 2hlz_A 150 IHIEGR----NASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKP------REELFQLFGYGDVVFVSKDVAKHL-G---- 214 (312)
T ss_dssp EEEECS----SHHHHHHHHHHHHHHHTTSCGGGCCEEEEEECSC------CGGGGGGGGSSSEEEECHHHHHHT-T----
T ss_pred EEEecc----CHHHHHHHHHHHHHhcccccCCCCeEEEEEcccc------hHHHHHHHhcCCEEEEcHHHHHHc-C----
Confidence 999975 356677788888776 67899998643 234678899999999999999886 3
Q ss_pred CCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeC-CeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCC
Q 019402 233 ETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAED-GKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKP 311 (341)
Q Consensus 233 ~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~-~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~ 311 (341)
.++.+++++.+.++ ...| +.||||+|++|+++++. +..+++|+++ .++++|||||||+|+|+|+++|++|++
T Consensus 215 -~~~~~~~~~~l~~~---~~~g-~~vvvt~G~~G~~~~~~~~~~~~~~~~~--~~~vvdt~GAGDaf~a~~~~~l~~g~~ 287 (312)
T 2hlz_A 215 -FQSAEEALRGLYGR---VRKG-AVLVCAWAEEGADALGPDGKLLHSDAFP--PPRVVDTLGAGDTFNASVIFSLSQGRS 287 (312)
T ss_dssp -CCSHHHHHHHHGGG---SCTT-CEEEEECGGGCEEEECTTCCEEEECCCC--CSSCCCCTTHHHHHHHHHHHHHHTTCC
T ss_pred -CCCHHHHHHHHHHh---cCCC-CEEEEEecccCeEEEccCCCEEECCCCC--CCCcccCCCchHHHHHHHHHHHHcCCC
Confidence 34678888887543 1223 78999999999999874 5577888643 237899999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhccc
Q 019402 312 VEDCVRTGCYAANVVIQRSGC 332 (341)
Q Consensus 312 ~~~a~~~A~~~aa~~v~~~g~ 332 (341)
+++|+++|+++|+.+|++.|+
T Consensus 288 ~~~a~~~a~~~aa~~v~~~G~ 308 (312)
T 2hlz_A 288 VQEALRFGCQVAGKKCGLQGF 308 (312)
T ss_dssp HHHHHHHHHHHHHHHHTSSSS
T ss_pred HHHHHHHHHHHHHHHHhhcCc
Confidence 999999999999999999997
|
| >3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-43 Score=318.64 Aligned_cols=281 Identities=22% Similarity=0.271 Sum_probs=231.2
Q ss_pred ceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEE
Q 019402 5 GILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li 84 (341)
++|+++|++++|++...+ ++.....+....+||++.|+|.+|++ | |.++.++
T Consensus 2 ~~v~viG~~~iD~~~~~~-------------------------g~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~~~~i 53 (313)
T 3ewm_A 2 SLIASIGELLIDLISVEE-------------------------GDLKDVRLFEKHPGGAPANVAVGVSR-L--GVKSSLI 53 (313)
T ss_dssp CEEEEESCCEEEEEESSS-------------------------SCTTTCCEEEEEEECHHHHHHHHHHH-T--TCEEEEE
T ss_pred CcEEEECceeeeeecCCC-------------------------CCcccccceeecCCCHHHHHHHHHHH-C--CCCeEEE
Confidence 479999999999997543 23345667789999999999999998 4 5999999
Q ss_pred EeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEeCCeeceeeccc-ccccCCcccCCCchhHhhhhcceEEE
Q 019402 85 GCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVVGGERSLVANLS-AANCYKSEHLKRPEIWSIVEKAKYYY 162 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~ 162 (341)
|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++.+++|+++++.+.+ +...++++++.. +.+++++++|
T Consensus 54 g~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~g~~~~~~~~~~a~~~l~~~~~~~----~~l~~~~~~~ 129 (313)
T 3ewm_A 54 SKVGNDPFGEYLIEELSKENVDTRGIVKDEKKHTGIVFVQLKGASPSFLLYDDVAYFNMTLNDINW----DIVEEAKIVN 129 (313)
T ss_dssp EEEESSHHHHHHHHHHHHTTCBCTTEEEESSSCCEEEEEECSSSSCEEEECCSSGGGCCCGGGCCH----HHHHHCSEEE
T ss_pred EEeCCCHHHHHHHHHHHHcCCCccceeecCCCCceEEEEEecCCCcceEeeccCHHHhCChhhCCH----HHhCCCCEEE
Confidence 999999999999999999999999885 5677899998887778888877655 445777777763 5688999999
Q ss_pred Eecccc--ccCHHHHHHHHHHHHhcCCeEEEeCCcH--HHH---hhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCC
Q 019402 163 IAGFFL--TVSPESIQMVAEHAAAKNKVFMMNLSAP--FIC---EFFREPQEKALPYMDYVFGNETEARTFAKVHGWETD 235 (341)
Q Consensus 163 i~~~~~--~~~~~~~~~~~~~~~~~~~~v~~d~~~~--~~~---~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~ 235 (341)
++++.+ +.+.+.+.++++.++ .++++++|+... .|. ....+.+.++++++|++++|++|++.+.+...
T Consensus 130 ~~g~~~~~~~~~~~~~~~~~~a~-~~~~v~~Dp~~~~~~~~~~~~~~~~~~~~~l~~~di~~~N~~E~~~l~~~~~---- 204 (313)
T 3ewm_A 130 FGSVILARNPSRETVMKVIKKIK-GSSLIAFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLENQGV---- 204 (313)
T ss_dssp EESGGGGSTTHHHHHHHHHHHHB-TTBEEEEECCCCGGGGTTCHHHHHHHHHHHHHHCSEEEEEHHHHHHHHTTTC----
T ss_pred EcCcccCCcchHHHHHHHHHHhc-cCCEEEEeCCCChHHcCCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhccCc----
Confidence 999754 344578889999988 478899999642 222 12345677888999999999999998875210
Q ss_pred CHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHh--cCCCHH
Q 019402 236 NVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLV--QEKPVE 313 (341)
Q Consensus 236 ~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~--~g~~~~ 313 (341)
...+...||||+|++|++++++++.+++|++++ +++|||||||+|+|+|+++|+ +|++++
T Consensus 205 ---------------~~~~~~~vviT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaf~a~~~~~l~~~~g~~l~ 266 (313)
T 3ewm_A 205 ---------------EVKGSMLTAITLGPKGCRLIKNETVVDVPSYNV---NPLDTTGAGDAFMAALLVGILKLKGLDLL 266 (313)
T ss_dssp ---------------CCCCSSEEEEECGGGEEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHHSSSCCHH
T ss_pred ---------------cccCceEEEEEECCCCeEEEECCeeEEcCCCCc---ccCCCCCchHHHHHHHHHHHHhcCCCCHH
Confidence 112345689999999999999998889988765 899999999999999999999 999999
Q ss_pred HHHHHHHHHHhhhhhhccc-cCCCCCCC
Q 019402 314 DCVRTGCYAANVVIQRSGC-TYPPKPEF 340 (341)
Q Consensus 314 ~a~~~A~~~aa~~v~~~g~-~~p~~~e~ 340 (341)
+|+++|+++|+.+|++.|+ .+|+.+|+
T Consensus 267 ~a~~~A~~~aa~~v~~~G~~~~p~~~ev 294 (313)
T 3ewm_A 267 KLGKFANLVAALSTQKRGAWSTPRKDEL 294 (313)
T ss_dssp HHHHHHHHHHHHHTTSCSSCCCCCHHHH
T ss_pred HHHHHHHHHHHHHHccCCCCCCCCHHHH
Confidence 9999999999999999998 56776654
|
| >2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=328.22 Aligned_cols=293 Identities=15% Similarity=0.132 Sum_probs=232.3
Q ss_pred ceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhcc---CCceeecCchhHHHHHHHHHHhCCCCce
Q 019402 5 GILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASK---ENVEYIAGGATQNSIKVAQWMLQIPGAT 81 (341)
Q Consensus 5 ~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~---~~~~~~~GG~~~n~a~~l~~l~~lg~~v 81 (341)
+.|+|+|++++|++..++ + |.+++.... .+....+||++.|+|.++++ | |.++
T Consensus 13 ~~~~v~G~~~vD~~~~~~--------------------~-~~~g~~~~~s~~~~~~~~~GG~~~NvA~~la~-L--G~~~ 68 (331)
T 2ajr_A 13 MVLTVTLNPALDREIFIE--------------------D-FQVNRLYRINDLSKTQMSPGGKGINVSIALSK-L--GVPS 68 (331)
T ss_dssp CEEEEESSCEEEEEEECT--------------------T-CCSSCEEECCSGGGEEEEEESHHHHHHHHHHH-T--TCCE
T ss_pred eEEEEecchHHeEEEEcC--------------------C-ccCCceEEeccccceEEecCcHHHHHHHHHHH-c--CCCe
Confidence 489999999999999997 3 556666666 78889999999999999998 4 5999
Q ss_pred EEEEeecCCchhHHHHHHHHhcC--CceeEeecCCCCcceEEEEEe-CCee-ceeecccccccCCcccCCCc--hhHhhh
Q 019402 82 SYIGCIGKDKFGEEMKKNSTAAG--VNVKYYEDESAPTGTCAVCVV-GGER-SLVANLSAANCYKSEHLKRP--EIWSIV 155 (341)
Q Consensus 82 ~li~~vG~D~~g~~i~~~l~~~g--i~~~~~~~~~~~t~~~~~~~~-~g~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~ 155 (341)
.++|.+|+| +|+++++.|++.| |+++++...+ +|+.++++++ +|++ +.+...++ .++++++... ...+.+
T Consensus 69 ~~~~~vG~d-~G~~i~~~L~~~g~~V~~~~v~~~~-~t~~~~~~v~~~g~~~~~~~~~g~--~l~~~~~~~~~~~~~~~~ 144 (331)
T 2ajr_A 69 VATGFVGGY-MGKILVEELRKISKLITTNFVYVEG-ETRENIEIIDEKNKTITAINFPGP--DVTDMDVNHFLRRYKMTL 144 (331)
T ss_dssp EEEEEEEHH-HHHHHHHHHHHHCTTEEEEEEEESS-CCEEEEEEEETTTTEEEEEECCCC--CCCHHHHHHHHHHHHHHH
T ss_pred EEEEEecCc-hHHHHHHHHHHcCCccceEEEEcCC-CCeEEEEEEeCCCceEEEEeCCCC--CCCHHHHHHHHHHHHHhc
Confidence 999999998 9999999999999 9999986544 4788877777 5777 44444443 3555444320 012356
Q ss_pred hcceEEEEecccc-ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHH-HHHHHhhcCCC
Q 019402 156 EKAKYYYIAGFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETE-ARTFAKVHGWE 233 (341)
Q Consensus 156 ~~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E-~~~l~~~~~~~ 233 (341)
.++|++|+++..+ ..+.+.+..+++.+++.++++++|+.... ..+.+... +++|++++|++| ++.+++....+
T Consensus 145 ~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~----~~~~l~~~-~~~dil~~N~~E~~~~l~g~~~~~ 219 (331)
T 2ajr_A 145 SKVDCVVISGSIPPGVNEGICNELVRLARERGVFVFVEQTPRL----LERIYEGP-EFPNVVKPDLRGNHASFLGVDLKT 219 (331)
T ss_dssp TTCSEEEEESCCCTTSCTTHHHHHHHHHHHTTCEEEEECCHHH----HHHHHHSS-CCCSEECCCCTTCCSCBTTBCCCS
T ss_pred ccCCEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECChHH----HHHHHhcC-CCCeEEEeCccchHHHHhCCCCCC
Confidence 7899999987643 34457899999999999999999997532 12222221 459999999999 99887643322
Q ss_pred CCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEe-cccCCCCcccCCCCcchhhHHHHHHHHh-cCCC
Q 019402 234 TDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFP-VILLPKEKLVDTNGAGDAFVGGFLSQLV-QEKP 311 (341)
Q Consensus 234 ~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~-~~~~~~~~vvdttGAGDaf~a~~~~~l~-~g~~ 311 (341)
.++++++++.+ ... ++.||||+|++|++++++++.+++| ++++ +++|||||||+|+|||+++|+ +|++
T Consensus 220 ~~~~~~~~~~l------~~~-~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~l~~l~~~g~~ 289 (331)
T 2ajr_A 220 FDDYVKLAEKL------AEK-SQVSVVSYEVKNDIVATREGVWLIRSKEEI---DTSHLLGAGDAYVAGMVYYFIKHGAN 289 (331)
T ss_dssp HHHHHHHHHHH------HHH-SSEEEEEETTTEEEEECSSCEEEEEESSCC---CGGGCTTHHHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHH------HHh-cCEEEEeecCCceEEEeCCcEEEEecCCcc---cccCCCchHHHHHHHHHHHHHHcCCC
Confidence 23455677777 344 7889999999999999888788888 7654 899999999999999999999 9999
Q ss_pred HHHHHHHHHHHHhhhhhhccccCCCCCCC
Q 019402 312 VEDCVRTGCYAANVVIQRSGCTYPPKPEF 340 (341)
Q Consensus 312 ~~~a~~~A~~~aa~~v~~~g~~~p~~~e~ 340 (341)
+++|+++|+++|+.++++.|+.+|+.+|+
T Consensus 290 ~~~al~~A~a~aa~~v~~~G~~~~~~~ev 318 (331)
T 2ajr_A 290 FLEMAKFGFASALAATRRKEKYMPDLEAI 318 (331)
T ss_dssp HHHHHHHHHHHHHHHTTSSSCCCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHcCcCcCCCCHHHH
Confidence 99999999999999999999988876553
|
| >3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=315.08 Aligned_cols=292 Identities=16% Similarity=0.219 Sum_probs=231.0
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
+|+|+|++++|++..++++|++.+ ...++|..++..........+||++.|+|.+|++ + |.++.++|
T Consensus 2 ~i~v~G~~~iD~~~~~~~~~~~~~----------~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~~~~i~ 68 (326)
T 3b1n_A 2 ATLICGSIAYDNIMTFEGRFREHI----------LPDQVHLINLSFLVPTMRREFGGCAGNIAYALNL-L--GGDARMMG 68 (326)
T ss_dssp CEEEESCCEEEEEEECSSCGGGGC----------CTTSSSSCEEEEECCSCCCEEECHHHHHHHHHHH-T--TCCEEEEE
T ss_pred cEEEECcceEEEEEecchhhhhhc----------cccccCCCCcceecccceeccCCHHHHHHHHHHH-c--CCCeeEEE
Confidence 799999999999998843332221 1124566666666677888999999999999998 4 59999999
Q ss_pred eecC-CchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcceEEE
Q 019402 86 CIGK-DKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYY 162 (341)
Q Consensus 86 ~vG~-D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 162 (341)
.+|+ | +|+ +++.|++.||+++++. ..+.+|+.+++.++ +|++.+..+.+++..++++++.. . .++|+++
T Consensus 69 ~vG~~D-~g~-i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~~~~~~~~~-----~-~~~~~v~ 140 (326)
T 3b1n_A 69 TLGAVD-AQP-YLDRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFHPGAMMQSHVNHAGE-----A-KDIKLAI 140 (326)
T ss_dssp EEETTT-CHH-HHHHHHHHTCEEEEEEEETTCCCEEEEEEECTTCCCEEEEECGGGGGGGGSCGGG-----C-CSCSEEE
T ss_pred EECCcC-HHH-HHHHHHHcCCcccceEEcCCCCceEEEEEECCCCceEEEEecChhhhcChhhccc-----c-cCCCEEE
Confidence 9999 9 899 9999999999999985 56678999998887 47776655666655555555432 2 7899999
Q ss_pred EeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHH
Q 019402 163 IAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIAL 242 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~ 242 (341)
+++. .++.+.++++.+++.+.++++|+.... .....+.+.++++++|++++|++|++.+++.... +.++
T Consensus 141 ~~~~----~~~~~~~~~~~a~~~g~~v~~D~~~~~-~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~---~~~~--- 209 (326)
T 3b1n_A 141 VGPD----GFQGMVQHTEELAQAGVPFIFDPGQGL-PLFDGATLRRSIELATYIAVNDYEAKLVCDKTGW---SEDE--- 209 (326)
T ss_dssp ECSC----CHHHHHHHHHHHHHHTCCEEECCGGGG-GGCCHHHHHHHHHHCSEEEEEHHHHHHHHHHHCC---CHHH---
T ss_pred ECCc----cHHHHHHHHHHHHHCCCEEEEeCchhh-hhccHHHHHHHHHhCCEEecCHHHHHHHhCCCCC---CHHH---
Confidence 9753 357888999999999999999996422 1112345678889999999999999999875422 2332
Q ss_pred HHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHHH
Q 019402 243 KISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYA 322 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~ 322 (341)
+. . +++.||||+|++|++++++++.+++|+++++ .++|||||||+|+|||+++|++|+++++|+++|+++
T Consensus 210 -l~------~-~~~~vvvT~G~~Ga~~~~~~~~~~~~~~~v~--~vvDttGAGDaF~ag~l~~l~~g~~~~~a~~~A~~~ 279 (326)
T 3b1n_A 210 -IA------S-RVQALIITRGEHGATIRHRDGTEQIPAVRAE--RVIDPTGCGDAFRGGLLYGIEHGFDWATAGRLASLM 279 (326)
T ss_dssp -HH------T-TSSEEEEECGGGCEEEEETTEEEEECCCCCS--CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred -HH------h-cCCEEEEecCCCceEEEECCcEEEeCCCCCC--CCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 31 2 2678999999999999988888888877652 378999999999999999999999999999999999
Q ss_pred Hhhhhhhcccc--CCCCCC
Q 019402 323 ANVVIQRSGCT--YPPKPE 339 (341)
Q Consensus 323 aa~~v~~~g~~--~p~~~e 339 (341)
|+.++++.|+. +|+.+|
T Consensus 280 aa~~v~~~G~~~~~~~~~e 298 (326)
T 3b1n_A 280 GALKIAHQGPQTYAPTRAE 298 (326)
T ss_dssp HHHHHTSSSTTCCCCCHHH
T ss_pred HHHHHcCCCCCCCCCCHHH
Confidence 99999999984 566554
|
| >2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-43 Score=316.94 Aligned_cols=297 Identities=20% Similarity=0.214 Sum_probs=233.7
Q ss_pred ceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEE
Q 019402 5 GILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li 84 (341)
++|+++|++++|++..++++|++.+ ...+.|..++..........+||++.|+|.++++ + |.++.++
T Consensus 11 m~i~v~G~~~~D~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~~~~i 77 (334)
T 2pkf_A 11 MTIAVTGSIATDHLMRFPGRFSEQL----------LPEHLHKVSLSFLVDDLVMHRGGVAGNMAFAIGV-L--GGEVALV 77 (334)
T ss_dssp SEEEEESCCEEEEEEECSSCTHHHH----------TTSCGGGCCCCCCCSEEEEEEECHHHHHHHHHHH-T--TCEEEEE
T ss_pred CeEEEECChhheEEEecChHHhhhh----------chhhccccccccccccceecCCChHHHHHHHHHH-c--CCCeEEE
Confidence 4899999999999998843333322 0114566666556677888999999999999998 4 5999999
Q ss_pred EeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcceEEE
Q 019402 85 GCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYY 162 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 162 (341)
|.+|+| +|+ +++.|++.||+++++. ..+.+|+.+++.++ +|++.+..+.+++..++++++.. ....++++|++|
T Consensus 78 ~~vG~D-~g~-i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~--~~~~l~~~~~v~ 153 (334)
T 2pkf_A 78 GAAGAD-FAD-YRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYPGAMSEARNIKLAD--VVSAIGKPELVI 153 (334)
T ss_dssp CEECGG-GHH-HHHHHHTTTEECTTCEECSSCCCEEEEEEECTTCCEEEEEECGGGGGGGGCCHHH--HHHHHCSCSEEE
T ss_pred EEEeCc-hHH-HHHHHHHCCCceeeeEecCCCCceEEEEEEcCCCCEEEEECCchhhhCCHhhcCh--hhhhhcCCCEEE
Confidence 999999 999 9999999999999885 45678999988887 57777766666665665554432 112357899999
Q ss_pred EeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHH
Q 019402 163 IAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIAL 242 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~ 242 (341)
+++. .++.+.++++.+++.+.++++|+.... .....+.+.++++++|++++|++|++.+++.... +.++
T Consensus 154 ~~~~----~~~~~~~~~~~a~~~g~~v~~D~~~~~-~~~~~~~l~~~l~~~dil~~N~~E~~~l~g~~~~---~~~~--- 222 (334)
T 2pkf_A 154 IGAN----DPEAMFLHTEECRKLGLAFAADPSQQL-ARLSGEEIRRLVNGAAYLFTNDYEWDLLLSKTGW---SEAD--- 222 (334)
T ss_dssp EESC----CHHHHHHHHHHHHHHTCCEEEECGGGG-GTSCHHHHHTTTTTCSEEEEEHHHHHHHHHHHCC---CHHH---
T ss_pred EcCC----ChHHHHHHHHHHHhcCCeEEEeccchh-hhhhHHHHHHHHhcCCEEecCHHHHHHHhccCCC---CHHH---
Confidence 9864 357888999999999999999996422 1112345778999999999999999999875422 2332
Q ss_pred HHhcCCCCCCCCccEEEEeeCCCCEEEEeCCe-EEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHH
Q 019402 243 KISQWPKASGTHKRITVITQGADPVVVAEDGK-VKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCY 321 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~-~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~ 321 (341)
+ ... ++.||||+|++|++++++++ .+++|+++++ .++|||||||+|+|||+++|++|+++++|+++|++
T Consensus 223 -l------~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~--~vvDttGAGDaF~a~~~~~l~~g~~~~~a~~~A~~ 292 (334)
T 2pkf_A 223 -V------MAQ-IDLRVTTLGPKGVDLVEPDGTTIHVGVVPET--SQTDPTGVGDAFRAGFLTGRSAGLGLERSAQLGSL 292 (334)
T ss_dssp -H------HTT-CSCEEEECGGGCEEEECTTSCEEEECCCCCS--CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred -H------Hhc-CCEEEEEeCCCCeEEEeCCCcEEEeCCcCCC--CCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 3 122 67899999999999998777 8888877652 37899999999999999999999999999999999
Q ss_pred HHhhhhhhcccc--CCCCCC
Q 019402 322 AANVVIQRSGCT--YPPKPE 339 (341)
Q Consensus 322 ~aa~~v~~~g~~--~p~~~e 339 (341)
+|+.++++.|+. +|+.+|
T Consensus 293 ~aa~~v~~~G~~~~~p~~~e 312 (334)
T 2pkf_A 293 VAVLVLESTGTQEWQWDYEA 312 (334)
T ss_dssp HHHHHHTSSSSSCCCCCHHH
T ss_pred HHHHHHhCCCCCcCCCCHHH
Confidence 999999999984 566554
|
| >2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-43 Score=313.77 Aligned_cols=286 Identities=18% Similarity=0.200 Sum_probs=229.4
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
-+++.|++++|++..++ ++ .+++.....+....+||++.|+|.++++ | |.++.++|
T Consensus 2 i~tv~~n~~~D~~~~~~--------------------~~-~~g~~~~~~~~~~~~GG~~~N~A~~la~-L--G~~~~~~~ 57 (306)
T 2abq_A 2 IYTVTLNPSIDYIVQVE--------------------NF-QQGVVNRSERDRKQPGGKGINVSRVLKR-L--GHETKALG 57 (306)
T ss_dssp EEEEESSCEEEEEEECT--------------------TC-CSSSEEECSEEEEEEECHHHHHHHHHHH-T--TCCCEEEE
T ss_pred EEEEecCchheEEEEcC--------------------Cc-ccCCeEEeceeEecCCchHHHHHHHHHH-c--CCCceEEE
Confidence 57899999999999998 32 4556666677889999999999999998 4 59999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCCc-hhHhhhhcceEEEEe
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRP-EIWSIVEKAKYYYIA 164 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~ 164 (341)
.+|+ .+|+.+++.|++.||+++++...+ +|+.++.+ .+|+++.+...+ ..++++++... +.+..++++|++|++
T Consensus 58 ~vG~-~~g~~i~~~L~~~gv~~~~v~~~~-~t~~~~~~-~~g~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~v~~~ 132 (306)
T 2abq_A 58 FLGG-FTGAYVRNALEKEEIGLSFIEVEG-DTRINVKI-KGKQETELNGTA--PLIKKEHVQALLEQLTELEKGDVLVLA 132 (306)
T ss_dssp EEEH-HHHHHHHHHHHHTTCEECCEEESS-CCEEEEEE-ESSSCEEEBCCC--CCCCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred Eecc-hhHHHHHHHHHHcCCceEEEEcCC-CCceEEEE-eCCceEEEECCC--CCCCHHHHHHHHHHHHhccCCCEEEEe
Confidence 9998 799999999999999999986443 47777665 778776544433 24555444320 011115789999998
Q ss_pred cccc-ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCC-CCcEEEcCHHHHHHHHhhcCCCCCCHHHHHH
Q 019402 165 GFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP-YMDYVFGNETEARTFAKVHGWETDNVEEIAL 242 (341)
Q Consensus 165 ~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~-~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~ 242 (341)
++.. ..+.+.+.++++.+++++.++++|+.+. .+.++++ ++|++++|++|+..+++....+.++..++++
T Consensus 133 g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~--------~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~ 204 (306)
T 2abq_A 133 GSVPQAMPQTIYRSMTQIAKERGAFVAVDTSGE--------ALHEVLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQ 204 (306)
T ss_dssp SCCCTTSCTTHHHHHHHHHHTTTCEEEEECCHH--------HHHHHGGGCCSEECCBHHHHHHHHTSCCCSHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHHHhcCCEEEEECChH--------HHHHHHhcCCcEEecCHHHHHHHhCCCCCCHHHHHHHHH
Confidence 8653 3456889999999999999999999743 2567788 9999999999999998754333345566777
Q ss_pred HHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHHH
Q 019402 243 KISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYA 322 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~ 322 (341)
.+ ...|++.||||+|++|++++.+++.+++|++++ +++|||||||+|+|||+++|++|+++++|+++|+++
T Consensus 205 ~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~a~~~~~l~~g~~~~~a~~~A~a~ 275 (306)
T 2abq_A 205 RL------IGEGIESILVSFAGDGALFASAEGMFHVNVPSG---EVRNSVGAGDSVVAGFLAALQEGKSLEDAVPFAVAA 275 (306)
T ss_dssp HH------HHTTCCEEEEECGGGCEEEEETTEEEEECCCCC---CCCCCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HH------HHcCCCEEEEecCCCceEEEeCCCEEEEeCCCc---cccCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 77 455788999999999999998888888887654 889999999999999999999999999999999999
Q ss_pred HhhhhhhccccCCCCCC
Q 019402 323 ANVVIQRSGCTYPPKPE 339 (341)
Q Consensus 323 aa~~v~~~g~~~p~~~e 339 (341)
|+.++++. .+|+.+|
T Consensus 276 aa~~v~~~--~~p~~~e 290 (306)
T 2abq_A 276 GSATAFSD--GFCTREE 290 (306)
T ss_dssp HHHHHHSS--SCCCHHH
T ss_pred HHHHhcCc--CCCCHHH
Confidence 99999998 5666554
|
| >2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-43 Score=313.44 Aligned_cols=285 Identities=14% Similarity=0.167 Sum_probs=230.1
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
-+++.|++++|++..++ + |.+++.....+....+||++.|+|.++++ + |.++.++|
T Consensus 2 i~tvt~n~~~D~~~~~~--------------------~-~~~g~~~~~~~~~~~~GG~~~N~A~~la~-L--G~~~~~~~ 57 (306)
T 2jg5_A 2 IYTVTFNPSIDYVIFTN--------------------D-FKIDGLNRATATYKFAGGKGINVSRVLKT-L--DVESTALG 57 (306)
T ss_dssp EEEEESSCEEEEEEECS--------------------S-CCTTSEEECSEEEEEEESHHHHHHHHHHH-T--TCCCEEEE
T ss_pred EEEEecCceEEEEEEcC--------------------C-cccCceEEeceeEecCCchHHHHHHHHHH-c--CCCeeEEE
Confidence 58899999999999987 3 45677777778899999999999999998 4 59999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCCchhHhh---hhcceEEE
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSI---VEKAKYYY 162 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~ 162 (341)
.+|+ .+|+.+++.|++.||+++++...+ +|+.++.+ .+|+++.+...++ .+++++++. ..+. ++++|++|
T Consensus 58 ~vG~-~~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~-~~g~~~~~~~~g~--~~~~~~~~~--~~~~~~~~~~~~~v~ 130 (306)
T 2jg5_A 58 FAGG-FPGKFIIDTLNNSAIQSNFIEVDE-DTRINVKL-KTGQETEINAPGP--HITSTQFEQ--LLQQIKNTTSEDIVI 130 (306)
T ss_dssp EECH-HHHHHHHHHHHHTTCEECCEECSS-CCEEEEEE-ESSSEEEEECCCC--CCCHHHHHH--HHHHHTTCCTTCEEE
T ss_pred EecC-cchHHHHHHHHHCCCceeEEEcCC-CCeEEEEE-cCCCEEEEECCCC--CCCHHHHHH--HHHHHHhccCCCEEE
Confidence 9999 699999999999999999986543 47777655 7787765554443 344444332 1111 56799999
Q ss_pred Eecccc-ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCC-CCcEEEcCHHHHHHHHhhcCCCCCCHHHH
Q 019402 163 IAGFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP-YMDYVFGNETEARTFAKVHGWETDNVEEI 240 (341)
Q Consensus 163 i~~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~-~~dil~~n~~E~~~l~~~~~~~~~~~~~~ 240 (341)
+++... ..+.+.+..+++.+++.+.++++|+.+.. +.++++ ++|++++|++|++.+++....+.+++.++
T Consensus 131 ~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~--------~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~ 202 (306)
T 2jg5_A 131 VAGSVPSSIPSDAYAQIAQITAQTGAKLVVDAEKEL--------AESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKY 202 (306)
T ss_dssp EESCCCTTSCTTHHHHHHHHHHHHCCEEEEECCHHH--------HHHHGGGCCSEECCBHHHHHHHTTSCCCSHHHHHHH
T ss_pred EeCCCCCCCChHHHHHHHHHHHHCCCEEEEECChHH--------HHHHHhcCCeEEecCHHHHHHHhCCCCCCHHHHHHH
Confidence 987643 33457889999999999999999997432 455666 69999999999999987533222345667
Q ss_pred HHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHH
Q 019402 241 ALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGC 320 (341)
Q Consensus 241 ~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~ 320 (341)
++.+ ...|++.|+||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|+++|+
T Consensus 203 ~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~ 273 (306)
T 2jg5_A 203 GRLL------VDKGAQSVIVSLGGDGAIYIDKEISIKAVNPQG---KVVNTVGSGDSTVAGMVAGIASGLSIEKAFQQAV 273 (306)
T ss_dssp HHHH------HHTTCSCEEEECGGGCEEEECSSEEEEEECCCC---CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHH------HHcCCCEEEEccCCCceEEEeCCcEEEEeCCcc---cccCCcChHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 7777 455788999999999999998888888887655 7899999999999999999999999999999999
Q ss_pred HHHhhhhhhccccCCCCCCC
Q 019402 321 YAANVVIQRSGCTYPPKPEF 340 (341)
Q Consensus 321 ~~aa~~v~~~g~~~p~~~e~ 340 (341)
++|+.++++.| +|+.+|+
T Consensus 274 a~aa~~v~~~G--~~~~~ev 291 (306)
T 2jg5_A 274 ACGTATAFDED--LATRDAI 291 (306)
T ss_dssp HHHHHHHTSSS--SCCHHHH
T ss_pred HHHHHHHcCCC--CCCHHHH
Confidence 99999999999 7776553
|
| >3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-42 Score=308.22 Aligned_cols=278 Identities=21% Similarity=0.257 Sum_probs=220.2
Q ss_pred CCCcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCC-
Q 019402 1 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPG- 79 (341)
Q Consensus 1 m~~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~- 79 (341)
|+| +|+|+|++++|++.... .+....+||++.|+|.++++ ||.
T Consensus 1 M~~--~ilviG~~~iD~~~~~~-------------------------------~~~~~~~GG~~~NvA~~la~---LG~~ 44 (313)
T 3kd6_A 1 MSL--SLLVIGSLAFDDIETPF-------------------------------GRSDNTLGGSSTYIALSASY---FTDE 44 (313)
T ss_dssp --C--CEEEESCCEEEEEECSS-------------------------------CEEEEEEECHHHHHHHHHTT---TCSS
T ss_pred CCc--cEEEEeEEEEeeecCCC-------------------------------CcccccCCCHHHHHHHHHHH---hCCC
Confidence 554 89999999999996332 23468999999999999997 459
Q ss_pred ceEEEEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEE--e-CCeeceeecccccccCCcccCCCchhHhhh
Q 019402 80 ATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCV--V-GGERSLVANLSAANCYKSEHLKRPEIWSIV 155 (341)
Q Consensus 80 ~v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~--~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (341)
++.++|.+|+| +|+.+++.|+++||+++++. ..+.+|....-.. + ++++.+....+....+.+. + .+.+
T Consensus 45 ~~~~ig~vG~D-~g~~~~~~L~~~gVd~~~v~~~~~~~T~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~ 117 (313)
T 3kd6_A 45 PIRMVGVVGSD-FGKEHFDLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLDTQLNVFAEFDPH-V-----PQYY 117 (313)
T ss_dssp CEEEEEEEETT-SCHHHHHHHHHTTEEEEEEEEETTCCCEEEEEEECTTSSCEEEEEEECGGGTTCCCC-C-----CGGG
T ss_pred ceEEEEecCCC-cHHHHHHHHHHcCCCccceEEcCCCCeeeeeeeeeccccccceeecccchHhhcCcc-c-----hHHH
Confidence 99999999999 99999999999999999985 4445553221111 1 2344443334443444432 1 2457
Q ss_pred hcceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCC
Q 019402 156 EKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETD 235 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~ 235 (341)
+++|++++++ ++++....+++.+ +.+.++++|+. ..|.....+.+.++++++|++++|++|++.|++ .+
T Consensus 118 ~~~~~v~~~~----~~~~~~~~~~~~~-~~~~~v~~Dp~-~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g-----~~ 186 (313)
T 3kd6_A 118 RDSKFVCLGN----IDPELQLKVLDQI-DDPKLVVCDTM-NFWIEGKPEELKKVLARVDVFIVNDSEARLLSG-----DP 186 (313)
T ss_dssp TTCSEEEECS----SCHHHHHHHHTTC-SSCSEEEEECC-HHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHS-----CS
T ss_pred ccCCEEEEcC----CCHHHHHHHHHHH-hhCCEEEEcCh-hhhhhhhHHHHHHHHhcCCEEEeCHHHHHHHhC-----CC
Confidence 8999999964 4566677777777 57788999994 455555566788899999999999999999987 45
Q ss_pred CHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCC-----
Q 019402 236 NVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEK----- 310 (341)
Q Consensus 236 ~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~----- 310 (341)
+.+++++.+ .+.|++.||||+|++|++++++++.+++|++++. +++|||||||+|+|||+++|++|+
T Consensus 187 ~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~--~vvdttGAGDaf~a~~~~~l~~g~~~~~~ 258 (313)
T 3kd6_A 187 NLVKTARII------REMGPKTLIIKKGEHGALLFTDNGIFAAPAFPLE--SIYDPTGAGDTFAGGFIGHLARCGNTSEA 258 (313)
T ss_dssp CHHHHHHHH------HTTSCSEEEEECTTSCEEEEETTEEEEECCCTTC--CCSCCTTHHHHHHHHHHHHHHHHCCCCHH
T ss_pred CHHHHHHHH------HHcCCCEEEEeeCCCcEEEEECCceEEeCCCCCC--CcCCCCCccHHHHHHHHHHHHcCCCcccc
Confidence 788899999 5678899999999999999999998898877542 689999999999999999999998
Q ss_pred CHHHHHHHHHHHHhhhhhhcccc---CCCCCCC
Q 019402 311 PVEDCVRTGCYAANVVIQRSGCT---YPPKPEF 340 (341)
Q Consensus 311 ~~~~a~~~A~~~aa~~v~~~g~~---~p~~~e~ 340 (341)
++++|+++|+++|+.+|++.|+. .|+++|+
T Consensus 259 ~l~~a~~~a~~~aa~~v~~~G~~~~~~~~~~ev 291 (313)
T 3kd6_A 259 EMRKAVLYGSAMASFCVEQFGPYRYNDLDLLEV 291 (313)
T ss_dssp HHHHHHHHHHHHHHHHTTSSTTGGGGTCCHHHH
T ss_pred CHHHHHHHHHHHHHHHHeecCCCCCCCCCHHHH
Confidence 89999999999999999999995 4666553
|
| >2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=309.22 Aligned_cols=276 Identities=18% Similarity=0.247 Sum_probs=219.7
Q ss_pred cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEE
Q 019402 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~l 83 (341)
+++|+++|++++|++. . ...+||++.|+|.++++ + |.++.+
T Consensus 3 ~~~v~viG~~~~D~~p-----------------------~-------------~~~~GG~~~N~A~~la~-L--G~~~~~ 43 (296)
T 2qhp_A 3 NNIIVGMGEALWDVLP-----------------------E-------------GKKIGGAPANFAYHVSQ-F--GFDSRV 43 (296)
T ss_dssp CCEEEEESCCEEEEET-----------------------T-------------EEEEECHHHHHHHHHHH-T--TCEEEE
T ss_pred cceEEEEchhheEecC-----------------------C-------------CCCCCCHHHHHHHHHHH-c--CCCeeE
Confidence 4489999999999972 1 26899999999999998 4 599999
Q ss_pred EEeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecccc-cccCCcccCCCchhHhhhhcceE
Q 019402 84 IGCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSA-ANCYKSEHLKRPEIWSIVEKAKY 160 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 160 (341)
+|.+|+|.+|+.+++.|++.|| +++. ..+.+|+.+++.++ +|+|++....+. ...+++. ....+.++++|+
T Consensus 44 ~~~vG~D~~g~~~~~~l~~~gv--~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~ 117 (296)
T 2qhp_A 44 VSAVGNDELGDEIMEVFKEKQL--KNQIERVDYPTGTVQVTLDDEGVPCYEIKEGVAWDNIPFT----DELKRLALNTRA 117 (296)
T ss_dssp EEEEESSHHHHHHHHHHHHTTC--CEEEEEESSCCEEEEEC------CCEEECSSCGGGCCCCC----HHHHHHHHTEEE
T ss_pred EEEeCCChHHHHHHHHHHHcCC--CEEeecCCCCceEEEEEECCCCCEEEEEecCChhhhCCcc----hhhHhhhcCCCE
Confidence 9999999999999999999999 6664 44678999888776 688776555443 2333322 123356789999
Q ss_pred EEEecccc--ccCHHHHHHHHHHHHh-cCCeEEEeCCc--HHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCC
Q 019402 161 YYIAGFFL--TVSPESIQMVAEHAAA-KNKVFMMNLSA--PFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETD 235 (341)
Q Consensus 161 v~i~~~~~--~~~~~~~~~~~~~~~~-~~~~v~~d~~~--~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~ 235 (341)
+|++++.. +.+.+.+..+++.+++ .+.++++|+.. ..| ..+.+.++++++|++++|++|++.+++....+.+
T Consensus 118 v~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~v~~D~~~~~~~~---~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~ 194 (296)
T 2qhp_A 118 VCFGSLAQRNEVSRATINRFLDTMPDIDGQLKIFDINLRQDFY---TKEVLRESFKRCNILKINDEELVTISRMFGYPGI 194 (296)
T ss_dssp EEECSGGGSSHHHHHHHHHHHHHSCCTTSCEEEEECCCCTTCC---CHHHHHHHHHHCSEEEEEHHHHHHHHHHTTCTTS
T ss_pred EEECChHhcChHHHHHHHHHHHHHHhcCCCEEEEECcCCcccc---CHHHHHHHHHHCCEEECCHHHHHHHhcccCCCCC
Confidence 99987543 2245678888888877 68899999843 122 2345677888999999999999999987655556
Q ss_pred CHHHHHHHHhcCCCCCC-CCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHH
Q 019402 236 NVEEIALKISQWPKASG-THKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVED 314 (341)
Q Consensus 236 ~~~~~~~~l~~~~~~~~-~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~ 314 (341)
+++++++.+ .. .|++.||||+|++|++++++++.+++|++++ +++|||||||+|+|+|+++|++|+++++
T Consensus 195 ~~~~~~~~l------~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vdttGAGD~f~a~~~~~l~~g~~~~~ 265 (296)
T 2qhp_A 195 DLQDKCWIL------LAKYNLKMLILTCGINGSYVFTPGVVSFQETPKV---PVADTVGAGDSFTAAFCASILNGKSVPE 265 (296)
T ss_dssp CHHHHHHHH------HHHTTCSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHHTCCHHH
T ss_pred CHHHHHHHH------HHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCC---ccccCCCchHHHHHHHHHHHHcCCCHHH
Confidence 788888888 33 3788999999999999998888888887755 7899999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhccccCCC
Q 019402 315 CVRTGCYAANVVIQRSGCTYPP 336 (341)
Q Consensus 315 a~~~A~~~aa~~v~~~g~~~p~ 336 (341)
|+++|+++|+.++++.|+..+.
T Consensus 266 a~~~a~~~aa~~v~~~G~~~~~ 287 (296)
T 2qhp_A 266 AHKLAVEVSAYVCTQSGAMPEL 287 (296)
T ss_dssp HHHHHHHHHHHHHTSSSSSCCC
T ss_pred HHHHHHHHHHHHHcCCCCCCCC
Confidence 9999999999999999996443
|
| >3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-42 Score=311.23 Aligned_cols=270 Identities=20% Similarity=0.228 Sum_probs=220.8
Q ss_pred CcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceE
Q 019402 3 YEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATS 82 (341)
Q Consensus 3 ~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~ 82 (341)
++++|+++|++++|++..++ ++| +++..........+||++.|+|.++++ + |.++.
T Consensus 19 ~~~~v~viG~~~iD~~~~~~--------------------~~p-~g~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~~~ 74 (306)
T 3bf5_A 19 GMRFLAYFGHLNIDVLISVD--------------------SIP-REGSVNVKDLRPRFGGTAGNFAIVAQK-F--RIPFD 74 (306)
T ss_dssp CCEEEEEECCCEEEEEEECS--------------------CCC-SSEEEECSEEEEEEEHHHHHHHHHHHH-T--TCCCE
T ss_pred CCCcEEEECCceEEEEEecC--------------------CCC-CCceEECcceEecCCChHHHHHHHHHH-c--CCCeE
Confidence 35689999999999999887 466 566666677788999999999999998 4 59999
Q ss_pred EEEeecCCchhHHHHHHHHhcCCceeEe-ecCCCCcceEEEEEeCCeeceeecccccccCCcccCCCchhHhhhhcceEE
Q 019402 83 YIGCIGKDKFGEEMKKNSTAAGVNVKYY-EDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYY 161 (341)
Q Consensus 83 li~~vG~D~~g~~i~~~l~~~gi~~~~~-~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 161 (341)
++|.+|+| +|+.+++.|++.||+++++ +.++.+|+.+++++++|+|+++.+.+++..++ +++. .++|++
T Consensus 75 ~i~~vG~D-~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~g~r~~~~~~ga~~~~~-~~l~--------~~~~~v 144 (306)
T 3bf5_A 75 LYSAVGMK-THREYLAMIESMGINTGHVEKFEDESGPICYIATDGKKQVSFMHQGAMAAWA-PQLA--------DEYEYV 144 (306)
T ss_dssp EEEEEETT-TCHHHHHHHHHTTCCCTTEEEETTCCCSEEEEEECSSCEEEEEECTHHHHCC-CCCC--------SCEEEE
T ss_pred EEEEEeCC-hHHHHHHHHHHcCCCchheEecCCCCCceEEEEEcCCeeEEEEeCChhhhhh-Hhhc--------CCCCEE
Confidence 99999999 9999999999999999997 45667899999988778888877777666665 3331 579999
Q ss_pred EEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHH
Q 019402 162 YIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIA 241 (341)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~ 241 (341)
|+++.. .+.++++.+++ ++++|+....+. ...+.+.++++++|++++|++|++.+++....+..
T Consensus 145 ~~~~~~------~~~~~~~~a~~---~v~~D~~~~~~~-~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~------ 208 (306)
T 3bf5_A 145 HFSTGP------NYLDMAKSIRS---KIIFDPSQEIHK-YSKDELKKFHEISYMSIFNDHEYRVFREMTGLSSP------ 208 (306)
T ss_dssp EECSSS------SHHHHHHHCCS---EEEECCGGGGGG-SCHHHHHHHHHHCSEEEEEHHHHHHHHHHHCCSSC------
T ss_pred EECChH------HHHHHHHHhCC---cEEEcCchhhhh-ccHHHHHHHHhcCCEEEcCHHHHHHHhCCCCcCcc------
Confidence 998743 45667776654 899999753321 12455778889999999999999999875422110
Q ss_pred HHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHH
Q 019402 242 LKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCY 321 (341)
Q Consensus 242 ~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~ 321 (341)
.+ . ||||+|++|++++++++.+++|++++ + +|||||||+|+|||+++|++|+++++|+++|++
T Consensus 209 -~l------~------vvvT~G~~Ga~~~~~~~~~~~~~~~v---~-vDttGAGDaF~ag~~~~l~~g~~~~~a~~~A~~ 271 (306)
T 3bf5_A 209 -KV------T------TIVTNGERGSSLFMDGKKYDFPAIPS---S-GDTVGAGDSFRAGLYLALYNRRSIEKGMIYGTI 271 (306)
T ss_dssp -SS------C------EEEEEGGGEEEEEETTEEEEEECCCC---C-SCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred -cE------E------EEEeecccCeEEEeCCcEEEecCCcC---C-CCCCCccHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 12 1 99999999999998888888887755 7 999999999999999999999999999999999
Q ss_pred HHhhhhhh--ccc--cCCCCCC
Q 019402 322 AANVVIQR--SGC--TYPPKPE 339 (341)
Q Consensus 322 ~aa~~v~~--~g~--~~p~~~e 339 (341)
+|+.++++ .|+ .+|+.+|
T Consensus 272 ~aa~~v~~~~~G~~~~~p~~~e 293 (306)
T 3bf5_A 272 IAHHVIDDGIENFSLNMEDLER 293 (306)
T ss_dssp HHHHHHHHCSTTCCCCHHHHHH
T ss_pred HHHHHhccCCccccccCCCHHH
Confidence 99999999 998 3555443
|
| >2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=311.03 Aligned_cols=295 Identities=16% Similarity=0.187 Sum_probs=228.9
Q ss_pred ceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEE
Q 019402 5 GILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li 84 (341)
++|+++|+.+.++...-. .......+....+||++.|+|.++++ | |.++.++
T Consensus 13 ~~~~~~ge~l~~~~~~~~-------------------------~~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~~~~i 64 (351)
T 2afb_A 13 MKVVTFGEIMLRLSPPDH-------------------------KRIFQTDSFDVTYGGAEANVAAFLAQ-M--GLDAYFV 64 (351)
T ss_dssp CEEEEESCCEEEEECSTT-------------------------CCGGGCSEEEEEEECHHHHHHHHHHH-T--TSEEEEE
T ss_pred ceEEEechhhheecCCCC-------------------------ccccccceeeEecCChHHHHHHHHHH-c--CCCeEEE
Confidence 489999999988664211 11234567788999999999999998 4 5999999
Q ss_pred EeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCee-ceeeccc---ccccCCcccCCCchhHhhhhcceE
Q 019402 85 GCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGER-SLVANLS---AANCYKSEHLKRPEIWSIVEKAKY 160 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 160 (341)
|.+|+|.+|+.+++.|++.||+++++...+.+|+.+++..++++| .++.+.. +...++++++. ....++++|+
T Consensus 65 ~~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~t~~~~v~~~~~~r~~~v~~~~~~~a~~~~~~~~~~---~~~~~~~~~~ 141 (351)
T 2afb_A 65 TKLPNNPLGDAAAGHLRKFGVKTDYIARGGNRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFD---WEKILDGARW 141 (351)
T ss_dssp EEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCEEEEECCBTTBCCEEEEECTTCTTTTCCGGGCC---HHHHTTTEEE
T ss_pred EEeCCCHHHHHHHHHHHHcCCcceeEEECCCcceEEEEEecCCCCcceEEEeCCCChhhhCChhhCC---HHHhhcCCCE
Confidence 999999999999999999999999986556678888776655555 3344332 22355555554 1234689999
Q ss_pred EEEeccccccC---HHHHHHHHHHHHhcCCeEEEeCCc--HHHH-hhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCC--
Q 019402 161 YYIAGFFLTVS---PESIQMVAEHAAAKNKVFMMNLSA--PFIC-EFFREPQEKALPYMDYVFGNETEARTFAKVHGW-- 232 (341)
Q Consensus 161 v~i~~~~~~~~---~~~~~~~~~~~~~~~~~v~~d~~~--~~~~-~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~-- 232 (341)
+|++++.+..+ .+.+.++++.+++.++++++|+.. ..|. ...++.+.++++++|++++|++|+..|++....
T Consensus 142 v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~ 221 (351)
T 2afb_A 142 FHFSGITPPLGKELPLILEDALKVANEKGVTVSCDLNYRARLWTKEEAQKVMIPFMEYVDVLIANEEDIEKVLGISVEGL 221 (351)
T ss_dssp EEEETTSGGGSTTHHHHHHHHHHHHHHHTCEEEEECCCCTTTCCHHHHHHHHHHHGGGCSEEEECHHHHHHHHCCCCSCC
T ss_pred EEEeCcccccChhHHHHHHHHHHHHHHcCCEEEEeCCCchhcCChHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCcccc
Confidence 99998764333 378889999999999999999963 1221 123456778999999999999999999875321
Q ss_pred -------CCCCHHHHHHHHhcCCCCCCC-CccEEEEeeCCCCE--------EEEeCCeEEEEecccCCCCcccCCCCcch
Q 019402 233 -------ETDNVEEIALKISQWPKASGT-HKRITVITQGADPV--------VVAEDGKVKLFPVILLPKEKLVDTNGAGD 296 (341)
Q Consensus 233 -------~~~~~~~~~~~l~~~~~~~~~-~~~~vvvt~G~~G~--------~~~~~~~~~~v~~~~~~~~~vvdttGAGD 296 (341)
+.++++++++.+ ... +++.||||+|++|+ +++.+++.+++|++++ +++|||||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~l------~~~~g~~~vvvT~G~~G~~~~~~~g~~~~~~~~~~~~~~~~v---~vvdttGAGD 292 (351)
T 2afb_A 222 DLKTGKLNREAYAKIAEEV------TRKYNFKTVGITLRESISATVNYWSVMVFENGQPHFSNRYEI---HIVDRVGAGD 292 (351)
T ss_dssp -------CHHHHHHHHHHH------HHHHCCSEEEEEEEECSCSSEEEEEEEEEETTEEEECCCEEE---ECSCCTTHHH
T ss_pred cccccccchhhHHHHHHHH------HHHcCCCEEEEEeCCcCccccccceeEEEeCCcEEEcCCCCC---ccCCCCCchH
Confidence 112355667777 332 78899999999975 7777888888887765 7899999999
Q ss_pred hhHHHHHHHHhcCCCHHHHHHHHHHHHhhhhhhccc-cCCCCCC
Q 019402 297 AFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGC-TYPPKPE 339 (341)
Q Consensus 297 af~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~g~-~~p~~~e 339 (341)
+|+|||+++|++|+++++|+++|+++|+.++++.|+ .+|+.+|
T Consensus 293 aF~ag~~~~l~~g~~l~~a~~~A~~~aa~~v~~~G~~~~~~~~e 336 (351)
T 2afb_A 293 SFAGALIYGSLMGFDSQKKAEFAAAASCLKHTIPGDFVVLSIEE 336 (351)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTSSSSSCCCCHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 999999999999999999999999999999999998 5666554
|
| >1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-39 Score=285.95 Aligned_cols=254 Identities=18% Similarity=0.139 Sum_probs=199.2
Q ss_pred CCceeecCchhHHHHHHHHHHhCCCCceEEEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceee
Q 019402 54 ENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVA 133 (341)
Q Consensus 54 ~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~ 133 (341)
.+....+||++.|+|.++++ + |.++.++|.+|+|. +.+++.|++.||+++++.. +.+|+.+.+...+|+++++.
T Consensus 29 ~~~~~~~GG~~~NvA~~la~-L--G~~~~~i~~vG~D~--~~~~~~L~~~gVd~~~v~~-~~~t~~~~i~~~~g~~~~~~ 102 (298)
T 1vk4_A 29 GKREIAYGGGVVMGAITSSL-L--GVKTKVITKCTRED--VSKFSFLRDNGVEVVFLKS-PRTTSIENRYGSDPDTRESF 102 (298)
T ss_dssp TEEEEEEECHHHHHHHHHHH-T--TCEEEEEEEECTTT--GGGGTTTGGGTCEEEEEEC-SSCEEEEEEC-----CCEEE
T ss_pred CeEEEecCCHHHHHHHHHHH-c--CCceEEEEEEcCCH--HHHHHHHHHcCCceEEEec-CCCcEEEEEEcCCCCeeEEE
Confidence 45678999999999999998 4 59999999999997 7788999999999999864 34565555543368888777
Q ss_pred cccccccCCcccCCCchhHhhhhcceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHh--------hhhHH
Q 019402 134 NLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICE--------FFREP 205 (341)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~--------~~~~~ 205 (341)
+.+++..++++++.. ..+++++++++.. .+...++++.+++++.++++|+.+ .... ...+.
T Consensus 103 ~~~~~~~l~~~~~~~-------~~~~~v~~~~~~~---~~~~~~~~~~~~~~g~~v~~D~~~-~~~~~~~~~~~~~~~~~ 171 (298)
T 1vk4_A 103 LISAADPFTESDLAF-------IEGEAVHINPLWY---GEFPEDLIPVLRRKVMFLSADAQG-FVRVPENEKLVYRDWEM 171 (298)
T ss_dssp EEECCCCCCGGGGGG-------CCSSEEEECCSST---TSSCGGGHHHHHHHCSEEEEETHH-HHEEEETTEEEECCCTT
T ss_pred eccccccCCHHHcCc-------CCCCEEEECCccc---ccccHHHHHHHHHcCCEEEEecCc-cccccccccccccchHH
Confidence 767666666665531 5789999987632 122346667778889999999964 2110 11124
Q ss_pred HHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCC
Q 019402 206 QEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPK 285 (341)
Q Consensus 206 ~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~ 285 (341)
+.++++++|++++|++|++.|++ .++++++++.+ ...|++.||||+ ++|++++++ +.+++|++++
T Consensus 172 ~~~~l~~~dil~~N~~E~~~l~g-----~~~~~~~~~~l------~~~g~~~vvvT~-~~G~~~~~~-~~~~~~~~~v-- 236 (298)
T 1vk4_A 172 KEKYLKYLDLFKVDSREAETLTG-----TNDLRESCRII------RSFGAKIILATH-ASGVIVFDG-NFYEASFRSW-- 236 (298)
T ss_dssp HHHHGGGCSEEEEEHHHHHHHHS-----CSCHHHHHHHH------HHTTCSSEEEEE-TTEEEEESS-SEEEEECCCS--
T ss_pred HHhhcccCCEEecCHHHHHHHhC-----CCCHHHHHHHH------HhcCCCEEEEEc-CCCcEEEeC-CEEEeccCCc--
Confidence 67789999999999999999987 34688888888 456788999999 999999877 7778886644
Q ss_pred CcccCCCCcchhhHHHHHHHHhc-CCCHHHHHHHHHHHHhhhhhhcccc-CCCCCCC
Q 019402 286 EKLVDTNGAGDAFVGGFLSQLVQ-EKPVEDCVRTGCYAANVVIQRSGCT-YPPKPEF 340 (341)
Q Consensus 286 ~~vvdttGAGDaf~a~~~~~l~~-g~~~~~a~~~A~~~aa~~v~~~g~~-~p~~~e~ 340 (341)
+++|||||||+|+|||+++|++ |+++++|+++|+++|+.++++.|+. .|+.+|+
T Consensus 237 -~vvDttGAGDaF~a~~~~~l~~~g~~~~~a~~~A~a~aa~~v~~~G~~~~~~~~el 292 (298)
T 1vk4_A 237 -SLEGRTGRGDTCTAAFLVGFVFKKMSIEKATKFAAAVTSVKMRHPGPLRREDLEAI 292 (298)
T ss_dssp -SGGGGTTHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHTTSSSSCCGGGGGGC
T ss_pred -ccCCCcCccHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHccCCCCCCCCHHHH
Confidence 8999999999999999999999 9999999999999999999999994 4566655
|
| >2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-25 Score=202.48 Aligned_cols=222 Identities=14% Similarity=0.135 Sum_probs=153.2
Q ss_pred ceEEEEeecCCchhHHHHHHHHhcCCceeEeecC--CCCcceEEEEEeCCeeceeecccccccCCcccCCC-chhHhh--
Q 019402 80 ATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDE--SAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKR-PEIWSI-- 154 (341)
Q Consensus 80 ~v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~--~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~-- 154 (341)
.+.++|.+|+|. |+++ |+++||+++++... ..+|++.+ ..+ ..++++++.. .+.+..
T Consensus 12 ~~~~~g~vG~D~-g~~i---L~~~GV~~~~v~~~~~~~~t~~~~------------~~g--~~l~~~~i~~~~~~~~~~~ 73 (312)
T 2yxt_A 12 SHVIRGYVGNRA-ATFP---LQVLGFEIDAVNSVQFSNHTGYAH------------WKG--QVLNSDELQELYEGLRLNN 73 (312)
T ss_dssp EEESSSCSTHHH-HHHH---HHHTTCEEEEEEEEEESSCTTSSC------------CCE--EECCHHHHHHHHHHHHHTT
T ss_pred cccCCCccchHh-hHHH---HHHcCCeEEEEEEEEecCCCCcCC------------ccC--ccCCHHHHHHHHHHHHhcC
Confidence 467889999998 9988 99999999987531 12233221 111 2344444432 011111
Q ss_pred hhcceEEEEeccccc-cCHHHHHHHHHHHHhcCCe--EEEeCCcH--------HH-HhhhhHHHHh-hCCCCcEEEcCHH
Q 019402 155 VEKAKYYYIAGFFLT-VSPESIQMVAEHAAAKNKV--FMMNLSAP--------FI-CEFFREPQEK-ALPYMDYVFGNET 221 (341)
Q Consensus 155 ~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~~--v~~d~~~~--------~~-~~~~~~~~~~-~l~~~dil~~n~~ 221 (341)
+.++|++++ |+... ...+.+.++++.++++|.+ +++||... .| .....+.+.+ +++++|++++|++
T Consensus 74 ~~~~~~v~~-G~~~~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~~~~~~~l~~~ll~~~dil~pN~~ 152 (312)
T 2yxt_A 74 MNKYDYVLT-GYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEKVVPLADIITPNQF 152 (312)
T ss_dssp CCCCSEEEE-CCCCCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSCTTHHHHHHHTTGGGCSEECCCHH
T ss_pred CccCCEEEE-CCCCCHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCCHHHHHHHHHHhhhhCCEEcCCHH
Confidence 567899876 43221 1135566888989888854 88997421 11 1123344554 8999999999999
Q ss_pred HHHHHHhhcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCC------CEEEE-------eC-C----eEEEEecccC
Q 019402 222 EARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGAD------PVVVA-------ED-G----KVKLFPVILL 283 (341)
Q Consensus 222 E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~------G~~~~-------~~-~----~~~~v~~~~~ 283 (341)
|++.|++....+.++.+++++.+ ...|++.||||.|+. |++++ .+ + ..++++++++
T Consensus 153 Ea~~L~g~~~~~~~~~~~~~~~l------~~~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 226 (312)
T 2yxt_A 153 EAELLSGRKIHSQEEALRVMDML------HSMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIRKV 226 (312)
T ss_dssp HHHHHHSCCCCSHHHHHHHHHHH------HHHSCSEEEECCCSCCCTTCTTEEEEEEEEEC----CCCCEEEEEEEEECC
T ss_pred HHHHHhCCCCCCHHHHHHHHHHH------HHcCCCEEEEecccCCCCCCCceEEEEEeccccccccccccceEEEeeccc
Confidence 99999875433334567777877 456789999998876 47765 44 2 5677887665
Q ss_pred CCCcccCCCCcchhhHHHHHHHHhc-CCCHHHHHHHHHHHHhhhhhhc
Q 019402 284 PKEKLVDTNGAGDAFVGGFLSQLVQ-EKPVEDCVRTGCYAANVVIQRS 330 (341)
Q Consensus 284 ~~~~vvdttGAGDaf~a~~~~~l~~-g~~~~~a~~~A~~~aa~~v~~~ 330 (341)
++ ||+||||+|+|+|+++|++ |+++++|+++|+++|+.++++.
T Consensus 227 ---~v-dttGAGDaf~a~~~~~l~~~g~~l~~a~~~A~a~a~~~v~~~ 270 (312)
T 2yxt_A 227 ---DA-VFVGTGDLFAAMLLAWTHKHPNNLKVACEKTVSTLHHVLQRT 270 (312)
T ss_dssp ---SS-CCSSHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred ---CC-CCCCchHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 55 9999999999999999999 9999999999999998888653
|
| >2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-24 Score=191.32 Aligned_cols=227 Identities=14% Similarity=0.108 Sum_probs=157.9
Q ss_pred CceEE-EEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEe-CCeeceeecccccccCCcccCCC-chhH-h-
Q 019402 79 GATSY-IGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKR-PEIW-S- 153 (341)
Q Consensus 79 ~~v~l-i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~-~~~~-~- 153 (341)
+.... +|.+|.| .....|++.|+++.++.. . +..+ .|.+.+ .+ ..++++.+.. .+.+ +
T Consensus 21 i~~~~~~g~~G~d----~~~~~l~~~Gv~~~~v~t-------~-i~~~~~g~~~~---~g--~~~~~~~~~~~~~~l~~~ 83 (283)
T 2ddm_A 21 VQSQVVYGSVGNS----IAVPAIKQNGLNVFAVPT-------V-LLSNTPHYDTF---YG--GAIPDEWFSGYLRALQER 83 (283)
T ss_dssp EEEEESSSSSTHH----HHHHHHHHTTCCEEEEEE-------E-EESSCTTSSCC---CE--EECCHHHHHHHHHHHHHT
T ss_pred EecccCCCcchHH----HHHHHHHHcCCeeeEEeE-------E-EeccCCCcCce---ee--eeCCHHHHHHHHHHHHhc
Confidence 55444 7888877 346788999999998742 1 1112 343331 11 2333343321 0111 1
Q ss_pred -hhhcceEEEEeccccccCHHHHHHHHHHHHh--cCCeEEEeCCcH-----HHH-hh-hhHHHHhhCCCCcEEEcCHHHH
Q 019402 154 -IVEKAKYYYIAGFFLTVSPESIQMVAEHAAA--KNKVFMMNLSAP-----FIC-EF-FREPQEKALPYMDYVFGNETEA 223 (341)
Q Consensus 154 -~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~--~~~~v~~d~~~~-----~~~-~~-~~~~~~~~l~~~dil~~n~~E~ 223 (341)
.++++++++++........+.+.++++.+++ .++++++||... .|. .. ......++++++|++++|++|+
T Consensus 84 ~~~~~~~~v~~G~l~~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~E~ 163 (283)
T 2ddm_A 84 DALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFEL 163 (283)
T ss_dssp TCCTTCCEEEECCCSCHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEECCBHHHH
T ss_pred CCcccCCEEEECCcCCHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEecCCHHHH
Confidence 3457899998654332234677888888887 789999997421 111 11 1222346889999999999999
Q ss_pred HHHHhhcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCC-------CEEEEeCCeEEEEecccCCCCcccCCCCcch
Q 019402 224 RTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGAD-------PVVVAEDGKVKLFPVILLPKEKLVDTNGAGD 296 (341)
Q Consensus 224 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~-------G~~~~~~~~~~~v~~~~~~~~~vvdttGAGD 296 (341)
+.|++....+.++..++++++ ...+++.||||.|++ |++++++++.++++++++ . +||+||||
T Consensus 164 ~~L~g~~~~~~~~~~~~a~~l------~~~g~~~Vvvt~G~~~~~~~~~G~~~~~~~~~~~~~~~~v---~-vdt~GAGD 233 (283)
T 2ddm_A 164 EILTGKNCRDLDSAIAAAKSL------LSDTLKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRV---K-TDLKGTGD 233 (283)
T ss_dssp HHHHTSCCSSHHHHHHHHHHH------CCSSCCEEEEEC-------CEEEEEEEETTEEEEEEEECC---C-CCCCCHHH
T ss_pred HHHhCCCCCCHHHHHHHHHHH------HHcCCCEEEEccccCccCCCceeEEEEeCCceEEEeecee---C-CCCCChHH
Confidence 999985433334567778888 667899999999999 889988888888887654 4 79999999
Q ss_pred hhHHHHHHHHhcCCCHHHHHHHHHHHHhhhhhhccc
Q 019402 297 AFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGC 332 (341)
Q Consensus 297 af~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~g~ 332 (341)
+|+|+|+++|++|+++++|+++|+++++.++++...
T Consensus 234 af~a~~~~~l~~g~~~~~A~~~A~a~a~~~v~~~~~ 269 (283)
T 2ddm_A 234 LFCAQLISGLLKGKALTDAVHRAGLRVLEVMRYTQQ 269 (283)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999987643
|
| >1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4.3e-23 Score=183.26 Aligned_cols=161 Identities=11% Similarity=0.077 Sum_probs=121.9
Q ss_pred ceEEEEeccccccCHHHHHHHHHHHHhcCCe-EEEeCCcH------HHHhhhhHHHHh-hCCCCcEEEcCHHHHHHHHhh
Q 019402 158 AKYYYIAGFFLTVSPESIQMVAEHAAAKNKV-FMMNLSAP------FICEFFREPQEK-ALPYMDYVFGNETEARTFAKV 229 (341)
Q Consensus 158 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~-v~~d~~~~------~~~~~~~~~~~~-~l~~~dil~~n~~E~~~l~~~ 229 (341)
+|++++.. ..+.+.+..+++.+++.+.+ +++||... .+.....+.+.+ +++++|++++|++|++.|++.
T Consensus 95 ~~~v~~G~---l~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll~~~dil~pN~~Ea~~L~g~ 171 (288)
T 1jxh_A 95 IDTTKIGM---LAETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALLDA 171 (288)
T ss_dssp CSEEEECC---CCSHHHHHHHHHHHHHTTCCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBHHHHHHHHTC
T ss_pred CCEEEECC---CCCHHHHHHHHHHHHHCCCCeEEEcCcccCCCCCccCCHHHHHHHHHHHHhhCcEEcCCHHHHHHHcCC
Confidence 68887753 22678889999999999986 99997532 111111233443 789999999999999999875
Q ss_pred -cCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCC-----EEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHH
Q 019402 230 -HGWETDNVEEIALKISQWPKASGTHKRITVITQGADP-----VVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFL 303 (341)
Q Consensus 230 -~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G-----~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~ 303 (341)
...+.++.+++++++ .+.+++.||+|.|++| ++++++++.++++++++ +++||+||||+|+|+|+
T Consensus 172 ~~~~~~~~~~~~a~~l------~~~g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~---~~vdttGAGD~f~a~~~ 242 (288)
T 1jxh_A 172 PHARTEQEMLAQGRAL------LAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRV---NTKNTHGTGCTLSAALA 242 (288)
T ss_dssp CCCCSHHHHHHHHHHH------HHTTCSEEEEBC---------CEEECSSCEEEC---CC---CCSCCBTHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH------HHhCCCEEEEeccCCCCCceeEEEEECCeEEEEecccc---CCCCCCCchHHHHHHHH
Confidence 333334566777787 4567889999999999 88887777777776544 78999999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHhhhhhhc
Q 019402 304 SQLVQEKPVEDCVRTGCYAANVVIQRS 330 (341)
Q Consensus 304 ~~l~~g~~~~~a~~~A~~~aa~~v~~~ 330 (341)
++|++|+++++|+++|+++++.++++.
T Consensus 243 a~l~~g~~~~~A~~~A~a~a~~~v~~~ 269 (288)
T 1jxh_A 243 ALRPRHRSWGETVNEAKAWLSAALAQA 269 (288)
T ss_dssp HHGGGSSSHHHHHHHHHHHHHHHHTTG
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999876
|
| >1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=6.1e-21 Score=166.74 Aligned_cols=162 Identities=15% Similarity=0.160 Sum_probs=125.6
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhcC-CeEEEeCCcH------HHHhhhhHHH-HhhCCCCcEEEcCHHHHHHHHh
Q 019402 157 KAKYYYIAGFFLTVSPESIQMVAEHAAAKN-KVFMMNLSAP------FICEFFREPQ-EKALPYMDYVFGNETEARTFAK 228 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~-~~v~~d~~~~------~~~~~~~~~~-~~~l~~~dil~~n~~E~~~l~~ 228 (341)
+.+.+++.. + .+.+.+..+++.+++.+ .++++|+... .|.....+.+ .++++++|++++|++|++.|++
T Consensus 70 ~~~~v~~G~--l-~~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g 146 (258)
T 1ub0_A 70 PLHAAKTGA--L-GDAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEALLG 146 (258)
T ss_dssp CCSEEEECC--C-CSHHHHHHHHHHHHHTTCCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHHHC
T ss_pred CCCEEEECC--c-CCHHHHHHHHHHHHhCCCCcEEECCeeecCCCCcccChHHHHHHHHhhcccCeEEeCCHHHHHHHhC
Confidence 367777653 1 25677888899999888 8999998432 1211112234 4688999999999999999987
Q ss_pred hcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCC-C----EEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHH
Q 019402 229 VHGWETDNVEEIALKISQWPKASGTHKRITVITQGAD-P----VVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFL 303 (341)
Q Consensus 229 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~-G----~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~ 303 (341)
....+.++..++++++ ...|++.||+|.|++ | ++++++++.++++++++ +++||+||||+|+|+|+
T Consensus 147 ~~~~~~~~~~~~a~~l------~~~g~~~vvvt~g~~~G~~~~~~~~~~~~~~~~~~~~~---~~~dt~GaGD~f~a~~~ 217 (258)
T 1ub0_A 147 RPIRTLKEAEEAAKAL------LALGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPRV---HTRNTHGTGCTLSAAIA 217 (258)
T ss_dssp SCCCSHHHHHHHHHHH------HTTSCSCEEEEEEECC---EEEEEEETTEEEEEEECCC---CCSCCTTHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH------HHcCCCEEEEccCCCCCCceEEEEEeCCeEEEEecccc---CCCCCCChHHHHHHHHH
Confidence 5433334566778888 456788999999998 8 78888888888887654 78999999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHhhhhhhc
Q 019402 304 SQLVQEKPVEDCVRTGCYAANVVIQRS 330 (341)
Q Consensus 304 ~~l~~g~~~~~a~~~A~~~aa~~v~~~ 330 (341)
+++++|+++++|+++|+++++.++++.
T Consensus 218 ~~l~~g~~~~~a~~~a~~~~~~~~~~~ 244 (258)
T 1ub0_A 218 ALLAKGRPLAEAVAEAKAYLTRALKTA 244 (258)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998764
|
| >2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.82 E-value=9.1e-20 Score=160.43 Aligned_cols=162 Identities=16% Similarity=0.154 Sum_probs=127.0
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhcCC-eEEEeCCcH--H----HHhhhhHHHH-hhCCCCcEEEcCHHHHHHHHh
Q 019402 157 KAKYYYIAGFFLTVSPESIQMVAEHAAAKNK-VFMMNLSAP--F----ICEFFREPQE-KALPYMDYVFGNETEARTFAK 228 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~-~v~~d~~~~--~----~~~~~~~~~~-~~l~~~dil~~n~~E~~~l~~ 228 (341)
+.|++++... .+.+.+..+++.+++.+. ++++||... . +.....+.+. ++++++|++++|.+|++.|++
T Consensus 74 ~~d~v~~G~l---~~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L~g 150 (271)
T 2i5b_A 74 GVDAMKTGML---PTVDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQLSG 150 (271)
T ss_dssp CCSEEEECCC---CSHHHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHHHT
T ss_pred CCCEEEECCC---CCHHHHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHHhC
Confidence 5788888542 236788889999999888 599997421 1 1111223454 688999999999999999987
Q ss_pred hc-CCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCC--CCE----EEEeCCeEEEEecccCCCCcccCCCCcchhhHHH
Q 019402 229 VH-GWETDNVEEIALKISQWPKASGTHKRITVITQGA--DPV----VVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGG 301 (341)
Q Consensus 229 ~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~--~G~----~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~ 301 (341)
.. ..+.++..++++++ .+.+++.||+|.|. +|+ +++++++.++++++++ +++||+||||+|+|+
T Consensus 151 ~~~~~~~~~~~~~a~~l------~~~g~~~Vvvt~g~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~dt~GaGD~f~a~ 221 (271)
T 2i5b_A 151 MDELKTVDDMIEAAKKI------HALGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMI---DTPYTHGAGCTFSAA 221 (271)
T ss_dssp CCCCCSHHHHHHHHHHH------HTTTCSEEEEECGGGSCSSSEEEEEECSSCEEEEEECCC---CCSCCBTHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHH------HHhCCCEEEEcCCCCCCCCceEEEEEeCCeEEEEecccc---CCCCCCChHHHHHHH
Confidence 54 33333566778888 55678999999999 784 6777777778887654 789999999999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHhhhhhhc
Q 019402 302 FLSQLVQEKPVEDCVRTGCYAANVVIQRS 330 (341)
Q Consensus 302 ~~~~l~~g~~~~~a~~~A~~~aa~~v~~~ 330 (341)
|++++++|+++++|+++|+++++.++++.
T Consensus 222 ~~~~l~~g~~~~~A~~~A~~~~~~~~~~~ 250 (271)
T 2i5b_A 222 VTAELAKGAEVKEAIYAAKEFITAAIKES 250 (271)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999875
|
| >3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=7.6e-20 Score=162.24 Aligned_cols=167 Identities=13% Similarity=0.123 Sum_probs=126.5
Q ss_pred hcceEEEEecccc-ccCHHHHHHHHHHHHhcC--CeEEEeC----Cc--HHHHhhhhHHHH-hhCCCCcEEEcCHHHHHH
Q 019402 156 EKAKYYYIAGFFL-TVSPESIQMVAEHAAAKN--KVFMMNL----SA--PFICEFFREPQE-KALPYMDYVFGNETEART 225 (341)
Q Consensus 156 ~~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~--~~v~~d~----~~--~~~~~~~~~~~~-~~l~~~dil~~n~~E~~~ 225 (341)
.+.|++. .|+.. ....+.+.++++.+++.+ .++++|| .+ ..+.+...+.++ .+++++|++++|..|++.
T Consensus 76 ~~~d~v~-~G~l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~l~~~ll~~~diitpN~~E~~~ 154 (289)
T 3pzs_A 76 KDCDAVL-SGYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFCNEALPASDMIAPNLLELEQ 154 (289)
T ss_dssp GGCCEEE-ECCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHHHHHTHHHHCSEECCCHHHHHH
T ss_pred cCCCEEE-ECCCCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHHHHHHhhccCCEEeCCHHHHHH
Confidence 5788864 45432 223467888888888766 7899996 21 223333334455 478899999999999999
Q ss_pred HHhhcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeC-CCCE-------EEEeCCeEEEEecccCCCCcccCCCCcchh
Q 019402 226 FAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQG-ADPV-------VVAEDGKVKLFPVILLPKEKLVDTNGAGDA 297 (341)
Q Consensus 226 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G-~~G~-------~~~~~~~~~~v~~~~~~~~~vvdttGAGDa 297 (341)
|++....+.++..++++++ .+.|++.|+||.| .+|+ +++++++.++++.++++ +.++|++||||+
T Consensus 155 L~g~~~~~~~~~~~aa~~l------~~~g~~~Vvvt~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~dt~GaGD~ 227 (289)
T 3pzs_A 155 LSGERVENVEQAVQVARSL------CARGPKVVLVKHLSRAGYHADCFEMLLVTADDAWHICRPLVD-FGKRQPVGVGDL 227 (289)
T ss_dssp HHTSCCCSHHHHHHHHHHH------HTTSCSEEEECCCGGGSSCTTEEEEEEECSSCEEEEEEECCC-CTTSCCTTHHHH
T ss_pred HhCCCCCCHHHHHHHHHHH------HHHCCCEEEEecccCCCCCCCeEEEEEEeCCeEEEEEeeeec-CCCCCCCcHHHH
Confidence 9986544445667788888 5678999999985 4786 77777777888766552 223899999999
Q ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHhhhhhhc
Q 019402 298 FVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRS 330 (341)
Q Consensus 298 f~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~ 330 (341)
|+|+|++++++|+++++|+++|+++++.++++.
T Consensus 228 f~a~~~~~l~~g~~~~~A~~~A~~~~~~~i~~t 260 (289)
T 3pzs_A 228 TSGLLLVNLLKGEPLDKALEHVTAAVYEVMLKT 260 (289)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988887764
|
| >3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=9.6e-19 Score=154.29 Aligned_cols=161 Identities=15% Similarity=0.098 Sum_probs=127.2
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhc-CCeEEEeCCc----HHH---HhhhhHHHHhhCCCCcEEEcCHHHHHHHHh
Q 019402 157 KAKYYYIAGFFLTVSPESIQMVAEHAAAK-NKVFMMNLSA----PFI---CEFFREPQEKALPYMDYVFGNETEARTFAK 228 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~-~~~v~~d~~~----~~~---~~~~~~~~~~~l~~~dil~~n~~E~~~l~~ 228 (341)
+.|.+.+.- -.+++.+..+.+.+++. +.++++||-- ..| .+...+.++++++++|++++|..|++.|++
T Consensus 74 ~~daik~G~---l~s~~~i~~v~~~l~~~~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~~adiitpN~~Ea~~L~g 150 (282)
T 3h74_A 74 HFDQALIGY---VGSVALCQQITTYLEQQTLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQADVILPNTTEAALLTG 150 (282)
T ss_dssp CCSEEEECC---CCSHHHHHHHHHHHHHSCCSEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCCHHHHHHHHT
T ss_pred ccCEEEECC---CCCHHHHHHHHHHHHHCCCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhccCCEECCCHHHHHHHhC
Confidence 578888742 12566666666666664 5789999931 112 233445567899999999999999999998
Q ss_pred hcCCCCCCHHHHHHHHhcCCCCCC-CCc-cEEEEeeCC----CCEEEEe-CCeEEEEecccCCCCcccCCCCcchhhHHH
Q 019402 229 VHGWETDNVEEIALKISQWPKASG-THK-RITVITQGA----DPVVVAE-DGKVKLFPVILLPKEKLVDTNGAGDAFVGG 301 (341)
Q Consensus 229 ~~~~~~~~~~~~~~~l~~~~~~~~-~~~-~~vvvt~G~----~G~~~~~-~~~~~~v~~~~~~~~~vvdttGAGDaf~a~ 301 (341)
....+.++.+++++++ .+ .|+ +.|+||.|. .|+++++ +++.++++.+++ . +|++|+||+|+|+
T Consensus 151 ~~~~~~~~~~~aa~~L------~~~~g~~~~Vvvt~G~~~~~~g~~~~~~~~~~~~~~~~~v---~-~dt~GaGD~fsaa 220 (282)
T 3h74_A 151 APYQVTPDLEVILPAL------QAQLKTGAHAVITDVQRADQIGCAWLDEAGHVQYCGARRL---P-GHYNGTGDTLAAV 220 (282)
T ss_dssp CCCCSSCCHHHHHHHH------HTTSCTTCEECEEEEEETTEEEEEEECTTSCEEEEEEECC---S-SCCTTHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH------HHHhCCCCEEEEEecCCCCceEEEEEeCCCeEEEEEecCC---C-CCCcCHHHHHHHH
Confidence 7655567899999999 55 688 899999984 7888884 667777776644 3 8999999999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHhhhhhhc
Q 019402 302 FLSQLVQEKPVEDCVRTGCYAANVVIQRS 330 (341)
Q Consensus 302 ~~~~l~~g~~~~~a~~~A~~~aa~~v~~~ 330 (341)
|+++|++|+++++|+++|+++++.++++.
T Consensus 221 i~a~l~~g~~l~~A~~~A~~~~~~ai~~~ 249 (282)
T 3h74_A 221 IAGLLGRGYPLAPTLARANQWLNMAVAET 249 (282)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998864
|
| >3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=2e-18 Score=153.01 Aligned_cols=164 Identities=11% Similarity=0.042 Sum_probs=121.4
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcH----HHH---hhhhHHHHhhCCCCcEEEcCHHHHHHHHhh
Q 019402 157 KAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAP----FIC---EFFREPQEKALPYMDYVFGNETEARTFAKV 229 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~----~~~---~~~~~~~~~~l~~~dil~~n~~E~~~l~~~ 229 (341)
..|.+.+.-....-..+.+.++++.+++.+.++++||-.. .|. +...+.++++++++|++++|..|++.|++.
T Consensus 77 ~~~aik~G~l~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~adiitpN~~Ea~~L~g~ 156 (291)
T 3mbh_A 77 QFDAIYTGYLGSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKADVITPNLTELFYLLDE 156 (291)
T ss_dssp CCSEEEECCCSSTTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCBHHHHHHHHTC
T ss_pred ccCEEEECCCCCHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCCEEeCCHHHHHHHhCC
Confidence 5678887422111123566666666665678999999432 121 233445678999999999999999999985
Q ss_pred cCC---CCCCHHHHHHHHhcCCCCCCCCccEEEEeeCC-------CCEEEEeC--CeEEEEecccCCCCcccCCCCcchh
Q 019402 230 HGW---ETDNVEEIALKISQWPKASGTHKRITVITQGA-------DPVVVAED--GKVKLFPVILLPKEKLVDTNGAGDA 297 (341)
Q Consensus 230 ~~~---~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~-------~G~~~~~~--~~~~~v~~~~~~~~~vvdttGAGDa 297 (341)
... +.++.+++++++ .+.|++.|+||.|. .|++++++ ++.++++.+++ . +|++|+||+
T Consensus 157 ~~~~~~~~~~~~~aa~~L------~~~g~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~~---~-~dt~GaGD~ 226 (291)
T 3mbh_A 157 PYKADSTDEELKEYLRLL------SDKGPQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPYL---P-AHYPGTGDT 226 (291)
T ss_dssp CCCSCCCHHHHHHHHHHH------HHTSCSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEESCC---G-GGSTTHHHH
T ss_pred CCCCCCCHHHHHHHHHHH------HhhCCCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEeccc---C-CCCCChHHH
Confidence 432 234567788888 55688999999653 57788876 35667776543 4 899999999
Q ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHhhhhhhc
Q 019402 298 FVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRS 330 (341)
Q Consensus 298 f~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~ 330 (341)
|+|+|+++|++|+++++|+++|+++++.++++.
T Consensus 227 f~aai~a~l~~g~~l~~A~~~A~~~~~~ai~~~ 259 (291)
T 3mbh_A 227 FTSVITGSLMQGDSLPMALDRATQFILQGIRAT 259 (291)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988888764
|
| >3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.9e-18 Score=152.54 Aligned_cols=163 Identities=13% Similarity=0.068 Sum_probs=117.7
Q ss_pred hcceEEEEecccc-ccCHHHHHHHHHHHHhcC------CeEEEeCC----cHHH-HhhhhHHHHhhCCCCcEEEcCHHHH
Q 019402 156 EKAKYYYIAGFFL-TVSPESIQMVAEHAAAKN------KVFMMNLS----APFI-CEFFREPQEKALPYMDYVFGNETEA 223 (341)
Q Consensus 156 ~~~~~v~i~~~~~-~~~~~~~~~~~~~~~~~~------~~v~~d~~----~~~~-~~~~~~~~~~~l~~~dil~~n~~E~ 223 (341)
.++|+|.+ |+.. ....+.+.++++.+++.+ .++++||- +..| .+...+.++++++++|+++||..|+
T Consensus 75 ~~~daV~t-G~l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~~~~~~~~~~Ll~~adiitPN~~Ea 153 (300)
T 3zs7_A 75 SNYRYILT-GYINNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCKKEVLDAYRELVPLADIVTPNYFEA 153 (300)
T ss_dssp GGCSEEEE-CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC---------CTHHHHHHHHGGGCSEECCCHHHH
T ss_pred ccCCEEEE-CCCCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecCHHHHHHHHHHhhhCCEecCCHHHH
Confidence 46787665 4322 112356667777776654 68999982 1122 2234455677999999999999999
Q ss_pred HHHHhhcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCC-------EEEEeC------CeEEEEecccCCCCcccC
Q 019402 224 RTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADP-------VVVAED------GKVKLFPVILLPKEKLVD 290 (341)
Q Consensus 224 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G-------~~~~~~------~~~~~v~~~~~~~~~vvd 290 (341)
+.|++....+.++.+++++.| .+.|++.|+||.|..| +++..+ ++.++++.+++ +. |
T Consensus 154 ~~L~g~~~~~~~~~~~aa~~L------~~~G~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v---~~-~ 223 (300)
T 3zs7_A 154 SLLSGVTVNDLSSAILAADWF------HNCGVAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRFSGVVPYH---EG-R 223 (300)
T ss_dssp HHHHSSCCCSHHHHHHHHHHH------HHHTCSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEEEEEEECC---SS-C
T ss_pred HHHhCCCCCCHHHHHHHHHHH------HHhCCCEEEEecCcCCCCCceEEEEEeccccccCCCeEEEEEeccC---CC-C
Confidence 999986544445667788888 5568899999999988 333334 46777777665 44 8
Q ss_pred CCCcchhhHHHHHHHHhcCCCHHHHHHHHHHHHhhhhhhc
Q 019402 291 TNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRS 330 (341)
Q Consensus 291 ttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~ 330 (341)
++|+||+|+|+|+++| +|+++++|+++|.++...++++.
T Consensus 224 ~~GtGD~fsaal~a~l-~g~~~~~Av~~A~~~v~~~i~~t 262 (300)
T 3zs7_A 224 YTGTGDVFAACLLAFS-HSHPMDVAIGKSMAVLQELIIAT 262 (300)
T ss_dssp BTTHHHHHHHHHHHHH-TTSCHHHHHHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 99999999999999977776543
|
| >1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=5.1e-16 Score=136.11 Aligned_cols=166 Identities=16% Similarity=0.080 Sum_probs=111.0
Q ss_pred HhhhhcceEEEEeccccc-cCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCC--CCcEEEcCHHHHHHHHh
Q 019402 152 WSIVEKAKYYYIAGFFLT-VSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP--YMDYVFGNETEARTFAK 228 (341)
Q Consensus 152 ~~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~--~~dil~~n~~E~~~l~~ 228 (341)
.+.+..++++++..-.+. ...+.+..+++.+++.++++++|+..........+...++++ +.|++++|..|+..|++
T Consensus 53 ~~~~~~a~~lvi~~G~~~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~~~~~~~~~~~ll~~~~~~vitPN~~E~~~L~g 132 (272)
T 1ekq_A 53 ADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAHTVG 132 (272)
T ss_dssp HHHHHHSSEEEEECTTCCHHHHHHHHHHHHHHHHTTCCEEEECTTBTTBHHHHHHHHHHHHHSCCSEEEECHHHHHHHCC
T ss_pred HHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHhcCCeEEEeCCCcCcccchHHHHHHHHccCCCeEECCCHHHHHHHhC
Confidence 355678899988432221 113567778888889999999999743111111223345555 89999999999999987
Q ss_pred hc-C--------CCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhH
Q 019402 229 VH-G--------WETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFV 299 (341)
Q Consensus 229 ~~-~--------~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~ 299 (341)
.. . .+.++..++++.+.+ .....|++| |+.+ +++++++.++++.... .+.|++|+||+|+
T Consensus 133 ~~~~~~~gvd~~~~~~~~~~aa~~l~~------~~~~vVv~~-G~~~-~i~~~~~~~~~~~~~~---~~~~ttGaGD~la 201 (272)
T 1ekq_A 133 VTDWLIKGVDAGEGGGDIIRLAQQAAQ------KLNTVIAIT-GEVD-VIADTSHVYTLHNGHK---LLTKVTGAGCLLT 201 (272)
T ss_dssp ---------------HHHHHHHHHHHH------HHTSEEEEC-SSSE-EEECSSCEEEECCCCG---GGGGSTTHHHHHH
T ss_pred CCcccccCccCCCCHHHHHHHHHHHHH------HcCCEEEEE-CCCC-EEEeCCEEEEEcCCCc---cccCccCchHHHH
Confidence 53 2 123345567777732 223345555 8877 5566666777765432 6679999999998
Q ss_pred HHHHHHHhcCCCHHHHHHHHHH----HHhhhhh
Q 019402 300 GGFLSQLVQEKPVEDCVRTGCY----AANVVIQ 328 (341)
Q Consensus 300 a~~~~~l~~g~~~~~a~~~A~~----~aa~~v~ 328 (341)
|.+.+.+.+|.++++|+++|++ ++....+
T Consensus 202 g~iaa~la~g~~~~~A~~~A~~~~~~A~~~a~~ 234 (272)
T 1ekq_A 202 SVVGAFCAVEENPLFAAIAAISSYGVAAQLAAQ 234 (272)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 8888888889999999999986 4544443
|
| >3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.1e-14 Score=139.86 Aligned_cols=159 Identities=13% Similarity=0.146 Sum_probs=113.6
Q ss_pred cceEEEEeccccccCHHH---HHHHHHHHHhcCCeEEEeCCc------HHHHhhhhHHHH-hhCCCCcEEEcCHHHHHHH
Q 019402 157 KAKYYYIAGFFLTVSPES---IQMVAEHAAAKNKVFMMNLSA------PFICEFFREPQE-KALPYMDYVFGNETEARTF 226 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~---~~~~~~~~~~~~~~v~~d~~~------~~~~~~~~~~~~-~~l~~~dil~~n~~E~~~l 226 (341)
+.|.|.++.. +.+. +.++++..++.+.++++||-- ..+.....+.+. ++++.+|+++||..|++.|
T Consensus 91 ~~daIkiG~l----s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~~~~~~~~l~~~Ll~~a~iitPN~~Ea~~L 166 (550)
T 3rm5_A 91 KCNVIKTGML----TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLAGKDIVSLITEKVAPFADILTPNIPECYKL 166 (550)
T ss_dssp CCSEEEECSC----CHHHHHHHHHHHHHHGGGSCEEEECCCC---------CTTHHHHHHHHTGGGCSEECCBHHHHHHH
T ss_pred CCCEEEECCC----CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCCCHHHHHHHHHHhhCcceEEecCHHHHHHH
Confidence 6788888643 5544 445555555458899999932 122222333344 7889999999999999999
Q ss_pred Hhhc--CCCCCCHHHHHHHHhcCCCCCCCCc-cEEEEeeCCCC--------E--EEE--eCCeEEEEecccCCCCcccCC
Q 019402 227 AKVH--GWETDNVEEIALKISQWPKASGTHK-RITVITQGADP--------V--VVA--EDGKVKLFPVILLPKEKLVDT 291 (341)
Q Consensus 227 ~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~-~~vvvt~G~~G--------~--~~~--~~~~~~~v~~~~~~~~~vvdt 291 (341)
++.. ..+.++..++++++ .+.+. +.||||.|..+ + +++ .+++.++++.+.+ +++||
T Consensus 167 ~g~~~~i~~~~d~~~aa~~L------~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~~~~~~~~v---~~~~t 237 (550)
T 3rm5_A 167 LGEERKVNGLQDIFQIAKDL------AKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKFIIFKGNFV---NTTHT 237 (550)
T ss_dssp HSCCCCCCSSHHHHHHHHHH------HHHHCCSCEEEEECC-------CCEEEEEEEETTTTEEEEEEEECC---CCSCC
T ss_pred hCCCCCCCCHHHHHHHHHHH------HHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCeEEEEEecCc---CCCCC
Confidence 9853 23345677888888 44455 78999998753 3 455 4567777776654 67899
Q ss_pred CCcchhhHHHHHHHHhcCCCHHHHHHHHHHHHhhhhh
Q 019402 292 NGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQ 328 (341)
Q Consensus 292 tGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~ 328 (341)
+|+||+|+|+++++|++|.++++|+++|+..-...++
T Consensus 238 ~GtGD~fsaaiaa~La~G~~l~eAv~~A~~~v~~ai~ 274 (550)
T 3rm5_A 238 HGTGCTLASAIASNLARGYSLPQSVYGGIEYVQNAVA 274 (550)
T ss_dssp BTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred cChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999965444443
|
| >1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A | Back alignment and structure |
|---|
Probab=99.30 E-value=2.4e-11 Score=105.77 Aligned_cols=161 Identities=14% Similarity=0.085 Sum_probs=107.7
Q ss_pred hHhhhhcceEEEEeccccccCH---HHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCC-CCcEEEcCHHHHHHH
Q 019402 151 IWSIVEKAKYYYIAGFFLTVSP---ESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP-YMDYVFGNETEARTF 226 (341)
Q Consensus 151 ~~~~~~~~~~v~i~~~~~~~~~---~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~-~~dil~~n~~E~~~l 226 (341)
..+.++.+|++++..-.+ +. +.+..+++.+++.++++++|+..........+...++++ ..+++.||..|+..|
T Consensus 50 ~~~~~~~~dalvi~~G~~--~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~~~~~~~~~~~ll~~~~~vITPN~~E~~~L 127 (265)
T 1v8a_A 50 LEEMIRLADAVVINIGTL--DSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISAL 127 (265)
T ss_dssp HHHHHHHCSEEEEECTTC--CHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHH
T ss_pred HHHHHHHCCEEEEEECCC--CHHHHHHHHHHHHHHHHcCCcEEEcCccccccccCHHHHHHHHHhCCcEEcCCHHHHHHH
Confidence 446778899999965322 33 356667788888999999999752111111122233332 289999999999999
Q ss_pred HhhcC----CC----C-CCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchh
Q 019402 227 AKVHG----WE----T-DNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDA 297 (341)
Q Consensus 227 ~~~~~----~~----~-~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDa 297 (341)
++... .+ . ++..++++++.+ .+...|++| |..+ ++++++..+.++.... ...+++|+||+
T Consensus 128 ~g~~~~~~gvd~~~~~~~~~~~aa~~la~------~~~~~Vvlk-G~~d-~i~~~~~~~~~~~g~~---~~~~~~GtGD~ 196 (265)
T 1v8a_A 128 LGEEGKTRGVDSLEYGEEEAKKLTMNAAR------EFNTTVAVT-GAVD-YVSDGRRTFAVYNGHE---LLGRVTGTGCM 196 (265)
T ss_dssp HHHHC----------CHHHHHHHHHHHHH------HTTSEEEEE-SSSE-EEECSSCEEEECCCCG---GGGGSTTHHHH
T ss_pred hCCcccccCcCcccccHHHHHHHHHHHHH------HhCcEEEEc-CCCc-EEEcCCEEEEEcCCCc---CcCCccChhHH
Confidence 98652 11 1 345567777743 233456666 8766 4556667777765322 45599999999
Q ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHhh
Q 019402 298 FVGGFLSQLVQEKPVEDCVRTGCYAANV 325 (341)
Q Consensus 298 f~a~~~~~l~~g~~~~~a~~~A~~~aa~ 325 (341)
|+|.+.+.+++|.+ .+|+..|...-+.
T Consensus 197 Lsg~iaa~lA~g~~-~~Aa~~a~~~~~~ 223 (265)
T 1v8a_A 197 VAALTGAFVAVTEP-LKATTSALVTFGI 223 (265)
T ss_dssp HHHHHHHHHTTSCH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCC-HHHHHHHHHHHHH
Confidence 99999999999999 8888777654333
|
| >2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A | Back alignment and structure |
|---|
Probab=99.05 E-value=1.2e-09 Score=96.94 Aligned_cols=155 Identities=17% Similarity=0.151 Sum_probs=95.1
Q ss_pred hhhhcceEEEEeccccccCHHHHHHHHHHHHh--cCCeEEEeCCcHHHHhhhhHHHHhhC--CCCcEEEcCHHHHHHHHh
Q 019402 153 SIVEKAKYYYIAGFFLTVSPESIQMVAEHAAA--KNKVFMMNLSAPFICEFFREPQEKAL--PYMDYVFGNETEARTFAK 228 (341)
Q Consensus 153 ~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~--~~~~v~~d~~~~~~~~~~~~~~~~~l--~~~dil~~n~~E~~~l~~ 228 (341)
..++..|++.+.. .+..+.+....+.+.++. .+.++++|+.+........ +++ +..++++||..|++.|++
T Consensus 107 ~~~~~~dav~IG~-Gl~~~~~~~~~v~~~l~~~~~~~pvVlDa~g~~ll~~~~----~~l~~~~~~viTPN~~E~~~L~g 181 (310)
T 2r3b_A 107 NVVEQADVILIGP-GLGLDATAQQILKMVLAQHQKQQWLIIDGSAITLFSQGN----FSLTYPEKVVFTPHQMEWQRLSH 181 (310)
T ss_dssp HHHHHCSEEEECT-TCCSSHHHHHHHHHHHHHCCTTCEEEEETHHHHHHHHTT----CCCSSGGGEEEECCHHHHHHHHC
T ss_pred HHhccCCEEEEeC-CCCCCHHHHHHHHHHHHhcCCCCcEEEcCCcchhcccch----hhhcCCCCEEEcCCHHHHHHHhC
Confidence 4456789999863 122233333333333333 4789999996544321111 123 357899999999999987
Q ss_pred hcCCCCC-CH-HHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHH
Q 019402 229 VHGWETD-NV-EEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQL 306 (341)
Q Consensus 229 ~~~~~~~-~~-~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l 306 (341)
....+.+ +. .++++++ ++ +|+..| .+.++++++..+. ... ..+..+++|+||+++|.+.+.+
T Consensus 182 ~~~~~~~~~~a~~aA~~l---------g~--~VvlKG-~~~vi~~~~~~~~-~~~---g~~~~~t~GtGD~Lag~Iaa~l 245 (310)
T 2r3b_A 182 LPIEQQTLANNQRQQAKL---------GS--TIVLKS-HRTTIFHAGEPFQ-NTG---GNPGMATGGTGDTLAGIIAGFL 245 (310)
T ss_dssp CCGGGCCHHHHHHHHHHH---------TS--EEEECS-TTCEEECSSSCEE-CCC---CCGGGCSTTHHHHHHHHHHHHH
T ss_pred CCCCcccchHHHHHHHHh---------Cc--EEEEeC-CceEEEECCEEEE-ECC---CCCCCCCCChHHHHHHHHHHHH
Confidence 5432222 33 5566665 22 455556 4666766444443 333 2367899999999744444445
Q ss_pred hcCCCHHHHHHHHHHHHhhhhh
Q 019402 307 VQEKPVEDCVRTGCYAANVVIQ 328 (341)
Q Consensus 307 ~~g~~~~~a~~~A~~~aa~~v~ 328 (341)
++|.++.+|+.+|+++.+..-.
T Consensus 246 A~g~~~~eA~~~A~~~~~~ag~ 267 (310)
T 2r3b_A 246 AQFKPTIETIAGAVYLHSLIGD 267 (310)
T ss_dssp HHSCSSHHHHHHHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHHHHHH
Confidence 7999999999999877666443
|
| >3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.05 E-value=6e-10 Score=98.88 Aligned_cols=156 Identities=10% Similarity=0.069 Sum_probs=95.4
Q ss_pred hhhhcceEEEEeccccccCHHHHHHHHHHHHh--cCCeEEEeCCcHHHHhhhhHHHHhh-C-CCCcEEEcCHHHHHHHHh
Q 019402 153 SIVEKAKYYYIAGFFLTVSPESIQMVAEHAAA--KNKVFMMNLSAPFICEFFREPQEKA-L-PYMDYVFGNETEARTFAK 228 (341)
Q Consensus 153 ~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~--~~~~v~~d~~~~~~~~~~~~~~~~~-l-~~~dil~~n~~E~~~l~~ 228 (341)
+.++..|.+.+.. .+..+.+....+.+.++. .++++++|+.......... .+ + +..++|+||..|++.|++
T Consensus 121 ~~~~~~dav~IG~-Gl~~~~~~~~~v~~~l~~~~~~~pvVlDa~g~~ll~~~~----~l~L~~~~~viTPN~~E~~~L~g 195 (311)
T 3bgk_A 121 EQITAADVVLMGP-GLAEDDLAQTTFDVVWQAIEPKQTLIIDGSAINLLAKRK----PAIWPTKQIILTPHQKEWERLSG 195 (311)
T ss_dssp HHHHHCSEEEECT-TCCSSHHHHHHHHHHHHHCCTTSEEEEETHHHHHHHHCC-----CCCSCSCEEEECCSCC-CTTTC
T ss_pred HHhccCCEEEEcC-CCCCCHHHHHHHHHHHHHcCCCCeEEEeCChhhhhccCh----hhcCCCCCEEECCcHHHHHHHhC
Confidence 4556789999963 122233333333333333 4789999996544221111 12 3 468899999999999987
Q ss_pred hcCCCC-CCH-HHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHH-
Q 019402 229 VHGWET-DNV-EEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQ- 305 (341)
Q Consensus 229 ~~~~~~-~~~-~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~- 305 (341)
....+. ++. .++++++ .+ + .+|+..| .+.++++++..+. .... .+..+++|+||++ +|++++
T Consensus 196 ~~~~~~~~d~~~~aa~~l------~~-g--~~VvlkG-~~~~i~~~~~~~~-~~~~---~~~~~t~GtGD~L-ag~iaa~ 260 (311)
T 3bgk_A 196 LTIPEQIEAATQTALAHF------PK-E--TILVAKS-HQTKIYQGQKIGH-IQVG---GPYQATGGMGDTL-AGMIAGF 260 (311)
T ss_dssp CCSTTCCHHHHHHHHTTS------CT-T--CEEEECS-SSCEEEETTEEEE-ECCC---CGGGCSTTHHHHH-HHHHHHH
T ss_pred CCCCcchhhHHHHHHHHH------hc-C--CEEEEeC-CCeEEEECCEEEE-ECCC---CCCCCCCcHHHHH-HHHHHHH
Confidence 543322 123 4555555 34 3 3455556 4677777554543 3333 3678999999998 555555
Q ss_pred Hhc-CCCHHHHHHHHHHHHhhhhh
Q 019402 306 LVQ-EKPVEDCVRTGCYAANVVIQ 328 (341)
Q Consensus 306 l~~-g~~~~~a~~~A~~~aa~~v~ 328 (341)
+++ |.++++|+++|+++.+..-+
T Consensus 261 lA~~g~~~~eA~~~A~~~~~~ag~ 284 (311)
T 3bgk_A 261 VAQFHTDRFEVAAAAVFLHSYIAD 284 (311)
T ss_dssp HHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHccCCCHHHHHHHHHHHHHHHHH
Confidence 569 99999999999877766443
|
| >3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=98.91 E-value=2.2e-08 Score=86.81 Aligned_cols=160 Identities=18% Similarity=0.134 Sum_probs=105.3
Q ss_pred hhHhhhhcceEEEEeccccccCH---HHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhC-CCCcEEEcCHHHHHH
Q 019402 150 EIWSIVEKAKYYYIAGFFLTVSP---ESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKAL-PYMDYVFGNETEART 225 (341)
Q Consensus 150 ~~~~~~~~~~~v~i~~~~~~~~~---~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l-~~~dil~~n~~E~~~ 225 (341)
+..+..+.++.+++..-.+ +. +.+...++.+++.++++++||-.-.......+...+++ ...++|.+|..|+..
T Consensus 51 e~~e~~~~a~alvIn~G~l--~~~~~~~~~~a~~~a~~~~~PvVlDPVg~gas~~r~~~~~~Ll~~~~~VItpN~~E~~~ 128 (273)
T 3dzv_A 51 EFPQMFQQTSALVLNLGHL--SQEREQSLLAASDYARQVNKLTVVDLVGYGASDIRNEVGEKLVHNQPTVVKGNLSEMRT 128 (273)
T ss_dssp GHHHHHTTCSEEEEECCSC--CHHHHHHHHHHHHHHHHTTCCEEEECTTTTSCHHHHHHHHHHHHTCCSEEEEEHHHHHH
T ss_pred HHHHHHHHCCeEEEecCCC--ChHHHHHHHHHHHHHHHcCCcEEEchhhcCCcccCHHHHHHHHhcCCcEECCCHHHHHH
Confidence 4556778899999975432 33 45667777788899999999954221111112222222 368999999999999
Q ss_pred HHhhcCC----CC-------C---CHHHHHHHHhcCCCCCCCCc-cEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccC
Q 019402 226 FAKVHGW----ET-------D---NVEEIALKISQWPKASGTHK-RITVITQGADPVVVAEDGKVKLFPVILLPKEKLVD 290 (341)
Q Consensus 226 l~~~~~~----~~-------~---~~~~~~~~l~~~~~~~~~~~-~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvd 290 (341)
|++.... +. + +..++++++.+ ... ..|++| |.. -+++++++.+.++.... ..-+
T Consensus 129 L~g~~~~~~GVds~~~~~~~~~~~d~~~aa~~la~------~~~~~~Vvlk-G~~-D~i~dg~~~~~~~~G~~---~~~~ 197 (273)
T 3dzv_A 129 FCQLVSHGRGVDGSPLDQSEEAIEELIQALRQQTQ------KFPQTVFLAT-GIQ-DVLVSQEQVIVLQNGVP---ELDC 197 (273)
T ss_dssp HTTCCCC-------CGGGSHHHHHHHHHHHHHHHH------HSTTCEEEEE-SSS-EEEECSSCEEEECCCCG---GGGS
T ss_pred HhCCcccccccccccccchhhhhHHHHHHHHHHHH------HhCCeEEEEE-CCe-eEEEcCCEEEEeCCCCc---ccCC
Confidence 9885421 11 1 33456666632 223 556666 543 35556666666654321 3456
Q ss_pred CCCcchhhHHHHHHHHhcCCCHHHHHHHHHHH
Q 019402 291 TNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYA 322 (341)
Q Consensus 291 ttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~ 322 (341)
++|.||++.|.+.+.+.+|.++.+|+..|...
T Consensus 198 v~GtGc~Ls~~Iaa~lA~g~~~~~Aa~~A~~~ 229 (273)
T 3dzv_A 198 FTGTGDLVGALVAALLGEGNAPMTAAVAAVSY 229 (273)
T ss_dssp STTHHHHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred cCCchHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 79999999999999999999999998887665
|
| >3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A* | Back alignment and structure |
|---|
Probab=98.84 E-value=1.5e-08 Score=95.43 Aligned_cols=158 Identities=13% Similarity=0.097 Sum_probs=101.6
Q ss_pred HhhhhcceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcC
Q 019402 152 WSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHG 231 (341)
Q Consensus 152 ~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~ 231 (341)
.+.++.+|++++..- +..+......+.+.+++.++++++|+....... .+.+ +..+..++++||..|+..|++...
T Consensus 315 ~~~~~~~davviGpG-lg~~~~~~~~~~~~l~~~~~pvVlDadgl~~l~--~~ll-~~~~~~~vlTPN~~E~~~L~g~~~ 390 (502)
T 3rss_A 315 LELSKDVDVVAIGPG-LGNNEHVREFVNEFLKTLEKPAVIDADAINVLD--TSVL-KERKSPAVLTPHPGEMARLVKKTV 390 (502)
T ss_dssp HHHHTTCSEEEECTT-CCCSHHHHHHHHHHHHHCCSCEEECHHHHHTCC--HHHH-HHCSSCEEECCCHHHHHHHHTCCH
T ss_pred HHHhccCCEEEEeCC-CCCCHHHHHHHHHHHHhcCCCEEEeCcccchhc--HHHH-hccCCCEEEeCCHHHHHHHhCCCc
Confidence 346778999999752 122222333333355667899999986543211 1222 234567899999999999987432
Q ss_pred CC-CCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCC
Q 019402 232 WE-TDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEK 310 (341)
Q Consensus 232 ~~-~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~ 310 (341)
.+ .++ .++++++.+ .. ..+|+..|. +.++++.+..+..+ .. ...++|+|+||+++|.+.+.+++|.
T Consensus 391 ~~~~~d-~~aa~~la~------~~-~~~VvlKG~-~~vi~~~~~~~~~~-~g---~~~~at~GsGD~Lag~iaa~lA~g~ 457 (502)
T 3rss_A 391 GDVKYN-YELAEEFAK------EN-DCVLVLKSA-TTIVTDGEKTLFNI-TG---NTGLSKGGSGDVLTGMIAGFIAQGL 457 (502)
T ss_dssp HHHTTC-HHHHHHHHH------HH-TSEEEECSS-SEEEECSSCEEEEC-CC---CGGGSSTTHHHHHHHHHHHHHHTTC
T ss_pred cchHHH-HHHHHHHHH------Hc-CCEEEEeCC-CeEEEcCCEEEEEC-CC---CCccccCCchHHHHHHHHHHHhCCC
Confidence 11 234 566777632 11 235556665 55666666555433 22 2667999999998888888888999
Q ss_pred CHHHHHHHHHHHHhhh
Q 019402 311 PVEDCVRTGCYAANVV 326 (341)
Q Consensus 311 ~~~~a~~~A~~~aa~~ 326 (341)
++.+|+.+|+..-+..
T Consensus 458 ~~~~Aa~~A~~~hg~A 473 (502)
T 3rss_A 458 SPLEASTVSVYLHGFA 473 (502)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999998776654
|
| >3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A | Back alignment and structure |
|---|
Probab=98.83 E-value=1.9e-07 Score=86.18 Aligned_cols=215 Identities=12% Similarity=0.034 Sum_probs=122.6
Q ss_pred ceEEEecCceeeeEeecCHHHHHHc----CCC----------------------------CC---ceEEecCcccchHHH
Q 019402 5 GILLGMGNPLLDISAVVDEEFLKKY----DIK----------------------------LN---NAILAEDKHLPMYDE 49 (341)
Q Consensus 5 ~~i~~iG~~~~D~~~~~~~~~~~~~----~~~----------------------------~~---~~~~~~~~~~p~~~~ 49 (341)
..|++-=+.++|.+.+++++-++++ +.. .| +..+.+. .+...-.
T Consensus 28 ~~i~~ayN~NVDai~~~~~~~i~~li~~~~~~~v~~~~~~~p~~I~s~~dl~~~~~~~~~~G~aaE~~v~~~-~~~~~~~ 106 (474)
T 3drw_A 28 LSIYTAYNANIAAIVKLNQETIQNLINAFDPDEVKRRIEEYPREINEPIDFVARLVHTLKLGKPAAVPLVNE-KMNEWFD 106 (474)
T ss_dssp CEEEEESCCEEEEEEECCHHHHHHHHHTSCHHHHHHHHHHCCSSBSSHHHHHHHHHHHHHHTCCEEEEECCT-THHHHHH
T ss_pred CceEEEecccEEEEEEcCHHHHHHHHHhcChHHhhhhhhcCCccCCCHHHHHHHHHHHHhCCCceEEecccH-hHHHHHH
Confidence 3788888999999999997544422 211 12 3344433 2222222
Q ss_pred HhccCCceeecCchhHHHHHHHHHHhCCCC-ceEEEEeecCCchhHHHHHHHHhcCCceeE--------ee----cC-CC
Q 019402 50 LASKENVEYIAGGATQNSIKVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSTAAGVNVKY--------YE----DE-SA 115 (341)
Q Consensus 50 ~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~-~v~li~~vG~D~~g~~i~~~l~~~gi~~~~--------~~----~~-~~ 115 (341)
.. ..-...+.||.+.-+|..++. + |. +|.+.++.+.. ...+.| ..+|-.-. +. .. +.
T Consensus 107 ~~-~~~~~~~~GGnA~imAn~La~-l--g~~~Vi~~~p~~sk----~~~~ll-~~~i~~p~~e~g~l~l~~~~ea~~~~~ 177 (474)
T 3drw_A 107 KT-FRYEEERLGGQAGIIANTLAG-L--KIRKVIAYTPFLPK----RLAELF-KKGVLYPVVENGELQFKPIQEAYREGD 177 (474)
T ss_dssp HH-CCCSEEEEESHHHHHHHHHHH-T--TCSEEEECCSCCCH----HHHTTS-CTTEEEEEESSSSEEEEEGGGCCCTTC
T ss_pred Hh-cccceEecCChHHHHHHHHHH-c--CCCcEEEecCcCCH----HHHHhc-CCcceeecccCCceeecCchhhhccCC
Confidence 11 223367899999999999997 3 47 58888876653 334444 22222110 00 00 11
Q ss_pred CcceEE-EEEeCCeec---------------eeecccccc-cCC-cccCCCchhHhhh-hcceEEEEeccccccC-----
Q 019402 116 PTGTCA-VCVVGGERS---------------LVANLSAAN-CYK-SEHLKRPEIWSIV-EKAKYYYIAGFFLTVS----- 171 (341)
Q Consensus 116 ~t~~~~-~~~~~g~~~---------------~~~~~~~~~-~~~-~~~~~~~~~~~~~-~~~~~v~i~~~~~~~~----- 171 (341)
+.-.-+ +.+..|++. ++.....+. .+. .+.+. +..+.+ +.+|.++++|+.+...
T Consensus 178 ~~~iH~I~Ey~~G~~~~~~~~~~~aPraNRfI~s~D~~N~~~l~~~e~f~--~~l~e~~~~~d~~vLSGlq~m~~~y~dg 255 (474)
T 3drw_A 178 PLKINRIFEFRKGLKFKLGDETIEIPNSGRFIVSARFESISRIETREDIK--PFLGEIGKEVDGAIFSGYQGLRTKYSDG 255 (474)
T ss_dssp CCCEEEEEEECTTCEEESSSCEEECCSCEEEEEEECCSGGGCCSCCTTTG--GGHHHHHHHCSEEEECCGGGCCSBCTTS
T ss_pred CCCcEEEEEcCCCCeeecCCceEEccCCCeEEEEcCCCCHHhccccHHHH--HHHHHhhcCCCEEEEecccccccccccc
Confidence 122222 222234432 222222221 111 11111 122333 4799999999985333
Q ss_pred ---H---HHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcC
Q 019402 172 ---P---ESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHG 231 (341)
Q Consensus 172 ---~---~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~ 231 (341)
. +...+.++..+..+.++.+++.+....+.....+..+++++|.+-+|++|+..+....+
T Consensus 256 ~~~~~~l~~~~e~i~~l~~~~~~iH~E~As~~~~~l~~~i~~~i~p~vDSlGmNEqELa~l~~~lg 321 (474)
T 3drw_A 256 KDANYYLRRAKEDIIEFKEKDVKIHVEFASVQDRKLRKKIITNILPFVDSVGIDEAEIAQILSVLG 321 (474)
T ss_dssp CBHHHHHHHHHHHHHHHHHTTCEEEEECCCCSCHHHHHHHHHHTGGGSSEEEEEHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHHhcCCCCeEEEEeCccccHHHHHHHHHHhcccccccccCHHHHHHHHHHhc
Confidence 1 22335556666789999999987665555666777899999999999999999987643
|
| >3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A | Back alignment and structure |
|---|
Probab=98.72 E-value=2.7e-08 Score=86.69 Aligned_cols=144 Identities=16% Similarity=0.122 Sum_probs=95.3
Q ss_pred hhcceEEEEeccccccCH-HHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhC---CCCcEEEcCHHHHHHHHhhc
Q 019402 155 VEKAKYYYIAGFFLTVSP-ESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKAL---PYMDYVFGNETEARTFAKVH 230 (341)
Q Consensus 155 ~~~~~~v~i~~~~~~~~~-~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l---~~~dil~~n~~E~~~l~~~~ 230 (341)
++++|++++.+ .+.. +...++++.+.+.+.++++|...... +.+ ...++++||..|++.|++..
T Consensus 96 l~~~davviGP---Glg~~~~~~~~~~~~l~~~~p~VlDAdal~~---------~~l~~~~~~~vlTPN~~E~~~L~g~~ 163 (279)
T 3rpz_A 96 EETYRAIAIGP---GLPQTESVQQAVDHVLTADCPVILDAGALAK---------RTYPKREGPVILTPHPGEFFRMTGVP 163 (279)
T ss_dssp SSCCSEEEECT---TCCCCHHHHHHHHHHTTSSSCEEECGGGCCS---------CCCCCCSSCEEECCCHHHHHHHHCCC
T ss_pred ccCCCEEEECC---CCCCCHHHHHHHHHHHhhCCCEEEECCccch---------hhhhhccCCEEEecCHHHHHHHhCCC
Confidence 46789999975 3332 34566777777788899999865431 222 34689999999999998743
Q ss_pred CCC-CCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcC
Q 019402 231 GWE-TDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE 309 (341)
Q Consensus 231 ~~~-~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g 309 (341)
..+ .++..++++++.+ .. ..+|+-.|. +.++++.+..+.+..... ...++.|+||++++.+...+.+|
T Consensus 164 ~~~~~~d~~~aa~~la~------~~-~~~VvlKG~-~~vi~~~~g~~~~~~~g~---~~~at~GtGD~Lag~iaa~lA~g 232 (279)
T 3rpz_A 164 VNELQKKRAEYAKEWAA------QL-QTVIVLKGN-QTVIAFPDGDCWLNPTGN---GALAKGGTGDTLTGMILGMLCCH 232 (279)
T ss_dssp HHHHTTSHHHHHHHHHH------HH-TSEEEECST-TCEEECTTSCEEECCCCC---GGGCSTTHHHHHHHHHHHHHHHC
T ss_pred ccchHHHHHHHHHHHHH------Hc-CeEEEEeCC-CcEEECCCceEEEeCCCC---CCCCCCChHHHHHHHHHHHHHCC
Confidence 211 2456667777742 11 224555565 455665553333332222 56789999998766666667899
Q ss_pred CCHHHHHHHHHH
Q 019402 310 KPVEDCVRTGCY 321 (341)
Q Consensus 310 ~~~~~a~~~A~~ 321 (341)
.++.+|+..|..
T Consensus 233 ~~~~~A~~~a~~ 244 (279)
T 3rpz_A 233 EDPKHAVLNAVY 244 (279)
T ss_dssp SSHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 999999999875
|
| >1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3 | Back alignment and structure |
|---|
Probab=98.46 E-value=4.1e-06 Score=77.51 Aligned_cols=163 Identities=11% Similarity=0.009 Sum_probs=92.7
Q ss_pred ecCchhHHHHHHHHHHhCCCCceEE--EEeecCCchhHHHHHHHHhcCCceeEee------------cCCCCcceEE-EE
Q 019402 59 IAGGATQNSIKVAQWMLQIPGATSY--IGCIGKDKFGEEMKKNSTAAGVNVKYYE------------DESAPTGTCA-VC 123 (341)
Q Consensus 59 ~~GG~~~n~a~~l~~l~~lg~~v~l--i~~vG~D~~g~~i~~~l~~~gi~~~~~~------------~~~~~t~~~~-~~ 123 (341)
+.||.+..+|..++. +|.++.+ ++.+|. ...+.|...+|..-.+. ....+....+ +.
T Consensus 109 ~~GGnA~imAn~la~---lg~~~vl~~~~~l~~-----~~~~lf~~~~i~~p~~~~~~~~l~~~~e~~~~~~~~iH~I~E 180 (455)
T 1ua4_A 109 RMGGQAGIMANLLGG---VYGVPVIVHVPQLSR-----LQANLFLDGPIYVPTLENGEVKLIHPKEFSGDEENCIHYIYE 180 (455)
T ss_dssp EEESHHHHHHHHHTT---TTCCCEEECCSCCCH-----HHHTTSCSSSEEEEEEETTEEEEECGGGCSCCCCCCEEEEEE
T ss_pred ccCCcHHHHHHHHHH---cCCCEEEEeCCCCCH-----HHHHhcCCCCeEeecccCCccccccchhhccCCCCCceEEEE
Confidence 999999998888876 4588877 666554 34555542233330010 0122223333 33
Q ss_pred EeCCeece-eecccccc-----cCCcccCCC-chhHhhhh----cceEEEEeccccccCH---HHHHHHHH---HHHhcC
Q 019402 124 VVGGERSL-VANLSAAN-----CYKSEHLKR-PEIWSIVE----KAKYYYIAGFFLTVSP---ESIQMVAE---HAAAKN 186 (341)
Q Consensus 124 ~~~g~~~~-~~~~~~~~-----~~~~~~~~~-~~~~~~~~----~~~~v~i~~~~~~~~~---~~~~~~~~---~~~~~~ 186 (341)
+.+|++.. +..+.+|+ ......+.. +++.+.+. ++|.+.++|+.+.-.. +.....++ .....+
T Consensus 181 f~~G~~~~~~~aPraNRfI~s~D~~n~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~~~~~~~~~~l~~i~~L~~~~ 260 (455)
T 1ua4_A 181 FPRGFRVFEFEAPRENRFIGSADDYNTTLFIREEFRESFSEVIKNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNERE 260 (455)
T ss_dssp ECTTCEETTEECSSCEEEEEECCSSGGGTCCCGGGSTTHHHHGGGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCeecceeccccceeEEecCCCcccCcccHHHHHHHHhhccCCcEEEEechhcccccchHHHHHHHHHHHHHhcCCC
Confidence 34565432 11111111 111112211 22333444 4999999999852221 22222222 346677
Q ss_pred CeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhc
Q 019402 187 KVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVH 230 (341)
Q Consensus 187 ~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~ 230 (341)
.++.+++.+....+.....+ .+++++|.+-+|++|+..+....
T Consensus 261 ~~iH~ElAs~~~~~~~~~i~-~ilp~vDSlGmNE~EL~~l~~~l 303 (455)
T 1ua4_A 261 IPVHLEFAFTPDEKVREEIL-NVLGMFYSVGLNEVELASIMEIL 303 (455)
T ss_dssp CCEEEECCCCCCHHHHHHHH-HHGGGCSEEEECHHHHHHHHHHT
T ss_pred ceEEEEeCCccCHHHHHHHH-hhhccCcccccCHHHHHHHHHHh
Confidence 89999998766555556666 89999999999999999887754
|
| >3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=4.5e-06 Score=79.33 Aligned_cols=162 Identities=12% Similarity=0.066 Sum_probs=104.8
Q ss_pred hhHhhhhc-ceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCC--CCcEEEcCHHHHHHH
Q 019402 150 EIWSIVEK-AKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP--YMDYVFGNETEARTF 226 (341)
Q Consensus 150 ~~~~~~~~-~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~--~~dil~~n~~E~~~l 226 (341)
+..+..+. ++.+++..-.+.- .+.+..+++.+++.++++++||-.-.......+...++++ ..++|.+|..|+..|
T Consensus 298 E~~e~~~~~~~alvin~G~l~~-~~~~~~a~~~a~~~~~PvVlDPVg~~a~~~r~~~~~~Ll~~~~~~vItpN~~E~~~L 376 (540)
T 3nl6_A 298 EVNDLAAIPHATLLLNTGSVAP-PEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGL 376 (540)
T ss_dssp HHHHHTTSTTCEEEEESSCSCC-HHHHHHHHHHHHTTTCCEEEECTTCTTSHHHHHHHHHHTTSCCCSEEEECHHHHHHH
T ss_pred HHHHHHhccCCeEEEeCCCCCH-HHHHHHHHHHHHHcCCCEEEChHHhhcccccHHHHHHHHhhCCCeEECCCHHHHHHH
Confidence 44556676 8999997654432 6788888888999999999999543222222344567776 789999999999999
Q ss_pred HhhcC-----CC------CCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeC-------------------CeEE
Q 019402 227 AKVHG-----WE------TDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAED-------------------GKVK 276 (341)
Q Consensus 227 ~~~~~-----~~------~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~-------------------~~~~ 276 (341)
++... .+ .++..++++.+.+ +....|++| |+. -+++++ +..+
T Consensus 377 ~g~~~~~~~GVds~~~~~~~d~~~aA~~lA~------~~~~vVvlk-G~~-D~I~dg~~~~~~~~~~~~~~~~~~~~~~~ 448 (540)
T 3nl6_A 377 AELNKERMKGVDASSGISNELLIQATKIVAF------KYKTVAVCT-GEF-DFIADGTIEGKYSLSKGTNGTSVEDIPCV 448 (540)
T ss_dssp TTC--------------CCHHHHHHHHHHHH------HTTSEEEEC-SSS-EEEEECCGGGBCCSSSCCSSCCTTSSCEE
T ss_pred hCCCcccccccccccccCHHHHHHHHHHHHH------HhCCEEEEc-CCC-eEEECCCccccccccccccccccCCccEE
Confidence 87431 11 1334456666643 122344454 653 344555 4566
Q ss_pred EEecccCCCCcccCCCCcchhhHHHHHHHHhcCC---CHHHHHHHHHHH
Q 019402 277 LFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEK---PVEDCVRTGCYA 322 (341)
Q Consensus 277 ~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~---~~~~a~~~A~~~ 322 (341)
.++.-.++ -.-.++|.||++.+.+.+.+.++. ++.+|+..|...
T Consensus 449 ~~~~G~~~--~m~~vtGtGc~Lsg~Iaa~la~~~~~~~~~~Aa~~a~~~ 495 (540)
T 3nl6_A 449 AVEAGPIE--IMGDITASGCSLGSTIACMIGGQPSEGNLFHAVVAGVML 495 (540)
T ss_dssp EEECSCCG--GGGSSTTHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHH
T ss_pred EECCCChh--hccCccCchHHHHHHHHHHHhcCcCCCCHHHHHHHHHHH
Confidence 66533211 223469999999999888888887 577777666543
|
| >3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.41 E-value=3.2e-06 Score=72.60 Aligned_cols=159 Identities=14% Similarity=0.040 Sum_probs=94.3
Q ss_pred hhHhhhhcceEEEEecccccc-CHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhC-CCCcEEEcCHHHHHHHH
Q 019402 150 EIWSIVEKAKYYYIAGFFLTV-SPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKAL-PYMDYVFGNETEARTFA 227 (341)
Q Consensus 150 ~~~~~~~~~~~v~i~~~~~~~-~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l-~~~dil~~n~~E~~~l~ 227 (341)
|..+..+.++.+++.--++.. ..+.+....+.+.+.++|+++||-+-.......+...+++ .+.++|.+|..|...|.
T Consensus 49 E~~e~~~~a~al~iNiGtl~~~~~~~m~~A~~~A~~~~~PvVLDPVg~gas~~R~~~~~~ll~~~~~vIrgN~sEi~~L~ 128 (265)
T 3hpd_A 49 ELEEMIRLADAVVINIGTLDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISALL 128 (265)
T ss_dssp THHHHHHHCSEEEEECTTCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHHH
T ss_pred HHHHHHHHCCeEEEECCCCChHHHHHHHHHHHHHHHcCCCEEEcCCCCCCcHHHHHHHHHHHhcCCcEEcCCHHHHHHHh
Confidence 345667788889986543311 1245666778888999999999954221111112233332 25899999999999998
Q ss_pred hhcCC----C-----CCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhh
Q 019402 228 KVHGW----E-----TDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAF 298 (341)
Q Consensus 228 ~~~~~----~-----~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf 298 (341)
+.... + .++..++++.+.+. .+ ..|++| |+ .-++.+++..+.++.-.. -.-..+|.||+.
T Consensus 129 g~~~~~~gvds~~~~~~d~~~~a~~lA~~-----~~-~vVvlk-G~-~d~I~dg~~~~~~~~G~~---~m~~vtGtGc~L 197 (265)
T 3hpd_A 129 GEEGKTRGVDSLEYGEEEAKKLTMNAARE-----FN-TTVAVT-GA-VDYVSDGRRTFAVYNGHE---LLGRVTGTGCMV 197 (265)
T ss_dssp HHHC----------CHHHHHHHHHHHHHH-----TT-SEEEEE-SS-SEEEECSSCEEEECCCCG---GGGGSTTHHHHH
T ss_pred cccCCCCCccCccccHHHHHHHHHHHHHH-----hC-CEEEEe-CC-CeEEEcCCEEEEECCCCh---HhhcCCccchHH
Confidence 75432 1 12344566666421 12 344454 65 456666666666653211 222348999998
Q ss_pred HHHHHHHHhcCCCHHHHHHHHH
Q 019402 299 VGGFLSQLVQEKPVEDCVRTGC 320 (341)
Q Consensus 299 ~a~~~~~l~~g~~~~~a~~~A~ 320 (341)
.|.+.+.+.++ +..+|...|.
T Consensus 198 sg~iaa~lA~~-~~~~Aa~~a~ 218 (265)
T 3hpd_A 198 AALTGAFVAVT-EPLKATTSAL 218 (265)
T ss_dssp HHHHHHHHTTS-CHHHHHHHHH
T ss_pred HHHHHHHHhcC-ChHHHHHHHH
Confidence 77666666777 4445555544
|
| >1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3 | Back alignment and structure |
|---|
Probab=98.28 E-value=2.4e-05 Score=72.36 Aligned_cols=163 Identities=10% Similarity=-0.015 Sum_probs=91.6
Q ss_pred ecCchhHHHHHHHHHHhCCCCceEE--EEeecCCchhHHHHHHHHhcCCceeEeec------------CCCCcceEE-EE
Q 019402 59 IAGGATQNSIKVAQWMLQIPGATSY--IGCIGKDKFGEEMKKNSTAAGVNVKYYED------------ESAPTGTCA-VC 123 (341)
Q Consensus 59 ~~GG~~~n~a~~l~~l~~lg~~v~l--i~~vG~D~~g~~i~~~l~~~gi~~~~~~~------------~~~~t~~~~-~~ 123 (341)
+.||.+.-+|..++. + |.++.+ ++.+ |+...+.|...+|.+-.+.. .+.+.-.-+ ..
T Consensus 117 ~mGGnAgimAn~la~-l--g~~~vl~~~~~~-----s~~~~~l~~~~~i~~p~~~~g~l~~~~~~ea~~~~~~~iH~I~E 188 (467)
T 1gc5_A 117 RIGGQAGIMANLLGG-V--YRIPTIVHVPQN-----PKLQAELFVDGPIYVPVFEGNKLKLVHPKDAIAEEEELIHYIYE 188 (467)
T ss_dssp EEESHHHHHHHHHHH-T--SCCCEEECCSCC-----CHHHHTTSCSSSEEEEEECSSCEEEECGGGSCCSCCCCEEEEEE
T ss_pred ccCccHHHHHHHHHh-c--CCCEEEEcCCCC-----CHHHHHhcCCCCeeeeeccCCceecccchhhccCCCCcceEEEE
Confidence 999999999999887 3 477776 4544 44455555433333211100 012222222 22
Q ss_pred EeCCeece-eecccccccCCc-----ccCCC-chhHhhhh----cceEEEEeccccccC-------H-H---HHHHHHHH
Q 019402 124 VVGGERSL-VANLSAANCYKS-----EHLKR-PEIWSIVE----KAKYYYIAGFFLTVS-------P-E---SIQMVAEH 181 (341)
Q Consensus 124 ~~~g~~~~-~~~~~~~~~~~~-----~~~~~-~~~~~~~~----~~~~v~i~~~~~~~~-------~-~---~~~~~~~~ 181 (341)
+..|.+.. +..+.+|+.+-. ..+.. +++.+.+. ++|.++++|+.+.-. . + .+.+.++.
T Consensus 189 y~~G~~~~~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~y~~g~~~~~~l~~~~~~l~~ 268 (467)
T 1gc5_A 189 FPRGFQVFDVQAPRENRFIANADDYNARVYMRREFREGFEEITRNVELAIISGLQVLKEYYPDGTTYKDVLDRVESHLNI 268 (467)
T ss_dssp ECSSCEETTEECSSCEEEEEECCSSTTTTCCCHHHHHSHHHHHTTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHH
T ss_pred cCCCCeecceeccCCceEEEecCCCCccccccHHHHHHHHhhccCCCEEEEechhcccCccCCchhHHHHHHHHHHHHHh
Confidence 23454421 111222221111 01111 23334444 499999999985222 1 2 22333333
Q ss_pred HHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhc
Q 019402 182 AAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVH 230 (341)
Q Consensus 182 ~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~ 230 (341)
....++++.+++.+....+.....+ .+++++|.+-+|++|+..+....
T Consensus 269 l~~~~~~iH~E~As~~~~~l~~~i~-~ilp~vDSlGmNEqELa~l~~~l 316 (467)
T 1gc5_A 269 LNRYNVKSHFEFAYTANRRVREALV-ELLPKFTSVGLNEVELASIMEII 316 (467)
T ss_dssp HHHTTCEEEEECCCCCCHHHHHHHH-HHGGGCSEEEECHHHHHHHHHHT
T ss_pred hcCCCCeEEEEECCcccHHHHHHHH-hhccccccCccCHHHHHHHHHHc
Confidence 3557889999998766555566667 89999999999999998666543
|
| >1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3 | Back alignment and structure |
|---|
Probab=98.24 E-value=9.4e-06 Score=74.90 Aligned_cols=74 Identities=14% Similarity=-0.036 Sum_probs=54.3
Q ss_pred hcceEEEEeccccccC---HH---HHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhh
Q 019402 156 EKAKYYYIAGFFLTVS---PE---SIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKV 229 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~---~~---~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~ 229 (341)
.++|.++++|+.+.-. +. ...+.++.....++++.+++.+....+.....+ .+++++|.+-+|++|+..+...
T Consensus 227 ~~~d~~vlSG~q~l~~~~~~~~~~~~~~~i~~L~~~~~~iH~E~As~~~~~l~~~i~-~ilp~vDSlGmNEqELa~l~~~ 305 (457)
T 1l2l_A 227 KRSELAIISGLHPLTQENHGKPIKLVREHLKILNDLGIRAHLEFAFTPDEVVRLEIV-KLLKHFYSVGLNEVELASVVSV 305 (457)
T ss_dssp TTCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHHTTCEEEEECCCCSSHHHHHHHH-HHGGGCSEEEECHHHHHHHHHH
T ss_pred cCCCEEEEeccccccccchhhhHHHHHHHHHHhcCCCCeEEEEECCcccHHHHHHHH-hhccccccCccCHHHHHHHHHH
Confidence 4499999999985333 22 233333444678899999998766555566667 8999999999999999886544
Q ss_pred c
Q 019402 230 H 230 (341)
Q Consensus 230 ~ 230 (341)
.
T Consensus 306 l 306 (457)
T 1l2l_A 306 M 306 (457)
T ss_dssp T
T ss_pred c
Confidence 3
|
| >3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00048 Score=64.30 Aligned_cols=148 Identities=20% Similarity=0.182 Sum_probs=89.0
Q ss_pred hcceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCC---
Q 019402 156 EKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGW--- 232 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~--- 232 (341)
.+.|.+.+.+- +..+...+..++ . .. ++++|-..... . .+.+.++...|+.||..|+..|++..+.
T Consensus 291 ~~~~a~~iGPG-lG~~~~~l~~~l---~-~~-p~VlDADaL~~----~-~~~~~~~~~~VlTPh~~E~~rL~g~~~~~v~ 359 (475)
T 3k5w_A 291 NLLSAFALGMG-LENIPKDFNRWL---E-LA-PCVLDAGVFYH----K-EILQALEKEAVLTPHPKEFLSLLNLVGINIS 359 (475)
T ss_dssp SSCSEEEECTT-CSSCCTTHHHHH---H-HS-CEEEEGGGGGS----G-GGGTTTTSSEEEECCHHHHHHHHHHTSCCCC
T ss_pred cCCCEEEEcCC-CCCCHHHHHHHH---h-cC-CEEEECcccCC----c-hhhhccCCCEEECCCHHHHHHHhCCccCCCC
Confidence 57888888752 222221133333 2 34 89999754321 1 1223445568999999999999986221
Q ss_pred --C-CCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcC
Q 019402 233 --E-TDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE 309 (341)
Q Consensus 233 --~-~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g 309 (341)
+ .++..++++++.+. .+..+|++| |.. .+++.++..+..+.- . .-..+.|.||++++.+.+.+++|
T Consensus 360 ~~~~~~d~~~aa~~la~~-----~g~~~VvlK-G~~-~vI~~~~~~~~~~~g-~---~~mat~GtGdvLsg~Iaa~lA~g 428 (475)
T 3k5w_A 360 MLELLDNKLEIARDFSQK-----YPKVVLLLK-GAN-TLIAHQGQVFINILG-S---VALAKAGSGDVLAGLILSLLSQN 428 (475)
T ss_dssp TTSGGGSCC--CHHHHHH-----CTTEEEEEC-SSS-EEEEETTEEEEECCC-C---GGGCSTTHHHHHHHHHHHHHHTT
T ss_pred cchhHHHHHHHHHHHHHH-----cCCeEEEEe-CCC-CEEECCCEEEEECCC-C---CCCCCCCHHHHHHHHHHHHHHcC
Confidence 1 12334555655321 112344454 553 455566666554421 1 44578999999999999999999
Q ss_pred CCHHHHHHHHHHHHhh
Q 019402 310 KPVEDCVRTGCYAANV 325 (341)
Q Consensus 310 ~~~~~a~~~A~~~aa~ 325 (341)
.++.+|+..|...-+.
T Consensus 429 ~~~~~Aa~~a~~lhg~ 444 (475)
T 3k5w_A 429 YTPLDAAINASLAHAL 444 (475)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 9999988877655443
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 341 | ||||
| d1bx4a_ | 342 | c.72.1.1 (A:) Adenosine kinase {Human (Homo sapien | 6e-70 | |
| d2absa1 | 350 | c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma g | 2e-54 | |
| d2afba1 | 333 | c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase | 1e-28 | |
| d1vk4a_ | 288 | c.72.1.1 (A:) Hypothetical protein TM0415 {Thermot | 4e-19 | |
| d2ajra1 | 319 | c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {T | 5e-18 | |
| d1rkda_ | 306 | c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: | 9e-18 | |
| d2f02a1 | 313 | c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase Lac | 1e-17 | |
| d2abqa1 | 306 | c.72.1.1 (A:1-306) Fructose 1-phosphate kinase Fru | 2e-16 | |
| d2fv7a1 | 308 | c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapien | 3e-15 | |
| d1v19a_ | 302 | c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Ther | 4e-15 | |
| d2dcna1 | 308 | c.72.1.1 (A:2-309) Hypothetical fructokinase ST247 | 1e-14 | |
| d1vm7a_ | 299 | c.72.1.1 (A:) Ribokinase {Thermotoga maritima [Tax | 3e-14 | |
| d1tyya_ | 304 | c.72.1.1 (A:) Aminoimidazole riboside kinase {Salm | 4e-12 | |
| d1vi9a_ | 288 | c.72.1.5 (A:) Pyridoxamine kinase {Escherichia col | 1e-07 | |
| d1lhpa_ | 309 | c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) | 0.003 |
| >d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Adenosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 220 bits (559), Expect = 6e-70
Identities = 192/340 (56%), Positives = 254/340 (74%), Gaps = 2/340 (0%)
Query: 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGA 63
E IL GMGNPLLDISAVVD++FL KY +K N+ ILAEDKH ++DEL K VEY AGG+
Sbjct: 3 ENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGS 62
Query: 64 TQNSIKVAQWMLQIP-GATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAV 122
TQNSIKVAQWM+Q P A ++ GCIG DKFGE +K+ + A V+ YYE PTGTCA
Sbjct: 63 TQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAA 122
Query: 123 CVVGGERSLVANLSAANCYKS-EHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEH 181
C+ G RSL+ANL+AANCYK +HL + W +VEKA+ YIAGFFLTVSPES+ VA H
Sbjct: 123 CITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLKVAHH 182
Query: 182 AAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIA 241
A+ N++F +NLSAPFI +F++E K +PY+D +FGNETEA TFA+ G+ET +++EIA
Sbjct: 183 ASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEIA 242
Query: 242 LKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGG 301
K PK + +RI + TQG D ++A + +V F V+ +++++DTNGAGDAFVGG
Sbjct: 243 KKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGG 302
Query: 302 FLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
FLSQLV +KP+ +C+R G YAA+++I+R+GCT+P KP+F+
Sbjct: 303 FLSQLVSDKPLTECIRAGHYAASIIIRRTGCTFPEKPDFH 342
|
| >d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Adenosine kinase species: Toxoplasma gondii [TaxId: 5811]
Score = 180 bits (456), Expect = 2e-54
Identities = 103/348 (29%), Positives = 165/348 (47%), Gaps = 24/348 (6%)
Query: 7 LLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQN 66
+ +GNP+LD+ A V FL ++ +K +A LA + + +Y L + N + GG+ N
Sbjct: 6 VFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTL-DQFNPTSLPGGSALN 64
Query: 67 SIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVG 126
S++V Q +L+ PG+ Y+G IG D G+ +K+ G+ ++ TG CAV +
Sbjct: 65 SVRVVQKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINE 124
Query: 127 GERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMV-AEHAAAK 185
ER+L + + + A +Y + LT +P++ V
Sbjct: 125 KERTLCTH----LGACGSFRLPEDWTTFASGALIFYATAYTLTATPKNALEVAGYAHGIP 180
Query: 186 NKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKIS 245
N +F +NLSAPF E +++ + L + + +FGNE E AKVH ++
Sbjct: 181 NAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKTALSTANK 240
Query: 246 Q-------------WPKASGTHKRITVITQGADPVVVAEDGK-----VKLFPVILLPKEK 287
+ + + ++ V+T+G +PV+ AE V V ++ EK
Sbjct: 241 EHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEK 300
Query: 288 LVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCTYP 335
+VDTNGAGDAFVGGFL L Q K V+ C+ G A VIQ G +
Sbjct: 301 IVDTNGAGDAFVGGFLYALSQGKTVKQCIMCGNACAQDVIQHVGFSLS 348
|
| >d2afba1 c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase {Thermotoga maritima, TM0067 [TaxId: 2336]} Length = 333 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: 2-keto-3-deoxygluconate kinase species: Thermotoga maritima, TM0067 [TaxId: 2336]
Score = 111 bits (277), Expect = 1e-28
Identities = 46/314 (14%), Positives = 104/314 (33%), Gaps = 25/314 (7%)
Query: 45 PMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAG 104
P + + ++ + GGA N VA ++ Q+ ++ + + G+ + G
Sbjct: 19 PDHKRIFQTDSFDVTYGGAEAN---VAAFLAQMGLDAYFVTKLPNNPLGDAAAGHLRKFG 75
Query: 105 VNVKYYEDESAPTGTCAVCVVGGER-SLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYI 163
V Y G + + +R S V A + + + I++ A++++
Sbjct: 76 VKTDYIARGGNRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFDWEKILDGARWFHF 135
Query: 164 AGFFLTVSPESIQMV------AEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVF 217
+G + E ++ A + + + E ++ + Y+D +
Sbjct: 136 SGITPPLGKELPLILEDALKVANEKGVTVSCDLNYRARLWTKEEAQKVMIPFMEYVDVLI 195
Query: 218 GNETEARTFAKVHGW---------ETDNVEEIALKISQWPKASG---THKRITVITQGAD 265
NE + + + +IA ++++ T + T
Sbjct: 196 ANEEDIEKVLGISVEGLDLKTGKLNREAYAKIAEEVTRKYNFKTVGITLRESISATVNYW 255
Query: 266 PVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANV 325
V+V E+G+ + +VD GAGD+F G + + + A+ +
Sbjct: 256 SVMVFENGQPHFSNR---YEIHIVDRVGAGDSFAGALIYGSLMGFDSQKKAEFAAAASCL 312
Query: 326 VIQRSGCTYPPKPE 339
G E
Sbjct: 313 KHTIPGDFVVLSIE 326
|
| >d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Hypothetical protein TM0415 species: Thermotoga maritima [TaxId: 2336]
Score = 83.9 bits (206), Expect = 4e-19
Identities = 38/287 (13%), Positives = 70/287 (24%), Gaps = 26/287 (9%)
Query: 46 MYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGV 105
D E GG A + T I ++ + GV
Sbjct: 16 SKDVNVVDGKREIAYGGGVVM---GAITSSLLGVKTKVITKCTREDVSK--FSFLRDNGV 70
Query: 106 NVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAG 165
V + + + R SAA+ + L E ++ G
Sbjct: 71 EVVFLKSPRTTSIENRYGSDPDTRESFLI-SAADPFTESDLAFIEGEAVHI---NPLWYG 126
Query: 166 FFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEART 225
F ++ +A + F+ + E +EK L Y+D + EA T
Sbjct: 127 EFPEDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLKYLDLFKVDSREAET 186
Query: 226 FAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPK 285
+ + + +
Sbjct: 187 LTGTNDLRESCRIIRSFGAKIILATHASGVIVFDGNFYEASF----------------RS 230
Query: 286 EKLVDTNGAGDAFVGGFL-SQLVQEKPVEDCVRTGCYAANVVIQRSG 331
L G GD FL + ++ +E + +V ++ G
Sbjct: 231 WSLEGRTGRGDTCTAAFLVGFVFKKMSIEKATKFAAAVTSVKMRHPG 277
|
| >d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Putative sugar kinase TM0828 species: Thermotoga maritima [TaxId: 2336]
Score = 81.2 bits (199), Expect = 5e-18
Identities = 39/334 (11%), Positives = 88/334 (26%), Gaps = 38/334 (11%)
Query: 12 NPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVA 71
NP LD +++ + + + GG N V+
Sbjct: 8 NPALDREIFIED-------------FQVNRLY-----RINDLSKTQMSPGGKGIN---VS 46
Query: 72 QWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKY-YEDESAPTGTCAVCVV-GGER 129
+ ++ + G +G G+ + + + + T + +
Sbjct: 47 IALSKLGVPSVATGFVGGY-MGKILVEELRKISKLITTNFVYVEGETRENIEIIDEKNKT 105
Query: 130 SLVANLSAANCYKSEHLK-RPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKV 188
N + + + K I+G E + E +
Sbjct: 106 ITAINFPGPDVTDMDVNHFLRRYKMTLSKVDCVVISGSIPPGVNEG--ICNELVRLARER 163
Query: 189 FMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWP 248
+ R + P + +F V D+ ++A K+++
Sbjct: 164 GVFVFVEQTPRLLERIYEGPEFPNV-VKPDLRGNHASFLGVDLKTFDDYVKLAEKLAEK- 221
Query: 249 KASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLV- 307
+ V + + +V +G + + GAGDA+V G + +
Sbjct: 222 -----SQVSVVSYEVKNDIVATREGVWLIRSK---EEIDTSHLLGAGDAYVAGMVYYFIK 273
Query: 308 QEKPVEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
+ + G +A +R P
Sbjct: 274 HGANFLEMAKFGFASALAATRRKEKYMPDLEAIK 307
|
| >d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]} Length = 306 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Escherichia coli [TaxId: 562]
Score = 80.2 bits (196), Expect = 9e-18
Identities = 58/290 (20%), Positives = 107/290 (36%), Gaps = 21/290 (7%)
Query: 43 HLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTA 102
P E + + + GG N A + ++I C G D GE +++
Sbjct: 20 SFPTPGETVTGNHYQVAFGGKGAN---QAVAAGRSGANIAFIACTGDDSIGESVRQQLAT 76
Query: 103 AGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYY 162
+++ + A+ V GE N+ + + L + + E+
Sbjct: 77 DNIDITPVSVIKGESTGVALIFVNGEGE---NVIGIHAGANAALSPALVEAQRERIANAS 133
Query: 163 IAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETE 222
L ES+ A+ A + +N RE ++ L +D + NETE
Sbjct: 134 ALLMQLESPLESVMAAAKIAHQNKTIVALN------PAPARELPDELLALVDIITPNETE 187
Query: 223 ARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVIL 282
A + ++ + R +IT G+ V + +G+ + P
Sbjct: 188 AEKLTGIRVENDEDAAKA------AQVLHEKGIRTVLITLGSRGVWASVNGEGQRVPG-- 239
Query: 283 LPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGC 332
+ + VDT AGD F G ++ L++EKP+ + +R AA + + R G
Sbjct: 240 -FRVQAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTRKGA 288
|
| >d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Tagatose-6-phosphate kinase LacC species: Enterococcus faecalis [TaxId: 1351]
Score = 80.5 bits (197), Expect = 1e-17
Identities = 43/330 (13%), Positives = 95/330 (28%), Gaps = 37/330 (11%)
Query: 12 NPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVA 71
NP +DIS ++D HL + D + V GG N V
Sbjct: 8 NPSIDISYLLD--------------------HLKL-DTVNRTSQVTKTPGGKGLN---VT 43
Query: 72 QWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSL 131
+ + + G G +G G + A + + + T + G ++
Sbjct: 44 RVIHDLGGDVIATGVLGGF-HGAFIANELKKANIPQAFTSIKE-ETRDSIAILHEGNQTE 101
Query: 132 VANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMM 191
+ + ++++A+ I+G P A +V +
Sbjct: 102 ILEAGPTVSPEEISNFLENFDQLIKQAEIVTISGSLAKGLPSDFYQELVQKAHAQEVKV- 160
Query: 192 NLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKAS 251
+ + + + L + + + G + A++ +
Sbjct: 161 ------LLDTSGDSLRQVLQGPWKPYLIKPNLEELEGLLGQDFSENPLAAVQTALTKPMF 214
Query: 252 GTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKP 311
+ I + + D ++ P + + G+GDA + G L ++ P
Sbjct: 215 AGIEWIVISLGKDGAIAKHHDQFYRVKI----PTIQAKNPVGSGDATIAGLAYGLAKDAP 270
Query: 312 VEDCVRTGCYAANVVIQRSGCTYPPKPEFN 341
+ ++ G A Q +
Sbjct: 271 AAELLKWGMAAGMANAQERMTGHVDVENVK 300
|
| >d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} Length = 306 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Fructose 1-phosphate kinase FruB species: Bacillus halodurans [TaxId: 86665]
Score = 76.6 bits (187), Expect = 2e-16
Identities = 48/321 (14%), Positives = 97/321 (30%), Gaps = 45/321 (14%)
Query: 12 NPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVA 71
NP +D V+ + + E GG N V+
Sbjct: 8 NPSIDYIVQVE--------------------NFQ-QGVVNRSERDRKQPGGKGIN---VS 43
Query: 72 QWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSL 131
+ + ++ T +G +G G ++ + + + E T + G++
Sbjct: 44 RVLKRLGHETKALGFLGGF-TGAYVRNALEKEEIGLSFIEV---EGDTRINVKIKGKQET 99
Query: 132 VANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFLTVSPESI-QMVAEHAAAKNKVFM 190
N +A K E + +EK +AG P++I + + + A +
Sbjct: 100 ELNGTAPLIKKEHVQALLEQLTELEKGDVLVLAGSVPQAMPQTIYRSMTQIAKERGAFVA 159
Query: 191 MNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKA 250
++ S + E P + ++ + + ++ A
Sbjct: 160 VDTSGEALHEVLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQRLIGEGIESILVSFA 219
Query: 251 SGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEK 310
+ V P ++ ++ GAGD+ V GFL+ L + K
Sbjct: 220 GDGALFASAEGMFHVNV----------------PSGEVRNSVGAGDSVVAGFLAALQEGK 263
Query: 311 PVEDCVRTGCYAANVVIQRSG 331
+ED V A + G
Sbjct: 264 SLEDAVPFAVAAGSATAFSDG 284
|
| >d2fv7a1 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.3 bits (178), Expect = 3e-15
Identities = 55/301 (18%), Positives = 96/301 (31%), Gaps = 22/301 (7%)
Query: 43 HLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTA 102
LP E GG N ++ TS + +GKD FG + +N
Sbjct: 20 RLPKTGETIHGHKFFIGFGGKGAN---QCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQ 76
Query: 103 AGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYY 162
++ ++ A +V E N+ + L ++ +
Sbjct: 77 NDISTEFTYQTKDAATGTASIIVNNEGQ---NIIVIVAGANLLLNTEDLRAAANVISRAK 133
Query: 163 IAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETE 222
+ L ++P + A + + + D NE+E
Sbjct: 134 VMVCQLEITPATSLEALTMARRSGVKTLF-----NPAPAIADLDPQFYTLSDVFCCNESE 188
Query: 223 ARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVIL 282
A + + ++ +IT GA+ VV + + +
Sbjct: 189 AEILTGLTVGSAAD------AGEAALVLLKRGCQVVIITLGAEGCVVLSQTEPEPKHIPT 242
Query: 283 LPKEKLVDTNGAGDAFVGGFLSQL--VQEKPVEDCVRTGCYAANVVIQRSGC--TYPPKP 338
K K VDT GAGD+FVG L +ED + + A V +Q +G +YP K
Sbjct: 243 -EKVKAVDTTGAGDSFVGALAFYLAYYPNLSLEDMLNRSNFIAAVSVQAAGTQSSYPYKK 301
Query: 339 E 339
+
Sbjct: 302 D 302
|
| >d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: 2-keto-3-deoxygluconate kinase species: Thermus thermophilus [TaxId: 274]
Score = 72.5 bits (176), Expect = 4e-15
Identities = 53/294 (18%), Positives = 92/294 (31%), Gaps = 19/294 (6%)
Query: 48 DELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNV 107
L K +E GGA N VA + ++ ++G +G+D+ G +++ A GV++
Sbjct: 20 GHLRGKRLLEVYVGGAEVN---VAVALARLGVKVGFVGRVGEDELGAMVEERLRAEGVDL 76
Query: 108 KYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFF 167
++ TG + S +E ++ +++G
Sbjct: 77 THFRRAPGFTGLY-LREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRFLHLSGIT 135
Query: 168 LTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFA 227
+SPE+ + + + P+E R
Sbjct: 136 PALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSPEEA----------RGFLERALP 185
Query: 228 KVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEK 287
V E L V+ +GA DG+ +
Sbjct: 186 GVDLLFLSEEEAELLFGRVEEALRALSAPEVVLKRGAKGAWAFVDGRRVEGSA---FAVE 242
Query: 288 LVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCT--YPPKPE 339
VD GAGDAF G+L+ V PVE+ +R V G P + +
Sbjct: 243 AVDPVGAGDAFAAGYLAGAVWGLPVEERLRLANLLGASVAASRGDHEGAPYRED 296
|
| >d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Hypothetical fructokinase ST2478 species: Sulfolobus tokodaii [TaxId: 111955]
Score = 71.4 bits (173), Expect = 1e-14
Identities = 40/295 (13%), Positives = 78/295 (26%), Gaps = 14/295 (4%)
Query: 49 ELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVK 108
L E G+ N ++ I +G D+FG + GV+V
Sbjct: 20 PLRHVSYFEKHVAGSEAN---YCVAFIKQGNECGIIAKVGDDEFGYNAIEWLRGQGVDVS 76
Query: 109 YYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIAGFFL 168
+ + + + L + + PE + +
Sbjct: 77 HMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDEEYVKSADLVHSSGI 136
Query: 169 TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAK 228
T++ S A + A + E+A + +
Sbjct: 137 TLAISSTAKEAVYKAFEIASNRSF---DTNIRLKLWSAEEAKREILKLLSKFHLKFLITD 193
Query: 229 VHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKL 288
+ E K ++ + + +GA + + V +
Sbjct: 194 TDDSKIILGESDPDKAAKAFSDYAEIIVMKLGPKGAIVYYDGKKYYSSGYQVPV------ 247
Query: 289 VDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGCT--YPPKPEFN 341
D GAGDA G FLS + +E + A+ + + G P +
Sbjct: 248 EDVTGAGDALGGTFLSLYYKGFEMEKALDYAIVASTLNVMIRGDQENLPTTKDIE 302
|
| >d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Thermotoga maritima [TaxId: 2336]
Score = 70.1 bits (170), Expect = 3e-14
Identities = 50/290 (17%), Positives = 85/290 (29%), Gaps = 28/290 (9%)
Query: 43 HLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTA 102
H E + GG N A + +I + ++ +
Sbjct: 21 HFTKPGETQKAIEMNVFPGGKGAN---QAVTVAKIGEKGCRFVTCIGNDDYSDLLIENYE 77
Query: 103 AGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYY 162
Y G+ ++ A K E + W+ + ++
Sbjct: 78 KLGITGYIRVSLPTGRAFIEVDKTGQNRIIIFPGANAELKKELID----WNTLSESDILL 133
Query: 163 IAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETE 222
+ + + ++ E+ Y+DY+ NE E
Sbjct: 134 LQNEIPFETTLECAKRFNGIVIFDPAPAQGIN------------EEIFQYLDYLTPNEKE 181
Query: 223 ARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVIL 282
+K E VE+ K + ++ G V++ + K FP
Sbjct: 182 IEALSKDFFGEFLTVEK------AAEKFLELGVKNVIVKLGDKGVLLVNKNEKKHFPT-- 233
Query: 283 LPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRSGC 332
K K VDT AGD F G F L + K E+ V G AA + + R G
Sbjct: 234 -FKVKAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFGTAAAAISVTRLGA 282
|
| >d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} Length = 304 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Aminoimidazole riboside kinase species: Salmonella typhimurium [TaxId: 90371]
Score = 63.7 bits (153), Expect = 4e-12
Identities = 49/293 (16%), Positives = 95/293 (32%), Gaps = 19/293 (6%)
Query: 46 MYDELASKEN-VEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAG 104
D + K+N GGA+ N V + ++ G +IGC+G D G +++ G
Sbjct: 10 SVDLVPEKQNSYLKCPGGASAN---VGVCVARLGGECGFIGCLGDDDAGRFLRQVFQDNG 66
Query: 105 VNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIA 164
V+V + ++ T + + + + + + Y+
Sbjct: 67 VDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQDLPPFRQYEWFYFSSI 126
Query: 165 GFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEAR 224
G + E+ A + +++ + + +
Sbjct: 127 GLTDRPAREACLEGARRMREAGGYVLFDVNLRSKMWGNTD-------EIPELIARSAALA 179
Query: 225 TFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLP 284
+ KV E + + T+I+ GAD ++ FP P
Sbjct: 180 SICKVSADELCQLSGASHWQDARYYLRDLGCDTTIISLGADGALLITAEGEFHFPA---P 236
Query: 285 KEKLVDTNGAGDAFVGGFLSQLVQ-----EKPVEDCVRTGCYAANVVIQRSGC 332
+ +VDT GAGDAFVGG L L + + + + + + G
Sbjct: 237 RVDVVDTTGAGDAFVGGLLFTLSRANCWDHALLAEAISNANACGAMAVTAKGA 289
|
| >d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: PfkB-like kinase domain: Pyridoxamine kinase species: Escherichia coli [TaxId: 562]
Score = 50.2 bits (119), Expect = 1e-07
Identities = 25/179 (13%), Positives = 53/179 (29%), Gaps = 25/179 (13%)
Query: 171 SPESIQMVAEHAAAKNKVFMMNLSAPFIC---------------EFFREPQEKALPYMDY 215
S E + + +V N A + C LP D
Sbjct: 86 SAEQGEHILGIVR---QVKAANPQAKYFCDPVMGHPEKGCIVAPGVAEFHVRHGLPASDI 142
Query: 216 VFGNETEARTFAKVHGWETDNVEEIALKI-SQWPKA---SGTHKRITVITQGADPVVVAE 271
+ N E + + A ++ +Q P+ + + +V A+
Sbjct: 143 IAPNLVELEILCEHAVNNVEEAVLAARELIAQGPQIVLVKHLARAGYSRDRFEMLLVTAD 202
Query: 272 DGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAANVVIQRS 330
+ P++ + G GD G L +L+Q +++ + A ++ +
Sbjct: 203 EAWHISRPLV---DFGMRQPVGVGDVTSGLLLVKLLQGATLQEALEHVTAAVYEIMVTT 258
|
| >d1lhpa_ c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: PfkB-like kinase domain: Pyridoxal kinase species: Sheep (Ovis aries) [TaxId: 9940]
Score = 36.7 bits (84), Expect = 0.003
Identities = 21/134 (15%), Positives = 43/134 (32%), Gaps = 9/134 (6%)
Query: 206 QEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGAD 265
+EK +P D + N+ EA + E+ + + +++
Sbjct: 134 REKVVPVADIITPNQFEAELLTGRKIHSQEEALEVMDMLHSMGPDTVVITSSNLLSPRGS 193
Query: 266 PVVVAEDGKVKLFP-------VILLPKEKL-VDTNGAGDAFVGGFLSQLV-QEKPVEDCV 316
++A + P I + K+ G GD F L+ ++
Sbjct: 194 DYLMALGSQRTRAPDGSVVTQRIRMEMHKVDAVFVGTGDLFAAMLLAWTHKHPNNLKVAC 253
Query: 317 RTGCYAANVVIQRS 330
A + V+QR+
Sbjct: 254 EKTVSAMHHVLQRT 267
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 341 | |||
| d1bx4a_ | 342 | Adenosine kinase {Human (Homo sapiens) [TaxId: 960 | 100.0 | |
| d2absa1 | 350 | Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} | 100.0 | |
| d1vm7a_ | 299 | Ribokinase {Thermotoga maritima [TaxId: 2336]} | 100.0 | |
| d1v19a_ | 302 | 2-keto-3-deoxygluconate kinase {Thermus thermophil | 100.0 | |
| d2f02a1 | 313 | Tagatose-6-phosphate kinase LacC {Enterococcus fae | 100.0 | |
| d1rkda_ | 306 | Ribokinase {Escherichia coli [TaxId: 562]} | 100.0 | |
| d2afba1 | 333 | 2-keto-3-deoxygluconate kinase {Thermotoga maritim | 100.0 | |
| d2abqa1 | 306 | Fructose 1-phosphate kinase FruB {Bacillus halodur | 100.0 | |
| d2fv7a1 | 308 | Ribokinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2ajra1 | 319 | Putative sugar kinase TM0828 {Thermotoga maritima | 100.0 | |
| d2dcna1 | 308 | Hypothetical fructokinase ST2478 {Sulfolobus tokod | 100.0 | |
| d1tyya_ | 304 | Aminoimidazole riboside kinase {Salmonella typhimu | 100.0 | |
| d1vk4a_ | 288 | Hypothetical protein TM0415 {Thermotoga maritima [ | 100.0 | |
| d1vi9a_ | 288 | Pyridoxamine kinase {Escherichia coli [TaxId: 562] | 99.67 | |
| d1ub0a_ | 258 | 4-amino-5-hydroxymethyl-2-methylpyrimidine phospha | 99.47 | |
| d1lhpa_ | 309 | Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940] | 99.36 | |
| d1jxha_ | 266 | 4-amino-5-hydroxymethyl-2-methylpyrimidine phospha | 99.31 | |
| d1ekqa_ | 269 | Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ba | 98.82 | |
| d1v8aa_ | 264 | Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ar | 98.5 | |
| d1u2xa_ | 450 | ADP-specific phosphofructokinase {Pyrococcus horik | 98.3 | |
| d1kyha_ | 275 | Hypothetical protein YxkO {Bacillus subtilis [TaxI | 98.11 | |
| d1gc5a_ | 467 | ADP-dependent glucokinase {Archaeon Thermococcus l | 98.06 | |
| d1ua4a_ | 454 | ADP-dependent glucokinase {Archaeon Pyrococcus fur | 98.04 | |
| d2ax3a1 | 278 | Hypothetical protein TM0922, C-terminal domain {Th | 97.98 | |
| d1l2la_ | 451 | ADP-dependent glucokinase {Archaeon Thermococcus l | 97.77 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 83.09 |
| >d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Adenosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.3e-51 Score=369.75 Aligned_cols=339 Identities=53% Similarity=0.930 Sum_probs=293.3
Q ss_pred CcceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHH-hCCCCce
Q 019402 3 YEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWM-LQIPGAT 81 (341)
Q Consensus 3 ~~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l-~~lg~~v 81 (341)
++..|++||++++|++.++|+.||+++++++|++.+.+..+.|...+..........+||++.|+|.+++.+ ..+|.++
T Consensus 2 ~~~~il~iG~~~vD~~~~vd~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~GG~~~N~a~~~a~~l~~lG~~~ 81 (342)
T d1bx4a_ 2 RENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAA 81 (342)
T ss_dssp CTTCEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHHHHSCCEEEEECHHHHHHHHHHHHHCSSTTCE
T ss_pred CCCEEEEECcceEEEEEEeCHHHHHHcCCCCCceeechhhHHHHHHHhhcccceEEeCCcHHHHHHHHHHHhccccCceE
Confidence 456799999999999999999999999999999999999999999999999999999999999999887653 3368999
Q ss_pred EEEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeC-CeeceeecccccccCCcccCCCchhHhhhhcceE
Q 019402 82 SYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVG-GERSLVANLSAANCYKSEHLKRPEIWSIVEKAKY 160 (341)
Q Consensus 82 ~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (341)
.++|.+|+|.+|+++++.|+++||+++++...+.+|+.+++.+.+ +++.+....+.+.....+..........+..+++
T Consensus 82 ~~ig~vG~D~~G~~i~~~l~~~GVd~~~i~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (342)
T d1bx4a_ 82 TFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARV 161 (342)
T ss_dssp EEEEEEESSHHHHHHHHHHHHTTCEEEEEEESSSCCCEEEEEEETTEEEEEEECGGGGGCCGGGTTTSHHHHHHHHHCSE
T ss_pred EEEeecCCChhhhhhhhhhhhhcccceeeeeecccceEEEEEecCCccceeeeccccccccchhhhhhhhhHHHHhhccc
Confidence 999999999999999999999999999997777788888887775 4454444445444444444443344567889999
Q ss_pred EEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHH
Q 019402 161 YYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEI 240 (341)
Q Consensus 161 v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~ 240 (341)
+++.++......+....+++.+++.+..+.+++..+.+....+..+.++++++|++++|++|++.+++.......+.+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ne~Ea~~l~~~~~~~~~~~~~~ 241 (342)
T d1bx4a_ 162 CYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEI 241 (342)
T ss_dssp EEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCSHHHHHHTHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCCCHHHH
T ss_pred ceecccccchhHHHHHHHHHHhhhccceeecccccccchhccccchhhhhccccEEeecHHHHHHhhCcCCcccchhhhh
Confidence 99999887778888899999999999999999988887777777788999999999999999999999877667788887
Q ss_pred HHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHH
Q 019402 241 ALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGC 320 (341)
Q Consensus 241 ~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~ 320 (341)
.+.+..+......+.+.+|+|+|++|++++.+++..+++.++.++++++|||||||+|+|||+++|++|+++++|+++|+
T Consensus 242 ~~~~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~agfl~~l~~g~~~~~a~~~a~ 321 (342)
T d1bx4a_ 242 AKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGH 321 (342)
T ss_dssp HHHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHHHHhhcccCceEEEEEcccceEEEEeCCceEEEecCCCCCCCccCCCcHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 77776554435667888999999999999988888777777777779999999999999999999999999999999999
Q ss_pred HHHhhhhhhccccCCCCCCCC
Q 019402 321 YAANVVIQRSGCTYPPKPEFN 341 (341)
Q Consensus 321 ~~aa~~v~~~g~~~p~~~e~~ 341 (341)
++|+++|++.|+++|++|+|.
T Consensus 322 ~~Aa~~v~~~Ga~~p~~~d~~ 342 (342)
T d1bx4a_ 322 YAASIIIRRTGCTFPEKPDFH 342 (342)
T ss_dssp HHHHHHTTSSSSCCCSSCCCC
T ss_pred HHHHHHHcCcCCCCCCCCCCC
Confidence 999999999999999999884
|
| >d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Adenosine kinase species: Toxoplasma gondii [TaxId: 5811]
Probab=100.00 E-value=3.4e-46 Score=339.40 Aligned_cols=327 Identities=33% Similarity=0.551 Sum_probs=260.1
Q ss_pred cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEE
Q 019402 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~l 83 (341)
+++|+|||++++|++..++++|++++++.+|++.+..+++.+.. ......+.+..+||+++|+|+++++|...|..+.|
T Consensus 3 p~kil~iG~~~vD~~~~v~~~~l~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~GG~~~N~a~~la~L~~~g~~~~~ 81 (350)
T d2absa1 3 PMRVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIY-STLDQFNPTSLPGGSALNSVRVVQKLLRKPGSAGY 81 (350)
T ss_dssp CCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGG-GTGGGGCCEEEEESHHHHHHHHHHHHHCSTTSEEE
T ss_pred CcEEEEECCceEEEEEEeCHHHHHHcCCCCCcceecCHHHHHHH-HhhhccCceEecCcHHHHHHHHHHHhccCCccEEE
Confidence 56999999999999999999999999999999998887766643 33344567788999999999999996555789999
Q ss_pred EEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCCchhHhhhhcceEEEE
Q 019402 84 IGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYI 163 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i 163 (341)
+|.+|+|.+|+.+++.|+++||++.++..++.+|+.+++.+++++++++.+.++...+...+.. ...+...+++++
T Consensus 82 ig~vG~D~~G~~i~~~l~~~gv~~~~~~~~~~~t~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 157 (350)
T d2absa1 82 MGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINEKERTLCTHLGACGSFRLPEDW----TTFASGALIFYA 157 (350)
T ss_dssp EEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCCEEEEEEEETTEEEEEEECGGGGGCCCCTTH----HHHTTTCCEEEE
T ss_pred EecCCCChhhHhHHHHHHhcCCcccccccccccceEEEEEeeccCcceEeeecccccccccccc----cccccccccccc
Confidence 9999999999999999999999999988788889999999998888887776666666554443 356788999999
Q ss_pred eccccccCHH-HHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCC-------
Q 019402 164 AGFFLTVSPE-SIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETD------- 235 (341)
Q Consensus 164 ~~~~~~~~~~-~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~------- 235 (341)
.+..+..... ....+....+..+..+.+++..+.+...+.+.....++++|++++|++|++.+++.......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~N~~E~~~l~~~~~~~~~~~~~~~~ 237 (350)
T d2absa1 158 TAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKTALST 237 (350)
T ss_dssp EGGGGTTCHHHHHHHHHHHHTSTTCEEEEECCCHHHHHHCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCC---------
T ss_pred eeeeeccccchhHHHHHHhhhhccceEEEecchhhhhhhhhcchhhhcccCCEEEecHHHHHHHhCCCCchhhHHHHhhh
Confidence 8876655544 44445556666778899999888877777777888999999999999999999875432111
Q ss_pred -CHHH---H---HHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCe-----EEEEecccCCCCcccCCCCcchhhHHHHH
Q 019402 236 -NVEE---I---ALKISQWPKASGTHKRITVITQGADPVVVAEDGK-----VKLFPVILLPKEKLVDTNGAGDAFVGGFL 303 (341)
Q Consensus 236 -~~~~---~---~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~-----~~~v~~~~~~~~~vvdttGAGDaf~a~~~ 303 (341)
..++ . +.++..... ...+++.+|+|+|++|++++.++. .++++.++.+..++||||||||+|+|||+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~vvit~G~~G~~~~~~~~~g~~~~~~~~~p~~~~~~VVDttGAGDaF~ag~l 316 (350)
T d2absa1 238 ANKEHAVEVCTGALRLLTAGQ-NTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFVGGFL 316 (350)
T ss_dssp -CHHHHHHHHHHHHHHHHTTC-CCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCGGGCCCCTTHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHhhh-hccCccEEEEECCCCCceeecCCCCcceeeeecccccCCCCCccCCCcHHHHHHHHHH
Confidence 1111 1 111111111 345678899999999999986542 34455444445578999999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHhhhhhhccccCCC
Q 019402 304 SQLVQEKPVEDCVRTGCYAANVVIQRSGCTYPP 336 (341)
Q Consensus 304 ~~l~~g~~~~~a~~~A~~~aa~~v~~~g~~~p~ 336 (341)
|+|++|+++++|+++|+++|+.+|++.|+++|-
T Consensus 317 ~~ll~g~~~~~al~~a~~~Aa~~v~~~Ga~l~~ 349 (350)
T d2absa1 317 YALSQGKTVKQCIMCGNACAQDVIQHVGFSLSF 349 (350)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHTSSSCCCCC
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHhcccCCCCCC
Confidence 999999999999999999999999999999874
|
| >d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=9.4e-43 Score=309.85 Aligned_cols=287 Identities=23% Similarity=0.307 Sum_probs=242.5
Q ss_pred cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCc-eE
Q 019402 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGA-TS 82 (341)
Q Consensus 4 ~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~-v~ 82 (341)
.++|+|+|++++|++..++ ++|.+++..+..+...++||+++|+|.+|++ +| .+ |.
T Consensus 2 ~m~I~ViG~~~~D~~~~v~--------------------~~p~~g~~~~~~~~~~~~GG~~~Nva~~l~~-lG--~~~~~ 58 (299)
T d1vm7a_ 2 FLVISVVGSSNIDIVLKVD--------------------HFTKPGETQKAIEMNVFPGGKGANQAVTVAK-IG--EKGCR 58 (299)
T ss_dssp CCCEEEECCCEEEEEEECS--------------------SCCCTTCEEECSEEEEEEECHHHHHHHHHHH-HH--SSCEE
T ss_pred eeEEEEeCeeeEEEEEEeC--------------------CCCCCCcEEeeeeEEEecCCHHHHHHHHHHH-cC--CCceE
Confidence 3499999999999999998 6899999989899999999999999999998 44 65 89
Q ss_pred EEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcceEE
Q 019402 83 YIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYY 161 (341)
Q Consensus 83 li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 161 (341)
++|.+|+|++|+.+++.|++.||++..+. +.+|+.+.+.++ +|+|+++...+....++++.++. ..+...+++
T Consensus 59 ~i~~vG~D~~g~~~~~~l~~~gv~~~~~~--~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~----~~~~~~~~~ 132 (299)
T d1vm7a_ 59 FVTCIGNDDYSDLLIENYEKLGITGYIRV--SLPTGRAFIEVDKTGQNRIIIFPGANAELKKELIDW----NTLSESDIL 132 (299)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTEEEEEEC--SSCCCEEEEEECTTSCEEEEEECGGGGGCCGGGCCH----HHHTTCSEE
T ss_pred EEEeeeccchhHHHHHHHhhhcccccccc--ccccceeEEEecCCCCeeEeccCCcchhCCHhHhCh----hhcccccce
Confidence 99999999999999999999999987664 456888888887 68888887778777888887764 677889999
Q ss_pred EEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHH
Q 019402 162 YIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIA 241 (341)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~ 241 (341)
++++... . ....+...+.+..+.+++..... .....++.+|++++|.+|+............+.+.+.
T Consensus 133 ~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 200 (299)
T d1vm7a_ 133 LLQNEIP---F---ETTLECAKRFNGIVIFDPAPAQG------INEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEKAA 200 (299)
T ss_dssp EECSSSC---H---HHHHHHHHHCCSEEEECCCSCTT------CCGGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHHHH
T ss_pred eeccccc---c---hhhhHhhhhcCceEEEecCcchh------hhHHHHhhcccccccHHHHHhhhccccccchhhhhhh
Confidence 9987432 2 22345566778888888764331 1234677899999999999988876665667788888
Q ss_pred HHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHH
Q 019402 242 LKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCY 321 (341)
Q Consensus 242 ~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~ 321 (341)
+.+ ...+.+.+++|+|++|++++.+++.++++++++ +++|||||||+|.|||+++|++|+++++|+++|++
T Consensus 201 ~~l------~~~~~~~vvvt~G~~g~~~~~~~~~~~~~~~~~---~vvDttGAGDaf~Ag~i~~l~~g~~~~~al~~a~~ 271 (299)
T d1vm7a_ 201 EKF------LELGVKNVIVKLGDKGVLLVNKNEKKHFPTFKV---KAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFGTA 271 (299)
T ss_dssp HHH------HHTTCSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred hhh------hcCCCcEEEEeCCCCceEEEeccceEEEeeeee---eeECCCCccHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 888 556789999999999999999999999888765 89999999999999999999999999999999999
Q ss_pred HHhhhhhhcccc--CCCCCCC
Q 019402 322 AANVVIQRSGCT--YPPKPEF 340 (341)
Q Consensus 322 ~aa~~v~~~g~~--~p~~~e~ 340 (341)
+|+++|++.|+. +|+++|+
T Consensus 272 ~aa~~~~~~G~~~~~p~~~ei 292 (299)
T d1vm7a_ 272 AAAISVTRLGAQSSIPAREEV 292 (299)
T ss_dssp HHHHHTTSSSSGGGCCCHHHH
T ss_pred HHHHHhCcCCCCCCCCCHHHH
Confidence 999999999984 6887764
|
| >d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: 2-keto-3-deoxygluconate kinase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=3.9e-41 Score=299.56 Aligned_cols=286 Identities=23% Similarity=0.267 Sum_probs=225.9
Q ss_pred cceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEE
Q 019402 4 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~l 83 (341)
|.+|+|||++++|++...+ +..........++||.|+|+|.++++ + |.+|.+
T Consensus 1 ~~~i~viG~~~vD~~~~~~-------------------------~~~~~~~~~~~~~GG~~~Nva~~l~~-l--g~~v~~ 52 (302)
T d1v19a_ 1 MLEVVTAGEPLVALVPQEP-------------------------GHLRGKRLLEVYVGGAEVNVAVALAR-L--GVKVGF 52 (302)
T ss_dssp CCSEEEESCCEEEEEESSS-------------------------SCGGGCSEEEEEEECHHHHHHHHHHH-T--TCCEEE
T ss_pred CCeEEEECcceEEEecCCC-------------------------CceeecceEEEecCcHHHHHHHHHHH-c--CCCEEE
Confidence 3589999999999886443 33455667888999999999999998 4 599999
Q ss_pred EEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEe-CCeeceeecc--cccccCCcccCCCchhHhhhhcceE
Q 019402 84 IGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKRPEIWSIVEKAKY 160 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (341)
+|.+|+|.+|+.+++.|+++|+++.++...+..++.+.+.+. +|++++.... .....++.+.... ..++++++
T Consensus 53 ~~~iG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~ 128 (302)
T d1v19a_ 53 VGRVGEDELGAMVEERLRAEGVDLTHFRRAPGFTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDP----DYLEGVRF 128 (302)
T ss_dssp EEEEESSHHHHHHHHHHHHHTCBCTTEEEESSCCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCG----GGGTTCSE
T ss_pred EEEEcCCcccccchhhhhhcccccchhccccccccccchhhccccccccccccccccchhhccccccH----HHHhcccE
Confidence 999999999999999999999999988655556666666665 5777654332 2333444444432 56889999
Q ss_pred EEEeccccccC---HHHHHHHHHHHHhcCCeEEEeCCcHH---HHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCC
Q 019402 161 YYIAGFFLTVS---PESIQMVAEHAAAKNKVFMMNLSAPF---ICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWET 234 (341)
Q Consensus 161 v~i~~~~~~~~---~~~~~~~~~~~~~~~~~v~~d~~~~~---~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~ 234 (341)
+++..+..... .+....+++..++.+..+.+|+.... ......+.+...++++|++++|++|++...+.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~e~~~~~~~----- 203 (302)
T d1v19a_ 129 LHLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSPEEARGFLERALPGVDLLFLSEEEAELLFGR----- 203 (302)
T ss_dssp EEEETHHHHHCHHHHHHHHHHHHHHHTTTCEEEEECCCCTTTCCHHHHHHHHHHHGGGCSEEEEEHHHHHHHHSS-----
T ss_pred EeeeccccccchhHHHHHHHHHHHHHhcCCccccccchhhhccchhhhHHHHHhhhhhccchhhhhhhhhhhhhh-----
Confidence 99987764333 36788899999999999999885321 11223445777899999999999999877642
Q ss_pred CCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHH
Q 019402 235 DNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVED 314 (341)
Q Consensus 235 ~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~ 314 (341)
..+..+. .+.+.+|||+|++|++++++++.+++|++++ +++|||||||+|+|||+|++++|+++++
T Consensus 204 --~~~~~~~---------~~~~~viit~G~~G~~~~~~~~~~~~p~~~v---~vvDttGAGDaf~a~~~~~~~~g~~~~~ 269 (302)
T d1v19a_ 204 --VEEALRA---------LSAPEVVLKRGAKGAWAFVDGRRVEGSAFAV---EAVDPVGAGDAFAAGYLAGAVWGLPVEE 269 (302)
T ss_dssp --TTHHHHH---------TCCSEEEEECTTSCEEEEETTEEEECCCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHH
T ss_pred --hhhhhhh---------ccceEEEEecCCCCCcccccccccccccccc---ccCCCCChhHHHHHHHHHHHHcCCCHHH
Confidence 1222222 3568899999999999999999999998765 7899999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhccc--cCCCCCCC
Q 019402 315 CVRTGCYAANVVIQRSGC--TYPPKPEF 340 (341)
Q Consensus 315 a~~~A~~~aa~~v~~~g~--~~p~~~e~ 340 (341)
|+++|+++|++++++.|+ .+|+.+|+
T Consensus 270 a~~~a~~~Aa~~v~~~G~~~~~p~~~~i 297 (302)
T d1v19a_ 270 RLRLANLLGASVAASRGDHEGAPYREDL 297 (302)
T ss_dssp HHHHHHHHHHHHHTSSSSSTTCCCHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 999999999999999998 47776553
|
| >d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Tagatose-6-phosphate kinase LacC species: Enterococcus faecalis [TaxId: 1351]
Probab=100.00 E-value=2.3e-40 Score=296.40 Aligned_cols=293 Identities=16% Similarity=0.166 Sum_probs=231.4
Q ss_pred EEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEEe
Q 019402 7 LLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIGC 86 (341)
Q Consensus 7 i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~~ 86 (341)
+++.=++++|+++.+| ++ .+++..++.+...++||++.|+|.++++ +| .++.++|.
T Consensus 3 ~~~~~np~vD~~~~vd--------------------~~-~~g~~~~~~~~~~~~GG~~~NvA~~l~~-lG--~~~~~~~~ 58 (313)
T d2f02a1 3 VTVTMNPSIDISYLLD--------------------HL-KLDTVNRTSQVTKTPGGKGLNVTRVIHD-LG--GDVIATGV 58 (313)
T ss_dssp EEEESSCEEEEEEECS--------------------CC-CTTSEEEESCEEEEEESHHHHHHHHHHH-HT--CCEEEEEE
T ss_pred EEEeCChHHcEEEEeC--------------------Cc-cCCCEEEeCeeeecCCCHHHHHHHHHHH-CC--CCEEEEEE
Confidence 4444577899999998 45 4566667788999999999999999998 55 99999999
Q ss_pred ecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCC--chhHhhhhcceEEEEe
Q 019402 87 IGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKR--PEIWSIVEKAKYYYIA 164 (341)
Q Consensus 87 vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~i~ 164 (341)
+|+| +|+.+.+.|++.||++.++...+ +|+.++..+++++++.+...+ ..++++++.. ....+.+.++|+++++
T Consensus 59 vGdd-~~~~i~~~l~~~gi~~~~i~~~~-~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~v~~~ 134 (313)
T d2f02a1 59 LGGF-HGAFIANELKKANIPQAFTSIKE-ETRDSIAILHEGNQTEILEAG--PTVSPEEISNFLENFDQLIKQAEIVTIS 134 (313)
T ss_dssp EEHH-HHHHHHHHHHHTTCCBCCEEESS-CCEEEEEEEETTEEEEEEECC--CBCCHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred ecCc-cHHHHHHHHHhhccCceEEEeec-CCceEEEEEeCCCceEEeecc--ccCCHHHHHHHHHHhhhhhcccceEEEe
Confidence 9976 78899999999999999986544 577777777776665544322 3455544432 1234578999999999
Q ss_pred cccc-ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHHH
Q 019402 165 GFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALK 243 (341)
Q Consensus 165 ~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~ 243 (341)
+... ....+.+.++++.+++.+.++++|++.... ....+.+.+.|++++|++|+..+++.... .++.......
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~n~~E~~~l~g~~~~-~~~~~~~~~~ 208 (313)
T d2f02a1 135 GSLAKGLPSDFYQELVQKAHAQEVKVLLDTSGDSL-----RQVLQGPWKPYLIKPNLEELEGLLGQDFS-ENPLAAVQTA 208 (313)
T ss_dssp SCCCBTSCTTHHHHHHHHHHHTTCEEEEECCTHHH-----HHHHHSSCCCSEECCBHHHHHHHHTCCCC-SSCHHHHHHH
T ss_pred cccccccCHHHHHHHHHHHHhcCCceeecchHHHH-----HHHhhhcccceEEEehhhhHHHhhccccc-cchhhHHHHH
Confidence 8653 345688999999999999999999976542 12334577899999999999999875332 2333333333
Q ss_pred HhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHHHH
Q 019402 244 ISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAA 323 (341)
Q Consensus 244 l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~a 323 (341)
+.++ ...+++.++||+|++|++++.++..++++++++ +++|||||||+|+|||+|+|++|+++++|+++|+++|
T Consensus 209 ~~~~---~~~g~~~vivT~G~~Ga~~~~~~~~~~~~~~~v---~vvDttGAGD~f~ag~i~~l~~g~~~~~al~~A~a~a 282 (313)
T d2f02a1 209 LTKP---MFAGIEWIVISLGKDGAIAKHHDQFYRVKIPTI---QAKNPVGSGDATIAGLAYGLAKDAPAAELLKWGMAAG 282 (313)
T ss_dssp HTSG---GGTTCSEEEEECGGGCEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHH---HhcCCceeEEecccceEEEEeCCceEecccccC---CCCCCcCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 3222 456789999999999999999999999987755 8999999999999999999999999999999999999
Q ss_pred hhhhhhccccCCCCCC
Q 019402 324 NVVIQRSGCTYPPKPE 339 (341)
Q Consensus 324 a~~v~~~g~~~p~~~e 339 (341)
++++++.|+..|+.++
T Consensus 283 a~~~~~~g~~~~~~e~ 298 (313)
T d2f02a1 283 MANAQERMTGHVDVEN 298 (313)
T ss_dssp HHHHHSSSSSCCCHHH
T ss_pred HHHhCCCCCCCCCHHH
Confidence 9999999998887654
|
| >d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=5.5e-41 Score=298.17 Aligned_cols=293 Identities=22% Similarity=0.322 Sum_probs=228.5
Q ss_pred ceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEE
Q 019402 5 GILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li 84 (341)
.+|+|+|++++|+++.+| ++|.+++.....+....+||++.|+|.+|++ +| .+|.++
T Consensus 2 ~~IlviG~~~~D~~~~v~--------------------~~p~~g~~~~~~~~~~~~GG~~~NvA~~l~~-lG--~~v~~~ 58 (306)
T d1rkda_ 2 GSLVVLGSINADHILNLQ--------------------SFPTPGETVTGNHYQVAFGGKGANQAVAAGR-SG--ANIAFI 58 (306)
T ss_dssp CEEEEECCCEEEEEEECS--------------------SCCCTTCCCCCCCEEEEEECHHHHHHHHHHH-HT--CEEEEE
T ss_pred CEEEEEceeeEEEEEeeC--------------------CCCCCCceEeeceEEEecCCHHHHHHHHHHH-cC--CCEEEE
Confidence 489999999999999998 7899998888899999999999999999998 45 999999
Q ss_pred EeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcceEEE
Q 019402 85 GCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYY 162 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 162 (341)
|.+|+|.+|+.+++.+++.|+++.++. .....++.+..... ++.+................... ..........+.
T Consensus 59 ~~vG~d~~~~~~~~~l~~~gi~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 136 (306)
T d1rkda_ 59 ACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEA--QRERIANASALL 136 (306)
T ss_dssp EEEESSTTHHHHHHHHHTTTEECTTEEEETTCCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHT--THHHHHHCSEEE
T ss_pred EEECCccccchhhhccccccccccccccccccccccceeeEeecCcceeeeeccchhhhhhhhhhh--hHhhhhhheeee
Confidence 999999999999999999999999884 56666666666665 56666655544433333332222 112233334444
Q ss_pred EeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHH
Q 019402 163 IAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIAL 242 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~ 242 (341)
... ....+............+......+... ++....++++.|++++|.+|+..+++.......+...+.+
T Consensus 137 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~d~~~~n~~E~~~l~~~~~~~~~~~~~~~~ 207 (306)
T d1rkda_ 137 MQL---ESPLESVMAAAKIAHQNKTIVALNPAPA------RELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQ 207 (306)
T ss_dssp ECS---SSCHHHHHHHHHHHHHTTCEEEECCCSC------CCCCHHHHTTCSEECCCHHHHHHHHSCCCSSHHHHHHHHH
T ss_pred ecc---cchhhhhhhHHHHhhhcccccccCchhh------hhhHHHHHhhcccccCCHHHHHHHhCCCcccchhHHHHHH
Confidence 332 3345666677777777777766665432 2335567899999999999999998754332223334444
Q ss_pred HHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHHH
Q 019402 243 KISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYA 322 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~ 322 (341)
.+ ...+...+|+|+|++|++++++++.+++|++++ +++||+||||+|+|||+++|++|+++++|+++|+++
T Consensus 208 ~~------~~~~~~~vivt~G~~g~~~~~~~~~~~~~~~~~---~vvDt~GAGDaf~Ag~l~~l~~g~~~~~a~~~a~~~ 278 (306)
T d1rkda_ 208 VL------HEKGIRTVLITLGSRGVWASVNGEGQRVPGFRV---QAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAA 278 (306)
T ss_dssp HH------HHTTCSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HH------hhcCCcEEEEecCCceEEEeecCceEEeCCccC---ccccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 44 456788999999999999999999999998866 899999999999999999999999999999999999
Q ss_pred Hhhhhhhcccc--CCCCCCC
Q 019402 323 ANVVIQRSGCT--YPPKPEF 340 (341)
Q Consensus 323 aa~~v~~~g~~--~p~~~e~ 340 (341)
|+++|++.|+. +|+.+|+
T Consensus 279 aa~~v~~~G~~~~~p~~~ev 298 (306)
T d1rkda_ 279 AAIAVTRKGAQPSVPWREEI 298 (306)
T ss_dssp HHHHHTSSSSGGGCCCHHHH
T ss_pred HHHHhCCCCCCCCCCCHHHH
Confidence 99999999984 7887764
|
| >d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Fructose 1-phosphate kinase FruB species: Bacillus halodurans [TaxId: 86665]
Probab=100.00 E-value=5.6e-41 Score=299.43 Aligned_cols=282 Identities=18% Similarity=0.195 Sum_probs=223.9
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
-+.+..++++|+++.+| ++| +++..++.+....+||++.|+|.+|++ | |.++.++|
T Consensus 2 ~~~~~~np~iD~~~~v~--------------------~~~-~g~~~~~~~~~~~~GG~~~N~A~~l~~-l--G~~~~~ig 57 (306)
T d2abqa1 2 IYTVTLNPSIDYIVQVE--------------------NFQ-QGVVNRSERDRKQPGGKGINVSRVLKR-L--GHETKALG 57 (306)
T ss_dssp EEEEESSCEEEEEEECT--------------------TCC-SSSEEECSEEEEEEECHHHHHHHHHHH-T--TCCCEEEE
T ss_pred EEEEeCchhHeEEEEeC--------------------CcC-CCCeEEcCeeeecCCCHHHHHHHHHHH-c--CCCEEEEE
Confidence 46777899999999998 455 467777888889999999999999998 4 59999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCC-chhHhhhhcceEEEEe
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKR-PEIWSIVEKAKYYYIA 164 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~i~ 164 (341)
.+|+| .|+.+++.|++.||+++++...+ +|+.++... ++++..+. .......++++.. ......+..+++++++
T Consensus 58 ~vG~D-~g~~i~~~L~~~gi~~~~v~~~~-~t~~~i~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (306)
T d2abqa1 58 FLGGF-TGAYVRNALEKEEIGLSFIEVEG-DTRINVKIK-GKQETELN--GTAPLIKKEHVQALLEQLTELEKGDVLVLA 132 (306)
T ss_dssp EEEHH-HHHHHHHHHHHTTCEECCEEESS-CCEEEEEEE-SSSCEEEB--CCCCCCCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred EecCc-cHHHHHHHHHhcccccccceeee-eeEEEEEEe-cccccccc--cccccCCHHHhhhhhhhHhhhccCCEEEEc
Confidence 99998 69999999999999999987544 455554433 33333222 2223333333322 1233456788999998
Q ss_pred cccc-ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHHH
Q 019402 165 GFFL-TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIALK 243 (341)
Q Consensus 165 ~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~ 243 (341)
++.. ....+.+..+++.+++.+.++++|+.... .....+..+|++++|..|+..+++....+.+...+++++
T Consensus 133 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~d~~~~~-------~~~~~~~~~~~l~~n~~E~~~~~~~~~~~~~~~~~~~~~ 205 (306)
T d2abqa1 133 GSVPQAMPQTIYRSMTQIAKERGAFVAVDTSGEA-------LHEVLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQR 205 (306)
T ss_dssp SCCCTTSCTTHHHHHHHHHHTTTCEEEEECCHHH-------HHHHGGGCCSEECCBHHHHHHHHTSCCCSHHHHHHHHHH
T ss_pred CccccchHHHHHHHHHHHHHHcCCceeccchhhH-------HHHHhhhcceeecccccccccccccccccccchhhcccc
Confidence 8653 34457888899999999999999997543 234566789999999999999987654444455666777
Q ss_pred HhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHHHHHHHHHHH
Q 019402 244 ISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRTGCYAA 323 (341)
Q Consensus 244 l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~a 323 (341)
+ ...+.+.+|||+|++|+++++++..+++|++++ +++|||||||+|+|||+++|++|+++++|+++|+++|
T Consensus 206 ~------~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~---~vvDttGAGDaF~ag~l~~l~~g~~~~~al~~a~a~a 276 (306)
T d2abqa1 206 L------IGEGIESILVSFAGDGALFASAEGMFHVNVPSG---EVRNSVGAGDSVVAGFLAALQEGKSLEDAVPFAVAAG 276 (306)
T ss_dssp H------HHTTCCEEEEECGGGCEEEEETTEEEEECCCCC---CCCCCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred c------ccccccceeeeecccCcccccccccccccccCC---ccCCCCcHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 7 456788999999999999999999999887655 8999999999999999999999999999999999999
Q ss_pred hhhhhhccc
Q 019402 324 NVVIQRSGC 332 (341)
Q Consensus 324 a~~v~~~g~ 332 (341)
++++++.|+
T Consensus 277 a~~~~~~G~ 285 (306)
T d2abqa1 277 SATAFSDGF 285 (306)
T ss_dssp HHHHHSSSC
T ss_pred HHHhcCCCC
Confidence 999999995
|
| >d2fv7a1 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-40 Score=296.69 Aligned_cols=295 Identities=24% Similarity=0.312 Sum_probs=230.4
Q ss_pred ceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEE
Q 019402 5 GILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li 84 (341)
.+|+|+|++++|++..++ ++|.+++.+.+++....+||.+.|+|.+|++ + |.+|.++
T Consensus 2 ~~i~viG~~~iD~~~~~~--------------------~~p~~g~~~~~~~~~~~~GG~~~Nva~~l~~-l--g~~v~~i 58 (308)
T d2fv7a1 2 AAVVVVGSCMTDLVSLTS--------------------RLPKTGETIHGHKFFIGFGGKGANQCVQAAR-L--GAMTSMV 58 (308)
T ss_dssp CSEEEECCCEEEEEEECS--------------------SCCCTTCCCCCSEEEEEEECHHHHHHHHHHH-T--TCCEEEE
T ss_pred CEEEEEChhheEeEeecC--------------------CCCCCCceEeeceEEEecCCHHHHHHHHHHH-C--CCCEEEE
Confidence 379999999999999988 7899999888888999999999999999998 4 5999999
Q ss_pred EeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeecccccccCCcccCCCchhHhhhhcceEEE
Q 019402 85 GCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYY 162 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 162 (341)
|.+|+|.+|+.+.+.|+++||++.++. ....+++.+++..+ ++++++....+....+....+.. .........+..
T Consensus 59 s~vG~D~~g~~i~~~L~~~gi~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 136 (308)
T d2fv7a1 59 CKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRA--AANVISRAKVMV 136 (308)
T ss_dssp EEEESSHHHHHHHHHHHTTTEECTTEEEESSSCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHH--THHHHHHCSEEE
T ss_pred EEeccccccccccchhcccccccccccccccccccceEEEEecCCceEEEeeecchhhhchhhhhh--hhhhcccceEEe
Confidence 999999999999999999999999985 55556666666665 68888766655544554443332 223344444544
Q ss_pred EeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCHHHHHH
Q 019402 163 IAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIAL 242 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~ 242 (341)
+.. ..+++......+.+++.+.++.+|+..... ..........+++..+.+|..........+.........
T Consensus 137 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~ 208 (308)
T d2fv7a1 137 CQL---EITPATSLEALTMARRSGVKTLFNPAPAIA-----DLDPQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAAL 208 (308)
T ss_dssp ECS---SSCHHHHHHHHHHHHHTTCEEEECCCSCCT-----TCCTHHHHTCSEEEEEHHHHHHHHSSCCCSHHHHHHHHH
T ss_pred ecc---ccchHHHHHHHHHhhhcCceEEecccchhh-----hhhhhHHhhhhhhhhhHHHHHHhhhhhccchhhhhhHHH
Confidence 433 567788889999999999999999864321 112223446788888988887665543333333444555
Q ss_pred HHhcCCCCCCCCccEEEEeeCCCCEEEEeCC--eEEEEecccCCCCcccCCCCcchhhHHHHHHHH--hcCCCHHHHHHH
Q 019402 243 KISQWPKASGTHKRITVITQGADPVVVAEDG--KVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQL--VQEKPVEDCVRT 318 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~--~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l--~~g~~~~~a~~~ 318 (341)
.+ ...+++.+++|+|++|++++.++ ..+++|++++ +++|||||||+|+|||++++ .+|+++++|+++
T Consensus 209 ~~------~~~~~~~vivT~G~~G~~~~~~~~~~~~~~p~~~v---~vvDttGAGDaF~ag~~~~l~~~~~~~~~~a~~~ 279 (308)
T d2fv7a1 209 VL------LKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKV---KAVDTTGAGDSFVGALAFYLAYYPNLSLEDMLNR 279 (308)
T ss_dssp HH------HTTTCSEEEEECGGGCEEEEESSCCSCEEECCCCC---CCSCCTTHHHHHHHHHHHHHHHCTTSCHHHHHHH
T ss_pred HH------HhcCCCEEEEEecccceeeecccccceeecccccc---cccCCCChhHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 55 46678999999999999999753 4778887655 78999999999999999977 589999999999
Q ss_pred HHHHHhhhhhhcccc--CCCCCCCC
Q 019402 319 GCYAANVVIQRSGCT--YPPKPEFN 341 (341)
Q Consensus 319 A~~~aa~~v~~~g~~--~p~~~e~~ 341 (341)
|+++|+++|++.|+. +|+++|+.
T Consensus 280 a~~~aa~~v~~~G~~~~~p~~~ei~ 304 (308)
T d2fv7a1 280 SNFIAAVSVQAAGTQSSYPYKKDLP 304 (308)
T ss_dssp HHHHHHHHHTSSSGGGGCCCGGGSC
T ss_pred HHHHHHHHhCCCCCCCCCCCHHHHH
Confidence 999999999999994 69998863
|
| >d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Putative sugar kinase TM0828 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=3.3e-40 Score=295.82 Aligned_cols=297 Identities=14% Similarity=0.123 Sum_probs=219.1
Q ss_pred EEEec-CceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 7 LLGMG-NPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 7 i~~iG-~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
|+.+| ++++|+++.++. + ..+..++.....+....+||++.|+|.++++ | |.++.+++
T Consensus 2 i~t~~lnp~iD~~~~v~~-------l-----------~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~-L--G~~~~~~~ 60 (319)
T d2ajra1 2 VLTVTLNPALDREIFIED-------F-----------QVNRLYRINDLSKTQMSPGGKGINVSIALSK-L--GVPSVATG 60 (319)
T ss_dssp EEEEESSCEEEEEEECTT-------C-----------CSSCEEECCSGGGEEEEEESHHHHHHHHHHH-T--TCCEEEEE
T ss_pred EEEEeCChHHcEEEEECC-------c-----------cCCCceeeeecceeeECCCCHHHHHHHHHHH-C--CCCEEEEE
Confidence 44555 789999999973 0 1123333445567788999999999999998 4 59999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEe-ecCCCCcceEEEEEeC-CeeceeecccccccCCcccCCC--chhHhhhhcceEE
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYY-EDESAPTGTCAVCVVG-GERSLVANLSAANCYKSEHLKR--PEIWSIVEKAKYY 161 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~-~~~~~~t~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v 161 (341)
.+|+| +|+.+.+.|++.|+++... ...+.+|+.++.++++ +++.... ..+...++...... ......+.+++++
T Consensus 61 ~vG~d-~g~~~~~~L~~~~~~i~~~~i~~~~~T~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 138 (319)
T d2ajra1 61 FVGGY-MGKILVEELRKISKLITTNFVYVEGETRENIEIIDEKNKTITAI-NFPGPDVTDMDVNHFLRRYKMTLSKVDCV 138 (319)
T ss_dssp EEEHH-HHHHHHHHHHHHCTTEEEEEEEESSCCEEEEEEEETTTTEEEEE-ECCCCCCCHHHHHHHHHHHHHHHTTCSEE
T ss_pred EecCc-cHHHHHHHHHHhCCCCCceeEecCCCCceEEEEEECCCCeEEEE-ecCCCcCCHHHHHHHHHHHHhhcccccEE
Confidence 99965 8999999999987665543 2234568888877774 4443322 22223444443332 1234568899999
Q ss_pred EEeccc-cccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCH-HHHHHHHhhcCCCCCCHHH
Q 019402 162 YIAGFF-LTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNE-TEARTFAKVHGWETDNVEE 239 (341)
Q Consensus 162 ~i~~~~-~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~-~E~~~l~~~~~~~~~~~~~ 239 (341)
+++|.. ...+.+.+.++++.++++++++++|++++.+ +.+.+.....|++++|. +|++.+++....+.++..+
T Consensus 139 ~~sGs~~~~~~~~~~~~l~~~a~~~~~~v~~D~s~~~~-----~~~~~~~~~~~~ikpn~~~e~~~l~g~~~~~~~d~~~ 213 (319)
T d2ajra1 139 VISGSIPPGVNEGICNELVRLARERGVFVFVEQTPRLL-----ERIYEGPEFPNVVKPDLRGNHASFLGVDLKTFDDYVK 213 (319)
T ss_dssp EEESCCCTTSCTTHHHHHHHHHHHTTCEEEEECCHHHH-----HHHHHSSCCCSEECCCCTTCCSCBTTBCCCSHHHHHH
T ss_pred EEecCCcccccHHHHHHHHHHHHhcCCcccccchhhHH-----HHHhhhcccCcEEeeccHHHHHHHHhhccCCHHHHHH
Confidence 999843 3456788999999999999999999976542 23556778899999984 6777777655444455556
Q ss_pred HHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHh-cCCCHHHHHHH
Q 019402 240 IALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLV-QEKPVEDCVRT 318 (341)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~-~g~~~~~a~~~ 318 (341)
+++.+. +.+ +.+|||+|++|++++.++..++.+++ ++++++|||||||+|+|||+++++ +|+++++|+++
T Consensus 214 ~~~~l~------~~~-~~vvvt~G~~G~~~~~~~~~~~~~~~--~~~~vvDt~GAGDaf~ag~i~~~l~~g~~~~~a~~~ 284 (319)
T d2ajra1 214 LAEKLA------EKS-QVSVVSYEVKNDIVATREGVWLIRSK--EEIDTSHLLGAGDAYVAGMVYYFIKHGANFLEMAKF 284 (319)
T ss_dssp HHHHHH------HHS-SEEEEEETTTEEEEECSSCEEEEEES--SCCCGGGCTTHHHHHHHHHHHHHHHHCSCHHHHHHH
T ss_pred HHhhhh------hhc-ceeeeecccceeeeeccCCceEeccc--ccCCCCCCCChHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 677773 333 56789999999999877755554432 244899999999999999999976 69999999999
Q ss_pred HHHHHhhhhhhccccCCCCCCC
Q 019402 319 GCYAANVVIQRSGCTYPPKPEF 340 (341)
Q Consensus 319 A~~~aa~~v~~~g~~~p~~~e~ 340 (341)
|+++|+.++++.|..+|+.+|+
T Consensus 285 a~a~aa~~~~~~g~~~~~~~~~ 306 (319)
T d2ajra1 285 GFASALAATRRKEKYMPDLEAI 306 (319)
T ss_dssp HHHHHHHHTTSSSCCCCCHHHH
T ss_pred HHHHHHHHhCCCCCCCCCHHHH
Confidence 9999999999999988887654
|
| >d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Hypothetical fructokinase ST2478 species: Sulfolobus tokodaii [TaxId: 111955]
Probab=100.00 E-value=3.2e-39 Score=287.70 Aligned_cols=287 Identities=20% Similarity=0.217 Sum_probs=214.7
Q ss_pred eEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEEE
Q 019402 6 ILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~ 85 (341)
||++||++++|++...+ +.....++...++||.+.|+|.+|++ + |.++.++|
T Consensus 2 ki~~iG~~~~D~~~~~~-------------------------~~~~~~~~~~~~~GG~~~Nva~~l~~-l--G~~~~~i~ 53 (308)
T d2dcna1 2 KLITLGEILIEFNALSP-------------------------GPLRHVSYFEKHVAGSEANYCVAFIK-Q--GNECGIIA 53 (308)
T ss_dssp EEEEESCCEEEEEESSS-------------------------SCGGGCCEEEEEEECHHHHHHHHHHH-T--TCEEEEEC
T ss_pred EEEEECcceEEEecCCC-------------------------CceeecceeEEecCcHHHHHHHHHHH-C--CCCEEEEE
Confidence 79999999999886443 23445677788999999999999998 4 59999999
Q ss_pred eecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe----CCeecee-ecccccccCCcccCCCchhHhhhhcce
Q 019402 86 CIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV----GGERSLV-ANLSAANCYKSEHLKRPEIWSIVEKAK 159 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~----~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (341)
.+|+|.+|+.+++.|+++||+++++. ..+.+|+.+++..+ ++.++++ ...++...+..++... +.+..++
T Consensus 54 ~vG~D~~g~~i~~~L~~~gI~~~~i~~~~~~~t~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~ 129 (308)
T d2dcna1 54 KVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDE----EYVKSAD 129 (308)
T ss_dssp EEESSHHHHHHHHHHHHTTCBCTTCEEETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCH----HHHTTCS
T ss_pred EeCCcccccccccccccccccccceeeeecccceEEEEEeccccccccccceeeecccccccccccccc----cccccce
Confidence 99999999999999999999999884 57778888877654 2333333 3344445555555543 6788999
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCc--HHHHh-hhhHHHHhhCC--CCcEEEcCHHHHHHHHhhcCCCC
Q 019402 160 YYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSA--PFICE-FFREPQEKALP--YMDYVFGNETEARTFAKVHGWET 234 (341)
Q Consensus 160 ~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~--~~~~~-~~~~~~~~~l~--~~dil~~n~~E~~~l~~~~~~~~ 234 (341)
+++.+.+....... ....+..+.+.+....++... ..+.. .......+.+. ..+.+..|++|...+.. .
T Consensus 130 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 203 (308)
T d2dcna1 130 LVHSSGITLAISST-AKEAVYKAFEIASNRSFDTNIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKIILG-----E 203 (308)
T ss_dssp EEEEEHHHHHSCHH-HHHHHHHHHHHCSSEEEECCCCTTTSCHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHS-----C
T ss_pred EEEeeccccccccc-hhHHHHHHHhhccccccccceeccccchhhhhhhhhhhccccccccccchhhhhhhhcc-----h
Confidence 99998776533332 223333333334433344321 11111 11111222222 56788899999988875 4
Q ss_pred CCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHH
Q 019402 235 DNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVED 314 (341)
Q Consensus 235 ~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~ 314 (341)
.+.+++.+.+ ..+++.+|||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++
T Consensus 204 ~~~~~~~~~l-------~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDt~GAGDaf~ag~i~~l~~g~~~~~ 273 (308)
T d2dcna1 204 SDPDKAAKAF-------SDYAEIIVMKLGPKGAIVYYDGKKYYSSGYQV---PVEDVTGAGDALGGTFLSLYYKGFEMEK 273 (308)
T ss_dssp CCHHHHHHHH-------TTTEEEEEEEEETTEEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHTTTCCHHH
T ss_pred hhhhhhhhhc-------ccceeEEeeccccCceeeecCCccccccccee---eecCCCChHHHHHHHHHHHHHcCCCHHH
Confidence 5667666665 44689999999999999999999999998765 8999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhcccc--CCCCCCC
Q 019402 315 CVRTGCYAANVVIQRSGCT--YPPKPEF 340 (341)
Q Consensus 315 a~~~A~~~aa~~v~~~g~~--~p~~~e~ 340 (341)
|+++|+++|++++++.|+. +|+++|+
T Consensus 274 a~~~a~~~aa~~~~~~G~~~~~p~~~~~ 301 (308)
T d2dcna1 274 ALDYAIVASTLNVMIRGDQENLPTTKDI 301 (308)
T ss_dssp HHHHHHHHHHHHTTSSSSSTTCCCHHHH
T ss_pred HHHHHHHHHHHHhCcCCCCcCCCCHHHH
Confidence 9999999999999999984 7887764
|
| >d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Aminoimidazole riboside kinase species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=4.2e-39 Score=286.11 Aligned_cols=282 Identities=19% Similarity=0.291 Sum_probs=213.2
Q ss_pred ceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEE
Q 019402 5 GILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li 84 (341)
.||+|||++++|++.... ..+...+||.+.|+|.+|++ + |.+|.++
T Consensus 1 ~ki~viG~~~~D~i~~~~-------------------------------~~~~~~~GG~~~NvA~~l~~-l--G~~v~~v 46 (304)
T d1tyya_ 1 NKVWVIGDASVDLVPEKQ-------------------------------NSYLKCPGGASANVGVCVAR-L--GGECGFI 46 (304)
T ss_dssp CCEEEESCCEEEEEECSS-------------------------------SEEEEEEECHHHHHHHHHHH-T--TCCEEEE
T ss_pred CeEEEECccEEEEecCCC-------------------------------CeEEEccCcHHHHHHHHHHH-c--CCCEEEE
Confidence 379999999999986442 23456899999999999998 4 5999999
Q ss_pred EeecCCchhHHHHHHHHhcCCceeEee-cCCCCcceEEEEEe-CCeeceeeccccc--ccCCcccCCCchhHhhhhcceE
Q 019402 85 GCIGKDKFGEEMKKNSTAAGVNVKYYE-DESAPTGTCAVCVV-GGERSLVANLSAA--NCYKSEHLKRPEIWSIVEKAKY 160 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 160 (341)
|.+|+|.+|+++++.|++.||+++++. .....++.+++..+ ++++++....... ..+++.+.. .+...++
T Consensus 47 ~~vG~D~~g~~i~~~L~~~gi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 120 (304)
T d1tyya_ 47 GCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQDLP------PFRQYEW 120 (304)
T ss_dssp EEECSSHHHHHHHHHHHTTTEECTTEEECTTSCCCEEEEC-------CEEECCSSCGGGGCCGGGCC------CCCTTCE
T ss_pred EEecCChHHHHHHHhhhccccccccccccccccccceeeEeecccccccceecccccccccchhhhh------hhccceE
Confidence 999999999999999999999999985 45545555555555 5777765443322 234444433 3567788
Q ss_pred EEEecccc--ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHH----hhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCC
Q 019402 161 YYIAGFFL--TVSPESIQMVAEHAAAKNKVFMMNLSAPFIC----EFFREPQEKALPYMDYVFGNETEARTFAKVHGWET 234 (341)
Q Consensus 161 v~i~~~~~--~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~----~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~ 234 (341)
+++.+..+ ..+++...++++.+++.++++.+|+...... ......+...+...+....+..+...... .
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 195 (304)
T d1tyya_ 121 FYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSG-----A 195 (304)
T ss_dssp EEEEHHHHSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHC-----C
T ss_pred EEEecccccccchHHHHHHHHHHhhhcCceEeeccccccccccchhhhhhhhhhcccccccccccccccccccc-----c
Confidence 88887653 2235678889999999999999998643221 11333455666778888888887665543 2
Q ss_pred CCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCC---
Q 019402 235 DNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKP--- 311 (341)
Q Consensus 235 ~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~--- 311 (341)
+....+.+.+ ...+++.+|+|+|++|++++++++.+++|++++ +++||+||||+|+|||+++|++|++
T Consensus 196 ~~~~~a~~~~------~~~g~~~vivt~G~~Ga~~~~~~~~~~~p~~~v---~vvdt~GAGDaf~ag~~~~l~~g~~~~~ 266 (304)
T d1tyya_ 196 SHWQDARYYL------RDLGCDTTIISLGADGALLITAEGEFHFPAPRV---DVVDTTGAGDAFVGGLLFTLSRANCWDH 266 (304)
T ss_dssp SSGGGGSSTT------GGGTCSCEEEECGGGCEEEESSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHTTSSSCCH
T ss_pred chHHHHHHHH------HhcccceeeeecccceeeeeccCCccccCcccc---cCCCCCCchHHHHHHHHHHHHhCCCccc
Confidence 3344444444 456789999999999999999999999987765 8999999999999999999999988
Q ss_pred --HHHHHHHHHHHHhhhhhhccc--cCCCCCCC
Q 019402 312 --VEDCVRTGCYAANVVIQRSGC--TYPPKPEF 340 (341)
Q Consensus 312 --~~~a~~~A~~~aa~~v~~~g~--~~p~~~e~ 340 (341)
+++|+++|+++|+++|++.|+ .+|+++|+
T Consensus 267 ~~l~~al~~a~~~As~~v~~~G~~~~~P~~~ev 299 (304)
T d1tyya_ 267 ALLAEAISNANACGAMAVTAKGAMTALPFPDQL 299 (304)
T ss_dssp HHHHHHHHHHHHHHHHGGGSSSTTTTCCCHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCCCCCHHHH
Confidence 789999999999999999997 46887765
|
| >d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Hypothetical protein TM0415 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=5.4e-35 Score=257.85 Aligned_cols=264 Identities=18% Similarity=0.159 Sum_probs=194.2
Q ss_pred ceEEEecCceeeeEeecCHHHHHHcCCCCCceEEecCcccchHHHHhccCCceeecCchhHHHHHHHHHHhCCCCceEEE
Q 019402 5 GILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKENVEYIAGGATQNSIKVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~i~~iG~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li 84 (341)
..|+++|++++|++...+ ..+..+||++.|+|.++++ | |.++.++
T Consensus 7 ~~i~~vg~~~~d~~~~~~--------------------------------~~~~~~GG~~~n~a~~~~~-l--G~~~~~i 51 (288)
T d1vk4a_ 7 HMITFIGHVSKDVNVVDG--------------------------------KREIAYGGGVVMGAITSSL-L--GVKTKVI 51 (288)
T ss_dssp SEEEEECCCEEEEEEETT--------------------------------EEEEEEECHHHHHHHHHHH-T--TCEEEEE
T ss_pred ceEEEECCceeeEEecCC--------------------------------cEEEecCCHHHHHHHHHHH-c--CCCEEEE
Confidence 369999999999887654 2467899999999999998 4 5999999
Q ss_pred EeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCCchhHhhhhcceEEEEe
Q 019402 85 GCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKAKYYYIA 164 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~ 164 (341)
|.+|+|..|. .+.|++.||+++++.. +.+|+...+...+++++..........++.+++. ..+++++++.
T Consensus 52 ~~vG~D~~~~--~~~l~~~gi~~~~i~~-~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 121 (288)
T d1vk4a_ 52 TKCTREDVSK--FSFLRDNGVEVVFLKS-PRTTSIENRYGSDPDTRESFLISAADPFTESDLA-------FIEGEAVHIN 121 (288)
T ss_dssp EEECTTTGGG--GTTTGGGTCEEEEEEC-SSCEEEEEEC-----CCEEEEEECCCCCCGGGGG-------GCCSSEEEEC
T ss_pred EEeCCChHHH--HHHHHHcCCcEEeecc-CCcceEEEEEecCCCeeEEEeehhhhcCChhhhh-------hhccceEEEc
Confidence 9999999886 4889999999999863 3445555555555555444444444455554443 2357888887
Q ss_pred ccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHH-------hhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCCCCCCH
Q 019402 165 GFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFIC-------EFFREPQEKALPYMDYVFGNETEARTFAKVHGWETDNV 237 (341)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~-------~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~ 237 (341)
+... .+...++++.+++.+..+.+|+....+. ....+.+.++++++|++++|++|++.+++ ....
T Consensus 122 ~~~~---~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~i~~N~~E~~~l~~-----~~~~ 193 (288)
T d1vk4a_ 122 PLWY---GEFPEDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLKYLDLFKVDSREAETLTG-----TNDL 193 (288)
T ss_dssp CSST---TSSCGGGHHHHHHHCSEEEEETHHHHEEEETTEEEECCCTTHHHHGGGCSEEEEEHHHHHHHHS-----CSCH
T ss_pred hhhh---ccchHHHHHHHHHhCcceeeccccccccccccccccccHHHHHHHHHhCCcccCCHHHHHHHhh-----hhhH
Confidence 6432 2233455667788889998888533211 11234477889999999999999999986 4567
Q ss_pred HHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHh-cCCCHHHHH
Q 019402 238 EEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLV-QEKPVEDCV 316 (341)
Q Consensus 238 ~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~-~g~~~~~a~ 316 (341)
++.+..+. ..+.. +|++.|..|+.++ ++..++++.+++ +++|||||||+|+|||+++++ +|+++++|+
T Consensus 194 ~~~~~~~~------~~~~~-~v~~~g~~~~~~~-~~~~~~~~~~~~---~vvDttGAGDsF~ag~i~~~l~~g~~~~~a~ 262 (288)
T d1vk4a_ 194 RESCRIIR------SFGAK-IILATHASGVIVF-DGNFYEASFRSW---SLEGRTGRGDTCTAAFLVGFVFKKMSIEKAT 262 (288)
T ss_dssp HHHHHHHH------HTTCS-SEEEEETTEEEEE-SSSEEEEECCCS---SGGGGTTHHHHHHHHHHHHHHTSCCCHHHHH
T ss_pred HHHHhhhh------cccce-eeeccccceeecc-ccccccccCCCC---ccCCCCCHHHHHHHHHHHHHHHCCCCHHHHH
Confidence 77777773 33333 5666677777665 566667665544 899999999999999999965 789999999
Q ss_pred HHHHHHHhhhhhhccc
Q 019402 317 RTGCYAANVVIQRSGC 332 (341)
Q Consensus 317 ~~A~~~aa~~v~~~g~ 332 (341)
++|+++|+.++++.|+
T Consensus 263 ~~A~~~Aa~~v~~~Gp 278 (288)
T d1vk4a_ 263 KFAAAVTSVKMRHPGP 278 (288)
T ss_dssp HHHHHHHHHHTTSSSS
T ss_pred HHHHHHHHHHhCcCCC
Confidence 9999999999999996
|
| >d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: PfkB-like kinase domain: Pyridoxamine kinase species: Escherichia coli [TaxId: 562]
Probab=99.67 E-value=7.6e-17 Score=140.41 Aligned_cols=166 Identities=12% Similarity=0.085 Sum_probs=119.6
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhc--CCeEEEeCCcH------HH-HhhhhHHHHhhCCCCcEEEcCHHHHHHHH
Q 019402 157 KAKYYYIAGFFLTVSPESIQMVAEHAAAK--NKVFMMNLSAP------FI-CEFFREPQEKALPYMDYVFGNETEARTFA 227 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~--~~~v~~d~~~~------~~-~~~~~~~~~~~l~~~dil~~n~~E~~~l~ 227 (341)
+.|.+.++-.......+.+.+++++.|+. +.++++||--. .. ........+++++++|++.||..|++.|+
T Consensus 75 ~~daI~tG~l~s~~~v~~i~~~l~~~k~~~p~~~~v~DPVm~d~~~~~~~~~~~~~~~~~~Llp~adiitPN~~Ea~~L~ 154 (288)
T d1vi9a_ 75 TCDAVLSGYLGSAEQGEHILGIVRQVKAANPQAKYFCDPVMGHPEKGCIVAPGVAEFHVRHGLPASDIIAPNLVELEILC 154 (288)
T ss_dssp GCCEEEECCCSCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCTTHHHHHHHTHHHHCSEECCCHHHHHHHH
T ss_pred cCCEEEEeccCChHHHHHHHHHHHHHhhccCCccEEEcceeecCCCCcCCChHHHHHHHHHhcccCCEEecCHHHHHHhh
Confidence 57777654321111235567777776654 46788998321 11 11123345678999999999999999999
Q ss_pred hhcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCC--------EEEEeCCeEEEEecccCCCCcccCCCCcchhhH
Q 019402 228 KVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADP--------VVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFV 299 (341)
Q Consensus 228 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G--------~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~ 299 (341)
+....+.++..+++++| ...|++.|+||.+..| .+++++++.+++..+.. +..+.|++|+||+|+
T Consensus 155 g~~i~~~~~~~~aa~~L------~~~g~~~Vvvt~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~GtGD~fs 227 (288)
T d1vi9a_ 155 EHAVNNVEEAVLAAREL------IAQGPQIVLVKHLARAGYSRDRFEMLLVTADEAWHISRPLV-DFGMRQPVGVGDVTS 227 (288)
T ss_dssp TSCCCSHHHHHHHHHHH------HHTSCSEEEECCCGGGSSSTTEEEEEEECSSCEEEEEEECC-CCTTCCCSCHHHHHH
T ss_pred ccccchhHHHHHHHHHH------HhcCCCEEEEEecCccccccCceeEEEEeCCceEEeccccc-ccCCCCCCChhHHHH
Confidence 87766666778888888 6678999999976543 25566666666655544 346789999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHhhhhhh
Q 019402 300 GGFLSQLVQEKPVEDCVRTGCYAANVVIQR 329 (341)
Q Consensus 300 a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~ 329 (341)
|+|+++|++|+++++|+++|.+.-...++.
T Consensus 228 a~l~a~l~~G~~l~~A~~~A~~~v~~~l~~ 257 (288)
T d1vi9a_ 228 GLLLVKLLQGATLQEALEHVTAAVYEIMVT 257 (288)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999998876555543
|
| >d1ub0a_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Thiamin biosynthesis kinases domain: 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) species: Thermus thermophilus [TaxId: 274]
Probab=99.47 E-value=3.8e-13 Score=114.82 Aligned_cols=161 Identities=16% Similarity=0.149 Sum_probs=118.2
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhcC-CeEEEeCCcHHH-------HhhhhHHHHhhCCCCcEEEcCHHHHHHHHh
Q 019402 157 KAKYYYIAGFFLTVSPESIQMVAEHAAAKN-KVFMMNLSAPFI-------CEFFREPQEKALPYMDYVFGNETEARTFAK 228 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~-~~v~~d~~~~~~-------~~~~~~~~~~~l~~~dil~~n~~E~~~l~~ 228 (341)
..|.+.+.- -.+.+....+.+..++.. .++++||-.... ........+++++.+|++.||..|+..|++
T Consensus 70 ~~daIkiG~---l~s~~~~~~i~~~l~~~~~~~~v~dpv~~~~~~~~~~~~~~~~~~~~~Llp~adiiTPN~~Ea~~L~g 146 (258)
T d1ub0a_ 70 PLHAAKTGA---LGDAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEALLG 146 (258)
T ss_dssp CCSEEEECC---CCSHHHHHHHHHHHHHTTCCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHHHC
T ss_pred CccEEEEec---cccchHHHHHHHHHHHhccccceEeeeeecccCccccchhHHHHHHHhhcccceeecCCHHHHhhhcC
Confidence 568888753 234555555556555544 557777742111 111334466799999999999999999998
Q ss_pred hcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCC----CE-EEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHH
Q 019402 229 VHGWETDNVEEIALKISQWPKASGTHKRITVITQGAD----PV-VVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFL 303 (341)
Q Consensus 229 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~----G~-~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~ 303 (341)
....+.++..++++.| .+.|++.|+||.|.. .. +++.+++.+....++. ...++.|+||+|+++|+
T Consensus 147 ~~~~~~~d~~~aa~~L------~~~g~~~Vlitg~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~GtGd~~asaia 217 (258)
T d1ub0a_ 147 RPIRTLKEAEEAAKAL------LALGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPRV---HTRNTHGTGCTLSAAIA 217 (258)
T ss_dssp SCCCSHHHHHHHHHHH------HTTSCSCEEEEEEECC---EEEEEEETTEEEEEEECCC---CCSCCTTHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH------HHhCCCeEEEeccccccccccceeccCCeEEeccccee---cCCCCCChHHHHHHHHH
Confidence 7766666777888888 678899999997543 22 4456777777665544 56788999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHhhhhhh
Q 019402 304 SQLVQEKPVEDCVRTGCYAANVVIQR 329 (341)
Q Consensus 304 ~~l~~g~~~~~a~~~A~~~aa~~v~~ 329 (341)
+.|++|.++++|++.|...-...+..
T Consensus 218 ~~La~G~~l~~Av~~A~~~v~~~i~~ 243 (258)
T d1ub0a_ 218 ALLAKGRPLAEAVAEAKAYLTRALKT 243 (258)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999987777654
|
| >d1lhpa_ c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: PfkB-like kinase domain: Pyridoxal kinase species: Sheep (Ovis aries) [TaxId: 9940]
Probab=99.36 E-value=1.7e-12 Score=113.45 Aligned_cols=159 Identities=13% Similarity=0.134 Sum_probs=106.5
Q ss_pred hcceEEEEeccccccCH---HHHHHHHHHHHhc--CCeEEEeCCcH---------HHHhhhhHHHH-hhCCCCcEEEcCH
Q 019402 156 EKAKYYYIAGFFLTVSP---ESIQMVAEHAAAK--NKVFMMNLSAP---------FICEFFREPQE-KALPYMDYVFGNE 220 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~~---~~~~~~~~~~~~~--~~~v~~d~~~~---------~~~~~~~~~~~-~~l~~~dil~~n~ 220 (341)
.+.|.+..+ +. .+. +.+.++++..++. +.++++||--. ...+...+.++ .+++.+|++.||.
T Consensus 72 ~~~daI~tG-~l--~s~~~i~~i~~~l~~~~~~~p~~~~v~DPVmgd~~~g~g~~~~~~~~~~~~~~~Llp~adiITPN~ 148 (309)
T d1lhpa_ 72 NQYDYVLTG-YT--RDKSFLAMVVDIVQELKQQNPRLVYVCDPVMGDQRNGEGAMYVPDDLLPVYREKVVPVADIITPNQ 148 (309)
T ss_dssp CCCSEEEEC-CC--CCHHHHHHHHHHHHHHHHHCTTCEEEECCCCSSCCCSSSCSCCCGGGHHHHHHTTGGGCSEECCCH
T ss_pred cccCeeeec-cc--CCHHHHHHHHHHHHHhhccCCCCcEEEeccccccccccccccCCHHHHHHHHHhhcCcCcEEeccH
Confidence 357887654 32 233 4455666666543 46788888421 11122233344 5899999999999
Q ss_pred HHHHHHHhhcCCCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCC------CCEEEEeCC------------eEEEEeccc
Q 019402 221 TEARTFAKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGA------DPVVVAEDG------------KVKLFPVIL 282 (341)
Q Consensus 221 ~E~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~------~G~~~~~~~------------~~~~v~~~~ 282 (341)
.|++.|++....+.++..++++.| .+.|++.||||.|. .+.++..+. +.+.++.+.
T Consensus 149 ~Ea~~Ltg~~~~~~~~~~~aa~~L------~~~g~~~VvvTg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (309)
T d1lhpa_ 149 FEAELLTGRKIHSQEEALEVMDML------HSMGPDTVVITSSNLLSPRGSDYLMALGSQRTRAPDGSVVTQRIRMEMHK 222 (309)
T ss_dssp HHHHHHHTCCCCSHHHHHHHHHHH------HHHSCSEEEECCCCCCCTTCTTEEEEEEEEEEC---CCCEEEEEEEEEEC
T ss_pred HHHhHHhccccCCHHHHHHHHHHH------HhcCCCEEEEEccccCCCCCCcEEEEeccceeeeccccceeeeEEEeecc
Confidence 999999987766666778888888 56789999999764 222322111 112333333
Q ss_pred CCCCcccCCCCcchhhHHHHHHHHhcC-CCHHHHHHHHHHHHhhhh
Q 019402 283 LPKEKLVDTNGAGDAFVGGFLSQLVQE-KPVEDCVRTGCYAANVVI 327 (341)
Q Consensus 283 ~~~~~vvdttGAGDaf~a~~~~~l~~g-~~~~~a~~~A~~~aa~~v 327 (341)
+ + .+++|+||+|+|+|++++++| .++++|++.|.+.-...+
T Consensus 223 i---~-~~~~GtGD~fsa~l~a~l~~g~~~L~~A~~~A~~~v~~~l 264 (309)
T d1lhpa_ 223 V---D-AVFVGTGDLFAAMLLAWTHKHPNNLKVACEKTVSAMHHVL 264 (309)
T ss_dssp C---S-SCCSSHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHH
T ss_pred c---C-CCCCcccHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 3 2 467999999999999999987 589999999987744443
|
| >d1jxha_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Thiamin biosynthesis kinases domain: 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) species: Salmonella typhimurium [TaxId: 90371]
Probab=99.31 E-value=9.5e-12 Score=106.35 Aligned_cols=162 Identities=9% Similarity=0.064 Sum_probs=109.4
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhcC-CeEEEeCCcHHH------Hhh-hhHHHHhhCCCCcEEEcCHHHHHHHHh
Q 019402 157 KAKYYYIAGFFLTVSPESIQMVAEHAAAKN-KVFMMNLSAPFI------CEF-FREPQEKALPYMDYVFGNETEARTFAK 228 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~-~~v~~d~~~~~~------~~~-~~~~~~~~l~~~dil~~n~~E~~~l~~ 228 (341)
+.|.+.+.- -.+.+.+..+.+.+++.. .++++||-.... ... .....+++++.+|++.||..|+..|++
T Consensus 72 ~~~aIkiG~---l~s~~~i~~v~~~l~~~~~~~~vvdpv~~~~~~~~~~~~~~~~~~~~~Llp~adviTPN~~Ea~~Ll~ 148 (266)
T d1jxha_ 72 RIDTTKIGM---LAETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALLD 148 (266)
T ss_dssp CCSEEEECC---CCSHHHHHHHHHHHHHTTCCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBHHHHHHHHT
T ss_pred cCceEEEcc---cchHHHHHHHHHHHHhccCCceEEeccccccccchhhHHHHHHHHHHHhhhhhheecCCHHHHHHHhc
Confidence 567777653 235666666666666654 457777732111 111 223345689999999999999998876
Q ss_pred hcC-CCCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCC-----EEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHH
Q 019402 229 VHG-WETDNVEEIALKISQWPKASGTHKRITVITQGADP-----VVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGF 302 (341)
Q Consensus 229 ~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G-----~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~ 302 (341)
... .+.++..++++.+ .+.|++.|++|-|... .+++.++..+....++. ...++.|.||+|++++
T Consensus 149 ~~~~~~~~~~~~aa~~l------~~~g~~~Vlikg~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~hGTGc~lasai 219 (266)
T d1jxha_ 149 APHARTEQEMLAQGRAL------LAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRV---NTKNTHGTGCTLSAAL 219 (266)
T ss_dssp CCCCCSHHHHHHHHHHH------HHTTCSEEEEBC---------CEEECSSCEEEC---CC---CCSCCBTHHHHHHHHH
T ss_pred CCcccChHHHHHHHHHH------HhcCCceEEEeccccCCCcceEEEEcCCceEEEeeccc---cCCCCCCchHHHHHHH
Confidence 432 2334556777888 5678999999976532 24455555555444433 5567889999999999
Q ss_pred HHHHhcCCCHHHHHHHHHHHHhhhhhhc
Q 019402 303 LSQLVQEKPVEDCVRTGCYAANVVIQRS 330 (341)
Q Consensus 303 ~~~l~~g~~~~~a~~~A~~~aa~~v~~~ 330 (341)
++.|++|+++++|++.|.......+...
T Consensus 220 aa~La~G~~l~~Av~~A~~~v~~~i~~s 247 (266)
T d1jxha_ 220 AALRPRHRSWGETVNEAKAWLSAALAQA 247 (266)
T ss_dssp HHHGGGSSSHHHHHHHHHHHHHHHHTTG
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999888887653
|
| >d1ekqa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Thiamin biosynthesis kinases domain: Hydroxyethylthiazole kinase (THZ kinase, ThiK) species: Bacillus subtilis [TaxId: 1423]
Probab=98.82 E-value=1.8e-08 Score=84.99 Aligned_cols=161 Identities=15% Similarity=0.082 Sum_probs=102.9
Q ss_pred hHhhhhcceEEEEecccccc-CHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCC--CCcEEEcCHHHHHHHH
Q 019402 151 IWSIVEKAKYYYIAGFFLTV-SPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP--YMDYVFGNETEARTFA 227 (341)
Q Consensus 151 ~~~~~~~~~~v~i~~~~~~~-~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~--~~dil~~n~~E~~~l~ 227 (341)
..+..+.+|.+++..-.+.- ..+.+...++.+++.++|+++||-.-.......+...++++ +.++|.+|..|+..|.
T Consensus 52 ~~e~~~~a~alviN~Gtl~~~~~~~m~~a~~~a~~~~~PvVLDPVgvgas~~R~~~~~~ll~~~~~tVI~gN~~Ei~~L~ 131 (269)
T d1ekqa_ 52 VADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAHTV 131 (269)
T ss_dssp HHHHHHHSSEEEEECTTCCHHHHHHHHHHHHHHHHTTCCEEEECTTBTTBHHHHHHHHHHHHHSCCSEEEECHHHHHHHC
T ss_pred HHHHHHhccceEEecCCCCHHHHHHHHHHHHHHHHcCCCEEECCcCCCCchhHHHHHHHHHHhCCCceEcCCHHHHHHHh
Confidence 45677889999997543211 12566777788899999999999542211222334445543 4699999999999998
Q ss_pred hhcC-----C----CCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhh
Q 019402 228 KVHG-----W----ETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAF 298 (341)
Q Consensus 228 ~~~~-----~----~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf 298 (341)
+... . +.++..++++++.+ +.-..|++| |+ .-++.++++.+.+..-.. ..-..+|.||++
T Consensus 132 g~~~~~~~gvd~~~~~~d~~~~A~~la~------~~~~vVvlk-G~-~D~I~dg~~~~~~~~G~~---~m~~itGtGc~L 200 (269)
T d1ekqa_ 132 GVTDWLIKGVDAGEGGGDIIRLAQQAAQ------KLNTVIAIT-GE-VDVIADTSHVYTLHNGHK---LLTKVTGAGCLL 200 (269)
T ss_dssp C---------------HHHHHHHHHHHH------HHTSEEEEC-SS-SEEEECSSCEEEECCCCG---GGGGSTTHHHHH
T ss_pred CCccCCcCCcCCcccHHHHHHHHHHHHH------hcCCEEEec-CC-ceEEEeCCeeEEecCCCh---hhccCCcchHHH
Confidence 6431 1 12334456666632 223445555 55 345666677776653211 233458999999
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHH
Q 019402 299 VGGFLSQLVQEKPVEDCVRTGCYA 322 (341)
Q Consensus 299 ~a~~~~~l~~g~~~~~a~~~A~~~ 322 (341)
.|.+.+.+.++.++.+|+..|...
T Consensus 201 s~~iaa~la~~~~~~~A~~~A~~~ 224 (269)
T d1ekqa_ 201 TSVVGAFCAVEENPLFAAIAAISS 224 (269)
T ss_dssp HHHHHHHHTTCSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHH
Confidence 999999999999988888776654
|
| >d1v8aa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Thiamin biosynthesis kinases domain: Hydroxyethylthiazole kinase (THZ kinase, ThiK) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.50 E-value=6.9e-07 Score=74.90 Aligned_cols=160 Identities=13% Similarity=0.042 Sum_probs=95.5
Q ss_pred hhHhhhhcceEEEEecccccc-CHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCC-CCcEEEcCHHHHHHHH
Q 019402 150 EIWSIVEKAKYYYIAGFFLTV-SPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALP-YMDYVFGNETEARTFA 227 (341)
Q Consensus 150 ~~~~~~~~~~~v~i~~~~~~~-~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~-~~dil~~n~~E~~~l~ 227 (341)
|..+..+.++.+++..-++.- ..+.+...++.+++.++|+++||-.........+...+++. +.++|.+|..|+..|.
T Consensus 49 E~~e~~~~a~al~iN~Gtl~~~~~~~m~~a~~~A~~~~~PvVLDPVgvgas~~R~~~~~~ll~~~~~vItgN~~Ei~~L~ 128 (264)
T d1v8aa_ 49 ELEEMIRLADAVVINIGTLDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISALL 128 (264)
T ss_dssp THHHHHHHCSEEEEECTTCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHHH
T ss_pred HHHHHHHhcCceEeeCCCCCHHHHHHHHHHHHHHHHcCCCEEEcCcccCcchhHHHHHHHHhccCCcEEcCCHHHHHHHh
Confidence 345677788889887543211 12567777788899999999998442211111222333332 5799999999999999
Q ss_pred hhcCCC---------CCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhh
Q 019402 228 KVHGWE---------TDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAF 298 (341)
Q Consensus 228 ~~~~~~---------~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf 298 (341)
+..... .++..++++.+.+ +.-..|++ .|+. -++.++++.+.++.-.. ..-..+|.||++
T Consensus 129 g~~~~~~gvd~~~~~~~d~~~~a~~lA~------~~~~vVvl-kG~~-D~I~dg~~~~~~~~G~~---~m~~itGtGc~L 197 (264)
T d1v8aa_ 129 GEEGKTRGVDSLEYGEEEAKKLTMNAAR------EFNTTVAV-TGAV-DYVSDGRRTFAVYNGHE---LLGRVTGTGCMV 197 (264)
T ss_dssp HHHC----------CHHHHHHHHHHHHH------HTTSEEEE-ESSS-EEEECSSCEEEECCCCG---GGGGSTTHHHHH
T ss_pred CcccCCCCCCcccccHHHHHHHHHHHHH------HhCCEEEe-cCCe-eEEEcCCEEEEeCCCCc---hhccCCcccHHH
Confidence 864321 1234455666632 11234445 4764 45566777776653221 233468999997
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHH
Q 019402 299 VGGFLSQLVQEKPVEDCVRTGCY 321 (341)
Q Consensus 299 ~a~~~~~l~~g~~~~~a~~~A~~ 321 (341)
.+.+.+.+.++. ..+|+..|..
T Consensus 198 s~~iaa~la~~~-~~~Aa~~A~~ 219 (264)
T d1v8aa_ 198 AALTGAFVAVTE-PLKATTSALV 219 (264)
T ss_dssp HHHHHHHHTTSC-HHHHHHHHHH
T ss_pred HHHHHHHHhcCC-HHHHHHHHHH
Confidence 776666666664 4455554443
|
| >d1u2xa_ c.72.1.3 (A:) ADP-specific phosphofructokinase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: ADP-specific Phosphofructokinase/Glucokinase domain: ADP-specific phosphofructokinase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.30 E-value=1.4e-05 Score=71.44 Aligned_cols=75 Identities=12% Similarity=0.059 Sum_probs=54.8
Q ss_pred hcceEEEEecccccc----C---H----HHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHH
Q 019402 156 EKAKYYYIAGFFLTV----S---P----ESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEAR 224 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~----~---~----~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~ 224 (341)
.+.|.++++|+.+.. + . +.+.+.+...+..++++.+++.+..........+..+++++|-+=+|++|+.
T Consensus 213 ~~~dl~vlSGlq~l~~~~~~~~~~~~~l~~~~~~l~~~~~~~i~iHlElAs~~d~~l~~~i~~~ilp~vDSlGmNEqEL~ 292 (450)
T d1u2xa_ 213 KEVDGAIFSGYQGLRTKYSDGKDANYYLRRAKEDIIEFKEKDVKIHVEFASVQDRKLRKKIITNILPFVDSVGIDEAEIA 292 (450)
T ss_dssp HTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHHHTTCEEEEECCCCCCHHHHHHHHHHHGGGSSEEEEEHHHHH
T ss_pred cCCCEEEEechhhhhccccCchhHHHHHHHHHHHHHhCCCCCCeEEEEecccchHHHHHHHHHHhccccccCCCCHHHHH
Confidence 357999999998531 1 1 2233444444567899999998766555566777889999999999999998
Q ss_pred HHHhhc
Q 019402 225 TFAKVH 230 (341)
Q Consensus 225 ~l~~~~ 230 (341)
.+....
T Consensus 293 ~l~~~l 298 (450)
T d1u2xa_ 293 QILSVL 298 (450)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 886533
|
| >d1kyha_ c.72.1.4 (A:) Hypothetical protein YxkO {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: YjeF C-terminal domain-like domain: Hypothetical protein YxkO species: Bacillus subtilis [TaxId: 1423]
Probab=98.11 E-value=4.9e-06 Score=70.25 Aligned_cols=147 Identities=18% Similarity=0.134 Sum_probs=96.2
Q ss_pred hcceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCC-CC
Q 019402 156 EKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGW-ET 234 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~-~~ 234 (341)
+..|.+.+.+- +. ..+....+++.+.+.+.++++|.....+ ......+...++.||.-|+..|++.... ..
T Consensus 93 ~~~~~~~iGpG-lg-~~~~~~~~~~~l~~~~~p~VlDAdal~~------~~~~~~~~~~IiTPH~gE~~rL~g~~~~~~~ 164 (275)
T d1kyha_ 93 ETYRAIAIGPG-LP-QTESVQQAVDHVLTADCPVILDAGALAK------RTYPKREGPVILTPHPGEFFRMTGVPVNELQ 164 (275)
T ss_dssp SCCSEEEECTT-CC-SSHHHHHHHHHHTTSSSCEEECGGGCCS------CCCCCCSSCEEECCCHHHHHHHHCCCHHHHT
T ss_pred hccceEEEecc-cc-chHHHHHHHHHHhhccCceeehhhhhhh------hhcccccCceEecccHHHHHHhcCcccchhh
Confidence 46788888652 22 2345666777787888999999864321 0112234466788999999999863221 13
Q ss_pred CCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCHHH
Q 019402 235 DNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVED 314 (341)
Q Consensus 235 ~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~ 314 (341)
.+..++++++.+. ...+|+-.|........+++.+..+ ... ....+.|.||.++|.+...+++|.++.+
T Consensus 165 ~~~~~~a~~~~~~-------~~~~vllKG~~t~I~~~~g~~~~~~-~g~---~~lat~GsGDvLaGiIa~~lAq~~~~~~ 233 (275)
T d1kyha_ 165 KKRAEYAKEWAAQ-------LQTVIVLKGNQTVIAFPDGDCWLNP-TGN---GALAKGGTGDTLTGMILGMLCCHEDPKH 233 (275)
T ss_dssp TSHHHHHHHHHHH-------HTSEEEECSTTCEEECTTSCEEECC-CCC---GGGCSTTHHHHHHHHHHHHHHHCSSHHH
T ss_pred ccHHHHHHHHHHH-------hCCeEEeccCcceEEcCCCceeecC-CCC---ccccCCccccHHHHHHHHHHHcCCCHHH
Confidence 4555666666321 2335556677554444345555433 222 4578999999999999999999999999
Q ss_pred HHHHHHH
Q 019402 315 CVRTGCY 321 (341)
Q Consensus 315 a~~~A~~ 321 (341)
|+..|+.
T Consensus 234 Aa~~a~~ 240 (275)
T d1kyha_ 234 AVLNAVY 240 (275)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999954
|
| >d1gc5a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: ADP-specific Phosphofructokinase/Glucokinase domain: ADP-dependent glucokinase species: Archaeon Thermococcus litoralis [TaxId: 2265]
Probab=98.06 E-value=8.7e-05 Score=66.50 Aligned_cols=168 Identities=11% Similarity=-0.052 Sum_probs=91.2
Q ss_pred CCceeecCchhHHHHHHHHHHhCCCCceEEEEeecCCchhHHHHHHHHhcCCceeEeecC--------------CCCcce
Q 019402 54 ENVEYIAGGATQNSIKVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDE--------------SAPTGT 119 (341)
Q Consensus 54 ~~~~~~~GG~~~n~a~~l~~l~~lg~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~--------------~~~t~~ 119 (341)
.......||.+..+|..|+.+ + +.+|.+.++++.. .-.+.+++.. +.+.... +.+.-.
T Consensus 112 ~~~~~rmGGnAgimAn~La~l-~-~~~vi~~~p~~~k----~q~~lf~~~~--i~~P~v~~~~~~l~~p~e~~~~e~d~I 183 (467)
T d1gc5a_ 112 GWDELRIGGQAGIMANLLGGV-Y-RIPTIVHVPQNPK----LQAELFVDGP--IYVPVFEGNKLKLVHPKDAIAEEEELI 183 (467)
T ss_dssp CCSEEEEESHHHHHHHHHHHT-S-CCCEEECCSCCCH----HHHTTSCSSS--EEEEEECSSCEEEECGGGSCCSCCCCE
T ss_pred cchhcccCCHHHHHHHHHHhc-C-CceEEEecCcchH----HHHHHhcCCC--cccceecCCceeecCchhhccCCCCce
Confidence 455678999999999998873 3 3677777776653 2223333221 2111111 111222
Q ss_pred -EEEEEeCCeece-eecccccccCC-----cccCCC-chhHhhh----hcceEEEEecccccc----CH-------HHHH
Q 019402 120 -CAVCVVGGERSL-VANLSAANCYK-----SEHLKR-PEIWSIV----EKAKYYYIAGFFLTV----SP-------ESIQ 176 (341)
Q Consensus 120 -~~~~~~~g~~~~-~~~~~~~~~~~-----~~~~~~-~~~~~~~----~~~~~v~i~~~~~~~----~~-------~~~~ 176 (341)
.++.+..|++.. +..+-+|+.+- ...+.. +++.+.+ .+.|.++++|+.+.- .. +.+.
T Consensus 184 HlIlEY~~G~~wg~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~~~~~~~dl~vlSGlqml~~~~~~~~~~~~~l~~~~ 263 (467)
T d1gc5a_ 184 HYIYEFPRGFQVFDVQAPRENRFIANADDYNARVYMRREFREGFEEITRNVELAIISGLQVLKEYYPDGTTYKDVLDRVE 263 (467)
T ss_dssp EEEEEECSSCEETTEECSSCEEEEEECCSSTTTTCCCHHHHHSHHHHHTTCSEEEECCGGGCCSBCTTSCBHHHHHHHHH
T ss_pred EEEEEeCCCCeecceecCCCCeEEEeCCCCCccCcccHHHHHHHHhhccCCCEEEEEchhhccccCCCchhHHHHHHHHH
Confidence 222233454321 12222222111 111211 2232333 368999999997532 11 2334
Q ss_pred HHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhc
Q 019402 177 MVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVH 230 (341)
Q Consensus 177 ~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~ 230 (341)
+.+...++.++++.+++....... ....+.+.++++|-+=+|++|+..+....
T Consensus 264 ~~l~~l~~~~i~iH~ElAs~~d~~-l~~~i~~ilp~vDSlGmNEqEL~~l~~~l 316 (467)
T d1gc5a_ 264 SHLNILNRYNVKSHFEFAYTANRR-VREALVELLPKFTSVGLNEVELASIMEII 316 (467)
T ss_dssp HHHHHHHHTTCEEEEECCCCCCHH-HHHHHHHHGGGCSEEEECHHHHHHHHHHT
T ss_pred HHHHhcCcCCCceEEEecchhhHH-HHHHHHHhccccccCCCCHHHHHHHHHhc
Confidence 444455567899999998554333 23334568999999999999998777544
|
| >d1ua4a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: ADP-specific Phosphofructokinase/Glucokinase domain: ADP-dependent glucokinase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=98.04 E-value=3.1e-05 Score=69.27 Aligned_cols=73 Identities=14% Similarity=0.065 Sum_probs=50.8
Q ss_pred hcceEEEEeccccc-cC--H---HHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhh
Q 019402 156 EKAKYYYIAGFFLT-VS--P---ESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKV 229 (341)
Q Consensus 156 ~~~~~v~i~~~~~~-~~--~---~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~ 229 (341)
.+.|.++++|+.+. .. . +...+.+...++.++++.+++....... .+..+.++++++|-+=+|++|+..+...
T Consensus 223 ~~~dl~vlSGlqmm~~~~~~~~~~~~~~~l~~~~~~~i~IH~ElAs~~d~~-l~~~i~~vlp~vDSlGmNEqEL~~l~~~ 301 (454)
T d1ua4a_ 223 KNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNEREIPVHLEFAFTPDEK-VREEILNVLGMFYSVGLNEVELASIMEI 301 (454)
T ss_dssp GGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHHTTCCEEEECCCCCCHH-HHHHHHHHGGGCSEEEECHHHHHHHHHH
T ss_pred cCCCEEEEEccccccchhhHHHHHHHHHHHHhcCccCCceEEEeccccHHH-HHHHHHHhCCcCCcCCCCHHHHHHHHHH
Confidence 46899999999842 11 1 2334444455567899999998644322 3334557999999999999999988653
|
| >d2ax3a1 c.72.1.4 (A:212-489) Hypothetical protein TM0922, C-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: YjeF C-terminal domain-like domain: Hypothetical protein TM0922, C-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=97.98 E-value=3.3e-05 Score=65.19 Aligned_cols=156 Identities=13% Similarity=0.064 Sum_probs=96.7
Q ss_pred hhhhcceEEEEeccccccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhhcCC
Q 019402 153 SIVEKAKYYYIAGFFLTVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKVHGW 232 (341)
Q Consensus 153 ~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~ 232 (341)
+..+..+.+.+.+ .+.........+.+.......++++|...... .... .....+..-|+.|+.-|++.|++....
T Consensus 93 ~~~~~~~a~~iGp-Glg~~~~~~~~~~~~~~~~~~~~vldadal~~--~~~~-~l~~~~~~~IlTPH~gE~~rL~~~~~~ 168 (278)
T d2ax3a1 93 ELSKDVDVVAIGP-GLGNNEHVREFVNEFLKTLEKPAVIDADAINV--LDTS-VLKERKSPAVLTPHPGEMARLVKKTVG 168 (278)
T ss_dssp HHHHTCSEEEECT-TCCCSHHHHHHHHHHHHHCCSCEEECHHHHHT--CCHH-HHHTCSSCEEECCCHHHHHHHHTCCHH
T ss_pred HhcccCCEEEecC-CcccchHHHHHHHHHHhccchheecchhhhhh--hhhh-hhhhcCCCEEeCCCHhHHHHHhhcccc
Confidence 4567789998875 23344555555555666777888888744321 1112 222234456778999999999874322
Q ss_pred CCCCHHHHHHHHhcCCCCCCCCccEEEEeeCCCCEEEEeCCeEEEEecccCCCCcccCCCCcchhhHHHHHHHHhcCCCH
Q 019402 233 ETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPV 312 (341)
Q Consensus 233 ~~~~~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~v~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~ 312 (341)
+..+..+.++.+.+. ...+|+-.|. ..++.++++.+..+.. . ....+.|.||..+|.+..-++++.++
T Consensus 169 ~~~~~~~~a~~~a~~-------~~~~vvlKG~-~t~i~~~~~~~~~~~g-~---~~la~~GtGDvLaGiIaallAq~~~~ 236 (278)
T d2ax3a1 169 DVKYNYELAEEFAKE-------NDCVLVLKSA-TTIVTDGEKTLFNITG-N---TGLSKGGSGDVLTGMIAGFIAQGLSP 236 (278)
T ss_dssp HHTTCHHHHHHHHHH-------HTSEEEECSS-SEEEECSSCEEEECCC-C----CCSSTTHHHHHHHHHHHHHHTTCCH
T ss_pred hhhhHHHHHHHHHHH-------cCCcEEecCc-cccccCcccceeecCC-C---CccccccchhHHHHHHHHHHHcCCCH
Confidence 222334455555321 1224444455 4566666666654432 2 45688999999999888888999999
Q ss_pred HHHHHHHHHHHh
Q 019402 313 EDCVRTGCYAAN 324 (341)
Q Consensus 313 ~~a~~~A~~~aa 324 (341)
.+|+..|+..-+
T Consensus 237 ~~A~~~a~~lhg 248 (278)
T d2ax3a1 237 LEASTVSVYLHG 248 (278)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999998865443
|
| >d1l2la_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: ADP-specific Phosphofructokinase/Glucokinase domain: ADP-dependent glucokinase species: Archaeon Thermococcus litoralis [TaxId: 2265]
Probab=97.77 E-value=0.00016 Score=64.61 Aligned_cols=74 Identities=15% Similarity=0.022 Sum_probs=51.9
Q ss_pred hcceEEEEecccccc--C-H---HHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHhh
Q 019402 156 EKAKYYYIAGFFLTV--S-P---ESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAKV 229 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~--~-~---~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~ 229 (341)
.+.|.++++|+.+.- + . +.+.+.++..+..++++.+++..... +..+..+.++++++|-+=+|++|+..+...
T Consensus 221 ~~pdl~vlSGlq~l~~~~~~~~~~~~~~~l~~~~~~~i~iH~ElAs~~d-~~~~~~l~~vlp~vdSlGmNEqEL~~l~~~ 299 (451)
T d1l2la_ 221 KRSELAIISGLHPLTQENHGKPIKLVREHLKILNDLGIRAHLEFAFTPD-EVVRLEIVKLLKHFYSVGLNEVELASVVSV 299 (451)
T ss_dssp TTCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHHTTCEEEEECCCCSS-HHHHHHHHHHGGGCSEEEECHHHHHHHHHH
T ss_pred cCCCEEEEecccccccccchHHHHHHHHHHHhcCCcCCcEEEEeccchH-HHHHHHHHHhcccCccCCcCHHHHHHHHHH
Confidence 468999999998521 1 1 33444555566778999999975432 223344557999999999999999877653
Q ss_pred c
Q 019402 230 H 230 (341)
Q Consensus 230 ~ 230 (341)
.
T Consensus 300 l 300 (451)
T d1l2la_ 300 M 300 (451)
T ss_dssp T
T ss_pred h
Confidence 3
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=83.09 E-value=1.4 Score=32.37 Aligned_cols=125 Identities=13% Similarity=0.171 Sum_probs=69.6
Q ss_pred CceEEEEeecCCchhHHHHHHHHhcCCceeEeecCCCCcceEEEEEeCCeeceeecccccccCCcccCCCchhHhhhhcc
Q 019402 79 GATSYIGCIGKDKFGEEMKKNSTAAGVNVKYYEDESAPTGTCAVCVVGGERSLVANLSAANCYKSEHLKRPEIWSIVEKA 158 (341)
Q Consensus 79 ~~v~li~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (341)
.++.++| ....|+.+.+.|...|+..-.+. .+ | .++..-. . ..+........+..+.+.++
T Consensus 25 ~~ilviG---aG~~g~~v~~~L~~~g~~~i~v~--nR-t---------~~ka~~l--~--~~~~~~~~~~~~~~~~l~~~ 85 (159)
T d1gpja2 25 KTVLVVG---AGEMGKTVAKSLVDRGVRAVLVA--NR-T---------YERAVEL--A--RDLGGEAVRFDELVDHLARS 85 (159)
T ss_dssp CEEEEES---CCHHHHHHHHHHHHHCCSEEEEE--CS-S---------HHHHHHH--H--HHHTCEECCGGGHHHHHHTC
T ss_pred CeEEEEC---CCHHHHHHHHHHHhcCCcEEEEE--cC-c---------HHHHHHH--H--HhhhcccccchhHHHHhccC
Confidence 4555555 44689999999999988644432 11 1 0111000 0 00111111112234678899
Q ss_pred eEEEEecccc--ccCHHHHHHHHHHHHhcCCeEEEeCCcHHHHhhhhHHHHhhCCCCcEEEcCHHHHHHHHh
Q 019402 159 KYYYIAGFFL--TVSPESIQMVAEHAAAKNKVFMMNLSAPFICEFFREPQEKALPYMDYVFGNETEARTFAK 228 (341)
Q Consensus 159 ~~v~i~~~~~--~~~~~~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~ 228 (341)
|+++.+.... .+..+.+...++.-+.....+++|++.|.. .-..+-...++...|.++++.+..
T Consensus 86 Divi~atss~~~ii~~~~i~~~~~~r~~~~~~~iiDlavPr~------vd~~v~~~~~v~l~~ld~l~~~~~ 151 (159)
T d1gpja2 86 DVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPRD------VEEGVENIEDVEVRTIDDLRVIAR 151 (159)
T ss_dssp SEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSCS------BCTTGGGSTTEEEEEHHHHHHHHH
T ss_pred CEEEEecCCCCccccHhhhHHHHHhcccCCCeEEEeecCCCC------cChhhhccCCeEEEeHHHHHHHHH
Confidence 9999886542 355666666655433334458999986641 111233345788889999887764
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