Citrus Sinensis ID: 019439

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-
Protein Sequence
MNWNAPINSWWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLNPMPDLENRISDLQYQILDNENVASTNEPSDS
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHEEccccccccccccHHHcccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mnwnapinswwRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIAdlgvdapvtQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNflvnkayqfssitsvtlLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLlsdaggdgggsrpllGDVLVIAGTIFFatsnvgeeffvkkkdRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYsttekdlnpmpdlenrISDLQYQildnenvastnepsds
Flexible Loop (DISEMBL)
mnwnapinswwRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSRPLLGDVLVIAGTIFFatsnvgeeffvkkkdrVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLNPMPDLENRISDLQYQILdnenvastnepsds
Low Complexity Region (SEG)
MNWNAPINSWWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQllgaalcvlglglvllsdaggdgggsrpllgdVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLNPMPDLENRISDLQYQILDNENVASTNEPSDS
Disordered region (IsUnstruct)
***NAPINSWWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEK**************LQYQI***************
Disordered Region (DISOPRED)
********SWWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYS**************************************
Disordered Region (DISEMBL)
MNWNAPINSWWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLNPMPDLENRISDLQYQILDNENV*********
Disordered Region (DISPRO)
MNWNAPINSWWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTT************************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MNWNAPINSWWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLNPMPDLENRISDLQYQILDNENVASTNEPSDS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	341	2.2.26 [Sep-21-2011]
Q5T1Q4	408	Solute carrier family 35	yes	no	0.920	0.769	0.363	1e-51
Q8BGK5	408	Solute carrier family 35	yes	no	0.920	0.769	0.369	2e-51
Q7TML3	375	Solute carrier family 35	no	no	0.888	0.808	0.357	8e-48
Q8IXU6	374	Solute carrier family 35	no	no	0.906	0.826	0.349	2e-47
Q0V9U2	391	Solute carrier family 35	no	no	0.870	0.759	0.334	1e-43
O59785	505	Uncharacterized solute ca	yes	no	0.844	0.570	0.313	9e-37

>sp|Q5T1Q4|S35F1_HUMAN Solute carrier family 35 member F1 OS=Homo sapiens GN=SLC35F1 PE=2 SV=2

 Score =  204 bits (518), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 118/325 (36%), Positives = 184/325 (56%), Gaps = 11/325 (3%)

Query: 25  LGQLVSFTLALMSFTSSLIA-DLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR------L 77
           LGQ++S  +  +  TS  ++ D   + PV QS   Y  L LVY   L  R+        L
Sbjct: 66  LGQVLSLLICGIGLTSKYLSEDFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLAIL 125

Query: 78  RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQ 137
           R  W+ Y++LG +D++ N+LV KAYQ++++TS+ LLDC  I   I+L+W FL  RY    
Sbjct: 126 RRRWWKYMILGLIDLEANYLVVKAYQYTTLTSIQLLDCFVIPVVILLSWFFLLIRYKAVH 185

Query: 138 LLGAALCVLGLGLVLLSD---AGGDGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKD 194
            +G  +C+LG+G ++ +D       G G   L+GD+LV+ G   +  SNV EE+ ++   
Sbjct: 186 FIGIVVCILGMGCMVGADVLVGRHQGAGENKLVGDLLVLGGATLYGISNVWEEYIIRTLS 245

Query: 195 RVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLK 254
           RVE + MIG++G   S +QL+I+E K L  V W   I L + G++A  F  Y+  P V+K
Sbjct: 246 RVEFLGMIGLFGAFFSGIQLAIMEHKELLKVPWDWQIGLLYVGFSACMFGLYSFMPVVIK 305

Query: 255 LSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLNPMPD 314
            + AT  NLSLLTAD++++   +  +H K   LY L+F  ++IGL++YS+T   +   P 
Sbjct: 306 KTSATSVNLSLLTADLYSLFCGLFLFHYKFSGLYLLSFFTILIGLVLYSSTSTYIAQDPR 365

Query: 315 LENRISDLQYQILDNENVASTNEPS 339
           +  +  +    ++D    A   EPS
Sbjct: 366 VYKQFRNPSGPVVDLPTTAQV-EPS 389

Putative solute transporter.
Homo sapiens (taxid: 9606)

>sp|Q8BGK5|S35F1_MOUSE Solute carrier family 35 member F1 OS=Mus musculus GN=Slc35f1 PE=2 SV=1

 Score =  203 bits (516), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/325 (36%), Positives = 184/325 (56%), Gaps = 11/325 (3%)

Query: 25  LGQLVSFTLALMSFTSSLIA-DLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR------L 77
           LGQ++S  +  +  TS  +A D   + PV QS   Y  L LVY   L  R+        L
Sbjct: 66  LGQVLSLLVCGIGLTSKYLAEDFHANTPVFQSFLNYILLFLVYTTTLAVRQGEENLLAIL 125

Query: 78  RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQ 137
           R  W+ Y++LG +D++ N+LV KAYQ++++TSV LLDC  I   I+L+W FL  RY    
Sbjct: 126 RRRWWKYMILGLIDLEANYLVVKAYQYTTLTSVQLLDCFVIPVVILLSWFFLLIRYKAVH 185

Query: 138 LLGAALCVLGLGLVLLSD---AGGDGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKD 194
            +G  +C+LG+G ++ +D       G G   L+GD+LV+ G   +  SNV EE  ++   
Sbjct: 186 FIGIVVCILGMGCMVGADVLVGRHQGAGENKLVGDLLVLGGATLYGISNVWEESIIRTLS 245

Query: 195 RVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLK 254
           RVE + MIG++G   S +QL+I+E K L  V W   I L + G++A  F  Y+  P V+K
Sbjct: 246 RVEFLGMIGLFGAFFSGIQLAIMEHKELLKVPWDWQIGLLYVGFSACMFGLYSFMPVVIK 305

Query: 255 LSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLNPMPD 314
            + AT  NLSLLTAD++++   +  +H K   LY L+F  ++IGL++YS+T   +   P 
Sbjct: 306 KTSATSVNLSLLTADLYSLFCGLFLFHYKFSGLYLLSFFTILIGLVLYSSTSTYIAQDPR 365

Query: 315 LENRISDLQYQILDNENVASTNEPS 339
           +  +  +    ++D  + A   EPS
Sbjct: 366 VYKQFRNPSGPVVDLPSTAQV-EPS 389

Putative solute transporter.

Mus musculus (taxid: 10090)

>sp|Q7TML3|S35F2_MOUSE Solute carrier family 35 member F2 OS=Mus musculus GN=Slc35f2 PE=2 SV=2

 Score =  191 bits (484), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 112/313 (35%), Positives = 180/313 (57%), Gaps = 10/313 (3%)

Query: 12  RSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIAD-LGVDAPVTQSAFAYFSLALVYGGVL 70
           R   T   L  + LGQ++S  +   + TS  +A+   V+ P+ QS   Y  L LVY  +L
Sbjct: 32  RKLFTWDILKTIALGQMLSLCICGTAITSQYLAEKYRVNTPMLQSFINYCLLFLVYTLML 91

Query: 71  LYRR------QRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVL 124
            ++       + LR  W+ Y LLG  DV+ N+L+ +AYQ++++TSV LLDC  I   + L
Sbjct: 92  AFQSGSDNLLEILRRKWWKYTLLGLADVEANYLIVRAYQYTTLTSVQLLDCFGIPVLMAL 151

Query: 125 TWLFLGTRYSLWQLLGAALCVLGLGLVLLSD--AG-GDGGGSRPLLGDVLVIAGTIFFAT 181
           +W  L  RY +   +   +C+LG+G ++ +D  AG  D  GS  L+GD+LV+ G   +A 
Sbjct: 152 SWFILRARYKVIHFIAVFVCLLGVGTMVGADILAGREDNSGSDVLIGDILVLLGASLYAV 211

Query: 182 SNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAAS 241
           SNV EE+ VKK  R E + M+G++G ++S +QL I+E K +  ++W   I L F  +A  
Sbjct: 212 SNVCEEYIVKKLSRQEFLGMVGLFGTIISGIQLLIVEYKDIARIQWDWKIALLFVAFALC 271

Query: 242 SFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLII 301
            F  Y+  P V+K++ AT  NL +LTAD++++ F +  +  K   LY L+F ++++G I+
Sbjct: 272 MFCLYSFMPLVIKVTSATSVNLGILTADLYSLFFGLFLFEYKFSGLYILSFTVIMVGFIL 331

Query: 302 YSTTEKDLNPMPD 314
           Y +T       P+
Sbjct: 332 YCSTPTRTVEPPE 344

Putative solute transporter.

Mus musculus (taxid: 10090)

>sp|Q8IXU6|S35F2_HUMAN Solute carrier family 35 member F2 OS=Homo sapiens GN=SLC35F2 PE=1 SV=1

 Score =  189 bits (481), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/329 (34%), Positives = 188/329 (57%), Gaps = 20/329 (6%)

Query: 25  LGQLVSFTLALMSFTSSLIAD-LGVDAPVTQSAFAYFSLALVYGGVLLYRRQR------L 77
           LGQ++S  +   + TS  +A+   V+ P+ QS   Y  L L+Y  +L +R         L
Sbjct: 45  LGQMLSLCICGTAITSQYLAERYKVNTPMLQSFINYCLLFLIYTVMLAFRSGSDNLLVIL 104

Query: 78  RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQ 137
           +  W+ Y+LLG  DV+ N+++ +AYQ++++TSV LLDC  I   + L+W  L  RY +  
Sbjct: 105 KRKWWKYILLGLADVEANYVIVRAYQYTTLTSVQLLDCFGIPVLMALSWFILHARYRVIH 164

Query: 138 LLGAALCVLGLGLVLLSD--AG-GDGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKD 194
            +  A+C+LG+G ++ +D  AG  D  GS  L+GD+LV+ G   +A SNV EE+ VKK  
Sbjct: 165 FIAVAVCLLGVGTMVGADILAGREDNSGSDVLIGDILVLLGASLYAISNVCEEYIVKKLS 224

Query: 195 RVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLK 254
           R E + M+G++G ++S +QL I+E K + S+ W   I L F  +A   F  Y+  P V+K
Sbjct: 225 RQEFLGMVGLFGTIISGIQLLIVEYKDIASIHWDWKIALLFVAFALCMFCLYSFMPLVIK 284

Query: 255 LSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIY-STTEKDLNPMP 313
           ++ AT  NL +LTAD++++   +  +  K   LY L+F ++++G I+Y ST  +   P  
Sbjct: 285 VTSATSVNLGILTADLYSLFVGLFLFGYKFSGLYILSFTVIMVGFILYCSTPTRTAEPA- 343

Query: 314 DLENRISDLQYQILDN------ENVASTN 336
             E+ +  +    +DN      EN+  T+
Sbjct: 344 --ESSVPPVTSIGIDNLGLKLEENLQETH 370

Putative solute transporter.

Homo sapiens (taxid: 9606)

>sp|Q0V9U2|S35F2_XENTR Solute carrier family 35 member F2 OS=Xenopus tropicalis GN=slc35f2 PE=2 SV=2

 Score =  177 bits (449), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 169/311 (54%), Gaps = 14/311 (4%)

Query: 25  LGQLVSFTLALMSFTSSLIA-DLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR------L 77
           LGQ++S  +  +  TS  ++ D   + P+ QS   Y  L LVY   L  R+        L
Sbjct: 45  LGQVLSLLICGIRLTSKYLSEDFHANTPLFQSFLNYILLFLVYTTTLAVRQGEENLLAIL 104

Query: 78  RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQ 137
           +  W+ Y+ LG +D++  +LV KA+Q+++  S+ LL+C  I   I+L+W FL  RY +  
Sbjct: 105 KRRWWKYMFLGIIDIEATYLVVKAHQYTTFISIQLLNCFVIPVVILLSWFFLLVRYKVLH 164

Query: 138 LLGAALCVLGLGLVLLSD-------AGGDGGGSRPLLGDVLVIAGTIFFATSNVGEEFFV 190
            +GA  C+LG+G +  +D        G    G   L+GDVLV+ G   +  S+V +E+ V
Sbjct: 165 FIGAIACILGIGCMAGADVLMGRQQKGDFYPGDSKLIGDVLVLGGATLYGISSVCQEYIV 224

Query: 191 KKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAP 250
           +   RVE++ MIG++G   S +QL+I+E K L  V W   I L + G+ A  F  Y+  P
Sbjct: 225 RNLSRVELLGMIGLFGSFFSGIQLAIMEHKELLKVPWDWQIGLLYVGFTACMFGLYSFMP 284

Query: 251 FVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLN 310
            V+K + AT  NLS+LTA+++     +  +H K   LY L+F  +++GL+ Y +T   + 
Sbjct: 285 VVIKKTSATAINLSMLTAELYTFFCGLFLFHYKFSGLYLLSFFTILLGLVFYFSTNTYVA 344

Query: 311 PMPDLENRISD 321
             P +  +  +
Sbjct: 345 QDPRVYKQFRN 355

Putative solute transporter.

Xenopus tropicalis (taxid: 8364)

>sp|O59785|YCN8_SCHPO Uncharacterized solute carrier family 35 member C320.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC320.08 PE=1 SV=1

 Score =  154 bits (389), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 163/303 (53%), Gaps = 15/303 (4%)

Query: 22  LLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYR-------R 74
           + FLGQ++S  +   +  +  ++ +  + P  Q+   Y  L LVY    ++R        
Sbjct: 144 VFFLGQVLSLCITATNTFNGYMSGIS-NIPAFQTFLVYALLTLVYTPYTVFRMGFKKYFE 202

Query: 75  QRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYS 134
              R  W  Y++  F DV+GN+ V  AYQ++++ S +LLD       ++L+++FL  RY 
Sbjct: 203 MIFRHGWK-YIIFAFFDVEGNYFVVLAYQYTNMLSASLLDSWATVAVVILSFIFLKVRYH 261

Query: 135 LWQLLGAALCVLGLGLVLLSD--AGGDGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKK 192
             Q+LG   C+ GL L+++SD  + GD     P LGD  +I G   +  SN  EE+F  K
Sbjct: 262 WSQILGVVACIGGLVLLVVSDVISRGDYSAVNPGLGDGYMIIGATCYGVSNTLEEYFASK 321

Query: 193 KDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFV 252
                V+  + +YG ++S +Q  I +   L ++ W++ +    AG+    F+ Y+LAP +
Sbjct: 322 LPLYVVIGQLSLYGSIISIIQTFIFDRHHLYTLHWTSEMGGYLAGFILVMFLLYSLAPIL 381

Query: 253 LKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIY----STTEKD 308
            ++S AT +N+SLLT+D W++V  I  +   V WLY +AF ++++GL +Y      T + 
Sbjct: 382 FRMSSATFYNISLLTSDFWSLVIGIHVFGYHVYWLYPIAFVLIILGLFVYHVFVDATRES 441

Query: 309 LNP 311
           + P
Sbjct: 442 IKP 444

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	341
297740093	337	unnamed protein product [Vitis vinifera]	0.982	0.994	0.727	1e-140
359481996	352	PREDICTED: solute carrier family 35 memb	0.985	0.954	0.721	1e-139
297740094	337	unnamed protein product [Vitis vinifera]	0.967	0.979	0.692	1e-128
359481998	673	PREDICTED: solute carrier family 35 memb	0.991	0.502	0.679	1e-128
255575633	340	conserved hypothetical protein [Ricinus	0.967	0.970	0.731	1e-123
357511003	363	Solute carrier family 35 member F1 [Medi	0.997	0.936	0.667	1e-116
357511005	349	Solute carrier family 35 member F2 [Medi	0.997	0.974	0.648	1e-113
224134462	267	predicted protein [Populus trichocarpa]	0.759	0.970	0.785	1e-107
242088093	347	hypothetical protein SORBIDRAFT_09g02187	0.914	0.899	0.599	6e-98
115464161	354	Os05g0444300 [Oryza sativa Japonica Grou	0.914	0.881	0.585	7e-98

>gi|297740093|emb|CBI30275.3| unnamed protein product [Vitis vinifera]

 Score =  502 bits (1293), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 245/337 (72%), Positives = 290/337 (86%), Gaps = 2/337 (0%)

Query: 7   INSWWRSH-VTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALV 65
           ++SWWRSH + LRTLY+LFLGQ+VSF LA+ SF+SS IADLGVDAP+TQS F Y SLALV
Sbjct: 1   MSSWWRSHGILLRTLYVLFLGQVVSFVLAVASFSSSFIADLGVDAPLTQSFFTYLSLALV 60

Query: 66  YGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLT 125
           YG +LLYRRQ+LR++WYWYL LGFVDVQGN+LVNKAYQ+SSITSVTLLDC TI W I+LT
Sbjct: 61  YGSILLYRRQKLRISWYWYLFLGFVDVQGNYLVNKAYQYSSITSVTLLDCWTIPWVIILT 120

Query: 126 WLFLGTRYSLWQLLGAALCVLGLGLVLLSDAG-GDGGGSRPLLGDVLVIAGTIFFATSNV 184
           W+FLGTRYSLWQ  GAALC++GLGLVLLSDAG G G GSRPLLGD+LVIAGT+FFA SNV
Sbjct: 121 WIFLGTRYSLWQFFGAALCIVGLGLVLLSDAGVGGGDGSRPLLGDILVIAGTLFFALSNV 180

Query: 185 GEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFM 244
           GEEF VKKKDRVEVV MIG++GLLVS  ++SI+ELKSLESVEWST+I+LGF GYA S+F+
Sbjct: 181 GEEFCVKKKDRVEVVTMIGIFGLLVSVCEISIMELKSLESVEWSTDIILGFVGYAVSTFL 240

Query: 245 FYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYST 304
           FYT+ PF+L++SGAT FNLSLLT+DMWAVV RI FYHQKVDWLY+++F +V +GL+IYS 
Sbjct: 241 FYTIVPFLLQISGATWFNLSLLTSDMWAVVIRIFFYHQKVDWLYYISFAMVAVGLVIYSK 300

Query: 305 TEKDLNPMPDLENRISDLQYQILDNENVASTNEPSDS 341
           TEKD  P+P L +   + +YQ+LD EN  S NE   S
Sbjct: 301 TEKDPIPLPTLGDGNHNAEYQVLDEENTESRNETPAS 337

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359481996|ref|XP_002276979.2| PREDICTED: solute carrier family 35 member F1-like [Vitis vinifera]

 Score =  500 bits (1288), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 244/338 (72%), Positives = 290/338 (85%), Gaps = 2/338 (0%)

Query: 5   APINSWWRSH-VTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLA 63
           A +++WWRSH + LRTLY+LFLGQ+VSF LA+ SF+SS IADLGVDAP+TQS F Y SLA
Sbjct: 16  ADLDAWWRSHGILLRTLYVLFLGQVVSFVLAVASFSSSFIADLGVDAPLTQSFFTYLSLA 75

Query: 64  LVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIV 123
           LVYG +LLYRRQ+LR++WYWYL LGFVDVQGN+LVNKAYQ+SSITSVTLLDC TI W I+
Sbjct: 76  LVYGSILLYRRQKLRISWYWYLFLGFVDVQGNYLVNKAYQYSSITSVTLLDCWTIPWVII 135

Query: 124 LTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSRPLLGDVLVIAGTIFFATSN 183
           LTW+FLGTRYSLWQ  GAALC++GLGLVLLSDAG  G GSRPLLGD+LVIAGT+FFA SN
Sbjct: 136 LTWIFLGTRYSLWQFFGAALCIVGLGLVLLSDAGV-GDGSRPLLGDILVIAGTLFFALSN 194

Query: 184 VGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSF 243
           VGEEF VKKKDRVEVV MIG++GLLVS  ++SI+ELKSLESVEWST+I+LGF GYA S+F
Sbjct: 195 VGEEFCVKKKDRVEVVTMIGIFGLLVSVCEISIMELKSLESVEWSTDIILGFVGYAVSTF 254

Query: 244 MFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYS 303
           +FYT+ PF+L++SGAT FNLSLLT+DMWAVV RI FYHQKVDWLY+++F +V +GL+IYS
Sbjct: 255 LFYTIVPFLLQISGATWFNLSLLTSDMWAVVIRIFFYHQKVDWLYYISFAMVAVGLVIYS 314

Query: 304 TTEKDLNPMPDLENRISDLQYQILDNENVASTNEPSDS 341
            TEKD  P+P L +   + +YQ+LD EN  S NE   S
Sbjct: 315 KTEKDPIPLPTLGDGNHNAEYQVLDEENTESRNETPAS 352

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740094|emb|CBI30276.3| unnamed protein product [Vitis vinifera]

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 230/332 (69%), Positives = 274/332 (82%), Gaps = 2/332 (0%)

Query: 7   INSWWR-SHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALV 65
           +NSWWR +  +LRTL++L LGQ+VSF LA+  FTSS IADLGVDAP+TQS F Y  LALV
Sbjct: 1   MNSWWRCNEASLRTLHVLLLGQVVSFVLAVSGFTSSFIADLGVDAPLTQSFFTYLCLALV 60

Query: 66  YGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLT 125
            G +LLYRRQRL+V+WYWYL LGF+DVQGN+LVNKA+Q+SS+TSV LLDC TI W I+LT
Sbjct: 61  NGSILLYRRQRLQVSWYWYLFLGFIDVQGNYLVNKAFQYSSLTSVALLDCWTIPWVIILT 120

Query: 126 WLFLGTRYSLWQLLGAALCVLGLGLVLLSDAG-GDGGGSRPLLGDVLVIAGTIFFATSNV 184
           W+FLGTRYS+WQ  GAALCV GLGLVLLSDAG G  GGSRPLLGD LVIAGT+  A SNV
Sbjct: 121 WIFLGTRYSIWQFFGAALCVAGLGLVLLSDAGVGGEGGSRPLLGDTLVIAGTLCIAMSNV 180

Query: 185 GEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFM 244
           GEEF VKKKDRVE++ M+G++GLLVS  ++SI+ELKSLES+EWST I+L F G+A S+F+
Sbjct: 181 GEEFCVKKKDRVELMSMLGLFGLLVSVCEISIVELKSLESIEWSTKIVLAFVGFALSNFL 240

Query: 245 FYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYST 304
           FYTL PF+LK+SGATMFNLS LT+DMWAVV RI FY QKVDWLY+L+F +V IG+IIYST
Sbjct: 241 FYTLVPFLLKISGATMFNLSALTSDMWAVVIRIFFYRQKVDWLYYLSFAVVAIGIIIYST 300

Query: 305 TEKDLNPMPDLENRISDLQYQILDNENVASTN 336
           TEKD  P P  E+     QYQ+L+ E+  S N
Sbjct: 301 TEKDPIPSPSPEDGNLSAQYQVLNGESTESRN 332

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359481998|ref|XP_003632702.1| PREDICTED: solute carrier family 35 member F1-like [Vitis vinifera]

 Score =  462 bits (1190), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 231/340 (67%), Positives = 275/340 (80%), Gaps = 2/340 (0%)

Query: 4   NAPINSWWR-SHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSL 62
              +NSWWR +  +LRTL++L LGQ+VSF LA+  FTSS IADLGVDAP+TQS F Y  L
Sbjct: 334 ECAMNSWWRCNEASLRTLHVLLLGQVVSFVLAVSGFTSSFIADLGVDAPLTQSFFTYLCL 393

Query: 63  ALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAI 122
           ALV G +LLYRRQRL+V+WYWYL LGF+DVQGN+LVNKA+Q+SS+TSV LLDC TI W I
Sbjct: 394 ALVNGSILLYRRQRLQVSWYWYLFLGFIDVQGNYLVNKAFQYSSLTSVALLDCWTIPWVI 453

Query: 123 VLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAG-GDGGGSRPLLGDVLVIAGTIFFAT 181
           +LTW+FLGTRYS+WQ  GAALCV GLGLVLLSDAG G  GGSRPLLGD LVIAGT+  A 
Sbjct: 454 ILTWIFLGTRYSIWQFFGAALCVAGLGLVLLSDAGVGGEGGSRPLLGDTLVIAGTLCIAM 513

Query: 182 SNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAAS 241
           SNVGEEF VKKKDRVE++ M+G++GLLVS  ++SI+ELKSLES+EWST I+L F G+A S
Sbjct: 514 SNVGEEFCVKKKDRVELMSMLGLFGLLVSVCEISIVELKSLESIEWSTKIVLAFVGFALS 573

Query: 242 SFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLII 301
           +F+FYTL PF+LK+SGATMFNLS LT+DMWAVV RI FY QKVDWLY+L+F +V IG+II
Sbjct: 574 NFLFYTLVPFLLKISGATMFNLSALTSDMWAVVIRIFFYRQKVDWLYYLSFAVVAIGIII 633

Query: 302 YSTTEKDLNPMPDLENRISDLQYQILDNENVASTNEPSDS 341
           YSTTEKD  P P  E+     QYQ+L+ E+  S N    S
Sbjct: 634 YSTTEKDPIPSPSPEDGNLSAQYQVLNGESTESRNAIPGS 673

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575633|ref|XP_002528716.1| conserved hypothetical protein [Ricinus communis] gi|223531810|gb|EEF33628.1| conserved hypothetical protein [Ricinus communis]

 Score =  446 bits (1146), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 245/335 (73%), Positives = 289/335 (86%), Gaps = 5/335 (1%)

Query: 1   MNWNAPINS--WWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFA 58
           MNW    NS  WW+SH TL+ LYLL LGQ+VSF LA+ S TSSL+ DLG+DAP+TQS+F 
Sbjct: 1   MNWYGN-NSCRWWKSHATLKILYLLLLGQVVSFILAVCSLTSSLVVDLGIDAPITQSSFN 59

Query: 59  YFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTI 118
           YF+LALV+G +LLYRRQ+LRV+WYWYLLLGFVDVQGN+LVN+AYQ++SITSVTLLDC TI
Sbjct: 60  YFALALVFGSILLYRRQKLRVSWYWYLLLGFVDVQGNYLVNRAYQYTSITSVTLLDCWTI 119

Query: 119 AWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDA-GGDGGGSRPLLGDVLVIAGTI 177
            WAIVLTW FLGTRYS+WQL GAALCVLGLGLVLLSDA  G GGGSRPLLGD+LVIAGTI
Sbjct: 120 VWAIVLTWFFLGTRYSIWQLFGAALCVLGLGLVLLSDAGVGGGGGSRPLLGDLLVIAGTI 179

Query: 178 FFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAG 237
           FFA SNVGEEFFVK KDRVEVV M+G++GLLVS VQLS+LELK+L+S+ W+ +I+L  AG
Sbjct: 180 FFALSNVGEEFFVKNKDRVEVVAMLGIFGLLVSVVQLSVLELKTLKSINWTADIILAIAG 239

Query: 238 YAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVI 297
           Y  S FMFYTL PFVLKL GATMFNLS+LT+DMWAVVFRICFYHQ+VDWLYFL+  +V +
Sbjct: 240 YTLSMFMFYTLTPFVLKLGGATMFNLSMLTSDMWAVVFRICFYHQEVDWLYFLSLAVVTV 299

Query: 298 GLIIYSTTEKDLN-PMPDLENRISDLQYQILDNEN 331
           GLIIYSTT+K+ + P+P LE   S+ +YQ+L++ N
Sbjct: 300 GLIIYSTTDKESSAPIPALEEGNSNGEYQVLNDGN 334

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357511003|ref|XP_003625790.1| Solute carrier family 35 member F1 [Medicago truncatula] gi|355500805|gb|AES82008.1| Solute carrier family 35 member F1 [Medicago truncatula]

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 231/346 (66%), Positives = 278/346 (80%), Gaps = 6/346 (1%)

Query: 1   MNWNAPINSWWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYF 60
           M+W   I++WW    TL+ L +L LGQLVSF LALMS TSSLIA  GVDAP+TQS F Y 
Sbjct: 1   MDWTT-ISTWWSRTATLQILGILLLGQLVSFLLALMSITSSLIAQFGVDAPLTQSLFTYG 59

Query: 61  SLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAW 120
           SLALVYG +LLYR Q+  V+WYWYLLLGF D QG +LV KAYQ++S+TSVTLLDC T+ W
Sbjct: 60  SLALVYGSILLYRHQKPLVSWYWYLLLGFADAQGCYLVIKAYQYTSVTSVTLLDCWTVPW 119

Query: 121 AIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDA----GGDGGGSRPLLGDVLVIAGT 176
           AI+LTW+FLGTRYSLWQL G  LCVLGL LVL SD     GG GGGS+P+LGDVLVI GT
Sbjct: 120 AILLTWIFLGTRYSLWQLCGGTLCVLGLSLVLFSDTWDGGGGGGGGSKPVLGDVLVIVGT 179

Query: 177 IFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFA 236
           +F+A SNV EEF VKKKDRVE V M+GVYG LV+A+++S+LELK+L+S++WS++I+L FA
Sbjct: 180 VFYAISNVVEEFCVKKKDRVETVTMLGVYGFLVTAIEVSVLELKTLKSIKWSSDIVLAFA 239

Query: 237 GYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVV 296
           GY  SSFMFY+LAPFVLKLSG+TMFNLSLLT+D+WAVVFR+  YHQKVDWLYF++F +V 
Sbjct: 240 GYGVSSFMFYSLAPFVLKLSGSTMFNLSLLTSDIWAVVFRVFIYHQKVDWLYFVSFLVVA 299

Query: 297 IGLIIYSTTEKDLNPM-PDLENRISDLQYQILDNENVASTNEPSDS 341
           IGLIIYSTTEK L P     E+   + +YQIL+ EN +ST   +DS
Sbjct: 300 IGLIIYSTTEKKLVPASATTEDENLNTEYQILNGENESSTFAQNDS 345

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357511005|ref|XP_003625791.1| Solute carrier family 35 member F2 [Medicago truncatula] gi|355500806|gb|AES82009.1| Solute carrier family 35 member F2 [Medicago truncatula]

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 225/347 (64%), Positives = 274/347 (78%), Gaps = 7/347 (2%)

Query: 1   MNWNAPINSWWRSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYF 60
           M+W   I++WW    TL+ L +L LGQLVSF LALMS TSSLIA  GVDAP+TQS F Y 
Sbjct: 1   MDWTT-ISTWWSRTATLQILGILLLGQLVSFLLALMSITSSLIAQFGVDAPLTQSLFTYG 59

Query: 61  SLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAW 120
           SLALVYG +LLYR Q+  V+WYWYLLLGF D QG +LV KAYQ++S+TSVTLLDC T+ W
Sbjct: 60  SLALVYGSILLYRHQKPLVSWYWYLLLGFADAQGCYLVIKAYQYTSVTSVTLLDCWTVPW 119

Query: 121 AIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDA-----GGDGGGSRPLLGDVLVIAG 175
           AI+LTW+FLGTRYSLWQL G  LCVLGL LVL SD      GG GGGS+P+LGDVLVI G
Sbjct: 120 AILLTWIFLGTRYSLWQLCGGTLCVLGLSLVLFSDTWDGGGGGGGGGSKPILGDVLVIVG 179

Query: 176 TIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGF 235
           T+FFA SNV EEF VKKKDRVE V M+GVYG LV+A+++S+LELK+L+S++WS +I+L F
Sbjct: 180 TVFFAVSNVVEEFCVKKKDRVEAVTMLGVYGFLVTAIEVSVLELKTLKSIKWSGDIVLAF 239

Query: 236 AGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIV 295
           AGY  SSF++ +LAPFVLK  G+ MFNLSLLT+DMWAV+FR+  YHQKVDWLYF++F +V
Sbjct: 240 AGYGVSSFIYCSLAPFVLKFGGSAMFNLSLLTSDMWAVLFRVFIYHQKVDWLYFVSFLVV 299

Query: 296 VIGLIIYSTTEKDLNPM-PDLENRISDLQYQILDNENVASTNEPSDS 341
            IGLIIYSTTEK L P     E+   + +YQIL+ E+ ++T + SDS
Sbjct: 300 GIGLIIYSTTEKKLVPASATTEDENLNTEYQILNGESESTTLDQSDS 346

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134462|ref|XP_002327411.1| predicted protein [Populus trichocarpa] gi|222835965|gb|EEE74386.1| predicted protein [Populus trichocarpa]

 Score =  393 bits (1009), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 205/261 (78%), Positives = 230/261 (88%), Gaps = 2/261 (0%)

Query: 47  GVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSS 106
           GVDAP+TQS+F Y +LAL+YG +LLYRRQ+L+V+WYWYLLLGFVDVQGN+LVNKAYQFSS
Sbjct: 1   GVDAPLTQSSFNYLALALIYGSILLYRRQKLQVSWYWYLLLGFVDVQGNYLVNKAYQFSS 60

Query: 107 ITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAG--GDGGGSR 164
           ITSVTLLDC T+AW I LTW FLGTRY+LWQLLGAA+CVLGLGLVLLSDAG     GGS+
Sbjct: 61  ITSVTLLDCWTVAWVIALTWFFLGTRYTLWQLLGAAVCVLGLGLVLLSDAGVAHITGGSK 120

Query: 165 PLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLES 224
           P+LGD LVI GTIFFA SNVGEEF VKKK RVEVV MIGVYG LVSAV+LSI+ELKSLE+
Sbjct: 121 PVLGDFLVITGTIFFALSNVGEEFCVKKKGRVEVVTMIGVYGFLVSAVELSIVELKSLEA 180

Query: 225 VEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKV 284
           V WS +I+   AGY  S F+FY+LAPFVLKLSGATMFNLS+LTADMWAVVFR+ FYHQ+V
Sbjct: 181 VAWSKDIVFAIAGYTLSMFLFYSLAPFVLKLSGATMFNLSILTADMWAVVFRVFFYHQQV 240

Query: 285 DWLYFLAFGIVVIGLIIYSTT 305
           DWLYFL+F IV IGLIIYS T
Sbjct: 241 DWLYFLSFAIVAIGLIIYSLT 261

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242088093|ref|XP_002439879.1| hypothetical protein SORBIDRAFT_09g021870 [Sorghum bicolor] gi|241945164|gb|EES18309.1| hypothetical protein SORBIDRAFT_09g021870 [Sorghum bicolor]

 Score =  363 bits (932), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 190/317 (59%), Positives = 229/317 (72%), Gaps = 5/317 (1%)

Query: 30  SFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGF 89
           +F +A  SFTSSLIA+LGVDAP+TQS FAY  L LVY  ++L RRQ+L++AWYWYL L F
Sbjct: 21  AFAMAASSFTSSLIANLGVDAPLTQSFFAYLLLTLVYVPIVLRRRQKLQIAWYWYLALAF 80

Query: 90  VDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLG 149
            DVQGN+LV KAYQ+S ITSVTLLDC T+ W I+LTW  LGTRYSLWQ +GA  CV GL 
Sbjct: 81  FDVQGNYLVVKAYQYSYITSVTLLDCWTVVWVIILTWYALGTRYSLWQFVGAGTCVAGLA 140

Query: 150 LVLLSDAGG---DGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYG 206
           LVLLSDA        G  PLLGDVLVIAGT+ FA SNVGEE+ VKKKDRVEVV M+G++G
Sbjct: 141 LVLLSDAESPEEQDPGKMPLLGDVLVIAGTVGFAFSNVGEEYCVKKKDRVEVVAMLGLFG 200

Query: 207 LLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLL 266
           LL+S VQ+ I E K LE+V WS  ++  FAG+A + F+FYT+ PFVLK+SGAT+FNLSLL
Sbjct: 201 LLISIVQILIFERKGLEAVTWSPTMISLFAGFAVAIFIFYTITPFVLKMSGATLFNLSLL 260

Query: 267 TADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYS--TTEKDLNPMPDLENRISDLQY 324
           T+DMWAV  R+ FY Q+++WLY+LAF +V IGLIIYS   +  D       E      Q 
Sbjct: 261 TSDMWAVAIRVLFYQQQINWLYYLAFTVVAIGLIIYSLNDSSSDDETAGSTEAPAQYQQL 320

Query: 325 QILDNENVASTNEPSDS 341
            I DN     +N  S  
Sbjct: 321 PIEDNSTRIGSNSGSQE 337

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115464161|ref|NP_001055680.1| Os05g0444300 [Oryza sativa Japonica Group] gi|50080280|gb|AAT69615.1| unknown protein [Oryza sativa Japonica Group] gi|113579231|dbj|BAF17594.1| Os05g0444300 [Oryza sativa Japonica Group] gi|215694600|dbj|BAG89791.1| unnamed protein product [Oryza sativa Japonica Group] gi|222631760|gb|EEE63892.1| hypothetical protein OsJ_18717 [Oryza sativa Japonica Group]

 Score =  363 bits (931), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 185/316 (58%), Positives = 232/316 (73%), Gaps = 4/316 (1%)

Query: 30  SFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGF 89
           +F++A+ SFTSSLIA LGVDAP+TQS FAY  L LVY  +LL RRQ+L++ WYWYL L F
Sbjct: 27  AFSMAVSSFTSSLIATLGVDAPLTQSFFAYLLLTLVYVPILLKRRQKLQIPWYWYLALAF 86

Query: 90  VDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLG 149
           +DVQGN+LV KAYQ+S ITSVTLLDC T+ W ++LTW  LGTRYS WQ++GA  CV GL 
Sbjct: 87  IDVQGNYLVVKAYQYSYITSVTLLDCWTVVWVVILTWYALGTRYSFWQIVGAGTCVAGLA 146

Query: 150 LVLLSD---AGGDGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYG 206
           LVLLSD   A        PLLGD LVIAGTIFFA SNVGEE+ VKKKDRVE V M  ++G
Sbjct: 147 LVLLSDSKSADAQDPSKIPLLGDALVIAGTIFFAFSNVGEEYCVKKKDRVEFVAMFALFG 206

Query: 207 LLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLL 266
           LLVS +Q+ I E K+L ++ WS  +L  FAG+A + FMFY++ PFVLK+SG+T+FNLSLL
Sbjct: 207 LLVSIIQILIFEKKNLVAIAWSPTMLCLFAGFAVALFMFYSITPFVLKMSGSTLFNLSLL 266

Query: 267 TADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLNP-MPDLENRISDLQYQ 325
           T+DMWAV  R+ FYHQ+++WLY++AF +V IGLIIYS  +   +       N  +  QYQ
Sbjct: 267 TSDMWAVAIRVLFYHQQINWLYYIAFAVVAIGLIIYSLNDHSSDSGTRTTANTEAAAQYQ 326

Query: 326 ILDNENVASTNEPSDS 341
            L  EN ++    +DS
Sbjct: 327 QLPGENNSTGIGSNDS 342

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	341
TAIR|locus:2081262	333	AT3G59340 "AT3G59340" [Arabido	0.478	0.489	0.455	5.4e-67
TAIR|locus:2081212	339	AT3G59320 "AT3G59320" [Arabido	0.404	0.407	0.514	1.4e-66
TAIR|locus:2081197	363	AT3G59310 "AT3G59310" [Arabido	0.351	0.330	0.508	9.9e-52
WB|WBGene00022270	429	Y73E7A.3 [Caenorhabditis elega	0.401	0.319	0.401	1.4e-45
UNIPROTKB|Q5T1Q4	408	SLC35F1 "Solute carrier family	0.495	0.414	0.358	5.3e-45
MGI|MGI:2139810	408	Slc35f1 "solute carrier family	0.495	0.414	0.358	6.7e-45
DICTYBASE|DDB_G0287003	417	DDB_G0287003 "solute carrier f	0.929	0.760	0.326	4e-42
MGI|MGI:1919272	375	Slc35f2 "solute carrier family	0.879	0.8	0.321	7.5e-41
UNIPROTKB|Q8IXU6	374	SLC35F2 "Solute carrier family	0.850	0.775	0.316	6.8e-40
ASPGD|ASPL0000029133	399	AN5236 [Emericella nidulans (t	0.410	0.350	0.328	1e-35

TAIR|locus:2081262 AT3G59340 "AT3G59340" [Arabidopsis thaliana (taxid:3702)]

 Score = 388 (141.6 bits), Expect = 5.4e-67, Sum P(2) = 5.4e-67
 Identities = 77/169 (45%), Positives = 112/169 (66%)

Query:   171 LVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTN 230
             LV+AG   +A SN  EEF VK  D VE++  +G++G ++SA+Q++I E   L+++ WS +
Sbjct:   170 LVLAGATLYAVSNTTEEFLVKNADTVELMTFMGLFGAIISAIQVAIFEQGELKAIHWSAD 229

Query:   231 ILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFL 290
              +  F  +A + F+FY+L P +L+ +G+TMF LSLLT+DMWAV+ RI  YH+KVDWLY+L
Sbjct:   230 AVFPFLRFAITMFLFYSLLPILLRTNGSTMFTLSLLTSDMWAVLIRIFAYHEKVDWLYYL 289

Query:   291 AFGIVVIGLIIYSTTEKDLNPMPDLENRISDLQYQILDNENVASTNEPS 339
             AF    IGLIIYS  EKD     + E R  + + ++LD E   S  + S
Sbjct:   290 AFATTAIGLIIYSMKEKD-----EEEER-EEQRKKLLDEEEGQSLPDTS 332

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2081212 AT3G59320 "AT3G59320" [Arabidopsis thaliana (taxid:3702)]

 Score = 384 (140.2 bits), Expect = 1.4e-66, Sum P(2) = 1.4e-66
 Identities = 71/138 (51%), Positives = 98/138 (71%)

Query:   171 LVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTN 230
             LVIAG   +A SNV EEF VK  D  E++  +G++G +++A+Q+SI E  ++ +++WST 
Sbjct:   168 LVIAGATLYAVSNVTEEFLVKNADVTELMAFLGLFGAIIAAIQISIFERGAVRAIQWSTE 227

Query:   231 ILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFL 290
              +L + G A   F+FYTL   ++K +G+TMFNLSLLT+DMWA++ R   YH+KVDWLYFL
Sbjct:   228 AILLYIGGALGLFLFYTLITILIKNNGSTMFNLSLLTSDMWAILIRTFGYHEKVDWLYFL 287

Query:   291 AFGIVVIGLIIYSTTEKD 308
             AF     GLIIYS  EKD
Sbjct:   288 AFATTATGLIIYSMKEKD 305

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2081197 AT3G59310 "AT3G59310" [Arabidopsis thaliana (taxid:3702)]

 Score = 309 (113.8 bits), Expect = 9.9e-52, Sum P(2) = 9.9e-52
 Identities = 61/120 (50%), Positives = 80/120 (66%)

Query:    16 TLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQ 75
             T +TL  L LGQL+S       FTSS +A  G++ P +Q    Y  LA+VYG ++LYRR 
Sbjct:    10 TKKTLIGLGLGQLLSLLATSNGFTSSELARKGINVPTSQCFLNYVLLAIVYGSIMLYRRS 69

Query:    76 RLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSL 135
              ++  WY+Y LL FVDV+ NFLV KAYQ++S+TSV LLDC  I   +VLTW +L T+Y L
Sbjct:    70 DIKAKWYYYFLLAFVDVEANFLVVKAYQYTSLTSVMLLDCWAIPCVLVLTWFYLKTKYRL 129

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

WB|WBGene00022270 Y73E7A.3 [Caenorhabditis elegans (taxid:6239)]

 Score = 283 (104.7 bits), Expect = 1.4e-45, Sum P(2) = 1.4e-45
 Identities = 55/137 (40%), Positives = 87/137 (63%)

Query:   170 VLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWST 229
             +L +A  + +A  NV EEF VK+  R E + M+G++G +VS VQ ++ E ++L  + W  
Sbjct:   221 ILCLAAAVMYAICNVAEEFLVKQHSRTEYLGMLGLFGCIVSGVQTAVFEQEALSKIVWDG 280

Query:   230 NILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYF 289
              I+  FA +A S F+FY+L   VL+ + A MFNLS LTAD ++++F I  +     +LYF
Sbjct:   281 TIVSYFALFAFSMFIFYSLVTVVLQKTSALMFNLSTLTADFYSLLFGIFMFKDTFHYLYF 340

Query:   290 LAFGIVVIGLIIYSTTE 306
             ++F + +IG +IYS  E
Sbjct:   341 VSFIVCIIGSVIYSMKE 357

GO:0016020 "membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q5T1Q4 SLC35F1 "Solute carrier family 35 member F1" [Homo sapiens (taxid:9606)]

 Score = 285 (105.4 bits), Expect = 5.3e-45, Sum P(2) = 5.3e-45
 Identities = 61/170 (35%), Positives = 97/170 (57%)

Query:   170 VLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWST 229
             +LV+ G   +  SNV EE+ ++   RVE + MIG++G   S +QL+I+E K L  V W  
Sbjct:   221 LLVLGGATLYGISNVWEEYIIRTLSRVEFLGMIGLFGAFFSGIQLAIMEHKELLKVPWDW 280

Query:   230 NILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYF 289
              I L + G++A  F  Y+  P V+K + AT  NLSLLTAD++++   +  +H K   LY 
Sbjct:   281 QIGLLYVGFSACMFGLYSFMPVVIKKTSATSVNLSLLTADLYSLFCGLFLFHYKFSGLYL 340

Query:   290 LAFGIVVIGLIIYSTTEKDLNPMPDLENRISDLQYQILDNENVASTNEPS 339
             L+F  ++IGL++YS+T   +   P +  +  +    ++D    A   EPS
Sbjct:   341 LSFFTILIGLVLYSSTSTYIAQDPRVYKQFRNPSGPVVDLPTTAQV-EPS 389

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:2139810 Slc35f1 "solute carrier family 35, member F1" [Mus musculus (taxid:10090)]

 Score = 281 (104.0 bits), Expect = 6.7e-45, Sum P(2) = 6.7e-45
 Identities = 61/170 (35%), Positives = 97/170 (57%)

Query:   170 VLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWST 229
             +LV+ G   +  SNV EE  ++   RVE + MIG++G   S +QL+I+E K L  V W  
Sbjct:   221 LLVLGGATLYGISNVWEESIIRTLSRVEFLGMIGLFGAFFSGIQLAIMEHKELLKVPWDW 280

Query:   230 NILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYF 289
              I L + G++A  F  Y+  P V+K + AT  NLSLLTAD++++   +  +H K   LY 
Sbjct:   281 QIGLLYVGFSACMFGLYSFMPVVIKKTSATSVNLSLLTADLYSLFCGLFLFHYKFSGLYL 340

Query:   290 LAFGIVVIGLIIYSTTEKDLNPMPDLENRISDLQYQILDNENVASTNEPS 339
             L+F  ++IGL++YS+T   +   P +  +  +    ++D  + A   EPS
Sbjct:   341 LSFFTILIGLVLYSSTSTYIAQDPRVYKQFRNPSGPVVDLPSTAQV-EPS 389

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

DICTYBASE|DDB_G0287003 DDB_G0287003 "solute carrier family 35 member protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
 Identities = 107/328 (32%), Positives = 178/328 (54%)

Query:    23 LFLGQLVSFTLALMS-FTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRR---QRLR 78
             L LGQL+S  +A    F+  L+   GV+ P TQS   Y  L  VY  VL+ R    + ++
Sbjct:    31 LALGQLLSVMIAGTGIFSQLLVKKYGVNIPTTQSLLNYILLC-VYLLVLVKRGVLWETIK 89

Query:    79 VAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQX 138
                 ++  L  VD++ N++V KAYQ+++ITSV LLDC TI   +VL+ +FL TR++    
Sbjct:    90 TKSIYFAPLALVDLEANYIVVKAYQYTTITSVMLLDCFTIPCVVVLSRIFLKTRFTFVHI 149

Query:   139 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV---LVIAGTIFFATSNVGEEFFVKKKDR 195
                                            +   L +A ++ +A SNVG+E  VKK DR
Sbjct:   150 IAVLIALAGMAILVVSDIIEGESANGGSNPLLGDFLCLASSVCYAISNVGQEATVKKYDR 209

Query:   196 VEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKL 255
             V  + MIG+YG +   +Q++ILE   L ++ WS  ++    G+A   F+ Y+  P ++++
Sbjct:   210 VTYLAMIGLYGSIFCGIQIAILERNELATMAWSGGVVGYIVGFALCLFIMYSFTPTMMEI 269

Query:   256 SGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLNPMPDL 315
             +GAT+ NLSLLT+DM+ ++  I  + + + WLYFL+F ++V  L+IY+ +   +    ++
Sbjct:   270 AGATVMNLSLLTSDMFGIIVAIFVFDRDLSWLYFLSFFVIVSALVIYNLSAPHVKSS-EV 328

Query:   316 ENRISD--LQYQILDNENVASTNEPSDS 341
             +N I++       + N N  S N+ S++
Sbjct:   329 QNLINNDNSNNNNISNYNNGSLNDSSNN 356

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

MGI|MGI:1919272 Slc35f2 "solute carrier family 35, member F2" [Mus musculus (taxid:10090)]

 Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
 Identities = 100/311 (32%), Positives = 160/311 (51%)

Query:    12 RSHVTLRTLYLLFLGQLVSFTLALMSFTSSLIAD-LGVDAPVTQSAFAYFSLALVYGGVL 70
             R   T   L  + LGQ++S  +   + TS  +A+   V+ P+ QS   Y  L LVY  +L
Sbjct:    32 RKLFTWDILKTIALGQMLSLCICGTAITSQYLAEKYRVNTPMLQSFINYCLLFLVYTLML 91

Query:    71 LYRR------QRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVL 124
              ++       + LR  W+ Y LLG  DV+ N+L+ +AYQ++++TSV LLDC  I   + L
Sbjct:    92 AFQSGSDNLLEILRRKWWKYTLLGLADVEANYLIVRAYQYTTLTSVQLLDCFGIPVLMAL 151

Query:   125 TWLFLGTRYSLWQXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXVLVIAGTIFFAT 181
             +W  L  RY +                                     +LV+ G   +A 
Sbjct:   152 SWFILRARYKVIHFIAVFVCLLGVGTMVGADILAGREDNSGSDVLIGDILVLLGASLYAV 211

Query:   182 SNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAAS 241
             SNV EE+ VKK  R E + M+G++G ++S +QL I+E K +  ++W   I L F  +A  
Sbjct:   212 SNVCEEYIVKKLSRQEFLGMVGLFGTIISGIQLLIVEYKDIARIQWDWKIALLFVAFALC 271

Query:   242 SFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLII 301
              F  Y+  P V+K++ AT  NL +LTAD++++ F +  +  K   LY L+F ++++G I+
Sbjct:   272 MFCLYSFMPLVIKVTSATSVNLGILTADLYSLFFGLFLFEYKFSGLYILSFTVIMVGFIL 331

Query:   302 Y-STTEKDLNP 311
             Y ST  + + P
Sbjct:   332 YCSTPTRTVEP 342

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q8IXU6 SLC35F2 "Solute carrier family 35 member F2" [Homo sapiens (taxid:9606)]

 Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
 Identities = 95/300 (31%), Positives = 155/300 (51%)

Query:    16 TLRTLYLLFLGQLVSFTLALMSFTSSLIAD-LGVDAPVTQSAFAYFSLALVYGGVLLYRR 74
             T   L  + LGQ++S  +   + TS  +A+   V+ P+ QS   Y  L L+Y  +L +R 
Sbjct:    36 TWNILKTIALGQMLSLCICGTAITSQYLAERYKVNTPMLQSFINYCLLFLIYTVMLAFRS 95

Query:    75 QR------LRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLF 128
                     L+  W+ Y+LLG  DV+ N+++ +AYQ++++TSV LLDC  I   + L+W  
Sbjct:    96 GSDNLLVILKRKWWKYILLGLADVEANYVIVRAYQYTTLTSVQLLDCFGIPVLMALSWFI 155

Query:   129 LGTRYSLWQXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXVLVIAGTIFFATSNVG 185
             L  RY +                                     +LV+ G   +A SNV 
Sbjct:   156 LHARYRVIHFIAVAVCLLGVGTMVGADILAGREDNSGSDVLIGDILVLLGASLYAISNVC 215

Query:   186 EEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMF 245
             EE+ VKK  R E + M+G++G ++S +QL I+E K + S+ W   I L F  +A   F  
Sbjct:   216 EEYIVKKLSRQEFLGMVGLFGTIISGIQLLIVEYKDIASIHWDWKIALLFVAFALCMFCL 275

Query:   246 YTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTT 305
             Y+  P V+K++ AT  NL +LTAD++++   +  +  K   LY L+F ++++G I+Y +T
Sbjct:   276 YSFMPLVIKVTSATSVNLGILTADLYSLFVGLFLFGYKFSGLYILSFTVIMVGFILYCST 335

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

ASPGD|ASPL0000029133 AN5236 [Emericella nidulans (taxid:162425)]

 Score = 261 (96.9 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
 Identities = 46/140 (32%), Positives = 79/140 (56%)

Query:   170 VLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWST 229
             +  + G  F+  +N GEEFFV      EV+  +G +G++++ VQ +I + KS++   W  
Sbjct:   222 LFALLGASFYGLANTGEEFFVSTAPVYEVIGQMGFFGMIINGVQAAIFDRKSIQHAHWDG 281

Query:   230 NILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYF 289
              +     GY     +FY+ AP + +L+ A  FN+SLLT + W V+  I  +H  V W+Y 
Sbjct:   282 QVGGYLTGYTLCLSIFYSTAPLLFRLASAAFFNISLLTMNFWGVIIGIRVFHYSVHWMYP 341

Query:   290 LAFGIVVIGLIIYSTTEKDL 309
             +AF ++++G ++Y    K L
Sbjct:   342 IAFVLIIVGQLVYYLGRKVL 361

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	341
pfam06027	336	pfam06027, DUF914, Eukaryotic protein of unknown f	1e-104
pfam08449	303	pfam08449, UAA, UAA transporter family	3e-09
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	4e-07
TIGR00950	260	TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Tran	0.002
pfam00892	126	pfam00892, EamA, EamA-like transporter family	0.003
pfam13536	112	pfam13536, EmrE, Multidrug resistance efflux trans	0.004

>gnl|CDD|218861 pfam06027, DUF914, Eukaryotic protein of unknown function (DUF914)

 Score =  307 bits (789), Expect = e-104
 Identities = 137/302 (45%), Positives = 193/302 (63%), Gaps = 9/302 (2%)

Query: 16  TLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRR- 74
           T RTL  L LGQ++S  +   + TS  +A+ GV+AP  Q+   Y  L LVY G+L +RR 
Sbjct: 9   TKRTLIGLALGQILSLCITGTATTSQYLAEKGVNAPAFQTFLNYALLFLVYTGILAFRRG 68

Query: 75  -----QRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFL 129
                  ++  W+ Y++L  +DV+ N+LV KAYQ++++TSV LLDC  I   +VL+W FL
Sbjct: 69  EKNLLVIIKRKWWKYIILALIDVEANYLVVKAYQYTNLTSVQLLDCWAIPVVLVLSWFFL 128

Query: 130 GTRYSLWQLLGAALCVLGLGLVLLSDA---GGDGGGSRPLLGDVLVIAGTIFFATSNVGE 186
             RY    +LG  +C+LG+  V+ SD        GGS P+LGD+LV+AG   +A SNV E
Sbjct: 129 KVRYRASHILGVVICILGVVCVVGSDVLAGRRAYGGSNPVLGDILVLAGATLYAVSNVTE 188

Query: 187 EFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFY 246
           EF VKK  R E + M+G++G ++S +Q +I E K+L  + W   I L FAG+A   F+ Y
Sbjct: 189 EFLVKKLSRTEFLGMLGLFGAIISGIQTAIFERKALYKIHWDWEIGLLFAGFALCMFLLY 248

Query: 247 TLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTE 306
           +L P ++K + ATMFNLSLLT+D W+++  I  +H KV WLYFLAF  ++IGLIIYS  E
Sbjct: 249 SLMPILIKKTSATMFNLSLLTSDFWSLLIGIFLFHYKVSWLYFLAFATIIIGLIIYSMKE 308

Query: 307 KD 308
            D
Sbjct: 309 TD 310

This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as being putative membrane proteins. Length = 336

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score = 56.8 bits (138), Expect = 3e-09
 Identities = 53/266 (19%), Positives = 104/266 (39%), Gaps = 25/266 (9%)

Query: 57  FAYFSLALVYGGVLLYRRQRLR---VAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLL 113
           FA F    + G + L   ++L+   +    Y+L+       + L N+A ++ S  +  + 
Sbjct: 37  FAQFLFISLVGLLYLLLFKKLKPRKIPLKTYVLIVATFFLSSVLNNEALKYISYPTHVIF 96

Query: 114 DCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGS----RPLLGD 169
             C +   ++L  L  G RYS  Q L A L  LG+ +  L+ A              +G 
Sbjct: 97  KSCKLIPVMILGILIYGKRYSSLQYLSALLITLGVIIFTLASAKDSKNSKLTTFSDNVG- 155

Query: 170 VLVIAGTIFF--ATSNVGEEFFVK-KKDRVEVVC---MIGVYGLLVSAVQLSILELKSLE 223
           + ++ G +     T N  E+ + K  K   E++    ++ +   L+  + +    L S E
Sbjct: 156 IALLFGALLMDALTGNTQEKLYKKYGKHSKEMMFYSHLLSLPFFLLGLLDIRTGLLFSAE 215

Query: 224 S------VEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRI 277
           S            +L     Y    F+FY ++ F     GA    L        +++  +
Sbjct: 216 SFCLRHPSVLFYLLLNSLTQYVGQFFVFYLISEF-----GALTVTLVTTLRKFVSLLLSV 270

Query: 278 CFYHQKVDWLYFLAFGIVVIGLIIYS 303
             +   +    +L   +V +G+ +Y+
Sbjct: 271 LLFGNPLTLQQWLGTLLVFLGIFLYA 296

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 50.6 bits (121), Expect = 4e-07
 Identities = 62/294 (21%), Positives = 111/294 (37%), Gaps = 11/294 (3%)

Query: 18  RTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRL 77
             L  L    L      L      L  +         +     +  L+   +LL  R   
Sbjct: 4   ALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLR 63

Query: 78  RVAWYWYLLL---GFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTW-LFLGTRY 133
                W LLL            L+  A +++S +  +L+      +  +L   L LG R 
Sbjct: 64  PALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERL 123

Query: 134 SLWQLLGAALCVLGLGLVLLSDAGGDGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKK 193
           SL Q+LG  L + G+ L+LL   GG GGG   LLG +L +A  + +A      +   +  
Sbjct: 124 SLLQILGILLALAGVLLILL---GGGGGGILSLLGLLLALAAALLWALYTALVKRLSRLG 180

Query: 194 DRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVL 253
                + +  +  LL+  +         + S  W   + LG      +  ++Y      L
Sbjct: 181 PVTLALLLQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLAYLLWYYA----L 236

Query: 254 KLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEK 307
           +L GA++  L  L   ++A +  +    + +     L   +VV+G+++ S   +
Sbjct: 237 RLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLRAR 290

Length = 292

>gnl|CDD|233205 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Transporter

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 47/236 (19%), Positives = 83/236 (35%), Gaps = 16/236 (6%)

Query: 70  LLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFL 129
           LL RR  L+      LL          L   A +   +    LL      +  +L+ L  
Sbjct: 36  LLRRRPPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMG 95

Query: 130 GTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSRPLLGDVLVIAGTIFFATSNVGEEFF 189
             R     LL A L + G  L+L      DG  S    G +L +   I FA   V  +  
Sbjct: 96  KERPRKLVLLAAVLGLAGAVLLL-----SDGNLSINPAGLLLGLGSGISFALGTVLYKRL 150

Query: 190 VKKKD-----RVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFM 244
           VKK+          V ++G   LL+      +       S++W   + LG  G A + F+
Sbjct: 151 VKKEGPELLQFTGWVLLLG--ALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTALAYFL 208

Query: 245 FYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLI 300
           +      V   + + +     L A +  ++       + +     +   +++  ++
Sbjct: 209 WNKGLTLVDPSAASILALAEPLVALLLGLL----ILGETLSLPQLIGGALIIAAVL 260

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 260

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 37.2 bits (87), Expect = 0.003
 Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 1/75 (1%)

Query: 80  AWYWYLLLGFVD-VQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQL 138
           A    L LG      G  L   A ++ S ++ +++   +  + ++L+ L LG + +L QL
Sbjct: 52  AILALLYLGLFGTALGYLLYFYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQL 111

Query: 139 LGAALCVLGLGLVLL 153
           LG  L +LG+ L+LL
Sbjct: 112 LGIVLILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|222207 pfam13536, EmrE, Multidrug resistance efflux transporter

 Score = 36.5 bits (85), Expect = 0.004
 Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 8/111 (7%)

Query: 55  SAFAYFSLALVYGGVLLYRRQRLRV-------AWYWYLLLGFVDVQGNFLVNKAYQFSSI 107
           ++  Y  +AL+   ++L R +   V        W W +L G +      L+  A Q+   
Sbjct: 1   ASLRYLFMALLLLLIVLIRGRLGDVFRALKTKPWLWLILAGLIGFLFYALLCLALQYGPG 60

Query: 108 TSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGG 158
             V  +   T  +A +L  L    R    +LL +A+ + G+ L+ +++A G
Sbjct: 61  W-VVAITALTPVFAALLGRLLFKQRLPKRELLASAIILAGVVLMQVTEATG 110

This is a membrane protein family acting as a multidrug resistance efflux transporter. Length = 112

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	341
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	100.0
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PRK11272	292	putative DMT superfamily transporter inner membran	99.98
PRK11689	295	aromatic amino acid exporter; Provisional	99.97
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.97
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.97
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.97
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.97
PRK15430	296	putative chloramphenical resistance permease RarD;	99.96
KOG2766	336	consensus Predicted membrane protein [Function unk	99.96
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.96
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.94
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.92
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.92
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.88
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.88
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.88
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.86
COG2962	293	RarD Predicted permeases [General function predict	99.84
KOG2765	416	consensus Predicted membrane protein [Function unk	99.8
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.78
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.77
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.73
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.68
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.6
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.59
KOG1582	367	consensus UDP-galactose transporter related protei	99.58
KOG1581	327	consensus UDP-galactose transporter related protei	99.58
KOG1580	337	consensus UDP-galactose transporter related protei	99.54
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.51
COG2510	140	Predicted membrane protein [Function unknown]	99.46
COG2510	140	Predicted membrane protein [Function unknown]	99.37
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.36
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.31
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.28
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.28
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.25
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.25
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.15
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.14
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.13
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.04
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	99.03
PRK13499	345	rhamnose-proton symporter; Provisional	98.96
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.89
PRK15430	296	putative chloramphenical resistance permease RarD;	98.88
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.87
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.86
PRK11272	292	putative DMT superfamily transporter inner membran	98.82
PLN00411	358	nodulin MtN21 family protein; Provisional	98.79
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.78
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.74
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	98.7
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.69
PRK11689	295	aromatic amino acid exporter; Provisional	98.69
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.62
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.6
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.58
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.58
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.41
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.4
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.33
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.28
COG2962	293	RarD Predicted permeases [General function predict	98.24
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.22
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	97.91
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.91
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.89
COG2076	106	EmrE Membrane transporters of cations and cationic	97.89
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.84
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.82
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.8
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.75
PRK11431	105	multidrug efflux system protein; Provisional	97.75
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.74
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	97.74
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.65
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.55
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	97.53
COG2076	106	EmrE Membrane transporters of cations and cationic	97.5
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.43
PRK11431	105	multidrug efflux system protein; Provisional	97.4
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.39
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.31
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.25
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.21
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	97.11
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.1
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	97.04
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.86
PRK13499	345	rhamnose-proton symporter; Provisional	96.8
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	96.6
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.48
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	96.46
KOG2765	416	consensus Predicted membrane protein [Function unk	96.16
KOG1581	327	consensus UDP-galactose transporter related protei	95.96
KOG1580	337	consensus UDP-galactose transporter related protei	95.87
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.84
KOG2922	335	consensus Uncharacterized conserved protein [Funct	95.36
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	95.23
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	94.03
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	93.83
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	93.55
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	93.48
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	93.16
PRK02237	109	hypothetical protein; Provisional	92.7
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	90.4
KOG3912	372	consensus Predicted integral membrane protein [Gen	90.27
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	89.72
PRK02237	109	hypothetical protein; Provisional	89.38
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	89.31
KOG4831	125	consensus Unnamed protein [Function unknown]	88.9
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	88.81
KOG1443	349	consensus Predicted integral membrane protein [Fun	88.0
KOG1582	367	consensus UDP-galactose transporter related protei	80.85

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=100.00  E-value=2.3e-38  Score=279.22  Aligned_cols=298  Identities=45%  Similarity=0.825  Sum_probs=272.3

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhhh------hhHHHHHHHHHH
Q 019439           15 VTLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR------LRVAWYWYLLLG   88 (341)
Q Consensus        15 ~~~~~~~g~~~~~~~al~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~------~~~~~~~~~~~g   88 (341)
                      ++|+.++.+++|+++++|.++++.+++.+.+++..-|..++++.++...+++.++...|++.      .+++|+++++.+
T Consensus         7 ~~~~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla   86 (334)
T PF06027_consen    7 FTRRFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLA   86 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHH
Confidence            67899999999999999999999999999998887899999999999888888877666533      567889999999


Q ss_pred             HHHHHHHHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCCCC--C-CCCCcc
Q 019439           89 FVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGG--D-GGGSRP  165 (341)
Q Consensus        89 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~~~--~-~~~~~~  165 (341)
                      ++...+|++.+.|++|++.+.++++.++..+++++++++++|||+++.|++|+++++.|+.++...|...  + ....++
T Consensus        87 ~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~  166 (334)
T PF06027_consen   87 LLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNP  166 (334)
T ss_pred             HHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCcc
Confidence            9999999999999999999999999999999999999999999999999999999999999998876522  1 245678


Q ss_pred             hHHhHHHHHHHHHHHHHHHHHHHHhhcCCchhhhHHhHHHHHHHHHHHHHhccccccccccccchHHHHHHHHHHHHHHH
Q 019439          166 LLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMF  245 (341)
Q Consensus       166 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (341)
                      ..|+++++.++++||++++..|+..++.|..++..+.++++.++..+...+.|..+.+..+|.......+++..++.+..
T Consensus       167 i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~lf~~  246 (334)
T PF06027_consen  167 ILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALCLFLF  246 (334)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999988888889988888888888888888888899999


Q ss_pred             HHHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeeccccCCCCC
Q 019439          246 YTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLNPM  312 (341)
Q Consensus       246 ~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~~  312 (341)
                      |.+....++..+|+..++..++..+++++++++++|+++++..++|.++|++|.++++..+++.+++
T Consensus       247 y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~~  313 (334)
T PF06027_consen  247 YSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEEEA  313 (334)
T ss_pred             HHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCccccc
Confidence            9999999999999999999999999999999999999999999999999999999999877655444

Some of the sequences in this family are annotated as putative membrane proteins.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=7.9e-32  Score=243.05  Aligned_cols=287  Identities=14%  Similarity=0.144  Sum_probs=219.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhh---hh---hHHHHHHHHHHHHHHH
Q 019439           20 LYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQ---RL---RVAWYWYLLLGFVDVQ   93 (341)
Q Consensus        20 ~~g~~~~~~~al~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~---~~---~~~~~~~~~~g~~~~~   93 (341)
                      .+..+....+-++..+.....+...+ ...+|..+.++|+.+++++++++.+.+++   .+   ++++....+.|+++..
T Consensus        12 ~~~~~~~~~~q~~~~~~~~~~k~a~~-~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~   90 (358)
T PLN00411         12 AVFLTAMLATETSVVGISTLFKVATS-KGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSM   90 (358)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHH-CCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHH
Confidence            34556666666777888888887775 45678889999999999999888764422   12   3445677778888844


Q ss_pred             HHHHHHHhhhccchhHHHHhhhchHHHHHHHHHHH------hhcccchhhHHHHHHHHHhhHHHhhcCCCC---------
Q 019439           94 GNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLF------LGTRYSLWQLLGAALCVLGLGLVLLSDAGG---------  158 (341)
Q Consensus        94 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~------l~e~~~~~~~ig~~l~~~Gv~l~~~~~~~~---------  158 (341)
                      .+.+++.+++|++++.++++.++.|+++.++++++      +|||+++++++|++++++|+.++...+...         
T Consensus        91 ~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~  170 (358)
T PLN00411         91 YVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPY  170 (358)
T ss_pred             HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccccc
Confidence            46689999999999999999999999999999999      699999999999999999999987633210         


Q ss_pred             ---------C-CCCCcchHHhHHHHHHHHHHHHHHHHHHHHhhcCCch-hhhHHhHHHHHHHHHHHHHhcccccccc--c
Q 019439          159 ---------D-GGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRV-EVVCMIGVYGLLVSAVQLSILELKSLES--V  225 (341)
Q Consensus       159 ---------~-~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  225 (341)
                               . ....+...|+.+.++++++|++|++..|+..+++++. ...+++...+.+...++....+..+...  .
T Consensus       171 ~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~  250 (358)
T PLN00411        171 LNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWII  250 (358)
T ss_pred             ccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCccccee
Confidence                     0 0111224599999999999999999999998887665 4455666666555554544443322111  1


Q ss_pred             cccc-hHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeec
Q 019439          226 EWST-NILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYST  304 (341)
Q Consensus       226 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  304 (341)
                      .+.. ...+++.+++ +. .+|.+|++++++.+++.+++..+++|+++++++++++||++++.+++|+++|+.|+.+.++
T Consensus       251 ~~~~~~~~i~y~~i~-t~-lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~  328 (358)
T PLN00411        251 HFDITLITIVTMAII-TS-VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMW  328 (358)
T ss_pred             ccchHHHHHHHHHHH-HH-HHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence            1222 2234455544 44 5689999999999999999999999999999999999999999999999999999999876


Q ss_pred             cccCC
Q 019439          305 TEKDL  309 (341)
Q Consensus       305 ~~~~~  309 (341)
                      .++++
T Consensus       329 ~~~~~  333 (358)
T PLN00411        329 GKANE  333 (358)
T ss_pred             hhhhh
Confidence            54443

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.98  E-value=2.1e-29  Score=223.78  Aligned_cols=275  Identities=13%  Similarity=0.104  Sum_probs=211.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhh--hhhHHHHHHHHHHHHHHHH-HHHHH
Q 019439           23 LFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQ--RLRVAWYWYLLLGFVDVQG-NFLVN   99 (341)
Q Consensus        23 ~~~~~~~al~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~--~~~~~~~~~~~~g~~~~~~-~~~~~   99 (341)
                      .+.-.+..++|+......|...  ++.+|..++++|+..+.++++++...+++  ..+++++.....|.++... +.+++
T Consensus        10 ~~~~~~~~~iWg~~~~~~K~~~--~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   87 (292)
T PRK11272         10 FGALFALYIIWGSTYLVIRIGV--ESWPPLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLAVGNGMVT   87 (292)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3333344455555555555443  36799999999999999998887765543  2455677777888877555 67888


Q ss_pred             Hhh-hccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCCCCCCCCCcchHHhHHHHHHHHH
Q 019439          100 KAY-QFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSRPLLGDVLVIAGTIF  178 (341)
Q Consensus       100 ~al-~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~G~~~~l~a~~~  178 (341)
                      .+. ++++++.++++.++.|+++.+++.+ +|||+++++++|++++++|+.++..++.     .+....|++++++++++
T Consensus        88 ~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~-----~~~~~~G~l~~l~a~~~  161 (292)
T PRK11272         88 VAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGN-----LSGNPWGAILILIASAS  161 (292)
T ss_pred             HHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcc-----cccchHHHHHHHHHHHH
Confidence            888 9999999999999999999999986 7999999999999999999998865421     12345799999999999


Q ss_pred             HHHHHHHHHHHhhcCCchhhhHHhHHHHHHHHHHHHHhccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 019439          179 FATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGA  258 (341)
Q Consensus       179 ~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  258 (341)
                      ||.+.+..|+..++ ++.....+....+.....+.....+.......+...+..+.+++.. ++...|.++++++++.++
T Consensus       162 ~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~-~s~~~~~l~~~~~~~~~~  239 (292)
T PRK11272        162 WAFGSVWSSRLPLP-VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVF-GSIIAISAYMYLLRNVRP  239 (292)
T ss_pred             HHHHHHHHHhcCCC-cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHH-HHHHHHHHHHHHHhhcCH
Confidence            99999999997543 3444555666666666543333332211111233455566777776 666778999999999999


Q ss_pred             hHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeecccc
Q 019439          259 TMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEK  307 (341)
Q Consensus       259 ~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  307 (341)
                      ..++...+++|+++.+++++++||+++..+++|+.+++.|+++.++.++
T Consensus       240 ~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        240 ALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999998866444

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.97  E-value=3.4e-29  Score=222.67  Aligned_cols=276  Identities=14%  Similarity=0.131  Sum_probs=202.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHH-HHHHHH
Q 019439           22 LLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQG-NFLVNK  100 (341)
Q Consensus        22 g~~~~~~~al~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~  100 (341)
                      .++++...+++|+......|...  +..+|..+.+.|+.++.+++.++..  +++.++.+++.++.+.+.... +.+++.
T Consensus         5 ~~l~~l~a~~~Wg~~~~~~k~~~--~~~~P~~~~~~R~~~a~l~l~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~   80 (295)
T PRK11689          5 ATLIGLIAILLWSTMVGLIRGVS--ESLGPVGGAAMIYSVSGLLLLLTVG--FPRLRQFPKRYLLAGGLLFVSYEICLAL   80 (295)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHH--ccCChHHHHHHHHHHHHHHHHHHcc--ccccccccHHHHHHHhHHHHHHHHHHHH
Confidence            45566666666666666666543  3679999999999999988887642  222223333344455555544 556777


Q ss_pred             hhhc----cchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCCCCCC-----CCCcchHHhHH
Q 019439          101 AYQF----SSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDG-----GGSRPLLGDVL  171 (341)
Q Consensus       101 al~~----~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~-----~~~~~~~G~~~  171 (341)
                      ++++    .+++.++++.++.|+++.+++++++|||+++++++|++++++|+.++..++...+.     .......|+.+
T Consensus        81 a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~  160 (295)
T PRK11689         81 SLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGL  160 (295)
T ss_pred             HHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHH
Confidence            7754    57788899999999999999999999999999999999999999999865431100     01123469999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchhhhHHhHHHHHHHHHHHHHhccccccccccccchHHHHHHHHHHHHHHHHHHHHH
Q 019439          172 VIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPF  251 (341)
Q Consensus       172 ~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (341)
                      .++++++||.|+++.||..++.++.....   ..+.....+.... +.......++..+..+.+.+ . ++...|.++++
T Consensus       161 ~l~aa~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~~-~-~t~~~~~l~~~  234 (295)
T PRK11689        161 AFIGAFIWAAYCNVTRKYARGKNGITLFF---ILTALALWIKYFL-SPQPAMVFSLPAIIKLLLAA-A-AMGFGYAAWNV  234 (295)
T ss_pred             HHHHHHHHHHHHHHHhhccCCCCchhHHH---HHHHHHHHHHHHH-hcCccccCCHHHHHHHHHHH-H-HHHHHHHHHHH
Confidence            99999999999999999977777765432   2222222222222 22222223344455555555 3 56777999999


Q ss_pred             HHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeecccc
Q 019439          252 VLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEK  307 (341)
Q Consensus       252 ~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  307 (341)
                      ++++.++..++...+++|+++.+++++++||+++..+++|+++|+.|+++....++
T Consensus       235 al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~  290 (295)
T PRK11689        235 GILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATR  290 (295)
T ss_pred             HHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHh
Confidence            99999999999999999999999999999999999999999999999988765443

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.97  E-value=2.4e-28  Score=217.71  Aligned_cols=274  Identities=18%  Similarity=0.168  Sum_probs=204.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHH-HHHHHHhh
Q 019439           24 FLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQG-NFLVNKAY  102 (341)
Q Consensus        24 ~~~~~~al~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~al  102 (341)
                      ++....+++|+......+...+  +.+|..++++|+.++++.+.++..+++    .+++.....|++.... ..+++.++
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~--~~~p~~~~~~R~~~a~~~l~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~   80 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLH--NMPPLMLAGLRFMLVAFPAIFFVARPK----VPLNLLLGYGLTISFGQFAFLFCAI   80 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHHhcCCC----CchHHHHHHHHHHHHHHHHHHHHHH
Confidence            3455566777777777776543  589999999999988776665543222    1233344456555555 44678888


Q ss_pred             hc-cchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCCCCCCCCCcchHHhHHHHHHHHHHHH
Q 019439          103 QF-SSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSRPLLGDVLVIAGTIFFAT  181 (341)
Q Consensus       103 ~~-~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~  181 (341)
                      ++ .+++.++++.++.|+++.+++++++|||++++++++++++++|+.++..++..   ....+..|+.+++.++++|++
T Consensus        81 ~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~---~~~~~~~G~~l~l~aal~~a~  157 (299)
T PRK11453         81 NFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLN---GQHVAMLGFMLTLAAAFSWAC  157 (299)
T ss_pred             HhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCC---CcchhHHHHHHHHHHHHHHHH
Confidence            88 58899999999999999999999999999999999999999999999854321   122335799999999999999


Q ss_pred             HHHHHHHHhhcCCchh---hhHHhHHHHHHHHHHHHHhccccc-----cccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 019439          182 SNVGEEFFVKKKDRVE---VVCMIGVYGLLVSAVQLSILELKS-----LESVEWSTNILLGFAGYAASSFMFYTLAPFVL  253 (341)
Q Consensus       182 ~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (341)
                      |.++.|+..++.++..   ...+....+.+.........+.+.     ....++..+..+++++.+ ++...|.++++++
T Consensus       158 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~-~t~~~~~l~~~~l  236 (299)
T PRK11453        158 GNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFV-ATIVGYGIWGTLL  236 (299)
T ss_pred             HHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence            9999999865544332   233333333332222222222211     123344566677888877 7777789999999


Q ss_pred             hhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeecccc
Q 019439          254 KLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEK  307 (341)
Q Consensus       254 ~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  307 (341)
                      ++.++..++....++|+++.+++++++||+++..+++|+++|++|+.+..+.++
T Consensus       237 ~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        237 GRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            999999999999999999999999999999999999999999999998765443

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.97  E-value=5.3e-28  Score=214.79  Aligned_cols=276  Identities=14%  Similarity=0.082  Sum_probs=212.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhh-hhhhHHHHHHHHHHHHHHHHHH
Q 019439           18 RTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRR-QRLRVAWYWYLLLGFVDVQGNF   96 (341)
Q Consensus        18 ~~~~g~~~~~~~al~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~   96 (341)
                      ...+++.+......+++....+.+...+  ..+|..+.++|++++.++++++...++ +..+++++..+..|.+....+.
T Consensus         9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~--~~~~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   86 (293)
T PRK10532          9 PVWLPILLLLIAMASIQSGASLAKSLFP--LVGAPGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVSLGGMNY   86 (293)
T ss_pred             ccchHHHHHHHHHHHHHhhHHHHHHHHH--HcCHHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHHHHHHHH
Confidence            3466788888788888877777777765  478999999999999988887765433 2345667777788887666688


Q ss_pred             HHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCCCCCCCCCcchHHhHHHHHHH
Q 019439           97 LVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSRPLLGDVLVIAGT  176 (341)
Q Consensus        97 ~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~G~~~~l~a~  176 (341)
                      +++++++++|++.++++.++.|+++.+++    +|++.+  ..++.++++|+.++...+..   .......|++++++++
T Consensus        87 ~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~--~~~~~i~~~Gv~li~~~~~~---~~~~~~~G~ll~l~aa  157 (293)
T PRK10532         87 LFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVD--FVWVVLAVLGLWFLLPLGQD---VSHVDLTGAALALGAG  157 (293)
T ss_pred             HHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHH--HHHHHHHHHHHheeeecCCC---cccCChHHHHHHHHHH
Confidence            89999999999999999999999998876    355544  45667889999887743321   2223457999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCchhhhHHhHHHHHHHHHHHHHhccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 019439          177 IFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLS  256 (341)
Q Consensus       177 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (341)
                      ++|++|.+..|+..++.++.... +....++++..+ ....... ....++..+....+++++ ++...|.++++++++.
T Consensus       158 ~~~a~~~v~~r~~~~~~~~~~~~-~~~~~~~~~l~~-~~~~~~~-~~~~~~~~~~~~l~lgv~-~t~~~~~l~~~~~~~~  233 (293)
T PRK10532        158 ACWAIYILSGQRAGAEHGPATVA-IGSLIAALIFVP-IGALQAG-EALWHWSILPLGLAVAIL-STALPYSLEMIALTRL  233 (293)
T ss_pred             HHHHHHHHHHHHHhccCCchHHH-HHHHHHHHHHHH-HHHHccC-cccCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHhc
Confidence            99999999999997777776654 444555555533 3222221 111233344445677777 7777899999999999


Q ss_pred             hhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeeccccC
Q 019439          257 GATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKD  308 (341)
Q Consensus       257 ~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~  308 (341)
                      ++..++...+++|+++.+++++++||+++..+++|+++|++|++......++
T Consensus       234 ~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~  285 (293)
T PRK10532        234 PTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRR  285 (293)
T ss_pred             ChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCC
Confidence            9999999999999999999999999999999999999999999988655433

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.97  E-value=1.9e-28  Score=218.90  Aligned_cols=266  Identities=15%  Similarity=0.132  Sum_probs=204.6

Q ss_pred             HHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHH----HhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHH
Q 019439           37 SFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLL----YRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTL  112 (341)
Q Consensus        37 ~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~  112 (341)
                      ...+|...+ ....|...++.|+..+.+.+.+...    .+++..+++++..+..|++....+.+.+.+++|++++.+++
T Consensus        18 ~~~NK~~l~-~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~l   96 (302)
T TIGR00817        18 NIYNKKLLN-VFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHT   96 (302)
T ss_pred             HHHHHHHHh-hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence            344454443 3567999999999888776655521    11233466788899999997666889999999999999999


Q ss_pred             hhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCCCCCCCCCcchHHhHHHHHHHHHHHHHHHHHHHHhh-
Q 019439          113 LDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVK-  191 (341)
Q Consensus       113 l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~-  191 (341)
                      +.++.|+++++++.+++|||+++++++|++++++|+.+....      +.+....|+++.++++++|+++.++.|+..+ 
T Consensus        97 i~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~------~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~  170 (302)
T TIGR00817        97 IKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDT------ELSFNWAGFLSAMISNITFVSRNIFSKKAMTI  170 (302)
T ss_pred             HHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCC------cccccHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            999999999999999999999999999999999999876422      2233457999999999999999999999988 


Q ss_pred             -cCCchhhhHHhHHHHHHHHHHHHHhccccccccccc-------cc-hHH--HHHHHHHHHHHHHHHHHHHHHhhhhhhH
Q 019439          192 -KKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEW-------ST-NIL--LGFAGYAASSFMFYTLAPFVLKLSGATM  260 (341)
Q Consensus       192 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~a~~  260 (341)
                       +.|+.+...++...+.+...+.....+.......++       .. ..+  ....+.+ +....+.+++.++++.++..
T Consensus       171 ~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~sa~t  249 (302)
T TIGR00817       171 KSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMG-FFHFYQQVAFMLLGRVSPLT  249 (302)
T ss_pred             CCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHH-HHHHHHHHHHHHHccCCchH
Confidence             789999999999888888765544444322111101       11 111  1111111 22222345667999999999


Q ss_pred             HHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeeccccCCC
Q 019439          261 FNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLN  310 (341)
Q Consensus       261 ~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~  310 (341)
                      .++...++|++++++|++++||+++..+++|+++++.|+.++++.+++|+
T Consensus       250 ~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~  299 (302)
T TIGR00817       250 HSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKP  299 (302)
T ss_pred             HHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCc
Confidence            99999999999999999999999999999999999999999987654443

specificities overlap.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.97  E-value=9.1e-28  Score=210.27  Aligned_cols=254  Identities=17%  Similarity=0.073  Sum_probs=201.1

Q ss_pred             HHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHH-HHHHHHhhhccchhHHHHhh
Q 019439           36 MSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQG-NFLVNKAYQFSSITSVTLLD  114 (341)
Q Consensus        36 ~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~al~~~~~~~~~~l~  114 (341)
                      .....+...+ +..+|....+.|++.+.+++.+....+  +.+++++.....|.++... +.+++.|++|+++++++++.
T Consensus         4 ~~~~~k~~~~-~~~~~~~~~~~r~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~   80 (260)
T TIGR00950         4 TGVVIGQYLE-GQVPLYFAVFRRLIFALLLLLPLLRRR--PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLL   80 (260)
T ss_pred             hHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhc--cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHH
Confidence            3344455433 356889899999888888777765444  4555667777888777666 77999999999999999999


Q ss_pred             hchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCCCCCCCCCcchHHhHHHHHHHHHHHHHHHHHHHHhhcCC
Q 019439          115 CCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKD  194 (341)
Q Consensus       115 ~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~  194 (341)
                      ++.|+++.+++.+++|||+++++++|++++++|+.++..++     ..+....|+.+++.++++|+.+.+..|+..++.+
T Consensus        81 ~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~-----~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~  155 (260)
T TIGR00950        81 YLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDG-----NLSINPAGLLLGLGSGISFALGTVLYKRLVKKEG  155 (260)
T ss_pred             hhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCC-----cccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCC
Confidence            99999999999999999999999999999999999987543     2234568999999999999999999999987777


Q ss_pred             chh--hhHHhHHHHHHHHHHHHHhccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHhhhhhhHHHH
Q 019439          195 RVE--VVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWA  272 (341)
Q Consensus       195 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~  272 (341)
                      +..  ...+.+..+.++..+.....+...  ..+...+....+.+.+ ++..+|.++++++++.++..++....++|+++
T Consensus       156 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~  232 (260)
T TIGR00950       156 PELLQFTGWVLLLGALLLLPFAWFLGPNP--QALSLQWGALLYLGLI-GTALAYFLWNKGLTLVDPSAASILALAEPLVA  232 (260)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhcCCCC--CcchHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence            543  333556666666643333332221  2233444456666666 56667899999999999999999999999999


Q ss_pred             HHHHHHHhccccchhhhhHHhhheeeee
Q 019439          273 VVFRICFYHQKVDWLYFLAFGIVVIGLI  300 (341)
Q Consensus       273 ~l~~~~~~~e~~~~~~~~G~~li~~g~~  300 (341)
                      .+++++++||+++..+++|.++++.|+.
T Consensus       233 ~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       233 LLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            9999999999999999999999998863

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.96  E-value=4.6e-27  Score=209.10  Aligned_cols=271  Identities=15%  Similarity=0.088  Sum_probs=195.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhh--hh---h--HHHHHHHHHHHH
Q 019439           18 RTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQ--RL---R--VAWYWYLLLGFV   90 (341)
Q Consensus        18 ~~~~g~~~~~~~al~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~--~~---~--~~~~~~~~~g~~   90 (341)
                      ++.||.++..+.+++++......+..   ...+|..+.++|++++.+++.++...+++  ..   .  ++.......+.+
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~---~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI---YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAV   81 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHH
Confidence            44678999888888888888888764   34789999999999998877766543321  11   1  111122335555


Q ss_pred             HHHH-HHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCCCCCCCCCcchHHh
Q 019439           91 DVQG-NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSRPLLGD  169 (341)
Q Consensus        91 ~~~~-~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~G~  169 (341)
                      +... +.++++|+++++++.++++.++.|+++++++++++|||+++++++|++++++|+.++..+++     + .    .
T Consensus        82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~-----~-~----~  151 (296)
T PRK15430         82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG-----S-L----P  151 (296)
T ss_pred             HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC-----C-c----c
Confidence            5555 88999999999999999999999999999999999999999999999999999999885421     1 1    1


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCc--hhhhHHhHHHHHHHHHHHHHhccccc--cccccccchHHHHHHHHHHHHHHH
Q 019439          170 VLVIAGTIFFATSNVGEEFFVKKKDR--VEVVCMIGVYGLLVSAVQLSILELKS--LESVEWSTNILLGFAGYAASSFMF  245 (341)
Q Consensus       170 ~~~l~a~~~~a~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  245 (341)
                      .++++++++||.|.+..|+..++...  .....+....+.+...   ...+...  ....++..+......+.  .+...
T Consensus       152 ~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~--~t~i~  226 (296)
T PRK15430        152 IIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLF---AIADSSTSHMGQNPMSLNLLLIAAGI--VTTVP  226 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHH---HHccCCcccccCCcHHHHHHHHHHHH--HHHHH
Confidence            46888999999999999886432211  1112223223322211   1111111  11111111222222333  44466


Q ss_pred             HHHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeeccc
Q 019439          246 YTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTE  306 (341)
Q Consensus       246 ~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  306 (341)
                      |.++++++++.++..++...+++|+++.+++++++||+++..+++|+++|+.|+.+...+.
T Consensus       227 ~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~  287 (296)
T PRK15430        227 LLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDA  287 (296)
T ss_pred             HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999999999999999999999999999999999988887776443

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.96  E-value=1.2e-30  Score=213.07  Aligned_cols=290  Identities=47%  Similarity=0.876  Sum_probs=261.9

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Q 019439           16 TLRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGN   95 (341)
Q Consensus        16 ~~~~~~g~~~~~~~al~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   95 (341)
                      +|++++|+.+|+++++|.++.++.++.++.++...|..++|..+...+++..++...|++..+..|.+++++++...-+|
T Consensus        13 tkk~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~~~~~~~hYilla~~DVEaN   92 (336)
T KOG2766|consen   13 TKKTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRKYIKAKWRHYILLAFVDVEAN   92 (336)
T ss_pred             chhhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhHHHHHHHHHhhheeEEeeccc
Confidence            88999999999999999999999999999998888999999999999999999999999888888999999999999999


Q ss_pred             HHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCC--CCCCCCCcchHHhHHHH
Q 019439           96 FLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDA--GGDGGGSRPLLGDVLVI  173 (341)
Q Consensus        96 ~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~--~~~~~~~~~~~G~~~~l  173 (341)
                      ++...|.||++...+..+.+-..+.+.+++++++|.|..+.++.|+++++.|++++...|.  ++...+.++..|+.+.+
T Consensus        93 y~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi  172 (336)
T KOG2766|consen   93 YFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVI  172 (336)
T ss_pred             EEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEE
Confidence            9999999999999999999999999999999999999999999999999999999998776  33356778899999999


Q ss_pred             HHHHHHHHHHHHHHHHhhcCCchhhhHHhHHHHHHHHHHHHHhccccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 019439          174 AGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVL  253 (341)
Q Consensus       174 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (341)
                      +++-+||+.++..+.+.|+.|..+.+...++.|+++..+. .+.+........|.+. ...++.+.++++..|.+....+
T Consensus       173 ~GATlYaVSNv~EEflvkn~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~~~-i~~yl~f~L~MFllYsl~pil~  250 (336)
T KOG2766|consen  173 AGATLYAVSNVSEEFLVKNADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWDSA-IFLYLRFALTMFLLYSLAPILI  250 (336)
T ss_pred             ecceeeeeccccHHHHHhcCcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEeehHH-HHHHHHHHHHHHHHHHhhHHhe
Confidence            9999999999999999999999999999999999999876 6667767776666633 4445557779999999999999


Q ss_pred             hhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeeccccCC
Q 019439          254 KLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDL  309 (341)
Q Consensus       254 ~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~  309 (341)
                      |..+++..++..+++-.++.++  ..||-..+|...+..+.+..|.++|..+++.+
T Consensus       251 k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re~~~  304 (336)
T KOG2766|consen  251 KTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTREKDE  304 (336)
T ss_pred             ecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccccCc
Confidence            9999999999999999999998  55677799999999999999999996544433

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.96  E-value=3.9e-26  Score=206.99  Aligned_cols=262  Identities=16%  Similarity=0.169  Sum_probs=199.1

Q ss_pred             HHHHHHHHHHHhcCCCc-hHHHHHHHHHHHHHHHHHHHHHh--h-hh---hhHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 019439           34 ALMSFTSSLIADLGVDA-PVTQSAFAYFSLALVYGGVLLYR--R-QR---LRVAWYWYLLLGFVDVQGNFLVNKAYQFSS  106 (341)
Q Consensus        34 ~~~~~~~~~l~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~~--~-~~---~~~~~~~~~~~g~~~~~~~~~~~~al~~~~  106 (341)
                      ......+|.+.+  ..+ |+.++.+|++++.++...+...+  + ++   .+.+++..+..|+++...+...+.|+++++
T Consensus        62 ~~~~~~nK~vl~--~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~~~~~~~~~sl~~~s  139 (350)
T PTZ00343         62 VLYVVDNKLALN--MLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHLFVHFGAVISMGLGA  139 (350)
T ss_pred             HHHHHHHHHHHH--hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            334444454433  356 99999999999877654443221  1 11   234678889999999888777889999999


Q ss_pred             hhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCCCCCCCCCcchHHhHHHHHHHHHHHHHHHHH
Q 019439          107 ITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSRPLLGDVLVIAGTIFFATSNVGE  186 (341)
Q Consensus       107 ~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~  186 (341)
                      ++.++++.++.|+++++++++++|||++++++++++++++|+.+....+      .+....|++++++|++++++++++.
T Consensus       140 vs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~------~~~~~~G~~~~l~s~~~~a~~~i~~  213 (350)
T PTZ00343        140 VSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKE------LHFTWLAFWCAMLSNLGSSLRSIFA  213 (350)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheeccc------chhHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999987532      2335679999999999999999999


Q ss_pred             HHHhhcC-------CchhhhHHhHHHHHHHHHHHHHhcccccccc------ccccc--hHHHHHHHHHHHHHHHHHHHH-
Q 019439          187 EFFVKKK-------DRVEVVCMIGVYGLLVSAVQLSILELKSLES------VEWST--NILLGFAGYAASSFMFYTLAP-  250 (341)
Q Consensus       187 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~--~~~~~~~~~~~~~~~~~~~~~-  250 (341)
                      |+..++.       ++.+...++...+.++.++.....|......      .++..  .....+ ..+ .+...|.+++ 
T Consensus       214 k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~-~i~-~s~l~~~l~n~  291 (350)
T PTZ00343        214 KKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIF-KIF-FSGVWYYLYNE  291 (350)
T ss_pred             HHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHH-HHH-HHHHHHHHHHH
Confidence            9998654       3444555567777777754444344321110      01111  112222 222 3344456666 


Q ss_pred             ---HHHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeecc
Q 019439          251 ---FVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTT  305 (341)
Q Consensus       251 ---~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  305 (341)
                         .++++.++...++...++|+++++++++++||+++..+++|.++++.|+++|++.
T Consensus       292 ~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~  349 (350)
T PTZ00343        292 VAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF  349 (350)
T ss_pred             HHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence               5999999999999999999999999999999999999999999999999998764

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.94  E-value=7.8e-25  Score=193.51  Aligned_cols=267  Identities=16%  Similarity=0.092  Sum_probs=185.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHh-----hhhhhHHHHHHHHHHHH-HHHHHHH
Q 019439           24 FLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYR-----RQRLRVAWYWYLLLGFV-DVQGNFL   97 (341)
Q Consensus        24 ~~~~~~al~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~-----~~~~~~~~~~~~~~g~~-~~~~~~~   97 (341)
                      ++....+++++.....+|...++  .++  ..++++....+++.|+...+     ++..+++++.....+.+ ....+.+
T Consensus         4 ~~~~~aa~~~a~~~~~~k~~~~~--~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (281)
T TIGR03340         4 TLVVFSALMHAGWNLMAKSHADK--EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLG   79 (281)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCc--hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence            44555666666666665533322  233  34666666777777766543     22233444444444444 4444889


Q ss_pred             HHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCCCCCCCCCcchHHhHHHHHHHH
Q 019439           98 VNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSRPLLGDVLVIAGTI  177 (341)
Q Consensus        98 ~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~G~~~~l~a~~  177 (341)
                      ++.++++.+++.++++.++.|+++.+++++++|||+++++++|+.+++.|+.++..++.     ......|+.+++++++
T Consensus        80 ~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~-----~~~~~~g~~~~l~aal  154 (281)
T TIGR03340        80 LAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRF-----AQHRRKAYAWALAAAL  154 (281)
T ss_pred             HHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccc-----cccchhHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999876432     1223468889999999


Q ss_pred             HHHHHHHHHHHHhhcCCchhhhHHhHHHHHHHH----HHHHHhccccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 019439          178 FFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVS----AVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVL  253 (341)
Q Consensus       178 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (341)
                      +|++|.+..|+..++.++..........+.+..    .+.....+.......+ .......+.+.. .+...|.++++++
T Consensus       155 ~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~s~l~~~l~~~al  232 (281)
T TIGR03340       155 GTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPYA-RQILPSATLGGL-MIGGAYALVLWAM  232 (281)
T ss_pred             HHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccchhhhH-HHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence            999999998886554444322211111222111    1111111111111111 122334455554 5566789999999


Q ss_pred             hhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeee
Q 019439          254 KLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLII  301 (341)
Q Consensus       254 ~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l  301 (341)
                      ++.++..++...+++|+++.+++++++||+++..+++|+++++.|+++
T Consensus       233 ~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       233 TRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             hhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00688 rarD rarD protein

Probab=99.92  E-value=4.2e-22  Score=173.87  Aligned_cols=242  Identities=15%  Similarity=0.066  Sum_probs=173.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhh------hh----hHH-HHHHHHHHH
Q 019439           21 YLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQ------RL----RVA-WYWYLLLGF   89 (341)
Q Consensus        21 ~g~~~~~~~al~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~------~~----~~~-~~~~~~~g~   89 (341)
                      ||+++....+++++......+.+   +..+|.+++++|++++.+++.++...+++      +.    +++ +......|+
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~---~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL---KPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh---ccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence            37788888888888888888873   24799999999999998887766533221      11    111 223555666


Q ss_pred             HHHHHHHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCCCCCCCCCcchHHh
Q 019439           90 VDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSRPLLGD  169 (341)
Q Consensus        90 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~G~  169 (341)
                      +....+.+++.|++++++++++++.++.|+++++++++++|||++++++++++++++|+.++..++     .+ ..    
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~-----~~-~~----  148 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLK-----GS-LP----  148 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHc-----CC-ch----
Confidence            655558899999999999999999999999999999999999999999999999999999887542     11 11    


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCchhhhHHhHHHHHHHHHHHHHhccccccccccc-cchHHHHHHHHHHHHHHHHHH
Q 019439          170 VLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEW-STNILLGFAGYAASSFMFYTL  248 (341)
Q Consensus       170 ~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  248 (341)
                      .++++++++|+.|.+..|+..+ .+..+.... ...............+.......+. ..+.++.+.+..  +...|.+
T Consensus       149 ~~~l~aa~~~a~~~i~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~--t~i~~~l  224 (256)
T TIGR00688       149 WEALVLAFSFTAYGLIRKALKN-TDLAGFCLE-TLSLMPVAIYYLLQTDFATVQQTNPFPIWLLLVLAGLI--TGTPLLA  224 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCC-CCcchHHHH-HHHHHHHHHHHHHHhccCcccccCchhHHHHHHHHHHH--HHHHHHH
Confidence            3578899999999999999744 333222211 1111122211111111111111112 245555566654  4456899


Q ss_pred             HHHHHhhhhhhHHHhhhhhhHHHHHHHHHHH
Q 019439          249 APFVLKLSGATMFNLSLLTADMWAVVFRICF  279 (341)
Q Consensus       249 ~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~  279 (341)
                      +..++++.+++.++...+++|+++.+++.+.
T Consensus       225 ~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       225 FVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.92  E-value=3.9e-22  Score=177.25  Aligned_cols=277  Identities=22%  Similarity=0.287  Sum_probs=202.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhh---hhhhHHHHHHHHHHHHHHHH-H
Q 019439           20 LYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRR---QRLRVAWYWYLLLGFVDVQG-N   95 (341)
Q Consensus        20 ~~g~~~~~~~al~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~---~~~~~~~~~~~~~g~~~~~~-~   95 (341)
                      .++.....+.++.+.......+...+. ..++....+.|+....+...+...+++   ++.+.+++...+.+.+.... .
T Consensus         6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (292)
T COG0697           6 LLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPF   84 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHH
Confidence            334555555555555555555554432 456666677798888877444443332   11122234455566666555 7


Q ss_pred             HHHHHhhhccchhHHHHhhhchHHHHHHHHH-HHhhcccchhhHHHHHHHHHhhHHHhhcCCCCCCCCCcchHHhHHHHH
Q 019439           96 FLVNKAYQFSSITSVTLLDCCTIAWAIVLTW-LFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSRPLLGDVLVIA  174 (341)
Q Consensus        96 ~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~-l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~G~~~~l~  174 (341)
                      .+++.++++++++.++++.++.|+++.+++. +++|||++++++.++.++++|+.++..++..+.  .. ...|+.++++
T Consensus        85 ~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~--~~-~~~g~~~~l~  161 (292)
T COG0697          85 LLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGG--IL-SLLGLLLALA  161 (292)
T ss_pred             HHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcch--hH-HHHHHHHHHH
Confidence            8999999999999999999999999999997 667999999999999999999999998764211  01 5689999999


Q ss_pred             HHHHHHHHHHHHHHHhhcCCchhhhH-HhHHHHHHHHHHHHHhccccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 019439          175 GTIFFATSNVGEEFFVKKKDRVEVVC-MIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVL  253 (341)
Q Consensus       175 a~~~~a~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (341)
                      ++++++++.+..|+.. +.++..... +... .......+....+..  ...++..+....+.++. .+...+.++.+++
T Consensus       162 a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~-~~~i~~~~~~~~~  236 (292)
T COG0697         162 AALLWALYTALVKRLS-RLGPVTLALLLQLL-LALLLLLLFFLSGFG--APILSRAWLLLLYLGVF-STGLAYLLWYYAL  236 (292)
T ss_pred             HHHHHHHHHHHHHHhc-CCChHHHHHHHHHH-HHHHHHHHHHhcccc--ccCCHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence            9999999999999987 666655555 3333 222221122222222  22334455666666666 4445689999999


Q ss_pred             hhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeecc
Q 019439          254 KLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTT  305 (341)
Q Consensus       254 ~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  305 (341)
                      ++.++...+....++|+++.+++++++||+++..+++|+.+++.|+.+....
T Consensus       237 ~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         237 RLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            9999999999999999999999999999999999999999999999998765

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.88  E-value=5e-24  Score=175.55  Aligned_cols=256  Identities=18%  Similarity=0.294  Sum_probs=205.2

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHhhhhh---hHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhhhchHHHHHHH
Q 019439           48 VDAPVTQSAFAYFSLALVYGGVLLYRRQRL---RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVL  124 (341)
Q Consensus        48 ~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll  124 (341)
                      ..+|..+.-.|++.-.++..|..+.+++..   +...+.+++.|++++.+.++.|+|++|.+.+.+.++..++|+++.++
T Consensus        61 e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~if  140 (346)
T KOG4510|consen   61 ENDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIF  140 (346)
T ss_pred             ccChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHH
Confidence            456888888887777666666655554332   23345578889999999999999999999999999999999999999


Q ss_pred             HHHHhhcccchhhHHHHHHHHHhhHHHhhcCC--CC-----CCC-CCcchHHhHHHHHHHHHHHHHHHHHHHHhhcCCch
Q 019439          125 TWLFLGTRYSLWQLLGAALCVLGLGLVLLSDA--GG-----DGG-GSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRV  196 (341)
Q Consensus       125 ~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~--~~-----~~~-~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~  196 (341)
                      ++.++|||.++...++..+.+.|++++..++.  ++     ++. ...+..|...++.++++.|...++.|+..|+.+..
T Consensus       141 aw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h~~  220 (346)
T KOG4510|consen  141 AWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNAHAI  220 (346)
T ss_pred             HHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhccccEE
Confidence            99999999999999999999999999987764  11     111 24567889999999999999999999998999988


Q ss_pred             hhhHHhHHHHHHHHHHHHHhccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHhhhhhhHHHHHHHH
Q 019439          197 EVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFR  276 (341)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~  276 (341)
                      ....|..+.+++..++.......-.++. .+.+++..+.+|+  ..+.++++...+++...+--.++..+.+.++++++.
T Consensus       221 msvsyf~~i~lV~s~I~~~~ig~~~lP~-cgkdr~l~~~lGv--fgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wq  297 (346)
T KOG4510|consen  221 MSVSYFSLITLVVSLIGCASIGAVQLPH-CGKDRWLFVNLGV--FGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQ  297 (346)
T ss_pred             EEehHHHHHHHHHHHHHHhhccceecCc-cccceEEEEEehh--hhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHH
Confidence            8888888888888865544443323332 2444444444444  445567899999999888888999999999999999


Q ss_pred             HHHhccccchhhhhHHhhheeeeeeeeccc
Q 019439          277 ICFYHQKVDWLYFLAFGIVVIGLIIYSTTE  306 (341)
Q Consensus       277 ~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  306 (341)
                      +++|||.||++.++|+++++.+.+.....+
T Consensus       298 v~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k  327 (346)
T KOG4510|consen  298 VLFFGHWPTIWSWVGAVMVVSSTVWVALKK  327 (346)
T ss_pred             HHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence            999999999999999999998888765544

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.88  E-value=5.5e-20  Score=150.87  Aligned_cols=248  Identities=17%  Similarity=0.056  Sum_probs=198.4

Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhhhchHHHHHHHH
Q 019439           47 GVDAPVTQSAFAYFSLALVYGGVLLYRR-QRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLT  125 (341)
Q Consensus        47 ~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~  125 (341)
                      ....|...+.+|..++.+++..+....+ +..++++......|+.....|.+||.+++..|.+.+..+.++.|+.+++++
T Consensus        36 P~vG~~g~t~lRl~~aaLIll~l~RPwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~  115 (292)
T COG5006          36 PLVGAAGVTALRLAIAALILLALFRPWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLS  115 (292)
T ss_pred             cccChhhHHHHHHHHHHHHHHHHhhHHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHh
Confidence            4667899999999999999988876544 555677888899999999999999999999999999999999999988876


Q ss_pred             HHHhhcccchhhHHHHHHHHHhhHHHhhcCCCCCCCCCcchHHhHHHHHHHHHHHHHHHHHHHHhhcCCchhhhHHhHHH
Q 019439          126 WLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVY  205 (341)
Q Consensus       126 ~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~  205 (341)
                      .-      +.+..+.+.+++.|+.++...+..   ....+..|..+++.++.||+.|.+..||..+..+..+-+..-+.+
T Consensus       116 sR------r~~d~vwvaLAvlGi~lL~p~~~~---~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~a~gm~v  186 (292)
T COG5006         116 SR------RLRDFVWVALAVLGIWLLLPLGQS---VWSLDPVGVALALGAGACWALYIVLGQRAGRAEHGTAGVAVGMLV  186 (292)
T ss_pred             cc------chhhHHHHHHHHHHHHhheeccCC---cCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCCCchHHHHHHHH
Confidence            42      456667788889999888854432   344566999999999999999999999997777777777777788


Q ss_pred             HHHHHHHHHHhc-cccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhcccc
Q 019439          206 GLLVSAVQLSIL-ELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKV  284 (341)
Q Consensus       206 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~  284 (341)
                      +.++.+ |.... ..+.+  ++++-......+++. ++...|.+-..++++.+....++.+.+||.++.+.|++++||.+
T Consensus       187 Aaviv~-Pig~~~ag~~l--~~p~ll~laLgvavl-SSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~l  262 (292)
T COG5006         187 AALIVL-PIGAAQAGPAL--FSPSLLPLALGVAVL-SSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETL  262 (292)
T ss_pred             HHHHHh-hhhhhhcchhh--cChHHHHHHHHHHHH-hcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCC
Confidence            888775 44332 22222  223333333344554 88888999999999999999999999999999999999999999


Q ss_pred             chhhhhHHhhheeeeeeeecccc
Q 019439          285 DWLYFLAFGIVVIGLIIYSTTEK  307 (341)
Q Consensus       285 ~~~~~~G~~li~~g~~l~~~~~~  307 (341)
                      +..||+|++.|+.+..=.....+
T Consensus       263 s~~qwlaI~~ViaAsaG~~lt~~  285 (292)
T COG5006         263 TLIQWLAIAAVIAASAGSTLTAR  285 (292)
T ss_pred             CHHHHHHHHHHHHHHhccccccC
Confidence            99999999999876664444333

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.88  E-value=2.1e-20  Score=166.87  Aligned_cols=274  Identities=18%  Similarity=0.236  Sum_probs=212.2

Q ss_pred             HHHHHHHHHhcCCCc--hHHHHHHHHHHHHHHHHHHHHHhh--hhhhHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHH
Q 019439           36 MSFTSSLIADLGVDA--PVTQSAFAYFSLALVYGGVLLYRR--QRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVT  111 (341)
Q Consensus        36 ~~~~~~~l~~~~~~~--p~~~~~~r~~~~~l~l~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~  111 (341)
                      .+.....+.+.+...  |..+++.++....+.........+  +..+.+++.+...+++....+.+.+.|++|.|.+...
T Consensus        15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~   94 (303)
T PF08449_consen   15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQI   94 (303)
T ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHH
Confidence            344445554444444  999999999888877666555433  4556678889999999999999999999999999999


Q ss_pred             HhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCCCCCCC----CCcchHHhHHHHHHHHHHHHHHHHHH
Q 019439          112 LLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGG----GSRPLLGDVLVIAGTIFFATSNVGEE  187 (341)
Q Consensus       112 ~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~----~~~~~~G~~~~l~a~~~~a~~~v~~~  187 (341)
                      ++.+..|+++++++.+++|+|.+++++.++++..+|+.+....+..++..    ......|+.+.+.+.++.+...+++|
T Consensus        95 ~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe  174 (303)
T PF08449_consen   95 VFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQE  174 (303)
T ss_pred             HHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999876533211    11223499999999999999999999


Q ss_pred             HHhhc--CCchhhhHHhHHHHHHHHHHHHHhcc-c--ccccc-ccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHH
Q 019439          188 FFVKK--KDRVEVVCMIGVYGLLVSAVQLSILE-L--KSLES-VEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMF  261 (341)
Q Consensus       188 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  261 (341)
                      +..++  .++.+.+++...++.++..+...... .  .+..+ ....+......+....+............++.++...
T Consensus       175 ~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~  254 (303)
T PF08449_consen  175 KLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTT  254 (303)
T ss_pred             HHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhh
Confidence            99876  46678889999999888875555521 1  11111 1111112222222222334445666678899999999


Q ss_pred             HhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeeccccCC
Q 019439          262 NLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDL  309 (341)
Q Consensus       262 ~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~  309 (341)
                      +++..+..+++++++++++++++++.+++|.++++.|..++.+.++++
T Consensus       255 t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~  302 (303)
T PF08449_consen  255 TIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK  302 (303)
T ss_pred             hhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence            999999999999999999999999999999999999999998877665

; GO: 0055085 transmembrane transport

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.86  E-value=2e-19  Score=159.10  Aligned_cols=272  Identities=13%  Similarity=0.025  Sum_probs=190.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhhhh---hHHHHHHHHHHHHHHHHHHHH
Q 019439           22 LLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRL---RVAWYWYLLLGFVDVQGNFLV   98 (341)
Q Consensus        22 g~~~~~~~al~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~   98 (341)
                      ++++..+.+++++..+...+...  + .++.+..  |..++.+++..+....+++.   ++-+..-++.|.+...++.++
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~--g-~~~~~~~--~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~l~G~~w~ig~~~~   76 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG--G-GPYSQTL--GTTFGALILSIAIAIFVLPEFWALSIFLVGLLSGAFWALGQINQ   76 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC--C-CHHHHHH--HHHHHHHHHHHHHHHHhCCcccccHHHHHHHHHHHHHHhhhhhH
Confidence            35666667777777777776654  3 3333332  66666665554433322211   222344555566667778999


Q ss_pred             HHhhhccchhHHHHhhh-chHHHHHHHHHHHhhcccchhh----HHHHHHHHHhhHHHhhcCCCCCCCC--CcchHHhHH
Q 019439           99 NKAYQFSSITSVTLLDC-CTIAWAIVLTWLFLGTRYSLWQ----LLGAALCVLGLGLVLLSDAGGDGGG--SRPLLGDVL  171 (341)
Q Consensus        99 ~~al~~~~~~~~~~l~~-~~pi~~~ll~~l~l~e~~~~~~----~ig~~l~~~Gv~l~~~~~~~~~~~~--~~~~~G~~~  171 (341)
                      +.+.++++++.+.++.+ +.+++..+++.+++|||.++++    ++|++++++|++++...+..+...+  .+...|+.+
T Consensus        77 ~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~  156 (290)
T TIGR00776        77 FKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILL  156 (290)
T ss_pred             HHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHH
Confidence            99999999999998887 8999999999999999999999    9999999999999876543211101  233689999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchhhhHHhHHHHHHHHHHHHHhccccccccccccchHHHHHHHHHHHHHHHHHHHHH
Q 019439          172 VIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPF  251 (341)
Q Consensus       172 ~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (341)
                      +++++++|+.|.+..|+.  +.||.+..+.+...-.+...+....+...  ++...+........|+. . ..+|.++..
T Consensus       157 ~l~sg~~y~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~Gi~-~-~ia~~~y~~  230 (290)
T TIGR00776       157 LLMSTIGYLVYVVVAKAF--GVDGLSVLLPQAIGMVIGGIIFNLGHILA--KPLKKYAILLNILPGLM-W-GIGNFFYLF  230 (290)
T ss_pred             HHHHHHHHHHHHHHHHHc--CCCcceehhHHHHHHHHHHHHHHHHHhcc--cchHHHHHHHHHHHHHH-H-HHHHHHHHH
Confidence            999999999999999975  47888875544442222221111111100  11111122222224444 3 556788888


Q ss_pred             HHh-hhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhh----hHHhhheeeeeeeec
Q 019439          252 VLK-LSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYF----LAFGIVVIGLIIYST  304 (341)
Q Consensus       252 ~~~-~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~----~G~~li~~g~~l~~~  304 (341)
                      +.+ +.+++.++.....+|+.+.+++++++||+.+..++    +|.++++.|+++...
T Consensus       231 ~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       231 SAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            999 89999999999999999999999999999999999    999999999887643

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.84  E-value=3e-18  Score=144.51  Aligned_cols=273  Identities=16%  Similarity=0.109  Sum_probs=205.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHH--hhhhh------hHHHHHHHHHHH
Q 019439           18 RTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLY--RRQRL------RVAWYWYLLLGF   89 (341)
Q Consensus        18 ~~~~g~~~~~~~al~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~--~~~~~------~~~~~~~~~~g~   89 (341)
                      ...+|++++....++++..-...+.+.   ..++..+...|.+.+...+......  +++..      ++.+....+.++
T Consensus         4 ~~~~Gil~~l~Ay~lwG~lp~y~kll~---~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~   80 (293)
T COG2962           4 DSRKGILLALLAYLLWGLLPLYFKLLE---PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTAL   80 (293)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHH
Confidence            345699999988888888877777774   4678899999998887766554432  22211      122333444454


Q ss_pred             HHHHHHHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCCCCCCCCCcchHHh
Q 019439           90 VDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSRPLLGD  169 (341)
Q Consensus        90 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~G~  169 (341)
                      +.......|..|..+..+-+++.-++..|++.++++.+++|||+++.|+++++++.+||...+..      .++.++   
T Consensus        81 li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~------~g~lpw---  151 (293)
T COG2962          81 LIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL------LGSLPW---  151 (293)
T ss_pred             HHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH------cCCCcH---
Confidence            44444669999999999999999999999999999999999999999999999999999999986      344453   


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCchhhhHHhHHHHHHHHHHHHHhccccc--cccccccchHHHHHHHHHHHHHHHHH
Q 019439          170 VLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKS--LESVEWSTNILLGFAGYAASSFMFYT  247 (341)
Q Consensus       170 ~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (341)
                       .++.-++.|+.|...-|+.  +.|+.+-.......-.+..+......+.+.  ....+...+..+...|.+  +.....
T Consensus       152 -val~la~sf~~Ygl~RK~~--~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~v--TavpL~  226 (293)
T COG2962         152 -VALALALSFGLYGLLRKKL--KVDALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLV--TAVPLL  226 (293)
T ss_pred             -HHHHHHHHHHHHHHHHHhc--CCchHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHH--HHHHHH
Confidence             4555588999999987663  567777666666666666654444333322  121223334444444443  444468


Q ss_pred             HHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeecccc
Q 019439          248 LAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEK  307 (341)
Q Consensus       248 ~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  307 (341)
                      ++..+-++.+-++.++..+++|..-.+++++++||+++..++...+.|-+|++++..+.-
T Consensus       227 lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l  286 (293)
T COG2962         227 LFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGL  286 (293)
T ss_pred             HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            889999999999999999999999999999999999999999999999999999986543

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.80  E-value=1.3e-18  Score=150.64  Aligned_cols=228  Identities=21%  Similarity=0.278  Sum_probs=180.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCCC--CC
Q 019439           82 YWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAG--GD  159 (341)
Q Consensus        82 ~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~~--~~  159 (341)
                      +..+..+.+.+..+++++.|+++++++..+++.+++.+|+..++.++.+||+++.+.+++.+.+.|++++...+..  ++
T Consensus       160 k~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~  239 (416)
T KOG2765|consen  160 KLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSD  239 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccccc
Confidence            4456677888888999999999999999999999999999999999999999999999999999999999987652  22


Q ss_pred             CCCCcchHHhHHHHHHHHHHHHHHHHHHHHhhcCC-ch---hhhHHhHHHHHHHHHHHHHhccccccccc---cccchHH
Q 019439          160 GGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKD-RV---EVVCMIGVYGLLVSAVQLSILELKSLESV---EWSTNIL  232 (341)
Q Consensus       160 ~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  232 (341)
                      ........|.++++++|+.||+|.++.||...+++ ..   .+..+.+++..+...++..+.+....+.+   +-.....
T Consensus       240 ~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~  319 (416)
T KOG2765|consen  240 LPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSL  319 (416)
T ss_pred             CCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEe
Confidence            34556689999999999999999999999876652 33   34445555665555544444332222221   1122333


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeeccccCCC
Q 019439          233 LGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLN  310 (341)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~  310 (341)
                      +++.+.. .++..-.+|.++.-..++.++.+.+.++...+++.+.++-|..+++.+++|.+.|+.|.+..++..+...
T Consensus       320 vv~~~li-gtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~~~~  396 (416)
T KOG2765|consen  320 VVFNNLI-GTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSENSK  396 (416)
T ss_pred             eeHhhHH-HHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccccccc
Confidence            4444444 5556678899999999999999988888889999999999999999999999999999999998665443

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.78  E-value=3.2e-19  Score=155.93  Aligned_cols=258  Identities=16%  Similarity=0.247  Sum_probs=211.3

Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhhhchHHHH
Q 019439           47 GVDAPVTQSAFAYFSLALVYGGVLLYRRQR-----LRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWA  121 (341)
Q Consensus        47 ~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~  121 (341)
                      ++.-|+.++..++..+.+.+......+..+     .+..++..+..|+....++++.+.|+.+.+++.++++..++|+++
T Consensus        44 ~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~t  123 (316)
T KOG1441|consen   44 GFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFT  123 (316)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhH
Confidence            666799999998887777766665544322     234688899999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCCCCCCCCCcchHHhHHHHHHHHHHHHHHHHHHHHhh----cCCchh
Q 019439          122 IVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVK----KKDRVE  197 (341)
Q Consensus       122 ~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~----~~~~~~  197 (341)
                      ++++.++.+|+.++..+..++....|+.+....      +...+..|...++.+.+..+..+++.|+.++    +.|+.+
T Consensus       124 vl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~------e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~  197 (316)
T KOG1441|consen  124 VLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVT------ELSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMN  197 (316)
T ss_pred             HHHHHHHhCCCCcceEEEEEEEeeeeEEEeeec------cccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchH
Confidence            999999999999999999999999999999885      4556779999999999999999999999984    278999


Q ss_pred             hhHHhHHHHHHHHHHHHHhcc-cccc---ccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHhhhhhhHHHHH
Q 019439          198 VVCMIGVYGLLVSAVQLSILE-LKSL---ESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAV  273 (341)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~  273 (341)
                      .+.++...+.+..++|+.... +...   ...+|........+.. .+.+..+...+..+.+++|.+.++.+...-++.+
T Consensus       198 ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi  276 (316)
T KOG1441|consen  198 LLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVI  276 (316)
T ss_pred             HHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEE
Confidence            999999999888875554433 3222   2223333322222222 3666667888889999999999999999988899


Q ss_pred             HHHHHHhccccchhhhhHHhhheeeeeeeeccccCCCC
Q 019439          274 VFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLNP  311 (341)
Q Consensus       274 l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~  311 (341)
                      +.++++|+|+.++.+..|+++.++|+++|++.+.++++
T Consensus       277 ~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~  314 (316)
T KOG1441|consen  277 VVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK  314 (316)
T ss_pred             EeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence            99999999999999999999999999999987765543

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.77  E-value=2.8e-15  Score=130.30  Aligned_cols=275  Identities=15%  Similarity=0.145  Sum_probs=198.9

Q ss_pred             HHHHHHHHHHHHHHhcC--CCchHHHHHHHHHHHHHHHHHHHHHhh----hh-----------hhHHHHHHHHHHHHHHH
Q 019439           31 FTLALMSFTSSLIADLG--VDAPVTQSAFAYFSLALVYGGVLLYRR----QR-----------LRVAWYWYLLLGFVDVQ   93 (341)
Q Consensus        31 l~~~~~~~~~~~l~~~~--~~~p~~~~~~r~~~~~l~l~~~~~~~~----~~-----------~~~~~~~~~~~g~~~~~   93 (341)
                      ...++.....++..+.+  ...|...++.--.+-.++....++++.    ++           .+++..+..+.+++...
T Consensus        25 ~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iYal  104 (345)
T KOG2234|consen   25 AQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALIYAL  104 (345)
T ss_pred             HHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHHHH
Confidence            33455555555554433  344666666555555555444444331    11           12345677888888888


Q ss_pred             HHHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCC---CC--CCCCCcchHH
Q 019439           94 GNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDA---GG--DGGGSRPLLG  168 (341)
Q Consensus        94 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~---~~--~~~~~~~~~G  168 (341)
                      .|.++|.++.+.+++..++..++..+.|++++.++++||++++||.++++.++|+.++..+..   +.  +....++..|
T Consensus       105 qNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~~G  184 (345)
T KOG2234|consen  105 QNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPFLG  184 (345)
T ss_pred             hhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchhhh
Confidence            888999999999999999999999999999999999999999999999999999999993322   11  1345567899


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcC--CchhhhHHhHHHHHHHHHHHHHhccccccc--c--ccccchHHHHHHHHHHHH
Q 019439          169 DVLVIAGTIFFATSNVGEEFFVKKK--DRVEVVCMIGVYGLLVSAVQLSILELKSLE--S--VEWSTNILLGFAGYAASS  242 (341)
Q Consensus       169 ~~~~l~a~~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~  242 (341)
                      ....+.++..-++..++.++.+|+-  +........+..|.++.++..+..+.....  .  ..|....+...+.-+.. 
T Consensus       185 ~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~vVl~~a~g-  263 (345)
T KOG2234|consen  185 LVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWLVVLLNAVG-  263 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHHHHHHHHhcc-
Confidence            9999999999999999999999763  444455677788888887555555443331  1  12333333333322222 


Q ss_pred             HHHHHHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeeccccCC
Q 019439          243 FMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDL  309 (341)
Q Consensus       243 ~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~  309 (341)
                         -++....+++.+...-.....+..+++.+.++.+++-.||....+|..+++.++.+|...+.+.
T Consensus       264 ---GLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~  327 (345)
T KOG2234|consen  264 ---GLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPARD  327 (345)
T ss_pred             ---chhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc
Confidence               2555567777777777777767778999999999999999999999999999999999555543

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.73  E-value=1.8e-15  Score=129.60  Aligned_cols=215  Identities=18%  Similarity=0.181  Sum_probs=169.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCC
Q 019439           77 LRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDA  156 (341)
Q Consensus        77 ~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~  156 (341)
                      .+++..++.+.+++....|.+.+.++++.+++..+++.++..++|++++.+++|+|++++||+++++.++|+.++..++.
T Consensus        13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence            34556788999999999999999999999999999999999999999999999999999999999999999999987665


Q ss_pred             CCC----C-------CCCcchHHhHHHHHHHHHHHHHHHHHHHHhhcC--CchhhhHHhHHHHHHHHHHHHHhccccccc
Q 019439          157 GGD----G-------GGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKK--DRVEVVCMIGVYGLLVSAVQLSILELKSLE  223 (341)
Q Consensus       157 ~~~----~-------~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (341)
                      .+.    .       ...+...|+...+.++++.++..++.||..|+.  +........+..+.++.++.....++....
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~  172 (244)
T PF04142_consen   93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAIS  172 (244)
T ss_pred             cccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence            321    0       123457899999999999999999999999885  444455677788888876554444433222


Q ss_pred             cc----cccchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhh
Q 019439          224 SV----EWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIV  295 (341)
Q Consensus       224 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li  295 (341)
                      +.    .|..+.+   ..+....+++ ++....+|+.+...-+.....+.+++.+.++++|+.+++....+|..++
T Consensus       173 ~~g~f~G~~~~~~---~~i~~~a~gG-llva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  173 ESGFFHGYSWWVW---IVIFLQAIGG-LLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV  244 (244)
T ss_pred             cCCchhhcchHHH---HHHHHHHHhh-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence            21    2233222   2222233332 6667789999999888888888899999999999999999999998764

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.68  E-value=1.7e-15  Score=126.32  Aligned_cols=257  Identities=24%  Similarity=0.316  Sum_probs=193.5

Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHhhhhh-----------------hHHHHHHHHHHHHHHHHHHHHHHhhhccchhH
Q 019439           47 GVDAPVTQSAFAYFSLALVYGGVLLYRRQRL-----------------RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITS  109 (341)
Q Consensus        47 ~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~-----------------~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~  109 (341)
                      +..+|+.++...|+.-++++..+.+.|.+..                 +-+...++..+++...+..++|.++.+++++.
T Consensus        35 gfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal~Di~gsslm~vgL~lTsASs  114 (372)
T KOG3912|consen   35 GFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPALCDIAGSSLMYVGLNLTSASS  114 (372)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecChHHHHHhhhHHHHHHHHHhhHHH
Confidence            4667999999889888888888877654211                 11134456689999999999999999999999


Q ss_pred             HHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCCCC---C-CCCCcchHHhHHHHHHHHHHHHHHHH
Q 019439          110 VTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGG---D-GGGSRPLLGDVLVIAGTIFFATSNVG  185 (341)
Q Consensus       110 ~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~~~---~-~~~~~~~~G~~~~l~a~~~~a~~~v~  185 (341)
                      .++++....+|+.+++.-+++++++.+||+|+....+|++.+...|...   . .+.++...|+++.+.+-+.-|...++
T Consensus       115 fQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~iitGdllIiiaqiivaiQ~v~  194 (372)
T KOG3912|consen  115 FQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSIITGDLLIIIAQIIVAIQMVC  194 (372)
T ss_pred             HHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccchhhhHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999988765421   1 23456789999999999999999999


Q ss_pred             HHHHhhc--CCchhhhHHhHHHHHHHHHHHHHhc---c-cccc---cc---cccc---------chHHHHHHHHHHHHHH
Q 019439          186 EEFFVKK--KDRVEVVCMIGVYGLLVSAVQLSIL---E-LKSL---ES---VEWS---------TNILLGFAGYAASSFM  244 (341)
Q Consensus       186 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~---~~---~~~~---------~~~~~~~~~~~~~~~~  244 (341)
                      .+|..++  .+|.+...+.++.|.++..+.....   . +...   +.   .||.         ....+...+.. .++.
T Consensus       195 Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~-vSiA  273 (372)
T KOG3912|consen  195 EEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFT-VSIA  273 (372)
T ss_pred             HHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhh-hhee
Confidence            9999876  6889999999999966654333221   1 1011   00   1222         12233444444 3333


Q ss_pred             HHHHHHH-HHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeec
Q 019439          245 FYTLAPF-VLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYST  304 (341)
Q Consensus       245 ~~~~~~~-~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  304 (341)
                      +|-+.-. ..+..+++.-.+.-.+...+-.++++.+..|.....|+.|.++.+.|+++|+-
T Consensus       274 ffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~~  334 (372)
T KOG3912|consen  274 FFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYNQ  334 (372)
T ss_pred             eeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3333333 34447777777777777777788888899999999999999999999999973

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.60  E-value=8.8e-13  Score=113.21  Aligned_cols=286  Identities=14%  Similarity=0.076  Sum_probs=206.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-hcCCCchHHHHHHHHHHHHHHHHHHHHHhh---hh-hhHHHHHHHHHHHHHHHHH
Q 019439           21 YLLFLGQLVSFTLALMSFTSSLIA-DLGVDAPVTQSAFAYFSLALVYGGVLLYRR---QR-LRVAWYWYLLLGFVDVQGN   95 (341)
Q Consensus        21 ~g~~~~~~~al~~~~~~~~~~~l~-~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~---~~-~~~~~~~~~~~g~~~~~~~   95 (341)
                      +.+.-+..-++..+......++.. ++++.........+.+.+.+.+......+-   ++ .++..+++....++.....
T Consensus        12 ~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i   91 (314)
T KOG1444|consen   12 SPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGML   91 (314)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHH
Confidence            346666666666677777777664 345544455555788777766665543332   22 2444677777888888878


Q ss_pred             HHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCCCCCCCCCcchHHhHHHHHH
Q 019439           96 FLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSRPLLGDVLVIAG  175 (341)
Q Consensus        96 ~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~G~~~~l~a  175 (341)
                      +.-..+++|.++...+++....|+++++...+++|.|++...|.++....+|.......+      ......|+.+.+..
T Consensus        92 ~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d------~sf~~~gY~w~~~n  165 (314)
T KOG1444|consen   92 FTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTD------LSFNLRGYSWALAN  165 (314)
T ss_pred             HHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcccc------ceecchhHHHHHHH
Confidence            888999999999999999999999999999999999999999999999999988887654      33344699999999


Q ss_pred             HHHHHHHHHHHHHHhhc--CCchhhhHHhHHHHHHHHHHHHHhccccc---cccccccch-HHHHHHHHHHHHHHHHHHH
Q 019439          176 TIFFATSNVGEEFFVKK--KDRVEVVCMIGVYGLLVSAVQLSILELKS---LESVEWSTN-ILLGFAGYAASSFMFYTLA  249 (341)
Q Consensus       176 ~~~~a~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  249 (341)
                      .+.-+.+.+..|+-.+.  .+....+++..+...+...+...+.+..+   ....+|... ........++..++...+-
T Consensus       166 ~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s  245 (314)
T KOG1444|consen  166 CLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYTS  245 (314)
T ss_pred             HHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHHH
Confidence            99999999999998655  56677888888888888866555554322   111112211 1122212222233333444


Q ss_pred             HHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeeccccCCCCC
Q 019439          250 PFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLNPM  312 (341)
Q Consensus       250 ~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~~  312 (341)
                      .+..+..+++..++++......+.+.+.+++|++.++...+|..+-++|-++|++...++++.
T Consensus       246 ~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~  308 (314)
T KOG1444|consen  246 FLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQ  308 (314)
T ss_pred             HHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccC
Confidence            567778888888888876766677777777788899999999999999999999887655444

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.59  E-value=1.6e-13  Score=116.20  Aligned_cols=252  Identities=10%  Similarity=0.130  Sum_probs=179.9

Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHH-hhhhh-------hHH-HHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhhhch
Q 019439           47 GVDAPVTQSAFAYFSLALVYGGVLLY-RRQRL-------RVA-WYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCT  117 (341)
Q Consensus        47 ~~~~p~~~~~~r~~~~~l~l~~~~~~-~~~~~-------~~~-~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~  117 (341)
                      .+.-|...+..+.+...+........ +.+.+       +.+ .++....|++...-..+-+.+++|++.+.+++..+.+
T Consensus        41 ~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSs  120 (349)
T KOG1443|consen   41 NFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSS  120 (349)
T ss_pred             CcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccH
Confidence            34448888888877666554433322 21111       122 2233344444433366889999999999999999999


Q ss_pred             HHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCCCCCCCCCcchHHhHHHHHHHHHHHHHHHHHHHHhhc-----
Q 019439          118 IAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKK-----  192 (341)
Q Consensus       118 pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~-----  192 (341)
                      ++|+.+++.++.=||+++.-..-+.++.+|+++++..+      .+....|..+...++++-++...+.++.+++     
T Consensus       121 i~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks------Tqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~  194 (349)
T KOG1443|consen  121 ILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS------TQFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAK  194 (349)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc------cceeehhHHHHHHHHHhhhhhHHHHHHHHhcCcccc
Confidence            99999999999999999999999999999999999863      3456689999999999888888888888766     


Q ss_pred             CCchhhhHHhHHHHHHHHHHHHHhccccccc-------ccccc-chHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhHHHh
Q 019439          193 KDRVEVVCMIGVYGLLVSAVQLSILELKSLE-------SVEWS-TNILLGFAGY-AASSFMFYTLAPFVLKLSGATMFNL  263 (341)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~~~  263 (341)
                      .+|............+..++....+|+....       ..+.. .+.....++. +..++.--.+-+....+++....++
T Consensus       195 ~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSI  274 (349)
T KOG1443|consen  195 RNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSI  274 (349)
T ss_pred             CCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeH
Confidence            3577777777777777776566666654321       11111 1111222111 1122222233444666788888899


Q ss_pred             hhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeec
Q 019439          264 SLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYST  304 (341)
Q Consensus       264 ~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  304 (341)
                      .+...-+.+.+++.++.+|.++...++|..+...|+.++..
T Consensus       275 aGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~  315 (349)
T KOG1443|consen  275 AGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN  315 (349)
T ss_pred             HHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence            88888899999999999999999999999999999999843

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.58  E-value=1.8e-13  Score=113.79  Aligned_cols=256  Identities=15%  Similarity=0.166  Sum_probs=198.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHH-HhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHh
Q 019439           51 PVTQSAFAYFSLALVYGGVLL-YRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFL  129 (341)
Q Consensus        51 p~~~~~~r~~~~~l~l~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l  129 (341)
                      -|.+++.+++.-..+.+..+. .+.+++..+|+.+..++++....+.+-+.++.|.+-....+..++..+-+++.+.++-
T Consensus        75 GWylTlvQf~~Ysg~glie~~~~~~k~r~iP~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIq  154 (367)
T KOG1582|consen   75 GWYLTLVQFLVYSGFGLIELQLIQTKRRVIPWRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQ  154 (367)
T ss_pred             chHHHHHHHHHHHhhhheEEEeecccceecchhHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeec
Confidence            577888777666554443322 3334555678888888888877788999999999999999999999999999999999


Q ss_pred             hcccchhhHHHHHHHHHhhHHHhhcCCCCCCCCCcchHHhHHHHHHHHHHHHHHHHHHHHhhc--CCchhhhHHhHHHHH
Q 019439          130 GTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKK--KDRVEVVCMIGVYGL  207 (341)
Q Consensus       130 ~e~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~--~~~~~~~~~~~~~~~  207 (341)
                      +.|.+....++..+..+|+.+.+..|+.  ...+....|+.+.-+|-++.|+-...+++.++.  .+..++.++....|.
T Consensus       155 GkRY~v~d~~aA~lm~lGli~FTLADs~--~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~  232 (367)
T KOG1582|consen  155 GKRYGVHDYIAAMLMSLGLIWFTLADSQ--TSPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGF  232 (367)
T ss_pred             cccccHHHHHHHHHHHHHHHhhhhcccc--cCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccH
Confidence            9999999999999999999999998765  245566789999999999999988888888776  456778889889998


Q ss_pred             HHHHHHHHhccc-----cccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhcc
Q 019439          208 LVSAVQLSILEL-----KSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQ  282 (341)
Q Consensus       208 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e  282 (341)
                      ++.+.+......     ....+.+|.......+...  +++.........++..++.++..+....-.+++++++++|..
T Consensus       233 vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~--~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsK  310 (367)
T KOG1582|consen  233 VFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL--AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSK  310 (367)
T ss_pred             HHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH--HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcC
Confidence            888766554322     1111223333333333333  333334555567777899998888888999999999999999


Q ss_pred             ccchhhhhHHhhheeeeeeeeccccCCC
Q 019439          283 KVDWLYFLAFGIVVIGLIIYSTTEKDLN  310 (341)
Q Consensus       283 ~~~~~~~~G~~li~~g~~l~~~~~~~~~  310 (341)
                      ++|....-|..+++.|+.+-.++++.+.
T Consensus       311 PfT~qy~~~gllv~lgI~Ln~ysk~nk~  338 (367)
T KOG1582|consen  311 PFTEQYVWSGLLVVLGIYLNMYSKRNKI  338 (367)
T ss_pred             chHHHHhhhhHHHHHHHHhhcccCCCCC
Confidence            9999999999999999999888775443

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.58  E-value=5.3e-13  Score=113.09  Aligned_cols=258  Identities=16%  Similarity=0.210  Sum_probs=204.6

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHhh--hhhhHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhhhchHHHHHHHH
Q 019439           48 VDAPVTQSAFAYFSLALVYGGVLLYRR--QRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLT  125 (341)
Q Consensus        48 ~~~p~~~~~~r~~~~~l~l~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~  125 (341)
                      +.+|..+++.+-+.+.++-..+...++  ...+.+|+.+...++.......+.+.|++|.+-....+-.+...+-+++++
T Consensus        48 F~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg  127 (327)
T KOG1581|consen   48 FEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMG  127 (327)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHH
Confidence            445778888887777776654443333  234566889999999999999999999999999999999999999999999


Q ss_pred             HHHhhcccchhhHHHHHHHHHhhHHHhhcCCCC---CCCCCcchHHhHHHHHHHHHHHHHHHHHHHHhhc--CCchhhhH
Q 019439          126 WLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGG---DGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKK--KDRVEVVC  200 (341)
Q Consensus       126 ~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~~~---~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~--~~~~~~~~  200 (341)
                      .++.|+|.+..+.+...+..+|+.+....++.+   +....+...|+.+....-++.++.+..++++.++  .++..+++
T Consensus       128 ~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~  207 (327)
T KOG1581|consen  128 TLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMF  207 (327)
T ss_pred             HHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHH
Confidence            999999999999999999999999988765533   2344567899999999999999999999999876  57788999


Q ss_pred             HhHHHHHHHHHHHHHhcccccccc-----ccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHhhhhhhHHHHHHH
Q 019439          201 MIGVYGLLVSAVQLSILELKSLES-----VEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVF  275 (341)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~  275 (341)
                      +..++.++..... .+.++...+.     .+...+.-+.....+  ....+.+.++.+++.++.+...++.+.-.+++++
T Consensus       208 ~vNLf~~i~~~~~-li~qg~~~~av~F~~~hp~~~~Di~l~s~~--gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~l  284 (327)
T KOG1581|consen  208 GVNLFSAILNGTY-LILQGHLLPAVSFIKEHPDVAFDILLYSTC--GAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIML  284 (327)
T ss_pred             HHHHHHHHHHHHh-hhcCCCCchHHHHHHcChhHHHHHHHHHHh--hhhhhheehhhHhhcccHHHHHHHHHHHHHHHHH
Confidence            9999999998644 3333322211     222333333444443  3333677788999999999999999999999999


Q ss_pred             HHHHhccccchhhhhHHhhheeeeeeeeccccC
Q 019439          276 RICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKD  308 (341)
Q Consensus       276 ~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~  308 (341)
                      +.+++|++++..|++|..+++.|+.+-.+-+++
T Consensus       285 S~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~  317 (327)
T KOG1581|consen  285 SCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK  317 (327)
T ss_pred             HHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence            999999999999999999999998876655544

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.54  E-value=2.3e-13  Score=110.87  Aligned_cols=230  Identities=12%  Similarity=0.120  Sum_probs=178.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCC
Q 019439           77 LRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDA  156 (341)
Q Consensus        77 ~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~  156 (341)
                      .+.+.+.+...+.-.......-+.|++|.|-....+-.+..|+-+++++.++.+++.+|++...++++++|+.+..+.++
T Consensus        81 D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~  160 (337)
T KOG1580|consen   81 DNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKEN  160 (337)
T ss_pred             cCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcccc
Confidence            34456667777766666688899999999999999999999999999999999999999999999999999999998755


Q ss_pred             C-CCCCCCcchHHhHHHHHHHHHHHHHHHHHHHHhhcC--CchhhhHHhHHHHHHHHHHHHHhccccccccc---cccch
Q 019439          157 G-GDGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKK--DRVEVVCMIGVYGLLVSAVQLSILELKSLESV---EWSTN  230 (341)
Q Consensus       157 ~-~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  230 (341)
                      . ....+.....|-++.+++-...+.....+++..+.+  ....++++..+++.+...... .+.++.++-+   .-.+.
T Consensus       161 Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~-lfTGElweF~yF~~RhP~  239 (337)
T KOG1580|consen  161 KVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGL-LFTGELWEFFYFVQRHPY  239 (337)
T ss_pred             ccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhh-eehhhHHHHHHHHHhccH
Confidence            2 112344566899999999999999999998886654  456678888888888876333 3332221110   01122


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeecccc
Q 019439          231 ILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEK  307 (341)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  307 (341)
                      .+.=+..++++++..+.+.+......++..-+++..+.-.++++.++++++.+++.+||+|.++++.+...=....+
T Consensus       240 ~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK  316 (337)
T KOG1580|consen  240 VFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGK  316 (337)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCC
Confidence            22222334445666678888899999999999999999999999999999999999999999999988776544433

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.51  E-value=6.3e-12  Score=107.36  Aligned_cols=244  Identities=14%  Similarity=0.085  Sum_probs=170.2

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHhhhhhh---HHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhh-hchHHHHHHHH
Q 019439           50 APVTQSAFAYFSLALVYGGVLLYRRQRLR---VAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLD-CCTIAWAIVLT  125 (341)
Q Consensus        50 ~p~~~~~~r~~~~~l~l~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~~~ll~  125 (341)
                      +|....+.-.+.+.++-+.....+++...   ..+..-++.|++...++...+.|+++.++|.+.++. .++.+.+.+++
T Consensus        11 ~~~~Q~lG~t~Gali~alv~~~~~~p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~g   90 (269)
T PF06800_consen   11 KPANQILGTTIGALIFALVVFLFRQPAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIG   90 (269)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHH
Confidence            46666654444444443343444444332   557778889999999999999999999999999886 77777799999


Q ss_pred             HHHhhcccchhhH----HHHHHHHHhhHHHhhcCCCCC--CCCCcchHHhHHHHHHHHHHHHHHHHHHHHhhcCCchhhh
Q 019439          126 WLFLGTRYSLWQL----LGAALCVLGLGLVLLSDAGGD--GGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVV  199 (341)
Q Consensus       126 ~l~l~e~~~~~~~----ig~~l~~~Gv~l~~~~~~~~~--~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~  199 (341)
                      .++++|.-+..++    +++++.++|+.+....+..++  +...+...|+...+.+.+.|..|.+..|.  .+.++....
T Consensus        91 v~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~--~~~~~~~~~  168 (269)
T PF06800_consen   91 VLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA--FHVSGWSAF  168 (269)
T ss_pred             HhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh--cCCChhHhH
Confidence            9999998886665    488899999999988776543  12445668999999999999999999776  457777766


Q ss_pred             HHhHHHHHHHHHHHHHhccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHH
Q 019439          200 CMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICF  279 (341)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~  279 (341)
                      +-+.+.-.+...+.....+....++..|......+.-+++      ..++..+.+..+.+++=....+.++++.+.|+++
T Consensus       169 lPqaiGm~i~a~i~~~~~~~~~~~k~~~~nil~G~~w~ig------nl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~i  242 (269)
T PF06800_consen  169 LPQAIGMLIGAFIFNLFSKKPFFEKKSWKNILTGLIWGIG------NLFYLISAQKNGVATAFTLSQLGVVISTLGGIFI  242 (269)
T ss_pred             HHHHHHHHHHHHHHhhcccccccccchHHhhHHHHHHHHH------HHHHHHhHHhccchhhhhHHhHHHHHHHhhhheE
Confidence            6554444333332222222222222233333322222332      4556667778777777677777889999999999


Q ss_pred             hccccchh----hhhHHhhheeeeee
Q 019439          280 YHQKVDWL----YFLAFGIVVIGLII  301 (341)
Q Consensus       280 ~~e~~~~~----~~~G~~li~~g~~l  301 (341)
                      +||+=+..    .++|.++++.|.++
T Consensus       243 l~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  243 LKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             EEecCchhhHHHHHHHHHHHHHhhhc
Confidence            99987764    55688888887664

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.46  E-value=6.7e-13  Score=97.91  Aligned_cols=128  Identities=23%  Similarity=0.276  Sum_probs=105.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhhh------hhHHHHHHHHHHHHHHHHHH
Q 019439           23 LFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR------LRVAWYWYLLLGFVDVQGNF   96 (341)
Q Consensus        23 ~~~~~~~al~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~   96 (341)
                      +++++..|+..+....+.+.-.+  ..+|...++.|.......+..++...++.      .++.|...++.|+.+.....
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~--~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl   82 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLE--GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWL   82 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcc--ccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHH
Confidence            55666677777767777666543  67899999999988888877777655432      35567777788877777788


Q ss_pred             HHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHh
Q 019439           97 LVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVL  152 (341)
Q Consensus        97 ~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~  152 (341)
                      +||+|++..+++.+.++..++|+++++++++++|||++..+|+|++++.+|++++.
T Consensus        83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            99999999999999999999999999999999999999999999999999998764

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.37  E-value=1.2e-11  Score=91.30  Aligned_cols=135  Identities=15%  Similarity=0.110  Sum_probs=108.3

Q ss_pred             HhHHHHHHHHHHHHHHHHHHHHhhcCCchhhhHHhHHHHHHHHHHHHHhcccc-ccccccccchHHHHHHHHHHHHHHHH
Q 019439          168 GDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELK-SLESVEWSTNILLGFAGYAASSFMFY  246 (341)
Q Consensus       168 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (341)
                      ...+++++++++++..++.|.-.++.||...+....+....+........... .....+.+.+..+.+-|+  ++....
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGl--a~glsw   81 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGL--AGGLSW   81 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHH--HHHHHH
Confidence            46899999999999999999999999999988888888777775444443332 222234455665555554  444557


Q ss_pred             HHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeec
Q 019439          247 TLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYST  304 (341)
Q Consensus       247 ~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  304 (341)
                      .+|+++++...++.+....-++|+++++++++++||+++..+++|+++|++|.++..+
T Consensus        82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            9999999998888887777789999999999999999999999999999999998764

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.36  E-value=1.5e-11  Score=99.63  Aligned_cols=272  Identities=13%  Similarity=0.093  Sum_probs=197.9

Q ss_pred             HHHHHHHHhc-CCCchHHHHHHHHHHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhh
Q 019439           37 SFTSSLIADL-GVDAPVTQSAFAYFSLALVYGGVLLYRRQR-LRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLD  114 (341)
Q Consensus        37 ~~~~~~l~~~-~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~  114 (341)
                      ....++.... |+.-.+.+.+.+.+.+.+-+..+...+... +.++.+.+...+++..+..+.-..+++|.++...++..
T Consensus        22 TltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFK  101 (309)
T COG5070          22 TLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLTKAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFK  101 (309)
T ss_pred             HHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhheehhhhhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhc
Confidence            3444554332 444466667777666655555543333222 23445566777788877788889999999999999999


Q ss_pred             hchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCCCCC-CCCCcchHHhHHHHHHHHHHHHHHHHHHHHhhc-
Q 019439          115 CCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGD-GGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKK-  192 (341)
Q Consensus       115 ~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~~~~-~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~-  192 (341)
                      +++.+..+....+++|.|.+-....+.++.++.-+...++|.... ........|+++...-++.-+.+....|+..+- 
T Consensus       102 NltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~NclssaafVL~mrkri~lt  181 (309)
T COG5070         102 NLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLT  181 (309)
T ss_pred             cceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehhhHhHHHHHHHHHHhhccc
Confidence            999999999999999999999999999999998888887665221 112345679999999999999999998887543 


Q ss_pred             -CCchhhhHHhHHHHHHHHHHHHHhcccccccc--ccccchH--HHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHhhhhh
Q 019439          193 -KDRVEVVCMIGVYGLLVSAVQLSILELKSLES--VEWSTNI--LLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLT  267 (341)
Q Consensus       193 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~  267 (341)
                       ......++|..+.+..+.+...++.|..+...  -+.+...  ++.+-|+  ++++.-.+-.+..+-.+++..++++.+
T Consensus       182 Nf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl--~svgiSy~saWcvrVtSSTtySMvGAL  259 (309)
T COG5070         182 NFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGL--CSVGISYCSAWCVRVTSSTTYSMVGAL  259 (309)
T ss_pred             ccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHH--HHhhhhhccceeEeehhhhHHHHHHHh
Confidence             45567889999999988876666665433221  1222222  3333333  333333455678888999999999998


Q ss_pred             hHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeeccccCCC
Q 019439          268 ADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLN  310 (341)
Q Consensus       268 ~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~  310 (341)
                      .-.-..+-|.++|+|+.+...+....+=..+..+|..++.+++
T Consensus       260 NKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~  302 (309)
T COG5070         260 NKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQ  302 (309)
T ss_pred             hhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8888999999999999999999998888887777777665443

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.31  E-value=4.8e-12  Score=97.69  Aligned_cols=124  Identities=17%  Similarity=0.263  Sum_probs=101.1

Q ss_pred             HHHHHHHHHHHHHhhcCCchhhhHHhHHHHHHHHHHHHHhccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 019439          177 IFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLS  256 (341)
Q Consensus       177 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (341)
                      ++|+.+.+..|+..++.|+....++....+.+ ..+.....+..+....+...+....+.+.. +....+.++.+++++.
T Consensus         1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~   78 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLL-GTALAYLLYFYALKYI   78 (126)
T ss_pred             ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhcc-ceehHHHHHHHHHHhc
Confidence            46889999999999999999999999999887 543444444333344444555555666665 5566689999999999


Q ss_pred             hhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeee
Q 019439          257 GATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIY  302 (341)
Q Consensus       257 ~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~  302 (341)
                      ++..++....++|+++.+++++++||+++..+++|+++++.|+++.
T Consensus        79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~  124 (126)
T PF00892_consen   79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI  124 (126)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.28  E-value=1.8e-11  Score=97.31  Aligned_cols=218  Identities=18%  Similarity=0.262  Sum_probs=161.5

Q ss_pred             HHHHHHHHHHHHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCCCCCCCCCc
Q 019439           85 LLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSR  164 (341)
Q Consensus        85 ~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~  164 (341)
                      ....++....++.|..+++..+++.++.+..+.-.|+.+++++++|+|+...++++.++++.|++++.+.|+    ....
T Consensus        57 aPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN----~~a~  132 (290)
T KOG4314|consen   57 APFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN----EHAD  132 (290)
T ss_pred             cceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc----hhhh
Confidence            334456666799999999999999999999999999999999999999999999999999999999997764    4556


Q ss_pred             chHHhHHHHHHHHHHHHHHHHHHHHhhcCCchhhhHHhHHHHH---HHHHHHHH---hccccccccccccchHHHHHHHH
Q 019439          165 PLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGL---LVSAVQLS---ILELKSLESVEWSTNILLGFAGY  238 (341)
Q Consensus       165 ~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  238 (341)
                      .+.|+.+++.++...|+|.+..|+...+.+--...-++...|.   .+...+..   +...+.+..+...+|.  ...|.
T Consensus       133 e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsFA~~PWG--~l~G~  210 (290)
T KOG4314|consen  133 EIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGVEHLQSFAAAPWG--CLCGA  210 (290)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHHhhCCch--hhhhH
Confidence            7899999999999999999999999877655443333333332   22222222   2222222222112222  22244


Q ss_pred             HHHHHHHHHHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeeccccC
Q 019439          239 AASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKD  308 (341)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~  308 (341)
                      ..-...++.+.+.++....|...++-+.....--..++.++-+-..+...+.|..+|.+|.++....+++
T Consensus       211 A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~d~  280 (290)
T KOG4314|consen  211 AGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPEDK  280 (290)
T ss_pred             HHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecccch
Confidence            4345556677788888888988888877776777888877655577889999999999999988765543

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.28  E-value=8.4e-11  Score=89.01  Aligned_cols=100  Identities=27%  Similarity=0.459  Sum_probs=82.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhhh-------hhHHHHHHHHHHHHHH-HHHHHHHHhhhccchhHHHHhhhchHHHHHHHHHH
Q 019439           56 AFAYFSLALVYGGVLLYRRQR-------LRVAWYWYLLLGFVDV-QGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWL  127 (341)
Q Consensus        56 ~~r~~~~~l~l~~~~~~~~~~-------~~~~~~~~~~~g~~~~-~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l  127 (341)
                      .+|+..+.+++..+...+++.       .++++...+..|.++. ..+.+++.|+++.+ +.++++.+++|+++.+++.+
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            468888888877766654321       1233556667788887 44889999999999 58889999999999999999


Q ss_pred             HhhcccchhhHHHHHHHHHhhHHHhhcCC
Q 019439          128 FLGTRYSLWQLLGAALCVLGLGLVLLSDA  156 (341)
Q Consensus       128 ~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~  156 (341)
                      ++|||++++++.++.++++|+.++..++.
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            99999999999999999999999998764

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.25  E-value=5.1e-11  Score=91.87  Aligned_cols=117  Identities=26%  Similarity=0.445  Sum_probs=92.6

Q ss_pred             HHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhh-----hhhhHHHHHHHHHHHHH-HHHHHHHHHhhhccc
Q 019439           33 LALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRR-----QRLRVAWYWYLLLGFVD-VQGNFLVNKAYQFSS  106 (341)
Q Consensus        33 ~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-----~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~~~  106 (341)
                      ++......+...+  ..+|...+++|+..+.+ +++.....+     +..++++......|.+. ...+.+++.++++.+
T Consensus         3 ~a~~~~~~k~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~   79 (126)
T PF00892_consen    3 WAIYSVFSKKLLK--KISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYIS   79 (126)
T ss_pred             eeeHHHHHHHHhc--cCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcc
Confidence            3445555565554  37899999999999886 443333222     22344566677777775 445889999999999


Q ss_pred             hhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHh
Q 019439          107 ITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVL  152 (341)
Q Consensus       107 ~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~  152 (341)
                      ++.++++.++.|+++.+++++++||++++.+++|+++++.|+.++.
T Consensus        80 ~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   80 ASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999875

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.25  E-value=2.9e-12  Score=106.85  Aligned_cols=256  Identities=15%  Similarity=0.185  Sum_probs=177.0

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHhh-----------hhhhHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhhhc
Q 019439           48 VDAPVTQSAFAYFSLALVYGGVLLYRR-----------QRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCC  116 (341)
Q Consensus        48 ~~~p~~~~~~r~~~~~l~l~~~~~~~~-----------~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~  116 (341)
                      -..|..+++.+.+....+...+....+           +..-...+....+.+.......+-+++++|.+++...+-+++
T Consensus        58 Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsL  137 (347)
T KOG1442|consen   58 LDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSL  137 (347)
T ss_pred             cCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccceehhhcceEEEEeccch
Confidence            345899999888777665554433211           111112345555666666666678999999999999999999


Q ss_pred             hHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCCCCCCCCCcchHHhHHHHHHHHHHHHHHHHHHHHhhcCC--
Q 019439          117 TIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKD--  194 (341)
Q Consensus       117 ~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~--  194 (341)
                      ..+|+++++++++|+|-+.....+..++++|-.+=...+.   ..+...+.|.++++.|+++-|+..+..||.....+  
T Consensus       138 ttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~---~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~  214 (347)
T KOG1442|consen  138 TTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEG---STGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDC  214 (347)
T ss_pred             hhhHHHHhHHhhcccccccccceeehhheehheecccccc---ccCccchhhhHHHHHHHHHHHHHHHhhheecccccCe
Confidence            9999999999999999999999999988888554432221   23556779999999999999999999998755432  


Q ss_pred             chhhhHHhHHHHHHHHHHHHHhccc-ccccc---c-cccchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHhhhhhhH
Q 019439          195 RVEVVCMIGVYGLLVSAVQLSILEL-KSLES---V-EWSTNILLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTAD  269 (341)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~p  269 (341)
                      -....++..+.+.+..++...+.+. +....   . +++.|..+.+-|.  ..+.-.....+-+|-++|.+-++...-.-
T Consensus       215 iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsgl--fgF~mgyvTg~QIK~TSplThnISgTAka  292 (347)
T KOG1442|consen  215 IWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGL--FGFAMGYVTGWQIKVTSPLTHNISGTAKA  292 (347)
T ss_pred             ehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHH--HHHHhhheeeEEEEecccceeeecHhHHH
Confidence            2445678888887777543333322 22222   1 2223332222222  21111122222344577888778777777


Q ss_pred             HHHHHHHHHHhccccchhhhhHHhhheeeeeeeeccccC
Q 019439          270 MWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKD  308 (341)
Q Consensus       270 v~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~  308 (341)
                      ..-.+++..+++|.-+..-|.|-.+++.|...|.+.+++
T Consensus       293 ~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~  331 (347)
T KOG1442|consen  293 AAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEH  331 (347)
T ss_pred             HHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHH
Confidence            888899999999999999999999999999999876543

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.15  E-value=8.3e-10  Score=88.44  Aligned_cols=137  Identities=17%  Similarity=0.288  Sum_probs=109.5

Q ss_pred             HhHHHHHHHHHHHHHHHHHHHHhhc-------CCchhhhHHhHHHHHHHHHHHHHhccccccccc-------cc--cchH
Q 019439          168 GDVLVIAGTIFFATSNVGEEFFVKK-------KDRVEVVCMIGVYGLLVSAVQLSILELKSLESV-------EW--STNI  231 (341)
Q Consensus       168 G~~~~l~a~~~~a~~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~--~~~~  231 (341)
                      |.++++.+.++.++++++.|+..++       .++.+...+....+.++..+...+.|.......       +.  ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            6789999999999999999998655       477888899999999998877777665442211       11  1122


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeec
Q 019439          232 LLGFAGYAASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYST  304 (341)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  304 (341)
                      ....+..+...+..+......+++.++...++...+..+...+++++++||+++..+++|.++.+.|.++|++
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            3333333445556678888899999999999999999999999999999999999999999999999999875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.14  E-value=1.1e-10  Score=97.62  Aligned_cols=267  Identities=14%  Similarity=0.138  Sum_probs=176.6

Q ss_pred             HHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHH-HhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhc-cchhHHHHhhh
Q 019439           38 FTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLL-YRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQF-SSITSVTLLDC  115 (341)
Q Consensus        38 ~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~-~~~~~~~~l~~  115 (341)
                      .+.-.+.++...+--.+++.+|++.+.--++..- ....+++.+.+.+...-.+.+..+.+-++++++ ++...-.++++
T Consensus        20 v~lE~L~~~~pgsgNLITFaqFlFia~eGlif~skf~~~k~kiplk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRs   99 (330)
T KOG1583|consen   20 VFLELLVRNEPGSGNLITFAQFLFIATEGLIFTSKFFTVKPKIPLKDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRS   99 (330)
T ss_pred             HHHHHHHHhCCCCeeehHHHHHHHHHHhceeeeccccccCCCCchhhhheehheeeeeeeeccceeeecccceEEEEEec
Confidence            4444555554444567788787666554333321 111224444555555556666668899999998 77777888999


Q ss_pred             chHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCCCCC---------C----CCCcchHHhHHHHHHHHHHHHH
Q 019439          116 CTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGD---------G----GGSRPLLGDVLVIAGTIFFATS  182 (341)
Q Consensus       116 ~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~~~~---------~----~~~~~~~G~~~~l~a~~~~a~~  182 (341)
                      -+++.+++++++++|+|.+.+|+.++++..+|+++.+..+..+-         +    .......|+.+...+-+.-|..
T Consensus       100 gsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~m  179 (330)
T KOG1583|consen  100 GSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYM  179 (330)
T ss_pred             CcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999886544211         0    0111247888888899999999


Q ss_pred             HHHHHHHhhc--CCchhhhHHhHHHHHHHHHHHHH-h-------cccc--ccccccccch-HHHHHHHHHHHHHHHHHHH
Q 019439          183 NVGEEFFVKK--KDRVEVVCMIGVYGLLVSAVQLS-I-------LELK--SLESVEWSTN-ILLGFAGYAASSFMFYTLA  249 (341)
Q Consensus       183 ~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  249 (341)
                      .++++..-++  .++.+.++|.-.......+...- +       +..+  ..+..+..-. .+..+++   .....|.|.
T Consensus       180 giyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~---n~L~Qy~Ci  256 (330)
T KOG1583|consen  180 GIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLF---NVLTQYFCI  256 (330)
T ss_pred             HHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHH---HHHHHHHHH
Confidence            9999988777  46788888877766555531100 0       0000  0111111111 1111111   222334443


Q ss_pred             HH---HHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeecccc
Q 019439          250 PF---VLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEK  307 (341)
Q Consensus       250 ~~---~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  307 (341)
                      ..   .-...++..++++..+.-.++.+++++.|+.+.+++.|+|.+++..|.+++.....
T Consensus       257 kgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~~  317 (330)
T KOG1583|consen  257 KGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVWN  317 (330)
T ss_pred             HhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence            32   22234555667777788999999999999999999999999999999999875433

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.13  E-value=2.6e-09  Score=93.37  Aligned_cols=130  Identities=22%  Similarity=0.253  Sum_probs=104.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhhh---hhHHHHHHHHHHHHHHHH-
Q 019439           19 TLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR---LRVAWYWYLLLGFVDVQG-   94 (341)
Q Consensus        19 ~~~g~~~~~~~al~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~---~~~~~~~~~~~g~~~~~~-   94 (341)
                      ..+|..+++..+++++......+...++...++.....+++..+.+++.+......+.   ....+...+..+++.... 
T Consensus       126 ~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (260)
T TIGR00950       126 NPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTALA  205 (260)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHH
Confidence            3568888888999888888888887653333345566578888888888776654322   233455567677776655 


Q ss_pred             HHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhh
Q 019439           95 NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGL  148 (341)
Q Consensus        95 ~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv  148 (341)
                      ..++++++++.+++.++.+.++.|++++++++++++|+++..+++|..+.+.|+
T Consensus       206 ~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       206 YFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            779999999999999999999999999999999999999999999999999986

>TIGR00803 nst UDP-galactose transporter

Probab=99.04  E-value=5.6e-09  Score=89.07  Aligned_cols=192  Identities=14%  Similarity=0.125  Sum_probs=121.7

Q ss_pred             hhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCC-------------------CC--CCCCCcc
Q 019439          107 ITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDA-------------------GG--DGGGSRP  165 (341)
Q Consensus       107 ~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~-------------------~~--~~~~~~~  165 (341)
                      +.......+..++++++.+....+||.+..++++.++...|+......+.                   ..  .....+.
T Consensus         4 vPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g~~   83 (222)
T TIGR00803         4 VPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGNP   83 (222)
T ss_pred             ccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccccH
Confidence            33445566777888888888888888888888888888777764322211                   00  0011345


Q ss_pred             hHHhHHHHHHHHHHHHHHHHHHHHhhcCCchh--hhHHhHHHHHHHHHHHHHhcccccccc----ccccchHHHHHHHHH
Q 019439          166 LLGDVLVIAGTIFFATSNVGEEFFVKKKDRVE--VVCMIGVYGLLVSAVQLSILELKSLES----VEWSTNILLGFAGYA  239 (341)
Q Consensus       166 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~  239 (341)
                      ..|....+.++.+-+...++.++..++.+...  ........+.+.........+......    ..+....+...   .
T Consensus        84 ~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  160 (222)
T TIGR00803        84 VVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVG---L  160 (222)
T ss_pred             HHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHH---H
Confidence            67777788888888899999998866543221  112222222222111111111111111    11122222111   1


Q ss_pred             HHHHHHHHHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeee
Q 019439          240 ASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIY  302 (341)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~  302 (341)
                       .......+....+++.++...++...++++++.+++++++||+++..+++|..+++.|+.+|
T Consensus       161 -~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       161 -LNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             -HHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence             22223567788999999999999999999999999999999999999999999999998875

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=99.03  E-value=2.7e-08  Score=88.02  Aligned_cols=212  Identities=14%  Similarity=0.182  Sum_probs=123.9

Q ss_pred             HHHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCCCCCCCCCcch-------
Q 019439           94 GNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSRPL-------  166 (341)
Q Consensus        94 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~~~-------  166 (341)
                      +..+.+.|+.+.|.+..+++..+..++.++++..++|||++++.+.|..++++|..++......+++..+...       
T Consensus        63 g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~~~~~~  142 (300)
T PF05653_consen   63 GEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELIALLSQ  142 (300)
T ss_pred             chHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHHHHhcC
Confidence            3678889999999999999999999999999999999999999999999999999987755443221111000       


Q ss_pred             HHh-HHH-HHHHHHHHHHHHHHHHHhhcCCchhhhHHhHHHHHHHHHHH----HHhccc-cccccccccchHHHHHHHHH
Q 019439          167 LGD-VLV-IAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQ----LSILEL-KSLESVEWSTNILLGFAGYA  239 (341)
Q Consensus       167 ~G~-~~~-l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~  239 (341)
                      .+. .+. +...+...+.....+|. .+.+...+.....+.+....+..    ..+.+. .....+ ..+..+...+...
T Consensus       143 ~~fl~y~~~~~~~~~~L~~~~~~r~-g~~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~~f-~~~~~y~l~~~~v  220 (300)
T PF05653_consen  143 PGFLVYFILVLVLILILIFFIKPRY-GRRNILVYISICSLIGSFTVLSAKAISILIKLTFSGDNQF-TYPLTYLLLLVLV  220 (300)
T ss_pred             cceehhHHHHHHHHHHHHHhhcchh-cccceEEEEEEeccccchhhhHHHHHHHHHHHHhcCchhh-hhhHHHHHHHHHH
Confidence            111 111 11111111222222221 11222222222222232222110    011110 111111 1122233444444


Q ss_pred             HHHHHHHHHHHHHHhhhhhhH-HHhhhhhhHHHHHHHHHHHhcccc--ch----hhhhHHhhheeeeeeeecccc
Q 019439          240 ASSFMFYTLAPFVLKLSGATM-FNLSLLTADMWAVVFRICFYHQKV--DW----LYFLAFGIVVIGLIIYSTTEK  307 (341)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~a~~-~~~~~~~~pv~~~l~~~~~~~e~~--~~----~~~~G~~li~~g~~l~~~~~~  307 (341)
                      .+........++++++.+++. .++....-...+++-|.++++|..  +.    ....|..+++.|+.+.+..++
T Consensus       221 ~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~~~~  295 (300)
T PF05653_consen  221 VTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSSSKD  295 (300)
T ss_pred             HHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheeeccCc
Confidence            466666777888999977654 444444555788888999999854  33    556788899999999875444

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.96  E-value=7.3e-07  Score=79.63  Aligned_cols=226  Identities=13%  Similarity=0.088  Sum_probs=139.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHh-hhchHHHHHHHHHHHhhccc-------chhhHHHHHHHHHhh
Q 019439           77 LRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRY-------SLWQLLGAALCVLGL  148 (341)
Q Consensus        77 ~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~l~e~~-------~~~~~ig~~l~~~Gv  148 (341)
                      ....+..-++.|++...++.+++.++++.+++.+.++ ..++.+...++..++++|-.       .....+|+++.++|+
T Consensus        69 ~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi  148 (345)
T PRK13499         69 SGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGV  148 (345)
T ss_pred             CHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHH
Confidence            3445666788899999999999999999999999766 68899999999999998754       244678999999999


Q ss_pred             HHHhh----cCCCCC---CCCCcchHHhHHHHHHHHHHHHHH-------HHHHHHh-hcCCchhhhHHhHH---HHHHHH
Q 019439          149 GLVLL----SDAGGD---GGGSRPLLGDVLVIAGTIFFATSN-------VGEEFFV-KKKDRVEVVCMIGV---YGLLVS  210 (341)
Q Consensus       149 ~l~~~----~~~~~~---~~~~~~~~G~~~~l~a~~~~a~~~-------v~~~~~~-~~~~~~~~~~~~~~---~~~~~~  210 (341)
                      .+...    .+..++   +.+.+...|+.+++.+++.+++|+       ...+... ...++.....-+..   .+.++.
T Consensus       149 ~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~  228 (345)
T PRK13499        149 AIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAIT  228 (345)
T ss_pred             HHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHH
Confidence            99988    433211   133456799999999999999999       4443321 12344332222222   333332


Q ss_pred             HHHHHhc---ccccc---ccc--c----ccchHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-HHH---hhhhhhHHHHHH
Q 019439          211 AVQLSIL---ELKSL---ESV--E----WSTNILLGFAGYAASSFMFYTLAPFVLKLSGAT-MFN---LSLLTADMWAVV  274 (341)
Q Consensus       211 ~~~~~~~---~~~~~---~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~---~~~~~~pv~~~l  274 (341)
                      -......   ..++.   .+.  +    +.......+.|+  .-...+..+..+-++.+.. ...   +.+....+++.+
T Consensus       229 n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~--~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistl  306 (345)
T PRK13499        229 NLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV--MWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNL  306 (345)
T ss_pred             HHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHH--HHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHH
Confidence            2111111   11121   111  1    111111122222  1222233444444444322 222   443556689999


Q ss_pred             HHHHHhccccc------hhhhhHHhhheeeeeeeecc
Q 019439          275 FRICFYHQKVD------WLYFLAFGIVVIGLIIYSTT  305 (341)
Q Consensus       275 ~~~~~~~e~~~------~~~~~G~~li~~g~~l~~~~  305 (341)
                      +|+ ++||.=+      ...++|.++++.|.++....
T Consensus       307 wGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        307 WGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             hhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            998 4899866      57788999999988876543

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.89  E-value=2.3e-08  Score=88.41  Aligned_cols=131  Identities=9%  Similarity=0.098  Sum_probs=92.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCCchhhhHHhHHHHHHHHHHHHHhcc--ccccccccccchHHHHHHHHHHHHHHHH
Q 019439          169 DVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILE--LKSLESVEWSTNILLGFAGYAASSFMFY  246 (341)
Q Consensus       169 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (341)
                      ..+.+++++++|..++.+|+..++.++.  ..+....+++... +.....  ....+..+...+.... .+.. .....+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~--~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~   77 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKEPDF--LWWALLAHSVLLT-PYGLWYLAQVGWSRLPATFWLLLA-ISAV-ANMVYF   77 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCchhHH--HHHHHHHHHHHHH-HHHHHhcccCCCCCcchhhHHHHH-HHHH-HHHHHH
Confidence            4678999999999999999887665553  3444444444443 322221  2222222222222222 2222 444556


Q ss_pred             HHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeec
Q 019439          247 TLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYST  304 (341)
Q Consensus       247 ~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  304 (341)
                      .++..++++.++..++....+.|+++.+++++++||+++..+++|.++++.|+++...
T Consensus        78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            7888899999999999999999999999999999999999999999999999987654

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.88  E-value=2.9e-08  Score=88.50  Aligned_cols=137  Identities=11%  Similarity=0.103  Sum_probs=104.7

Q ss_pred             cchHHhHHHHHHHHHHHHHHHHHHHHhhcCCchhhhHHhHHHHHHHHHHHHHhccc-cccc-cc-cccchHHHHHHHHHH
Q 019439          164 RPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILEL-KSLE-SV-EWSTNILLGFAGYAA  240 (341)
Q Consensus       164 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~-~~~~~~~~~~~~~~~  240 (341)
                      +...|..+.++++++|+...+..|.. .+.+|.+..++....+.++..+......+ .... .. ++..... ...+.. 
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-   81 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFM-LAVSAV-   81 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHH-HHHHHH-
Confidence            45689999999999999999999765 67899999999999988766433322211 1110 01 1222221 223333 


Q ss_pred             HHHHHHHHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeee
Q 019439          241 SSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYS  303 (341)
Q Consensus       241 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~  303 (341)
                      .....+.++++++++.++..+++...+.|++..+++++++||+++..+++|.++.++|+++..
T Consensus        82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            444557889999999999999999999999999999999999999999999999999988764

>TIGR00688 rarD rarD protein

Probab=98.87  E-value=3.4e-08  Score=86.17  Aligned_cols=134  Identities=13%  Similarity=0.182  Sum_probs=101.3

Q ss_pred             HHhHHHHHHHHHHHHHHHHHHHHhhcCCchhhhHHhHHHHHHHHHHHHHhcccc-----ccccccccchH-HHHHHHHHH
Q 019439          167 LGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELK-----SLESVEWSTNI-LLGFAGYAA  240 (341)
Q Consensus       167 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~  240 (341)
                      +|..+.++++++|+...+..|. ..+.+|.+..++.++.+.++..+........     ..+..+..... .....+.  
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--   78 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKL-LKPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL--   78 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH--
Confidence            4788999999999999999998 4679999999999998887764333332211     11111112211 2222232  


Q ss_pred             HHHHHHHHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeee
Q 019439          241 SSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYS  303 (341)
Q Consensus       241 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~  303 (341)
                      .....+.++..++++.++..+++...+.|+++.+++++++||+++..+++|..+.++|+.+..
T Consensus        79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            244456888999999999999999999999999999999999999999999999999988653

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.86  E-value=2.6e-07  Score=82.26  Aligned_cols=133  Identities=16%  Similarity=0.011  Sum_probs=99.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhhh---hhHHHHHHHHHHHHHHHH-H
Q 019439           20 LYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR---LRVAWYWYLLLGFVDVQG-N   95 (341)
Q Consensus        20 ~~g~~~~~~~al~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~---~~~~~~~~~~~g~~~~~~-~   95 (341)
                      ..|.+++...+++++......+...+  ..+|....... .+..+++.++.......   ....+...+..|++.... +
T Consensus       147 ~~G~ll~l~aa~~~a~~~v~~r~~~~--~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~  223 (293)
T PRK10532        147 LTGAALALGAGACWAIYILSGQRAGA--EHGPATVAIGS-LIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPY  223 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhc--cCCchHHHHHH-HHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHH
Confidence            45788888888887777777776643  34555554433 44555555555433221   122233456777777777 6


Q ss_pred             HHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcC
Q 019439           96 FLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (341)
Q Consensus        96 ~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~  155 (341)
                      .++++++++.+++.++++.++.|+++.++++++++|+++..+++|.++.+.|++......
T Consensus       224 ~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        224 SLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            699999999999999999999999999999999999999999999999999999997654

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.82  E-value=1.9e-07  Score=83.15  Aligned_cols=132  Identities=15%  Similarity=-0.029  Sum_probs=101.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhh-----hhhHHHHHHHHHHHHHHHH
Q 019439           20 LYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQ-----RLRVAWYWYLLLGFVDVQG   94 (341)
Q Consensus        20 ~~g~~~~~~~al~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~   94 (341)
                      ..|.+++...+++++......+...+   .++...+.+++....+++.++......     .....|...+..+++....
T Consensus       149 ~~G~l~~l~a~~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~  225 (292)
T PRK11272        149 PWGAILILIASASWAFGSVWSSRLPL---PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSII  225 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCC---CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHH
Confidence            35777777777777777666655432   234445566777777766665543221     1234566677777776666


Q ss_pred             -HHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhc
Q 019439           95 -NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLS  154 (341)
Q Consensus        95 -~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~  154 (341)
                       ..++++++++.+++.++.+.++.|++++++++++++|+++..+++|.++.+.|+.+....
T Consensus       226 ~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~  286 (292)
T PRK11272        226 AISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG  286 (292)
T ss_pred             HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence             779999999999999999999999999999999999999999999999999999998764

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.79  E-value=2.6e-07  Score=84.02  Aligned_cols=136  Identities=15%  Similarity=0.132  Sum_probs=92.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHH-hhhh-------hhHHHHHHHHHHHHH
Q 019439           20 LYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLY-RRQR-------LRVAWYWYLLLGFVD   91 (341)
Q Consensus        20 ~~g~~~~~~~al~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~-~~~~-------~~~~~~~~~~~g~~~   91 (341)
                      ..|.++.+..+++++......+...+ ...++...+++...+..+.+.+.... ....       ........+..++..
T Consensus       188 ~lG~~l~l~aa~~wa~~~il~~~~~~-~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~t  266 (358)
T PLN00411        188 LIGGALLTIQGIFVSVSFILQAHIMS-EYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAIIT  266 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-HcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHHHHHHH
Confidence            44777777777777776666655433 23334455555554444443333222 1110       011112233334443


Q ss_pred             HHHHHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCC
Q 019439           92 VQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDA  156 (341)
Q Consensus        92 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~  156 (341)
                      .....++++++++.+++.+++..++.|++++++++++++|++++.+++|.++.+.|+.+....+.
T Consensus       267 ~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~  331 (358)
T PLN00411        267 SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKA  331 (358)
T ss_pred             HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhh
Confidence            33467899999999999999999999999999999999999999999999999999999886543

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.78  E-value=1.4e-07  Score=81.40  Aligned_cols=220  Identities=14%  Similarity=0.160  Sum_probs=129.8

Q ss_pred             HHHHHHHH-HHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCCCCCCCCCc-
Q 019439           87 LGFVDVQG-NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDAGGDGGGSR-  164 (341)
Q Consensus        87 ~g~~~~~~-~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~~~~~~~~~-  164 (341)
                      .|.+.+.. ...-|.|+.+.|.+..+++..++.+..++++..++|||++....+|.+++++|-.++....+.+++.... 
T Consensus        69 ~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~  148 (335)
T KOG2922|consen   69 AGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVE  148 (335)
T ss_pred             HHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHH
Confidence            35554444 8888899999999999999999999999999999999999999999999999999998766543211110 


Q ss_pred             ------chHHhHHHHHHH-HHHHHHHHHHHHHhhcCCchhhhHHhHHHHHHHHHH-------HHHh-ccccccccccccc
Q 019439          165 ------PLLGDVLVIAGT-IFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAV-------QLSI-LELKSLESVEWST  229 (341)
Q Consensus       165 ------~~~G~~~~l~a~-~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-~~~~~~~~~~~~~  229 (341)
                            ...+.+.-..-. +...+-....+   +++.....+.|..+.+.+-++-       -..+ .......+.. .+
T Consensus       149 el~~~~~~~~Fliy~~~iil~~~il~~~~~---p~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ql~-~~  224 (335)
T KOG2922|consen  149 EVWELATEPGFLVYVIIIILIVLILIFFYA---PRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNNQLF-YP  224 (335)
T ss_pred             HHHHHhcCccHHHHHHHHHHHHHHHheeec---ccccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCcccc-cH
Confidence                  011111111111 11111111111   1222222333333333332210       0000 0001111111 12


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-HHHhhhhhhHHHHHHHHHHHhccccch------hhhhHHhhheeeeeee
Q 019439          230 NILLGFAGYAASSFMFYTLAPFVLKLSGAT-MFNLSLLTADMWAVVFRICFYHQKVDW------LYFLAFGIVVIGLIIY  302 (341)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~~~~~~~~~pv~~~l~~~~~~~e~~~~------~~~~G~~li~~g~~l~  302 (341)
                      ..+...+.+..+........+.+++..++. +.++....-..++++-+.++|+|--..      ....|...++.|+.+.
T Consensus       225 ~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL  304 (335)
T KOG2922|consen  225 LTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLL  304 (335)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEe
Confidence            233333444445555556667888886665 445555556677888899999986432      6778999999999999


Q ss_pred             eccccCCC
Q 019439          303 STTEKDLN  310 (341)
Q Consensus       303 ~~~~~~~~  310 (341)
                      ...++.+.
T Consensus       305 ~~~kd~~~  312 (335)
T KOG2922|consen  305 HRTKDMEI  312 (335)
T ss_pred             eeeccccc
Confidence            76554443

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.74  E-value=3.5e-07  Score=70.26  Aligned_cols=122  Identities=7%  Similarity=0.037  Sum_probs=86.9

Q ss_pred             HHhHHHHHHHHHHHHHHHHHHHHhhcCCchhhhHHhHHHHHHHHHHHHHhccccccccccccchHHHHHHHHHHHHHHHH
Q 019439          167 LGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFY  246 (341)
Q Consensus       167 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (341)
                      .|+++.+.+.++-+..+++.|+-.++.+..+....    . ... +.. .           .......+.+++ +...++
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~----~-~~~-~~~-~-----------~~p~~~i~lgl~-~~~la~   62 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWD----F-IAA-LLA-F-----------GLALRAVLLGLA-GYALSM   62 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhH----H-HHH-HHH-H-----------hccHHHHHHHHH-HHHHHH
Confidence            36788999999999999999999877654442211    0 001 000 0           111112344555 556668


Q ss_pred             HHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHH--HhccccchhhhhHHhhheeeeeeeecccc
Q 019439          247 TLAPFVLKLSGATMFNLSLLTADMWAVVFRIC--FYHQKVDWLYFLAFGIVVIGLIIYSTTEK  307 (341)
Q Consensus       247 ~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~--~~~e~~~~~~~~G~~li~~g~~l~~~~~~  307 (341)
                      .+|..++++.+...+.......++...+.++.  ++||+++..+++|+++|++|+++.+++++
T Consensus        63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            99999999999888887777777777777774  89999999999999999999999875443

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=98.70  E-value=6.1e-10  Score=91.85  Aligned_cols=246  Identities=16%  Similarity=0.130  Sum_probs=154.3

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhh-hchHHHHHHHH
Q 019439           48 VDAPVTQSAFAYFSLALVYGGVLLYRRQR-LRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLD-CCTIAWAIVLT  125 (341)
Q Consensus        48 ~~~p~~~~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~~~ll~  125 (341)
                      ..+|..++..-.+.+.++.+...+...+. ..+.+..-++.|.+..+++...+.|+++.+++.+.++. .++.+-+.+++
T Consensus        25 GG~p~qQ~lGtT~GALifaiiv~~~~~p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~g  104 (288)
T COG4975          25 GGKPYQQTLGTTLGALIFAIIVFLFVSPELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFG  104 (288)
T ss_pred             CCChhHhhhhccHHHHHHHHHHheeecCccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeee
Confidence            34577776544433333333333332222 23445666777888888899999999999999999885 66777799999


Q ss_pred             HHHhhcccchhhH----HHHHHHHHhhHHHhhcCCCC--CCCCCcchHHhHHHHHHHHHHHHHHHHHHHHhhcCCchhhh
Q 019439          126 WLFLGTRYSLWQL----LGAALCVLGLGLVLLSDAGG--DGGGSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVV  199 (341)
Q Consensus       126 ~l~l~e~~~~~~~----ig~~l~~~Gv~l~~~~~~~~--~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~  199 (341)
                      .+.++|..+..+.    +++++.++|+.+....+.++  ++..++...|....+.+.+.|-.|.+..+...  .+.....
T Consensus       105 V~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~--v~g~sai  182 (288)
T COG4975         105 VFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFD--VDGLSAI  182 (288)
T ss_pred             EEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeecccc--ccchhhh
Confidence            9999999987765    56778888988888776533  24445567899999999999999999887753  4444443


Q ss_pred             HHhHHHHHHHHHHHHHhccc-cccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhHHHhhhhhhHHHHHHHHH
Q 019439          200 CMIGVYGLLVSAVQLSILEL-KSLESVEWSTNILLGFAGYAASSFMFYTLAPFVLKLSG-ATMFNLSLLTADMWAVVFRI  277 (341)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-a~~~~~~~~~~pv~~~l~~~  277 (341)
                      .-+.....+..+ ....... ....+..|........-+.+      +..+..+-+..+ |+-.++... ..+++.+-|+
T Consensus       183 LPqAiGMv~~al-i~~~~~~~~~~~K~t~~nii~G~~Wa~G------Nl~ml~a~~~~GvAt~FSlSQl-gViisTiGGI  254 (288)
T COG4975         183 LPQAIGMVIGAL-ILGFFKMEKRFNKYTWLNIIPGLIWAIG------NLFMLLAAQKVGVATSFSLSQL-GVIISTIGGI  254 (288)
T ss_pred             hHHHHHHHHHHH-HHhhcccccchHHHHHHHHhhHHHHHhh------HHHHHHhhhhhceeeeeeHhhh-eeeeeecceE
Confidence            333222222221 2212221 12222223232222222222      344445555544 344444444 3478899999


Q ss_pred             HHhccccchhh----hhHHhhheeeeeeee
Q 019439          278 CFYHQKVDWLY----FLAFGIVVIGLIIYS  303 (341)
Q Consensus       278 ~~~~e~~~~~~----~~G~~li~~g~~l~~  303 (341)
                      ++++|+=|..+    ++|.++++.|.++..
T Consensus       255 l~L~ekKtkkEm~~v~iGiilivvgai~lg  284 (288)
T COG4975         255 LFLGEKKTKKEMVYVIIGIILIVVGAILLG  284 (288)
T ss_pred             EEEeccCchhhhhhhhhhHHHHHHHhhhhh
Confidence            99999988855    457788877766543

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.69  E-value=1.4e-06  Score=77.76  Aligned_cols=136  Identities=15%  Similarity=0.061  Sum_probs=98.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCchHHHHHHHHHHHHHHHHHHHH-Hhh---------hhhhHHHHHHHHHH
Q 019439           20 LYLLFLGQLVSFTLALMSFTSSLIADLG-VDAPVTQSAFAYFSLALVYGGVLL-YRR---------QRLRVAWYWYLLLG   88 (341)
Q Consensus        20 ~~g~~~~~~~al~~~~~~~~~~~l~~~~-~~~p~~~~~~r~~~~~l~l~~~~~-~~~---------~~~~~~~~~~~~~g   88 (341)
                      +.|.++++..+++++......+...++. ..+......+..+...+.+..... ...         ......+...+..|
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  221 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA  221 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence            4688888888888888888887764432 222233333333333332222211 111         11234466677778


Q ss_pred             HHHHHH-HHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcC
Q 019439           89 FVDVQG-NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (341)
Q Consensus        89 ~~~~~~-~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~  155 (341)
                      ++.... ..+++.++++.+++.++.+..+.|++..++++++++|+++..+++|.++.++|+.+...+.
T Consensus       222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            777776 7799999999999999999999999999999999999999999999999999999887653

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.69  E-value=8e-07  Score=79.19  Aligned_cols=130  Identities=19%  Similarity=0.009  Sum_probs=92.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhh----hhhHHHHHHHHHHHHHHHHH
Q 019439           20 LYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQ----RLRVAWYWYLLLGFVDVQGN   95 (341)
Q Consensus        20 ~~g~~~~~~~al~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~   95 (341)
                      ..|.++++..+++++......+...+  ..+|.....   ....+.+.+.......    .....+...+..|+.....+
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~~~--~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~  229 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKYAR--GKNGITLFF---ILTALALWIKYFLSPQPAMVFSLPAIIKLLLAAAAMGFGY  229 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccC--CCCchhHHH---HHHHHHHHHHHHHhcCccccCCHHHHHHHHHHHHHHHHHH
Confidence            34777888888888877777777643  234544322   2222333322222211    12234555555665444458


Q ss_pred             HHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhc
Q 019439           96 FLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLS  154 (341)
Q Consensus        96 ~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~  154 (341)
                      .++++++++.+++.++.+.++.|++..++++++++|+++..+++|.++++.|+.+....
T Consensus       230 ~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~  288 (295)
T PRK11689        230 AAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA  288 (295)
T ss_pred             HHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence            89999999999999999999999999999999999999999999999999999888754

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.62  E-value=1.1e-06  Score=78.70  Aligned_cols=136  Identities=14%  Similarity=0.079  Sum_probs=97.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhh-h-hhH---------H---HHH-H
Q 019439           20 LYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQ-R-LRV---------A---WYW-Y   84 (341)
Q Consensus        20 ~~g~~~~~~~al~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~-~~~---------~---~~~-~   84 (341)
                      ..|.+++...+++++......+...+....+|...+.+....+.+.+.|....... . ...         .   ... .
T Consensus       144 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (302)
T TIGR00817       144 WAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVS  223 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHH
Confidence            44777777777776666666665543335678888888888888887777653221 1 010         0   011 1


Q ss_pred             HHHHHHHHHH-HHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcC
Q 019439           85 LLLGFVDVQG-NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (341)
Q Consensus        85 ~~~g~~~~~~-~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~  155 (341)
                      +..+...... +.+++.++++++++.+++...+.|+++.++++++++|+++..+++|.++++.|+.+....+
T Consensus       224 ~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k  295 (302)
T TIGR00817       224 LVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK  295 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence            2222212222 4566789999999999999999999999999999999999999999999999999988654

specificities overlap.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.60  E-value=1.2e-06  Score=77.76  Aligned_cols=130  Identities=12%  Similarity=0.064  Sum_probs=98.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHH----HHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHH
Q 019439           19 TLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYF----SLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQG   94 (341)
Q Consensus        19 ~~~g~~~~~~~al~~~~~~~~~~~l~~~~~~~p~~~~~~r~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~   94 (341)
                      ..||++++++.+++.+......+..    ..+|...++....    .+.+++.++ .+.++...+..+..++.|++....
T Consensus       150 ~~~Gi~~~l~sg~~y~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Gi~~~ia  224 (290)
T TIGR00776       150 FKKGILLLLMSTIGYLVYVVVAKAF----GVDGLSVLLPQAIGMVIGGIIFNLGH-ILAKPLKKYAILLNILPGLMWGIG  224 (290)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHc----CCCcceehhHHHHHHHHHHHHHHHHH-hcccchHHHHHHHHHHHHHHHHHH
Confidence            3679999999988888887777754    2566666444443    333334333 111222233444455688887666


Q ss_pred             HHHHHHhhh-ccchhHHHHhhhchHHHHHHHHHHHhhcccchhhH----HHHHHHHHhhHHHhh
Q 019439           95 NFLVNKAYQ-FSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQL----LGAALCVLGLGLVLL  153 (341)
Q Consensus        95 ~~~~~~al~-~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~----ig~~l~~~Gv~l~~~  153 (341)
                      +.+|+.+.+ +.+++.+.++.+..|+...+.+++++||+.+++++    +|.++.+.|+.++..
T Consensus       225 ~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       225 NFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            889999999 99999999999999999999999999999999999    999999999988754

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.58  E-value=5.2e-07  Score=67.61  Aligned_cols=67  Identities=12%  Similarity=0.034  Sum_probs=59.6

Q ss_pred             HHHHHHHH-HHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhh
Q 019439           87 LGFVDVQG-NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLL  153 (341)
Q Consensus        87 ~g~~~~~~-~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~  153 (341)
                      .+++.... .+++..+++..|.+.+..+.++.++++.+++++++|||+++.+++|+.++++|+.++..
T Consensus        42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            33344444 77899999999999999999999999999999999999999999999999999988753

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.58  E-value=4.7e-06  Score=66.55  Aligned_cols=129  Identities=15%  Similarity=0.130  Sum_probs=101.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-----CCCchHHHHHHHHHHHHHHHHHHHHHhh-hh---------------hhHH
Q 019439           22 LLFLGQLVSFTLALMSFTSSLIADL-----GVDAPVTQSAFAYFSLALVYGGVLLYRR-QR---------------LRVA   80 (341)
Q Consensus        22 g~~~~~~~al~~~~~~~~~~~l~~~-----~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~---------------~~~~   80 (341)
                      |.+++....++.+.-....+...++     ...++..+.......+.+++.+...... ..               ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            3455666666677777777766554     4677888888888888888777655321 10               1123


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHH
Q 019439           81 WYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGL  150 (341)
Q Consensus        81 ~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l  150 (341)
                      +...+..|++....+...+..++++++...+++.....+.+.+++.++++|+++..+++|++++++|..+
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence            4556667777777799999999999999999999999999999999999999999999999999999875

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.41  E-value=1.9e-05  Score=69.85  Aligned_cols=133  Identities=29%  Similarity=0.297  Sum_probs=98.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHH-HHHHHHHHHHHHHHHHhh--hhhhHHHHHHHHHHHHHHH-H
Q 019439           19 TLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSA-FAYFSLALVYGGVLLYRR--QRLRVAWYWYLLLGFVDVQ-G   94 (341)
Q Consensus        19 ~~~g~~~~~~~al~~~~~~~~~~~l~~~~~~~p~~~~~-~r~~~~~l~l~~~~~~~~--~~~~~~~~~~~~~g~~~~~-~   94 (341)
                      ...|.+++...+++++......+...   ..++..... +.+........+......  ......+......|++... .
T Consensus       152 ~~~g~~~~l~a~~~~a~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~  228 (292)
T COG0697         152 SLLGLLLALAAALLWALYTALVKRLS---RLGPVTLALLLQLLLALLLLLLFFLSGFGAPILSRAWLLLLYLGVFSTGLA  228 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHH
Confidence            45688888888888876666666554   334444444 333322222223222222  2344567777888888885 5


Q ss_pred             HHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhc
Q 019439           95 NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLS  154 (341)
Q Consensus        95 ~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~  154 (341)
                      +.+++++++..+++..+++..+.|++..++++++++|+++..+++|..+.+.|+.+....
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         229 YLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            889999999999999999999999999999999999999999999999999999988754

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.40  E-value=2.4e-05  Score=71.41  Aligned_cols=135  Identities=14%  Similarity=0.041  Sum_probs=93.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCchHHHHHHHHHHHHHHHHHHHHHh-h---hhhh--------H-H
Q 019439           19 TLYLLFLGQLVSFTLALMSFTSSLIADLG-----VDAPVTQSAFAYFSLALVYGGVLLYR-R---QRLR--------V-A   80 (341)
Q Consensus        19 ~~~g~~~~~~~al~~~~~~~~~~~l~~~~-----~~~p~~~~~~r~~~~~l~l~~~~~~~-~---~~~~--------~-~   80 (341)
                      .+.|.+++.+.+++++.-....+...++.     ..++.....+....+.++++|+.... .   ....        . .
T Consensus       192 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~  271 (350)
T PTZ00343        192 TWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYT  271 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccc
Confidence            35688888888888888888887765432     24455555555667777777765522 1   1100        0 0


Q ss_pred             HHHHHH----HHHHHHHHHHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhh
Q 019439           81 WYWYLL----LGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLL  153 (341)
Q Consensus        81 ~~~~~~----~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~  153 (341)
                      +...+.    .++.....+...+.+++.+++..+++...+.|+++.++++++++|+++..+++|.++++.|+.+...
T Consensus       272 ~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~  348 (350)
T PTZ00343        272 KGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSL  348 (350)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhh
Confidence            111111    1222222233445799999999999999999999999999999999999999999999999987653

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.33  E-value=3.4e-06  Score=63.67  Aligned_cols=67  Identities=15%  Similarity=0.280  Sum_probs=57.6

Q ss_pred             HHHHHHHHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeeccccC
Q 019439          241 SSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKD  308 (341)
Q Consensus       241 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~  308 (341)
                      .....+.++..+.++.++ .+.....+.|+++.+++.++++|+++..+++|.+++++|+++....+..
T Consensus        44 ~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   44 GFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            333457888999999885 6668888899999999999999999999999999999999998765543

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.28  E-value=1.3e-05  Score=59.99  Aligned_cols=63  Identities=14%  Similarity=0.171  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeee
Q 019439          241 SSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYS  303 (341)
Q Consensus       241 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~  303 (341)
                      +...++.++..++++.+..++.....+.++++.++|++++||+++..+++|..++++|+++..
T Consensus        46 ~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         46 CLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            444457888999999888877776779999999999999999999999999999999988754

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.24  E-value=1.1e-05  Score=68.96  Aligned_cols=140  Identities=14%  Similarity=0.157  Sum_probs=106.6

Q ss_pred             cchHHhHHHHHHHHHHHHHHHHHHHHhhcCCchhhhHHhHHHHHHHHHHHHHhccc-cccccccccchHHHHHHHHHHHH
Q 019439          164 RPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILEL-KSLESVEWSTNILLGFAGYAASS  242 (341)
Q Consensus       164 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  242 (341)
                      +...|+++++.|-+.|+..-.+.|-. +..++.++..+..+++.++.......... .+..+.--++.....+.....-.
T Consensus         4 ~~~~Gil~~l~Ay~lwG~lp~y~kll-~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li   82 (293)
T COG2962           4 DSRKGILLALLAYLLWGLLPLYFKLL-EPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI   82 (293)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHHH-ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH
Confidence            34579999999999999999988665 78899999999999998888755444332 23222111222222222222234


Q ss_pred             HHHHHHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeec
Q 019439          243 FMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYST  304 (341)
Q Consensus       243 ~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  304 (341)
                      ......+.++.++..+..+++-+++.|++.+++|.+++||+++..|++...+..+|+.....
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~  144 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTW  144 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence            44567788899999999999999999999999999999999999999999999999887654

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.22  E-value=1.2e-05  Score=61.85  Aligned_cols=72  Identities=24%  Similarity=0.285  Sum_probs=63.1

Q ss_pred             HHHHHHHHHHH-HHHHHHhhhccchhHHHHhhhchHHHHHHHHHH--HhhcccchhhHHHHHHHHHhhHHHhhcC
Q 019439           84 YLLLGFVDVQG-NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWL--FLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (341)
Q Consensus        84 ~~~~g~~~~~~-~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l--~l~e~~~~~~~ig~~l~~~Gv~l~~~~~  155 (341)
                      ++..|+..... ..++.++++..|++.+.++.+..++++.+.++.  ++||++++.+++|++++++|+.++...+
T Consensus        50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            45667666666 779999999999999999999999888888885  7999999999999999999999987643

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=97.91  E-value=0.00036  Score=58.54  Aligned_cols=131  Identities=15%  Similarity=-0.021  Sum_probs=96.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhhhh-h--HHHHHHHHHHHHHHHH-HH
Q 019439           21 YLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRL-R--VAWYWYLLLGFVDVQG-NF   96 (341)
Q Consensus        21 ~g~~~~~~~al~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~-~--~~~~~~~~~g~~~~~~-~~   96 (341)
                      .|..+++....||++..+..+-..+  ..+--.-+..-+..++++.+|+-..+-... .  .-...-+..|++.... +.
T Consensus       148 ~Gv~~Al~AG~~Wa~YIv~G~r~g~--~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalPYs  225 (292)
T COG5006         148 VGVALALGAGACWALYIVLGQRAGR--AEHGTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALPYS  225 (292)
T ss_pred             HHHHHHHHHhHHHHHHHHHcchhcc--cCCCchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccchH
Confidence            4666667777777776666665543  333344455677888988888866443221 1  1123345567777777 56


Q ss_pred             HHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhh
Q 019439           97 LVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLL  153 (341)
Q Consensus        97 ~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~  153 (341)
                      +-..++...|..+..++.++.|.+.++.++++++|.++..||.++...+.+..-...
T Consensus       226 LEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~l  282 (292)
T COG5006         226 LEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTL  282 (292)
T ss_pred             HHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccc
Confidence            889999999999999999999999999999999999999999999988887764443

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.91  E-value=7.1e-05  Score=56.46  Aligned_cols=68  Identities=15%  Similarity=0.110  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHHHhhhccchhHHHHhh-hchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcC
Q 019439           88 GFVDVQGNFLVNKAYQFSSITSVTLLD-CCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (341)
Q Consensus        88 g~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~  155 (341)
                      -++.....+++..++++.|.+.+..+. ....+.+.+++.++++|++++.+++|+.+.++|+..+-..+
T Consensus        37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            334444477999999999999998774 78999999999999999999999999999999999886544

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.89  E-value=0.00012  Score=55.19  Aligned_cols=63  Identities=11%  Similarity=0.270  Sum_probs=49.8

Q ss_pred             HHHHHHHHHHhhhhhhHH-HhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeeccc
Q 019439          244 MFYTLAPFVLKLSGATMF-NLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTE  306 (341)
Q Consensus       244 ~~~~~~~~~~~~~~a~~~-~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  306 (341)
                      .++.++..++++.+..++ ++..-+..+.+.+++++++||++++.+++|+.+|++|++..+...
T Consensus        42 ~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         42 LSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            336777888988665443 333345668889999999999999999999999999999886544

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.89  E-value=0.00034  Score=51.04  Aligned_cols=65  Identities=22%  Similarity=0.184  Sum_probs=56.5

Q ss_pred             HHHHHHHHHHHhhhccchhHHHHh-hhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhc
Q 019439           90 VDVQGNFLVNKAYQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLS  154 (341)
Q Consensus        90 ~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~  154 (341)
                      ......++...++++.|.+.+..+ ...-.+.+++.++++++|+++..+++++.+.++|++.+-..
T Consensus        39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            334447789999999999999654 68888899999999999999999999999999999987654

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.84  E-value=0.00059  Score=61.20  Aligned_cols=140  Identities=11%  Similarity=0.050  Sum_probs=89.2

Q ss_pred             hHHhHHHHHHHHHHHHHHHHHHHHhhc-CC-chhhhHHhHHHHHHHHHHHHHhccccc--cccccccchHHHHHHHHHHH
Q 019439          166 LLGDVLVIAGTIFFATSNVGEEFFVKK-KD-RVEVVCMIGVYGLLVSAVQLSILELKS--LESVEWSTNILLGFAGYAAS  241 (341)
Q Consensus       166 ~~G~~~~l~a~~~~a~~~v~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  241 (341)
                      +.+.+++-.-+++-+..++.+....++ .+ |....+..+..-.++.. +...+....  ........++.-.++  ++.
T Consensus        12 ~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~-~~~~~r~~~~~~~~~~~~~~w~y~ll--a~~   88 (334)
T PF06027_consen   12 WIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYT-PILLYRRGFKKWLKVLKRPWWKYFLL--ALL   88 (334)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHh-hhhhhccccccchhhcchhHHHHHHH--HHH
Confidence            445555555566666666666555443 22 33333333333333332 222232221  111111222222222  335


Q ss_pred             HHHHHHHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeeccccC
Q 019439          242 SFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKD  308 (341)
Q Consensus       242 ~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~  308 (341)
                      -+.++.+...+.++++.+.+.+......++++++++++++|+.++.+++|+.+.++|+.+....+..
T Consensus        89 Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~  155 (334)
T PF06027_consen   89 DVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVL  155 (334)
T ss_pred             HHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccc
Confidence            5666888899999999999999999899999999999999999999999999999999988776543

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.82  E-value=0.00075  Score=50.01  Aligned_cols=64  Identities=16%  Similarity=0.221  Sum_probs=55.3

Q ss_pred             HHHHHHHHHHHHhhhccchhHHHHh-hhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHh
Q 019439           89 FVDVQGNFLVNKAYQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVL  152 (341)
Q Consensus        89 ~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~  152 (341)
                      +......++...++++.|.+.+..+ .....+.+.+.+.+++||++++.+++++.+.+.|++.+-
T Consensus        43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            3344447788999999999999755 568889999999999999999999999999999998863

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.80  E-value=0.00051  Score=51.12  Aligned_cols=66  Identities=18%  Similarity=0.310  Sum_probs=57.5

Q ss_pred             HHHHHH-HHHHHHhhhccchhHHHHh-hhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhc
Q 019439           89 FVDVQG-NFLVNKAYQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLS  154 (341)
Q Consensus        89 ~~~~~~-~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~  154 (341)
                      +..... .+++..+++..|.+.+..+ .....+.+.+++++++||++++.+++|+.+.++|++++...
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            344444 6688999999999999877 56889999999999999999999999999999999998654

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.75  E-value=0.00065  Score=58.62  Aligned_cols=129  Identities=10%  Similarity=0.000  Sum_probs=85.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHH-hhhhhhHHHHHHHHHHHHHHHHH
Q 019439           17 LRTLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLY-RRQRLRVAWYWYLLLGFVDVQGN   95 (341)
Q Consensus        17 ~~~~~g~~~~~~~al~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~   95 (341)
                      +...|+++..++..+.........+.    ...+|+...+-......+.-..+... +++..++..++-++.|++...++
T Consensus       134 ~~~~kgi~~Ll~stigy~~Y~~~~~~----~~~~~~~~~lPqaiGm~i~a~i~~~~~~~~~~~k~~~~nil~G~~w~ign  209 (269)
T PF06800_consen  134 SNMKKGILALLISTIGYWIYSVIPKA----FHVSGWSAFLPQAIGMLIGAFIFNLFSKKPFFEKKSWKNILTGLIWGIGN  209 (269)
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHh----cCCChhHhHHHHHHHHHHHHHHHhhcccccccccchHHhhHHHHHHHHHH
Confidence            34556776644444444433333333    45566666654443333322222222 23333444566688999999999


Q ss_pred             HHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHH----HHHHHHHhhH
Q 019439           96 FLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLL----GAALCVLGLG  149 (341)
Q Consensus        96 ~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~i----g~~l~~~Gv~  149 (341)
                      .+++.|.+....+.+..+.++.++...+-+.+++||+-+++++.    |+++.++|.+
T Consensus       210 l~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  210 LFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             HHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            99999999999999999999999999999999999998888664    4444444443

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.75  E-value=0.00025  Score=52.27  Aligned_cols=64  Identities=20%  Similarity=0.098  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHHhhhccchhHHHHh-hhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhh
Q 019439           90 VDVQGNFLVNKAYQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLL  153 (341)
Q Consensus        90 ~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~  153 (341)
                      +.....++...+++..|.+.+..+ .....+.+.+++.+++||++++.+++++.+.++|++.+..
T Consensus        38 ~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         38 AMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            334447788999999999999755 5688999999999999999999999999999999998754

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.74  E-value=0.0025  Score=56.97  Aligned_cols=134  Identities=15%  Similarity=0.115  Sum_probs=102.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHH--hhh---------hhhHHHHHHHHHHHH
Q 019439           22 LLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLY--RRQ---------RLRVAWYWYLLLGFV   90 (341)
Q Consensus        22 g~~~~~~~al~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~--~~~---------~~~~~~~~~~~~g~~   90 (341)
                      |+++..+..++-+..+.....+.++...+++...++....+.+.+......  ..+         ..+..+...+..++.
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~  234 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT  234 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence            777766666666666666666655555677888887777777766655544  221         112235666777777


Q ss_pred             HHHHHHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcC
Q 019439           91 DVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (341)
Q Consensus        91 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~  155 (341)
                      +..++.+.+...+..++...+++..+.-+++.+++.+++++++++.+|+|+++.+.|..+-...+
T Consensus       235 ~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~  299 (303)
T PF08449_consen  235 GALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAK  299 (303)
T ss_pred             HHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhh
Confidence            88887777788899999999999999999999999999999999999999999999999887654

; GO: 0055085 transmembrane transport

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=97.74  E-value=0.00029  Score=62.58  Aligned_cols=122  Identities=12%  Similarity=0.077  Sum_probs=83.5

Q ss_pred             CcchHHhHHHHHHHHHHHHHHHHHHHHhhcCCchhhhHHhHHHHHHHHHHHHHhccccccccccccchHHHHHHHHHHHH
Q 019439          163 SRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASS  242 (341)
Q Consensus       163 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (341)
                      .+...|..+++.++++.+....++|+...+.+....-.                  .....+.--...++......+   
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~------------------~~~~~~~l~~~~W~~G~~~~~---   61 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRA------------------GSGGRSYLRRPLWWIGLLLMV---   61 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc------------------cchhhHHHhhHHHHHHHHHHh---
Confidence            34678999999999999999999999865543311000                  000000000111222221111   


Q ss_pred             HHHHHHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeeccc
Q 019439          243 FMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTE  306 (341)
Q Consensus       243 ~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  306 (341)
                       ....+...++...+++..+....+..++..+++..++||+++..++.|+++++.|..+.....
T Consensus        62 -~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~  124 (300)
T PF05653_consen   62 -LGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA  124 (300)
T ss_pred             -cchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence             223555678888888888888888889999999999999999999999999999988766543

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.65  E-value=0.00021  Score=53.23  Aligned_cols=63  Identities=10%  Similarity=0.167  Sum_probs=49.2

Q ss_pred             HHHHHHHHHHhhhhhhH-HHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeeccc
Q 019439          244 MFYTLAPFVLKLSGATM-FNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTE  306 (341)
Q Consensus       244 ~~~~~~~~~~~~~~a~~-~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  306 (341)
                      .++.++..++++.+..+ .++-.-+..+.+.++++++|||++++.+++|+.+|++|+++.+...
T Consensus        42 ~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         42 ASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            33666778888866543 3333445568889999999999999999999999999999986544

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.55  E-value=0.0022  Score=50.05  Aligned_cols=130  Identities=12%  Similarity=0.078  Sum_probs=88.3

Q ss_pred             HhHHHHHHHHHHHHHHHHHHHHhhcCC-chhhhHHhHHHHHHHHHHHHHhcccccccccc-ccchHHHHHHHHHHHHHHH
Q 019439          168 GDVLVIAGTIFFATSNVGEEFFVKKKD-RVEVVCMIGVYGLLVSAVQLSILELKSLESVE-WSTNILLGFAGYAASSFMF  245 (341)
Q Consensus       168 G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  245 (341)
                      ..++++.++.+-++...++.+..++.. |....+..+..+.+...+.....+..+.+... .++|.  ..-|.. .... 
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~--~lGG~l-G~~~-   77 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWA--YLGGLL-GVFF-   77 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHH--hccHHH-HHHH-
Confidence            357889999999999999999988865 99988999899988887666665554333221 11111  112221 2222 


Q ss_pred             HHHHHHHHhhhhhhHHHh-hhhhhHHHHHHHHHH----HhccccchhhhhHHhhheeeeee
Q 019439          246 YTLAPFVLKLSGATMFNL-SLLTADMWAVVFRIC----FYHQKVDWLYFLAFGIVVIGLII  301 (341)
Q Consensus       246 ~~~~~~~~~~~~a~~~~~-~~~~~pv~~~l~~~~----~~~e~~~~~~~~G~~li~~g~~l  301 (341)
                      -.+.....++.++..... ...-+-+.+.+++.+    .-++++++.+++|.+++++|+++
T Consensus        78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            344556777777665444 444567788888885    23467899999999999999764

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=97.53  E-value=0.057  Score=47.97  Aligned_cols=253  Identities=12%  Similarity=0.140  Sum_probs=144.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHh----------hhhhhHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHH-HhhhchHH
Q 019439           51 PVTQSAFAYFSLALVYGGVLLYR----------RQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVT-LLDCCTIA  119 (341)
Q Consensus        51 p~~~~~~r~~~~~l~l~~~~~~~----------~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~-~l~~~~pi  119 (341)
                      .|+..+.-..+..-+..|+...-          ++.+........+.|++..++...|-.+++|...+..+ +...+..+
T Consensus        33 sWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~  112 (344)
T PF06379_consen   33 SWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAV  112 (344)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHH
Confidence            45555544444444444544321          12334456677889999999999999999999999885 66788888


Q ss_pred             HHHHHHHHHhhc-------ccchhhHHHHHHHHHhhHHHhhcCCC------CCCCCCcchHHhHHHHHHHHHHHHHHHHH
Q 019439          120 WAIVLTWLFLGT-------RYSLWQLLGAALCVLGLGLVLLSDAG------GDGGGSRPLLGDVLVIAGTIFFATSNVGE  186 (341)
Q Consensus       120 ~~~ll~~l~l~e-------~~~~~~~ig~~l~~~Gv~l~~~~~~~------~~~~~~~~~~G~~~~l~a~~~~a~~~v~~  186 (341)
                      +-.++-.++.++       +-....++|++++++|+.+....+..      ++..+.+..+|+++++.+++..|+.++-.
T Consensus       113 ~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~  192 (344)
T PF06379_consen  113 FGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGL  192 (344)
T ss_pred             HhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence            888887776442       23457889999999999999765431      11223345689999999999999998876


Q ss_pred             HHHhh--------cCCchh----hhHHhHHHHHHHHHHHHHhc--ccccc---ccccc-cch-H-HHHHHHHH-HHHHHH
Q 019439          187 EFFVK--------KKDRVE----VVCMIGVYGLLVSAVQLSIL--ELKSL---ESVEW-STN-I-LLGFAGYA-ASSFMF  245 (341)
Q Consensus       187 ~~~~~--------~~~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~-~~~-~-~~~~~~~~-~~~~~~  245 (341)
                      +.-..        ..+|..    ........+.+..+......  ..++.   .+.+. +.. . ...+.... ..-+.+
T Consensus       193 ~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy~q  272 (344)
T PF06379_consen  193 DAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWYSQ  272 (344)
T ss_pred             HcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHHHHHH
Confidence            54311        012211    22233444545554333221  11111   11111 111 1 11111111 122222


Q ss_pred             HHHHHHHHhhhhh----hHHHhhhhhhHHHHHHHHHHHhccc------cchhhhhHHhhheeeeeeeec
Q 019439          246 YTLAPFVLKLSGA----TMFNLSLLTADMWAVVFRICFYHQK------VDWLYFLAFGIVVIGLIIYST  304 (341)
Q Consensus       246 ~~~~~~~~~~~~a----~~~~~~~~~~pv~~~l~~~~~~~e~------~~~~~~~G~~li~~g~~l~~~  304 (341)
                      +..+-.+-.+.++    .--.+.+....+++-++|++ ++|-      .-...++|.++++.++.+.-+
T Consensus       273 fffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~-lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~  340 (344)
T PF06379_consen  273 FFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLI-LKEWKGASKKTIRVLVLGIAVLILSVVIVGY  340 (344)
T ss_pred             HHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHH-HHHhccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence            2333333334443    23334555666888888865 5663      233557788888777665543

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.50  E-value=0.00038  Score=50.75  Aligned_cols=60  Identities=10%  Similarity=0.195  Sum_probs=49.6

Q ss_pred             HHHHHHHHhhhhhh-HHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeecc
Q 019439          246 YTLAPFVLKLSGAT-MFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTT  305 (341)
Q Consensus       246 ~~~~~~~~~~~~a~-~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  305 (341)
                      |.+...++|+.+.. ..++-.-+..+.+.+.|+++|||+.+..+++|..++++|++..+..
T Consensus        44 f~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          44 FYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            67778899986643 4455555667889999999999999999999999999999987654

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.43  E-value=0.0014  Score=48.60  Aligned_cols=58  Identities=7%  Similarity=0.099  Sum_probs=46.8

Q ss_pred             HHHHHHHHhhhhhh-HHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeee
Q 019439          246 YTLAPFVLKLSGAT-MFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYS  303 (341)
Q Consensus       246 ~~~~~~~~~~~~a~-~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~  303 (341)
                      +.+...++|+.+.. ..++-.-+..+.+.+.+++++||++++.+++|+.+|+.|++..+
T Consensus        49 f~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         49 FSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            66777888886654 34444445668889999999999999999999999999998764

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.40  E-value=0.00073  Score=49.80  Aligned_cols=61  Identities=13%  Similarity=0.146  Sum_probs=48.5

Q ss_pred             HHHHHHHHHhhhhhh-HHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeecc
Q 019439          245 FYTLAPFVLKLSGAT-MFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTT  305 (341)
Q Consensus       245 ~~~~~~~~~~~~~a~-~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  305 (341)
                      ++.+...++|+.+.. ..++-.-+..+.+.+.|++++||++++.+++|+.++++|++..+..
T Consensus        42 sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~  103 (105)
T PRK11431         42 SMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLS  103 (105)
T ss_pred             HHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence            366677788886643 3444444566889999999999999999999999999999987543

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.39  E-value=0.008  Score=46.89  Aligned_cols=126  Identities=18%  Similarity=0.160  Sum_probs=87.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhhh----hhHHHHHHHHHHHHHHHHHHHHH
Q 019439           24 FLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQR----LRVAWYWYLLLGFVDVQGNFLVN   99 (341)
Q Consensus        24 ~~~~~~al~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~   99 (341)
                      +++.....+.+.....+..+.++-. +|+..++..+....+.+..+....++.    .++..++....|+++...-.+..
T Consensus         4 lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~lGG~lG~~~V~~~~   82 (138)
T PF04657_consen    4 LLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYLGGLLGVFFVLSNI   82 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhccHHHHHHHHHHHH
Confidence            3444445555555666666655322 689999999988888777666544432    11122334558888888888889


Q ss_pred             HhhhccchhHHHHhh-hchHHHHHHHHHH----HhhcccchhhHHHHHHHHHhhHH
Q 019439          100 KAYQFSSITSVTLLD-CCTIAWAIVLTWL----FLGTRYSLWQLLGAALCVLGLGL  150 (341)
Q Consensus       100 ~al~~~~~~~~~~l~-~~~pi~~~ll~~l----~l~e~~~~~~~ig~~l~~~Gv~l  150 (341)
                      ...+..+++.+..+. .-+.+...++..+    .-++++++.+.+|+.+.++|+.+
T Consensus        83 ~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   83 ILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            999999999887554 4455667777775    34789999999999999999864

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.31  E-value=0.00034  Score=59.16  Aligned_cols=135  Identities=17%  Similarity=0.275  Sum_probs=88.0

Q ss_pred             cchHHhHHHHHHHHHHHHHHHHHHHHhhcCCchhhhHHhHHHHHHHHHHHHHhcccccc-cccc-ccchHHHHHHHHHHH
Q 019439          164 RPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSL-ESVE-WSTNILLGFAGYAAS  241 (341)
Q Consensus       164 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~  241 (341)
                      .+.+|..+..++ ..+....+..++... .+|.+......+.-.++.. +..++..... .+.. -.+...=.++|.. +
T Consensus        35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e-~~p~e~a~~r~l~~mlit~-pcliy~~~~v~gp~g~R~~LiLRg~mG~t-g  110 (346)
T KOG4510|consen   35 KPNLGLLLLTVS-YFFNSCMVVSTKVLE-NDPMELASFRLLVRMLITY-PCLIYYMQPVIGPEGKRKWLILRGFMGFT-G  110 (346)
T ss_pred             CCccCceehhhH-HHHhhHHHhhhhhhc-cChhHhhhhhhhhehhhhh-eEEEEEeeeeecCCCcEEEEEeehhhhhh-H
Confidence            456788888888 667777777777644 4555554444444434332 2222221111 1100 1111112223333 2


Q ss_pred             HHHHHHHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeeccc
Q 019439          242 SFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTE  306 (341)
Q Consensus       242 ~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  306 (341)
                          ..+.++++++.+-+.+.++....|+++.++++.+++|+.+..+.+|..+.+.|+++..+.+
T Consensus       111 ----vmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp  171 (346)
T KOG4510|consen  111 ----VMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP  171 (346)
T ss_pred             ----HHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence                2334568888888888999999999999999999999999999999999999999998755

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.25  E-value=0.0058  Score=47.72  Aligned_cols=137  Identities=10%  Similarity=0.052  Sum_probs=84.9

Q ss_pred             hHHhHHHHHHHHHHHHHHHHHHHHhhcCC-chhhhHHhHHHHHHHHHHHHHhccccccccccccchHHHHHHHHHHHHHH
Q 019439          166 LLGDVLVIAGTIFFATSNVGEEFFVKKKD-RVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFM  244 (341)
Q Consensus       166 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (341)
                      ....+.+++++.+.....-.+.++.+..+ |....+..+..|++.......+.+.........+..++...-|.. ..+.
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~l-Ga~~   82 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLL-GAIF   82 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccch-hhhh
Confidence            45678889999999999999988877755 777777777887777765555543332222212222222222222 2111


Q ss_pred             HHHHHHHHHhhhhhh-HHHhhhhhhHHHHHHHHHHHhc----cccchhhhhHHhhheeeeeeeec
Q 019439          245 FYTLAPFVLKLSGAT-MFNLSLLTADMWAVVFRICFYH----QKVDWLYFLAFGIVVIGLIIYST  304 (341)
Q Consensus       245 ~~~~~~~~~~~~~a~-~~~~~~~~~pv~~~l~~~~~~~----e~~~~~~~~G~~li~~g~~l~~~  304 (341)
                       -........+.+++ .......-+-+.+.+++.+=+.    .+++..+++|.+++++|+++.+.
T Consensus        83 -vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~  146 (150)
T COG3238          83 -VTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR  146 (150)
T ss_pred             -hhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence             12223344455544 4444555666788888876443    56899999999999999665543

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.21  E-value=0.0039  Score=45.08  Aligned_cols=54  Identities=17%  Similarity=0.171  Sum_probs=32.0

Q ss_pred             HHHHHHHHHHhhhccchhHHHHh-hhchHHHHHHHHHHHhhcccchhhHHHHHHH
Q 019439           91 DVQGNFLVNKAYQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRYSLWQLLGAALC  144 (341)
Q Consensus        91 ~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~  144 (341)
                      .....+++..++++.|.+.+..+ ..+..+.+.+.+.+++||++|..+++|+.+.
T Consensus        39 ~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   39 YGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            33346789999999999999766 5699999999999999999999999998763

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=97.11  E-value=0.0014  Score=56.27  Aligned_cols=131  Identities=20%  Similarity=0.205  Sum_probs=74.8

Q ss_pred             HhHHHHHHHHHHHHHHHHHHHHhhcCCchhhhHHhHHHHHHHHHHHHHhccccccccccccchHHHHHHHHHHHHHHHHH
Q 019439          168 GDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYT  247 (341)
Q Consensus       168 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (341)
                      |++..+.|+++++...+=.|+. +..|++.+++++.....+...+.....+.+.+     .++..+.-...+..    +.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~-~~gDg~~fQw~~~~~i~~~g~~v~~~~~~p~f-----~p~amlgG~lW~~g----N~   70 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKF-DTGDGFFFQWVMCSGIFLVGLVVNLILGFPPF-----YPWAMLGGALWATG----NI   70 (254)
T ss_pred             CchhHHHHHHHhcccceeeEec-cCCCcHHHHHHHHHHHHHHHHHHHHhcCCCcc-----eeHHHhhhhhhhcC----ce
Confidence            5677888999999888877776 45688888887766666666544444332221     22221111111111    23


Q ss_pred             HHHHHHhhhhhhHHHh-hhhhhHHHHHHHHHH-Hhcccc-----chhhhhHHhhheeeeeeeeccccC
Q 019439          248 LAPFVLKLSGATMFNL-SLLTADMWAVVFRIC-FYHQKV-----DWLYFLAFGIVVIGLIIYSTTEKD  308 (341)
Q Consensus       248 ~~~~~~~~~~a~~~~~-~~~~~pv~~~l~~~~-~~~e~~-----~~~~~~G~~li~~g~~l~~~~~~~  308 (341)
                      +..-.++..+-...-. -....-+.+...+.+ +||+++     ....++|++++++|..++..-+.+
T Consensus        71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~  138 (254)
T PF07857_consen   71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSE  138 (254)
T ss_pred             eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCC
Confidence            3344555555433332 222344556666544 565443     458899999999998888754433

The region concerned is approximately 280 residues long.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.10  E-value=0.0026  Score=54.78  Aligned_cols=69  Identities=12%  Similarity=0.218  Sum_probs=61.3

Q ss_pred             HHHHHHHHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeeccccCC
Q 019439          241 SSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDL  309 (341)
Q Consensus       241 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~  309 (341)
                      .....+.+.+.++++.++.+..+....+.+++.++++++++++++..||++..++.+|+.+.+......
T Consensus        26 lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~   94 (244)
T PF04142_consen   26 LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS   94 (244)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence            344456777889999999999999999999999999999999999999999999999999988766544

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=97.04  E-value=0.0012  Score=49.07  Aligned_cols=68  Identities=18%  Similarity=0.298  Sum_probs=57.8

Q ss_pred             HHHHHHHHHHHHHHHHHhhhccchhHHHHh-hhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHH
Q 019439           84 YLLLGFVDVQGNFLVNKAYQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLV  151 (341)
Q Consensus        84 ~~~~g~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~  151 (341)
                      +.+.=+++..++..|++.+...|.|.+.++ +++.-++|++.++++.+|..++++++|+.+.+.|+.+.
T Consensus        44 y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   44 YIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            444445666679999999999999999988 58899999999998878888999999999999998753

Many members are annotated as potential transmembrane proteins.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.86  E-value=0.013  Score=42.38  Aligned_cols=53  Identities=9%  Similarity=0.144  Sum_probs=29.2

Q ss_pred             HHHHHHHHHHHhhhhhhHH-HhhhhhhHHHHHHHHHHHhccccchhhhhHHhhh
Q 019439          243 FMFYTLAPFVLKLSGATMF-NLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIV  295 (341)
Q Consensus       243 ~~~~~~~~~~~~~~~a~~~-~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li  295 (341)
                      ...+.++..++++.+..++ ++..-+..+...+.|++++||++|..+++|..+|
T Consensus        40 ~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   40 GLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            3346778889999776554 4444467789999999999999999999999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.80  E-value=0.0082  Score=54.03  Aligned_cols=144  Identities=13%  Similarity=0.065  Sum_probs=85.0

Q ss_pred             cchHHhHHHHHHHHHHHHHHHHHHHHhhcCCchhhhHHhHHHHHHHHHHHHHhcccc----ccccccccchHHHHHHHHH
Q 019439          164 RPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELK----SLESVEWSTNILLGFAGYA  239 (341)
Q Consensus       164 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~  239 (341)
                      +...|+++.+++++|++.+.+-.|+ .++-+=..+-....+...++..........+    ...+.+........+.|..
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~~   82 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VKKWSWETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGAL   82 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHHH
Confidence            4668999999999999999998888 3544322221111111111111001111111    1122222333333333332


Q ss_pred             HHHHHHHHHHHHHHhhhhhhH-HHhhhhhhHHHHHHHHHHHhcccc-------chhhhhHHhhheeeeeeeeccccCCC
Q 019439          240 ASSFMFYTLAPFVLKLSGATM-FNLSLLTADMWAVVFRICFYHQKV-------DWLYFLAFGIVVIGLIIYSTTEKDLN  310 (341)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~a~~-~~~~~~~~pv~~~l~~~~~~~e~~-------~~~~~~G~~li~~g~~l~~~~~~~~~  310 (341)
                       =.+ .+..+..++++.+.+. .++..-++-+.+.+++.+++||-.       ....++|.+++++|+++..+..++++
T Consensus        83 -W~i-G~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~  159 (345)
T PRK13499         83 -WGI-GGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKE  159 (345)
T ss_pred             -HHh-hhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence             222 3577788999977654 455555777899999999999754       23577899999999999988544443

>TIGR00803 nst UDP-galactose transporter

Probab=96.60  E-value=0.022  Score=48.44  Aligned_cols=66  Identities=18%  Similarity=0.308  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHH
Q 019439           85 LLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGL  150 (341)
Q Consensus        85 ~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l  150 (341)
                      ....+.......+....++|.+....++...+.++++.+++.++++|+++..+++|..+.+.|+.+
T Consensus       156 ~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       156 WIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            344445555567788999999999999999999999999999999999999999999999988653

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.48  E-value=0.02  Score=42.56  Aligned_cols=109  Identities=8%  Similarity=0.010  Sum_probs=65.7

Q ss_pred             HHHHHHHHHHHHHHHHhhcCCchhhhHHhHHHHHHHHHHHHHhccccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 019439          174 AGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYTLAPFVL  253 (341)
Q Consensus       174 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (341)
                      +.+++|++.+-+.|+..+..++..-.. +..-.....     +        .+|+.....+.-..  +    -..++..+
T Consensus         3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~~-~~~~~~~~L-----l--------~n~~y~ipf~lNq~--G----Sv~f~~~L   62 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGSSGLEKVKASL-QLLQEIKFL-----L--------LNPKYIIPFLLNQS--G----SVLFFLLL   62 (113)
T ss_pred             eehHHhcCchHHHHHHHhhcCCccchH-HHHHHHHHH-----H--------HhHHHHHHHHHHHH--H----HHHHHHHH
Confidence            457889999999999977654444321 111111110     0        11233332222122  2    24445566


Q ss_pred             hhhhhh-HHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeee
Q 019439          254 KLSGAT-MFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIY  302 (341)
Q Consensus       254 ~~~~a~-~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~  302 (341)
                      .+.+-+ .+.+.+.+.=+++.+.++++.+|..+...++|++++++|+.+.
T Consensus        63 ~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   63 GSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             hcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            665543 3344445566899999988888888889999999999999874

Many members are annotated as potential transmembrane proteins.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=96.46  E-value=0.011  Score=52.54  Aligned_cols=136  Identities=16%  Similarity=0.146  Sum_probs=94.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCchHHHHHHHHHHHHHHHH-HHHHHhhh---------hhhHHHHHHHHH
Q 019439           20 LYLLFLGQLVSFTLALMSFTSSLIAD--LGVDAPVTQSAFAYFSLALVYG-GVLLYRRQ---------RLRVAWYWYLLL   87 (341)
Q Consensus        20 ~~g~~~~~~~al~~~~~~~~~~~l~~--~~~~~p~~~~~~r~~~~~l~l~-~~~~~~~~---------~~~~~~~~~~~~   87 (341)
                      +.|.+.+....+..+.-....+.+.+  ....++........-++..+++ |+......         ...-.....+..
T Consensus       162 ~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (316)
T KOG1441|consen  162 LFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLN  241 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHH
Confidence            44555555444444444555554442  2345567666655556666666 76543221         111123334444


Q ss_pred             HHHHHHHHHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcC
Q 019439           88 GFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (341)
Q Consensus        88 g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~  155 (341)
                      +++....|...|..+..+++-+.++...+.-+++...+++++++++++.+..|..++++|+.+-....
T Consensus       242 sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k  309 (316)
T KOG1441|consen  242 SVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAK  309 (316)
T ss_pred             HHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHh
Confidence            56777778899999999999999999999999999999999999999999999999999999877643

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=96.16  E-value=0.062  Score=48.09  Aligned_cols=140  Identities=19%  Similarity=0.150  Sum_probs=103.9

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-cC-CCc-hHHHHHHHHHHHHHHHHHHHH----Hhhhh----hhHHHHHH
Q 019439           16 TLRTLYLLFLGQLVSFTLALMSFTSSLIAD-LG-VDA-PVTQSAFAYFSLALVYGGVLL----YRRQR----LRVAWYWY   84 (341)
Q Consensus        16 ~~~~~~g~~~~~~~al~~~~~~~~~~~l~~-~~-~~~-p~~~~~~r~~~~~l~l~~~~~----~~~~~----~~~~~~~~   84 (341)
                      -+|.+.|-+++++.|++.+......+.-.. .| ..+ +..+.+.. ++..++++|...    .+..+    ...+...+
T Consensus       242 a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvG-LfnllllwP~l~iL~~~~~e~F~lP~~~q~~~v  320 (416)
T KOG2765|consen  242 ASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVG-LFNLLLLWPPLIILDFFGEERFELPSSTQFSLV  320 (416)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHH-HHHHHHHhHHHHHHHHhccCcccCCCCceeEee
Confidence            457788999999999998888777765533 32 333 44444433 445555554433    11111    12234456


Q ss_pred             HHHHHHHHHH-HHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcCC
Q 019439           85 LLLGFVDVQG-NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSDA  156 (341)
Q Consensus        85 ~~~g~~~~~~-~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~~  156 (341)
                      +..++++.+. .+++..|.-.+++-.+++-..++....++...++.++++++..++|....++|-+++...+.
T Consensus       321 v~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  321 VFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             eHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence            6778888887 99999999999999999999999999999999999999999999999999999999887654

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=95.96  E-value=0.12  Score=44.93  Aligned_cols=120  Identities=15%  Similarity=0.084  Sum_probs=86.6

Q ss_pred             HHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhh---------hhhhHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 019439           36 MSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRR---------QRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSS  106 (341)
Q Consensus        36 ~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~  106 (341)
                      ++.....+.++-..+++.+.+.-.+..++.-........         +..+.-++..++.+.++.+++.+.++-++.-+
T Consensus       187 Tn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FG  266 (327)
T KOG1581|consen  187 TNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFG  266 (327)
T ss_pred             HHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcc
Confidence            333333444444556666666555555544333333222         22344478889999999999888888888877


Q ss_pred             hhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcC
Q 019439          107 ITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (341)
Q Consensus       107 ~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~  155 (341)
                      +-.-+.+..+.-+++.+++.+.++++++..||.|+.+.+.|+.+=....
T Consensus       267 slt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k  315 (327)
T KOG1581|consen  267 SLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLK  315 (327)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHH
Confidence            7777778888999999999999999999999999999999988766543

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=95.87  E-value=0.11  Score=43.60  Aligned_cols=79  Identities=15%  Similarity=0.212  Sum_probs=69.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcC
Q 019439           77 LRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (341)
Q Consensus        77 ~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~  155 (341)
                      .+..|+.+.+.++++..++++.+.-..+-++-.-+++..+.-+|+.+.+.++++.+++.+||+|.++.+.|...-...+
T Consensus       237 hP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~G  315 (337)
T KOG1580|consen  237 HPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDG  315 (337)
T ss_pred             ccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcC
Confidence            3445788889999999999999999999888888999999999999999999999999999999999999987766544

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.84  E-value=0.54  Score=36.90  Aligned_cols=131  Identities=15%  Similarity=0.126  Sum_probs=83.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhhhh-----hHHHHHHHHHHHHHHHHH
Q 019439           21 YLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRL-----RVAWYWYLLLGFVDVQGN   95 (341)
Q Consensus        21 ~g~~~~~~~al~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~~   95 (341)
                      ..++++.....+....+..+.-+.+... +|..-.+..+.....++..+.+.+.+.+     ++..++....|+++...-
T Consensus         5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~~v   83 (150)
T COG3238           5 LYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAIFV   83 (150)
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhhhh
Confidence            3456666666666666666666665433 6888888888887777776665533221     122333455666666665


Q ss_pred             HHHHHhhhccchhHHH-HhhhchHHHHHHHHHHHh----hcccchhhHHHHHHHHHhhHHHh
Q 019439           96 FLVNKAYQFSSITSVT-LLDCCTIAWAIVLTWLFL----GTRYSLWQLLGAALCVLGLGLVL  152 (341)
Q Consensus        96 ~~~~~al~~~~~~~~~-~l~~~~pi~~~ll~~l~l----~e~~~~~~~ig~~l~~~Gv~l~~  152 (341)
                      ..-........++... .+..-+.+...++..+=.    +++++..+++|+++.++|+.++.
T Consensus        84 t~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238          84 TSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             hhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence            5555555555555554 445556666666666533    47899999999999999955443

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=95.36  E-value=0.038  Score=48.42  Aligned_cols=125  Identities=14%  Similarity=0.090  Sum_probs=85.9

Q ss_pred             CCcchHHhHHHHHHHHHHHHHHHHHHHHhhcCCchhhhHHhHHHHHHHHHHHHHhccccc-ccc-ccccchHHHHHHHHH
Q 019439          162 GSRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKS-LES-VEWSTNILLGFAGYA  239 (341)
Q Consensus       162 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~  239 (341)
                      ..+...|..+++.+.+..+...++.|+..++.....                  ...... ... .++.+|.     |..
T Consensus        16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~------------------~ra~~gg~~yl~~~~Ww~-----G~l   72 (335)
T KOG2922|consen   16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGASG------------------LRAGEGGYGYLKEPLWWA-----GML   72 (335)
T ss_pred             ccCceeeeeehhhccEEEeeehhhhHHHHHHHhhhc------------------ccccCCCcchhhhHHHHH-----HHH
Confidence            345568999999999999999999888766532100                  000111 111 1122333     222


Q ss_pred             HHHHHHHHHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeeccccCCC
Q 019439          240 ASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEKDLN  310 (341)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~  310 (341)
                       ++...-...+.+....+++.++..+.++.+.+.+++..+++|+++....+|+++.++|..+......+++
T Consensus        73 -tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~  142 (335)
T KOG2922|consen   73 -TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQ  142 (335)
T ss_pred             -HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccc
Confidence             3333356666777778888888888888999999999999999999999999999998877765444333

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=95.23  E-value=0.011  Score=49.74  Aligned_cols=136  Identities=12%  Similarity=0.092  Sum_probs=84.5

Q ss_pred             HhHHHHHHHHHHHHHHHHHHHHhhcCCchhhhHHhHHHHHHHHHHHHHhccccccccccccchHHHHHHHHHHHHHHHHH
Q 019439          168 GDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLESVEWSTNILLGFAGYAASSFMFYT  247 (341)
Q Consensus       168 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (341)
                      .++++++=++.|+..-....|.  .-+|.+...-+.+.+.++....+. +..+.   .++..+.....-|.. =+++ +.
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~--GG~p~qQ~lGtT~GALifaiiv~~-~~~p~---~T~~~~iv~~isG~~-Ws~G-Q~   74 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKF--GGKPYQQTLGTTLGALIFAIIVFL-FVSPE---LTLTIFIVGFISGAF-WSFG-QA   74 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeec--CCChhHhhhhccHHHHHHHHHHhe-eecCc---cchhhHHHHHHhhhH-hhhh-hh
Confidence            4577888888898877766553  345555555555656555543333 32222   222333322222222 3333 46


Q ss_pred             HHHHHHhhhhhhHH-HhhhhhhHHHHHHHHHHHhccccchhhh----hHHhhheeeeeeeeccccCCCC
Q 019439          248 LAPFVLKLSGATMF-NLSLLTADMWAVVFRICFYHQKVDWLYF----LAFGIVVIGLIIYSTTEKDLNP  311 (341)
Q Consensus       248 ~~~~~~~~~~a~~~-~~~~~~~pv~~~l~~~~~~~e~~~~~~~----~G~~li~~g~~l~~~~~~~~~~  311 (341)
                      ..+.+++..+.+.+ .+.+-.+-+-+.+++++.|||..+..++    +..++++.|+.+..++++.+++
T Consensus        75 ~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~  143 (288)
T COG4975          75 NQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKE  143 (288)
T ss_pred             hhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecccccc
Confidence            67778888776654 4455577788999999999999888554    3567788999998877664433

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=94.03  E-value=0.099  Score=42.50  Aligned_cols=62  Identities=13%  Similarity=0.129  Sum_probs=55.6

Q ss_pred             HHHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeecccc
Q 019439          246 YTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEK  307 (341)
Q Consensus       246 ~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  307 (341)
                      +..|..++++.+++.++......-.+..+++++++|++....+++..++.+.|+++..+.+.
T Consensus        67 NY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN  128 (290)
T KOG4314|consen   67 NYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN  128 (290)
T ss_pred             CcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence            46677899999999988888888899999999999999999999999999999999987654

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=93.83  E-value=0.72  Score=40.66  Aligned_cols=109  Identities=9%  Similarity=-0.013  Sum_probs=81.3

Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHhhh----------hh-hHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhhh
Q 019439           47 GVDAPVTQSAFAYFSLALVYGGVLLYRRQ----------RL-RVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDC  115 (341)
Q Consensus        47 ~~~~p~~~~~~r~~~~~l~l~~~~~~~~~----------~~-~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~  115 (341)
                      +...-+.+.+...+.+.+.+......-..          .. ...+..+.+.|+++++.+++.+.+.+..++...++...
T Consensus       183 ~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~~~SAtT~tivG~  262 (314)
T KOG1444|consen  183 ANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTRVNSATTTTIVGA  262 (314)
T ss_pred             ccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccceeehhh
Confidence            33345556666666666665554432221          01 12245677788888888999999999999999998887


Q ss_pred             chHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcC
Q 019439          116 CTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (341)
Q Consensus       116 ~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~  155 (341)
                      ..-..+.+...++.+++.++...+|+.+.++|-++-....
T Consensus       263 ~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~  302 (314)
T KOG1444|consen  263 KNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYAT  302 (314)
T ss_pred             hhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhh
Confidence            7777788888888899999999999999999998887654

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=93.55  E-value=0.4  Score=42.81  Aligned_cols=146  Identities=14%  Similarity=0.112  Sum_probs=84.1

Q ss_pred             CcchHHhHHHHHHHHHHHHHHHHHHHHhhcCCchhhhHHhHHHHHHHHHHHHHhcccccccc----ccccchHHHHHHHH
Q 019439          163 SRPLLGDVLVIAGTIFFATSNVGEEFFVKKKDRVEVVCMIGVYGLLVSAVQLSILELKSLES----VEWSTNILLGFAGY  238 (341)
Q Consensus       163 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~  238 (341)
                      .....|+++-.+++++.+.+.+=.||. |+-+=..+-..+.+++.++..........++..+    .+.+......+.|+
T Consensus         3 ~~ii~Gii~h~iGg~~~~sfy~P~kkv-k~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~   81 (344)
T PF06379_consen    3 SAIILGIIFHAIGGFASGSFYVPFKKV-KGWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV   81 (344)
T ss_pred             chHHHHHHHHHHHHHHhhhhccchhhc-CCccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence            345789999999999999999988775 4444344444455555555532222333333222    22233333333333


Q ss_pred             HHHHHHHHHHHHHHHhhhhhhH-HHhhhhhhHHHHHHHHHHHhc-------cccchhhhhHHhhheeeeeeeeccccCCC
Q 019439          239 AASSFMFYTLAPFVLKLSGATM-FNLSLLTADMWAVVFRICFYH-------QKVDWLYFLAFGIVVIGLIIYSTTEKDLN  310 (341)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~a~~-~~~~~~~~pv~~~l~~~~~~~-------e~~~~~~~~G~~li~~g~~l~~~~~~~~~  310 (341)
                      . =.++ .+.+-.++|+.+.+. .++..-+.-+++.++--++.|       ++-....++|.++.++|+.+..+....|+
T Consensus        82 l-WGIG-gltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke  159 (344)
T PF06379_consen   82 L-WGIG-GLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKE  159 (344)
T ss_pred             H-Hhcc-hhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhh
Confidence            2 1222 355567888877553 333333444666666555533       22345788999999999999887665444


Q ss_pred             C
Q 019439          311 P  311 (341)
Q Consensus       311 ~  311 (341)
                      +
T Consensus       160 ~  160 (344)
T PF06379_consen  160 K  160 (344)
T ss_pred             h
Confidence            3

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=93.48  E-value=1.9  Score=38.73  Aligned_cols=136  Identities=14%  Similarity=0.061  Sum_probs=82.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhc----CCchhhhHHhHHHHHHHHHHHHHhcccc----cc---ccccccchHHHHHHH
Q 019439          169 DVLVIAGTIFFATSNVGEEFFVKK----KDRVEVVCMIGVYGLLVSAVQLSILELK----SL---ESVEWSTNILLGFAG  237 (341)
Q Consensus       169 ~~~~l~a~~~~a~~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~  237 (341)
                      ....+...+-.+......|...+.    ..|.+..+..-+.-.++.....+..+..    ..   ...-|..+.-..-.+
T Consensus        17 ~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~   96 (345)
T KOG2234|consen   17 YLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVS   96 (345)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHH
Confidence            344444455556666666555333    2344455555555555554333333211    11   111112221111111


Q ss_pred             H-HHHHHHHHHHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeec
Q 019439          238 Y-AASSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYST  304 (341)
Q Consensus       238 ~-~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~  304 (341)
                      + .......+.+...+..+.++++..+...+...-+.++..++++++++..||....+...|+.+.+.
T Consensus        97 vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~  164 (345)
T KOG2234|consen   97 VPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQL  164 (345)
T ss_pred             HHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhc
Confidence            1 112223344666788889999999999999999999999999999999999999999999999883

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=93.16  E-value=0.17  Score=43.40  Aligned_cols=136  Identities=14%  Similarity=0.123  Sum_probs=94.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHhhh--------h--hhHHHHHHHHHH
Q 019439           19 TLYLLFLGQLVSFTLALMSFTSSLIADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQ--------R--LRVAWYWYLLLG   88 (341)
Q Consensus        19 ~~~g~~~~~~~al~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~--------~--~~~~~~~~~~~g   88 (341)
                      .+.|.++|...++..+.-...++.....-...-|.++++....+.++++|.....+.        .  ..+-|..+.+.|
T Consensus       183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg  262 (347)
T KOG1442|consen  183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG  262 (347)
T ss_pred             chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence            467999999888887777777664333223346888899999999999988775431        1  122344555666


Q ss_pred             HHHHHHHHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhc
Q 019439           89 FVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLS  154 (341)
Q Consensus        89 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~  154 (341)
                      ++++..++.-..=++.+++-+..+-..-....-.+++..+++|..+...|-+-++.+.|-..-+..
T Consensus       263 lfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~v  328 (347)
T KOG1442|consen  263 LFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLV  328 (347)
T ss_pred             HHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHH
Confidence            666666665555566666655554444556667788999999999999998888888887776653

>PRK02237 hypothetical protein; Provisional

Probab=92.70  E-value=2.9  Score=30.61  Aligned_cols=50  Identities=22%  Similarity=0.583  Sum_probs=38.8

Q ss_pred             cchhHHHH-hhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhc
Q 019439          105 SSITSVTL-LDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLS  154 (341)
Q Consensus       105 ~~~~~~~~-l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~  154 (341)
                      .+.+.+.. --....+...+..+.+-++|+++..++|..++++|+.++...
T Consensus        56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~  106 (109)
T PRK02237         56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA  106 (109)
T ss_pred             hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence            33444433 335556667788899999999999999999999999998764

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=90.40  E-value=1.6  Score=36.50  Aligned_cols=105  Identities=9%  Similarity=0.071  Sum_probs=76.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHhhhh--------hhHH-HHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhhhchHHH
Q 019439           50 APVTQSAFAYFSLALVYGGVLLYRRQR--------LRVA-WYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAW  120 (341)
Q Consensus        50 ~p~~~~~~r~~~~~l~l~~~~~~~~~~--------~~~~-~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~  120 (341)
                      .-....++.-+++..+++.+...-...        .+.+ .....+.|++.....++--.+++.++.+..+++..+.-.-
T Consensus       184 ~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp  263 (309)
T COG5070         184 KDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLP  263 (309)
T ss_pred             chhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhCh
Confidence            345566677777777766655432211        1122 3455667777777788888999999999999999988888


Q ss_pred             HHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhc
Q 019439          121 AIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLS  154 (341)
Q Consensus       121 ~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~  154 (341)
                      .++-+.++++|+.++..+.++.++++...+-...
T Consensus       264 ~alaGlvffdap~nf~si~sillGflsg~iYava  297 (309)
T COG5070         264 IALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVA  297 (309)
T ss_pred             HHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHH
Confidence            8889999999999998888888887766665543

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=90.27  E-value=4.2  Score=35.35  Aligned_cols=65  Identities=18%  Similarity=0.244  Sum_probs=54.7

Q ss_pred             HHHHHHHHHHHHHhhhhhhHHHhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeecc
Q 019439          241 SSFMFYTLAPFVLKLSGATMFNLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTT  305 (341)
Q Consensus       241 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~  305 (341)
                      +-.....+.+.++..++++...+..-...+++.+++.-+++.+++..+|+|+..+.+|++..-..
T Consensus        95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~  159 (372)
T KOG3912|consen   95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL  159 (372)
T ss_pred             HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence            33333466677888899988888877778999999999999999999999999999999887655

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=89.72  E-value=3.1  Score=30.36  Aligned_cols=54  Identities=26%  Similarity=0.556  Sum_probs=41.8

Q ss_pred             hhccchhHHH-HhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcC
Q 019439          102 YQFSSITSVT-LLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (341)
Q Consensus       102 l~~~~~~~~~-~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~  155 (341)
                      ++-.+.+.+. .--....+...+..+.+-++|+++..++|..++++|+.++...+
T Consensus        51 l~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P  105 (107)
T PF02694_consen   51 LQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP  105 (107)
T ss_pred             cCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence            4444445443 33455677788888999999999999999999999999988653

; GO: 0016020 membrane

>PRK02237 hypothetical protein; Provisional

Probab=89.38  E-value=1.6  Score=31.89  Aligned_cols=46  Identities=7%  Similarity=0.015  Sum_probs=37.6

Q ss_pred             HhhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeecccc
Q 019439          262 NLSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEK  307 (341)
Q Consensus       262 ~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  307 (341)
                      +...-+-.+.+.++++.+-|++|+..+++|..+.++|+.+....++
T Consensus        63 AAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR  108 (109)
T PRK02237         63 AAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR  108 (109)
T ss_pred             HHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence            3334445588899999999999999999999999999987766554

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=89.31  E-value=11  Score=32.54  Aligned_cols=119  Identities=16%  Similarity=0.092  Sum_probs=70.4

Q ss_pred             HHHHHHHHHH--HhcCCCchHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhccchhHHH
Q 019439           34 ALMSFTSSLI--ADLGVDAPVTQSAFAYFSLALVYGGVLLYRRQRLRVAWYWYLLLGFVDVQGNFLVNKAYQFSSITSVT  111 (341)
Q Consensus        34 ~~~~~~~~~l--~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~  111 (341)
                      ++..+++.+.  .+.+..+++.+-++......+.-+.....+..  ..-+..-.+.|.+...+|.+..-.++..+.+...
T Consensus         8 a~~~fGs~~vPvK~~~~gDg~~fQw~~~~~i~~~g~~v~~~~~~--p~f~p~amlgG~lW~~gN~~~vpii~~iGLglg~   85 (254)
T PF07857_consen    8 AVLFFGSNFVPVKKFDTGDGFFFQWVMCSGIFLVGLVVNLILGF--PPFYPWAMLGGALWATGNILVVPIIKTIGLGLGM   85 (254)
T ss_pred             HHHHhcccceeeEeccCCCcHHHHHHHHHHHHHHHHHHHHhcCC--CcceeHHHhhhhhhhcCceeehhHhhhhhhHHHH
Confidence            3334444444  22344566655555544333333332222222  2223345666788888899999999999999999


Q ss_pred             HhhhchHHH-HHHHHHH-Hhhcc-----cchhhHHHHHHHHHhhHHHhhc
Q 019439          112 LLDCCTIAW-AIVLTWL-FLGTR-----YSLWQLLGAALCVLGLGLVLLS  154 (341)
Q Consensus       112 ~l~~~~pi~-~~ll~~l-~l~e~-----~~~~~~ig~~l~~~Gv~l~~~~  154 (341)
                      .+.+..-+. .-..+.+ +++++     -+...++|++++++|..+....
T Consensus        86 liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fi  135 (254)
T PF07857_consen   86 LIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFI  135 (254)
T ss_pred             HHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeee
Confidence            887664333 3343433 23322     3577889999999998887653

The region concerned is approximately 280 residues long.

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=88.90  E-value=0.69  Score=33.51  Aligned_cols=70  Identities=20%  Similarity=0.229  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhccchhHHHHh-hhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHh
Q 019439           83 WYLLLGFVDVQGNFLVNKAYQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVL  152 (341)
Q Consensus        83 ~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~  152 (341)
                      .+.+.=.+...++.+||.-+++.|.+.+..+ +++.-.|+++.+..+-.|-...+.++|..+..+|+.+..
T Consensus        54 ~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   54 EYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI  124 (125)
T ss_pred             HHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence            3455555777778899999999999999866 567778899999874444456777789999999887653

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=88.81  E-value=1.2  Score=32.42  Aligned_cols=45  Identities=9%  Similarity=0.020  Sum_probs=37.8

Q ss_pred             hhhhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeecccc
Q 019439          263 LSLLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTEK  307 (341)
Q Consensus       263 ~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~  307 (341)
                      ...-+-.+.+.++++.+-|++|+..+++|..+.++|+.+..+.+|
T Consensus        62 AYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR  106 (107)
T PF02694_consen   62 AYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR  106 (107)
T ss_pred             HhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence            333345588999999999999999999999999999988877654

; GO: 0016020 membrane

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=88.00  E-value=18  Score=32.05  Aligned_cols=57  Identities=21%  Similarity=0.308  Sum_probs=45.3

Q ss_pred             HHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHH
Q 019439           95 NFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLV  151 (341)
Q Consensus        95 ~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~  151 (341)
                      -+.-+.=+..++.-..++..-..-+.+.+++..+++++++...|.|..++..|+..=
T Consensus       257 ~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  257 EFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence            334455555566666666666677889999999999999999999999999998876

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=80.85  E-value=18  Score=31.50  Aligned_cols=76  Identities=17%  Similarity=0.255  Sum_probs=57.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccchhHHHHhhhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcC
Q 019439           80 AWYWYLLLGFVDVQGNFLVNKAYQFSSITSVTLLDCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (341)
Q Consensus        80 ~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~  155 (341)
                      .+...++.+..+..+......-++.-++..++.+....-..|.+++.+++.++++....-+..+.+.|+.+=..++
T Consensus       259 tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  259 TYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             HHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            3444555566666664444444555666777777777888999999999999999999999999999999988875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	341
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	99.03
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.62
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.57
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.54

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=99.03  E-value=2e-10  Score=88.00  Aligned_cols=66  Identities=11%  Similarity=0.096  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHHHHhhhhhhHHHhh-hhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeeccc
Q 019439          241 SSFMFYTLAPFVLKLSGATMFNLS-LLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTE  306 (341)
Q Consensus       241 ~~~~~~~~~~~~~~~~~a~~~~~~-~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  306 (341)
                      ++..+|.++.+++++.+...+... ..+.|+++.+++++++||++++.+++|+++|++|+++.+..+
T Consensus        39 ~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            555558999999999999877776 789999999999999999999999999999999999987654

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.62  E-value=6.2e-07  Score=66.13  Aligned_cols=69  Identities=17%  Similarity=0.277  Sum_probs=61.0

Q ss_pred             HHHHHHHH-HHHHHHhhhccchhHHHHh-hhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcC
Q 019439           87 LGFVDVQG-NFLVNKAYQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (341)
Q Consensus        87 ~g~~~~~~-~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~  155 (341)
                      .+.+.... .+++..++++.|.+.+..+ ..+.|+++++++++++||++++.+++|+.++++|+.++...+
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            44444444 7788999999999999988 799999999999999999999999999999999999987643

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.57  E-value=5.9e-07  Score=66.28  Aligned_cols=66  Identities=11%  Similarity=0.096  Sum_probs=57.6

Q ss_pred             HHHHHHHHHHHHHhhhhhhHHHhh-hhhhHHHHHHHHHHHhccccchhhhhHHhhheeeeeeeeccc
Q 019439          241 SSFMFYTLAPFVLKLSGATMFNLS-LLTADMWAVVFRICFYHQKVDWLYFLAFGIVVIGLIIYSTTE  306 (341)
Q Consensus       241 ~~~~~~~~~~~~~~~~~a~~~~~~-~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~  306 (341)
                      +...++.++..++++.+...+... ..+.|+++.+++++++||+++..+++|..+|++|+++.+..+
T Consensus        39 ~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            444557888899999998887666 788999999999999999999999999999999999986543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.54  E-value=2.3e-07  Score=70.94  Aligned_cols=70  Identities=17%  Similarity=0.282  Sum_probs=50.8

Q ss_pred             HHHHHHHHH-HHHHHHhhhccchhHHHHh-hhchHHHHHHHHHHHhhcccchhhHHHHHHHHHhhHHHhhcC
Q 019439           86 LLGFVDVQG-NFLVNKAYQFSSITSVTLL-DCCTIAWAIVLTWLFLGTRYSLWQLLGAALCVLGLGLVLLSD  155 (341)
Q Consensus        86 ~~g~~~~~~-~~~~~~al~~~~~~~~~~l-~~~~pi~~~ll~~l~l~e~~~~~~~ig~~l~~~Gv~l~~~~~  155 (341)
                      +.+++.... .++++.++++.|++.+..+ .++.|++++++++++++|++++.+++|+.++++|++++...+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            344554544 7799999999999999988 899999999999999999999999999999999999998654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00