Citrus Sinensis ID: 019447


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-
MPPNYVLEDLALLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKTGQNPPPSPPPGPTRCSLLTYCAAGETCCCGSSILGICLSWKCCGFSSAVCCSDHRYCCPSNYPICDSVRHQCLTRLTGNVTAAEAIEMRGSSWKFGSWSSFIDAWFV
cccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccHHHcccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccEEEccEEEcccccHHHHHHHHHccccEEEEEccccccccccccEEcccccccccEEEEEEEEcccccccEEEEEcccccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccEEEccccccccEEcccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccc
ccccccccccccccccccHHHcccEEEEccccccccccccHHHHHHHHHHHHHHHHHHcccccEcHHHHHHHcccccHccEcccHHHHHHHHHHHHcEcEccccccccccccccHHHcccccEcccEEEEcccccHHHHHHHHccccEEEEEccccHHHHcccccEEcccccccccEEEEEEEEEEEccEEEEEEEccEcccccEccEEEEEccccccccHHHcccccEEEEccccccccccccccccccccccccccccEEEEEEEccEEEEEccccccccEEcccccccccccccEEEcccccccccccccccccHHccccccccccccHHHHHHHHcc
mppnyvleDLALLSFTGHKLQMILLIQFRNKSSCLYLLGACwafsatgaiEGINKIVTGslvslseqelidcdrsynsgcggglmDYAYQFVIKNhgidtekdypyrgqagqcnkqklNRHIVtidgykdvpennEKQLLQAVVAQpvsvgicgseRAFQLyssgiftgpcstsldHAVLIVgydsengvdYWIIKnswgrswgmngyMHMQRntgnslgicginmlasyptktgqnpppspppgptrcslltycaagetcccgssilgiclswkccgfssavccsdhryccpsnypicdsvrhqCLTRLTGNVTAAEAIEMrgsswkfgswssfiDAWFV
MPPNYVLEDLALLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKTGQNPPPSPPPGPTRCSLLTYCAAGETCCCGSSILGICLSWKCCGFSSAVCCSDHRYCCPSNYPICDSVRHQCLTRLTGNVTAAEAIEmrgsswkfgswssfidawfv
MPPNYVLEDLALLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKTGQNpppspppgpTRCSLLTYCAAGETCCCGSSILGICLSWKCCGFSSAVCCSDHRYCCPSNYPICDSVRHQCLTRLTGNVTAAEAIEMRgsswkfgswssfIDAWFV
****YVLEDLALLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASY******************CSLLTYCAAGETCCCGSSILGICLSWKCCGFSSAVCCSDHRYCCPSNYPICDSVRHQCLTRLTGNVTAAEAIEMRGSSWKFGSWSSFIDAWF*
**PNY**EDLALLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASY********************LLTYCAAGETCCCGSSILGICLSWKCCGFSSAVCCSDHRYCCPSNYPICDSVRHQCLTRL*******************GSWSSFIDAWFV
MPPNYVLEDLALLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK************PTRCSLLTYCAAGETCCCGSSILGICLSWKCCGFSSAVCCSDHRYCCPSNYPICDSVRHQCLTRLTGNVTAAEAIEMRGSSWKFGSWSSFIDAWFV
****YVLEDLALLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKTGQNPP*SP**GPTRCSLLTYCAAGETCCCGSSILGICLSWKCCGFSSAVCCSDHRYCCPSNYPICDSVRHQCLTRLTGNVTAAEAIEMRGSSWKFGSWSSFIDAWFV
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MPPNYVLEDLALLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKTGQNPPPSPPPGPTRCSLLTYCAAGETCCCGSSILGICLSWKCCGFSSAVCCSDHRYCCPSNYPICDSVRHQCLTRLTGNVTAAEAIEMRGSSWKFGSWSSFIDAWFV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query341 2.2.26 [Sep-21-2011]
P20721346 Low-temperature-induced c N/A no 0.859 0.846 0.519 1e-83
P43297462 Cysteine proteinase RD21a no no 0.788 0.582 0.541 6e-83
P25776458 Oryzain alpha chain OS=Or no no 0.788 0.587 0.552 2e-82
P25777466 Oryzain beta chain OS=Ory no no 0.803 0.587 0.501 5e-79
Q7XR52490 Cysteine protease 1 OS=Or no no 0.818 0.569 0.503 5e-78
P25251328 Cysteine proteinase COT44 N/A no 0.586 0.609 0.635 3e-73
Q94B08376 Germination-specific cyst no no 0.586 0.531 0.631 3e-71
Q9LM66356 Xylem cysteine proteinase no no 0.604 0.578 0.557 5e-67
Q9LT77362 Probable cysteine protein no no 0.604 0.569 0.558 2e-66
P43156360 Thiol protease SEN102 OS= N/A no 0.592 0.561 0.588 2e-65
>sp|P20721|CYSPL_SOLLC Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1 Back     alignment and function desciption
 Score =  310 bits (794), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 158/304 (51%), Positives = 202/304 (66%), Gaps = 11/304 (3%)

Query: 24  LLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGG 83
           +L+  +++ SC    G+CWAFSA  A+E IN IVTG+L+SLSEQEL+DCDRSYN GC GG
Sbjct: 29  VLVGVKDQGSC----GSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDRSYNEGCDGG 84

Query: 84  LMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAV 143
           LMDYA++FVIKN GIDTE+DYPY+ + G C++ + N  +V ID Y+DVP NNEK L +AV
Sbjct: 85  LMDYAFEFVIKNGGIDTEEDYPYKERNGVCDQYRKNAKVVKIDSYEDVPVNNEKALQKAV 144

Query: 144 VAQPVSVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSW 203
             QPVS+ +    R FQ Y SGIFTG C T++DH V+I GY +ENG+DYWI++NSWG + 
Sbjct: 145 AHQPVSIALEAGGRDFQHYKSGIFTGKCGTAVDHGVVIAGYGTENGMDYWIVRNSWGANC 204

Query: 204 GMNGYMHMQRNTGNSLGICGINMLASYPTKTG------QNPPPSPPPGPTRCSLLTYCAA 257
             NGY+ +QRN  +S G+CG+ +  SYP KTG         PPSP   PT C   + CA 
Sbjct: 205 RENGYLRVQRNVSSSSGLCGLAIEPSYPVKTGPNPPKPAPSPPSPVKPPTECDEYSQCAV 264

Query: 258 GETCCCGSSILGICLSWKCCGFSSAVCCSDHRYCCPSNYPICDSVRHQCLTRLTGNVTAA 317
           G TCCC       C SW CC    A CC DH  CCP +YPIC+ VR    +   GN    
Sbjct: 265 GTTCCCILQFRRSCFSWGCCPLEGATCCEDHYSCCPHDYPICN-VRQGTCSMSKGNPLGV 323

Query: 318 EAIE 321
           +A++
Sbjct: 324 KAMK 327





Solanum lycopersicum (taxid: 4081)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: -
>sp|P43297|RD21A_ARATH Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1 Back     alignment and function description
>sp|P25776|ORYA_ORYSJ Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2 Back     alignment and function description
>sp|P25777|ORYB_ORYSJ Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2 Back     alignment and function description
>sp|Q7XR52|CYSP1_ORYSJ Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2 Back     alignment and function description
>sp|P25251|CYSP4_BRANA Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1 Back     alignment and function description
>sp|Q94B08|GCP1_ARATH Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2 Back     alignment and function description
>sp|Q9LM66|XCP2_ARATH Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2 Back     alignment and function description
>sp|Q9LT77|CPR1_ARATH Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1 Back     alignment and function description
>sp|P43156|CYSP_HEMSP Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query341
224085750436 predicted protein [Populus trichocarpa] 0.912 0.713 0.728 1e-129
317106666441 JHL18I08.3 [Jatropha curcas] 0.914 0.707 0.706 1e-126
18391078437 xylem bark cysteine peptidase 3 [Arabido 0.900 0.702 0.666 1e-118
297843784439 hypothetical protein ARALYDRAFT_471096 [ 0.900 0.699 0.678 1e-118
255538788422 cysteine protease, putative [Ricinus com 0.812 0.656 0.736 1e-118
14600257437 papain-like cysteine peptidase XBCP3 [Ar 0.900 0.702 0.663 1e-118
226505708 460 uncharacterized protein LOC100273952 pre 0.903 0.669 0.690 1e-117
225458143436 PREDICTED: cysteine proteinase RD21a [Vi 0.879 0.688 0.691 1e-117
356509992439 PREDICTED: oryzain alpha chain-like [Gly 0.958 0.744 0.660 1e-115
449469929431 PREDICTED: cysteine proteinase RD21a-lik 0.850 0.672 0.722 1e-113
>gi|224085750|ref|XP_002307688.1| predicted protein [Populus trichocarpa] gi|222857137|gb|EEE94684.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 231/317 (72%), Positives = 261/317 (82%), Gaps = 6/317 (1%)

Query: 24  LLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGG 83
           ++   +++ SC    GACW+FSATGAIEGINKIVTGSLVSLSEQELI+CD+SYN GCGGG
Sbjct: 125 VVTNVKDQGSC----GACWSFSATGAIEGINKIVTGSLVSLSEQELIECDKSYNDGCGGG 180

Query: 84  LMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAV 143
           LMDYA+QFVI NHGIDTE+DYPYR + G CNK ++ R +VTID Y DVPENNEKQLLQAV
Sbjct: 181 LMDYAFQFVINNHGIDTEEDYPYRARDGTCNKDRMKRRVVTIDKYVDVPENNEKQLLQAV 240

Query: 144 VAQPVSVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSW 203
            AQPVSVGICGSERAFQ+YS GIFTGPCSTSLDHAVLIVGY SENGVDYWI+KNSWG  W
Sbjct: 241 AAQPVSVGICGSERAFQMYSKGIFTGPCSTSLDHAVLIVGYGSENGVDYWIVKNSWGTGW 300

Query: 204 GMNGYMHMQRNTGNSLGICGINMLASYPTKTGQNPPPSPPPGPTRCSLLTYCAAGETCCC 263
           GM GYMHMQRN+GNS G+CGINMLASYP KT  NPPP PPPGPT+C+LLTYCAAGETCCC
Sbjct: 301 GMRGYMHMQRNSGNSQGVCGINMLASYPVKTSPNPPPPPPPGPTKCNLLTYCAAGETCCC 360

Query: 264 GSSILGICLSWKCCGFSSAVCCSDHRYCCPSNYPICDSVRHQCLTRLTGNVTAAEAIEMR 323
                GIC+SWKCCG  SAVCC D  +CCP +YP+CD+ ++ C  R  GN T  EAIE +
Sbjct: 361 ARKFFGICISWKCCGLDSAVCCKDRLHCCPHDYPVCDTDKNMCFKR-AGNATRMEAIEGK 419

Query: 324 GSSWKFGSWSSFIDAWF 340
            +S KFGSW S  +AW 
Sbjct: 420 -TSGKFGSWISLPEAWI 435




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|317106666|dbj|BAJ53169.1| JHL18I08.3 [Jatropha curcas] Back     alignment and taxonomy information
>gi|18391078|ref|NP_563855.1| xylem bark cysteine peptidase 3 [Arabidopsis thaliana] gi|110741821|dbj|BAE98853.1| papain-like cysteine peptidase XBCP3 [Arabidopsis thaliana] gi|111074448|gb|ABH04597.1| At1g09850 [Arabidopsis thaliana] gi|332190386|gb|AEE28507.1| xylem bark cysteine peptidase 3 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297843784|ref|XP_002889773.1| hypothetical protein ARALYDRAFT_471096 [Arabidopsis lyrata subsp. lyrata] gi|297335615|gb|EFH66032.1| hypothetical protein ARALYDRAFT_471096 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|255538788|ref|XP_002510459.1| cysteine protease, putative [Ricinus communis] gi|223551160|gb|EEF52646.1| cysteine protease, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|14600257|gb|AAK71314.1|AF388175_1 papain-like cysteine peptidase XBCP3 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|226505708|ref|NP_001141813.1| uncharacterized protein LOC100273952 precursor [Zea mays] gi|194706024|gb|ACF87096.1| unknown [Zea mays] gi|413945958|gb|AFW78607.1| hypothetical protein ZEAMMB73_489507 [Zea mays] Back     alignment and taxonomy information
>gi|225458143|ref|XP_002280937.1| PREDICTED: cysteine proteinase RD21a [Vitis vinifera] gi|302142569|emb|CBI19772.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356509992|ref|XP_003523725.1| PREDICTED: oryzain alpha chain-like [Glycine max] Back     alignment and taxonomy information
>gi|449469929|ref|XP_004152671.1| PREDICTED: cysteine proteinase RD21a-like [Cucumis sativus] gi|449529596|ref|XP_004171784.1| PREDICTED: cysteine proteinase RD21a-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query341
TAIR|locus:2024362437 XBCP3 "xylem bark cysteine pep 0.829 0.647 0.687 2.8e-114
TAIR|locus:2090614452 AT3G19390 [Arabidopsis thalian 0.818 0.617 0.547 9.9e-87
TAIR|locus:2167821463 RD21B "esponsive to dehydratio 0.806 0.593 0.533 5e-83
TAIR|locus:2825832462 RD21A "responsive to dehydrati 0.788 0.582 0.527 9.4e-82
TAIR|locus:2090629362 AT3G19400 [Arabidopsis thalian 0.604 0.569 0.558 6.7e-65
TAIR|locus:2030427356 XCP2 "xylem cysteine peptidase 0.598 0.573 0.562 3.7e-64
TAIR|locus:2117979356 AT4G23520 [Arabidopsis thalian 0.592 0.567 0.555 6.2e-62
TAIR|locus:2122113355 XCP1 "xylem cysteine peptidase 0.574 0.552 0.581 6.2e-62
TAIR|locus:2128243364 AT4G11310 [Arabidopsis thalian 0.565 0.530 0.548 1.4e-57
TAIR|locus:2152445346 SAG12 "senescence-associated g 0.583 0.575 0.531 1.2e-56
TAIR|locus:2024362 XBCP3 "xylem bark cysteine peptidase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1127 (401.8 bits), Expect = 2.8e-114, P = 2.8e-114
 Identities = 198/288 (68%), Positives = 234/288 (81%)

Query:    29 RNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYA 88
             +++ SC    GACW+FSATGA+EGIN+IVTG L+SLSEQELIDCD+SYN+GC GGLMDYA
Sbjct:   134 KDQGSC----GACWSFSATGAMEGINQIVTGDLISLSEQELIDCDKSYNAGCNGGLMDYA 189

Query:    89 YQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPV 148
             ++FVIKNHGIDTEKDYPY+ + G C K KL + +VTID Y  V  N+EK L++AV AQPV
Sbjct:   190 FEFVIKNHGIDTEKDYPYQERDGTCKKDKLKQKVVTIDSYAGVKSNDEKALMEAVAAQPV 249

Query:   149 SVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGY 208
             SVGICGSERAFQLYSSGIF+GPCSTSLDHAVLIVGY S+NGVDYWI+KNSWG+SWGM+G+
Sbjct:   250 SVGICGSERAFQLYSSGIFSGPCSTSLDHAVLIVGYGSQNGVDYWIVKNSWGKSWGMDGF 309

Query:   209 MHMQRNTGNSLGICGINMLASYPTKTGQNXXXXXXXXXTRCSLLTYCAAGETCCCGSSIL 268
             MHMQRNT NS G+CGINMLASYP KT  N         T+C+L TYC++GETCCC   + 
Sbjct:   310 MHMQRNTENSDGVCGINMLASYPIKTHPNPPPPSPPGPTKCNLFTYCSSGETCCCARELF 369

Query:   269 GICLSWKCCGFSSAVCCSDHRYCCPSNYPICDSVRHQCLTRLTGNVTA 316
             G+C SWKCC   SAVCC D R+CCP +YP+CD+ R  CL + TGN TA
Sbjct:   370 GLCFSWKCCEIESAVCCKDGRHCCPHDYPVCDTTRSLCLKK-TGNFTA 416




GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA
GO:0008234 "cysteine-type peptidase activity" evidence=IEA;ISS
GO:0005773 "vacuole" evidence=IDA
GO:0005783 "endoplasmic reticulum" evidence=IDA
TAIR|locus:2090614 AT3G19390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2167821 RD21B "esponsive to dehydration 21B" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2825832 RD21A "responsive to dehydration 21A" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090629 AT3G19400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2030427 XCP2 "xylem cysteine peptidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2117979 AT4G23520 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2122113 XCP1 "xylem cysteine peptidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128243 AT4G11310 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152445 SAG12 "senescence-associated gene 12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P20721CYSPL_SOLLC3, ., 4, ., 2, 2, ., -0.51970.85920.8468N/Ano

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.220.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query341
pfam00112213 pfam00112, Peptidase_C1, Papain family cysteine pr 1e-102
cd02248210 cd02248, Peptidase_C1A, Peptidase C1A subfamily (M 7e-87
smart00645175 smart00645, Pept_C1, Papain family cysteine protea 7e-66
PTZ00200448 PTZ00200, PTZ00200, cysteine proteinase; Provision 8e-57
PTZ00021489 PTZ00021, PTZ00021, falcipain-2; Provisional 4e-43
PTZ00203348 PTZ00203, PTZ00203, cathepsin L protease; Provisio 3e-38
cd02619223 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS 5e-31
cd02620236 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B gro 4e-27
cd02698239 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; th 1e-20
cd02621243 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; al 2e-20
COG4870372 COG4870, COG4870, Cysteine protease [Posttranslati 1e-11
smart0027751 smart00277, GRAN, Granulin 3e-10
pfam0039643 pfam00396, Granulin, Granulin 3e-09
PTZ00364548 PTZ00364, PTZ00364, dipeptidyl-peptidase I precurs 2e-07
PTZ00462 1004 PTZ00462, PTZ00462, Serine-repeat antigen protein; 1e-05
PTZ00049693 PTZ00049, PTZ00049, cathepsin C-like protein; Prov 2e-05
>gnl|CDD|215726 pfam00112, Peptidase_C1, Papain family cysteine protease Back     alignment and domain information
 Score =  299 bits (768), Expect = e-102
 Identities = 107/206 (51%), Positives = 128/206 (62%), Gaps = 11/206 (5%)

Query: 29  RNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYA 88
           +++  C    G+CWAFSA GA+EG   I TG LVSLSEQ+L+DCD   N+GC GGL D A
Sbjct: 17  KDQGQC----GSCWAFSAVGALEGRYCIKTGKLVSLSEQQLVDCDTG-NNGCNGGLPDNA 71

Query: 89  YQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVA-QP 147
           ++++ KN GI TE DYPY    G C  +K N     I GY DVP N+E+ L  A+    P
Sbjct: 72  FEYIKKNGGIVTESDYPYTAHDGTCKFKKSNSKYAKIKGYGDVPYNDEEALQAALAKNGP 131

Query: 148 VSVGICGSERAFQLYSSGIFTGP-CSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMN 206
           VSV I   E  FQLY SG++    CS  LDHAVLIVGY +ENGV YWI+KNSWG  WG N
Sbjct: 132 VSVAIDAYEDDFQLYKSGVYKHTECSGELDHAVLIVGYGTENGVPYWIVKNSWGTDWGEN 191

Query: 207 GYMHMQRNTGNSLGICGINMLASYPT 232
           GY  + R        CGI   ASYP 
Sbjct: 192 GYFRIARGVNE----CGIASEASYPI 213


Length = 213

>gnl|CDD|239068 cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>gnl|CDD|214761 smart00645, Pept_C1, Papain family cysteine protease Back     alignment and domain information
>gnl|CDD|240310 PTZ00200, PTZ00200, cysteine proteinase; Provisional Back     alignment and domain information
>gnl|CDD|240232 PTZ00021, PTZ00021, falcipain-2; Provisional Back     alignment and domain information
>gnl|CDD|185513 PTZ00203, PTZ00203, cathepsin L protease; Provisional Back     alignment and domain information
>gnl|CDD|239110 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>gnl|CDD|239111 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>gnl|CDD|239149 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>gnl|CDD|239112 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>gnl|CDD|227207 COG4870, COG4870, Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|197621 smart00277, GRAN, Granulin Back     alignment and domain information
>gnl|CDD|215898 pfam00396, Granulin, Granulin Back     alignment and domain information
>gnl|CDD|240381 PTZ00364, PTZ00364, dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>gnl|CDD|185641 PTZ00462, PTZ00462, Serine-repeat antigen protein; Provisional Back     alignment and domain information
>gnl|CDD|240244 PTZ00049, PTZ00049, cathepsin C-like protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 341
KOG1542372 consensus Cysteine proteinase Cathepsin F [Posttra 100.0
PTZ00203348 cathepsin L protease; Provisional 100.0
KOG1543325 consensus Cysteine proteinase Cathepsin L [Posttra 100.0
PTZ00021489 falcipain-2; Provisional 100.0
cd02621243 Peptidase_C1A_CathepsinC Cathepsin C; also known a 100.0
PTZ00200448 cysteine proteinase; Provisional 100.0
cd02698239 Peptidase_C1A_CathepsinX Cathepsin X; the only pap 100.0
cd02248210 Peptidase_C1A Peptidase C1A subfamily (MEROPS data 100.0
cd02620236 Peptidase_C1A_CathepsinB Cathepsin B group; compos 100.0
PF00112219 Peptidase_C1: Papain family cysteine protease This 100.0
PTZ00364548 dipeptidyl-peptidase I precursor; Provisional 100.0
PTZ00049693 cathepsin C-like protein; Provisional 100.0
smart00645174 Pept_C1 Papain family cysteine protease. 100.0
cd02619223 Peptidase_C1 C1 Peptidase family (MEROPS database 100.0
PTZ00462 1004 Serine-repeat antigen protein; Provisional 100.0
KOG1544470 consensus Predicted cysteine proteinase TIN-ag [Ge 100.0
KOG429690 consensus Epithelin/granulin [Signal transduction 99.96
COG4870372 Cysteine protease [Posttranslational modification, 99.96
smart0027751 GRAN Granulin. 99.89
cd00585437 Peptidase_C1B Peptidase C1B subfamily (MEROPS data 99.87
PF0039643 Granulin: Granulin; InterPro: IPR000118 Metazoan g 99.76
PF03051438 Peptidase_C1_2: Peptidase C1-like family This fami 99.6
COG3579444 PepC Aminopeptidase C [Amino acid transport and me 98.4
PF13529144 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3 97.55
KOG4128457 consensus Bleomycin hydrolases and aminopeptidases 96.3
PF05543175 Peptidase_C47: Staphopain peptidase C47; InterPro: 96.17
PF14399317 Transpep_BrtH: NlpC/p60-like transpeptidase 91.21
COG4990195 Uncharacterized protein conserved in bacteria [Fun 90.64
>KOG1542 consensus Cysteine proteinase Cathepsin F [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
Probab=100.00  E-value=3.8e-62  Score=457.16  Aligned_cols=214  Identities=44%  Similarity=0.824  Sum_probs=194.9

Q ss_pred             CccccCCCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCCCCCCCCCCcHH
Q 019447            7 LEDLALLSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMD   86 (341)
Q Consensus         7 ~~~~~~lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~~~~gC~GG~~~   86 (341)
                      .+....||.++|||++|.||||||||.|    |||||||+|+++|+++.|++|++++||||||+||+. .+.||+||++.
T Consensus       151 ~~~~~~lP~~fDWR~kgaVTpVKnQG~C----GSCWAFS~tG~vEga~~i~~g~LvsLSEQeLvDCD~-~d~gC~GGl~~  225 (372)
T KOG1542|consen  151 IEPGESLPESFDWRDKGAVTPVKNQGMC----GSCWAFSTTGAVEGAWAIATGKLVSLSEQELVDCDS-CDNGCNGGLMD  225 (372)
T ss_pred             CCCCCCCCcccchhccCCccccccCCcC----cchhhhhhhhhhhhHHHhhcCcccccchhhhhcccC-cCCcCCCCChh
Confidence            4566899999999999999999999999    999999999999999999999999999999999996 68999999999


Q ss_pred             HHHHHHHHhCCcccCCcccCCCCCC-cccccccCCceeeeceeEecCCChHHHHHHHHH-hCCcEEEEecccccccccCC
Q 019447           87 YAYQFVIKNHGIDTEKDYPYRGQAG-QCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVV-AQPVSVGICGSERAFQLYSS  164 (341)
Q Consensus        87 ~a~~~l~~~~Gi~~E~~yPY~~~~~-~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~-~GPV~v~i~~~~~~f~~y~~  164 (341)
                      +||+|+++.+|+..|++|||++..+ .|..++ ....+.|.+|..++. ||++|.+.|. +|||+|+|++  ..+|+|++
T Consensus       226 nA~~~~~~~gGL~~E~dYPY~g~~~~~C~~~~-~~~~v~I~~f~~l~~-nE~~ia~wLv~~GPi~vgiNa--~~mQ~Yrg  301 (372)
T KOG1542|consen  226 NAFKYIKKAGGLEKEKDYPYTGKKGNQCHFDK-SKIVVSIKDFSMLSN-NEDQIAAWLVTFGPLSVGINA--KPMQFYRG  301 (372)
T ss_pred             HHHHHHHHhCCccccccCCccccCCCccccch-hhceEEEeccEecCC-CHHHHHHHHHhcCCeEEEEch--HHHHHhcc
Confidence            9999988888999999999999887 898765 567789999999987 5777777666 5999999997  57999999


Q ss_pred             ceEeC---CCCCC-CCceEEEEEeeecC-CeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeeccccccc
Q 019447          165 GIFTG---PCSTS-LDHAVLIVGYDSEN-GVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK  233 (341)
Q Consensus       165 GIy~~---~~~~~-~~HaV~IVGyg~~~-g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~  233 (341)
                      ||+.+   .|... ++|+|+|||||..+ .++|||||||||++|||+||+|+.|+.+    .|||+.+++-++.
T Consensus       302 GV~~P~~~~Cs~~~~~HaVLlvGyG~~g~~~PYWIVKNSWG~~WGE~GY~~l~RG~N----~CGi~~mvss~~v  371 (372)
T KOG1542|consen  302 GVSCPSKYICSPKLLNHAVLLVGYGSSGYEKPYWIVKNSWGTSWGEKGYYKLCRGSN----ACGIADMVSSAAV  371 (372)
T ss_pred             cccCCCcccCCccccCceEEEEeecCCCCCCceEEEECCccccccccceEEEecccc----ccccccchhhhhc
Confidence            99977   56655 79999999999998 8999999999999999999999999965    9999999886643



>PTZ00203 cathepsin L protease; Provisional Back     alignment and domain information
>KOG1543 consensus Cysteine proteinase Cathepsin L [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00021 falcipain-2; Provisional Back     alignment and domain information
>cd02621 Peptidase_C1A_CathepsinC Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>PTZ00200 cysteine proteinase; Provisional Back     alignment and domain information
>cd02698 Peptidase_C1A_CathepsinX Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>cd02248 Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>cd02620 Peptidase_C1A_CathepsinB Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>PF00112 Peptidase_C1: Papain family cysteine protease This is family C1 in the peptidase classification Back     alignment and domain information
>PTZ00364 dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>PTZ00049 cathepsin C-like protein; Provisional Back     alignment and domain information
>smart00645 Pept_C1 Papain family cysteine protease Back     alignment and domain information
>cd02619 Peptidase_C1 C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>PTZ00462 Serine-repeat antigen protein; Provisional Back     alignment and domain information
>KOG1544 consensus Predicted cysteine proteinase TIN-ag [General function prediction only] Back     alignment and domain information
>KOG4296 consensus Epithelin/granulin [Signal transduction mechanisms] Back     alignment and domain information
>COG4870 Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>smart00277 GRAN Granulin Back     alignment and domain information
>cd00585 Peptidase_C1B Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC) Back     alignment and domain information
>PF00396 Granulin: Granulin; InterPro: IPR000118 Metazoan granulins [] are a family of cysteine-rich peptides of about 6 Kd which may have multiple biological activity Back     alignment and domain information
>PF03051 Peptidase_C1_2: Peptidase C1-like family This family is a subfamily of the Prosite entry; InterPro: IPR004134 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG3579 PepC Aminopeptidase C [Amino acid transport and metabolism] Back     alignment and domain information
>PF13529 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3ERV_A Back     alignment and domain information
>KOG4128 consensus Bleomycin hydrolases and aminopeptidases of cysteine protease family [Amino acid transport and metabolism] Back     alignment and domain information
>PF05543 Peptidase_C47: Staphopain peptidase C47; InterPro: IPR008750 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF14399 Transpep_BrtH: NlpC/p60-like transpeptidase Back     alignment and domain information
>COG4990 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query341
3p5w_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 5e-62
1aec_A218 Crystal Structure Of Actinidin-E-64 Complex+ Length 5e-62
1cqd_A221 The 2.1 Angstrom Structure Of A Cysteine Protease W 1e-61
3p5u_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 3e-61
1s4v_A229 The 2.0 A Crystal Structure Of The Kdel-Tailed Cyst 3e-60
2fo5_A262 Crystal Structure Of Recombinant Barley Cysteine En 6e-60
1iwd_A215 Proposed Amino Acid Sequence And The 1.63 Angstrom 2e-59
2act_A220 Crystallographic Refinement Of The Structure Of Act 6e-59
2pns_A208 1.9 Angstrom Resolution Crystal Structure Of A Plan 3e-53
3bcn_A209 Crystal Structure Of A Papain-Like Cysteine Proteas 4e-53
1o0e_A208 1.9 Angstrom Crystal Structure Of A Plant Cysteine 1e-52
1yal_A218 Carica Papaya Chymopapain At 1.7 Angstroms Resoluti 9e-50
1ppo_A216 Determination Of The Structure Of Papaya Protease O 2e-48
2bdz_A214 Mexicain From Jacaratia Mexicana Length = 214 2e-48
1meg_A216 Crystal Structure Of A Caricain D158e Mutant In Com 5e-48
3u8e_A222 Crystal Structure Of Cysteine Protease From Bulbs O 5e-47
1pci_A322 Procaricain Length = 322 1e-46
3f75_A224 Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In 2e-46
2b1m_A246 Crystal Structure Of A Papain-Fold Protein Without 4e-45
3h7d_A215 The Crystal Structure Of The Cathepsin K Variant M5 1e-44
3ioq_A213 Crystal Structure Of The Carica Candamarcensis Cyst 9e-44
7pck_A314 Crystal Structure Of Wild Type Human Procathepsin K 1e-43
1mem_A215 Crystal Structure Of Cathepsin K Complexed With A P 1e-43
3ovz_A213 Cathepsin K In Complex With A Covalent Inhibitor Wi 1e-43
1snk_A214 Cathepsin K Complexed With Carbamate Derivatized No 1e-43
1u9v_A217 Crystal Structure Of The Cysteine Protease Human Ca 1e-43
2f7d_A215 A Mutant Rabbit Cathepsin K With A Nitrile Inhibito 1e-43
1vsn_A215 Crystal Structure Of A Potent Small Molecule Inhibi 2e-43
1khp_A212 Monoclinic Form Of Papain/zlfg-dam Covalent Complex 6e-43
1pip_A212 Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Al 1e-42
1ppp_A212 Crystal Structure Of Papain-E64-C Complex. Binding 1e-42
1ms6_A222 Dipeptide Nitrile Inhibitor Bound To Cathepsin S. L 3e-42
3n3g_A217 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitri 3e-42
3ovx_A218 Cathepsin S In Complex With A Covalent Inhibitor Wi 3e-42
2f1g_A220 Cathepsin S In Complex With Non-Covalent 2-(Benzoxa 3e-42
2g6d_A217 Human Cathepsin S Mutant With Vinyl Sulfone Inhibit 4e-42
2fq9_A225 Cathepsin S With Nitrile Inhibitor Length = 225 4e-42
2fye_A217 Mutant Human Cathepsin S With Irreversible Inhibito 5e-42
3ima_A212 Complex Strcuture Of Tarocystatin And Papain Length 6e-42
1npz_A217 Crystal Structures Of Cathepsin S Inhibitor Complex 6e-42
2cio_A212 The High Resolution X-Ray Structure Of Papain Compl 6e-42
1stf_E212 The Refined 2.4 Angstroms X-Ray Crystal Structure O 1e-41
2c0y_A315 The Crystal Structure Of A Cys25ala Mutant Of Human 2e-41
3tnx_A363 Structure Of The Precursor Of A Thermostable Varian 2e-41
3kwn_A219 Cathepsin S In Complex With Thioether Acetamide P3 2e-41
3mpe_A220 Crystal Structure Of Human Cathepsin-S C25s Mutant 2e-41
3iej_A222 Pyrazole-Based Cathepsin S Inhibitors With Arylalky 3e-41
3hwn_A258 Cathepsin L With Az13010160 Length = 258 3e-41
3of8_A221 Structural Basis For Reversible And Irreversible In 3e-41
3h89_A220 A Combined Crystallographic And Molecular Dynamics 3e-41
3hha_A220 Crystal Structure Of Cathepsin L In Complex With Az 4e-41
1glo_A217 Crystal Structure Of Cys25ser Mutant Of Human Cathe 4e-41
1cjl_A312 Crystal Structure Of A Cysteine Protease Proform Le 4e-41
3qt4_A329 Structure Of Digestive Procathepsin L 3 Of Tenebrio 1e-40
3iv2_A220 Crystal Structure Of Mature Apo-Cathepsin L C25a Mu 2e-40
2nqd_B221 Crystal Structure Of Cysteine Protease Inhibitor, C 2e-40
1cs8_A316 Crystal Structure Of Procathepsin L Length = 316 3e-40
3bc3_A220 Exploring Inhibitor Binding At The S Subsites Of Ca 3e-40
3kse_A220 Unreduced Cathepsin L In Complex With Stefin A Leng 4e-40
1gec_E216 Glycyl Endopeptidase-complex With Benzyloxycarbonyl 5e-40
1fh0_A221 Crystal Structure Of Human Cathepsin V Complexed Wi 1e-39
3h6s_A221 Strucure Of Clitocypin - Cathepsin V Complex Length 1e-38
2vhs_A217 Cathsilicatein, A Chimera Length = 217 6e-38
8pch_A220 Crystal Structure Of Porcine Cathepsin H Determined 2e-37
2o6x_A310 Crystal Structure Of Procathepsin L1 From Fasciola 4e-37
3qj3_A331 Structure Of Digestive Procathepsin L2 Proteinase F 1e-34
2p7u_A215 The Crystal Structure Of Rhodesain, The Major Cyste 2e-30
1icf_A175 Crystal Structure Of Mhc Class Ii Associated P41 Ii 4e-29
1yvb_A241 The Plasmodium Falciparum Cysteine Protease Falcipa 1e-28
1aim_A215 Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluor 2e-28
1ewp_A215 Cruzain Bound To Mor-Leu-Hpq Length = 215 3e-28
1mhw_A175 Design Of Non-covalent Inhibitors Of Human Cathepsi 4e-28
3pnr_A240 Structure Of Pbicp-C In Complex With Falcipain-2 Le 1e-27
3iut_A221 The Crystal Structure Of Cruzain In Complex With A 1e-27
3hd3_A215 High Resolution Crystal Structure Of Cruzain Bound 1e-27
3bpm_A243 Crystal Structure Of Falcipain-3 With Its Inhibitor 3e-26
1m6d_A214 Crystal Structure Of Human Cathepsin F Length = 214 7e-24
3d6s_A223 Crystal Structure Of Mite Allergen Der F 1 Length = 2e-19
3pdf_A441 Discovery Of Novel Cyanamide-Based Inhibitors Of Ca 2e-16
2as8_A222 Crystal Structure Of Mature And Fully Active Der P 3e-16
3rvw_A222 Crystal Structure Of Der P 1 Complexed With Fab 4c1 3e-16
1jqp_A438 Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric 2e-15
1xkg_A312 Crystal Structure Of The Major House Dust Mite Alle 3e-15
3f5v_A222 C2 Crystal Form Of Mite Allergen Der P 1 Length = 2 3e-15
1deu_A277 Crystal Structure Of Human Procathepsin X: A Cystei 1e-13
1ef7_A242 Crystal Structure Of Human Cathepsin X Length = 242 1e-13
3qsd_A254 Structure Of Cathepsin B1 From Schistosoma Mansoni 2e-13
1pbh_A317 Crystal Structure Of Human Recombinant Procathepsin 2e-11
1k3b_C69 Crystal Structure Of Human Dipeptidyl Peptidase I ( 1e-10
3ai8_B256 Cathepsin B In Complex With The Nitroxoline Length 3e-10
3k9m_A254 Cathepsin B In Complex With Stefin A Length = 254 3e-10
1gmy_A261 Cathepsin B Complexed With Dipeptidyl Nitrile Inhib 3e-10
3cbj_A266 Chagasin-cathepsin B Complex Length = 266 9e-10
1cte_A254 Crystal Structures Of Recombinant Rat Cathepsin B A 9e-10
4hwy_A340 Trypanosoma Brucei Procathepsin B Solved From 40 Fs 1e-09
1cpj_A260 Crystal Structures Of Recombinant Rat Cathepsin B A 1e-09
3mor_A317 Crystal Structure Of Cathepsin B From Trypanosoma B 2e-09
3hhi_A325 Crystal Structure Of Cathepsin B From T. Brucei In 2e-09
1mir_A322 Rat Procathepsin B Length = 322 1e-08
1qdq_A253 X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 3e-08
1sp4_B205 Crystal Structure Of Ns-134 In Complex With Bovine 4e-08
1ito_A256 Crystal Structure Analysis Of Bovine Spleen Catheps 4e-08
1huc_B205 The Refined 2.15 Angstroms X-Ray Crystal Structure 2e-07
1icf_B42 Crystal Structure Of Mhc Class Ii Associated P41 Ii 7e-07
2jye_A72 Human Granulin A Length = 72 4e-04
>pdb|3P5W|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure

Iteration: 1

Score = 234 bits (597), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 115/210 (54%), Positives = 144/210 (68%), Gaps = 6/210 (2%) Query: 25 LIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNS-GCGGG 83 ++ +++ C G+CWAFS A+EGINKI TG L+SLSEQEL+DC R+ N+ GC GG Sbjct: 13 VVDIKDQGQC----GSCWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQNTRGCDGG 68 Query: 84 LMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAV 143 M +QF+I N GI+TE +YPY + GQCN V+ID Y++VP NNE L AV Sbjct: 69 FMTDGFQFIINNGGINTEANYPYTAEEGQCNLDLQQEKYVSIDTYENVPYNNEWALQTAV 128 Query: 144 VAQPVSVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSW 203 QPVSV + + FQ YSSGIFTGPC T++DHAV IVGY +E G+DYWI+KNSWG +W Sbjct: 129 AYQPVSVALEAAGYNFQHYSSGIFTGPCGTAVDHAVTIVGYGTEGGIDYWIVKNSWGTTW 188 Query: 204 GMNGYMHMQRNTGNSLGICGINMLASYPTK 233 G GYM +QRN G +G CGI ASYP K Sbjct: 189 GEEGYMRIQRNVG-GVGQCGIAKKASYPVK 217
>pdb|1AEC|A Chain A, Crystal Structure Of Actinidin-E-64 Complex+ Length = 218 Back     alignment and structure
>pdb|1CQD|A Chain A, The 2.1 Angstrom Structure Of A Cysteine Protease With Proline Specificity From Ginger Rhizome, Zingiber Officinale Length = 221 Back     alignment and structure
>pdb|3P5U|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|1S4V|A Chain A, The 2.0 A Crystal Structure Of The Kdel-Tailed Cysteine Endopeptidase Functioning In Programmed Cell Death Of Ricinus Communis Endosperm Length = 229 Back     alignment and structure
>pdb|2FO5|A Chain A, Crystal Structure Of Recombinant Barley Cysteine Endoprotease B Isoform 2 (Ep-B2) In Complex With Leupeptin Length = 262 Back     alignment and structure
>pdb|1IWD|A Chain A, Proposed Amino Acid Sequence And The 1.63 Angstrom X-ray Crystal Structure Of A Plant Cysteine Protease Ervatamin B: Insight Into The Structural Basis Of Its Stability And Substrate Specificity Length = 215 Back     alignment and structure
>pdb|2ACT|A Chain A, Crystallographic Refinement Of The Structure Of Actinidin At 1.7 Angstroms Resolution By Fast Fourier Least-Squares Methods Length = 220 Back     alignment and structure
>pdb|2PNS|A Chain A, 1.9 Angstrom Resolution Crystal Structure Of A Plant Cysteine Protease Ervatamin-C Refinement With Cdna Derived Amino Acid Sequence Length = 208 Back     alignment and structure
>pdb|3BCN|A Chain A, Crystal Structure Of A Papain-Like Cysteine Protease Ervatamin-A Complexed With Irreversible Inhibitor E-64 Length = 209 Back     alignment and structure
>pdb|1O0E|A Chain A, 1.9 Angstrom Crystal Structure Of A Plant Cysteine Protease Ervatamin C Length = 208 Back     alignment and structure
>pdb|1YAL|A Chain A, Carica Papaya Chymopapain At 1.7 Angstroms Resolution Length = 218 Back     alignment and structure
>pdb|1PPO|A Chain A, Determination Of The Structure Of Papaya Protease Omega Length = 216 Back     alignment and structure
>pdb|2BDZ|A Chain A, Mexicain From Jacaratia Mexicana Length = 214 Back     alignment and structure
>pdb|1MEG|A Chain A, Crystal Structure Of A Caricain D158e Mutant In Complex With E-64 Length = 216 Back     alignment and structure
>pdb|3U8E|A Chain A, Crystal Structure Of Cysteine Protease From Bulbs Of Crocus Sativus At 1.3 A Resolution Length = 222 Back     alignment and structure
>pdb|1PCI|A Chain A, Procaricain Length = 322 Back     alignment and structure
>pdb|3F75|A Chain A, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 224 Back     alignment and structure
>pdb|2B1M|A Chain A, Crystal Structure Of A Papain-Fold Protein Without The Catalytic Cysteine From Seeds Of Pachyrhizus Erosus Length = 246 Back     alignment and structure
>pdb|3H7D|A Chain A, The Crystal Structure Of The Cathepsin K Variant M5 In Compl Chondroitin-4-Sulfate Length = 215 Back     alignment and structure
>pdb|3IOQ|A Chain A, Crystal Structure Of The Carica Candamarcensis Cysteine Protease Cms1ms2 In Complex With E-64 Length = 213 Back     alignment and structure
>pdb|7PCK|A Chain A, Crystal Structure Of Wild Type Human Procathepsin K Length = 314 Back     alignment and structure
>pdb|1MEM|A Chain A, Crystal Structure Of Cathepsin K Complexed With A Potent Vinyl Sulfone Inhibitor Length = 215 Back     alignment and structure
>pdb|3OVZ|A Chain A, Cathepsin K In Complex With A Covalent Inhibitor With A Ketoamide Warhead Length = 213 Back     alignment and structure
>pdb|1SNK|A Chain A, Cathepsin K Complexed With Carbamate Derivatized Norleucine Aldehyde Length = 214 Back     alignment and structure
>pdb|1U9V|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin K In Complex With The Covalent Inhibitor Nvp-Abe854 Length = 217 Back     alignment and structure
>pdb|2F7D|A Chain A, A Mutant Rabbit Cathepsin K With A Nitrile Inhibitor Length = 215 Back     alignment and structure
>pdb|1VSN|A Chain A, Crystal Structure Of A Potent Small Molecule Inhibitor Bound To Cathepsin K Length = 215 Back     alignment and structure
>pdb|1KHP|A Chain A, Monoclinic Form Of Papain/zlfg-dam Covalent Complex Length = 212 Back     alignment and structure
>pdb|1PIP|A Chain A, Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Ala-Ala-P- Nitroanilide Complex At 1.7 Angstroms Resolution: Noncovalent Binding Mode Of A Common Sequence Of Endogenous Thiol Protease Inhibitors Length = 212 Back     alignment and structure
>pdb|1PPP|A Chain A, Crystal Structure Of Papain-E64-C Complex. Binding Diversity Of E64-C To Papain S2 And S3 Subsites Length = 212 Back     alignment and structure
>pdb|1MS6|A Chain A, Dipeptide Nitrile Inhibitor Bound To Cathepsin S. Length = 222 Back     alignment and structure
>pdb|3N3G|A Chain A, 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitrile As Cathepsin S Inhibitors: N3, Not N1 Is Critically Important Length = 217 Back     alignment and structure
>pdb|3OVX|A Chain A, Cathepsin S In Complex With A Covalent Inhibitor With An Aldehyde Warhead Length = 218 Back     alignment and structure
>pdb|2F1G|A Chain A, Cathepsin S In Complex With Non-Covalent 2-(Benzoxazol-2-Ylamino)- Acetamide Length = 220 Back     alignment and structure
>pdb|2G6D|A Chain A, Human Cathepsin S Mutant With Vinyl Sulfone Inhibitor Cra- 14009 Length = 217 Back     alignment and structure
>pdb|2FQ9|A Chain A, Cathepsin S With Nitrile Inhibitor Length = 225 Back     alignment and structure
>pdb|2FYE|A Chain A, Mutant Human Cathepsin S With Irreversible Inhibitor Cra- 14013 Length = 217 Back     alignment and structure
>pdb|3IMA|A Chain A, Complex Strcuture Of Tarocystatin And Papain Length = 212 Back     alignment and structure
>pdb|1NPZ|A Chain A, Crystal Structures Of Cathepsin S Inhibitor Complexes Length = 217 Back     alignment and structure
>pdb|2CIO|A Chain A, The High Resolution X-Ray Structure Of Papain Complexed With Fragments Of The Trypanosoma Brucei Cysteine Protease Inhibitor Icp Length = 212 Back     alignment and structure
>pdb|1STF|E Chain E, The Refined 2.4 Angstroms X-Ray Crystal Structure Of Recombinant Human Stefin B In Complex With The Cysteine Proteinase Papain: A Novel Type Of Proteinase Inhibitor Interaction Length = 212 Back     alignment and structure
>pdb|2C0Y|A Chain A, The Crystal Structure Of A Cys25ala Mutant Of Human Procathepsin S Length = 315 Back     alignment and structure
>pdb|3TNX|A Chain A, Structure Of The Precursor Of A Thermostable Variant Of Papain At 2.6 Angstroem Resolution Length = 363 Back     alignment and structure
>pdb|3KWN|A Chain A, Cathepsin S In Complex With Thioether Acetamide P3 Inhibitor Length = 219 Back     alignment and structure
>pdb|3MPE|A Chain A, Crystal Structure Of Human Cathepsin-S C25s Mutant With Bound Drug Length = 220 Back     alignment and structure
>pdb|3IEJ|A Chain A, Pyrazole-Based Cathepsin S Inhibitors With Arylalkynes As P1 Binding Elements Length = 222 Back     alignment and structure
>pdb|3HWN|A Chain A, Cathepsin L With Az13010160 Length = 258 Back     alignment and structure
>pdb|3OF8|A Chain A, Structural Basis For Reversible And Irreversible Inhibition Of Human Cathepsin L By Their Respective Dipeptidyl Glyoxal And Diazomethylketone Inhibitors Length = 221 Back     alignment and structure
>pdb|3H89|A Chain A, A Combined Crystallographic And Molecular Dynamics Study Of Cathepsin-L Retro-Binding Inhibitors(Compound 4) Length = 220 Back     alignment and structure
>pdb|3HHA|A Chain A, Crystal Structure Of Cathepsin L In Complex With Az12878478 Length = 220 Back     alignment and structure
>pdb|1GLO|A Chain A, Crystal Structure Of Cys25ser Mutant Of Human Cathepsin S Length = 217 Back     alignment and structure
>pdb|1CJL|A Chain A, Crystal Structure Of A Cysteine Protease Proform Length = 312 Back     alignment and structure
>pdb|3QT4|A Chain A, Structure Of Digestive Procathepsin L 3 Of Tenebrio Molitor Larval Midgut Length = 329 Back     alignment and structure
>pdb|3IV2|A Chain A, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant Length = 220 Back     alignment and structure
>pdb|2NQD|B Chain B, Crystal Structure Of Cysteine Protease Inhibitor, Chagasin, In Complex With Human Cathepsin L Length = 221 Back     alignment and structure
>pdb|1CS8|A Chain A, Crystal Structure Of Procathepsin L Length = 316 Back     alignment and structure
>pdb|3BC3|A Chain A, Exploring Inhibitor Binding At The S Subsites Of Cathepsin L Length = 220 Back     alignment and structure
>pdb|3KSE|A Chain A, Unreduced Cathepsin L In Complex With Stefin A Length = 220 Back     alignment and structure
>pdb|1GEC|E Chain E, Glycyl Endopeptidase-complex With Benzyloxycarbonyl-leucine-valine- Glycine-methylene Covalently Bound To Cysteine 25 Length = 216 Back     alignment and structure
>pdb|1FH0|A Chain A, Crystal Structure Of Human Cathepsin V Complexed With An Irreversible Vinyl Sulfone Inhibitor Length = 221 Back     alignment and structure
>pdb|3H6S|A Chain A, Strucure Of Clitocypin - Cathepsin V Complex Length = 221 Back     alignment and structure
>pdb|2VHS|A Chain A, Cathsilicatein, A Chimera Length = 217 Back     alignment and structure
>pdb|8PCH|A Chain A, Crystal Structure Of Porcine Cathepsin H Determined At 2.1 Angstrom Resolution: Location Of The Mini-Chain C-Terminal Carboxyl Group Defines Cathepsin H Aminopeptidase Function Length = 220 Back     alignment and structure
>pdb|2O6X|A Chain A, Crystal Structure Of Procathepsin L1 From Fasciola Hepatica Length = 310 Back     alignment and structure
>pdb|3QJ3|A Chain A, Structure Of Digestive Procathepsin L2 Proteinase From Tenebrio Molitor Larval Midgut Length = 331 Back     alignment and structure
>pdb|2P7U|A Chain A, The Crystal Structure Of Rhodesain, The Major Cysteine Protease Of T. Brucei Rhodesiense, Bound To Inhibitor K777 Length = 215 Back     alignment and structure
>pdb|1ICF|A Chain A, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 175 Back     alignment and structure
>pdb|1YVB|A Chain A, The Plasmodium Falciparum Cysteine Protease Falcipain-2 Length = 241 Back     alignment and structure
>pdb|1AIM|A Chain A, Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluoromethylketone Length = 215 Back     alignment and structure
>pdb|1EWP|A Chain A, Cruzain Bound To Mor-Leu-Hpq Length = 215 Back     alignment and structure
>pdb|1MHW|A Chain A, Design Of Non-covalent Inhibitors Of Human Cathepsin L. From The 96- Residue Proregion To Optimized Tripeptides Length = 175 Back     alignment and structure
>pdb|3PNR|A Chain A, Structure Of Pbicp-C In Complex With Falcipain-2 Length = 240 Back     alignment and structure
>pdb|3IUT|A Chain A, The Crystal Structure Of Cruzain In Complex With A Tetrafluorophenoxymethyl Ketone Inhibitor Length = 221 Back     alignment and structure
>pdb|3HD3|A Chain A, High Resolution Crystal Structure Of Cruzain Bound To The Vinyl Sulfone Inhibitor Smdc-256047 Length = 215 Back     alignment and structure
>pdb|3BPM|A Chain A, Crystal Structure Of Falcipain-3 With Its Inhibitor, Leupeptin Length = 243 Back     alignment and structure
>pdb|1M6D|A Chain A, Crystal Structure Of Human Cathepsin F Length = 214 Back     alignment and structure
>pdb|3D6S|A Chain A, Crystal Structure Of Mite Allergen Der F 1 Length = 223 Back     alignment and structure
>pdb|3PDF|A Chain A, Discovery Of Novel Cyanamide-Based Inhibitors Of Cathepsin C Length = 441 Back     alignment and structure
>pdb|2AS8|A Chain A, Crystal Structure Of Mature And Fully Active Der P 1 Allergen Length = 222 Back     alignment and structure
>pdb|3RVW|A Chain A, Crystal Structure Of Der P 1 Complexed With Fab 4c1 Length = 222 Back     alignment and structure
>pdb|1JQP|A Chain A, Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric Cysteine Protease Of The Papain Family Length = 438 Back     alignment and structure
>pdb|1XKG|A Chain A, Crystal Structure Of The Major House Dust Mite Allergen Der P 1 In Its Pro Form At 1.61 A Resolution Length = 312 Back     alignment and structure
>pdb|3F5V|A Chain A, C2 Crystal Form Of Mite Allergen Der P 1 Length = 222 Back     alignment and structure
>pdb|1DEU|A Chain A, Crystal Structure Of Human Procathepsin X: A Cysteine Protease With The Proregion Covalently Linked To The Active Site Cysteine Length = 277 Back     alignment and structure
>pdb|1EF7|A Chain A, Crystal Structure Of Human Cathepsin X Length = 242 Back     alignment and structure
>pdb|3QSD|A Chain A, Structure Of Cathepsin B1 From Schistosoma Mansoni In Complex With Ca074 Inhibitor Length = 254 Back     alignment and structure
>pdb|1PBH|A Chain A, Crystal Structure Of Human Recombinant Procathepsin B At 3.2 Angstrom Resolution Length = 317 Back     alignment and structure
>pdb|1K3B|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 69 Back     alignment and structure
>pdb|3AI8|B Chain B, Cathepsin B In Complex With The Nitroxoline Length = 256 Back     alignment and structure
>pdb|3K9M|A Chain A, Cathepsin B In Complex With Stefin A Length = 254 Back     alignment and structure
>pdb|1GMY|A Chain A, Cathepsin B Complexed With Dipeptidyl Nitrile Inhibitor Length = 261 Back     alignment and structure
>pdb|3CBJ|A Chain A, Chagasin-cathepsin B Complex Length = 266 Back     alignment and structure
>pdb|1CTE|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 254 Back     alignment and structure
>pdb|4HWY|A Chain A, Trypanosoma Brucei Procathepsin B Solved From 40 Fs Free-electron Laser Pulse Data By Serial Femtosecond X-ray Crystallography Length = 340 Back     alignment and structure
>pdb|1CPJ|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 260 Back     alignment and structure
>pdb|3MOR|A Chain A, Crystal Structure Of Cathepsin B From Trypanosoma Brucei Length = 317 Back     alignment and structure
>pdb|3HHI|A Chain A, Crystal Structure Of Cathepsin B From T. Brucei In Complex With Ca074 Length = 325 Back     alignment and structure
>pdb|1MIR|A Chain A, Rat Procathepsin B Length = 322 Back     alignment and structure
>pdb|1QDQ|A Chain A, X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 Complex Length = 253 Back     alignment and structure
>pdb|1SP4|B Chain B, Crystal Structure Of Ns-134 In Complex With Bovine Cathepsin B: A Two Headed Epoxysuccinyl Inhibitor Extends Along The Whole Active Site Cleft Length = 205 Back     alignment and structure
>pdb|1ITO|A Chain A, Crystal Structure Analysis Of Bovine Spleen Cathepsin B- E64c Complex Length = 256 Back     alignment and structure
>pdb|1HUC|B Chain B, The Refined 2.15 Angstroms X-Ray Crystal Structure Of Human Liver Cathepsin B: The Structural Basis For Its Specificity Length = 205 Back     alignment and structure
>pdb|1ICF|B Chain B, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 42 Back     alignment and structure
>pdb|2JYE|A Chain A, Human Granulin A Length = 72 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query341
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 1e-130
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 1e-128
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 1e-127
1cqd_A221 Protein (protease II); cysteine protease, glycopro 1e-126
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 1e-126
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 1e-125
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 1e-124
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 1e-124
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 1e-123
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 1e-123
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 1e-123
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 1e-119
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 1e-117
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 1e-117
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 1e-115
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 1e-115
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 1e-114
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 1e-114
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 1e-114
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 1e-113
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 1e-112
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 1e-112
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 1e-112
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 1e-112
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 1e-111
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 1e-109
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 1e-109
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 1e-107
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 1e-106
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 1e-104
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 2e-92
3u8e_A222 Papain-like cysteine protease; papain-like cystein 2e-86
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 3e-81
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 2e-77
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 2e-76
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 7e-74
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 1e-63
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 3e-60
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 9e-59
2jye_A72 Granulin A; epithelin, human, stack of hairpins, a 4e-14
2jyt_A69 Granulin-5, granulin C; epithelin, human, stack of 7e-14
2jyv_A72 Granulin-2, granulin F; granulin C, epithelin, hum 2e-12
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 2e-09
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 8e-06
2e01_A457 Cysteine proteinase 1; bleomycin hydrolase, thiol 8e-05
2cb5_A453 Protein (bleomycin hydrolase); aminopeptidase, cys 5e-04
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Length = 262 Back     alignment and structure
 Score =  370 bits (953), Expect = e-130
 Identities = 113/224 (50%), Positives = 147/224 (65%), Gaps = 4/224 (1%)

Query: 39  GACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNHGI 98
           G+CWAFS   ++EGIN I TGSLVSLSEQELIDCD + N GC GGLMD A++++  N G+
Sbjct: 26  GSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNGGL 85

Query: 99  DTEKDYPYRGQAGQCNKQKLNRH---IVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGS 155
            TE  YPYR   G CN  +  ++   +V IDG++DVP N+E+ L +AV  QPVSV +  S
Sbjct: 86  ITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEAS 145

Query: 156 ERAFQLYSSGIFTGPCSTSLDHAVLIVGYD-SENGVDYWIIKNSWGRSWGMNGYMHMQRN 214
            +AF  YS G+FTG C T LDH V +VGY  +E+G  YW +KNSWG SWG  GY+ ++++
Sbjct: 146 GKAFMFYSEGVFTGECGTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKD 205

Query: 215 TGNSLGICGINMLASYPTKTGQNPPPSPPPGPTRCSLLTYCAAG 258
           +G S G+CGI M ASYP KT   P P+P         L   +  
Sbjct: 206 SGASGGLCGIAMEASYPVKTYSKPKPTPRRALGARESLNSSSVD 249


>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Length = 229 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Length = 216 Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Length = 221 Back     alignment and structure
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Length = 322 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Length = 218 Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Length = 214 Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Length = 215 Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} Length = 213 Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Length = 212 Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Length = 246 Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Length = 241 Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 224 Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Length = 315 Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Length = 243 Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Length = 314 Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Length = 220 Back     alignment and structure
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} Length = 331 Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Length = 218 Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Length = 310 Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Length = 215 Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Length = 215 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Length = 329 Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Length = 312 Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Length = 214 Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Length = 316 Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Length = 220 Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Length = 208 Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Length = 265 Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} Length = 222 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Length = 441 Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} PDB: 3mor_A* Length = 325 Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Length = 277 Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} PDB: 3s3q_A* 3s3r_A* Length = 254 Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Length = 317 Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Length = 266 Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Length = 291 Back     alignment and structure
>2jye_A Granulin A; epithelin, human, stack of hairpins, alternative splicing, cytokine, glycoprotein, polymorphism, secreted; NMR {Homo sapiens} Length = 72 Back     alignment and structure
>2jyt_A Granulin-5, granulin C; epithelin, human, stack of hairpins, alternative splicing, cytokine, glycoprotein, polymorphism, secreted; NMR {Homo sapiens} PDB: 2jyu_A Length = 69 Back     alignment and structure
>2jyv_A Granulin-2, granulin F; granulin C, epithelin, human, stack of hairpins, alternative splicing, cytokine, glycoprotein, polymorphism, secreted; NMR {Homo sapiens} Length = 72 Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 Back     alignment and structure
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A Length = 457 Back     alignment and structure
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A Length = 453 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query341
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 100.0
1cqd_A221 Protein (protease II); cysteine protease, glycopro 100.0
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 100.0
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 100.0
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 100.0
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 100.0
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 100.0
3u8e_A222 Papain-like cysteine protease; papain-like cystein 100.0
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 100.0
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 100.0
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 100.0
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 100.0
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 100.0
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 100.0
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 100.0
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 100.0
3tnx_A363 Papain; hydrolase, cytoplasm for recombinant expre 100.0
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 100.0
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 100.0
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 100.0
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 100.0
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 100.0
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 100.0
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 100.0
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 100.0
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 100.0
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 100.0
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 100.0
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 100.0
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 100.0
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 100.0
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 100.0
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 100.0
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 100.0
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 100.0
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 100.0
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 100.0
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 100.0
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 100.0
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 100.0
2cb5_A453 Protein (bleomycin hydrolase); aminopeptidase, cys 100.0
2e01_A457 Cysteine proteinase 1; bleomycin hydrolase, thiol 100.0
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 100.0
2jye_A72 Granulin A; epithelin, human, stack of hairpins, a 99.93
2jyv_A72 Granulin-2, granulin F; granulin C, epithelin, hum 99.91
2jyt_A69 Granulin-5, granulin C; epithelin, human, stack of 99.9
1fwo_A35 Oryzain beta chain; beta-hairpin stack fold, granu 99.47
1i8x_A30 Granulin-1; two beta-hairpin stack, cytokine; NMR 99.22
1g26_A31 Granulin A, HGA; granulin/epithelin protein repeat 99.22
1pxv_A183 Cysteine protease; hydrolase; 1.80A {Staphylococcu 97.2
1x9y_A367 Cysteine proteinase; half-barrel, barrel-sandwich- 97.04
1cv8_A174 Staphopain; cysteine protease, thiol protease, pap 96.99
3erv_A236 Putative C39-like peptidase; structural genomics, 91.25
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0 Back     alignment and structure
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1 Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Back     alignment and structure
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya} Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0 Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Back     alignment and structure
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A* Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A* Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Back     alignment and structure
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A Back     alignment and structure
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Back     alignment and structure
>2jye_A Granulin A; epithelin, human, stack of hairpins, alternative splicing, cytokine, glycoprotein, polymorphism, secreted; NMR {Homo sapiens} Back     alignment and structure
>2jyv_A Granulin-2, granulin F; granulin C, epithelin, human, stack of hairpins, alternative splicing, cytokine, glycoprotein, polymorphism, secreted; NMR {Homo sapiens} Back     alignment and structure
>2jyt_A Granulin-5, granulin C; epithelin, human, stack of hairpins, alternative splicing, cytokine, glycoprotein, polymorphism, secreted; NMR {Homo sapiens} PDB: 2jyu_A Back     alignment and structure
>1fwo_A Oryzain beta chain; beta-hairpin stack fold, granulin/epithelin-like protein repeats, hydrolase; NMR {Synthetic} SCOP: g.3.16.1 Back     alignment and structure
>1i8x_A Granulin-1; two beta-hairpin stack, cytokine; NMR {Synthetic} SCOP: g.3.16.1 PDB: 1qgm_A 1i8y_A Back     alignment and structure
>1g26_A Granulin A, HGA; granulin/epithelin protein repeats, beta-hairpin stack, cytokine; NMR {Synthetic} SCOP: g.3.16.1 Back     alignment and structure
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A Back     alignment and structure
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4 Back     alignment and structure
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1 Back     alignment and structure
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 341
d1yala_218 d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [ 2e-53
d1s4va_224 d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor 9e-51
d1ppoa_216 d.3.1.1 (A:) Caricain (protease omega) {Papaya (Ca 8e-49
d1cqda_216 d.3.1.1 (A:) Proline-specific cysteine protease {G 2e-48
d1aeca_218 d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwi 4e-47
d2oula1241 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falcip 2e-46
d1iwda_215 d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia 6e-46
d1o0ea_208 d.3.1.1 (A:) Ervatamin C {East indian rosebay (Erv 6e-45
d2h7ja1217 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sa 7e-45
g8pch.1228 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [Tax 2e-44
d1m6da_214 d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [Ta 8e-43
d1fh0a_221 d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens 1e-41
d2r6na1215 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sa 2e-41
d1khqa_212 d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId 2e-41
d1cs8a_316 d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens 3e-40
d1gmya_254 d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens 2e-39
d1me4a_215 d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 56 1e-35
d1deua_275 d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens 3e-34
d1xkga1302 d.3.1.1 (A:4-305) Major mite fecal allergen der p 4e-32
g1k3b.1233 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase 6e-32
d3gcba_458 d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (S 2e-09
d2cb5a_453 d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapi 2e-08
d1fwoa_35 g.3.16.1 (A:) Oryzain beta chain {Rice (Oryza sati 0.003
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Length = 218 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: Chymopapain
species: Papaya (Carica papaya) [TaxId: 3649]
 Score =  173 bits (439), Expect = 2e-53
 Identities = 95/205 (46%), Positives = 124/205 (60%), Gaps = 6/205 (2%)

Query: 29  RNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYA 88
           +N+ +C    G+CWAFS    +EGINKIVTG+L+ LSEQEL+DCD+      GG      
Sbjct: 17  KNQGAC----GSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDKHSYGCKGGY--QTT 70

Query: 89  YQFVIKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPV 148
               + N+G+ T K YPY+ +  +C         V I GYK VP N E   L A+  QP+
Sbjct: 71  SLQYVANNGVHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPL 130

Query: 149 SVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGY 208
           SV +    + FQLY SG+F GPC T LDHAV  VGY + +G +Y IIKNSWG +WG  GY
Sbjct: 131 SVLVEAGGKPFQLYKSGVFDGPCGTKLDHAVTAVGYGTSDGKNYIIIKNSWGPNWGEKGY 190

Query: 209 MHMQRNTGNSLGICGINMLASYPTK 233
           M ++R +GNS G CG+   + YP K
Sbjct: 191 MRLKRQSGNSQGTCGVYKSSYYPFK 215


>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Length = 224 Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Length = 216 Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Length = 216 Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Length = 218 Back     information, alignment and structure
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} Length = 241 Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Length = 215 Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Length = 208 Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Length = 217 Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Length = 214 Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Length = 221 Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Length = 215 Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Length = 212 Back     information, alignment and structure
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Length = 316 Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Length = 254 Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Length = 215 Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Length = 275 Back     information, alignment and structure
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Length = 302 Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Length = 458 Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 453 Back     information, alignment and structure
>d1fwoa_ g.3.16.1 (A:) Oryzain beta chain {Rice (Oryza sativa) [TaxId: 4530]} Length = 35 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query341
d1ppoa_216 Caricain (protease omega) {Papaya (Carica papaya) 100.0
d1yala_218 Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d1cqda_216 Proline-specific cysteine protease {Ginger rhizome 100.0
d1s4va_224 Vignain (bean endopeptidase) {Castor bean (Ricinus 100.0
d2oula1241 Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} 100.0
d1khqa_212 Papain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d1iwda_215 Ervatamin B {Adam's apple (Ervatamia coronaria) [T 100.0
d1aeca_218 Actinidin {Chinese gooseberry or kiwifruit (Actini 100.0
d1xkga1302 Major mite fecal allergen der p 1 {House-dust mite 100.0
d2h7ja1217 (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 960 100.0
d1cs8a_316 (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 960 100.0
d1o0ea_208 Ervatamin C {East indian rosebay (Ervatamia corona 100.0
d2r6na1215 (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 960 100.0
g8pch.1228 Cathepsin H {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d1fh0a_221 (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 960 100.0
d1m6da_214 Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1me4a_215 Cruzain {Trypanosoma cruzi [TaxId: 5693]} 100.0
g1k3b.1233 Cathepsin C (dipeptidyl peptidase I), catalytic do 100.0
d1deua_275 (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 960 100.0
d1gmya_254 (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 960 100.0
d3gcba_458 Bleomycin hydrolase {Baker's yeast (Saccharomyces 99.68
d2cb5a_453 Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 99.6
d1fwoa_35 Oryzain beta chain {Rice (Oryza sativa) [TaxId: 45 99.44
d1g26a_31 N-terminal domain of granulin-1 {Human (Homo sapie 99.23
d1i8ya_28 N-terminal domain of granulin-1 {Carp (Cyprinus ca 98.63
d1pxva_183 Staphopain SspB {Staphylococcus aureus [TaxId: 128 94.63
d1cv8a_173 Staphopain StpA {Staphylococcus aureus [TaxId: 128 94.12
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: Caricain (protease omega)
species: Papaya (Carica papaya) [TaxId: 3649]
Probab=100.00  E-value=1.8e-58  Score=415.08  Aligned_cols=216  Identities=48%  Similarity=0.885  Sum_probs=199.6

Q ss_pred             CCCCCCCccCCCCCCccCCCCcCCCCCchHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhCCCCCCCCCCCcHHHHHHHH
Q 019447           13 LSFTGHKLQMILLIQFRNKSSCLYLLGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFV   92 (341)
Q Consensus        13 lP~~~D~R~~g~vtpVkdQg~c~~~~GsCWAfA~~~alE~~~~i~~~~~~~LSeq~l~dc~~~~~~gC~GG~~~~a~~~l   92 (341)
                      ||.++|||++|+|+||||||.|    |||||||++++||++++++++..++||||+|++|.. ...+|.||+...+++++
T Consensus         1 LP~~~Dwr~~~~vtpV~dQg~c----GsCwAfa~~~~~e~~~~~~~~~~~~lS~q~l~~~~~-~~~~~~G~~~~~~~~~~   75 (216)
T d1ppoa_           1 LPENVDWRKKGAVTPVRHQGSC----GSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER-RSHGCKGGYPPYALEYV   75 (216)
T ss_dssp             CCSCEETTTTTCCCCCCBCCSS----BCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS-SSCTTBCCCHHHHHHHH
T ss_pred             CCCcccCCcCCCCCCcccCCcC----chHHHHHHHHHHHHHHHHHhCCCCCccHHHHhhhhh-ccCcccccccccccccc
Confidence            8999999999999999999999    999999999999999999999999999999999986 57889999999999999


Q ss_pred             HHhCCcccCCcccCCCCCCcccccccCCceeeeceeEecCCChHHHHHHHHHhCCcEEEEecccccccccCCceEeCCCC
Q 019447           93 IKNHGIDTEKDYPYRGQAGQCNKQKLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSGIFTGPCS  172 (341)
Q Consensus        93 ~~~~Gi~~E~~yPY~~~~~~C~~~~~~~~~~~i~~y~~i~~~~~~~ik~al~~GPV~v~i~~~~~~f~~y~~GIy~~~~~  172 (341)
                      .+. |+++|++|||......|...........+..+..+..+.+.+||++|++|||++++.+..+.|+.|++|||..+..
T Consensus        76 ~~~-G~~~e~~yPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gpv~~~~~~~~~~~~~y~~g~~~~~~~  154 (216)
T d1ppoa_          76 AKN-GIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCG  154 (216)
T ss_dssp             HHH-CBCBTTTSCCCSSCCCCCGGGCCSCCBCCCEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHHCCSSEECCSCC
T ss_pred             ccc-CccccccCCccccccccccccccccceeeccceeecccHHHHHHHHHhhCCCceeeeeccccceecCCcccccccc
Confidence            766 9999999999998888877665566666777777888889999999999999999999878899999999988877


Q ss_pred             CCCCceEEEEEeeecCCeeEEEEEcCCCCCCCCCcEEEEEccCCCCCCceeeeecccccccC
Q 019447          173 TSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKT  234 (341)
Q Consensus       173 ~~~~HaV~IVGyg~~~g~~yWiVkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~  234 (341)
                      ..++|||+|||||++++++|||||||||++|||+|||||+|+.++..+.|||++.++||++.
T Consensus       155 ~~~~Hav~iVGyg~~~~~~ywivrNSWG~~WGd~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~  216 (216)
T d1ppoa_         155 TKVDHAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTKN  216 (216)
T ss_dssp             SCCCEEEEEEEEEEETTEEEEEEECSBCSSSTBTTEEEEECCCSSSSCGGGTTSCCEEEECC
T ss_pred             ccCCcEEEEEeccccCCCceEEEECCCCCCcccCCEEEEEcCCCCCCCcCccccEeeeeecC
Confidence            88899999999999999999999999999999999999999988777899999999999873



>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Back     information, alignment and structure
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fwoa_ g.3.16.1 (A:) Oryzain beta chain {Rice (Oryza sativa) [TaxId: 4530]} Back     information, alignment and structure
>d1g26a_ g.3.16.1 (A:) N-terminal domain of granulin-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1i8ya_ g.3.16.1 (A:) N-terminal domain of granulin-1 {Carp (Cyprinus carpio) [TaxId: 7962]} Back     information, alignment and structure
>d1pxva_ d.3.1.1 (A:) Staphopain SspB {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1cv8a_ d.3.1.1 (A:) Staphopain StpA {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure