Citrus Sinensis ID: 019448
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 341 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LZG0 | 345 | Adenosine kinase 2 OS=Ara | yes | no | 0.991 | 0.979 | 0.831 | 1e-173 | |
| Q9SF85 | 344 | Adenosine kinase 1 OS=Ara | no | no | 0.991 | 0.982 | 0.825 | 1e-170 | |
| O49923 | 343 | Adenosine kinase OS=Physc | N/A | no | 0.997 | 0.991 | 0.670 | 1e-135 | |
| P55264 | 361 | Adenosine kinase OS=Mus m | yes | no | 0.991 | 0.936 | 0.594 | 1e-121 | |
| Q64640 | 361 | Adenosine kinase OS=Rattu | yes | no | 0.991 | 0.936 | 0.597 | 1e-120 | |
| P55263 | 362 | Adenosine kinase OS=Homo | yes | no | 0.994 | 0.936 | 0.577 | 1e-119 | |
| P55262 | 361 | Adenosine kinase OS=Crice | yes | no | 0.991 | 0.936 | 0.594 | 1e-118 | |
| Q54MB5 | 340 | Adenosine kinase OS=Dicty | yes | no | 0.958 | 0.961 | 0.465 | 2e-79 | |
| P78825 | 340 | Adenosine kinase OS=Schiz | yes | no | 0.953 | 0.955 | 0.442 | 5e-75 | |
| P47143 | 340 | Adenosine kinase OS=Sacch | yes | no | 0.944 | 0.947 | 0.412 | 4e-64 |
| >sp|Q9LZG0|ADK2_ARATH Adenosine kinase 2 OS=Arabidopsis thaliana GN=ADK2 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 606 bits (1563), Expect = e-173, Method: Compositional matrix adjust.
Identities = 281/338 (83%), Positives = 317/338 (93%)
Query: 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGA 63
+GILLGMGNPLLDIS+VVDD+FL KYDIKLNNAILAE+KHLP+YDEM+SK+NVEYIAGGA
Sbjct: 8 DGILLGMGNPLLDISAVVDDEFLTKYDIKLNNAILAEDKHLPMYDEMSSKFNVEYIAGGA 67
Query: 64 TQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVC 123
TQNSI+VAQWMLQIPGATSY+G IGKDK+GE MKK++ AGVNVHYYEDESA TGTC VC
Sbjct: 68 TQNSIKVAQWMLQIPGATSYMGSIGKDKYGEAMKKDATAAGVNVHYYEDESAPTGTCGVC 127
Query: 124 VVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAA 183
VVGGERSL+ANLSAANCYK +HLKKPENWALVEKAK++YIAGFFLTVSP+SIQLV+EHAA
Sbjct: 128 VVGGERSLIANLSAANCYKVDHLKKPENWALVEKAKFYYIAGFFLTVSPESIQLVSEHAA 187
Query: 184 ANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALK 243
ANNKVF MNLSAPFICEFFKD EK LPYMD++FGNETEARTFS+V GWET+DVE+IA+K
Sbjct: 188 ANNKVFTMNLSAPFICEFFKDVQEKFLPYMDFVFGNETEARTFSRVHGWETEDVEQIAIK 247
Query: 244 LSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 303
+SQ PKA+ KRT VITQGADPVVVA+DGK+KK+PVI LPK+KLVDTNGAGDAFVGGF+
Sbjct: 248 ISQLPKATGTYKRTTVITQGADPVVVAEDGKVKKYPVIPLPKEKLVDTNGAGDAFVGGFM 307
Query: 304 SQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
SQLV+EK IEECV+AGCY S+V+IQRSGCTYPEKP+FN
Sbjct: 308 SQLVKEKSIEECVKAGCYASNVVIQRSGCTYPEKPDFN 345
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Essential to sustain methyl recycling. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 2EC: 0 |
| >sp|Q9SF85|ADK1_ARATH Adenosine kinase 1 OS=Arabidopsis thaliana GN=ADK1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 596 bits (1537), Expect = e-170, Method: Compositional matrix adjust.
Identities = 279/338 (82%), Positives = 310/338 (91%)
Query: 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGA 63
+GILLGMGNPLLD+S+VVD FL+KYDIKLNNAILAE+KHLP+YDEM+ K+NVEYIAGGA
Sbjct: 7 DGILLGMGNPLLDVSAVVDQQFLDKYDIKLNNAILAEDKHLPMYDEMSQKFNVEYIAGGA 66
Query: 64 TQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVC 123
TQNSI+VAQWMLQ+PGATSY+G IGKDK+GE MKK++ AGV VHYYEDE+ TGTC VC
Sbjct: 67 TQNSIKVAQWMLQVPGATSYMGSIGKDKYGEAMKKDATAAGVYVHYYEDEATPTGTCGVC 126
Query: 124 VVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAA 183
V+GGERSL+ANLSAANCYK EHLKKPENWALVEKAK++YIAGFFLTVSP+SIQLV EHAA
Sbjct: 127 VLGGERSLIANLSAANCYKVEHLKKPENWALVEKAKFYYIAGFFLTVSPESIQLVREHAA 186
Query: 184 ANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALK 243
ANNKVF MNLSAPFICEFFKD EK LPYMDYIFGNETEARTFS+V GWETDDVE+IA+K
Sbjct: 187 ANNKVFTMNLSAPFICEFFKDVQEKCLPYMDYIFGNETEARTFSRVHGWETDDVEQIAIK 246
Query: 244 LSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 303
+SQ PKAS KRT VITQGADPVVVA+DGK+KK+PVI LPK+KLVDTNGAGDAFVGGFL
Sbjct: 247 MSQLPKASGTYKRTTVITQGADPVVVAEDGKVKKYPVIPLPKEKLVDTNGAGDAFVGGFL 306
Query: 304 SQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
SQLV K IEECVRAGCY S+V+IQRSGCTYPEKP+FN
Sbjct: 307 SQLVHGKGIEECVRAGCYASNVVIQRSGCTYPEKPDFN 344
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Essential to sustain methyl recycling. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|O49923|ADK_PHYPA Adenosine kinase OS=Physcomitrella patens subsp. patens GN=ADK PE=2 SV=1 | Back alignment and function description |
|---|
Score = 483 bits (1242), Expect = e-135, Method: Compositional matrix adjust.
Identities = 228/340 (67%), Positives = 272/340 (80%)
Query: 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIA 60
MA EG+LLGMGNPLLDIS VVDD FL KY + LNNAILAE+KHLP+Y E+A+ +VEYIA
Sbjct: 1 MASEGVLLGMGNPLLDISCVVDDAFLEKYGLTLNNAILAEDKHLPMYKELAANPDVEYIA 60
Query: 61 GGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTC 120
GGATQN+IR+AQWML ATSY GC+GKD++G+ M K + GVN+ Y DE TGTC
Sbjct: 61 GGATQNTIRIAQWMLGESNATSYFGCVGKDEYGDRMFKLASEGGVNIRYDVDEDLPTGTC 120
Query: 121 AVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAE 180
V VV GERSLVANLSAAN YK +HLKKPENWA VEKAKY Y AGFFLTVSP+S+ VA+
Sbjct: 121 GVLVVKGERSLVANLSAANKYKIDHLKKPENWAFVEKAKYIYSAGFFLTVSPESMMTVAK 180
Query: 181 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 240
HAA K +M+NL+APFIC+FFKD L ++ PY+D+IFGNE+EAR F++VQGWET+D + I
Sbjct: 181 HAAETGKYYMINLAAPFICQFFKDPLMELFPYVDFIFGNESEARAFAQVQGWETEDTKVI 240
Query: 241 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 300
A+KL+ PKA KR AVITQG DP +VA+DGK+ +FPV +PK+KLVDTN AGD+FVG
Sbjct: 241 AVKLAALPKAGGTHKRVAVITQGTDPTIVAEDGKVTEFPVTPIPKEKLVDTNAAGDSFVG 300
Query: 301 GFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEF 340
GFLSQLV K I +CVRAG Y + VIIQRSGCT+P KP F
Sbjct: 301 GFLSQLVLGKDIAQCVRAGNYAASVIIQRSGCTFPSKPSF 340
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Can also act on the cytokinin isopentenyladenosine to produce isopentenyladenosine monophosphate. Physcomitrella patens subsp. patens (taxid: 145481) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|P55264|ADK_MOUSE Adenosine kinase OS=Mus musculus GN=Adk PE=1 SV=2 | Back alignment and function description |
|---|
Score = 435 bits (1118), Expect = e-121, Method: Compositional matrix adjust.
Identities = 202/340 (59%), Positives = 262/340 (77%), Gaps = 2/340 (0%)
Query: 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGA 63
E +L GMGNPLLDIS+VVD DFL+KY +K N+ ILAE+KH L+DE+ K+ VEY AGG+
Sbjct: 22 ENVLFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGS 81
Query: 64 TQNSIRVAQWMLQIP-GATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAV 122
TQNS++VAQW++Q P A ++ GCIG DKFGE +K+ + A V+ HYYE TGTCA
Sbjct: 82 TQNSMKVAQWLIQEPHKAATFFGCIGIDKFGEILKRKAADAHVDAHYYEQNEQPTGTCAA 141
Query: 123 CVVGGERSLVANLSAANCYKSE-HLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEH 181
C+ GG RSLVANL+AANCYK E HL NW LVEKA+ +YIAGFFLTVSP+S+ VA +
Sbjct: 142 CITGGNRSLVANLAAANCYKKEKHLDLERNWVLVEKARVYYIAGFFLTVSPESVLKVARY 201
Query: 182 AAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIA 241
AA NN+VF +NLSAPFI +FFK+AL V+PY+D +FGNETEA TF++ QG+ET D++EIA
Sbjct: 202 AAENNRVFTLNLSAPFISQFFKEALMDVMPYVDILFGNETEAATFAREQGFETKDIKEIA 261
Query: 242 LKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 301
K PK + R+RT + TQG D +VA + + FPV+ +++++DTNGAGDAFVGG
Sbjct: 262 KKAQALPKVNSKRQRTVIFTQGRDDTIVAAENDVTAFPVLDQNQEEIIDTNGAGDAFVGG 321
Query: 302 FLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
FLSQLV +KP+ EC+RAG Y + VII+R+GCT+PEKP+F+
Sbjct: 322 FLSQLVSDKPLTECIRAGHYAASVIIRRTGCTFPEKPDFH 361
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Serves as a potential regulator of concentrations of extracellular adenosine and intracellular adenine nucleotides. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|Q64640|ADK_RAT Adenosine kinase OS=Rattus norvegicus GN=Adk PE=1 SV=3 | Back alignment and function description |
|---|
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 203/340 (59%), Positives = 259/340 (76%), Gaps = 2/340 (0%)
Query: 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGA 63
E +L GMGNPLLDIS+VVD DFL+KY +K N+ ILAE+KH L+DE+ K+ VEY AGG+
Sbjct: 22 ENVLFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGS 81
Query: 64 TQNSIRVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAV 122
TQNS++VAQWM+Q P A ++ GCIG DKFGE +K + A V+ HYYE TGTCA
Sbjct: 82 TQNSMKVAQWMIQEPHRAATFFGCIGIDKFGEILKSKAADAHVDAHYYEQNEQPTGTCAA 141
Query: 123 CVVGGERSLVANLSAANCYKSE-HLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEH 181
C+ GG RSLVANL+AANCYK E HL NW LVEKA+ +YIAGFFLTVSP+S+ VA +
Sbjct: 142 CITGGNRSLVANLAAANCYKKEKHLDLENNWMLVEKARVYYIAGFFLTVSPESVLKVARY 201
Query: 182 AAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIA 241
AA NN+ F +NLSAPFI +FFK+AL +V+PY+D +FGNETEA TF++ QG+ET D++EIA
Sbjct: 202 AAENNRTFTLNLSAPFISQFFKEALMEVMPYVDILFGNETEAATFAREQGFETKDIKEIA 261
Query: 242 LKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 301
K PK + R+RT + TQG D +VA + FPV+ ++++VDTNGAGDAFVGG
Sbjct: 262 RKTQALPKVNSKRQRTVIFTQGRDDTIVATGNDVTAFPVLDQNQEEIVDTNGAGDAFVGG 321
Query: 302 FLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
FLSQLV KP+ EC+RAG Y + VII+R+GCT+PEKP+F+
Sbjct: 322 FLSQLVSNKPLTECIRAGHYAASVIIRRTGCTFPEKPDFH 361
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Serves as a potential regulator of concentrations of extracellular adenosine and intracellular adenine nucleotides. Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|P55263|ADK_HUMAN Adenosine kinase OS=Homo sapiens GN=ADK PE=1 SV=2 | Back alignment and function description |
|---|
Score = 427 bits (1099), Expect = e-119, Method: Compositional matrix adjust.
Identities = 197/341 (57%), Positives = 261/341 (76%), Gaps = 2/341 (0%)
Query: 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGG 62
+E IL GMGNPLLDIS+VVD DFL+KY +K N+ ILAE+KH L+DE+ K+ VEY AGG
Sbjct: 22 RENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGG 81
Query: 63 ATQNSIRVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCA 121
+TQNSI+VAQWM+Q P A ++ GCIG DKFGE +K+ + A V+ HYYE TGTCA
Sbjct: 82 STQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCA 141
Query: 122 VCVVGGERSLVANLSAANCYKSE-HLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAE 180
C+ G RSL+ANL+AANCYK E HL +NW LVEKA+ YIAGFFLTVSP+S+ VA
Sbjct: 142 ACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLKVAH 201
Query: 181 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 240
HA+ NN++F +NLSAPFI +F+K++L KV+PY+D +FGNETEA TF++ QG+ET D++EI
Sbjct: 202 HASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEI 261
Query: 241 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 300
A K PK + R+R + TQG D ++A + ++ F V+ + +++DTNGAGDAFVG
Sbjct: 262 AKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVG 321
Query: 301 GFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
GFLSQLV +KP+ EC+RAG Y + +II+R+GCT+PEKP+F+
Sbjct: 322 GFLSQLVSDKPLTECIRAGHYAASIIIRRTGCTFPEKPDFH 362
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Serves as a potential regulator of concentrations of extracellular adenosine and intracellular adenine nucleotides. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|P55262|ADK_CRIGR Adenosine kinase OS=Cricetulus griseus GN=ADK PE=1 SV=2 | Back alignment and function description |
|---|
Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/340 (59%), Positives = 257/340 (75%), Gaps = 2/340 (0%)
Query: 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGA 63
E +L GMGNPLLDIS+VVD DFL+KY +K N+ ILAEEKH L+DE+ K+ VEY AGG+
Sbjct: 22 ENVLFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEEKHKELFDELVRKFKVEYHAGGS 81
Query: 64 TQNSIRVAQWMLQIP-GATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAV 122
TQNSI+VAQWM+Q P A ++ GCIG DKFGE +K + A V+ HYYE TGTCA
Sbjct: 82 TQNSIKVAQWMIQKPHKAATFFGCIGIDKFGEILKSKAAEAHVDAHYYEQNEQPTGTCAA 141
Query: 123 CVVGGERSLVANLSAANCYKSE-HLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEH 181
C+ G RSLVANL+AANCYK E HL NW LVEKA+ +YIAGFFLTVSP+S+ VA +
Sbjct: 142 CITGDNRSLVANLAAANCYKKEKHLDLENNWVLVEKARVYYIAGFFLTVSPESVLKVARY 201
Query: 182 AAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIA 241
AA NN++F +NLSAPFI +FFK++L +V+PY+D +FGNETEA TF++ QG+ET D++EIA
Sbjct: 202 AAENNRIFTLNLSAPFISQFFKESLMEVMPYVDILFGNETEAATFAREQGFETKDIKEIA 261
Query: 242 LKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 301
K K + R RT V TQG D VVA + ++ F V+ + +++DTNGAGDAFVGG
Sbjct: 262 KKAQALAKVNSKRPRTVVFTQGRDDTVVATENEVMAFAVLDQNQKEIIDTNGAGDAFVGG 321
Query: 302 FLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
FLSQLV KP+ EC+RAG Y + VII+R+GCT+PEKP+F+
Sbjct: 322 FLSQLVYNKPLTECIRAGHYAASVIIRRTGCTFPEKPDFH 361
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Serves as a potential regulator of concentrations of extracellular adenosine and intracellular adenine nucleotides. Cricetulus griseus (taxid: 10029) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|Q54MB5|ADK_DICDI Adenosine kinase OS=Dictyostelium discoideum GN=adk PE=3 SV=2 | Back alignment and function description |
|---|
Score = 296 bits (757), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 153/329 (46%), Positives = 210/329 (63%), Gaps = 2/329 (0%)
Query: 7 LLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQN 66
+L GNPLLD+S+ V+ L+KY++KL NAILAE+KHLPLY E+ S VEYI GGA QN
Sbjct: 6 ILCAGNPLLDLSTHVEMAILDKYELKLGNAILAEDKHLPLYGEIKSG-KVEYIPGGAAQN 64
Query: 67 SIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVG 126
+ RV QWML+ Y GC+G D+ +K ++ GV Y D SA TG CAV +
Sbjct: 65 TSRVCQWMLKDKQTVCYTGCVGTDENATILKTATESNGVVTKYQVDSSAPTGACAVLINH 124
Query: 127 GERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANN 186
ERS+V NL AAN +K H + E A+V A++FY+ G+FLTVSPDS + +HAA N+
Sbjct: 125 KERSMVTNLGAANNFKIAHFQTEEMKAIVNSAQFFYLVGYFLTVSPDSAVHLGKHAAEND 184
Query: 187 KVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQ 246
K F+ L+APF+ +FF D + ++LPY+D +F NE+EA T + W +D+ IA KL+
Sbjct: 185 KPFLYGLAAPFLIDFFFDKVSELLPYVDIVFANESEAATLGRKMNW-GEDLTVIAEKLAA 243
Query: 247 WPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQL 306
W K + R RT V TQG D +V Q+G L K+ I + + ++D N AGD+F GGFL+
Sbjct: 244 WEKVNTKRTRTVVFTQGPDATLVFQNGVLTKYNPIKVATEDILDLNAAGDSFCGGFLAAY 303
Query: 307 VQEKPIEECVRAGCYTSHVIIQRSGCTYP 335
+ I +CV AG Y S II+++G T P
Sbjct: 304 SNGQEIAKCVEAGHYASWEIIRQNGATVP 332
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|P78825|ADK_SCHPO Adenosine kinase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ado1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 281 bits (719), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 147/332 (44%), Positives = 210/332 (63%), Gaps = 7/332 (2%)
Query: 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQ 65
IL G+ NPLLD + L KY +K N+A+LA E + +Y E V Y AGGA Q
Sbjct: 5 ILFGLENPLLDYYVGGETATLEKYGLKSNDAVLASESQMGIYKEPC----VSYSAGGAAQ 60
Query: 66 NSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV 125
NS R AQ++L P +T + GC+G+DKF + + ++++ AG+ + D + TG CAV +
Sbjct: 61 NSCRAAQYVLP-PNSTVFAGCVGQDKFADMLLESNEKAGLRSEFSVDPTTPTGVCAVVLS 119
Query: 126 GGE--RSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAA 183
RSL NL AAN YK + L++P W VE+AK Y+ GF LTVSP+S+ +A+HA
Sbjct: 120 NNNKNRSLCTNLGAANNYKLKDLQQPNVWKFVEEAKVIYVGGFHLTVSPESMLCLAQHAN 179
Query: 184 ANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALK 243
NNK ++MNLSAPF+ +FFK+ ++ V+PY DY+ GNE E ++ + G ++ DV+EIAL
Sbjct: 180 ENNKPYIMNLSAPFLSQFFKEQMDSVIPYCDYVIGNEAEILSYGENHGIKSTDVQEIALA 239
Query: 244 LSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 303
LS K ++ R R VITQGAD +VA+DGK+ + +P +++VDTNGAGDAF GGF+
Sbjct: 240 LSSVEKVNKKRTRVVVITQGADATIVAKDGKVTTYKPNRVPSEEIVDTNGAGDAFAGGFI 299
Query: 304 SQLVQEKPIEECVRAGCYTSHVIIQRSGCTYP 335
+ L Q + I+ V G + I+ SG T P
Sbjct: 300 AALSQGQGIDYAVTLGHWLGQECIKVSGTTLP 331
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
| >sp|P47143|ADK_YEAST Adenosine kinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ADO1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 245 bits (625), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 195/339 (57%), Gaps = 17/339 (5%)
Query: 7 LLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKH----LPLYDEMASKYNVEYIAGG 62
L+ +GNPLLD + V ++L KY +K N+AIL + K + ++DE+ + +AGG
Sbjct: 5 LVVLGNPLLDFQADVTAEYLAKYSLKENDAILVDAKSGDAKMAIFDELLQMPETKLVAGG 64
Query: 63 ATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAV 122
A QN+ R A ++L G Y G +GKDKF E + ++ AGV Y TG CA
Sbjct: 65 AAQNTARGAAYVLG-AGQVVYFGSVGKDKFSERLLNENEKAGVKSMYQVQNDIGTGKCAA 123
Query: 123 CVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHA 182
+ G RSLV +L AAN + +HL K +W LVE AK FYI GF LTVSPD+I + +HA
Sbjct: 124 LITGHNRSLVTDLGAANFFTPDHLDK--HWDLVEAAKLFYIGGFHLTVSPDAIVKLGQHA 181
Query: 183 AANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETD----DVE 238
N+K F++N SAPFI FKDAL +VLPY I NE+EA F ++ D D+E
Sbjct: 182 KENSKPFVLNFSAPFIPHVFKDALARVLPYATVIIANESEAEAF--CDAFQLDCANTDLE 239
Query: 239 EIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAF 298
IA ++ K S + K T + T G +P VV +PV L K+VDTNGAGDAF
Sbjct: 240 AIAQRIV---KDSPVEK-TVIFTHGVEPTVVVSSKGTSTYPVKPLDSSKIVDTNGAGDAF 295
Query: 299 VGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEK 337
GGF++ L + + +E + G + + + IQ G +YP +
Sbjct: 296 AGGFMAGLTKGEDLETSIDMGQWLAALSIQEVGPSYPSE 334
|
ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. ADO1 does not play a major role in adenine utilization in yeast. Its physiological role could primarily be to recycle adenosine produced by the methyl cycle. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: . EC: 2 EC: 0 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 341 | ||||||
| 225449018 | 341 | PREDICTED: adenosine kinase 2 [Vitis vin | 1.0 | 1.0 | 0.891 | 0.0 | |
| 225449016 | 341 | PREDICTED: adenosine kinase 2 [Vitis vin | 1.0 | 1.0 | 0.888 | 0.0 | |
| 224109788 | 341 | predicted protein [Populus trichocarpa] | 0.997 | 0.997 | 0.879 | 1e-178 | |
| 296086003 | 332 | unnamed protein product [Vitis vinifera] | 0.973 | 1.0 | 0.891 | 1e-178 | |
| 296086001 | 332 | unnamed protein product [Vitis vinifera] | 0.973 | 1.0 | 0.888 | 1e-178 | |
| 118484212 | 341 | unknown [Populus trichocarpa] | 0.997 | 0.997 | 0.876 | 1e-178 | |
| 255581753 | 342 | adenosine kinase, putative [Ricinus comm | 0.991 | 0.988 | 0.875 | 1e-178 | |
| 224100781 | 341 | predicted protein [Populus trichocarpa] | 1.0 | 1.0 | 0.862 | 1e-178 | |
| 357440379 | 341 | Adenosine kinase [Medicago truncatula] g | 1.0 | 1.0 | 0.862 | 1e-176 | |
| 211906446 | 341 | adenosine kinase [Gossypium hirsutum] | 0.997 | 0.997 | 0.876 | 1e-176 |
| >gi|225449018|ref|XP_002272669.1| PREDICTED: adenosine kinase 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/341 (89%), Positives = 324/341 (95%)
Query: 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIA 60
MA EGILLGMGNPLLDISSVVD++FL KYDIKLNNAILAE+KHLP+YDEMASKYNVEYIA
Sbjct: 1 MAYEGILLGMGNPLLDISSVVDEEFLQKYDIKLNNAILAEDKHLPMYDEMASKYNVEYIA 60
Query: 61 GGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTC 120
GGATQNSIRV QWMLQIPGATSY+GCIGKDKFGEEMKKNSKLAGVNVHY EDE+A TGTC
Sbjct: 61 GGATQNSIRVCQWMLQIPGATSYMGCIGKDKFGEEMKKNSKLAGVNVHYREDETAPTGTC 120
Query: 121 AVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAE 180
AVCVVGGERSL+ANLSAANCYKSEHLK+PENWALVEKAKYFYIAGFFLTVSP+SI LVAE
Sbjct: 121 AVCVVGGERSLIANLSAANCYKSEHLKRPENWALVEKAKYFYIAGFFLTVSPESILLVAE 180
Query: 181 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 240
HAAANNKVFMMNLSAPFICEFFKD EK LPYMDY+FGNETEARTF+KV GWETD+VEEI
Sbjct: 181 HAAANNKVFMMNLSAPFICEFFKDQQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEI 240
Query: 241 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 300
A+K+SQWPKAS KR VITQGADPVVVA+DGK+K FPVI+LPK+KLVDTNGAGDAFVG
Sbjct: 241 AIKISQWPKASGTHKRITVITQGADPVVVAEDGKVKSFPVILLPKEKLVDTNGAGDAFVG 300
Query: 301 GFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
GFLSQLVQEKPIEECVRAGCY SHVIIQRSGCTYPEKP+F+
Sbjct: 301 GFLSQLVQEKPIEECVRAGCYASHVIIQRSGCTYPEKPDFS 341
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225449016|ref|XP_002272337.1| PREDICTED: adenosine kinase 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/341 (88%), Positives = 324/341 (95%)
Query: 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIA 60
MA EGILLGMGNPLLDISSVVD++FL +YDIKLNNAILAE+KHLP+YDEMASKYNVEYIA
Sbjct: 1 MAYEGILLGMGNPLLDISSVVDEEFLQRYDIKLNNAILAEDKHLPMYDEMASKYNVEYIA 60
Query: 61 GGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTC 120
GGATQNSIRV QWMLQIPGATSY+GCIGKDKFGEEMKKNSKLAGVNVHY EDE+A TGTC
Sbjct: 61 GGATQNSIRVCQWMLQIPGATSYMGCIGKDKFGEEMKKNSKLAGVNVHYREDETAPTGTC 120
Query: 121 AVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAE 180
AVCVVGGERSL+ANLSAANCYKSEHLK+PENWALVEKAKYFYIAGFFLTVSP+SI LVAE
Sbjct: 121 AVCVVGGERSLIANLSAANCYKSEHLKRPENWALVEKAKYFYIAGFFLTVSPESILLVAE 180
Query: 181 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 240
HAAANNKVFMMNLSAPFICEFFKD EK LPYMDY+FGNETEARTFS+V GWETD+VEEI
Sbjct: 181 HAAANNKVFMMNLSAPFICEFFKDQQEKALPYMDYVFGNETEARTFSRVHGWETDNVEEI 240
Query: 241 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 300
A+K+SQWPKAS KR VITQGADPVVVA+DGK+K FPVI+LPK+KLVDTNGAGDAFVG
Sbjct: 241 AIKISQWPKASGTHKRITVITQGADPVVVAEDGKVKSFPVILLPKEKLVDTNGAGDAFVG 300
Query: 301 GFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
GFLSQLVQEKPIEECVRAGCY SHVIIQRSGCTYPEKP+F+
Sbjct: 301 GFLSQLVQEKPIEECVRAGCYASHVIIQRSGCTYPEKPDFS 341
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224109788|ref|XP_002315310.1| predicted protein [Populus trichocarpa] gi|118483900|gb|ABK93840.1| unknown [Populus trichocarpa] gi|222864350|gb|EEF01481.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust.
Identities = 299/340 (87%), Positives = 320/340 (94%)
Query: 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIA 60
MA EGILLGMGNPLLDIS+VVDDDFL KYDIKLNNAILAE+KHLP+YDEMASK NVEYIA
Sbjct: 1 MACEGILLGMGNPLLDISAVVDDDFLQKYDIKLNNAILAEDKHLPMYDEMASKDNVEYIA 60
Query: 61 GGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTC 120
GGATQNSIRVAQWMLQIPG TSY+G IGKDKFGEEMKKNS AGVNVHYYEDE+A TGTC
Sbjct: 61 GGATQNSIRVAQWMLQIPGVTSYMGSIGKDKFGEEMKKNSTEAGVNVHYYEDEAAPTGTC 120
Query: 121 AVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAE 180
AVCVVGGERSL+ANLSAANCYKSEHLK+PENW LVEKAKYFYIAGFFLTVSP+SI LVAE
Sbjct: 121 AVCVVGGERSLIANLSAANCYKSEHLKRPENWKLVEKAKYFYIAGFFLTVSPESIMLVAE 180
Query: 181 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 240
HAAANNKVFMMNLSAPFICEFFKD EK LPYMDY+FGNETEARTF+KV GWET++VEEI
Sbjct: 181 HAAANNKVFMMNLSAPFICEFFKDVQEKALPYMDYVFGNETEARTFAKVHGWETENVEEI 240
Query: 241 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 300
ALK+SQWPKAS KR AVITQGADPVVVA+DGK+K FPVI+LPK+KLVDTNGAGDAFVG
Sbjct: 241 ALKISQWPKASGAHKRIAVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVG 300
Query: 301 GFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEF 340
GFLSQLVQEKPIE+CVRAGCY ++VIIQRSGCTYPEKP+F
Sbjct: 301 GFLSQLVQEKPIEDCVRAGCYAANVIIQRSGCTYPEKPDF 340
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296086003|emb|CBI31444.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 630 bits (1624), Expect = e-178, Method: Compositional matrix adjust.
Identities = 296/332 (89%), Positives = 316/332 (95%)
Query: 10 MGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIR 69
MGNPLLDISSVVD++FL KYDIKLNNAILAE+KHLP+YDEMASKYNVEYIAGGATQNSIR
Sbjct: 1 MGNPLLDISSVVDEEFLQKYDIKLNNAILAEDKHLPMYDEMASKYNVEYIAGGATQNSIR 60
Query: 70 VAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGER 129
V QWMLQIPGATSY+GCIGKDKFGEEMKKNSKLAGVNVHY EDE+A TGTCAVCVVGGER
Sbjct: 61 VCQWMLQIPGATSYMGCIGKDKFGEEMKKNSKLAGVNVHYREDETAPTGTCAVCVVGGER 120
Query: 130 SLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVF 189
SL+ANLSAANCYKSEHLK+PENWALVEKAKYFYIAGFFLTVSP+SI LVAEHAAANNKVF
Sbjct: 121 SLIANLSAANCYKSEHLKRPENWALVEKAKYFYIAGFFLTVSPESILLVAEHAAANNKVF 180
Query: 190 MMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPK 249
MMNLSAPFICEFFKD EK LPYMDY+FGNETEARTF+KV GWETD+VEEIA+K+SQWPK
Sbjct: 181 MMNLSAPFICEFFKDQQEKALPYMDYVFGNETEARTFAKVHGWETDNVEEIAIKISQWPK 240
Query: 250 ASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE 309
AS KR VITQGADPVVVA+DGK+K FPVI+LPK+KLVDTNGAGDAFVGGFLSQLVQE
Sbjct: 241 ASGTHKRITVITQGADPVVVAEDGKVKSFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE 300
Query: 310 KPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
KPIEECVRAGCY SHVIIQRSGCTYPEKP+F+
Sbjct: 301 KPIEECVRAGCYASHVIIQRSGCTYPEKPDFS 332
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296086001|emb|CBI31442.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 630 bits (1624), Expect = e-178, Method: Compositional matrix adjust.
Identities = 295/332 (88%), Positives = 316/332 (95%)
Query: 10 MGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIR 69
MGNPLLDISSVVD++FL +YDIKLNNAILAE+KHLP+YDEMASKYNVEYIAGGATQNSIR
Sbjct: 1 MGNPLLDISSVVDEEFLQRYDIKLNNAILAEDKHLPMYDEMASKYNVEYIAGGATQNSIR 60
Query: 70 VAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGER 129
V QWMLQIPGATSY+GCIGKDKFGEEMKKNSKLAGVNVHY EDE+A TGTCAVCVVGGER
Sbjct: 61 VCQWMLQIPGATSYMGCIGKDKFGEEMKKNSKLAGVNVHYREDETAPTGTCAVCVVGGER 120
Query: 130 SLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVF 189
SL+ANLSAANCYKSEHLK+PENWALVEKAKYFYIAGFFLTVSP+SI LVAEHAAANNKVF
Sbjct: 121 SLIANLSAANCYKSEHLKRPENWALVEKAKYFYIAGFFLTVSPESILLVAEHAAANNKVF 180
Query: 190 MMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPK 249
MMNLSAPFICEFFKD EK LPYMDY+FGNETEARTFS+V GWETD+VEEIA+K+SQWPK
Sbjct: 181 MMNLSAPFICEFFKDQQEKALPYMDYVFGNETEARTFSRVHGWETDNVEEIAIKISQWPK 240
Query: 250 ASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE 309
AS KR VITQGADPVVVA+DGK+K FPVI+LPK+KLVDTNGAGDAFVGGFLSQLVQE
Sbjct: 241 ASGTHKRITVITQGADPVVVAEDGKVKSFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQE 300
Query: 310 KPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
KPIEECVRAGCY SHVIIQRSGCTYPEKP+F+
Sbjct: 301 KPIEECVRAGCYASHVIIQRSGCTYPEKPDFS 332
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118484212|gb|ABK93986.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 630 bits (1624), Expect = e-178, Method: Compositional matrix adjust.
Identities = 298/340 (87%), Positives = 321/340 (94%)
Query: 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIA 60
MA EGILLGMGNPLLDIS+VVDDDFL KYDIKLNNAILAE+KHLP+YDEMASK NVEYIA
Sbjct: 1 MACEGILLGMGNPLLDISAVVDDDFLQKYDIKLNNAILAEDKHLPMYDEMASKDNVEYIA 60
Query: 61 GGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTC 120
GGATQNSIRVAQWMLQIPGATSY+G IGKDKFGEEMKKNS AGVNVHYYEDE+A TGTC
Sbjct: 61 GGATQNSIRVAQWMLQIPGATSYMGSIGKDKFGEEMKKNSTEAGVNVHYYEDEAAPTGTC 120
Query: 121 AVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAE 180
AVCVVGGERSL+ANLSAANCYKSEHLK+PENW LVEKAKYFYIAGFFLTVSP+SI LVAE
Sbjct: 121 AVCVVGGERSLIANLSAANCYKSEHLKRPENWKLVEKAKYFYIAGFFLTVSPESIMLVAE 180
Query: 181 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 240
HAAANNKVFMMNLSAPFICEFFKD EK LPYMDY+FGNETEARTF+KV GWET++VEEI
Sbjct: 181 HAAANNKVFMMNLSAPFICEFFKDVQEKALPYMDYVFGNETEARTFAKVHGWETENVEEI 240
Query: 241 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 300
ALK+SQWPKAS KR AVITQGADPVVVA+DGK+K FPVI+LPK+KLVDTNGAGDAFVG
Sbjct: 241 ALKISQWPKASGAHKRIAVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVG 300
Query: 301 GFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEF 340
GFLSQ+VQEKPIE+CV+AGCY ++VIIQRSGCTYPEKP+F
Sbjct: 301 GFLSQMVQEKPIEDCVKAGCYAANVIIQRSGCTYPEKPDF 340
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255581753|ref|XP_002531678.1| adenosine kinase, putative [Ricinus communis] gi|223528683|gb|EEF30697.1| adenosine kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 629 bits (1622), Expect = e-178, Method: Compositional matrix adjust.
Identities = 296/338 (87%), Positives = 321/338 (94%)
Query: 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGA 63
EGILLGMGNPLLDIS+VVD+DFLNKY+IKLNNAILAE+KHLP+Y+EMA+ NVEYIAGGA
Sbjct: 5 EGILLGMGNPLLDISAVVDEDFLNKYEIKLNNAILAEDKHLPMYEEMANNSNVEYIAGGA 64
Query: 64 TQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVC 123
TQNSI+VAQWMLQIPGATSY+GCIGKDKFGEEM KNSK AGVNVHYYEDE+A TGTC VC
Sbjct: 65 TQNSIKVAQWMLQIPGATSYMGCIGKDKFGEEMTKNSKKAGVNVHYYEDETAPTGTCGVC 124
Query: 124 VVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAA 183
VVGGERSLVANLSAANCYKSEHLK+PENWALVEKAKYFYIAGFFLTVSP+SIQLVAEHAA
Sbjct: 125 VVGGERSLVANLSAANCYKSEHLKRPENWALVEKAKYFYIAGFFLTVSPESIQLVAEHAA 184
Query: 184 ANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALK 243
ANNK+F MNLSAPFICEFFKDA EKVLPYMDY+FGNETEARTF+KV GWETD+VEEIA K
Sbjct: 185 ANNKIFTMNLSAPFICEFFKDAQEKVLPYMDYVFGNETEARTFAKVHGWETDNVEEIAKK 244
Query: 244 LSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 303
+SQWPKAS KR VITQGADPVVVA+DGK+K FPVI+LPK+KLVDTNGAGDAFVGGFL
Sbjct: 245 ISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFL 304
Query: 304 SQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
SQLVQEKPIEECVRAGCY ++VIIQRSGCTYPEKP+F+
Sbjct: 305 SQLVQEKPIEECVRAGCYAANVIIQRSGCTYPEKPDFS 342
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224100781|ref|XP_002312012.1| predicted protein [Populus trichocarpa] gi|118482012|gb|ABK92937.1| unknown [Populus trichocarpa] gi|222851832|gb|EEE89379.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 629 bits (1622), Expect = e-178, Method: Compositional matrix adjust.
Identities = 294/341 (86%), Positives = 321/341 (94%)
Query: 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIA 60
MA EGILLGMGNPLLDIS+VVDDDFL KYDIKLNNAILAE+KH+P+YDEMASKY VE+IA
Sbjct: 1 MASEGILLGMGNPLLDISAVVDDDFLQKYDIKLNNAILAEDKHIPMYDEMASKYTVEFIA 60
Query: 61 GGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTC 120
GGATQNSI+VAQWMLQIPGATSY+GCIGKDKFGEEMKKNS AGVNVHYYEDE+A TGTC
Sbjct: 61 GGATQNSIKVAQWMLQIPGATSYMGCIGKDKFGEEMKKNSMKAGVNVHYYEDEAAPTGTC 120
Query: 121 AVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAE 180
AVCVVGGERSL+ANLSAANCYKSEHLK+PENWALVEKAKYFYIAGFFLTVSP+SI LVAE
Sbjct: 121 AVCVVGGERSLIANLSAANCYKSEHLKRPENWALVEKAKYFYIAGFFLTVSPESIMLVAE 180
Query: 181 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 240
HAAANNK+F MNLSAPFICEFFKD E LPYMDY+FGNETEARTF+KV GWET++VEEI
Sbjct: 181 HAAANNKIFTMNLSAPFICEFFKDVQENALPYMDYVFGNETEARTFAKVHGWETENVEEI 240
Query: 241 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 300
ALK+SQWPKAS KR VITQGADPVVVA+DGK+K FPVI+LPK+KLVDTNGAGDAFVG
Sbjct: 241 ALKISQWPKASGAHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVG 300
Query: 301 GFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
GFLSQLVQEKPIE+CV+AGCY ++VIIQRSGCTYPEKP+F+
Sbjct: 301 GFLSQLVQEKPIEDCVKAGCYAANVIIQRSGCTYPEKPDFS 341
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357440379|ref|XP_003590467.1| Adenosine kinase [Medicago truncatula] gi|355479515|gb|AES60718.1| Adenosine kinase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 294/341 (86%), Positives = 320/341 (93%)
Query: 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIA 60
MA EG+LLGMGNPLLDIS+VVD+DFL K+DI+LNNAILAE+KH +YDEMA+KYNVEYIA
Sbjct: 1 MALEGVLLGMGNPLLDISAVVDEDFLKKFDIQLNNAILAEDKHKSMYDEMAAKYNVEYIA 60
Query: 61 GGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTC 120
GGATQNSIRVAQWMLQ+PGATSYIGCIGKDKFGEEM KNSK AGVNVHYYEDE+ TGTC
Sbjct: 61 GGATQNSIRVAQWMLQVPGATSYIGCIGKDKFGEEMTKNSKQAGVNVHYYEDENTPTGTC 120
Query: 121 AVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAE 180
AVCVVGGERSL+ANLSAANCYK +HLK+PENWALVEKAKYFYIAGFFLTVSP+SIQLVAE
Sbjct: 121 AVCVVGGERSLIANLSAANCYKVDHLKQPENWALVEKAKYFYIAGFFLTVSPESIQLVAE 180
Query: 181 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 240
HAAANNKVFMMNLSAPFICEFFKD EK LPYMDY+FGNETEARTFSKV GWET++VEEI
Sbjct: 181 HAAANNKVFMMNLSAPFICEFFKDPQEKALPYMDYVFGNETEARTFSKVHGWETENVEEI 240
Query: 241 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 300
ALK+SQ PKASE RKR VITQGADPV VAQDGK+ +PVI+LPK+KLVDTNGAGDAFVG
Sbjct: 241 ALKISQLPKASEARKRITVITQGADPVCVAQDGKVTLYPVILLPKEKLVDTNGAGDAFVG 300
Query: 301 GFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
GFLSQLVQEKPIEECVRAGCY ++VIIQRSGCTYPEKP+F+
Sbjct: 301 GFLSQLVQEKPIEECVRAGCYAANVIIQRSGCTYPEKPDFH 341
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|211906446|gb|ACJ11716.1| adenosine kinase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust.
Identities = 298/340 (87%), Positives = 316/340 (92%)
Query: 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIA 60
MA EGILLGMGNPLLDIS VVD++FL KYDIKLNNAILAEEKHLP+Y EMASK NVEYIA
Sbjct: 1 MAYEGILLGMGNPLLDISLVVDEEFLKKYDIKLNNAILAEEKHLPMYQEMASKPNVEYIA 60
Query: 61 GGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTC 120
GGATQNSI+VAQWMLQIPGAT YIGCIGKDKFGEEMKKNSK AGVNV Y EDE+A TGTC
Sbjct: 61 GGATQNSIKVAQWMLQIPGATGYIGCIGKDKFGEEMKKNSKAAGVNVQYLEDETAPTGTC 120
Query: 121 AVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAE 180
AVCVVGGERSL+ANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP+SIQLVAE
Sbjct: 121 AVCVVGGERSLIANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPESIQLVAE 180
Query: 181 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 240
HAAA NKVF MNLSAPFICEFFKDA EK LPYMD++FGNETEARTF KV GWETDDV EI
Sbjct: 181 HAAAKNKVFSMNLSAPFICEFFKDAQEKALPYMDFVFGNETEARTFPKVHGWETDDVAEI 240
Query: 241 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 300
ALK+SQWPKAS KRT VITQGADPV+VA+DGK+K+FPVI+LPK+KLVDTNGAGDAFVG
Sbjct: 241 ALKISQWPKASGTYKRTTVITQGADPVIVAEDGKVKQFPVILLPKEKLVDTNGAGDAFVG 300
Query: 301 GFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEF 340
GFLSQLVQ K IE+CVRAGCY S+VIIQRSGCTYPEKPEF
Sbjct: 301 GFLSQLVQGKSIEDCVRAGCYASNVIIQRSGCTYPEKPEF 340
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 341 | ||||||
| TAIR|locus:2142609 | 345 | ADK2 "adenosine kinase 2" [Ara | 0.991 | 0.979 | 0.831 | 2.4e-156 | |
| TAIR|locus:2085079 | 344 | ADK1 "adenosine kinase 1" [Ara | 0.991 | 0.982 | 0.825 | 5.1e-154 | |
| MGI|MGI:87930 | 361 | Adk "adenosine kinase" [Mus mu | 0.991 | 0.936 | 0.594 | 1.1e-110 | |
| ZFIN|ZDB-GENE-030425-3 | 359 | adka "adenosine kinase a" [Dan | 0.991 | 0.941 | 0.594 | 1.4e-110 | |
| UNIPROTKB|F1S2G5 | 362 | ADK "Uncharacterized protein" | 0.991 | 0.933 | 0.591 | 2.9e-110 | |
| UNIPROTKB|Q5ZMK9 | 359 | ADK "Uncharacterized protein" | 0.991 | 0.941 | 0.588 | 3.8e-110 | |
| RGD|2046 | 361 | Adk "adenosine kinase" [Rattus | 0.991 | 0.936 | 0.597 | 4.8e-110 | |
| UNIPROTKB|F1PJV5 | 362 | ADK "Uncharacterized protein" | 0.991 | 0.933 | 0.585 | 6.1e-110 | |
| ZFIN|ZDB-GENE-030131-948 | 345 | adkb "adenosine kinase b" [Dan | 0.982 | 0.971 | 0.605 | 1.3e-109 | |
| UNIPROTKB|F1N468 | 345 | ADK "Uncharacterized protein" | 0.991 | 0.979 | 0.582 | 9e-109 |
| TAIR|locus:2142609 ADK2 "adenosine kinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1524 (541.5 bits), Expect = 2.4e-156, P = 2.4e-156
Identities = 281/338 (83%), Positives = 317/338 (93%)
Query: 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGA 63
+GILLGMGNPLLDIS+VVDD+FL KYDIKLNNAILAE+KHLP+YDEM+SK+NVEYIAGGA
Sbjct: 8 DGILLGMGNPLLDISAVVDDEFLTKYDIKLNNAILAEDKHLPMYDEMSSKFNVEYIAGGA 67
Query: 64 TQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVC 123
TQNSI+VAQWMLQIPGATSY+G IGKDK+GE MKK++ AGVNVHYYEDESA TGTC VC
Sbjct: 68 TQNSIKVAQWMLQIPGATSYMGSIGKDKYGEAMKKDATAAGVNVHYYEDESAPTGTCGVC 127
Query: 124 VVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAA 183
VVGGERSL+ANLSAANCYK +HLKKPENWALVEKAK++YIAGFFLTVSP+SIQLV+EHAA
Sbjct: 128 VVGGERSLIANLSAANCYKVDHLKKPENWALVEKAKFYYIAGFFLTVSPESIQLVSEHAA 187
Query: 184 ANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALK 243
ANNKVF MNLSAPFICEFFKD EK LPYMD++FGNETEARTFS+V GWET+DVE+IA+K
Sbjct: 188 ANNKVFTMNLSAPFICEFFKDVQEKFLPYMDFVFGNETEARTFSRVHGWETEDVEQIAIK 247
Query: 244 LSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 303
+SQ PKA+ KRT VITQGADPVVVA+DGK+KK+PVI LPK+KLVDTNGAGDAFVGGF+
Sbjct: 248 ISQLPKATGTYKRTTVITQGADPVVVAEDGKVKKYPVIPLPKEKLVDTNGAGDAFVGGFM 307
Query: 304 SQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
SQLV+EK IEECV+AGCY S+V+IQRSGCTYPEKP+FN
Sbjct: 308 SQLVKEKSIEECVKAGCYASNVVIQRSGCTYPEKPDFN 345
|
|
| TAIR|locus:2085079 ADK1 "adenosine kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1502 (533.8 bits), Expect = 5.1e-154, P = 5.1e-154
Identities = 279/338 (82%), Positives = 310/338 (91%)
Query: 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGA 63
+GILLGMGNPLLD+S+VVD FL+KYDIKLNNAILAE+KHLP+YDEM+ K+NVEYIAGGA
Sbjct: 7 DGILLGMGNPLLDVSAVVDQQFLDKYDIKLNNAILAEDKHLPMYDEMSQKFNVEYIAGGA 66
Query: 64 TQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVC 123
TQNSI+VAQWMLQ+PGATSY+G IGKDK+GE MKK++ AGV VHYYEDE+ TGTC VC
Sbjct: 67 TQNSIKVAQWMLQVPGATSYMGSIGKDKYGEAMKKDATAAGVYVHYYEDEATPTGTCGVC 126
Query: 124 VVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAA 183
V+GGERSL+ANLSAANCYK EHLKKPENWALVEKAK++YIAGFFLTVSP+SIQLV EHAA
Sbjct: 127 VLGGERSLIANLSAANCYKVEHLKKPENWALVEKAKFYYIAGFFLTVSPESIQLVREHAA 186
Query: 184 ANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALK 243
ANNKVF MNLSAPFICEFFKD EK LPYMDYIFGNETEARTFS+V GWETDDVE+IA+K
Sbjct: 187 ANNKVFTMNLSAPFICEFFKDVQEKCLPYMDYIFGNETEARTFSRVHGWETDDVEQIAIK 246
Query: 244 LSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 303
+SQ PKAS KRT VITQGADPVVVA+DGK+KK+PVI LPK+KLVDTNGAGDAFVGGFL
Sbjct: 247 MSQLPKASGTYKRTTVITQGADPVVVAEDGKVKKYPVIPLPKEKLVDTNGAGDAFVGGFL 306
Query: 304 SQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
SQLV K IEECVRAGCY S+V+IQRSGCTYPEKP+FN
Sbjct: 307 SQLVHGKGIEECVRAGCYASNVVIQRSGCTYPEKPDFN 344
|
|
| MGI|MGI:87930 Adk "adenosine kinase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1093 (389.8 bits), Expect = 1.1e-110, P = 1.1e-110
Identities = 202/340 (59%), Positives = 262/340 (77%)
Query: 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGA 63
E +L GMGNPLLDIS+VVD DFL+KY +K N+ ILAE+KH L+DE+ K+ VEY AGG+
Sbjct: 22 ENVLFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGS 81
Query: 64 TQNSIRVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAV 122
TQNS++VAQW++Q P A ++ GCIG DKFGE +K+ + A V+ HYYE TGTCA
Sbjct: 82 TQNSMKVAQWLIQEPHKAATFFGCIGIDKFGEILKRKAADAHVDAHYYEQNEQPTGTCAA 141
Query: 123 CVVGGERSLVANLSAANCYKSE-HLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEH 181
C+ GG RSLVANL+AANCYK E HL NW LVEKA+ +YIAGFFLTVSP+S+ VA +
Sbjct: 142 CITGGNRSLVANLAAANCYKKEKHLDLERNWVLVEKARVYYIAGFFLTVSPESVLKVARY 201
Query: 182 AAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIA 241
AA NN+VF +NLSAPFI +FFK+AL V+PY+D +FGNETEA TF++ QG+ET D++EIA
Sbjct: 202 AAENNRVFTLNLSAPFISQFFKEALMDVMPYVDILFGNETEAATFAREQGFETKDIKEIA 261
Query: 242 LKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 301
K PK + R+RT + TQG D +VA + + FPV+ +++++DTNGAGDAFVGG
Sbjct: 262 KKAQALPKVNSKRQRTVIFTQGRDDTIVAAENDVTAFPVLDQNQEEIIDTNGAGDAFVGG 321
Query: 302 FLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
FLSQLV +KP+ EC+RAG Y + VII+R+GCT+PEKP+F+
Sbjct: 322 FLSQLVSDKPLTECIRAGHYAASVIIRRTGCTFPEKPDFH 361
|
|
| ZFIN|ZDB-GENE-030425-3 adka "adenosine kinase a" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1092 (389.5 bits), Expect = 1.4e-110, P = 1.4e-110
Identities = 202/340 (59%), Positives = 265/340 (77%)
Query: 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGA 63
+ L GMGNPLLDI +VVD DFL+KY +K N+ ILAE+KH +++EM K+ VEY AGGA
Sbjct: 20 QNALFGMGNPLLDICAVVDKDFLDKYGLKPNDQILAEDKHKEMFEEMVKKFKVEYRAGGA 79
Query: 64 TQNSIRVAQWMLQIP-GATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAV 122
TQNS++VAQWM+Q P ++ GCIGKDKFG+ +K+ ++ A V+ HYYE TG+CA
Sbjct: 80 TQNSVKVAQWMIQEPHNVGTFFGCIGKDKFGKILKEKAEEAHVDAHYYEQSEEPTGSCAA 139
Query: 123 CVVGGERSLVANLSAANCYKSE-HLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEH 181
C+ G RSLVANL+AANCYK E HL ENW LVEKA+ +YIAGFFLTVS +SI VA+H
Sbjct: 140 CITGDNRSLVANLAAANCYKKEKHLDLEENWKLVEKAQVYYIAGFFLTVSLESILKVAKH 199
Query: 182 AAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIA 241
A+ NNK+F +NLSAPFICEFFK+AL KV+PY+D +FGNETEA F++ QG+ET+D+EEIA
Sbjct: 200 ASENNKIFCLNLSAPFICEFFKEALMKVMPYVDILFGNETEAAAFAREQGFETEDIEEIA 259
Query: 242 LKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 301
K PK ++ R+R V TQG + V+A+ K++ FPV+ + + ++VDTNGAGDAFVGG
Sbjct: 260 KKAQSLPKENKKRQRIVVFTQGKEGTVMAKGDKVETFPVLEIDQSEIVDTNGAGDAFVGG 319
Query: 302 FLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
FLSQLVQ+K E+C+RAG Y ++VII+ +GCT+PEKP+F+
Sbjct: 320 FLSQLVQDKTFEQCIRAGHYAANVIIRHAGCTFPEKPDFH 359
|
|
| UNIPROTKB|F1S2G5 ADK "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1089 (388.4 bits), Expect = 2.9e-110, P = 2.9e-110
Identities = 201/340 (59%), Positives = 263/340 (77%)
Query: 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGA 63
E IL GMGNPLLDIS+VVD DFL+KY +K N+ ILAE+KH L+DE+ K+ VEY AGG+
Sbjct: 23 ENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGS 82
Query: 64 TQNSIRVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAV 122
TQNSI+VAQWM+Q P A ++ GCIG DKFGE +KK + A V+ HYYE TGTCA
Sbjct: 83 TQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKKKAAEAHVDAHYYEQNEQPTGTCAA 142
Query: 123 CVVGGERSLVANLSAANCYKSE-HLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEH 181
C+ GG RSLVANL+AANCYK E HL +NW LV+KA+ +YIAGFFLTVSP+S+ VA H
Sbjct: 143 CITGGNRSLVANLAAANCYKKEKHLDMEKNWTLVDKARVYYIAGFFLTVSPESVLKVAHH 202
Query: 182 AAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIA 241
A+ NN++F +NLSAPFI +F+K++L KV+PY+D +FGNETEA TF++ QG+ET+D++EIA
Sbjct: 203 ASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETEDIKEIA 262
Query: 242 LKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 301
K PK + R+R + TQG D ++A + ++ F V+ + ++VDTNGAGDAFVGG
Sbjct: 263 KKTQALPKVNSKRQRIVIFTQGRDDTILATESEVTAFAVLDQDQKEIVDTNGAGDAFVGG 322
Query: 302 FLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
FLSQLV +KP+ EC+RAG Y + VII+R+GCT+PEKP+F+
Sbjct: 323 FLSQLVFDKPLTECIRAGHYAASVIIRRTGCTFPEKPDFH 362
|
|
| UNIPROTKB|Q5ZMK9 ADK "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1088 (388.1 bits), Expect = 3.8e-110, P = 3.8e-110
Identities = 200/340 (58%), Positives = 263/340 (77%)
Query: 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGA 63
E +L GMGNPLLDI +VVD DFL+KY +K N+ ILAEEKH L++E+ K+ VEY AGG+
Sbjct: 20 ENVLFGMGNPLLDICAVVDKDFLDKYGLKPNDQILAEEKHKELFEELVKKFKVEYHAGGS 79
Query: 64 TQNSIRVAQWMLQIP-GATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAV 122
TQNS++VAQWM+Q P A ++ GCIGKDKFGE +KK ++ A V+ HYYE TGTCA
Sbjct: 80 TQNSVKVAQWMIQNPYKAATFFGCIGKDKFGEILKKKAEEAHVDAHYYEQSEEPTGTCAA 139
Query: 123 CVVGGERSLVANLSAANCYKSE-HLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEH 181
C+ RSLVANL+AANCYK E HL +NW LVEKAK +YIAGFFLTVSP+++ VA
Sbjct: 140 CITSDNRSLVANLAAANCYKKEKHLDLEKNWKLVEKAKVYYIAGFFLTVSPEAVLKVATQ 199
Query: 182 AAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIA 241
A+ANNK+F +NLSAPFI +F+K+ + KV+PY+D +FGNETEA TF++ QG+ET+D++EIA
Sbjct: 200 ASANNKIFSLNLSAPFISQFYKEPMMKVMPYVDVLFGNETEAATFAREQGFETEDIKEIA 259
Query: 242 LKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 301
K PK + R+R + TQG + V+A + ++ FPV+V + ++VDTNGAGDAFVGG
Sbjct: 260 RKTQALPKVNTKRQRIVIFTQGKEDTVMATENEVTTFPVLVSDQSEIVDTNGAGDAFVGG 319
Query: 302 FLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
FLSQLV ++P+ EC+RAG Y + VII+RSGCT+PEKP+F+
Sbjct: 320 FLSQLVYDRPVTECIRAGHYAASVIIKRSGCTFPEKPDFH 359
|
|
| RGD|2046 Adk "adenosine kinase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1087 (387.7 bits), Expect = 4.8e-110, P = 4.8e-110
Identities = 203/340 (59%), Positives = 259/340 (76%)
Query: 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGA 63
E +L GMGNPLLDIS+VVD DFL+KY +K N+ ILAE+KH L+DE+ K+ VEY AGG+
Sbjct: 22 ENVLFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGS 81
Query: 64 TQNSIRVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAV 122
TQNS++VAQWM+Q P A ++ GCIG DKFGE +K + A V+ HYYE TGTCA
Sbjct: 82 TQNSMKVAQWMIQEPHRAATFFGCIGIDKFGEILKSKAADAHVDAHYYEQNEQPTGTCAA 141
Query: 123 CVVGGERSLVANLSAANCYKSE-HLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEH 181
C+ GG RSLVANL+AANCYK E HL NW LVEKA+ +YIAGFFLTVSP+S+ VA +
Sbjct: 142 CITGGNRSLVANLAAANCYKKEKHLDLENNWMLVEKARVYYIAGFFLTVSPESVLKVARY 201
Query: 182 AAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIA 241
AA NN+ F +NLSAPFI +FFK+AL +V+PY+D +FGNETEA TF++ QG+ET D++EIA
Sbjct: 202 AAENNRTFTLNLSAPFISQFFKEALMEVMPYVDILFGNETEAATFAREQGFETKDIKEIA 261
Query: 242 LKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 301
K PK + R+RT + TQG D +VA + FPV+ ++++VDTNGAGDAFVGG
Sbjct: 262 RKTQALPKVNSKRQRTVIFTQGRDDTIVATGNDVTAFPVLDQNQEEIVDTNGAGDAFVGG 321
Query: 302 FLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
FLSQLV KP+ EC+RAG Y + VII+R+GCT+PEKP+F+
Sbjct: 322 FLSQLVSNKPLTECIRAGHYAASVIIRRTGCTFPEKPDFH 361
|
|
| UNIPROTKB|F1PJV5 ADK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1086 (387.4 bits), Expect = 6.1e-110, P = 6.1e-110
Identities = 199/340 (58%), Positives = 264/340 (77%)
Query: 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGA 63
E IL GMGNPLLDI++VVD DFL+KY +K N+ ILAE+KH L+DE+ K+ VEY AGG+
Sbjct: 23 ENILFGMGNPLLDITAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGS 82
Query: 64 TQNSIRVAQWMLQIP-GATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAV 122
TQNSI+VAQWM+Q P A ++ GCIG D FGE +KK + A V+ HYYE +TGTCAV
Sbjct: 83 TQNSIKVAQWMIQQPYKAATFFGCIGTDTFGEILKKKAAEAHVDAHYYEQNEQTTGTCAV 142
Query: 123 CVVGGERSLVANLSAANCYKSE-HLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEH 181
C+ G RSLVANL+AANCYK E HL +NW LVEKA+ +YIAGFFLTVSP+S+ VA H
Sbjct: 143 CITGSNRSLVANLAAANCYKKEKHLDMDKNWTLVEKARVYYIAGFFLTVSPESVLKVANH 202
Query: 182 AAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIA 241
A+ NN++F +NLSAPFI +F+K++L KV+PY+D +FGNETEA TF++ QG+ET+D++EIA
Sbjct: 203 ASENNRIFTLNLSAPFISQFYKESLMKVMPYIDILFGNETEAATFAREQGFETEDIKEIA 262
Query: 242 LKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 301
K PK ++ R+R + TQG + ++A + ++ F V+ + ++VDTNGAGDAFVGG
Sbjct: 263 RKTQALPKVNQKRQRIVIFTQGREDTIMATESEVTAFAVLDQDQKEIVDTNGAGDAFVGG 322
Query: 302 FLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
FLSQLV +KP+ EC+RAG Y + VII+R+GCT+PEKP+F+
Sbjct: 323 FLSQLVSDKPLTECIRAGHYAASVIIRRTGCTFPEKPDFH 362
|
|
| ZFIN|ZDB-GENE-030131-948 adkb "adenosine kinase b" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1083 (386.3 bits), Expect = 1.3e-109, P = 1.3e-109
Identities = 204/337 (60%), Positives = 260/337 (77%)
Query: 7 LLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQN 66
L GMGNPLLDIS+VVD DFL+KY +K N+ ILAEEKH L+DE+ +K VEY AGG+TQN
Sbjct: 9 LFGMGNPLLDISAVVDKDFLDKYGLKPNDQILAEEKHKALFDEIVNKSKVEYHAGGSTQN 68
Query: 67 SIRVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV 125
S+++AQWM+Q P ++ GCIG D FGE +K+ + A V+ HYYE TGTCA C+
Sbjct: 69 SVKIAQWMIQEPHKVATFFGCIGTDHFGEILKQKAAEAHVDAHYYEQNQEPTGTCAACIT 128
Query: 126 GGERSLVANLSAANCY-KSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAA 184
G RSLVANL+AANCY K +HL NW+LVEKA+ +YIAGFFLTVSPDSI VA+HA+
Sbjct: 129 GDNRSLVANLAAANCYNKEKHLDIDRNWSLVEKARVYYIAGFFLTVSPDSILKVAKHASD 188
Query: 185 NNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKL 244
NNK+F +NLSAPFI +F K+ L KVLPY+D IFGNETEA TF+K QG+ET+D+ EIA ++
Sbjct: 189 NNKIFGLNLSAPFISQFSKEPLMKVLPYVDIIFGNETEAATFAKEQGFETEDIAEIAHRV 248
Query: 245 SQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLS 304
PK ++ R+R V TQG + V K+K FPV+ + ++ +VDTNGAGDAFVGGFLS
Sbjct: 249 QNLPKVNKNRQRIVVFTQGREDTVATVGDKVKMFPVLDIDQNDIVDTNGAGDAFVGGFLS 308
Query: 305 QLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
LVQ++P+EEC+RAG Y +HVII+RSGCT+PEKP+F+
Sbjct: 309 ALVQDQPLEECIRAGHYAAHVIIRRSGCTFPEKPDFH 345
|
|
| UNIPROTKB|F1N468 ADK "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1075 (383.5 bits), Expect = 9.0e-109, P = 9.0e-109
Identities = 198/340 (58%), Positives = 261/340 (76%)
Query: 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGA 63
E IL GMGNPLLDIS+VVD DFL+KY +K N+ ILAEEKH L+DE+ K+ VEY AGG+
Sbjct: 6 ENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEEKHKELFDELVKKFKVEYHAGGS 65
Query: 64 TQNSIRVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAV 122
TQNSI+VAQWM+Q P A ++ GCIG DKFGE +KK + A V+ HYYE TGTCA
Sbjct: 66 TQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKKKAAEAHVDAHYYEQNEQPTGTCAA 125
Query: 123 CVVGGERSLVANLSAANCYKSE-HLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEH 181
C+ GG RSLVANL+AANCYK E HL +NW LV+KA+ +YIAGFFLTVSP+S+ VA H
Sbjct: 126 CITGGNRSLVANLAAANCYKKEKHLDMEKNWMLVDKARVYYIAGFFLTVSPESVLKVAHH 185
Query: 182 AAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIA 241
A+ NN++F +NLSAPFI +F+K++L KV+P++D +FGNE EA F++ QG+ET+D++EIA
Sbjct: 186 ASENNRIFTLNLSAPFISQFYKESLMKVMPFVDILFGNEMEAAAFAREQGFETEDIKEIA 245
Query: 242 LKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 301
K PK + R+R + TQG + ++A + ++ F V+ + ++VDTNGAGDAFVGG
Sbjct: 246 RKTQALPKVNSKRQRIVIFTQGREDTILATESEVTAFAVLDQDQTEIVDTNGAGDAFVGG 305
Query: 302 FLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
FLSQLV +KP+ EC+RAG Y + VII+R+GCT+PEKP+F+
Sbjct: 306 FLSQLVSDKPLTECIRAGHYAASVIIRRTGCTFPEKPDFH 345
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| O49923 | ADK_PHYPA | 2, ., 7, ., 1, ., 2, 0 | 0.6705 | 0.9970 | 0.9912 | N/A | no |
| P55262 | ADK_CRIGR | 2, ., 7, ., 1, ., 2, 0 | 0.5941 | 0.9912 | 0.9362 | yes | no |
| P55263 | ADK_HUMAN | 2, ., 7, ., 1, ., 2, 0 | 0.5777 | 0.9941 | 0.9364 | yes | no |
| P55264 | ADK_MOUSE | 2, ., 7, ., 1, ., 2, 0 | 0.5941 | 0.9912 | 0.9362 | yes | no |
| P47143 | ADK_YEAST | 2, ., 7, ., 1, ., 2, 0 | 0.4129 | 0.9442 | 0.9470 | yes | no |
| Q9LZG0 | ADK2_ARATH | 2, ., 7, ., 1, ., 2, 0 | 0.8313 | 0.9912 | 0.9797 | yes | no |
| Q54MB5 | ADK_DICDI | 2, ., 7, ., 1, ., 2, 0 | 0.4650 | 0.9589 | 0.9617 | yes | no |
| Q64640 | ADK_RAT | 2, ., 7, ., 1, ., 2, 0 | 0.5970 | 0.9912 | 0.9362 | yes | no |
| P78825 | ADK_SCHPO | 2, ., 7, ., 1, ., 2, 0 | 0.4427 | 0.9530 | 0.9558 | yes | no |
| Q9SF85 | ADK1_ARATH | 2, ., 7, ., 1, ., 2, 0 | 0.8254 | 0.9912 | 0.9825 | no | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 341 | |||
| PLN02548 | 332 | PLN02548, PLN02548, adenosine kinase | 0.0 | |
| PTZ00247 | 345 | PTZ00247, PTZ00247, adenosine kinase; Provisional | 1e-169 | |
| cd01168 | 312 | cd01168, adenosine_kinase, Adenosine kinase (AK) c | 1e-139 | |
| pfam00294 | 298 | pfam00294, PfkB, pfkB family carbohydrate kinase | 1e-70 | |
| COG0524 | 311 | COG0524, RbsK, Sugar kinases, ribokinase family [C | 5e-48 | |
| cd01166 | 294 | cd01166, KdgK, 2-keto-3-deoxygluconate kinase (Kdg | 3e-33 | |
| cd01174 | 292 | cd01174, ribokinase, Ribokinase catalyses the phos | 2e-32 | |
| TIGR02152 | 293 | TIGR02152, D_ribokin_bact, ribokinase | 4e-28 | |
| cd01942 | 279 | cd01942, ribokinase_group_A, Ribokinase-like subgr | 4e-23 | |
| cd01167 | 295 | cd01167, bac_FRK, Fructokinases (FRKs) mainly from | 9e-19 | |
| PLN02379 | 367 | PLN02379, PLN02379, pfkB-type carbohydrate kinase | 3e-16 | |
| cd00287 | 196 | cd00287, ribokinase_pfkB_like, ribokinase/pfkB sup | 8e-16 | |
| PRK11142 | 306 | PRK11142, PRK11142, ribokinase; Provisional | 1e-15 | |
| cd01941 | 288 | cd01941, YeiC_kinase_like, YeiC-like sugar kinase | 2e-14 | |
| PTZ00292 | 326 | PTZ00292, PTZ00292, ribokinase; Provisional | 2e-11 | |
| cd01940 | 264 | cd01940, Fructoselysine_kinase_like, Fructoselysin | 3e-11 | |
| cd01944 | 289 | cd01944, YegV_kinase_like, YegV-like sugar kinase | 2e-10 | |
| PLN02813 | 426 | PLN02813, PLN02813, pfkB-type carbohydrate kinase | 4e-09 | |
| PRK09434 | 304 | PRK09434, PRK09434, aminoimidazole riboside kinase | 2e-08 | |
| cd01943 | 328 | cd01943, MAK32, MAK32 kinase | 6e-08 | |
| cd01945 | 284 | cd01945, ribokinase_group_B, Ribokinase-like subgr | 2e-07 | |
| PRK09813 | 260 | PRK09813, PRK09813, fructoselysine 6-kinase; Provi | 2e-07 | |
| TIGR03168 | 303 | TIGR03168, 1-PFK, hexose kinase, 1-phosphofructoki | 3e-07 | |
| cd01947 | 265 | cd01947, Guanosine_kinase_like, Guanosine kinase-l | 5e-07 | |
| cd01164 | 289 | cd01164, FruK_PfkB_like, 1-phosphofructokinase (Fr | 1e-06 | |
| TIGR03828 | 304 | TIGR03828, pfkB, 1-phosphofructokinase | 4e-06 | |
| cd01937 | 254 | cd01937, ribokinase_group_D, Ribokinase-like subgr | 5e-06 | |
| COG1105 | 310 | COG1105, FruK, Fructose-1-phosphate kinase and rel | 1e-05 | |
| PLN02323 | 330 | PLN02323, PLN02323, probable fructokinase | 4e-05 | |
| cd01939 | 290 | cd01939, Ketohexokinase, Ketohexokinase (fructokin | 4e-05 | |
| cd01946 | 277 | cd01946, ribokinase_group_C, Ribokinase-like subgr | 5e-04 | |
| PRK09434 | 304 | PRK09434, PRK09434, aminoimidazole riboside kinase | 6e-04 | |
| PLN02630 | 335 | PLN02630, PLN02630, pfkB-type carbohydrate kinase | 8e-04 |
| >gnl|CDD|178163 PLN02548, PLN02548, adenosine kinase | Back alignment and domain information |
|---|
Score = 701 bits (1812), Expect = 0.0
Identities = 282/332 (84%), Positives = 307/332 (92%)
Query: 10 MGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIR 69
MGNPLLDIS+VVD DFL+KYD+KLNNAILAEEKHLP+YDE+ASKYNVEYIAGGATQNSIR
Sbjct: 1 MGNPLLDISAVVDQDFLDKYDVKLNNAILAEEKHLPMYDELASKYNVEYIAGGATQNSIR 60
Query: 70 VAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGER 129
VAQWMLQIPGATSY+GCIGKDKFGEEMKK + AGVNVHYYEDES TGTCAV VVGGER
Sbjct: 61 VAQWMLQIPGATSYMGCIGKDKFGEEMKKCATAAGVNVHYYEDESTPTGTCAVLVVGGER 120
Query: 130 SLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVF 189
SLVANLSAANCYK EHLKKPENWALVEKAK++YIAGFFLTVSP+SI LVAEHAAANNK F
Sbjct: 121 SLVANLSAANCYKVEHLKKPENWALVEKAKFYYIAGFFLTVSPESIMLVAEHAAANNKTF 180
Query: 190 MMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPK 249
MMNLSAPFICEFFKD L + LPY+D++FGNETEARTF+KVQGWET+DVEEIALK+S PK
Sbjct: 181 MMNLSAPFICEFFKDQLMEALPYVDFLFGNETEARTFAKVQGWETEDVEEIALKISALPK 240
Query: 250 ASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE 309
AS KRT VITQGADP VVA+DGK+K+FPVI LPK+KLVDTNGAGDAFVGGFLSQLVQ
Sbjct: 241 ASGTHKRTVVITQGADPTVVAEDGKVKEFPVIPLPKEKLVDTNGAGDAFVGGFLSQLVQG 300
Query: 310 KPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
K IEECVRAG Y ++VIIQRSGCTYPEKP+F+
Sbjct: 301 KDIEECVRAGNYAANVIIQRSGCTYPEKPDFS 332
|
Length = 332 |
| >gnl|CDD|240328 PTZ00247, PTZ00247, adenosine kinase; Provisional | Back alignment and domain information |
|---|
Score = 474 bits (1223), Expect = e-169
Identities = 174/341 (51%), Positives = 237/341 (69%), Gaps = 1/341 (0%)
Query: 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIA 60
+ LLG GNPLLDIS+ V D+FL KY ++L +AILAEEK LP+++E+ S NV Y+
Sbjct: 2 SSAPKKLLGFGNPLLDISAHVSDEFLEKYGLELGSAILAEEKQLPIFEELESIPNVSYVP 61
Query: 61 GGATQNSIRVAQWMLQIP-GATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGT 119
GG+ N+ RVAQWMLQ P G Y+GC+G D+F E +K+ ++ GV + + A TGT
Sbjct: 62 GGSALNTARVAQWMLQAPKGFVCYVGCVGDDRFAEILKEAAEKDGVEMLFEYTTKAPTGT 121
Query: 120 CAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVA 179
CAV V G ERSLVANL AAN +EH++ ++ A+ +Y+ GFFLTVSP+++ VA
Sbjct: 122 CAVLVCGKERSLVANLGAANHLSAEHMQSHAVQEAIKTAQLYYLEGFFLTVSPNNVLQVA 181
Query: 180 EHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEE 239
+HA + K+F +NLSAPFI +FF + L +VLPY+D +FGNE EA+TF+K W+T+D++E
Sbjct: 182 KHARESGKLFCLNLSAPFISQFFFERLLQVLPYVDILFGNEEEAKTFAKAMKWDTEDLKE 241
Query: 240 IALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFV 299
IA +++ PK S R R V TQG +P ++A + PV L ++K+VDTNGAGDAFV
Sbjct: 242 IAARIAMLPKYSGTRPRLVVFTQGPEPTLIATKDGVTSVPVPPLDQEKIVDTNGAGDAFV 301
Query: 300 GGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEF 340
GGFL+Q K I+ CV AG Y++ VIIQ +GCTYPEKP F
Sbjct: 302 GGFLAQYANGKDIDRCVEAGHYSAQVIIQHNGCTYPEKPPF 342
|
Length = 345 |
| >gnl|CDD|238573 cd01168, adenosine_kinase, Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor | Back alignment and domain information |
|---|
Score = 397 bits (1023), Expect = e-139
Identities = 146/333 (43%), Positives = 202/333 (60%), Gaps = 22/333 (6%)
Query: 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGA 63
+LG+GN L+DI + VDD FL K +K + ILA + +E+ +K V+YIAGG+
Sbjct: 1 RYDVLGLGNALVDILAQVDDAFLEKLGLKKGDMILA---DMEEQEELLAKLPVKYIAGGS 57
Query: 64 TQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVC 123
N+IR A + G+ ++IG +G DK G+ + K+ + AGV+ Y TGTCAV
Sbjct: 58 AANTIRGAAALG---GSAAFIGRVGDDKLGDFLLKDLRAAGVDTRYQVQPDGPTGTCAVL 114
Query: 124 V-VGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHA 182
V ER++ L AAN + L +W+L+ KAKY Y+ G+ LTV P++I L AEHA
Sbjct: 115 VTPDAERTMCTYLGAANELSPDDL----DWSLLAKAKYLYLEGYLLTVPPEAILLAAEHA 170
Query: 183 AANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL 242
N +NLSAPFI + FK+AL ++LPY+D +FGNE EA ++ ET D E AL
Sbjct: 171 KENGVKIALNLSAPFIVQRFKEALLELLPYVDILFGNEEEAEALAEA---ETTDDLEAAL 227
Query: 243 KLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGF 302
KL +R R VITQGA VV + G++ +PV +P +K+VDTNGAGDAF GGF
Sbjct: 228 KLLA------LRCRIVVITQGAKGAVVVEGGEV--YPVPAIPVEKIVDTNGAGDAFAGGF 279
Query: 303 LSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYP 335
L LVQ +P+EEC+R G Y + +IQ+ G P
Sbjct: 280 LYGLVQGEPLEECIRLGSYAAAEVIQQLGPRLP 312
|
The physiological function of AK is associated with the regulation of extracellular adenosine levels and the preservation of intracellular adenylate pools. Adenosine kinase is involved in the purine salvage pathway. . Length = 312 |
| >gnl|CDD|215842 pfam00294, PfkB, pfkB family carbohydrate kinase | Back alignment and domain information |
|---|
Score = 221 bits (565), Expect = 1e-70
Identities = 85/310 (27%), Positives = 129/310 (41%), Gaps = 23/310 (7%)
Query: 28 KYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCI 87
+ I E E+ VE AGGA N + G ++IG +
Sbjct: 6 VIGEANIDLIGRVEGL---EGELNRVKTVEKGAGGAGANVAVALARLG---GEVTFIGKV 59
Query: 88 GKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCV-VGGERSLVANLSAANCYKSEH 145
G D FGE + + K GV+ Y DE TG + V GER++ AA E
Sbjct: 60 GDDNFGEFLLELLKKEGVDTDYVVIDEDTRTGLALILVDGDGERTINFYRGAAADLTPEE 119
Query: 146 LKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDA 205
L L+E A Y++G P++ AA N F NL P +
Sbjct: 120 L----PEDLLENADILYLSGSLPLPLPEATLEELIEAAKNGGTFDPNLRDPLWA--DLEV 173
Query: 206 LEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGAD 265
L ++LP D + NE E + + + ++ K ++ +T V+T GAD
Sbjct: 174 LLELLPLADILKPNEEELEALTGEKINDIEEALAALHKHAK-------GVKTVVVTLGAD 226
Query: 266 PVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHV 325
++ V +PK K+VDT GAGDAFV GFL+ L+ K +EE +R + +
Sbjct: 227 GALLVDGDGE--VHVPPVPKVKVVDTTGAGDAFVAGFLAGLLAGKSLEEALRFANAVAAL 284
Query: 326 IIQRSGCTYP 335
++Q++G
Sbjct: 285 VVQKTGAISS 294
|
This family includes a variety of carbohydrate and pyrimidine kinases. Length = 298 |
| >gnl|CDD|223598 COG0524, RbsK, Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 163 bits (415), Expect = 5e-48
Identities = 85/331 (25%), Positives = 136/331 (41%), Gaps = 38/331 (11%)
Query: 7 LLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQN 66
++ +G +D+ + V D + L + + GG N
Sbjct: 2 VVVIGEANVDLIAQVVDRLPEPGETVLGD-------------------FFKVAGGGKGAN 42
Query: 67 SIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNV-HYYEDESASTGTCAVCVV 125
VA + ++ + IG +G D FGE + + + GV+ H DE A+TG + V
Sbjct: 43 ---VAVALARLGAKVALIGAVGDDDFGEFLLEELRKEGVDTSHVVTDEGATTGLALILVD 99
Query: 126 G-GERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAA 184
GER+ V AA + + + A +I+G L + P+++ E A A
Sbjct: 100 EDGERTFVFYRGAAALLLTPED---LDEDELAGADVLHISGIQLEIPPEALLAALELAKA 156
Query: 185 NNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKL 244
+L+ ++ LE++L D +F NE EA + +D E A L
Sbjct: 157 AGVTVSFDLNPRPALWD-RELLEELLALADILFPNEEEAELLTG----LEEDAEAAAALL 211
Query: 245 SQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLS 304
+T V+T GA+ VV G PV K K+VDT GAGDAF GFL+
Sbjct: 212 LAKGV------KTVVVTLGAEGAVVFTGGGEVTVPVPAAFKVKVVDTTGAGDAFAAGFLA 265
Query: 305 QLVQEKPIEECVRAGCYTSHVIIQRSGCTYP 335
L++ K +EE +R + + + R G
Sbjct: 266 GLLEGKSLEEALRFANAAAALAVTRPGARPS 296
|
Length = 311 |
| >gnl|CDD|238571 cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP) | Back alignment and domain information |
|---|
Score = 124 bits (314), Expect = 3e-33
Identities = 77/285 (27%), Positives = 125/285 (43%), Gaps = 33/285 (11%)
Query: 61 GGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGT 119
GGA N VA + ++ + + +G D FG + + GV+ + D TG
Sbjct: 31 GGAEAN---VAVGLARLGHRVALVTAVGDDPFGRFILAELRREGVDTSHVRVDPGRPTGL 87
Query: 120 CAV-CVVGGERSLV---ANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSI 175
+ GGER ++ A SAA+ E L + A + A + +++G L +S +
Sbjct: 88 YFLEIGAGGERRVLYYRAG-SAASRLTPEDL----DEAALAGADHLHLSGITLALSESAR 142
Query: 176 QLV---AEHAAANNK--VFMMNLSAPFIC-EFFKDALEKVLPYMDYIFGNETEARTFSKV 229
+ + E A A F +N E ++ALE++LPY+D + +E EA
Sbjct: 143 EALLEALEAAKARGVTVSFDLNYRPKLWSAEEAREALEELLPYVDIVLPSEEEAEALL-- 200
Query: 230 QGWETD-DVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKL 288
G E D E AL L + + V+ GA+ +V G P ++
Sbjct: 201 -GDEDPTDAAERALAL-------ALGVKAVVVKLGAEGALVYTGGGRVFVPA---YPVEV 249
Query: 289 VDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCT 333
VDT GAGDAF GFL+ L++ +EE +R + +++ R G
Sbjct: 250 VDTTGAGDAFAAGFLAGLLEGWDLEEALRFANAAAALVVTRPGDI 294
|
KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources. Length = 294 |
| >gnl|CDD|238579 cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 2e-32
Identities = 66/262 (25%), Positives = 109/262 (41%), Gaps = 40/262 (15%)
Query: 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVV--GGERSLV----A 133
+ IG +G D FG+E+ +N + G++V Y A TGT AV V GE +V A
Sbjct: 53 VAMIGAVGDDAFGDELLENLREEGIDVSYVEVVVGAPTGT-AVITVDESGENRIVVVPGA 111
Query: 134 NLSAANCYKSEHLKKPENWALVEKAK-YFYIAGFFLT---VSPDSIQLVAEHAAANNKVF 189
N A V+ A A L + +++ A
Sbjct: 112 NGEL-------------TPADVDAALELIAAADVLLLQLEIPLETVLAALRAARRAGVTV 158
Query: 190 MMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPK 249
++N AP + ++L +D + NETEA + ++ + +D E+ A L
Sbjct: 159 ILN-PAPA-----RPLPAELLALVDILVPNETEAALLTGIEVTDEEDAEKAARLLLAKGV 212
Query: 250 ASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE 309
+ ++T GA ++A G+++ P K K VDT GAGD F+G + L +
Sbjct: 213 ------KNVIVTLGAKGALLASGGEVEHVPAF---KVKAVDTTGAGDTFIGALAAALARG 263
Query: 310 KPIEECVRAGCYTSHVIIQRSG 331
+EE +R + + + R G
Sbjct: 264 LSLEEAIRFANAAAALSVTRPG 285
|
This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution. Length = 292 |
| >gnl|CDD|233751 TIGR02152, D_ribokin_bact, ribokinase | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 4e-28
Identities = 69/267 (25%), Positives = 116/267 (43%), Gaps = 23/267 (8%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVV-GGERSLVANLS 136
S IG +G D FG+E+ +N K G++ Y + TGT + V GE +V
Sbjct: 46 AEVSMIGKVGDDAFGDELLENLKSNGIDTEYVGTVKDTPTGTAFITVDDTGENRIVVVAG 105
Query: 137 AANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAP 196
A E + AL+ ++ + L + +++ A+ A + ++N AP
Sbjct: 106 ANAELTPEDIDA--AEALIAESDIVLLQ---LEIPLETVLEAAKIAKKHGVKVILN-PAP 159
Query: 197 FICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKR 256
I KD +++L +D I NETEA + ++ + +D E+ A KL + +
Sbjct: 160 AI----KDLDDELLSLVDIITPNETEAEILTGIEVTDEEDAEKAAEKLLE------KGVK 209
Query: 257 TAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECV 316
+IT G+ ++ + K P K K VDT AGD F G F L + K +E+ +
Sbjct: 210 NVIITLGSKGALLVSKDESKLIPAF---KVKAVDTTAAGDTFNGAFAVALAEGKSLEDAI 266
Query: 317 RAGCYTSHVIIQRSGC--TYPEKPEFN 341
R + + + R G + P E
Sbjct: 267 RFANAAAAISVTRKGAQSSIPYLEEVE 293
|
This model describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences, few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not [Energy metabolism, Sugars]. Length = 293 |
| >gnl|CDD|238917 cd01942, ribokinase_group_A, Ribokinase-like subgroup A | Back alignment and domain information |
|---|
Score = 96.6 bits (241), Expect = 4e-23
Identities = 56/257 (21%), Positives = 95/257 (36%), Gaps = 42/257 (16%)
Query: 84 IGCIGKDKFGEEMKKNSKLAGVNV-HYYEDESASTGTCAVCVVGGERSLVANLSAANCYK 142
+ +G+D G + + GV+ H + STG + G + + A
Sbjct: 56 VAAVGEDFHGRLYLEELREEGVDTSHVRVVDEDSTGVAFILTDGDDNQIAYFYPGAM--- 112
Query: 143 SEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMM-------NLSA 195
+ ++A +A V S + E A + L
Sbjct: 113 -------DELEPNDEADPDGLADI---VHLSSGPGLIELARELAAGGITVSFDPGQELPR 162
Query: 196 PFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRK 255
+ LE++L D +F N+ EA + G ++
Sbjct: 163 -----LSGEELEEILERADILFVNDYEAELLKERTGLSEAELAS--------------GV 203
Query: 256 RTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEEC 315
R V+T G +V +DG+ + P + P K+VDT GAGDAF GFL L++ +EE
Sbjct: 204 RVVVVTLGPKGAIVFEDGEEVEVPAV--PAVKVVDTTGAGDAFRAGFLYGLLRGYDLEES 261
Query: 316 VRAGCYTSHVIIQRSGC 332
+R G + + ++R G
Sbjct: 262 LRLGNLAASLKVERRGA 278
|
Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. Length = 279 |
| >gnl|CDD|238572 cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate | Back alignment and domain information |
|---|
Score = 84.6 bits (210), Expect = 9e-19
Identities = 70/276 (25%), Positives = 109/276 (39%), Gaps = 35/276 (12%)
Query: 60 AGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTG 118
GGA N L A +IG +G D+FG+ + + K AGV+ D +A T
Sbjct: 27 PGGAPANVAVALA-RLGGKAA--FIGKVGDDEFGDFLLETLKEAGVDTRGIQFDPAAPTT 83
Query: 119 TCAVCVVG-GERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP--DSI 175
V + GERS A L N L+ +A + L P ++
Sbjct: 84 LAFVTLDADGERSFEFYRGPA---ADLLLDTELNPDLLSEADILHFGSIALASEPSRSAL 140
Query: 176 QLVAEHAAANNKV--FMMNLSAPFIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQG 231
+ E A + F NL P E ++ + ++L D + ++ E
Sbjct: 141 LELLEAAKKAGVLISFDPNLRPPLWRDEEEARERIAELLELADIVKLSDEELELLFG--- 197
Query: 232 WETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDT 291
+D EEIA L + ++T+GAD ++ G + + P ++VDT
Sbjct: 198 --EEDPEEIAALL-LLFGLKLV-----LVTRGADGALLYTKGGVGEVPG---IPVEVVDT 246
Query: 292 NGAGDAFVGGFLSQLVQ-------EKPIEECVRAGC 320
GAGDAFV G L+QL+ E + E +R
Sbjct: 247 TGAGDAFVAGLLAQLLSRGLLALDEDELAEALRFAN 282
|
This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate. Length = 295 |
| >gnl|CDD|178005 PLN02379, PLN02379, pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Score = 78.3 bits (193), Expect = 3e-16
Identities = 75/307 (24%), Positives = 134/307 (43%), Gaps = 37/307 (12%)
Query: 35 NAILAE-EKH-LPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKF 92
IL E H LP D+++ ++ +AGG+ N+IR + +T IG G D+
Sbjct: 61 EHILREVNAHILPSPDDLSP---IKTMAGGSVANTIRGLSAGFGV--STGIIGACGDDEQ 115
Query: 93 GEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVG--GERSLVANLSAANCYKSEHLKKPE 150
G+ N +GV++ + T C VC+V G R++ LS+A +++ L K +
Sbjct: 116 GKLFVSNMGFSGVDLSRLRAKKGPTAQC-VCLVDALGNRTMRPCLSSAVKLQADELTKED 174
Query: 151 ----NWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDAL 206
W ++ Y + + I+ A ++L++ + F+ L
Sbjct: 175 FKGSKWLVLRYGFY----------NLEVIEAAIRLAKQEGLSVSLDLASFEMVRNFRSPL 224
Query: 207 EKVLPY--MDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGA 264
++L +D F NE EAR ++G + D E L+++ AV+T G+
Sbjct: 225 LQLLESGKIDLCFANEDEAREL--LRGEQESDPEAALEFLAKYCN-------WAVVTLGS 275
Query: 265 DPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSH 324
+ ++ + P I + VD GAGD F GFL L++ +EEC + G +
Sbjct: 276 KGCIARHGKEVVRVPAIG--ETNAVDATGAGDLFASGFLYGLIKGLSLEECCKVGACSGG 333
Query: 325 VIIQRSG 331
+++ G
Sbjct: 334 SVVRALG 340
|
Length = 367 |
| >gnl|CDD|238177 cd00287, ribokinase_pfkB_like, ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group | Back alignment and domain information |
|---|
Score = 74.4 bits (183), Expect = 8e-16
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 19/145 (13%)
Query: 168 LTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFS 227
L+ +P+++ E A +++ P + LEK+LP +D + NE EA +
Sbjct: 66 LSPAPEAVLDALEEARRRGVPVVLDP-GPRAVRLDGEELEKLLPGVDILTPNEEEAEALT 124
Query: 228 KVQGWETDDVEEIA-LKLSQWPKASEIRKRTAVITQGADPVVVAQDGK----LKKFPVIV 282
+ E + E A L LS+ PK ++T G +VA G + FPV
Sbjct: 125 GRRDLEVKEAAEAAALLLSKGPKVV-------IVTLGEKGAIVATRGGTEVHVPAFPV-- 175
Query: 283 LPKDKLVDTNGAGDAFVGGFLSQLV 307
K+VDT GAGDAF+ + L
Sbjct: 176 ----KVVDTTGAGDAFLAALAAGLA 196
|
The superfamily includes ribokinase, fructokinase, ketohexokinase, 2-dehydro-3-deoxygluconokinase, 1-phosphofructokinase, the minor 6-phosphofructokinase (PfkB), inosine-guanosine kinase, and adenosine kinase. Even though there is a high degree of structural conservation within this superfamily, their multimerization level varies widely, monomeric (e.g. adenosine kinase), dimeric (e.g. ribokinase), and trimeric (e.g THZ kinase). Length = 196 |
| >gnl|CDD|236858 PRK11142, PRK11142, ribokinase; Provisional | Back alignment and domain information |
|---|
Score = 76.1 bits (188), Expect = 1e-15
Identities = 71/271 (26%), Positives = 117/271 (43%), Gaps = 29/271 (10%)
Query: 50 MASKYNVEYIAGGATQNSIRVAQWMLQIPGA-TSYIGCIGKDKFGEEMKKNSKLAGVNV- 107
Y V + GA Q VA L GA ++I C+G D GE M++ G++
Sbjct: 30 TGRHYQVAFGGKGANQ---AVAAARL---GADIAFIACVGDDSIGESMRQQLAKDGIDTA 83
Query: 108 HYYEDESASTGTCAVCVVG-GERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGF 166
+ STG + V GE S+ + A ++ L+ A +
Sbjct: 84 PVSVIKGESTGVALIFVNDEGENSIGIHAGANAALTPALVEAHR--ELIANADALLMQ-- 139
Query: 167 FLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTF 226
L +++ A+ A + ++N AP E + L V D I NETEA
Sbjct: 140 -LETPLETVLAAAKIAKQHGTKVILN-PAP-ARELPDELLALV----DIITPNETEAEKL 192
Query: 227 SKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKD 286
+ ++ + DD + A L Q K E T +IT G+ V ++++G+ ++ P +
Sbjct: 193 TGIRVEDDDDAAKAAQVLHQ--KGIE----TVLITLGSRGVWLSENGEGQRVPG---FRV 243
Query: 287 KLVDTNGAGDAFVGGFLSQLVQEKPIEECVR 317
+ VDT AGD F G ++ L++ KP+ E +R
Sbjct: 244 QAVDTIAAGDTFNGALVTALLEGKPLPEAIR 274
|
Length = 306 |
| >gnl|CDD|238916 cd01941, YeiC_kinase_like, YeiC-like sugar kinase | Back alignment and domain information |
|---|
Score = 72.3 bits (178), Expect = 2e-14
Identities = 50/249 (20%), Positives = 97/249 (38%), Gaps = 32/249 (12%)
Query: 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTC-AVCVVGGERSLVANLSAAN 139
+ + +G D GE + + S+ AG+NV E ST + A+ G+ LV L+ +
Sbjct: 52 VALLSAVGDDSEGESILEESEKAGLNVRGIVFEGRSTASYTAILDKDGD--LVVALADMD 109
Query: 140 CYKSEHLKKPENWA-LVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFI 198
Y+ +++AK + + ++++ + AA + P
Sbjct: 110 IYELLTPDFLRKIREALKEAKPIVVDA---NLPEEALEYLLALAAKHG--------VPVA 158
Query: 199 CEFFK----DALEKVLPYMDYIFGNETEARTFSKVQGWETDD-VEEIALKLSQWPKASEI 253
E L +L +D + N E + +D + + L K
Sbjct: 159 FEPTSAPKLKKLFYLLHAIDLLTPNRAELEALAGALIENNEDENKAAKILLLPGIK---- 214
Query: 254 RKRTAVITQGADPVVVAQDGKL---KKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK 310
++T GA V+++ K FP + +V+ GAGDAFV G ++ L++
Sbjct: 215 ---NVIVTLGAKGVLLSSREGGVETKLFPAPQ--PETVVNVTGAGDAFVAGLVAGLLEGM 269
Query: 311 PIEECVRAG 319
+++ +R
Sbjct: 270 SLDDSLRFA 278
|
Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. Length = 288 |
| >gnl|CDD|185541 PTZ00292, PTZ00292, ribokinase; Provisional | Back alignment and domain information |
|---|
Score = 63.6 bits (155), Expect = 2e-11
Identities = 64/272 (23%), Positives = 105/272 (38%), Gaps = 30/272 (11%)
Query: 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVV---GGERSLVANLS 136
+ +G +G D FG + KN K GVN + E++STG A+ V G +V
Sbjct: 69 VAMVGMVGTDGFGSDTIKNFKRNGVNTSFVSRTENSSTG-LAMIFVDTKTGNNEIVIIPG 127
Query: 137 AANCYKSEHLKKPENWALVEKAKYFYIAG--FFLTVSPDSIQLVAEHAAANNKVFMMNLS 194
A N + + ++ + I L + D+++ E + +
Sbjct: 128 ANNALTPQMVDA--QTDNIQNICKYLICQNEIPLETTLDALKEAKERG-----CYTVFNP 180
Query: 195 APFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIR 254
AP + ++ L Y+ NE EA + + G E D E A K S K +
Sbjct: 181 APAPKLAEVEIIKPFLKYVSLFCVNEVEA---ALITGMEVTD-TESAFKAS---KELQQL 233
Query: 255 K-RTAVITQGADPVVVAQDGKLKKF--PVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKP 311
+IT GA+ ++ + V K VDT GAGD FVG + + K
Sbjct: 234 GVENVIITLGANGCLIVEKENEPVHVPGKRV----KAVDTTGAGDCFVGSMAYFMSRGKD 289
Query: 312 IEECVRAGCYTSHVIIQRSGC--TYPEKPEFN 341
++E + + + + R G +YP E
Sbjct: 290 LKESCKRANRIAAISVTRHGTQSSYPHPSELP 321
|
Length = 326 |
| >gnl|CDD|238915 cd01940, Fructoselysine_kinase_like, Fructoselysine kinase-like | Back alignment and domain information |
|---|
Score = 62.4 bits (152), Expect = 3e-11
Identities = 62/256 (24%), Positives = 105/256 (41%), Gaps = 31/256 (12%)
Query: 66 NSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV 125
N++ VA + ++ ++YIG +G D G ++ K GV++ + + V +V
Sbjct: 24 NALNVAVYAKRLGHESAYIGAVGNDDAGAHVRSTLKRLGVDISHCRVKEGENAVADVELV 83
Query: 126 GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT-VSPDSIQLVAEHAAA 184
G+R LS EH +A Y++ F L S + E A
Sbjct: 84 DGDRIFG--LSNKGGVAREHP---------FEADLEYLSQFDLVHTGIYSHEGHLEKALQ 132
Query: 185 NNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKL 244
+S F + D L+ V PY+D+ F + ++ +D+ + LK
Sbjct: 133 ALVGAGALISFDFSDRWDDDYLQLVCPYVDFAFFSASD----------LSDEEVKAKLK- 181
Query: 245 SQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL- 303
+A + ++T+G D + + V P + +VDT GAGD+F+ GFL
Sbjct: 182 ----EAVSRGAKLVIVTRGEDGAIAYDGAVF--YSVAPRPVE-VVDTLGAGDSFIAGFLL 234
Query: 304 SQLVQEKPIEECVRAG 319
S L I E +R G
Sbjct: 235 SLLAGGTAIAEAMRQG 250
|
Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown. Length = 264 |
| >gnl|CDD|238919 cd01944, YegV_kinase_like, YegV-like sugar kinase | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 2e-10
Identities = 57/282 (20%), Positives = 101/282 (35%), Gaps = 33/282 (11%)
Query: 58 YIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESAST 117
Y+ GG ++ VA L IP T G +G + +++++ + G+
Sbjct: 33 YVIGGGF--NVMVAASRLGIP--TVNAGPLGNGNWADQIRQAMRDEGI-EILLPPRGGDD 87
Query: 118 GTCAVCVV--GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSI 175
G C V +V GERS ++ A + +E V Y Y++G+ L S
Sbjct: 88 GGCLVALVEPDGERSFISISGAEQDWSTEWFATLT----VAPYDYVYLSGYTLASENASK 143
Query: 176 QLVAE--HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWE 233
++ E A + + P I + L+ ++ N EA F++
Sbjct: 144 VILLEWLEALPAGTTLVFDPG-PRISDIPDTILQALMAKRPIWSCNREEAAIFAERGD-- 200
Query: 234 TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVV----AQDGKLKKFPVIVLPKDKLV 289
+ V+ G++ + + F V K V
Sbjct: 201 ----PAAEASALRI---YAKTAAPVVVRLGSNGAWIRLPDGNTHIIPGFKV------KAV 247
Query: 290 DTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSG 331
DT GAGD GG L+ L + + + V + +++ RSG
Sbjct: 248 DTIGAGDTHAGGMLAGLAKGMSLADAVLLANAAAAIVVTRSG 289
|
Found only in bacteria, YegV-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. Length = 289 |
| >gnl|CDD|215434 PLN02813, PLN02813, pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 4e-09
Identities = 74/314 (23%), Positives = 122/314 (38%), Gaps = 41/314 (13%)
Query: 7 LLGMGNPLLDISSVVDDDFLNKYDIKLN--NAILAEEKHLPLYDEMASKYNVEYIAGGAT 64
+LG+G ++D S +VDD+FL + ++ I EE+ L Y AGG+
Sbjct: 72 VLGLGQAMVDFSGMVDDEFLERLGLEKGTRKVINHEERGKVLRALDGCSYKAS--AGGSL 129
Query: 65 QNSI----RVAQWMLQIPGA-TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESA--ST 117
N++ R+ P + G +G D G+ +KL NVH+ +T
Sbjct: 130 SNTLVALARLGSQSAAGPALNVAMAGSVGSDPLGDFY--RTKLRRANVHFLSQPVKDGTT 187
Query: 118 GTCAVCVV-GGERSLVANLSAANCYK--SEHLKKPENWA-LVEKAKYFYIAGFFLTVSPD 173
GT V +R++++ Y+ S + A + K++ + G+ + P
Sbjct: 188 GTVIVLTTPDAQRTMLS-------YQGTSSTVNYDSCLASAISKSRVLVVEGYLWEL-PQ 239
Query: 174 SIQLVA---EHAAANNKVFMMNLSAPFICEFFKDALEKVLP-YMDYIFGNETEARTFSKV 229
+I+ +A E A + + S E +D V+ Y D +F N EAR +
Sbjct: 240 TIEAIAQACEEAHRAGALVAVTASDVSCIERHRDDFWDVMGNYADILFANSDEARALCGL 299
Query: 230 QGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLV 289
+ E LS + +T GA + G+ P V
Sbjct: 300 G--SEESPESATRYLSHFCP-------LVSVTDGARGSYIGVKGEAVYIPP---SPCVPV 347
Query: 290 DTNGAGDAFVGGFL 303
DT GAGDA+ G L
Sbjct: 348 DTCGAGDAYAAGIL 361
|
Length = 426 |
| >gnl|CDD|236514 PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 2e-08
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 256 RTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQ 308
++T GA+ V+V G+++ FP P VDT GAGDAFV G L+ L Q
Sbjct: 214 ALLLVTLGAEGVLVHTRGQVQHFPA---PSVDPVDTTGAGDAFVAGLLAGLSQ 263
|
Length = 304 |
| >gnl|CDD|238918 cd01943, MAK32, MAK32 kinase | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 6e-08
Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 7/142 (4%)
Query: 196 PFICEFF-KDALEKVLPYMDYIFG-NETEARTFSKVQGWE--TDDVEEIALKLSQWPKAS 251
P C+ + L + LP +D +F N EA + E +D+ +E L+ +
Sbjct: 163 PDSCDPENLEDLLQALPRVD-VFSPNLEEAARLLGLPTSEPSSDEEKEAVLQALLFSGIL 221
Query: 252 EIRKRTAVITQGADPVVVAQ--DGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE 309
+ V+ G V G P K+VD G G++F+GGF + L
Sbjct: 222 QDPGGGVVLRCGKLGCYVGSADSGPELWLPAYHTKSTKVVDPTGGGNSFLGGFAAGLALT 281
Query: 310 KPIEECVRAGCYTSHVIIQRSG 331
K I+E G + I++ G
Sbjct: 282 KSIDEACIYGSVAASFAIEQVG 303
|
MAK32 is a protein found primarily in fungi that is necessary for the structural stability of L-A particles. The L-A virus particule is a specialized compartment for the transcription and replication of double-stranded RNA, known to infect yeast and other fungi. MAK32 is part of the host machinery used by the virus to multiply. Length = 328 |
| >gnl|CDD|238920 cd01945, ribokinase_group_B, Ribokinase-like subgroup B | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 2e-07
Identities = 57/284 (20%), Positives = 105/284 (36%), Gaps = 35/284 (12%)
Query: 37 ILAEEKHLPLYDEMASKYNVEYIAGG-ATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEE 95
++ P D + I GG A ++ VA+ Q IG +G D G
Sbjct: 12 LIYLVASFPGGDGKIVATDYAVIGGGNAANAAVAVARLGGQ----ARLIGVVGDDAIGRL 67
Query: 96 MKKNSKLAGVNVHYY-EDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWAL 154
+ GV+ + A + ++ + G+R+ ++ ++ A+
Sbjct: 68 ILAELAAEGVDTSFIVVAPGARSPISSITDITGDRATISI----TAIDTQAAPDSLPDAI 123
Query: 155 VEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMD 214
+ A + G P++ +A+ A A ++L LE++LP D
Sbjct: 124 LGGADAVLVDG----RQPEAALHLAQEARARGIPIPLDLDGGG-----LRVLEELLPLAD 174
Query: 215 YIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVV-VAQDG 273
+ +E R + ++ AL+L + +T G + + +DG
Sbjct: 175 HAICSENFLRPNTGSA-------DDEALELLASLGIPFV-----AVTLGEAGCLWLERDG 222
Query: 274 KLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVR 317
+L P ++VDT GAGD F G F L + P+ E +R
Sbjct: 223 ELFHVPA---FPVEVVDTTGAGDVFHGAFAHALAEGMPLREALR 263
|
Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. . Length = 284 |
| >gnl|CDD|182090 PRK09813, PRK09813, fructoselysine 6-kinase; Provisional | Back alignment and domain information |
|---|
Score = 50.9 bits (122), Expect = 2e-07
Identities = 51/269 (18%), Positives = 102/269 (37%), Gaps = 34/269 (12%)
Query: 64 TQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVC 123
N++ VA + + I +G D +G ++K++ GV++ + + T V
Sbjct: 23 GGNAVNVAVYCTRYGIQPGCITWVGDDDYGTKLKQDLARMGVDISHVHTKHGVTAQTQVE 82
Query: 124 VVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAA 183
+ +R Y + ++AL E+ + +A + + + +I AE A
Sbjct: 83 LHDNDRVF-------GDYTEGVM---ADFALSEEDYAW-LAQYDIVHA--AIWGHAEDAF 129
Query: 184 ANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALK 243
+ F ++ + ++P++DY F + E + LK
Sbjct: 130 PQLHAAGKLTAFDFSDKWDSPLWQTLVPHLDYAFA-------------SAPQEDEFLRLK 176
Query: 244 LSQWPKASEIRKRTAVITQGADPVVVAQDG-KLKKFPVIVLPKDKLVDTNGAGDAFVGGF 302
+ ++T G + +A DG + + P +VDT GAGD+F+ GF
Sbjct: 177 MKA---IVARGAGVVIVTLG-ENGSIAWDGAQFWRQAPE--PVT-VVDTMGAGDSFIAGF 229
Query: 303 LSQLVQEKPIEECVRAGCYTSHVIIQRSG 331
L + + + + G + IQ G
Sbjct: 230 LCGWLAGMTLPQAMAQGTACAAKTIQYHG 258
|
Length = 260 |
| >gnl|CDD|234133 TIGR03168, 1-PFK, hexose kinase, 1-phosphofructokinase family | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 3e-07
Identities = 49/173 (28%), Positives = 73/173 (42%), Gaps = 31/173 (17%)
Query: 153 ALVEKAKYFYIAGFF-LTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVL- 210
L+ I+G V PD + A A I + +AL + L
Sbjct: 123 ELLASGDIVVISGSLPPGVPPDFYAQLIAIARKRG--------AKVILDTSGEALREALA 174
Query: 211 --PYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTA---VITQGAD 265
P++ I N E G E EEI A E+ R A +++ GAD
Sbjct: 175 AKPFL--IKPNHEELEELF---GRELKTEEEI------IEAARELLDRGAENVLVSLGAD 223
Query: 266 -PVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVR 317
++V ++G LK P PK ++V+T GAGD+ V GFL+ L + +EE +R
Sbjct: 224 GALLVTKEGALKATP----PKVEVVNTVGAGDSMVAGFLAGLARGLSLEEALR 272
|
This family consists largely of 1-phosphofructokinases, but also includes tagatose-6-kinases and 6-phosphofructokinases. Length = 303 |
| >gnl|CDD|238922 cd01947, Guanosine_kinase_like, Guanosine kinase-like sugar kinases | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 5e-07
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 253 IRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPI 312
R ++T+G ++ G+ P K K+ D+ GAGD+F GF+ L++ I
Sbjct: 188 PFPRYLIVTEGELGAILYPGGRYNHVP---AKKAKVPDSTGAGDSFAAGFIYGLLKGWSI 244
Query: 313 EECVRAG 319
EE + G
Sbjct: 245 EEALELG 251
|
Found in bacteria and archaea, the guanosine kinase-like group is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. Length = 265 |
| >gnl|CDD|238570 cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases | Back alignment and domain information |
|---|
Score = 48.7 bits (117), Expect = 1e-06
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 259 VITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRA 318
+++ GAD ++ + + PK K+V T GAGD+ V GF++ L Q +EE +R
Sbjct: 218 LVSLGADGALLVTKDGVYRASP---PKVKVVSTVGAGDSMVAGFVAGLAQGLSLEEALRL 274
Query: 319 G 319
Sbjct: 275 A 275
|
FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis. Length = 289 |
| >gnl|CDD|234367 TIGR03828, pfkB, 1-phosphofructokinase | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 4e-06
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 18/128 (14%)
Query: 195 APFICEFFKDALEKVLPYMDY-IFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEI 253
A I + +AL L + I N+ E G E +EEI A E+
Sbjct: 158 AKVILDTSGEALRDGLKAKPFLIKPNDEELEELF---GRELKTLEEII------EAAREL 208
Query: 254 RKRTA---VITQGADPVV-VAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE 309
A +I+ GAD + V ++G L P PK ++V T GAGD+ V GFL+ L
Sbjct: 209 LDLGAENVLISLGADGALLVTKEGALFAQP----PKGEVVSTVGAGDSMVAGFLAGLESG 264
Query: 310 KPIEECVR 317
+EE +R
Sbjct: 265 LSLEEALR 272
|
This enzyme acts in concert with the fructose-specific phosphotransferase system (PTS) which imports fructose as fructose-1-phosphate. The action of 1-phosphofructokinase results in beta-D-fructose-1,6-bisphosphate and is an entry point into glycolysis (GenProp0688). Length = 304 |
| >gnl|CDD|238912 cd01937, ribokinase_group_D, Ribokinase-like subgroup D | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 5e-06
Identities = 48/282 (17%), Positives = 82/282 (29%), Gaps = 45/282 (15%)
Query: 59 IAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFG-----------EEMKKNSKLAGVNV 107
I G T + I + PG + + + G + K S L +
Sbjct: 4 IIGHVTIDEIVTNGSGVVKPGGPATYASLTLSRLGLTVKLVTKVGRDYPDKWSDLFDNGI 63
Query: 108 HYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFF 167
S T T + R+ A +E P + E +
Sbjct: 64 EVISLLSTETTTFELNYTNEGRTRTLLAKCAAIPDTE---SPLSTITAEI---VILGPVP 117
Query: 168 LTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDAL--EKVLPYMDYIFGNETEART 225
+SP + A F+ + F+ ++ L +L D + + EA
Sbjct: 118 EEISPSLFRKFA---------FISLDAQGFLRRANQEKLIKCVILKLHDVLKLSRVEAEV 168
Query: 226 FSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPK 285
S E+A + + ++T G + + P K
Sbjct: 169 IS--------TPTELARLIKETGVK------EIIVTDGEEGGYIFDGNGKYTIP---ASK 211
Query: 286 DKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVII 327
+VD GAGD F+ FL + K I+E + I
Sbjct: 212 KDVVDPTGAGDVFLAAFLYSRLSGKDIKEAAEFAAAAAAKFI 253
|
Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. Length = 254 |
| >gnl|CDD|224030 COG1105, FruK, Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 259 VITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRA 318
+++ GAD ++ + PK ++V T GAGD+ V GFL+ L++ K +EE +R
Sbjct: 219 IVSLGADGALLVTAEGVYF---ASPPKVQVVSTVGAGDSMVAGFLAGLLKGKSLEEALRF 275
Query: 319 G 319
Sbjct: 276 A 276
|
Length = 310 |
| >gnl|CDD|215183 PLN02323, PLN02323, probable fructokinase | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 4e-05
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 6/40 (15%)
Query: 273 GKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPI 312
G+++ F V K VDT GAGDAFVGG LSQL ++ +
Sbjct: 251 GRVEGFKV------KAVDTTGAGDAFVGGLLSQLAKDLSL 284
|
Length = 330 |
| >gnl|CDD|238914 cd01939, Ketohexokinase, Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 4e-05
Identities = 29/152 (19%), Positives = 61/152 (40%), Gaps = 22/152 (14%)
Query: 156 EKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDY 215
+ + + G + +Q + EH NN+ + ++ E ++ L ++ Y D
Sbjct: 126 TQYGWIHFEGRNPDETLRMMQHIEEH---NNRRPEIRITISVEVEKPREELLELAAYCDV 182
Query: 216 IFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVI----TQGADPVVVAQ 271
+F ++ A++ G+++ + + P +K ++ QGA +
Sbjct: 183 VFVSKDWAQSR----GYKSPE----ECLRGEGP---RAKKAALLVCTWGDQGAG--ALGP 229
Query: 272 DGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 303
DG+ P ++VDT GAGD F +
Sbjct: 230 DGEYVHSPA--HKPIRVVDTLGAGDTFNAAVI 259
|
KHK can also phosphorylate several other furanose sugars. It is found in higher eukaryotes where it is believed to function as a dimer and requires K(+) and ATP to be active. In humans, hepatic KHK deficiency causes fructosuria, a benign inborn error of metabolism. Length = 290 |
| >gnl|CDD|238921 cd01946, ribokinase_group_C, Ribokinase-like subgroup C | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 5e-04
Identities = 33/135 (24%), Positives = 50/135 (37%), Gaps = 19/135 (14%)
Query: 191 MNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKA 250
MN F + L+KVL +D + N+ EAR + A +
Sbjct: 146 MN----FWISIKPEKLKKVLAKVDVVIINDGEARQLT-----------GAANLVKAARLI 190
Query: 251 SEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK 310
+ + +I +G ++ D F P + + D GAGD F GGF+ L +K
Sbjct: 191 LAMGPKALIIKRGEYGALLFTDDGY--FAAPAYPLESVFDPTGAGDTFAGGFIGYLASQK 248
Query: 311 --PIEECVRAGCYTS 323
RA Y S
Sbjct: 249 DTSEANMRRAIIYGS 263
|
Found only in bacteria, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. Length = 277 |
| >gnl|CDD|236514 PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 6e-04
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 11/76 (14%)
Query: 60 AGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTG 118
GGA N VA + ++ G + +IG +G D FG M++ + GV+ Y D + T
Sbjct: 27 PGGAPAN---VAVGIARLGGESGFIGRVGDDPFGRFMQQTLQDEGVDTTYLRLDPAHRTS 83
Query: 119 TCAVCVVG----GERS 130
T VV GERS
Sbjct: 84 T---VVVDLDDQGERS 96
|
Length = 304 |
| >gnl|CDD|178237 PLN02630, PLN02630, pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 8e-04
Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 26/143 (18%)
Query: 199 CEFFKDALEKVLPYMDYIFGN-ETEARTFSKVQGW-------ET---DDVEEIA-LKLSQ 246
E + LE+++ D + + + R F V G ET D + I LK S
Sbjct: 130 GEILPETLERMVEICDVVVVDIQALIRVFDPVDGTVKLVKLEETGFYDMLPRIGFLKASS 189
Query: 247 ----WPKASEIRKRTAVI-TQGADPV-VVAQDGKLK--KFPVIVLPKDKLVDTNGAGDAF 298
+ E+R++ VI T G + +DG+++ FP I VD GAGD+F
Sbjct: 190 EEALFIDVEEVRQKCCVIVTNGKKGCRIYWKDGEMRVPPFPAIQ------VDPTGAGDSF 243
Query: 299 VGGFLSQLVQEKPIEECVRAGCY 321
+GGF++ LVQ + + G Y
Sbjct: 244 LGGFVAGLVQGLAVPDAALLGNY 266
|
Length = 335 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 341 | |||
| PTZ00247 | 345 | adenosine kinase; Provisional | 100.0 | |
| KOG2854 | 343 | consensus Possible pfkB family carbohydrate kinase | 100.0 | |
| PLN02548 | 332 | adenosine kinase | 100.0 | |
| PLN02813 | 426 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| PRK15074 | 434 | inosine/guanosine kinase; Provisional | 100.0 | |
| PLN02379 | 367 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| cd01168 | 312 | adenosine_kinase Adenosine kinase (AK) catalyzes t | 100.0 | |
| PRK11142 | 306 | ribokinase; Provisional | 100.0 | |
| cd01174 | 292 | ribokinase Ribokinase catalyses the phosphorylatio | 100.0 | |
| PTZ00292 | 326 | ribokinase; Provisional | 100.0 | |
| PLN02341 | 470 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| cd01944 | 289 | YegV_kinase_like YegV-like sugar kinase. Found onl | 100.0 | |
| PRK09850 | 313 | pseudouridine kinase; Provisional | 100.0 | |
| cd01945 | 284 | ribokinase_group_B Ribokinase-like subgroup B. Fou | 100.0 | |
| PLN02967 | 581 | kinase | 100.0 | |
| PLN02323 | 330 | probable fructokinase | 100.0 | |
| COG0524 | 311 | RbsK Sugar kinases, ribokinase family [Carbohydrat | 100.0 | |
| TIGR02152 | 293 | D_ribokin_bact ribokinase. This model describes ri | 100.0 | |
| PRK09434 | 304 | aminoimidazole riboside kinase; Provisional | 100.0 | |
| PF00294 | 301 | PfkB: pfkB family carbohydrate kinase; InterPro: I | 100.0 | |
| cd01942 | 279 | ribokinase_group_A Ribokinase-like subgroup A. Fou | 100.0 | |
| cd01167 | 295 | bac_FRK Fructokinases (FRKs) mainly from bacteria | 100.0 | |
| PRK09954 | 362 | putative kinase; Provisional | 100.0 | |
| cd01166 | 294 | KdgK 2-keto-3-deoxygluconate kinase (KdgK) phospho | 100.0 | |
| cd01172 | 304 | RfaE_like RfaE encodes a bifunctional ADP-heptose | 100.0 | |
| cd01940 | 264 | Fructoselysine_kinase_like Fructoselysine kinase-l | 100.0 | |
| cd01947 | 265 | Guanosine_kinase_like Guanosine kinase-like sugar | 100.0 | |
| TIGR03828 | 304 | pfkB 1-phosphofructokinase. This enzyme acts in co | 100.0 | |
| cd01939 | 290 | Ketohexokinase Ketohexokinase (fructokinase, KHK) | 100.0 | |
| PLN02543 | 496 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| TIGR02198 | 315 | rfaE_dom_I rfaE bifunctional protein, domain I. Rf | 100.0 | |
| cd01943 | 328 | MAK32 MAK32 kinase. MAK32 is a protein found prima | 100.0 | |
| PRK10294 | 309 | 6-phosphofructokinase 2; Provisional | 100.0 | |
| cd01941 | 288 | YeiC_kinase_like YeiC-like sugar kinase. Found in | 100.0 | |
| KOG2855 | 330 | consensus Ribokinase [Carbohydrate transport and m | 100.0 | |
| PRK09513 | 312 | fruK 1-phosphofructokinase; Provisional | 100.0 | |
| cd01164 | 289 | FruK_PfkB_like 1-phosphofructokinase (FruK), minor | 100.0 | |
| PRK09813 | 260 | fructoselysine 6-kinase; Provisional | 100.0 | |
| PRK13508 | 309 | tagatose-6-phosphate kinase; Provisional | 100.0 | |
| TIGR03168 | 303 | 1-PFK hexose kinase, 1-phosphofructokinase family. | 100.0 | |
| TIGR01231 | 309 | lacC tagatose-6-phosphate kinase. This enzyme is p | 100.0 | |
| COG1105 | 310 | FruK Fructose-1-phosphate kinase and related fruct | 100.0 | |
| PRK11316 | 473 | bifunctional heptose 7-phosphate kinase/heptose 1- | 100.0 | |
| cd01946 | 277 | ribokinase_group_C Ribokinase-like subgroup C. Fou | 100.0 | |
| cd01937 | 254 | ribokinase_group_D Ribokinase-like subgroup D. Fou | 100.0 | |
| PLN02630 | 335 | pfkB-type carbohydrate kinase family protein | 100.0 | |
| COG2870 | 467 | RfaE ADP-heptose synthase, bifunctional sugar kina | 100.0 | |
| KOG2947 | 308 | consensus Carbohydrate kinase [Carbohydrate transp | 100.0 | |
| cd00287 | 196 | ribokinase_pfkB_like ribokinase/pfkB superfamily: | 99.96 | |
| cd01173 | 254 | pyridoxal_pyridoxamine_kinase Pyridoxal kinase pla | 99.82 | |
| PRK12412 | 268 | pyridoxal kinase; Reviewed | 99.8 | |
| TIGR00687 | 286 | pyridox_kin pyridoxal kinase. ThiD and related pro | 99.79 | |
| TIGR00097 | 254 | HMP-P_kinase phosphomethylpyrimidine kinase. This | 99.79 | |
| PRK05756 | 286 | pyridoxamine kinase; Validated | 99.78 | |
| PRK06427 | 266 | bifunctional hydroxy-methylpyrimidine kinase/ hydr | 99.78 | |
| PRK12413 | 253 | phosphomethylpyrimidine kinase; Provisional | 99.78 | |
| cd01169 | 242 | HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrim | 99.77 | |
| PRK07105 | 284 | pyridoxamine kinase; Validated | 99.76 | |
| PRK08176 | 281 | pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpy | 99.75 | |
| PRK08573 | 448 | phosphomethylpyrimidine kinase; Provisional | 99.74 | |
| PRK12616 | 270 | pyridoxal kinase; Reviewed | 99.73 | |
| KOG3009 | 614 | consensus Predicted carbohydrate kinase, contains | 99.66 | |
| PLN02898 | 502 | HMP-P kinase/thiamin-monophosphate pyrophosphoryla | 99.59 | |
| PTZ00344 | 296 | pyridoxal kinase; Provisional | 99.57 | |
| PTZ00347 | 504 | phosphomethylpyrimidine kinase; Provisional | 99.56 | |
| PF08543 | 246 | Phos_pyr_kin: Phosphomethylpyrimidine kinase; Inte | 99.55 | |
| cd01171 | 254 | YXKO-related B.subtilis YXKO protein of unknown fu | 99.55 | |
| COG0351 | 263 | ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidi | 99.51 | |
| PRK09517 | 755 | multifunctional thiamine-phosphate pyrophosphoryla | 99.48 | |
| cd01170 | 242 | THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (T | 99.48 | |
| PRK14713 | 530 | multifunctional hydroxymethylpyrimidine phosphokin | 99.47 | |
| PLN02978 | 308 | pyridoxal kinase | 99.46 | |
| TIGR00196 | 272 | yjeF_cterm yjeF C-terminal region, hydroxyethylthi | 99.4 | |
| COG2240 | 281 | PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coe | 99.32 | |
| PTZ00493 | 321 | phosphomethylpyrimidine kinase; Provisional | 99.16 | |
| PRK09355 | 263 | hydroxyethylthiazole kinase; Validated | 99.06 | |
| TIGR00694 | 249 | thiM hydroxyethylthiazole kinase. This model repre | 98.94 | |
| KOG2599 | 308 | consensus Pyridoxal/pyridoxine/pyridoxamine kinase | 98.7 | |
| PRK14039 | 453 | ADP-dependent glucokinase; Provisional | 98.61 | |
| PRK03979 | 463 | ADP-specific phosphofructokinase; Provisional | 98.54 | |
| KOG2598 | 523 | consensus Phosphomethylpyrimidine kinase [Coenzyme | 98.32 | |
| TIGR02045 | 446 | P_fruct_ADP ADP-specific phosphofructokinase. Phos | 98.29 | |
| PF04587 | 444 | ADP_PFK_GK: ADP-specific Phosphofructokinase/Gluco | 98.2 | |
| PRK14038 | 453 | ADP-dependent glucokinase; Provisional | 97.79 | |
| PF02110 | 246 | HK: Hydroxyethylthiazole kinase family; InterPro: | 97.76 | |
| KOG3974 | 306 | consensus Predicted sugar kinase [Carbohydrate tra | 97.74 | |
| PF01256 | 242 | Carb_kinase: Carbohydrate kinase; InterPro: IPR000 | 97.73 | |
| PRK10565 | 508 | putative carbohydrate kinase; Provisional | 97.71 | |
| COG2145 | 265 | ThiM Hydroxyethylthiazole kinase, sugar kinase fam | 97.53 | |
| cd01938 | 445 | ADPGK_ADPPFK ADP-dependent glucokinase (ADPGK) and | 96.41 | |
| COG0063 | 284 | Predicted sugar kinase [Carbohydrate transport and | 95.9 | |
| COG4809 | 466 | Archaeal ADP-dependent phosphofructokinase/glucoki | 94.2 | |
| KOG4184 | 478 | consensus Predicted sugar kinase [Carbohydrate tra | 88.02 | |
| PRK10076 | 213 | pyruvate formate lyase II activase; Provisional | 86.36 |
| >PTZ00247 adenosine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-54 Score=392.12 Aligned_cols=340 Identities=51% Similarity=0.882 Sum_probs=292.1
Q ss_pred CCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCC-c
Q 019448 2 AQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPG-A 80 (341)
Q Consensus 2 ~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~-~ 80 (341)
|..++|+|+|++++|++..++++|+.++.+.+|+..+.+..++|..++..........+||++.|+|+++++|..+|. +
T Consensus 3 ~~~~~i~~iG~~~~D~~~~v~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~N~A~~la~lg~~g~~~ 82 (345)
T PTZ00247 3 SAPKKLLGFGNPLLDISAHVSDEFLEKYGLELGSAILAEEKQLPIFEELESIPNVSYVPGGSALNTARVAQWMLQAPKGF 82 (345)
T ss_pred CCCceEEEECCceEEEEEeeCHHHHHHcCCCCCceeechHHHHHHHHHHHhccCceecCCCHHHHHHHHHHHHhcCCCCc
Confidence 557899999999999999999999999989999999999779999999999988999999999999999998655566 9
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccceE
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKY 160 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 160 (341)
+.|+|.||+|.+|+.+++.|++.||+++++...+.+|+.+++++++++|+++.+.+++..++++++........+.++++
T Consensus 83 v~~ig~vG~D~~G~~i~~~l~~~GVd~~~~~~~~~~Tg~~~i~v~~~~r~~~~~~ga~~~l~~~~i~~~~~~~~l~~~~~ 162 (345)
T PTZ00247 83 VCYVGCVGDDRFAEILKEAAEKDGVEMLFEYTTKAPTGTCAVLVCGKERSLVANLGAANHLSAEHMQSHAVQEAIKTAQL 162 (345)
T ss_pred EEEEEEeccchhHHHHHHHHHHcCCeeeccccCCCCcEEEEEEEcCCCcccccCcchhhcCChHHcCcHHHHHHHhhCCE
Confidence 99999999999999999999999999988755667899998888778999988888888888888874222346889999
Q ss_pred EEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHH
Q 019448 161 FYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 240 (341)
Q Consensus 161 v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~ 240 (341)
+|++++.+..+.+.+..+++.++++++++++|++.+.+....++.++++++++|++++|++|++.|++...++.++++++
T Consensus 163 v~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~~~Dil~~N~~Ea~~l~g~~~~~~~~~~~~ 242 (345)
T PTZ00247 163 YYLEGFFLTVSPNNVLQVAKHARESGKLFCLNLSAPFISQFFFERLLQVLPYVDILFGNEEEAKTFAKAMKWDTEDLKEI 242 (345)
T ss_pred EEEEEEEecccHHHHHHHHHHHHHcCCEEEEECCcHHHHHHHHHHHHHHHhhCCEEEeCHHHHHHHhhccCCCccCHHHH
Confidence 99999766667899999999999999999999876655434445588899999999999999999987433334578888
Q ss_pred HHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHH
Q 019448 241 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGC 320 (341)
Q Consensus 241 ~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~ 320 (341)
++.+.+++.+...+.+.+|||+|++|++++++++.+++|++++++.+++|||||||+|+|||+++|++|+++++|+++|+
T Consensus 243 ~~~l~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~~~vVDTtGAGDaF~agfl~~l~~g~~~~~al~~a~ 322 (345)
T PTZ00247 243 AARIAMLPKYSGTRPRLVVFTQGPEPTLIATKDGVTSVPVPPLDQEKIVDTNGAGDAFVGGFLAQYANGKDIDRCVEAGH 322 (345)
T ss_pred HHHHHhccccccCCCCEEEEecCCCceEEEECCEEEEEeccccCCCCccCCCChHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 88875432111235789999999999999999888888887664346899999999999999999999999999999999
Q ss_pred HHhhhhhhhccccCCCCCCCC
Q 019448 321 YTSHVIIQRSGCTYPEKPEFN 341 (341)
Q Consensus 321 ~~Aa~~v~~~g~~~p~~~~~~ 341 (341)
++|+++|++.|+.+|..++++
T Consensus 323 ~aAa~~v~~~Ga~~~~~~~~~ 343 (345)
T PTZ00247 323 YSAQVIIQHNGCTYPEKPPFL 343 (345)
T ss_pred HHHHHHHhccCCCCCCCCCCC
Confidence 999999999999988887653
|
|
| >KOG2854 consensus Possible pfkB family carbohydrate kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-52 Score=359.25 Aligned_cols=339 Identities=65% Similarity=1.117 Sum_probs=316.8
Q ss_pred CCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEE
Q 019448 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATS 82 (341)
Q Consensus 3 ~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~ 82 (341)
++...+.+|+++||+...+|++||++|||+.|+.++.+.++.+..++.+........+||++.|++++++|+++....+.
T Consensus 5 ~E~il~G~gnpLLD~~a~Vd~~~L~KygL~~n~ail~d~~~~~~~~E~~~~~~~~~~AGGs~qNt~R~aq~~~~~p~~~~ 84 (343)
T KOG2854|consen 5 PEGILVGLGNPLLDISAVVDDEFLDKYGLKLNDAILADDKHLGLFDELMEGFNVKYSAGGSAQNTLRIAQWLLQQPGATV 84 (343)
T ss_pred ccceeeccCccceeeeeccCHHHHHHcCCCCCcceecchhhHHHHHHHhhcccEEecCCchhHHHHHHHHHHccCCCceE
Confidence 35567789999999999999999999999999999999999999999999999999999999999999999887566999
Q ss_pred EEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccceEEE
Q 019448 83 YIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFY 162 (341)
Q Consensus 83 ~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 162 (341)
|+|.+|+|.+|+.+++.+++.||+..+...++.+|+.|.+++++.+|+++.+.++.+.++.++++.+++|..++++.++|
T Consensus 85 f~GsvG~Dk~ge~l~~~~~~aGv~~~yq~~~d~~TGtCavli~~~nRSL~anLgAAn~f~~dhl~~~~~~~lveka~v~y 164 (343)
T KOG2854|consen 85 FFGSVGKDKFGELLKSKARAAGVNVHYQVKEDGPTGTCAVLITGDNRSLCANLGAANCFKVDHLDKEENWALVEKAKVFY 164 (343)
T ss_pred EEeeccCchHHHHHHHHHHhcCceEEEEeccCCCCceEEEEEeCCCcchhhccchhhccCHHHhcchhhhhhhhheeEEE
Confidence 99999999999999999999999999999999999999999987779999999999999999999888999999999999
Q ss_pred EeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHH
Q 019448 163 IAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL 242 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~ 242 (341)
+.|+++..+|+.+..+.+.+.+.+.++.++++.+.+...+.+.+.++++++|+++.|++|++.++...++...+..+.+.
T Consensus 165 v~Gffltv~p~ai~~v~qh~~e~~r~~~lnlsapfI~q~~~~~l~~v~~y~DiifgNe~EA~af~~~~~~~t~dv~eia~ 244 (343)
T KOG2854|consen 165 VAGFFLTVSPDAIRKVAQHAAENNRVFTLNLSAPFISQFFKDALDKVLPYADIIFGNEDEAAAFARAHGWETKDVKEIAL 244 (343)
T ss_pred EEEEEEEeChHHHHHHHHHHHHhcchhheeccchhHHHHHHHHHHhhcCcceEEEcCHHHHHHHHHhhCCcccchHHHhh
Confidence 99999999999999999999999999999999999989899999999999999999999999999998998888888887
Q ss_pred HHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHHH
Q 019448 243 KLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYT 322 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~ 322 (341)
....+.+......+.++||.|.+++....+++.+.+|..+.+..+++||+||||+|++||+++|.+|.++++|++.|+.+
T Consensus 245 ~~~~~~k~~~~~~r~vvit~g~~~~i~~~~~~v~~~~v~~~~~~~ivDtnGAGDaFvgGFl~~l~qg~~l~~cir~g~~a 324 (343)
T KOG2854|consen 245 KLSALPKVNGTRPRTVVITQGPDPVIVAEDGKVTAYPVLPLPVEEIVDTNGAGDAFVGGFLSQLVQGKSLEECIRAGSYA 324 (343)
T ss_pred HhhccccccccccceEEEccCCCceEEecCCceEEeccccccceeeeeCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 77665543446678999999999999998888888888888888999999999999999999999999999999999999
Q ss_pred hhhhhhhccccCCCCCCCC
Q 019448 323 SHVIIQRSGCTYPEKPEFN 341 (341)
Q Consensus 323 Aa~~v~~~g~~~p~~~~~~ 341 (341)
|+.+++..|+.+|+.++|.
T Consensus 325 a~~vi~~~G~~~p~~~~~~ 343 (343)
T KOG2854|consen 325 ASHVIRRVGCTVPEKPDFH 343 (343)
T ss_pred hhheeeccCCCCCCCCCCC
Confidence 9999999999999998873
|
|
| >PLN02548 adenosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-52 Score=379.35 Aligned_cols=332 Identities=85% Similarity=1.324 Sum_probs=284.2
Q ss_pred EcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEeeeec
Q 019448 10 MGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGK 89 (341)
Q Consensus 10 iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~~vG~ 89 (341)
+|++++|++..++++||.+|++++|+..+.+.+++|.+++..........+||++.|+|.+++++.++|.++.|+|.+|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~Nva~~a~~l~~lg~~~~~ig~vG~ 80 (332)
T PLN02548 1 MGNPLLDISAVVDQDFLDKYDVKLNNAILAEEKHLPMYDELASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYMGCIGK 80 (332)
T ss_pred CCCceeEEEEecCHHHHHHcCCCCCceeechHHHHHHHHHHhccCCceecCCcHHHHHHHHHHHHhcCCCcEEEEEEEcC
Confidence 69999999999999999999999999999999999999999999999999999999998888776678899999999999
Q ss_pred CchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccceEEEEeccccc
Q 019448 90 DKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT 169 (341)
Q Consensus 90 D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~i~~~~~~ 169 (341)
|.+|+++++.|++.||+++++...+.+|+.+++++++|+|.++.+.++...++++++...+.+..+...+++|++++.+.
T Consensus 81 D~~g~~i~~~L~~~gVd~~~~~~~~~~T~~~~i~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~ 160 (332)
T PLN02548 81 DKFGEEMKKCATAAGVNVHYYEDESTPTGTCAVLVVGGERSLVANLSAANCYKVEHLKKPENWALVEKAKFYYIAGFFLT 160 (332)
T ss_pred ChhHHHHHHHHHHcCCceeeeccCCCCCceEEEEEecCCceeeeccchhhcCCHHHhcChhhHhHHhhCCEEEEEEEEcc
Confidence 99999999999999999998865667798888877788898877766666666666553223456789999999998766
Q ss_pred cCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHHHHhcCCc
Q 019448 170 VSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPK 249 (341)
Q Consensus 170 ~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~~l~~~~~ 249 (341)
.+++.+..+++.+++++.++++|++.+.|.....+.++++++++|++++|++|++.+++....+.++.+++++++.++..
T Consensus 161 ~~~~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~l~~~~~ 240 (332)
T PLN02548 161 VSPESIMLVAEHAAANNKTFMMNLSAPFICEFFKDQLMEALPYVDFLFGNETEARTFAKVQGWETEDVEEIALKISALPK 240 (332)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEECCChhHHHHhHHHHHHHHhhCCEEEecHHHHHHHhCccCCCcccHHHHHHHHHHhhh
Confidence 77888999999999999999999987776655566688999999999999999999987654444567676666532210
Q ss_pred cccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHHHhhhhhhh
Q 019448 250 ASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQR 329 (341)
Q Consensus 250 ~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~Aa~~v~~ 329 (341)
....+++.+|||+|++|++++++++.+++|++++++++++|||||||+|+|||+++|++|+++++|+++|+++|+++|++
T Consensus 241 ~~g~~~~~vvvT~G~~G~~~~~~~~~~~~pa~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~l~eal~~a~aaAa~~v~~ 320 (332)
T PLN02548 241 ASGTHKRTVVITQGADPTVVAEDGKVKEFPVIPLPKEKLVDTNGAGDAFVGGFLSQLVQGKDIEECVRAGNYAANVIIQR 320 (332)
T ss_pred hccccCCEEEEEeCCCcEEEEECCeEEEeccccCCcCccccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhc
Confidence 01225789999999999999998888888876555568999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCC
Q 019448 330 SGCTYPEKPEFN 341 (341)
Q Consensus 330 ~g~~~p~~~~~~ 341 (341)
.|+..|.++.+.
T Consensus 321 ~G~~~~~~~~~~ 332 (332)
T PLN02548 321 SGCTYPEKPDFS 332 (332)
T ss_pred cCCCCCCCccCC
Confidence 999999988763
|
|
| >PLN02813 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-48 Score=363.27 Aligned_cols=312 Identities=19% Similarity=0.283 Sum_probs=262.9
Q ss_pred CceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCC-----
Q 019448 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIP----- 78 (341)
Q Consensus 4 ~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg----- 78 (341)
..+|+++|++++|++..++++||.+|++++++..+.+.+..-...+..........+||++.|+|+++++ ||
T Consensus 69 ~~~vl~iG~~~vDi~~~v~~~fl~~~~lp~~~~~~i~~~~~~~l~e~~~~~~~~~~~GG~~~N~Avalar---LG~~~~~ 145 (426)
T PLN02813 69 RWDVLGLGQAMVDFSGMVDDEFLERLGLEKGTRKVINHEERGKVLRALDGCSYKASAGGSLSNTLVALAR---LGSQSAA 145 (426)
T ss_pred cceEEEeCCceeEEEEecCHHHHHHcCCCcCcccccCHHHHHHHHHHhhccCceEecCcHHHHHHHHHHH---hcccccc
Confidence 5689999999999999999999999999999987776655445555666777889999999999999998 45
Q ss_pred ---CcEEEEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhh
Q 019448 79 ---GATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWAL 154 (341)
Q Consensus 79 ---~~v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (341)
.+|.|+|.||+|.+|+++++.|++.||++.++...+.+|+.++++++ +|+|+++.+.+++..++++++. ...
T Consensus 146 ~~~~~v~~ig~VG~D~~G~~i~~~L~~~GVd~~~~~~~~~~Tg~~~ilv~~~gertii~~~Ga~~~l~~~~~~----~~~ 221 (426)
T PLN02813 146 GPALNVAMAGSVGSDPLGDFYRTKLRRANVHFLSQPVKDGTTGTVIVLTTPDAQRTMLSYQGTSSTVNYDSCL----ASA 221 (426)
T ss_pred CCCCcEEEEEEeCCChHHHHHHHHHHHcCCcccceecCCCCceEEEEEEcCCCCceeeeccCchhhCCccccC----HHH
Confidence 69999999999999999999999999999988766678999988886 7999999888877777665553 356
Q ss_pred hccceEEEEeccccccC--HHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHH-HhhcCCCcEEecCHHHHHHHhhhcC
Q 019448 155 VEKAKYFYIAGFFLTVS--PDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDAL-EKVLPYMDYIFGNETEARTFSKVQG 231 (341)
Q Consensus 155 l~~~~~v~i~~~~~~~~--~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~-~~~l~~~dvl~~n~~E~~~l~~~~~ 231 (341)
+++++++|++++.+..+ .+.+..+++.++++|+++++|+++......+++.+ ..+++++|++++|++|+..+++..
T Consensus 222 i~~adiv~l~g~~~~~~~~~~~~~~~~~~ak~~g~~v~~d~s~~~~~~~~~~~l~~~ll~~vDil~~Ne~Ea~~l~g~~- 300 (426)
T PLN02813 222 ISKSRVLVVEGYLWELPQTIEAIAQACEEAHRAGALVAVTASDVSCIERHRDDFWDVMGNYADILFANSDEARALCGLG- 300 (426)
T ss_pred HhcCCEEEEEeeecCCCchHHHHHHHHHHHHHcCCEEEEECCCcchhhhhHHHHHHHHHhcCCEEEeCHHHHHHHhCCC-
Confidence 89999999998765443 37788999999999999999988653332233333 455689999999999999998742
Q ss_pred CCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCC-
Q 019448 232 WETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK- 310 (341)
Q Consensus 232 ~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~- 310 (341)
..++++++++.+ . .+++.+|||+|++|++++++++.+++|++++ +++|||||||+|+|||++++++|+
T Consensus 301 -~~~~~~~a~~~L------~-~~~~~VVVT~G~~Ga~~~~~~~~~~~pa~~v---~vVDTtGAGDAF~Agfl~~l~~G~~ 369 (426)
T PLN02813 301 -SEESPESATRYL------S-HFCPLVSVTDGARGSYIGVKGEAVYIPPSPC---VPVDTCGAGDAYAAGILYGLLRGVS 369 (426)
T ss_pred -CCCCHHHHHHHH------H-cCCCEEEEEeCCCCeEEEECCEEEEeCCCCC---CcccCCChHHHHHHHHHHHHHcCCC
Confidence 234677777776 2 4678999999999999999988889988754 899999999999999999999999
Q ss_pred CHHHHHHHHHHHhhhhhhhccccC
Q 019448 311 PIEECVRAGCYTSHVIIQRSGCTY 334 (341)
Q Consensus 311 ~~~~a~~~a~~~Aa~~v~~~g~~~ 334 (341)
++++|+++|+++|+++|++.|+..
T Consensus 370 ~l~~al~~A~a~Aa~~v~~~Ga~~ 393 (426)
T PLN02813 370 DLRGMGELAARVAATVVGQQGTRL 393 (426)
T ss_pred CHHHHHHHHHHHHHHHHcccCCCc
Confidence 999999999999999999999943
|
|
| >PRK15074 inosine/guanosine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-48 Score=358.88 Aligned_cols=315 Identities=17% Similarity=0.290 Sum_probs=259.2
Q ss_pred CCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccc-cccHHHHHhccCC-ceEecCchHHHHHHHHHHHhcCCCc
Q 019448 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEK-HLPLYDEMASKYN-VEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 3 ~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
+..+|++||++++|+...++++||.+|++++|+..+.+.+ +.+.......... ....+||+++|+|+++++| + |.+
T Consensus 32 ~~~~v~g~GNaLvDi~~~v~d~fL~~~~l~kg~m~li~~e~~~~l~~~l~~~~~~~~~~~GGsaaNtA~~lArL-G-G~~ 109 (434)
T PRK15074 32 SRTYIVGIDQTLVDIEAKVDDEFLERYGLSKGHSLVIEDDVAEALYQELKQNNLITHEFAGGTIGNTLHNYSVL-A-DDR 109 (434)
T ss_pred CCCcEEEeCCceeeEEEeeCHHHHHHcCCCCCceEecCHHHHHHHHHHHhhccccccccCCCHHHHHHHHHHHc-C-CCC
Confidence 4568999999999999999999999999999999888764 6566665554332 3567999999999999983 2 489
Q ss_pred EEEEeeeecC-chhHHHHHHHH--hcCcceeeeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhc
Q 019448 81 TSYIGCIGKD-KFGEEMKKNSK--LAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVE 156 (341)
Q Consensus 81 v~~i~~vG~D-~~g~~i~~~l~--~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 156 (341)
+.|+|.||+| .+|+++++.|+ +.||+++++...+.+|+.++++++ +|+|+++.+.+++..+++++++. ..++
T Consensus 110 ~~fig~VGdDd~~G~~~~~~L~~~~~GVdt~~v~~~~~~TG~~~VlV~~dGeRt~~t~~GA~~~Lt~edld~----~~i~ 185 (434)
T PRK15074 110 SVLLGVMSSNIEIGSYAYRYLCNTSSRTDLNYLQGVDGPIGRCFTLISEDGERTFAISPGHMNQLRPESIPE----DVIA 185 (434)
T ss_pred eEEEEEeCCCHHHHHHHHHHhhhhhCCccCcceEEcCCCCEEEEEEECCCCCEEEEEecChhhcCChhHCCH----hHhc
Confidence 9999999999 79999999997 689999987655567999999987 89999999999888999988874 5689
Q ss_pred cceEEEEeccccc-----cCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHH-HhhcCCCcEEecCHHHHHHHhhhc
Q 019448 157 KAKYFYIAGFFLT-----VSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDAL-EKVLPYMDYIFGNETEARTFSKVQ 230 (341)
Q Consensus 157 ~~~~v~i~~~~~~-----~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~-~~~l~~~dvl~~n~~E~~~l~~~~ 230 (341)
+++++|++++.+. ..++.+..+++.|+++|+++++|++.+......++.+ ..+++++|++++|++|+..|++
T Consensus 186 ~a~ilyl~Gy~l~~~~~~~~~~a~~~al~~Ake~G~~VslD~s~~~~v~~~~~~~~e~l~~~vDILf~NeeEa~~LtG-- 263 (434)
T PRK15074 186 GASALVLTAYLVRCKPGEPMPEATMKAIEYAKKHNVPVVLTLGTKFVIEDNPQWWQEFLKEHVSILAMNEDEAEALTG-- 263 (434)
T ss_pred cCCEEEEeeeehhcccCCCcHHHHHHHHHHHHHcCCEEEEECcchhhccccHHHHHHHHHhcCCEEEcCHHHHHHHhC--
Confidence 9999999998753 2367888999999999999999998764322222222 3456799999999999999986
Q ss_pred CCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCe-------e----------------------------
Q 019448 231 GWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGK-------L---------------------------- 275 (341)
Q Consensus 231 ~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~-------~---------------------------- 275 (341)
.++++++++.+ .+ +++.||||+|++|++++..++ .
T Consensus 264 ---~~d~eea~~~L------~~-~~~~VVVTlG~~Ga~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (434)
T PRK15074 264 ---ESDPLLASDKA------LD-WVDLVLCTAGPIGLYMAGYTEDEAKRETQHPLLPGAIAEFNRYEFSRAMRKKDCQNP 333 (434)
T ss_pred ---CCCHHHHHHHH------Hc-CCCEEEEEECCCCEEEEecccccccCceeeeccccccccccchhcccchhccccccc
Confidence 35788888887 33 368999999999999964221 1
Q ss_pred ----EEEeceecCCCcccCCCCCchhhHHHHHHHHhcCC--------------------CHHHHHHHHHHHhhhhhhhcc
Q 019448 276 ----KKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK--------------------PIEECVRAGCYTSHVIIQRSG 331 (341)
Q Consensus 276 ----~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~--------------------~~~~a~~~a~~~Aa~~v~~~g 331 (341)
.++|++...+++++|||||||+|+|||+|+|++|+ ++++|+++|+++|+.++++.|
T Consensus 334 ~~~~~~~~~~~~~~~~~vDttGAGD~f~~gfl~~l~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~a~~vi~~~G 413 (434)
T PRK15074 334 LRVYSHIAPYMGGPEKIMNTNGAGDGALSALLHDITANSYHRSNVPNSSKHKRTYLTYSSLAQVCKYANRVSYEVLNQHS 413 (434)
T ss_pred cccccccCcccCCCCcceeCCCcHHHHHHHHHHHHHCCCcccccccccccccccccccCCHHHHHHHHHHHHHHHHhhcC
Confidence 26666632245899999999999999999999998 899999999999999999999
Q ss_pred ccCC
Q 019448 332 CTYP 335 (341)
Q Consensus 332 ~~~p 335 (341)
++++
T Consensus 414 ~~~~ 417 (434)
T PRK15074 414 PRLS 417 (434)
T ss_pred CCCC
Confidence 9444
|
|
| >PLN02379 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-48 Score=352.77 Aligned_cols=313 Identities=23% Similarity=0.327 Sum_probs=261.3
Q ss_pred CceEEEEc-CceeeeEeecChhHHHHhCCCCCceEecccc-cccHHHHHhc--------cCCceEecCchHHHHHHHHHH
Q 019448 4 EGILLGMG-NPLLDISSVVDDDFLNKYDIKLNNAILAEEK-HLPLYDEMAS--------KYNVEYIAGGATQNSIRVAQW 73 (341)
Q Consensus 4 ~~~v~~iG-~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--------~~~~~~~~GG~a~n~a~~l~~ 73 (341)
+++|++|| ++++|+...++++||.++++++|+..+.+.+ +.....+... ......++||++.|+++++++
T Consensus 19 ~~~v~g~g~nalvD~~~~v~~~~l~~~~~~kg~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a~~la~ 98 (367)
T PLN02379 19 PPLVLGLQPVALVDHVARVDWSLLDQIPGDRGGSIRVTIEELEHILREVNAHILPSPDDLSPIKTMAGGSVANTIRGLSA 98 (367)
T ss_pred CCcEEEEccccEEEEEEecCHHHHHHcCCCCcceeecCHHHHHHHHHHhhhcccccccccccceecCCCHHHHHHHHHHH
Confidence 56899999 9999999999999999999999999776654 4444444432 224678899999999999985
Q ss_pred HhcCCCcEEEEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchh
Q 019448 74 MLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENW 152 (341)
Q Consensus 74 l~~lg~~v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (341)
. ||.++.|+|.||+|.+|+++++.|++.||+++++...+++|+.++++++ +|+|++..+.++...++++++..
T Consensus 99 ~--LG~~~~~ig~VG~D~~G~~~~~~L~~~GI~~~~~~~~~~~Tg~~~v~v~~dgert~~~~lg~~~~l~~~~~~~---- 172 (367)
T PLN02379 99 G--FGVSTGIIGACGDDEQGKLFVSNMGFSGVDLSRLRAKKGPTAQCVCLVDALGNRTMRPCLSSAVKLQADELTK---- 172 (367)
T ss_pred h--cCCCEEEEEEeCCChhHHHHHHHHHHcCCCccCcccCCCCCceEEEEECCCCCccccCCccccccCChhHCCH----
Confidence 3 4699999999999999999999999999998887655668999988887 78998877767666777776653
Q ss_pred hhhccceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC--CCcEEecCHHHHHHHhhhc
Q 019448 153 ALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP--YMDYIFGNETEARTFSKVQ 230 (341)
Q Consensus 153 ~~l~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~E~~~l~~~~ 230 (341)
..+++++++|++ +. ..+++.+.++++.++++++++++|++.+.....+++.+.++++ ++|++++|++|+..+++..
T Consensus 173 ~~~~~~~~v~v~-~~-~~~~~~~~~~~~~A~~~g~~v~lD~s~~~~v~~~r~~l~~ll~~~~vDilf~Ne~Ea~~l~~~~ 250 (367)
T PLN02379 173 EDFKGSKWLVLR-YG-FYNLEVIEAAIRLAKQEGLSVSLDLASFEMVRNFRSPLLQLLESGKIDLCFANEDEARELLRGE 250 (367)
T ss_pred HHHhcCCEEEEE-cc-cCCHHHHHHHHHHHHHcCCEEEEeccchhhhhhhhHHHHHHhhcCCccEEEcCHHHHHHHhcCC
Confidence 568899999999 43 2567889999999999999999999876555556676777774 8999999999999998632
Q ss_pred CCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCC
Q 019448 231 GWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK 310 (341)
Q Consensus 231 ~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~ 310 (341)
. .++.+++.+.+ ..+++.+|||+|++|++++++++.+++++++. .+++|||||||+|+|||+++|++|+
T Consensus 251 ~--~~~~~~~~~~l-------~~~~~~vvvT~G~~Ga~~~~~~~~~~v~a~~~--~~vVDTtGAGDaFaagfl~gl~~G~ 319 (367)
T PLN02379 251 Q--ESDPEAALEFL-------AKYCNWAVVTLGSKGCIARHGKEVVRVPAIGE--TNAVDATGAGDLFASGFLYGLIKGL 319 (367)
T ss_pred C--CCCHHHHHHHH-------HhcCCEEEEEECCCCeEEEECCEEEEecCCCC--CCcccCCChhHHHHHHHHHHHHCCC
Confidence 2 23566666654 34578999999999999999888888887642 3789999999999999999999999
Q ss_pred CHHHHHHHHHHHhhhhhhhccccCC
Q 019448 311 PIEECVRAGCYTSHVIIQRSGCTYP 335 (341)
Q Consensus 311 ~~~~a~~~a~~~Aa~~v~~~g~~~p 335 (341)
++++|+++|+++|+.+|++.|++.+
T Consensus 320 ~l~~a~~~g~~aAa~vi~~~G~~~~ 344 (367)
T PLN02379 320 SLEECCKVGACSGGSVVRALGGEVT 344 (367)
T ss_pred CHHHHHHHHHHHHHHHHhccCCCCC
Confidence 9999999999999999999999754
|
|
| >cd01168 adenosine_kinase Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-47 Score=344.00 Aligned_cols=310 Identities=46% Similarity=0.751 Sum_probs=259.9
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i 84 (341)
.+|+++|.+++|++..+++..+..+++++|+.++...... .......+....+||+++|+|+++++ ||.++.++
T Consensus 2 ~~v~~vG~~~~D~~~~v~~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~GG~~~N~A~~la~---LG~~~~~i 75 (312)
T cd01168 2 YDVLGLGNALVDILAQVDDAFLEKLGLKKGDMILADMEEQ---EELLAKLPVKYIAGGSAANTIRGAAA---LGGSAAFI 75 (312)
T ss_pred ceEEEECCCeEEEEEecCHHHHHHcCCCCCceeecCHHHH---HHHHHhcCccccCCCHHHHHHHHHHH---hcCCeEEE
Confidence 5699999999999999997766667777777766632111 11111124578999999999999998 46999999
Q ss_pred eeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccceEEEE
Q 019448 85 GCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYI 163 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~i 163 (341)
|.+|+|.+|+.+++.|+++||+++++...+.+|+.++++++ +|+|+++.+.++...++++++.. ..+++++++|+
T Consensus 76 ~~vG~D~~g~~i~~~l~~~GV~~~~~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~----~~l~~~~~v~~ 151 (312)
T cd01168 76 GRVGDDKLGDFLLKDLRAAGVDTRYQVQPDGPTGTCAVLVTPDAERTMCTYLGAANELSPDDLDW----SLLAKAKYLYL 151 (312)
T ss_pred EEeccChhHHHHHHHHHHCCCccccccCCCCCceEEEEEEcCCCceeeecccchhhcCChhHCCH----HHHccCCEEEE
Confidence 99999999999999999999999988655678999988887 78999888888777888887753 56899999999
Q ss_pred eccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHHH
Q 019448 164 AGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALK 243 (341)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~~ 243 (341)
+++.+..+++.+..+++.+++.+.++++|+..+.+....++.+.++++++|++++|++|++.+++. +.++..++++.
T Consensus 152 ~~~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~~~d~l~~n~~E~~~l~~~---~~~~~~~~a~~ 228 (312)
T cd01168 152 EGYLLTVPPEAILLAAEHAKENGVKIALNLSAPFIVQRFKEALLELLPYVDILFGNEEEAEALAEA---ETTDDLEAALK 228 (312)
T ss_pred EEEecCCCHHHHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHHHHHHHhhCCEEEeCHHHHHHHhCC---CCCChHHHHHH
Confidence 997666667899999999999999999999765444445566788999999999999999999863 22456778888
Q ss_pred HhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHHHh
Q 019448 244 LSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTS 323 (341)
Q Consensus 244 l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~A 323 (341)
+ .+.+++.+|||+|++|++++++++.+++|++++ ++++|||||||+|+|||++++++|+++++|+++|+++|
T Consensus 229 l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~--~~vvDttGAGDaf~ag~l~~l~~g~~~~~a~~~a~~~A 300 (312)
T cd01168 229 L------LALRCRIVVITQGAKGAVVVEGGEVYPVPAIPV--EKIVDTNGAGDAFAGGFLYGLVQGEPLEECIRLGSYAA 300 (312)
T ss_pred H------HhcCCCEEEEecCCCCeEEEECCEEEeCCCCCC--CCcccCCchHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 8 667889999999999999998888888887651 38999999999999999999999999999999999999
Q ss_pred hhhhhhccccCC
Q 019448 324 HVIIQRSGCTYP 335 (341)
Q Consensus 324 a~~v~~~g~~~p 335 (341)
+++|++.|+..|
T Consensus 301 a~~v~~~G~~~~ 312 (312)
T cd01168 301 AEVIQQLGPRLP 312 (312)
T ss_pred HHHHhccCCCCC
Confidence 999999998643
|
The physiological function of AK is associated with the regulation of extracellular adenosine levels and the preservation of intracellular adenylate pools. Adenosine kinase is involved in the purine salvage pathway. |
| >PRK11142 ribokinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-46 Score=339.52 Aligned_cols=292 Identities=23% Similarity=0.351 Sum_probs=244.5
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i 84 (341)
++|+|+|++++|++..++ ++|.++......+....+||++.|+|++|++ +|.++.++
T Consensus 3 ~~i~~iG~~~~D~~~~~~--------------------~~p~~~~~~~~~~~~~~~GG~~~Nva~~la~---lG~~~~~~ 59 (306)
T PRK11142 3 GKLVVLGSINADHVLNLE--------------------SFPRPGETLTGRHYQVAFGGKGANQAVAAAR---LGADIAFI 59 (306)
T ss_pred CcEEEECCceeeEEEEeC--------------------CCCCCCCeeEeccceecCCCcHHHHHHHHHh---cCCcEEEE
Confidence 469999999999999887 5666666667777888999999999999997 46999999
Q ss_pred eeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccceEEE
Q 019448 85 GCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFY 162 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 162 (341)
|.+|+|.+|+.+++.|+++||+++++. .++.+|+.++++++ +|+|+++.+.++...+++++++. ....+.+++++|
T Consensus 60 ~~vG~D~~g~~i~~~L~~~gV~~~~i~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~v~ 137 (306)
T PRK11142 60 ACVGDDSIGESMRQQLAKDGIDTAPVSVIKGESTGVALIFVNDEGENSIGIHAGANAALTPALVEA--HRELIANADALL 137 (306)
T ss_pred EEECCChhHHHHHHHHHHcCCChhhEEEcCCCCCCEEEEEECCCCCEEEEEeCCccccCCHHHHHH--HHhhhccCCEEE
Confidence 999999999999999999999999875 55667888888776 68888887777766777766542 235578999999
Q ss_pred EeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHH
Q 019448 163 IAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL 242 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~ 242 (341)
+++ ..+.+.+..+++.+++++.++++|+.... .....+++++|++++|++|++.+++....+.++..++++
T Consensus 138 ~~~---~~~~~~~~~~~~~a~~~g~~v~~d~~~~~------~~~~~~~~~~dil~~n~~Ea~~l~g~~~~~~~~~~~~~~ 208 (306)
T PRK11142 138 MQL---ETPLETVLAAAKIAKQHGTKVILNPAPAR------ELPDELLALVDIITPNETEAEKLTGIRVEDDDDAAKAAQ 208 (306)
T ss_pred EeC---CCCHHHHHHHHHHHHHcCCEEEEECCCCc------ccCHHHHhhCCEEcCCHHHHHHHhCCCCCChHHHHHHHH
Confidence 975 34567888999999999999999996421 113468889999999999999998754333345666777
Q ss_pred HHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHHH
Q 019448 243 KLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYT 322 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~ 322 (341)
.+ ...+++.+|||+|++|++++++++.+++|++++ +++||+||||+|+|||++++++|+++++|+++|+++
T Consensus 209 ~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDt~GAGDaF~Agfi~~l~~g~~~~~al~~a~~~ 279 (306)
T PRK11142 209 VL------HQKGIETVLITLGSRGVWLSENGEGQRVPGFRV---QAVDTIAAGDTFNGALVTALLEGKPLPEAIRFAHAA 279 (306)
T ss_pred HH------HHhCCCeEEEEECCCcEEEEeCCcceeccCCCc---ccccCCCchhHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 77 566899999999999999998888888887654 799999999999999999999999999999999999
Q ss_pred hhhhhhhcccc--CCCCCC
Q 019448 323 SHVIIQRSGCT--YPEKPE 339 (341)
Q Consensus 323 Aa~~v~~~g~~--~p~~~~ 339 (341)
|+++|++.|+. +|+.++
T Consensus 280 Aa~~~~~~G~~~~~~~~~~ 298 (306)
T PRK11142 280 AAIAVTRKGAQPSIPWREE 298 (306)
T ss_pred HHHHcCCCcccccCCCHHH
Confidence 99999999984 576554
|
|
| >cd01174 ribokinase Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-45 Score=330.98 Aligned_cols=285 Identities=24% Similarity=0.369 Sum_probs=241.9
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
+|+|+|.+++|++..++ ++|..++..+......++||++.|+|.+|++ +|.++.++|
T Consensus 1 ~il~iG~~~~D~~~~~~--------------------~~~~~~~~~~~~~~~~~~GG~~~NvA~~l~~---lG~~~~~~~ 57 (292)
T cd01174 1 KVVVVGSINVDLVTRVD--------------------RLPKPGETVLGSSFETGPGGKGANQAVAAAR---LGARVAMIG 57 (292)
T ss_pred CEEEEeeceeEEEEEec--------------------CCCCCCCcEEeccceecCCCcHHHHHHHHHH---cCCceEEEE
Confidence 58999999999999876 5566666667777889999999999999997 569999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeee-ecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccceEEEE
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYY-EDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYI 163 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~-~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~i 163 (341)
.+|+|.+|+.+++.|+++||+++++ ..++.+|+.++++.+ +|+|+++.+.++...+++++++. ....+..++++++
T Consensus 58 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~ 135 (292)
T cd01174 58 AVGDDAFGDELLENLREEGIDVSYVEVVVGAPTGTAVITVDESGENRIVVVPGANGELTPADVDA--ALELIAAADVLLL 135 (292)
T ss_pred EEcCCccHHHHHHHHHHcCCCceEEEEcCCCCceeEEEEEcCCCceEEEEeCCCCCCCCHHHHHH--HHHhcccCCEEEE
Confidence 9999999999999999999999998 456678999888886 58888887777666666655542 3356889999999
Q ss_pred eccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHHH
Q 019448 164 AGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALK 243 (341)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~~ 243 (341)
++ ..+.+.+..+++.+++++.++++|+.... +..+++++++|++++|++|++.+++....+.++.+++++.
T Consensus 136 ~~---~~~~~~~~~~~~~a~~~g~~v~~D~~~~~------~~~~~~~~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~ 206 (292)
T cd01174 136 QL---EIPLETVLAALRAARRAGVTVILNPAPAR------PLPAELLALVDILVPNETEAALLTGIEVTDEEDAEKAARL 206 (292)
T ss_pred eC---CCCHHHHHHHHHHHHhcCCEEEEeCCCcC------cCcHHHHhhCCEEeeCHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 75 44678889999999999999999997532 1235788999999999999999987654444456677788
Q ss_pred HhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHHHh
Q 019448 244 LSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTS 323 (341)
Q Consensus 244 l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~A 323 (341)
+ .+.|++.+|+|+|++|++++++++.+++|++++ +++|++||||+|+|||++++++|+++++|+++|+++|
T Consensus 207 l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~---~~vdt~GaGD~F~ag~l~~l~~g~~~~~al~~a~~~A 277 (292)
T cd01174 207 L------LAKGVKNVIVTLGAKGALLASGGEVEHVPAFKV---KAVDTTGAGDTFIGALAAALARGLSLEEAIRFANAAA 277 (292)
T ss_pred H------HHcCCCEEEEEeCCCceEEEeCCceEEecCCCc---ccCCCCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 7 667899999999999999998888888887654 8899999999999999999999999999999999999
Q ss_pred hhhhhhcccc
Q 019448 324 HVIIQRSGCT 333 (341)
Q Consensus 324 a~~v~~~g~~ 333 (341)
+.++++.|+.
T Consensus 278 a~~~~~~G~~ 287 (292)
T cd01174 278 ALSVTRPGAQ 287 (292)
T ss_pred HHHhcCcCCC
Confidence 9999999994
|
This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution. |
| >PTZ00292 ribokinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-46 Score=338.30 Aligned_cols=300 Identities=22% Similarity=0.310 Sum_probs=245.7
Q ss_pred CCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEE
Q 019448 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATS 82 (341)
Q Consensus 3 ~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~ 82 (341)
.+++|+|+|.+++|+++.++ ++|.+++..+.......+||.+.|+|++|++ ||.++.
T Consensus 14 ~~~~vlviG~~~vD~~~~~~--------------------~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~---lG~~~~ 70 (326)
T PTZ00292 14 AEPDVVVVGSSNTDLIGYVD--------------------RMPQVGETLHGTSFHKGFGGKGANQAVMASK---LGAKVA 70 (326)
T ss_pred CCCCEEEEccceeeEEEecC--------------------CCCCCCCceeecCceeCCCCcHHHHHHHHHH---cCCCeE
Confidence 35689999999999999887 5566666666677788999999999999998 569999
Q ss_pred EEeeeecCchhHHHHHHHHhcCcceeee-ecCCCCceeEEEEEe--CCccceeecccccccCCcccCCCcchhhhhcc-c
Q 019448 83 YIGCIGKDKFGEEMKKNSKLAGVNVHYY-EDESASTGTCAVCVV--GGERSLVANLSAANCYKSEHLKKPENWALVEK-A 158 (341)
Q Consensus 83 ~i~~vG~D~~g~~i~~~l~~~gi~~~~~-~~~~~~t~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~ 158 (341)
++|.+|+|.+|+.+++.|++.||+++++ ...+.+|+.++++++ +|+|+++.+.++...++++.++. .+..+.. +
T Consensus 71 ~is~vG~D~~g~~i~~~l~~~GI~~~~~~~~~~~~t~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~--~~~~i~~~~ 148 (326)
T PTZ00292 71 MVGMVGTDGFGSDTIKNFKRNGVNTSFVSRTENSSTGLAMIFVDTKTGNNEIVIIPGANNALTPQMVDA--QTDNIQNIC 148 (326)
T ss_pred EEEEECCChhHHHHHHHHHHcCCChhhEEEcCCCCCcEEEEEEeCCCCceEEEEeCCccccCCHHHHHH--HHHHhhhhC
Confidence 9999999999999999999999999998 456678998888876 57888887777766777766643 2344667 8
Q ss_pred eEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHH
Q 019448 159 KYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVE 238 (341)
Q Consensus 159 ~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~ 238 (341)
+++++++ ..+.+...++++.+++++.++++|++... .....+.+.++++++|++++|++|++.+++....+.++..
T Consensus 149 ~~~~~~~---~~~~~~~~~~~~~a~~~g~~v~~D~~~~~-~~~~~~~~~~~l~~~dii~~n~~E~~~l~g~~~~~~~~~~ 224 (326)
T PTZ00292 149 KYLICQN---EIPLETTLDALKEAKERGCYTVFNPAPAP-KLAEVEIIKPFLKYVSLFCVNEVEAALITGMEVTDTESAF 224 (326)
T ss_pred CEEEECC---CCCHHHHHHHHHHHHHcCCEEEEECCCCc-cccccccHHHHHhcCCEEcCCHHHHHHHhCCCCCChhHHH
Confidence 9999864 34667888899999999999999997432 1111245778999999999999999999874332334455
Q ss_pred HHHHHHhcCCccccCCccEEEEEeCCCceEEEECCe-eEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHH
Q 019448 239 EIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGK-LKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVR 317 (341)
Q Consensus 239 ~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~-~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~ 317 (341)
++++.+ ...+++.+|||+|++|++++++++ .+++|++++ +++||+||||+|+|||++++++|+++++|++
T Consensus 225 ~~~~~l------~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~---~vvDttGAGDaF~ag~l~~l~~g~~~~~al~ 295 (326)
T PTZ00292 225 KASKEL------QQLGVENVIITLGANGCLIVEKENEPVHVPGKRV---KAVDTTGAGDCFVGSMAYFMSRGKDLKESCK 295 (326)
T ss_pred HHHHHH------HHcCCCeEEEEeCCCcEEEEeCCCceEEccCCcc---ccCCCcchHHHHHHHHHHHHHCCCCHHHHHH
Confidence 666666 566889999999999999988764 478887654 8999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhcccc--CCCCCCC
Q 019448 318 AGCYTSHVIIQRSGCT--YPEKPEF 340 (341)
Q Consensus 318 ~a~~~Aa~~v~~~g~~--~p~~~~~ 340 (341)
+|+++|+++++++|+. +|+.+++
T Consensus 296 ~a~a~Aa~~v~~~G~~~~~~~~~~~ 320 (326)
T PTZ00292 296 RANRIAAISVTRHGTQSSYPHPSEL 320 (326)
T ss_pred HHHHHHHHHcCCCCccccCCCHHHH
Confidence 9999999999999995 5766554
|
|
| >PLN02341 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-43 Score=334.87 Aligned_cols=300 Identities=18% Similarity=0.201 Sum_probs=236.4
Q ss_pred CCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhc-----------cCCceEecCchHHHHHHHH
Q 019448 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMAS-----------KYNVEYIAGGATQNSIRVA 71 (341)
Q Consensus 3 ~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~GG~a~n~a~~l 71 (341)
++.+|+++|++++|+++.++ ++|..++... .......+|| ++|+|++|
T Consensus 71 ~~~~vl~lG~~~vD~i~~V~--------------------~lP~~~~~~~~~~~~~~~~~~~~~~~~~~GG-~~NvAvaL 129 (470)
T PLN02341 71 KEIDVATLGNLCVDIVLPVP--------------------ELPPPSREERKAYMEELAASPPDKKSWEAGG-NCNFAIAA 129 (470)
T ss_pred ccccEEEECCcceeEEEecC--------------------CCCCCCHHHHHHHHHhhcccccccceecCCh-HHHHHHHH
Confidence 44689999999999999987 5565443211 1334556788 68999999
Q ss_pred HHHhcCCCcEEEEeeeecCchhHHHHHHHHhcCcceeeeecC---------CCCceeEEEEEe-CCccceeecccccccC
Q 019448 72 QWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDE---------SASTGTCAVCVV-GGERSLVANLSAANCY 141 (341)
Q Consensus 72 ~~l~~lg~~v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~---------~~~t~~~~~~~~-~g~~~~~~~~~~~~~~ 141 (341)
++ ||.++.++|.||+|.+|+++++.|++.||++.++... ..+|+.++++++ +|++.++...+.....
T Consensus 130 ar---LG~~v~lig~VG~D~~G~~i~~~L~~~GVd~~~v~~~~~~~~~~~~~~~T~~~~vlvd~~ger~~~~~~~~~~~~ 206 (470)
T PLN02341 130 AR---LGLRCSTIGHVGDEIYGKFLLDVLAEEGISVVGLIEGTDAGDSSSASYETLLCWVLVDPLQRHGFCSRADFGPEP 206 (470)
T ss_pred HH---cCCCeEEEEEecCcHHHHHHHHHHHHcCCeeeEEEecCccccccccCCCceeEEEEEcCCCCceeeecccccccc
Confidence 98 5699999999999999999999999999999987532 246888888887 6777654433322222
Q ss_pred CcccCCC--cchhhhhccceEEEEecccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchh---HH--HHHHHHHHhhcCCC
Q 019448 142 KSEHLKK--PENWALVEKAKYFYIAGFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPF---IC--EFFKDALEKVLPYM 213 (341)
Q Consensus 142 ~~~~~~~--~~~~~~l~~~~~v~i~~~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~---~~--~~~~~~~~~~l~~~ 213 (341)
..+++.. ......++++|++|++++.+ ..+.+.+..+++.+++.+.++++|+.... |. +...+.++++++++
T Consensus 207 ~~~~~~~l~~~~~~~l~~adiv~lsg~~~~~~~~~~~~~~~~~Ak~~g~~V~~Dp~~~~~~~~~~~~~~~~~l~~~L~~~ 286 (470)
T PLN02341 207 AFSWISKLSAEAKMAIRQSKALFCNGYVFDELSPSAIASAVDYAIDVGTAVFFDPGPRGKSLLVGTPDERRALEHLLRMS 286 (470)
T ss_pred chhhhhcccHHHHhhhhcCCEEEEeceeCCcCCHHHHHHHHHHHHHcCCEEEEeCCCcccccccChHHHHHHHHHHHhhC
Confidence 2222211 12235688999999998764 46788899999999999999999996431 11 11334578899999
Q ss_pred cEEecCHHHHHHHhhhcCCCCCCHHHHHHHHhcCCccccCC--ccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCC
Q 019448 214 DYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIR--KRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDT 291 (341)
Q Consensus 214 dvl~~n~~E~~~l~~~~~~~~~d~~~~~~~l~~~~~~~~~~--~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~ 291 (341)
|++++|++|++.+++. ++++++++.+ ...+ .+.||||+|++|++++++++.+++|++++ +++||
T Consensus 287 Dil~~Ne~Ea~~l~g~-----~~~~~a~~~l------~~~g~~~k~VVVTlG~~Ga~~~~~~~~~~vpa~~v---~vVDT 352 (470)
T PLN02341 287 DVLLLTSEEAEALTGI-----RNPILAGQEL------LRPGIRTKWVVVKMGSKGSILVTRSSVSCAPAFKV---NVVDT 352 (470)
T ss_pred CEEEecHHHHHHHhCC-----CCHHHHHHHH------HhcCCCCCEEEEeeCCCCeEEEECCeeEEeCCCCc---CCCCC
Confidence 9999999999999873 5677888887 4444 57999999999999999988888887755 89999
Q ss_pred CCCchhhHHHHHHHHhcCCCHHHHHHHHHHHhhhhhhhccc--cCCCCCCC
Q 019448 292 NGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGC--TYPEKPEF 340 (341)
Q Consensus 292 tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~Aa~~v~~~g~--~~p~~~~~ 340 (341)
|||||+|+|||++++++|+++++|+++|+++|+++|++.|+ .+|+.+|+
T Consensus 353 tGAGDaF~Agfl~gll~G~~l~eal~~A~a~aA~~v~~~Ga~~~~p~~~ev 403 (470)
T PLN02341 353 VGCGDSFAAAIALGYIHNLPLVNTLTLANAVGAATAMGCGAGRNVATLEKV 403 (470)
T ss_pred cCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCcCCCCCCCCHHHH
Confidence 99999999999999999999999999999999999999997 57776554
|
|
| >cd01944 YegV_kinase_like YegV-like sugar kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-43 Score=316.34 Aligned_cols=284 Identities=21% Similarity=0.318 Sum_probs=229.1
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
+|+++|++++|++..++ ++|..+...+.......+|| +.|+|+++++ ||.++.++|
T Consensus 1 ~i~~iG~~~~D~i~~~~--------------------~~~~~~~~~~~~~~~~~~GG-~~Nva~~l~~---lG~~~~~~~ 56 (289)
T cd01944 1 KVLVIGAAVVDIVLDVD--------------------KLPASGGDIEAKSKSYVIGG-GFNVMVAASR---LGIPTVNAG 56 (289)
T ss_pred CeEEEcceeEEEEeecc--------------------cCCCCCCccccceeeeccCc-HHHHHHHHHH---cCCCeEEEE
Confidence 58999999999999887 56777777777778899999 9999999997 469999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccceEEEEe
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIA 164 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~i~ 164 (341)
.+|+|.+|+.+++.|+++||+++++...+..|+.++++++ +|+|+++.+.++...+++++++. ..+.+++++|++
T Consensus 57 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 132 (289)
T cd01944 57 PLGNGNWADQIRQAMRDEGIEILLPPRGGDDGGCLVALVEPDGERSFISISGAEQDWSTEWFAT----LTVAPYDYVYLS 132 (289)
T ss_pred EecCChHHHHHHHHHHHcCCccccccccCCCCeEEEEEEcCCCceEEEEeCCccCCCCHHHhcc----ccCCCCCEEEEe
Confidence 9999999999999999999999988766667777766666 68998888777766777776654 236789999999
Q ss_pred cccccc---CHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHH
Q 019448 165 GFFLTV---SPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIA 241 (341)
Q Consensus 165 ~~~~~~---~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~ 241 (341)
++.+.. +.+.+..+++.++ .+.++++|+....+ ....+.++++++++|++++|++|++.+++.. ..+...++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~D~~~~~~-~~~~~~~~~~l~~~d~~~~n~~E~~~l~g~~---~~~~~~~~ 207 (289)
T cd01944 133 GYTLASENASKVILLEWLEALP-AGTTLVFDPGPRIS-DIPDTILQALMAKRPIWSCNREEAAIFAERG---DPAAEASA 207 (289)
T ss_pred CccccCcchhHHHHHHHHHhcc-CCCEEEEcCccccc-ccCHHHHHHHHhcCCEEccCHHHHHHHhCCC---CcchHHHH
Confidence 876422 2455666666544 56889999964321 1123457889999999999999999998742 12223335
Q ss_pred HHHhcCCccccCCccEEEEEeCCCceEEEE-CCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHH
Q 019448 242 LKLSQWPKASEIRKRTAVITQGADPVVVAQ-DGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGC 320 (341)
Q Consensus 242 ~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~-~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~ 320 (341)
+.+ .+.+++.+|||+|++|++++. ++..+++|++++ +++|||||||+|+|||++++++|+++++|+++|+
T Consensus 208 ~~~------~~~~~~~vvvt~G~~Ga~~~~~~~~~~~~~~~~~---~vvDt~GAGDaf~ag~l~~~~~g~~~~~a~~~a~ 278 (289)
T cd01944 208 LRI------YAKTAAPVVVRLGSNGAWIRLPDGNTHIIPGFKV---KAVDTIGAGDTHAGGMLAGLAKGMSLADAVLLAN 278 (289)
T ss_pred HHH------HhccCCeEEEEECCCcEEEEecCCCeEEecCCCC---CCccCCCchHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 555 456778999999999999998 455677776654 8899999999999999999999999999999999
Q ss_pred HHhhhhhhhcc
Q 019448 321 YTSHVIIQRSG 331 (341)
Q Consensus 321 ~~Aa~~v~~~g 331 (341)
++|+++|++.|
T Consensus 279 a~aa~~~~~~G 289 (289)
T cd01944 279 AAAAIVVTRSG 289 (289)
T ss_pred HHHHhhhccCC
Confidence 99999999987
|
Found only in bacteria, YegV-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. |
| >PRK09850 pseudouridine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-43 Score=320.72 Aligned_cols=294 Identities=18% Similarity=0.235 Sum_probs=228.8
Q ss_pred CCCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 1 ~~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
|..+++|+|+|.+.+|++...+ . |..............+||++.|+|.++++ +|.+
T Consensus 1 ~~~~~~i~~iG~~~vD~~~~~~--------------------~-~~~~~~~~~~~~~~~~GG~~~NvA~~l~~---lG~~ 56 (313)
T PRK09850 1 MREKDYVVIIGSANIDVAGYSH--------------------E-SLNYADSNPGKIKFTPGGVGRNIAQNLAL---LGNK 56 (313)
T ss_pred CCCCCcEEEECcEEEeeeccCC--------------------C-cCcCCCCCceEEEEeCCcHHHHHHHHHHH---cCCC
Confidence 7778899999999999998754 1 22222223345678899999999999998 4699
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeee-ecCCCCceeEEEEEe-CCccceeec-ccccccCCcccCCCcchhhhhcc
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYY-EDESASTGTCAVCVV-GGERSLVAN-LSAANCYKSEHLKKPENWALVEK 157 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~-~~~~~~t~~~~~~~~-~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~ 157 (341)
+.++|.||+|.+|+.+++.|++.||+++++ +.++.+|+.++++++ +|+|.+... .++...+.++.+.. ..+.+++
T Consensus 57 ~~~ig~vG~D~~g~~i~~~l~~~gVd~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 134 (313)
T PRK09850 57 AWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENTSSYLSLLDNTGEMLVAINDMNISNAITAEYLAQ--HREFIQR 134 (313)
T ss_pred eEEEEEecCchhHHHHHHHHHHcCCCchheeecCCCCceEEEEEecCCCCEEEEecCchHhhhCCHHHHHH--HHHHHhc
Confidence 999999999999999999999999999986 456667999988887 677766543 23333444444331 2245788
Q ss_pred ceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCH
Q 019448 158 AKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDV 237 (341)
Q Consensus 158 ~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~ 237 (341)
++++++++ ..+.+.+..+++.+ .++++++|+... |. .+.++++++++|++++|++|+..+++....+.++.
T Consensus 135 ~~~v~~~~---~~~~~~~~~~~~~~--~g~~v~~D~~~~-~~---~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~ 205 (313)
T PRK09850 135 AKVIVADC---NISEEALAWILDNA--ANVPVFVDPVSA-WK---CVKVRDRLNQIHTLKPNRLEAETLSGIALSGREDV 205 (313)
T ss_pred CCEEEEeC---CCCHHHHHHHHHhc--cCCCEEEEcCCH-HH---HHHHHhhhccceEEccCHHHHHHHhCCCCCCHHHH
Confidence 99999975 34566677676643 578999999753 21 23467788999999999999999987543334556
Q ss_pred HHHHHHHhcCCccccCCccEEEEEeCCCceEEEEC-CeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHH
Q 019448 238 EEIALKLSQWPKASEIRKRTAVITQGADPVVVAQD-GKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECV 316 (341)
Q Consensus 238 ~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~-~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~ 316 (341)
+++++.+ .+.|++.+|||+|++|++++++ +...++|+++ ++++|||||||+|+|||+++|++|+++++|+
T Consensus 206 ~~~~~~l------~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~~---~~vvDttGAGDaF~agfi~~l~~g~~~~eal 276 (313)
T PRK09850 206 AKVAAWF------HQHGLNRLVLSMGGDGVYYSDISGESGWSAPIK---TNVINVTGAGDAMMAGLASCWVDGMPFAESV 276 (313)
T ss_pred HHHHHHH------HHcCCCEEEEEeCCceEEEEcCCCCeEecCCCC---cccccCCCcHHHHHHHHHHHHHcCCCHHHHH
Confidence 7777777 5678899999999999999974 3455667654 4899999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhccc--cCCCCC
Q 019448 317 RAGCYTSHVIIQRSGC--TYPEKP 338 (341)
Q Consensus 317 ~~a~~~Aa~~v~~~g~--~~p~~~ 338 (341)
++|+++|++++++.+. ..|+.+
T Consensus 277 ~~a~a~aa~~~~~~~~~~~~~~~~ 300 (313)
T PRK09850 277 RFAQGCSSMALSCEYTNNPDLSIA 300 (313)
T ss_pred HHHHHHHHHHhcCCCCCCcccCHH
Confidence 9999999999999988 444443
|
|
| >cd01945 ribokinase_group_B Ribokinase-like subgroup B | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-43 Score=314.44 Aligned_cols=277 Identities=23% Similarity=0.334 Sum_probs=227.7
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
+|+++|++++|++..++ ++|..++..+.......+||.+.|+|.+|++ +|.++.++|
T Consensus 1 ~i~~iG~~~iD~~~~~~--------------------~~p~~~~~~~~~~~~~~~GG~~~NvA~~l~~---lG~~~~~~~ 57 (284)
T cd01945 1 RVLGVGLAVLDLIYLVA--------------------SFPGGDGKIVATDYAVIGGGNAANAAVAVAR---LGGQARLIG 57 (284)
T ss_pred CEEEECcceeEEEEEec--------------------cCCCCCCeEEEeEEEEecCCHHHHHHHHHHH---cCCCeEEEE
Confidence 58999999999999886 5666666667778889999999999999997 469999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeeeec-CCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccceEEEEe
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYYED-ESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIA 164 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~-~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~i~ 164 (341)
.+|+|.+|+.+++.|++.||+++++.. .+.+|+.+++...++++....+.+....+.+++++. ..+.+++++|++
T Consensus 58 ~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~i~ 133 (284)
T cd01945 58 VVGDDAIGRLILAELAAEGVDTSFIVVAPGARSPISSITDITGDRATISITAIDTQAAPDSLPD----AILGGADAVLVD 133 (284)
T ss_pred EecCchHHHHHHHHHHHcCCCccceeecCCCCCccEEEEccCCCceEEEecCCCCCCCcccCCH----HHhCcCCEEEEc
Confidence 999999999999999999999999864 445677765533467777766666666666666653 447999999998
Q ss_pred ccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHHHH
Q 019448 165 GFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKL 244 (341)
Q Consensus 165 ~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~~l 244 (341)
+. .++...++++.+++++.++.+|+....+ .+ ++++++++|++++|++|++.+++. .+. ++++.+
T Consensus 134 ~~----~~~~~~~~~~~~~~~g~~v~~~~~~~~~----~~-~~~~~~~~dil~~n~~e~~~l~~~-----~~~-~~~~~l 198 (284)
T cd01945 134 GR----QPEAALHLAQEARARGIPIPLDLDGGGL----RV-LEELLPLADHAICSENFLRPNTGS-----ADD-EALELL 198 (284)
T ss_pred CC----CHHHHHHHHHHHHHcCCCeeEeccCCcc----cc-hHHHhccCCEEEeChhHHhhhcCC-----CHH-HHHHHH
Confidence 74 3567888999999999865554432221 22 668889999999999999998763 222 666666
Q ss_pred hcCCccccCCccEEEEEeCCCceEEEE-CCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHHHh
Q 019448 245 SQWPKASEIRKRTAVITQGADPVVVAQ-DGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTS 323 (341)
Q Consensus 245 ~~~~~~~~~~~~~vvvt~G~~G~~~~~-~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~A 323 (341)
.+.+++.+|||+|++|+++++ +++.+++|++++ +++||+||||+|+|||+++|++|+++++|+++|+++|
T Consensus 199 ------~~~~~~~vivt~G~~G~~~~~~~~~~~~~~~~~~---~vvDt~GAGDaf~ag~l~~l~~g~~~~~al~~a~~~A 269 (284)
T cd01945 199 ------ASLGIPFVAVTLGEAGCLWLERDGELFHVPAFPV---EVVDTTGAGDVFHGAFAHALAEGMPLREALRFASAAA 269 (284)
T ss_pred ------HhcCCcEEEEEECCCCeEEEcCCCCEEecCCCcc---ccccCCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 567889999999999999998 677888887654 8999999999999999999999999999999999999
Q ss_pred hhhhhhcccc
Q 019448 324 HVIIQRSGCT 333 (341)
Q Consensus 324 a~~v~~~g~~ 333 (341)
+++|++.|+.
T Consensus 270 a~~~~~~G~~ 279 (284)
T cd01945 270 ALKCRGLGGR 279 (284)
T ss_pred HHHHhccCCc
Confidence 9999999984
|
Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. . |
| >PLN02967 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-43 Score=330.78 Aligned_cols=313 Identities=15% Similarity=0.175 Sum_probs=235.2
Q ss_pred CceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEE
Q 019448 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~ 83 (341)
.+.|+|||++++|++..... -+.++....+....+..+++......+||+++|+|++|++ ||.++.|
T Consensus 196 ~~~V~~iGe~l~D~~p~g~~----------~~~l~~~~~~~~~~~~~s~~~~~~~~~GGa~aNVAvaLAR---LG~~v~f 262 (581)
T PLN02967 196 PPLVCCFGAAQHAFVPSGRP----------ANRLLDYEIHERMKDAFWAPEKFVRAPGGSAGGVAIALAS---LGGKVAF 262 (581)
T ss_pred CCeEEEECchhheecccCcc----------chhhhhccccccccccccCccceeeecCcHHHHHHHHHHH---CCCCEEE
Confidence 45799999999999774321 0000000001111122445677888999999999999998 5699999
Q ss_pred EeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCcccee-ecccccccCCcccCCCcchhhhhccceE
Q 019448 84 IGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLV-ANLSAANCYKSEHLKKPENWALVEKAKY 160 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 160 (341)
+|.||+|.+|+++++.|++.||+++++. ..+..|+.+++.++ +|+++++ ...+++..+.++++.. ..+.++++
T Consensus 263 Ig~VGdD~~G~~ll~~L~~~GVDts~v~~~~~~~Tgla~V~vd~~Gerr~~~~~~gAd~~L~~~di~~----~~l~~A~i 338 (581)
T PLN02967 263 MGKLGDDDYGQAMLYYLNVNKVQTRSVCIDGKRATAVSTMKIAKRGRLKTTCVKPCAEDSLSKSEINI----DVLKEAKM 338 (581)
T ss_pred EEEeCCCHHHHHHHHHHHHcCCcccceEecCCCCCcEEEEEECCCCceEEEEecCChhhhCChhhcCH----hHhcCCCE
Confidence 9999999999999999999999999885 45667999988886 6777664 4567777788777763 56789999
Q ss_pred EEEecccc--ccCHHHHHHHHHHHHhCCCeEEEeCC--chhHH--HHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCC
Q 019448 161 FYIAGFFL--TVSPDSIQLVAEHAAANNKVFMMNLS--APFIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWET 234 (341)
Q Consensus 161 v~i~~~~~--~~~~~~~~~~~~~a~~~~~~v~~d~~--~~~~~--~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~ 234 (341)
+|++++.+ ..+.+.+..+++.++++|+++++|+. .+.|. ....+.+.++++++|+|++|++|+..|++......
T Consensus 339 ~hfgg~~ll~e~~~~all~alk~Ak~~Gv~VsFDpNlR~~lw~~~e~~~e~i~elL~~aDILk~NeeEl~~LtG~~~~~e 418 (581)
T PLN02967 339 FYFNTHSLLDPTMRSTTLRAIKISKKLGGVIFYDLNLPLPLWSSSEETKSFIQEAWNLADIIEVTKQELEFLCGIEPTEE 418 (581)
T ss_pred EEEeCchhcccchHHHHHHHHHHHHHCCCEEEEECCCCcccccchHHHHHHHHHHHHhCCEEEECHHHHHHHhCCCcccc
Confidence 99998753 22347889999999999999888874 34453 23456688999999999999999999987421000
Q ss_pred C------------CHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCee---EEEeceecCCCcccCCCCCchhhH
Q 019448 235 D------------DVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKL---KKFPVIVLPKDKLVDTNGAGDAFV 299 (341)
Q Consensus 235 ~------------d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~---~~~~~~~~~~~~~vd~tGAGDaf~ 299 (341)
. ...+.+..+ +..+++.||||+|++|+++++++.. ..++++++ .+.+||||||||+|+
T Consensus 419 ~~~~~~~~~~~~~~~~e~a~~l------~~~g~k~VVVTlG~~Ga~~~~~~~~~~v~~~~a~~V-~V~vVDTTGAGDAF~ 491 (581)
T PLN02967 419 FDTKDNDKSKFVHYSPEVVAPL------WHENLKVLFVTNGTSKIHYYTKEHNGAVHGMEDAPI-TPFTSDMSASGDGIV 491 (581)
T ss_pred ccccccchhccccchHHHHHHH------HhCCCCEEEEEECccceEEEECCCceeEeeccCCCC-CCCCCCCCchhHHHH
Confidence 0 012334455 4557899999999999999987542 33344444 223699999999999
Q ss_pred HHHHHHHhcC-------CCHHHHHHHHHHHhhhhhhhccc--cCCCCCCC
Q 019448 300 GGFLSQLVQE-------KPIEECVRAGCYTSHVIIQRSGC--TYPEKPEF 340 (341)
Q Consensus 300 ag~~~~l~~g-------~~~~~a~~~a~~~Aa~~v~~~g~--~~p~~~~~ 340 (341)
|||+++|+++ +++++|+++|+++||++++..|+ .+|+.+++
T Consensus 492 AGfL~~Ll~g~~~~~g~~~LeeaLrfAnAaAAL~vt~~GA~~glPt~~eV 541 (581)
T PLN02967 492 AGLMRMLTVQPHLITDKGYLEKTIKYAIDCGVIDQWLLARTRGFPPKEDM 541 (581)
T ss_pred HHHHHHHHhccCcccccccHHHHHHHHHHHHHHHhccCCCccCCCCHHHH
Confidence 9999999984 67999999999999999999999 77776543
|
|
| >PLN02323 probable fructokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=316.42 Aligned_cols=294 Identities=23% Similarity=0.310 Sum_probs=232.9
Q ss_pred CCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEE
Q 019448 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATS 82 (341)
Q Consensus 3 ~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~ 82 (341)
++.+|+++|++++|++..++ +.|. ........++||++.|+|.++++ +|.++.
T Consensus 9 ~~~~i~~iG~~~vD~~~~~~--------------------~~~~----~~~~~~~~~~GG~~~NvA~~la~---LG~~~~ 61 (330)
T PLN02323 9 ESSLVVCFGEMLIDFVPTVS--------------------GVSL----AEAPAFKKAPGGAPANVAVGISR---LGGSSA 61 (330)
T ss_pred CCCcEEEechhhhhhccCCC--------------------CCCc----ccccceeecCCChHHHHHHHHHh---cCCcee
Confidence 46789999999999998665 2232 12345578999999999999997 469999
Q ss_pred EEeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecc--cccccCCcccCCCcchhhhhccc
Q 019448 83 YIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKKPENWALVEKA 158 (341)
Q Consensus 83 ~i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~ 158 (341)
++|.+|+|.+|+++++.|++.||+++++. .++.+|+.+++..+ +|+|+++.+. +++..+++++++. ..+..+
T Consensus 62 ~i~~vG~D~~g~~i~~~L~~~GI~~~~v~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 137 (330)
T PLN02323 62 FIGKVGDDEFGHMLADILKKNGVNNEGVRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLRESELDL----DLIRKA 137 (330)
T ss_pred EEEEecCChhHHHHHHHHHHcCCCCcceEEcCCCCceEEEEEECCCCceeEEeecCCchhccCChHHCCh----HHHccC
Confidence 99999999999999999999999999875 45567888877775 7888877653 4444677776653 457889
Q ss_pred eEEEEecccccc--CHHHHHHHHHHHHhCCCeEEEeCCch--hHH--HHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCC
Q 019448 159 KYFYIAGFFLTV--SPDSIQLVAEHAAANNKVFMMNLSAP--FIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGW 232 (341)
Q Consensus 159 ~~v~i~~~~~~~--~~~~~~~~~~~a~~~~~~v~~d~~~~--~~~--~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~ 232 (341)
++++++++.... ....+..+++.+++.|.++++|+... .|. ...++.+.++++++|++++|++|+..+++..
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~E~~~l~g~~-- 215 (330)
T PLN02323 138 KIFHYGSISLITEPCRSAHLAAMKIAKEAGALLSYDPNLRLPLWPSAEAAREGIMSIWDEADIIKVSDEEVEFLTGGD-- 215 (330)
T ss_pred CEEEEechhccCchHHHHHHHHHHHHHHcCCEEEEcCCCChhhccCHHHHHHHHHHHHHhCCEEEcCHHHHHHHhCCC--
Confidence 999988765321 22556788899999999999999632 221 2245557788999999999999999998642
Q ss_pred CCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCC-
Q 019448 233 ETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKP- 311 (341)
Q Consensus 233 ~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~- 311 (341)
..+..++. ++ +..|++.+|||+|++|++++++++.+++|++++ +++|||||||+|+|||++++++|++
T Consensus 216 -~~~~~~~~-~~------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaf~Agfl~~l~~g~~~ 284 (330)
T PLN02323 216 -DPDDDTVV-KL------WHPNLKLLLVTEGEEGCRYYTKDFKGRVEGFKV---KAVDTTGAGDAFVGGLLSQLAKDLSL 284 (330)
T ss_pred -CccHHHHH-HH------HhcCCCEEEEecCCCceEEEeCCCceEeCCccC---CCCCCCCcHHHHHHHHHHHHHcCCcc
Confidence 12233333 33 345789999999999999998887778887755 8899999999999999999999986
Q ss_pred ------HHHHHHHHHHHhhhhhhhccc--cCCCCCCC
Q 019448 312 ------IEECVRAGCYTSHVIIQRSGC--TYPEKPEF 340 (341)
Q Consensus 312 ------~~~a~~~a~~~Aa~~v~~~g~--~~p~~~~~ 340 (341)
+++|+++|+++|+++|++.|+ .+|+.+|+
T Consensus 285 ~~~~~~l~~al~~a~a~Aa~~v~~~g~~~~~~~~~~v 321 (330)
T PLN02323 285 LEDEERLREALRFANACGAITTTERGAIPALPTKEAV 321 (330)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhccCCccCCCCHHHH
Confidence 899999999999999999999 56766553
|
|
| >COG0524 RbsK Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-43 Score=315.45 Aligned_cols=295 Identities=29% Similarity=0.405 Sum_probs=242.7
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
+|+++|++++|++....+ .+|..++..........+||++.|+|+++++ +|.++.|+|
T Consensus 1 ~v~~iG~~~vD~~~~~~~-------------------~~~~~~~~~~~~~~~~~~GG~~~N~A~~~a~---lG~~~~~~~ 58 (311)
T COG0524 1 DVVVIGEANVDLIAQVVD-------------------RLPEPGETVLGDFFKVAGGGKGANVAVALAR---LGAKVALIG 58 (311)
T ss_pred CEEEECchhhheehhhcc-------------------CCCCCcccccccceeecCCchHHHHHHHHHH---cCCceEEEE
Confidence 489999999999996332 4555555555555788999999999999997 469999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeeeec-CCCCceeEEEEEe-CCccceeeccc-ccccCCcccCCCcchhhhhccceEEE
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYYED-ESASTGTCAVCVV-GGERSLVANLS-AANCYKSEHLKKPENWALVEKAKYFY 162 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~-~~~~t~~~~~~~~-~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~v~ 162 (341)
.||+|.+|+.+++.|++.||+++++.. ...+|+.+++.++ +|+|.+..+.+ +...+.++.+.. ..+...+++|
T Consensus 59 ~vG~D~~g~~~~~~l~~~GVd~~~~~~~~~~~tg~~~i~~~~~g~r~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~~ 134 (311)
T COG0524 59 AVGDDDFGEFLLEELRKEGVDTSHVVTDEGATTGLALILVDEDGERTFVFYRGAAALLLTPEDLDE----DELAGADVLH 134 (311)
T ss_pred EecCcHHHHHHHHHHHHcCCccceEEEcCCCcceEEEEEEcCCCceeEEEECCcccccCChHHcCh----HHHhhcCeee
Confidence 999999999999999999999998854 4447888888886 68999988877 455677777763 5678999999
Q ss_pred EeccccccCHHHHHHHHHHHHhCCCeEEEeCCc--hhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHH
Q 019448 163 IAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSA--PFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 240 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~--~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~ 240 (341)
++++.+..+++.+..+++.+++++.++.+|+.. ..|. .+.+.++++++|++++|++|++.+++. ..+..+.
T Consensus 135 ~~~~~l~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~---~~~~~~~l~~~d~~~~n~~E~~~l~g~----~~~~~~~ 207 (311)
T COG0524 135 ISGIQLEIPPEALLAALELAKAAGVTVSFDLNPRPALWD---RELLEELLALADILFPNEEEAELLTGL----EEDAEAA 207 (311)
T ss_pred EEEeecCCChHHHHHHHHHHHHcCCeEEEecCCCccccc---hhhHHHHHhhCCEEeCCHHHHHHHhCC----CccHHHH
Confidence 999988777799999999999999986666543 3332 466889999999999999999999873 2455555
Q ss_pred HHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHH
Q 019448 241 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGC 320 (341)
Q Consensus 241 ~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~ 320 (341)
...+ +..+++.+|+|+|++|+.+++.+...+++..+.++++++|||||||+|.|||++++++|+++++|+++|+
T Consensus 208 ~~~~------~~~~~~~vvvt~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~agfl~~~~~g~~~~~a~~~a~ 281 (311)
T COG0524 208 AALL------LAKGVKTVVVTLGAEGAVVFTGGGEVTVPVPAAFKVKVVDTTGAGDAFAAGFLAGLLEGKSLEEALRFAN 281 (311)
T ss_pred HHHH------hhcCCCEEEEEeCCCcEEEEeCCCceeeccCCCCccccccCCCchHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 5555 6778999999999999999987553555544455669999999999999999999999999999999999
Q ss_pred HHhhhhhhhcccc--CCCCCC
Q 019448 321 YTSHVIIQRSGCT--YPEKPE 339 (341)
Q Consensus 321 ~~Aa~~v~~~g~~--~p~~~~ 339 (341)
++|++++++.|+. +|..++
T Consensus 282 a~aa~~~~~~g~~~~~p~~~~ 302 (311)
T COG0524 282 AAAALAVTRPGARPSLPTREE 302 (311)
T ss_pred HHhhhhhccCCCCCCCCCHHH
Confidence 9999999999995 555544
|
|
| >TIGR02152 D_ribokin_bact ribokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=311.43 Aligned_cols=288 Identities=26% Similarity=0.377 Sum_probs=242.7
Q ss_pred cCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEeeeecC
Q 019448 11 GNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKD 90 (341)
Q Consensus 11 G~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~~vG~D 90 (341)
|.+++|++..++ ++|..++..+..+...++||.+.|+|.++++ +|.++.++|.+|+|
T Consensus 1 G~~~~D~~~~~~--------------------~~p~~~~~~~~~~~~~~~GG~~~Nva~~l~~---lg~~~~~~~~vG~D 57 (293)
T TIGR02152 1 GSINMDLVLRTD--------------------RLPKPGETVHGHSFQIGPGGKGANQAVAAAR---LGAEVSMIGKVGDD 57 (293)
T ss_pred CCceEeEEEEeC--------------------CCCCCCCcEecCCceecCCCcHHHHHHHHHH---CCCCEEEEEEecCC
Confidence 788999999887 6788888888888899999999999999997 46999999999999
Q ss_pred chhHHHHHHHHhcCcceeeeec-CCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccceEEEEecccc
Q 019448 91 KFGEEMKKNSKLAGVNVHYYED-ESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFL 168 (341)
Q Consensus 91 ~~g~~i~~~l~~~gi~~~~~~~-~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~i~~~~~ 168 (341)
.+|+.+++.|++.||+++++.. .+.+|+.++++.+ +|+|+++.+.++...+.++++.. ..+.+..+|++++++
T Consensus 58 ~~g~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--- 132 (293)
T TIGR02152 58 AFGDELLENLKSNGIDTEYVGTVKDTPTGTAFITVDDTGENRIVVVAGANAELTPEDIDA--AEALIAESDIVLLQL--- 132 (293)
T ss_pred ccHHHHHHHHHHcCCCeeEEEEcCCCCCceEEEEEcCCCCEEEEEECCcCCcCCHHHHHH--HHhhhccCCEEEEec---
Confidence 9999999999999999999864 4567888888876 58888877766666666666643 234678999999874
Q ss_pred ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHHHHhcCC
Q 019448 169 TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWP 248 (341)
Q Consensus 169 ~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~~l~~~~ 248 (341)
+.+.+.+..+++.+++++.++++|+.... .....++++++|++++|++|+..+++....+.++.+++++.+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~v~~D~~~~~-----~~~~~~~~~~~d~l~~n~~E~~~l~~~~~~~~~~~~~~~~~l---- 203 (293)
T TIGR02152 133 EIPLETVLEAAKIAKKHGVKVILNPAPAI-----KDLDDELLSLVDIITPNETEAEILTGIEVTDEEDAEKAAEKL---- 203 (293)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEECCcCc-----ccchHHHHhcCCEEccCHHHHHHHhCCCCCCcchHHHHHHHH----
Confidence 45678889999999999999999997532 111257789999999999999999876444445677788887
Q ss_pred ccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHHHhhhhhh
Q 019448 249 KASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQ 328 (341)
Q Consensus 249 ~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~Aa~~v~ 328 (341)
.+.|++.+|||+|++|+.++++++.+++|++++ +++||+||||+|+|||++++++|+++++|+++|+.+|+.+++
T Consensus 204 --~~~g~~~vvvt~G~~g~~~~~~~~~~~~~~~~~---~~vdt~GAGDaf~Ag~l~~l~~g~~~~~al~~a~~~Aa~~~~ 278 (293)
T TIGR02152 204 --LEKGVKNVIITLGSKGALLVSKDESKLIPAFKV---KAVDTTAAGDTFNGAFAVALAEGKSLEDAIRFANAAAAISVT 278 (293)
T ss_pred --HHcCCCeEEEEeCCCceEEEeCCceeEccCCCC---ceeCCCCcHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHc
Confidence 567889999999999999998888888776654 789999999999999999999999999999999999999999
Q ss_pred hcccc--CCCCCCC
Q 019448 329 RSGCT--YPEKPEF 340 (341)
Q Consensus 329 ~~g~~--~p~~~~~ 340 (341)
+.|+. +|+.+++
T Consensus 279 ~~G~~~~~~~~~~~ 292 (293)
T TIGR02152 279 RKGAQSSIPYLEEV 292 (293)
T ss_pred ccCcccCCCChHHc
Confidence 99995 4887775
|
This model describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences, few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not. |
| >PRK09434 aminoimidazole riboside kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-42 Score=310.30 Aligned_cols=283 Identities=23% Similarity=0.336 Sum_probs=227.4
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i 84 (341)
.+|+++|++++|++...+ ......+||++.|+|.++++ ||.++.++
T Consensus 3 ~~il~iG~~~iD~~~~~~-------------------------------~~~~~~~GG~~~N~a~~l~~---LG~~~~~v 48 (304)
T PRK09434 3 NKVWVLGDAVVDLIPEGE-------------------------------NRYLKCPGGAPANVAVGIAR---LGGESGFI 48 (304)
T ss_pred CcEEEecchheeeecCCC-------------------------------CceeeCCCChHHHHHHHHHH---cCCCceEE
Confidence 489999999999985311 22356899999999999997 46999999
Q ss_pred eeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeec--ccccccCCcccCCCcchhhhhccceE
Q 019448 85 GCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVAN--LSAANCYKSEHLKKPENWALVEKAKY 160 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~ 160 (341)
|.+|+|.+|+++++.|++.||++.++. .++.+|+.+++..+ +|+|++... .++...+++++++ .+.+.++
T Consensus 49 ~~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~~t~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 122 (304)
T PRK09434 49 GRVGDDPFGRFMQQTLQDEGVDTTYLRLDPAHRTSTVVVDLDDQGERSFTFMVRPSADLFLQPQDLP------PFRQGEW 122 (304)
T ss_pred EEecCchHHHHHHHHHHHcCCCCcceEEcCCCCceEEEEEECCCCCEeEEEecCCchhhhCCHHHhh------hhcCCCE
Confidence 999999999999999999999999875 45667888877776 478875432 2333334444443 2678999
Q ss_pred EEEeccccccC--HHHHHHHHHHHHhCCCeEEEeCCch--hHH--HHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCC
Q 019448 161 FYIAGFFLTVS--PDSIQLVAEHAAANNKVFMMNLSAP--FIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWET 234 (341)
Q Consensus 161 v~i~~~~~~~~--~~~~~~~~~~a~~~~~~v~~d~~~~--~~~--~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~ 234 (341)
+|++++....+ .+...++++.+++++.++.+|+... .|. ...++.++++++++|++++|++|+..+++.
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~n~~e~~~l~g~----- 197 (304)
T PRK09434 123 LHLCSIALSAEPSRSTTFEAMRRIKAAGGFVSFDPNLREDLWQDEAELRECLRQALALADVVKLSEEELCFLSGT----- 197 (304)
T ss_pred EEEccccccCchHHHHHHHHHHHHHHcCCEEEECCCCChhhccCHHHHHHHHHHHHHhcceeeCCHHHHHHHhCC-----
Confidence 99988654323 3566788899999999999998642 221 234566778899999999999999999763
Q ss_pred CCHHHHHHHHhcCCcccc-CCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCC---
Q 019448 235 DDVEEIALKLSQWPKASE-IRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK--- 310 (341)
Q Consensus 235 ~d~~~~~~~l~~~~~~~~-~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~--- 310 (341)
++.+++++.+ .+ .+++.+|||+|++|++++++++.+++|+++. +++|||||||+|+|||++++++|+
T Consensus 198 ~~~~~~~~~l------~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~---~~vDttGAGD~f~ag~~~~l~~g~~~~ 268 (304)
T PRK09434 198 SQLEDAIYAL------ADRYPIALLLVTLGAEGVLVHTRGQVQHFPAPSV---DPVDTTGAGDAFVAGLLAGLSQAGLWT 268 (304)
T ss_pred CCHHHHHHHH------HhhcCCcEEEEEecCCceEEEeCCceeEeCCCCC---CCCcCCCchHHHHHHHHHHHHcCCCcc
Confidence 4677888887 33 4688999999999999998888888887654 889999999999999999999997
Q ss_pred ---CHHHHHHHHHHHhhhhhhhccc--cCCCCCCCC
Q 019448 311 ---PIEECVRAGCYTSHVIIQRSGC--TYPEKPEFN 341 (341)
Q Consensus 311 ---~~~~a~~~a~~~Aa~~v~~~g~--~~p~~~~~~ 341 (341)
++++|+++|+++|+++|++.|+ .+|..++++
T Consensus 269 ~~~~~~~a~~~a~~~Aa~~v~~~g~~~~~~~~~~~~ 304 (304)
T PRK09434 269 DEAELAEIIAQAQACGALATTAKGAMTALPNRQELE 304 (304)
T ss_pred chHHHHHHHHHHHHHHHHHHcccCCcCCCCChHHcC
Confidence 8999999999999999999996 678777763
|
|
| >PF00294 PfkB: pfkB family carbohydrate kinase; InterPro: IPR011611 This entry includes a variety of carbohydrate and pyrimidine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-43 Score=315.67 Aligned_cols=291 Identities=26% Similarity=0.398 Sum_probs=236.1
Q ss_pred CceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEE
Q 019448 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~ 83 (341)
|.+|+++|++++|++..++. + .+...+..+...++||++.|+|.+|++ ||.++.+
T Consensus 1 m~~v~~iG~~~iD~~~~~~~--------------------~--~~~~~~~~~~~~~~GG~~~n~a~~l~~---LG~~v~~ 55 (301)
T PF00294_consen 1 MKKVLVIGEVNIDIIGYVDR--------------------F--KGDLVRVSSVKRSPGGAGANVAIALAR---LGADVAL 55 (301)
T ss_dssp EEEEEEESEEEEEEEEESSS--------------------H--TTSEEEESEEEEEEESHHHHHHHHHHH---TTSEEEE
T ss_pred CCcEEEECccceEEEeecCC--------------------c--CCcceecceEEEecCcHHHHHHHHHHh---ccCcceE
Confidence 46899999999999998872 2 222335677889999999999999998 4699999
Q ss_pred EeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccceEE
Q 019448 84 IGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYF 161 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 161 (341)
+|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.++++.+ +|+|++..+.+....++++++ .+..+.+++++
T Consensus 56 i~~vG~D~~g~~i~~~l~~~gv~~~~i~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 131 (301)
T PF00294_consen 56 IGKVGDDFFGEIILEELKERGVDTSYIPRDGDEPTGRCLIIVDPDGERTFVFSPGANSDLTPDEL----DEEAIDEADIL 131 (301)
T ss_dssp EEEEESSHHHHHHHHHHHHTTEEETTEEEESSSEEEEEEEEEETTSEEEEEEEEGGGGGGGHHHH----HHHHHHTESEE
T ss_pred EeeccCcchhhhhhhccccccccccccccccccccceeEeeecccccceeeeccccccccccccc----cccccccccce
Confidence 9999999999999999999999999886 55568999988887 688988888777777766655 34678999999
Q ss_pred EEec-ccc-ccCHHHHHHHHHHHHhCCC--eEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCH
Q 019448 162 YIAG-FFL-TVSPDSIQLVAEHAAANNK--VFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDV 237 (341)
Q Consensus 162 ~i~~-~~~-~~~~~~~~~~~~~a~~~~~--~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~ 237 (341)
++++ ... ..+.+.+..+.+.+++.+. ++..++.. .. .++.+.++++++|++++|++|+..+++... ++.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~l~~~dil~~n~~E~~~l~~~~~---~~~ 204 (301)
T PF00294_consen 132 HLSGVSLPEGIPEDLLEALAKAAKKNGPFDPVFRDPSW---DD-LREDLKELLPYADILKPNEEEAEALTGSKI---DDP 204 (301)
T ss_dssp EEESGHCSTTSHHHHHHHHHHHHHHTTEEEEEEEGGGS---HH-HHHHHHHHHHTSSEEEEEHHHHHHHHTCST---SSH
T ss_pred eecccccccccccceeeecccccccccccccccccccc---cc-cchhhhhhccccchhccccccccccccccc---cch
Confidence 9999 332 3345667777777777773 34444433 22 456788888999999999999999988542 345
Q ss_pred HHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHH
Q 019448 238 EEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVR 317 (341)
Q Consensus 238 ~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~ 317 (341)
+++.+.+.++ +..+++.+|+|+|++|++++++++.++++++ ++.+++|+|||||+|+|||++++++|+++++|++
T Consensus 205 ~~~~~~~~~l---~~~g~~~vivt~G~~G~~~~~~~~~~~~~~~--~~~~vvdttGAGD~f~A~~i~~l~~~~~~~~a~~ 279 (301)
T PF00294_consen 205 EDALAALREL---QARGVKIVIVTLGEDGALYYTNDESYHVPPV--PPVNVVDTTGAGDAFAAGFIYGLLSGMSLEEALK 279 (301)
T ss_dssp HHHHHHHHHH---HHTTSSEEEEEEGGGEEEEEETTEEEEEEEE--SSSSSSSCTTHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred hhhhcccccc---chhhhhhhhccccccCccccccccccccccc--ccccccceeccchhhhHHHHHHHHcCCCHHHHHH
Confidence 5554444221 4578899999999999999999999998876 3459999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhccccCC
Q 019448 318 AGCYTSHVIIQRSGCTYP 335 (341)
Q Consensus 318 ~a~~~Aa~~v~~~g~~~p 335 (341)
+|+++|+++|++.|+..|
T Consensus 280 ~a~~~aa~~v~~~g~~~~ 297 (301)
T PF00294_consen 280 FANAAAALKVQQPGPRSP 297 (301)
T ss_dssp HHHHHHHHHHTSSSSSGG
T ss_pred HHHHHHHHHhCCCCCcCC
Confidence 999999999999999544
|
The family includes phosphomethylpyrimidine kinase (2.7.4.7 from EC). This enzyme is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 1VM7_B 2ABQ_B 3GO7_B 3GO6_B 3FHY_A 4EOH_B 2YXU_A 2F7K_A 3KEU_A 2YXT_B .... |
| >cd01942 ribokinase_group_A Ribokinase-like subgroup A | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-42 Score=306.68 Aligned_cols=277 Identities=22% Similarity=0.264 Sum_probs=225.1
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
+|+|+|++++|++..++ ++|..++..+..+....+||++.|+|.++++ ||.++.++|
T Consensus 1 ~v~~iG~~~~D~~~~v~--------------------~~p~~~~~~~~~~~~~~~GG~~~Nva~~l~~---lg~~~~~~~ 57 (279)
T cd01942 1 DVAVVGHLNYDIILKVE--------------------SFPGPFESVLVKDLRREFGGSAGNTAVALAK---LGLSPGLVA 57 (279)
T ss_pred CEEEEecceeeeEeecc--------------------cCCCCCceEecceeeecCCcHHHHHHHHHHH---cCCCceEEE
Confidence 68999999999999887 6677667777888899999999999999997 469999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeee-ecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccceEEEE
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYY-EDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYI 163 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~-~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~i 163 (341)
.+|+|.+|+.+++.|++.||+++++ ...+.+|+.++++.+ +++|.++...++...+++++ . ...+.+++++|+
T Consensus 58 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~ 132 (279)
T cd01942 58 AVGEDFHGRLYLEELREEGVDTSHVRVVDEDSTGVAFILTDGDDNQIAYFYPGAMDELEPND-E----ADPDGLADIVHL 132 (279)
T ss_pred EecCCcchHHHHHHHHHcCCCccceEEcCCCCcceEEEEEcCCCCEEEEecCCcccccccCC-c----hhhhcccCEEEe
Confidence 9999999999999999999999998 455667888887776 56777665666665666554 2 246789999999
Q ss_pred eccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHHH
Q 019448 164 AGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALK 243 (341)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~~ 243 (341)
++.. .+.++++.+++.+.++++|+.... .....+.++++++++|++++|++|+..+....+. .+..
T Consensus 133 ~~~~------~~~~~~~~~~~~g~~v~~D~~~~~-~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~--~~~~----- 198 (279)
T cd01942 133 SSGP------GLIELARELAAGGITVSFDPGQEL-PRLSGEELEEILERADILFVNDYEAELLKERTGL--SEAE----- 198 (279)
T ss_pred CCch------HHHHHHHHHHHcCCeEEEcchhhh-hhccHHHHHHHHhhCCEEecCHHHHHHHHhhcCC--ChHH-----
Confidence 8642 467777888888999999997532 1113355778899999999999999644322211 1111
Q ss_pred HhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHHHh
Q 019448 244 LSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTS 323 (341)
Q Consensus 244 l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~A 323 (341)
...+++.+|+|+|++|++++++++.+++|++ ++++++|||||||+|+|||+++|++|+++++|+++|+++|
T Consensus 199 -------~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~--~~~~vvDttGAGDaf~a~~i~~l~~g~~l~~al~~a~~~A 269 (279)
T cd01942 199 -------LASGVRVVVVTLGPKGAIVFEDGEEVEVPAV--PAVKVVDTTGAGDAFRAGFLYGLLRGYDLEESLRLGNLAA 269 (279)
T ss_pred -------HhcCCCEEEEEECCCceEEEECCceEEccCc--CcCCCcCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 1146789999999999999998888888876 2348999999999999999999999999999999999999
Q ss_pred hhhhhhcccc
Q 019448 324 HVIIQRSGCT 333 (341)
Q Consensus 324 a~~v~~~g~~ 333 (341)
+++++++|++
T Consensus 270 a~~~~~~G~~ 279 (279)
T cd01942 270 SLKVERRGAQ 279 (279)
T ss_pred HHHHcccCCC
Confidence 9999999863
|
Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. |
| >cd01167 bac_FRK Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-42 Score=306.62 Aligned_cols=278 Identities=24% Similarity=0.325 Sum_probs=227.6
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
||+|+|++++|++...+ +. ..+....+||.+.|+|.++++ +|.++.++|
T Consensus 1 ~ilviG~~~~D~~~~~~--------------------~~--------~~~~~~~~GG~~~n~a~~l~~---lg~~v~~i~ 49 (295)
T cd01167 1 KVVCFGEALIDFIPEGS--------------------GA--------PETFTKAPGGAPANVAVALAR---LGGKAAFIG 49 (295)
T ss_pred CEEEEcceeEEEecCCC--------------------CC--------CccccccCCCcHHHHHHHHHh---cCCCeEEEE
Confidence 68999999999998664 11 456678999999999999997 469999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecccccccCCccc-CCCcchhhhhccceEEE
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEH-LKKPENWALVEKAKYFY 162 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~v~ 162 (341)
.+|+|.+|+.+++.|++.||++.++. ..+.+|+.++++++ +|+|++....+.......+. +. ...++++++++
T Consensus 50 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~T~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~ 125 (295)
T cd01167 50 KVGDDEFGDFLLETLKEAGVDTRGIQFDPAAPTTLAFVTLDADGERSFEFYRGPAADLLLDTELN----PDLLSEADILH 125 (295)
T ss_pred eecCcHHHHHHHHHHHHcCCCchheeecCCCCceEEEEEECCCCCEeEEeecCCcHhhhcCccCC----hhHhccCCEEE
Confidence 99999999999999999999999885 56778999988886 78888776655433222221 21 25678899999
Q ss_pred Eecccccc--CHHHHHHHHHHHHhCCCeEEEeCCch--hHH--HHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCC
Q 019448 163 IAGFFLTV--SPDSIQLVAEHAAANNKVFMMNLSAP--FIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDD 236 (341)
Q Consensus 163 i~~~~~~~--~~~~~~~~~~~a~~~~~~v~~d~~~~--~~~--~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d 236 (341)
++++.... ..+.+.++++.+++.+.++++|+... .|. ....+.+.++++++|++++|++|+..+++. .+
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~d~l~~n~~E~~~l~~~-----~~ 200 (295)
T cd01167 126 FGSIALASEPSRSALLELLEAAKKAGVLISFDPNLRPPLWRDEEEARERIAELLELADIVKLSDEELELLFGE-----ED 200 (295)
T ss_pred EechhhccchHHHHHHHHHHHHHHcCCEEEEcCCCChhhcCCHHHHHHHHHHHHHhCCEEEecHHHHHHHhCC-----CC
Confidence 98753211 23668889999999999999999642 232 123555788999999999999999998763 34
Q ss_pred HHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCC------
Q 019448 237 VEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK------ 310 (341)
Q Consensus 237 ~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~------ 310 (341)
..++++.+ ...+++.+|||+|++|++++++++.+++|+++. +++|||||||+|+|||+++|++|+
T Consensus 201 ~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~a~~~---~vvDttGAGD~f~a~~~~~l~~g~~~~~~~ 271 (295)
T cd01167 201 PEEIAALL------LLFGLKLVLVTRGADGALLYTKGGVGEVPGIPV---EVVDTTGAGDAFVAGLLAQLLSRGLLALDE 271 (295)
T ss_pred HHHHHHHH------hhcCCCEEEEecCCcceEEEECCcceeeCCCCc---ceeeCCCccHHHHHHHHHHHHhCCcccccH
Confidence 56677777 567899999999999999999888888887754 899999999999999999999999
Q ss_pred -CHHHHHHHHHHHhhhhhhhccc
Q 019448 311 -PIEECVRAGCYTSHVIIQRSGC 332 (341)
Q Consensus 311 -~~~~a~~~a~~~Aa~~v~~~g~ 332 (341)
++++|+++|+++|+++|+++|+
T Consensus 272 ~~~~~a~~~a~~~aa~~~~~~G~ 294 (295)
T cd01167 272 DELAEALRFANAVGALTCTKAGA 294 (295)
T ss_pred HHHHHHHHHHHHhhHHHhcccCC
Confidence 9999999999999999999986
|
This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate. |
| >PRK09954 putative kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-42 Score=316.63 Aligned_cols=290 Identities=15% Similarity=0.170 Sum_probs=223.2
Q ss_pred CceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEE
Q 019448 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~ 83 (341)
...|+|+|.+++|++..++. ++|..++ +.......+||++.|+|+++++ ||.++.|
T Consensus 57 ~~~v~viG~~~vD~~~~~~~-------------------~~p~~~~--~~~~~~~~~GG~~~NvA~~lar---LG~~v~~ 112 (362)
T PRK09954 57 QEYCVVVGAINMDIRGMADI-------------------RYPQAAS--HPGTIHCSAGGVGRNIAHNLAL---LGRDVHL 112 (362)
T ss_pred CccEEEEEEEEEEEEEeeCC-------------------cCcCCCC--CCceEEEecCcHHHHHHHHHHH---cCCCeEE
Confidence 34789999999999987752 2344333 4456778899999999999998 5699999
Q ss_pred EeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEeCCccceeeccc--ccccCCcccCCCcchhhhhccceE
Q 019448 84 IGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVVGGERSLVANLS--AANCYKSEHLKKPENWALVEKAKY 160 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~ 160 (341)
+|.||+|.+|+.+++.|++.||+++++. .++.+|+.++.+.+.++++++...+ ....++++.+.. ....+..+++
T Consensus 113 ig~VG~D~~G~~i~~~l~~~GVd~~~~~~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 190 (362)
T PRK09954 113 LSAIGDDFYGETLLEETRRAGVNVSGCIRLHGQSTSTYLAIANRQDETVLAINDTHILQQLTPQLLNG--SRDLIRHAGV 190 (362)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCccceEEcCCCCCeEEEEEEcCCCCEEEEEcCchhhhcCCHHHHHH--HHHHHhcCCE
Confidence 9999999999999999999999999874 5566788877766655565554432 223455444432 2244678899
Q ss_pred EEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHH
Q 019448 161 FYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 240 (341)
Q Consensus 161 v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~ 240 (341)
+++++ +.+++.+..+++.+ +++++++|+.+.. ..+.++++++++|++++|++|++.+++....+.++.+++
T Consensus 191 v~~~~---~~~~~~~~~~~~~a--~~~~v~~D~~~~~----~~~~~~~~l~~~dil~~n~~Ea~~l~g~~~~~~~~~~~~ 261 (362)
T PRK09954 191 VLADC---NLTAEALEWVFTLA--DEIPVFVDTVSEF----KAGKIKHWLAHIHTLKPTQPELEILWGQAITSDADRNAA 261 (362)
T ss_pred EEEEC---CCCHHHHHHHHHhC--CCCcEEEECCCHH----HhhhhhhhhccccEEecCHHHHHHHcCCCCCCHHHHHHH
Confidence 98875 34566666666654 4788999997643 123366789999999999999999987433223345577
Q ss_pred HHHHhcCCccccCCccEEEEEeCCCceEEEECC-eeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHH
Q 019448 241 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDG-KLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAG 319 (341)
Q Consensus 241 ~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~-~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a 319 (341)
++.+ .+.|++.||||+|++|+++++.+ ..+++|++++ +++|||||||+|+|||++++++|+++++|+++|
T Consensus 262 ~~~l------~~~g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~Ag~l~~l~~g~~~~eal~~a 332 (362)
T PRK09954 262 VNAL------HQQGVQQIFVYLPDESVFCSEKDGEQFLLTAPAH---TTVDSFGADDGFMAGLVYSFLEGYSFRDSARFA 332 (362)
T ss_pred HHHH------HHcCCCEEEEEeCCccEEEEeCCCceEeccCCCc---ccccccchHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 7777 66789999999999999988754 4566666544 899999999999999999999999999999999
Q ss_pred HHHhhhhhhhccccCCCC
Q 019448 320 CYTSHVIIQRSGCTYPEK 337 (341)
Q Consensus 320 ~~~Aa~~v~~~g~~~p~~ 337 (341)
+++|++++.+..+..|+.
T Consensus 333 ~a~Aal~~~s~~~~~~~~ 350 (362)
T PRK09954 333 MACAAISRASGSLNNPTL 350 (362)
T ss_pred HHHHHHHhcCCCcCCCcC
Confidence 999999988777766664
|
|
| >cd01166 KdgK 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=305.99 Aligned_cols=283 Identities=25% Similarity=0.348 Sum_probs=226.6
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
+|+|+|++++|++...++ +..........+||++.|+|+++++ +|.++.++|
T Consensus 1 ~i~~iG~~~iD~~~~~~~-------------------------~~~~~~~~~~~~GG~~~N~a~~la~---lg~~~~~i~ 52 (294)
T cd01166 1 DVVTIGEVMVDLSPPGGG-------------------------RLEQADSFRKFFGGAEANVAVGLAR---LGHRVALVT 52 (294)
T ss_pred CeEEechhheeeecCCCC-------------------------ccchhhccccccCChHHHHHHHHHh---cCCceEEEE
Confidence 589999999999875541 1234456678999999999999997 469999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeee-ecCCCCceeEEEEEe-CCccceeeccc--ccccCCcccCCCcchhhhhccceEE
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYY-EDESASTGTCAVCVV-GGERSLVANLS--AANCYKSEHLKKPENWALVEKAKYF 161 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~-~~~~~~t~~~~~~~~-~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~v 161 (341)
.+|+|.+|+.+++.|++.||+++++ ...+.+|+.+++..+ +|+|+++.+.+ +...++.+++. ...+++++++
T Consensus 53 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v 128 (294)
T cd01166 53 AVGDDPFGRFILAELRREGVDTSHVRVDPGRPTGLYFLEIGAGGERRVLYYRAGSAASRLTPEDLD----EAALAGADHL 128 (294)
T ss_pred ecCCCHHHHHHHHHHHHcCCCCceEEEeCCCcceEEEEEecCCCCceEEEeCCCChhHhCChhhCC----HHHHhCCCEE
Confidence 9999999999999999999999998 456667888888776 47887766532 33455555554 2567899999
Q ss_pred EEeccccccCH---HHHHHHHHHHHhCCCeEEEeCCchhH---HHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCC
Q 019448 162 YIAGFFLTVSP---DSIQLVAEHAAANNKVFMMNLSAPFI---CEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETD 235 (341)
Q Consensus 162 ~i~~~~~~~~~---~~~~~~~~~a~~~~~~v~~d~~~~~~---~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~ 235 (341)
|++++.+...+ +.+..+++.+++.+.++++|+..... .....+.++++++++|++++|++|++.+++..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~~~~~~~~~~~~~~~~dil~~n~~E~~~l~~~~----- 203 (294)
T cd01166 129 HLSGITLALSESAREALLEALEAAKARGVTVSFDLNYRPKLWSAEEAREALEELLPYVDIVLPSEEEAEALLGDE----- 203 (294)
T ss_pred EEcCcchhhCHHHHHHHHHHHHHHHHcCCEEEECCCCcchhcChHHHHHHHHHHHHhCCEEEcCHHHHHHHhCCC-----
Confidence 99987654333 67888999999999999999974321 12234556788999999999999999998642
Q ss_pred CHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHH
Q 019448 236 DVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEEC 315 (341)
Q Consensus 236 d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a 315 (341)
...++.+.+.+ ++.+++.+|||+|++|++++++++.+++|++++ +++||+||||+|+|||+++|++|+++++|
T Consensus 204 ~~~~~~~~~~~----l~~g~~~viit~G~~G~~~~~~~~~~~~~~~~~---~~vdt~GAGD~f~a~~~~~l~~g~~~~~a 276 (294)
T cd01166 204 DPTDAAERALA----LALGVKAVVVKLGAEGALVYTGGGRVFVPAYPV---EVVDTTGAGDAFAAGFLAGLLEGWDLEEA 276 (294)
T ss_pred CchhHHHHHHh----hcCCccEEEEEEcCCceEEEECCceEEeCCCCc---ccccCCCchHHHHHHHHHHHHcCCCHHHH
Confidence 12233333321 135788999999999999999888888887654 78999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhccc
Q 019448 316 VRAGCYTSHVIIQRSGC 332 (341)
Q Consensus 316 ~~~a~~~Aa~~v~~~g~ 332 (341)
+++|+++|+.+|++.|+
T Consensus 277 ~~~a~~~aa~~i~~~G~ 293 (294)
T cd01166 277 LRFANAAAALVVTRPGD 293 (294)
T ss_pred HHHHHHHHHHHHhcCCC
Confidence 99999999999999985
|
KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources. |
| >cd01172 RfaE_like RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-42 Score=311.86 Aligned_cols=295 Identities=17% Similarity=0.208 Sum_probs=225.7
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
+|+++|++.+|+++.++.+. ++. +.+. ...........+|| +.|+|.++++ ||.++.++|
T Consensus 1 ~vl~iG~~~~D~~~~~~~~~---~~~-----------~~~~--~~~~~~~~~~~~GG-~~NvA~~la~---LG~~~~~i~ 60 (304)
T cd01172 1 KVLVVGDVILDEYLYGDVER---ISP-----------EAPV--PVVKVEREEIRLGG-AANVANNLAS---LGAKVTLLG 60 (304)
T ss_pred CEEEEcceeEEeeEeecccc---ccC-----------CCCc--ceEEeeeEEecCcH-HHHHHHHHHH---hCCCeEEEE
Confidence 68999999999998764111 000 0011 11122345678999 6899999998 469999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCCcccCCC--cchhhhhccceEEEE
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKK--PENWALVEKAKYFYI 163 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~v~i 163 (341)
.+|+|.+|+.+++.|++.||+++++..++.+|+.++.+.+++++.+..+......++.+.... ......++++|++++
T Consensus 61 ~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~ 140 (304)
T cd01172 61 VVGDDEAGDLLRKLLEKEGIDTDGIVDEGRPTTTKTRVIARNQQLLRVDREDDSPLSAEEEQRLIERIAERLPEADVVIL 140 (304)
T ss_pred EEcCCccHHHHHHHHHhCCCCcceEecCCCCceEEEEEecCCcEEEEEecCCCCCCCHHHHHHHHHHHHHhhccCCEEEE
Confidence 999999999999999999999998666666688877776655555544433333333322111 112345789999999
Q ss_pred ecccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHH
Q 019448 164 AGFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL 242 (341)
Q Consensus 164 ~~~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~ 242 (341)
+++.. .++++.+..+++.+++.+.++++|+....+ ..++++|++++|++|++.+++....+.++++++++
T Consensus 141 s~~~~~~~~~~~~~~~~~~a~~~~~~v~~D~~~~~~---------~~~~~~d~l~~n~~E~~~l~~~~~~~~~~~~~~~~ 211 (304)
T cd01172 141 SDYGKGVLTPRVIEALIAAARELGIPVLVDPKGRDY---------SKYRGATLLTPNEKEAREALGDEINDDDELEAAGE 211 (304)
T ss_pred EcCCCCccCHHHHHHHHHHHHhcCCCEEEeCCCcch---------hhccCCcEeCCCHHHHHHHhCCCCCChHHHHHHHH
Confidence 87643 456788999999999999999999986531 56789999999999999998754333345666777
Q ss_pred HHhcCCccccCCccEEEEEeCCCceEEEE-CCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHH
Q 019448 243 KLSQWPKASEIRKRTAVITQGADPVVVAQ-DGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCY 321 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~-~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~ 321 (341)
.+. ...|++.+|||+|++|+++++ +++.+++|++++ +++|||||||+|+|||+++|++|+++++|+++|++
T Consensus 212 ~l~-----~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~---~vvdttGAGDaf~ag~i~~l~~g~~~~~al~~a~a 283 (304)
T cd01172 212 KLL-----ELLNLEALLVTLGEEGMTLFERDGEVQHIPALAK---EVYDVTGAGDTVIATLALALAAGADLEEAAFLANA 283 (304)
T ss_pred HHH-----HHhCCCeEEEEcCCCccEEEcCCCcEEEecCCCC---CCCCCcCccHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 662 235789999999999999998 777888887754 89999999999999999999999999999999999
Q ss_pred HhhhhhhhccccCCCC
Q 019448 322 TSHVIIQRSGCTYPEK 337 (341)
Q Consensus 322 ~Aa~~v~~~g~~~p~~ 337 (341)
+|+++|++.|+....+
T Consensus 284 ~Aa~~~~~~g~~~~~~ 299 (304)
T cd01172 284 AAGVVVGKVGTAPVTP 299 (304)
T ss_pred HhheeeecCCCCCcCH
Confidence 9999999999864443
|
LPS plays an important role in maintaining the structural integrity of the bacterial outer membrane of gram-negative bacteria. RfaE consists of two domains, a sugar kinase domain, represented here, and a domain belonging to the cytidylyltransferase superfamily. |
| >cd01940 Fructoselysine_kinase_like Fructoselysine kinase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=299.92 Aligned_cols=261 Identities=19% Similarity=0.302 Sum_probs=212.7
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
+|+++|++++|++... ...++||++.|+|.++++ +|.++.++|
T Consensus 1 ~v~~iG~~~~D~~~~~----------------------------------~~~~~GG~~~Nva~~la~---lG~~~~~~~ 43 (264)
T cd01940 1 RLAAIGDNVVDKYLHL----------------------------------GKMYPGGNALNVAVYAKR---LGHESAYIG 43 (264)
T ss_pred CeEEEcceEEEEeccC----------------------------------ceecCCCcHHHHHHHHHH---cCCCeeEEe
Confidence 6899999999998621 357899999999999997 569999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecc-cccccCCcccCCCcchhhhhccceEEEEe
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANL-SAANCYKSEHLKKPENWALVEKAKYFYIA 164 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~v~i~ 164 (341)
.+|+|.+|+.+++.|++.||+++++...+.+|+.+++...+|+|+++.+. +......+... ....+.++|++|++
T Consensus 44 ~vG~D~~g~~i~~~l~~~gI~~~~v~~~~~~t~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~~ 119 (264)
T cd01940 44 AVGNDDAGAHVRSTLKRLGVDISHCRVKEGENAVADVELVDGDRIFGLSNKGGVAREHPFEA----DLEYLSQFDLVHTG 119 (264)
T ss_pred cccCchhHHHHHHHHHHcCCChhheEEcCCCCceEEEEecCCceEEEeecCCcHHhcccCcc----cHhHHhcCCEEEEc
Confidence 99999999999999999999999886555678887755557888765543 32222222211 23457899999998
Q ss_pred ccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHHHH
Q 019448 165 GFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKL 244 (341)
Q Consensus 165 ~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~~l 244 (341)
+.. +.+.+.++++.++++++++++|+.... ..+.+.++++++|++++|++|.. ..+..++++.+
T Consensus 120 ~~~---~~~~~~~~~~~a~~~g~~v~~D~~~~~----~~~~~~~~~~~~d~~~~~~~~~~---------~~~~~~~~~~l 183 (264)
T cd01940 120 IYS---HEGHLEKALQALVGAGALISFDFSDRW----DDDYLQLVCPYVDFAFFSASDLS---------DEEVKAKLKEA 183 (264)
T ss_pred ccc---cHHHHHHHHHHHHHcCCEEEEcCcccC----CHHHHHhhcccCCEEEechhhcC---------cchHHHHHHHH
Confidence 753 256788999999999999999997642 12336678999999999987642 23456677777
Q ss_pred hcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCC-HHHHHHHHHHHh
Q 019448 245 SQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKP-IEECVRAGCYTS 323 (341)
Q Consensus 245 ~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~-~~~a~~~a~~~A 323 (341)
...+++.+|||+|++|++++++++.+++|++++ +++|||||||+|+|||++++++|++ +++|+++|+++|
T Consensus 184 ------~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~~---~~vDttGAGDaf~ag~i~~l~~g~~~~~~al~~a~~~a 254 (264)
T cd01940 184 ------VSRGAKLVIVTRGEDGAIAYDGAVFYSVAPRPV---EVVDTLGAGDSFIAGFLLSLLAGGTAIAEAMRQGAQFA 254 (264)
T ss_pred ------HHcCCCEEEEEECCCCeEEEeCCeEEecCCcCC---CCCCCCCchHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 567889999999999999999888888887654 8899999999999999999999999 999999999999
Q ss_pred hhhhhhccc
Q 019448 324 HVIIQRSGC 332 (341)
Q Consensus 324 a~~v~~~g~ 332 (341)
++++++.|+
T Consensus 255 a~~~~~~G~ 263 (264)
T cd01940 255 AKTCGHEGA 263 (264)
T ss_pred HHHhcccCC
Confidence 999999986
|
Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown. |
| >cd01947 Guanosine_kinase_like Guanosine kinase-like sugar kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=300.02 Aligned_cols=263 Identities=18% Similarity=0.289 Sum_probs=214.8
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
+|+++|++++|++..++ +.|.+++..+..+....+||++.|+|.++++ +|.++.++|
T Consensus 1 ~il~iG~~~iD~~~~~~--------------------~~~~~~~~~~~~~~~~~~GG~~~Nva~~l~~---lG~~~~~i~ 57 (265)
T cd01947 1 KIAVVGHVEWDIFLSLD--------------------APPQPGGISHSSDSRESPGGGGANVAVQLAK---LGNDVRFFS 57 (265)
T ss_pred CEEEEeeeeEEEEEEec--------------------CCCCCCceeecccceeecCchHHHHHHHHHH---cCCceEEEE
Confidence 68999999999999887 5677777778888899999999999999998 469999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccceEEEEe
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIA 164 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~i~ 164 (341)
.+|+|.+|+.+++.|++ ++++.++...+..|+.++++++ +|+|+++...... ++++. +..+.++|++|++
T Consensus 58 ~vG~D~~g~~i~~~l~~-~~~~~~~~~~~~~t~~~~~~~~~~g~r~~~~~~~~~----~~~~~----~~~~~~~~~~~~~ 128 (265)
T cd01947 58 NLGRDEIGIQSLEELES-GGDKHTVAWRDKPTRKTLSFIDPNGERTITVPGERL----EDDLK----WPILDEGDGVFIT 128 (265)
T ss_pred EecCChHHHHHHHHHHh-cCCcceEEecCCCCceEEEEECCCCcceEEecCCCC----cccCC----HhHhccCCEEEEe
Confidence 99999999999999999 9998887666667999888876 6888776543221 22222 2457899999998
Q ss_pred ccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHHHH
Q 019448 165 GFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKL 244 (341)
Q Consensus 165 ~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~~l 244 (341)
+.. ...++++.+++.+ .+++|+.... ..+.+.++++++|++++|++|+..++. ++.+
T Consensus 129 ~~~------~~~~~~~~a~~~~-~~~~d~~~~~----~~~~~~~~~~~~d~~~~n~~e~~~l~~------------~~~~ 185 (265)
T cd01947 129 AAA------VDKEAIRKCRETK-LVILQVTPRV----RVDELNQALIPLDILIGSRLDPGELVV------------AEKI 185 (265)
T ss_pred ccc------ccHHHHHHHHHhC-CeEeccCccc----cchhHHHHhhhCCEEEeCHHHHHHhhh------------HHHH
Confidence 753 1245666777765 4556765432 123467889999999999999988752 3344
Q ss_pred hcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHHHhh
Q 019448 245 SQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSH 324 (341)
Q Consensus 245 ~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~Aa 324 (341)
.+.+++.+|||+|++|+.++++++.++++++++ +++|+|||||+|.|||++++++|+++++|+++|+++|+
T Consensus 186 ------~~~~~~~viit~G~~Ga~~~~~~~~~~~~~~~~---~vvDttGAGDaF~ag~l~~l~~g~~~~~al~~a~~~Aa 256 (265)
T cd01947 186 ------AGPFPRYLIVTEGELGAILYPGGRYNHVPAKKA---KVPDSTGAGDSFAAGFIYGLLKGWSIEEALELGAQCGA 256 (265)
T ss_pred ------HhccCCEEEEEeCCCCeEEEECCeeEECCCCCC---CCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 456789999999999999999888888887654 89999999999999999999999999999999999999
Q ss_pred hhhhhccc
Q 019448 325 VIIQRSGC 332 (341)
Q Consensus 325 ~~v~~~g~ 332 (341)
+++++.|+
T Consensus 257 ~~v~~~G~ 264 (265)
T cd01947 257 ICVSHFGP 264 (265)
T ss_pred HHHhccCC
Confidence 99999986
|
Found in bacteria and archaea, the guanosine kinase-like group is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. |
| >TIGR03828 pfkB 1-phosphofructokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-42 Score=307.93 Aligned_cols=289 Identities=18% Similarity=0.204 Sum_probs=230.9
Q ss_pred EEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEeee
Q 019448 8 LGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCI 87 (341)
Q Consensus 8 ~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~~v 87 (341)
.|.=++.+|++..++ ++| +++.....+...++||.+.|+|+++++ +|.++.++|.+
T Consensus 3 ~~~~~~~~D~~~~~~--------------------~~~-~g~~~~~~~~~~~~GG~~~NvA~~la~---lG~~v~~is~v 58 (304)
T TIGR03828 3 TVTLNPAIDLTIELD--------------------GLT-LGEVNRVESTRIDAGGKGINVSRVLKN---LGVDVVALGFL 58 (304)
T ss_pred EEEcchHHeEEEEcc--------------------ccc-cCceeecccccccCCccHHHHHHHHHH---cCCCeEEEEEe
Confidence 355678899999988 677 777888888899999999999999997 46999999999
Q ss_pred ecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCC--cchhhhhccceEEEEe
Q 019448 88 GKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKK--PENWALVEKAKYFYIA 164 (341)
Q Consensus 88 G~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~v~i~ 164 (341)
|+| +|+.+++.|++.||+++++... ..|+.++++.+ +|+++.+...+. .++++++.. ....+.+.+++++|++
T Consensus 59 G~D-~g~~~~~~L~~~gId~~~~~~~-~~t~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~v~~~ 134 (304)
T TIGR03828 59 GGF-TGDFIEALLREEGIKTDFVRVP-GETRINVKIKEPSGTETKLNGPGP--EISEEELEALLEKLRAQLAEGDWLVLS 134 (304)
T ss_pred cCc-hhHHHHHHHHHCCCcceEEECC-CCCeeeEEEEeCCCCEEEEECCCC--CCCHHHHHHHHHHHHHhccCCCEEEEE
Confidence 999 6999999999999999988654 35777766665 677766654442 344433322 0111357899999999
Q ss_pred cccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHHH
Q 019448 165 GFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALK 243 (341)
Q Consensus 165 ~~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~~ 243 (341)
++.. ..+++.+..+++.+++.+.++++|+..... .+.+....|++++|++|++.+++....+.++..++++.
T Consensus 135 g~~~~~~~~~~~~~~~~~~~~~~~~v~~D~~~~~~-------~~~~~~~~~i~~~n~~E~~~l~g~~~~~~~~~~~~~~~ 207 (304)
T TIGR03828 135 GSLPPGVPPDFYAELIALAREKGAKVILDTSGEAL-------RDGLKAKPFLIKPNDEELEELFGRELKTLEEIIEAARE 207 (304)
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCEEEEECChHHH-------HHHHhcCCcEECcCHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 8754 356788999999999999999999975421 11233457899999999999987543333455566777
Q ss_pred HhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHHHh
Q 019448 244 LSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTS 323 (341)
Q Consensus 244 l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~A 323 (341)
+ ++.|++.+|||+|++|++++++++.++++++++ +++|||||||+|.|||+++|++|+++++|+++|+++|
T Consensus 208 l------~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~~---~vvDttGAGDaF~a~~l~~l~~g~~~~~a~~~a~~~A 278 (304)
T TIGR03828 208 L------LDLGAENVLISLGADGALLVTKEGALFAQPPKG---EVVSTVGAGDSMVAGFLAGLESGLSLEEALRLAVAAG 278 (304)
T ss_pred H------HHcCCCEEEEccCCCCcEEEcCCceEEEeCCCc---cccCCcChHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 7 567889999999999999998887777776544 7899999999999999999999999999999999999
Q ss_pred hhhhhhccccCCCCCCC
Q 019448 324 HVIIQRSGCTYPEKPEF 340 (341)
Q Consensus 324 a~~v~~~g~~~p~~~~~ 340 (341)
+++|++.|+.+|+.+|+
T Consensus 279 a~~~~~~G~~~p~~~~~ 295 (304)
T TIGR03828 279 SAAAFSEGTGLPDPEDI 295 (304)
T ss_pred HHHhcCcCCCCCCHHHH
Confidence 99999999998887654
|
This enzyme acts in concert with the fructose-specific phosphotransferase system (PTS) which imports fructose as fructose-1-phosphate. The action of 1-phosphofructokinase results in beta-D-fructose-1,6-bisphosphate and is an entry point into glycolysis (GenProp0688). |
| >cd01939 Ketohexokinase Ketohexokinase (fructokinase, KHK) catalyzes the phosphorylation of fructose to fructose-1-phosphate (F1P), the first step in the metabolism of dietary fructose | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=303.90 Aligned_cols=278 Identities=18% Similarity=0.235 Sum_probs=219.2
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
.|+|+|++++|++..++ ++|..++.....+....+||++.|+|.++++ ||.++.++|
T Consensus 1 ~v~~iG~~~vD~~~~v~--------------------~~p~~~~~~~~~~~~~~~GG~a~NvA~~la~---lG~~~~~~~ 57 (290)
T cd01939 1 AVLCVGLTVLDFITTVD--------------------KYPFEDSDQRTTNGRWQRGGNASNSCTVLRL---LGLSCEFLG 57 (290)
T ss_pred CEEEEeeeeeEEEeeec--------------------CCCCCCcceEeeeeeEecCCCHHHHHHHHHH---cCCceEEEE
Confidence 48999999999999887 5677666666667788999999999999997 469999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccceEEEE
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYI 163 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~i 163 (341)
.+|+|.+|+.+++.|++.||+++++. .+...+..++++.+ +|+|+++...++...+++++++. ..++++|++|+
T Consensus 58 ~vG~D~~g~~~~~~l~~~gId~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 133 (290)
T cd01939 58 VLSRGPVFESLLDDFQSRGIDISHCYRKDIDEPASSYIIRSRAGGRTTIVNDNNLPEVTYDDFSK----IDLTQYGWIHF 133 (290)
T ss_pred eecCCHHHHHHHHHHHHcCCceeeeeEcCCCCCeeEEEEEcCCCCeEEEEeCCCCCCCCHHHHhh----hhhccCCEEEE
Confidence 99999999999999999999999974 34344544555554 67888877666666666666653 33588999999
Q ss_pred eccccccCHHHHHHHHHHHHhCC-------CeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCC
Q 019448 164 AGFFLTVSPDSIQLVAEHAAANN-------KVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDD 236 (341)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~a~~~~-------~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d 236 (341)
++.. ++...++++.+++.+ +++++|+.... +.+.++++++|++++|++|++.+ + ..+
T Consensus 134 ~g~~----~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~------~~~~~~l~~~di~~~n~~~~~~~-~-----~~~ 197 (290)
T cd01939 134 EGRN----PDETLRMMQHIEEHNNRRPEIRITISVEVEKPR------EELLELAAYCDVVFVSKDWAQSR-G-----YKS 197 (290)
T ss_pred eccC----HHHHHHHHHHHHHhcCcCCCcceEEEEEeccCc------hhhhhHHhhCCEEEEEhHHHHhc-C-----cCC
Confidence 9854 345567777777765 57888875421 23558899999999999998765 3 134
Q ss_pred HHHHHHHHhcCCccccCCccEEEEEeCCCceEEEEC-CeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCC-HHH
Q 019448 237 VEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQD-GKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKP-IEE 314 (341)
Q Consensus 237 ~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~-~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~-~~~ 314 (341)
+++++..+.. ...+++.+|||+|++|++++.+ +..+++|+++. .+++||+||||+|+|||++++++|++ +++
T Consensus 198 ~~~~~~~~~~----~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~--~~vvDt~GAGDsf~agfl~~l~~g~~~~~~ 271 (290)
T cd01939 198 PEECLRGEGP----RAKKAALLVCTWGDQGAGALGPDGEYVHSPAHKP--IRVVDTLGAGDTFNAAVIYALNKGPDDLSE 271 (290)
T ss_pred HHHHHHhhhh----hccCCcEEEEEcccCCeEEEcCCCCEEEecCCCC--CCcccCCCchHHHHHHHHHHHHcCCccHHH
Confidence 5555443211 3457889999999999999875 55678887643 36899999999999999999999995 999
Q ss_pred HHHHHHHHhhhhhhhccc
Q 019448 315 CVRAGCYTSHVIIQRSGC 332 (341)
Q Consensus 315 a~~~a~~~Aa~~v~~~g~ 332 (341)
|+++|+++|+++++++|.
T Consensus 272 a~~~a~a~aa~~i~~~G~ 289 (290)
T cd01939 272 ALDFGNRVASQKCTGVGF 289 (290)
T ss_pred HHHHHHHHHHHHHhhhcC
Confidence 999999999999999885
|
KHK can also phosphorylate several other furanose sugars. It is found in higher eukaryotes where it is believed to function as a dimer and requires K(+) and ATP to be active. In humans, hepatic KHK deficiency causes fructosuria, a benign inborn error of metabolism. |
| >PLN02543 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=318.78 Aligned_cols=312 Identities=16% Similarity=0.186 Sum_probs=227.1
Q ss_pred CceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEE
Q 019448 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~ 83 (341)
++.|+|||++++|++...... +. ++.+ -+.+ ++ ..-..........+||+++|+|+++++ ||.++.|
T Consensus 125 ~~~v~~~Ge~liDf~~~~~~~-~~--~~~~--~~~~---~~--~~~~~~~~~f~~~~GGa~aNVAvaLAR---LG~~vaf 191 (496)
T PLN02543 125 PPLVCCFGAVQKEFVPTVRVH-DN--QMHP--DMYS---QW--KMLQWDPPEFARAPGGPPSNVAISHVR---LGGRAAF 191 (496)
T ss_pred CCeEEEeChhhhhhcCCCccc-cc--cccc--cccc---cc--ccccccCCeeEeccCcHHHHHHHHHHH---CCCCEEE
Confidence 356999999999999853210 00 0000 0000 00 000012345678999999999999998 5699999
Q ss_pred EeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe--CCcccee--ecccccccCCcccCCCcchhhhhccc
Q 019448 84 IGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV--GGERSLV--ANLSAANCYKSEHLKKPENWALVEKA 158 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~--~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~ 158 (341)
+|.||+|.+|+++++.|++.||+++++. ..+..|+.+++.++ ++.+.++ ...+++..+.+++++. ..+.++
T Consensus 192 IG~VGdD~fG~~l~~~L~~~GVDts~v~~~~~~~Tgla~V~v~~~~~gr~~~~~~~~gA~~~L~~~di~~----~~l~~a 267 (496)
T PLN02543 192 MGKVGDDDFGEELVLMMNKERVQTRAVKFDENAKTACSRMKIKFRDGGKMVAETVKEAAEDSLLASELNL----AVLKEA 267 (496)
T ss_pred EEEeCCCHHHHHHHHHHHHcCCcccceEecCCCCCceEEEEEEeCCCCCEEEEecCCCHHHhCChhhcCH----hHhCCC
Confidence 9999999999999999999999999985 45667999888773 3335543 2335556777777764 568899
Q ss_pred eEEEEeccccccC--HHHHHHHHHHHHhCCCeEEEeCC--chhHH--HHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCC
Q 019448 159 KYFYIAGFFLTVS--PDSIQLVAEHAAANNKVFMMNLS--APFIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGW 232 (341)
Q Consensus 159 ~~v~i~~~~~~~~--~~~~~~~~~~a~~~~~~v~~d~~--~~~~~--~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~ 232 (341)
+++|++++.+..+ .+.+..+++.++++|+.+++|+. ...|. ....+.+.++++++|++++|++|++.|++....
T Consensus 268 ~ilh~~~~~l~~~~~~~a~~~al~~Ak~~G~~VsfDpN~R~~LW~~~~~~~~~i~~~l~~aDIl~~SeeEa~~Ltg~~~~ 347 (496)
T PLN02543 268 RMFHFNSEVLTSPSMQSTLFRAIELSKKFGGLIFFDLNLPLPLWRSRDETRELIKKAWNEADIIEVSRQELEFLLDEDYY 347 (496)
T ss_pred ceEEECChhhcCchHHHHHHHHHHHHHHCCCEEEEeCCCCccccCCHHHHHHHHHHHHHhCCEEEecHHHHHHHhCCCcc
Confidence 9999998764222 46788999999999999999986 34453 335566788999999999999999999864210
Q ss_pred ------C------------------CCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEece---ecCC
Q 019448 233 ------E------------------TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVI---VLPK 285 (341)
Q Consensus 233 ------~------------------~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~---~~~~ 285 (341)
+ ..+++.+ ..+ +..+++.||||+|++|+++++++....++.. .++
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l------~~~g~~~VVVT~G~~Ga~~~t~~~~g~v~~~~~~~v~- 419 (496)
T PLN02543 348 ERKRNYPPQYYAESFEQTKNWRDYYHYTPEEI-APL------WHDGLKLLLVTDGTLRIHYYTPKFDGVVVGTEDVLIT- 419 (496)
T ss_pred cccccccchhhhhhhhhhhcccccccCCHHHH-HHH------HHCCCCEEEEEcCCCcEEEEECCCcccccccccccCC-
Confidence 0 0123343 444 4567899999999999999976422222111 111
Q ss_pred CcccCCCCCchhhHHHHHHHHhc-------CCCHHHHHHHHHHHhhhhhhhccc--cCCCCCCC
Q 019448 286 DKLVDTNGAGDAFVGGFLSQLVQ-------EKPIEECVRAGCYTSHVIIQRSGC--TYPEKPEF 340 (341)
Q Consensus 286 ~~~vd~tGAGDaf~ag~~~~l~~-------g~~~~~a~~~a~~~Aa~~v~~~g~--~~p~~~~~ 340 (341)
..+||||||||+|+|||+++|+. ++++++|+++|+++||++|++.|+ .+|+.+|+
T Consensus 420 ~~~VDTTGAGDAF~AGfL~~Ll~~~~~~~~g~~l~ealrfAnAaaAl~vt~~GA~~~lPt~~ev 483 (496)
T PLN02543 420 PFTCDRTGSGDAVVAAIMRKLTTCPEMFEDQDVLERQLRFAVAAGIISQWTIGAVRGFPTESAT 483 (496)
T ss_pred CCCcCCCchHHHHHHHHHHHHHhccccccccccHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 13589999999999999999985 679999999999999999999998 67877664
|
|
| >TIGR02198 rfaE_dom_I rfaE bifunctional protein, domain I | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-42 Score=309.29 Aligned_cols=299 Identities=17% Similarity=0.195 Sum_probs=224.2
Q ss_pred CCCceEEEEcCceeeeEee--cChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCC
Q 019448 2 AQEGILLGMGNPLLDISSV--VDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPG 79 (341)
Q Consensus 2 ~~~~~v~~iG~~~lD~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~ 79 (341)
+++++|+++|++++|.+.. ++. + . ++.|.+ .........++|| ++|+|.++++ +|.
T Consensus 5 ~~~~~il~iG~~~iD~~~~~~~~~-----~---------~--~~~~~~--~~~~~~~~~~~GG-a~NvA~~l~~---lg~ 62 (315)
T TIGR02198 5 FKGAKVLVVGDVMLDRYWYGKVSR-----I---------S--PEAPVP--VVKVEREEDRLGG-AANVARNIAS---LGA 62 (315)
T ss_pred hCCCcEEEECceeEeeeeeecccc-----c---------C--CCCCCc--eEEEEEEEecCcH-HHHHHHHHHh---cCC
Confidence 3578999999999999976 321 0 0 011111 1233445678899 7999999997 569
Q ss_pred cEEEEeeeecCchhHHHHHHHHhcCcceeee-ecCCCCceeEEEEEeCCccceeecccccccCCcccCCC--cchhhhhc
Q 019448 80 ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYY-EDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKK--PENWALVE 156 (341)
Q Consensus 80 ~v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~-~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~ 156 (341)
++.++|.+|+|.+|+.+++.|++.||+++++ ..++.+|+.++.+.+.+.+...........++...... ......++
T Consensus 63 ~v~~i~~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 142 (315)
T TIGR02198 63 RVFLVGVVGDDEAGKRLEALLAEEGIDTSGLIRDKDRPTTTKTRVLARNQQLLRVDFEERDPINAELEARLLAAIREQLA 142 (315)
T ss_pred ceEEEEEEecchhHHHHHHHHHHCCCCcceEEECCCCCcceEEEEEcCCeEEEEecCCCCCCCCHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999999887 45566788887776643222222222111233211111 11234578
Q ss_pred cceEEEEecccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCC
Q 019448 157 KAKYFYIAGFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETD 235 (341)
Q Consensus 157 ~~~~v~i~~~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~ 235 (341)
++|+++++++.. .++++.+..+++.++++++++++|+.+.. ...++++|++++|++|++.+++. ..+.+
T Consensus 143 ~~~~v~~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~---------~~~~~~~d~l~~n~~E~~~l~~~-~~~~~ 212 (315)
T TIGR02198 143 SADAVVLSDYAKGVLTPRVVQEVIAAARKHGKPVLVDPKGKD---------FSRYRGATLITPNRKEAEAAVGA-CDTEA 212 (315)
T ss_pred hCCEEEEecCCCCccCHHHHHHHHHHHHhcCCCEEEeCCCcc---------hhhcCCCcEECCCHHHHHHHhCC-CCCHH
Confidence 999999987652 45778899999999999999999997542 13578999999999999999872 22234
Q ss_pred CHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEEC-CeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHH
Q 019448 236 DVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQD-GKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEE 314 (341)
Q Consensus 236 d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~-~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~ 314 (341)
+.+++++.+. ...|++.+|||+|++|++++++ +..+++|++++ +++||+||||+|.|||++++++|+++++
T Consensus 213 ~~~~~~~~l~-----~~~g~~~vivT~G~~G~~~~~~~~~~~~~~~~~~---~vvdt~GAGDaf~ag~~~~l~~g~~~~~ 284 (315)
T TIGR02198 213 ELVQAAEKLL-----EELDLEALLVTRSEKGMTLFTREGEPIHIPAQAR---EVYDVTGAGDTVIATLALALAAGASLEE 284 (315)
T ss_pred HHHHHHHHHH-----HHcCCCEEEEEcCCCCeEEEecCCCeEEecCCCC---CCCCCcCccHHHHHHHHHHHHcCCCHHH
Confidence 5556666652 2457899999999999999874 56778877654 8899999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhccccCCCCCCC
Q 019448 315 CVRAGCYTSHVIIQRSGCTYPEKPEF 340 (341)
Q Consensus 315 a~~~a~~~Aa~~v~~~g~~~p~~~~~ 340 (341)
|+++|+++|+++|++.|+..+.++++
T Consensus 285 al~~A~~~aa~~~~~~G~~~~~~~~~ 310 (315)
T TIGR02198 285 ACRLANAAAGVVVGKLGTATVSPAEL 310 (315)
T ss_pred HHHHHHHHhhhhhccCCCCCCCHHHH
Confidence 99999999999999999976766553
|
RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in E. coli, and separate proteins in some other genome. The longer, N-terminal domain I (this family) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (TIGR02199) adds ADP to yield ADP-D-glycero-D-manno-heptose. |
| >cd01943 MAK32 MAK32 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=307.76 Aligned_cols=288 Identities=19% Similarity=0.156 Sum_probs=222.8
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcE--EE
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGAT--SY 83 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v--~~ 83 (341)
+|+++|++++|++...+. ......+||+++|+|+++++|.+.+.++ .+
T Consensus 1 ~~~~~G~~~~d~i~~~~~------------------------------~~~~~~~GG~~~N~A~~~~~l~g~~~~~~~~~ 50 (328)
T cd01943 1 DFTTLGMFIIDEIEYPDS------------------------------EPVTNVLGGAGTYAILGARLFLPPPLSRSISW 50 (328)
T ss_pred CccccCcEEeeccccCCC------------------------------CccccccCCchhhHhhceeeecCCccccceee
Confidence 589999999999986541 2445789999999999998632322366 88
Q ss_pred EeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccceEEE
Q 019448 84 IGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFY 162 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 162 (341)
++.+|+| +|+.+++.|++.||++++.+..+.+|+.++++++ +|+|.++.+.+.+..+++++++. ..+..++++|
T Consensus 51 ~~~vG~D-~G~~l~~~L~~~GVd~~~~~~~~~~Tg~~~v~~~~~g~r~~~~~~~~~~~~~~~~l~~----~~~~~a~~~h 125 (328)
T cd01943 51 IVDKGSD-FPKSVEDELESWGTGMVFRRDPGRLTTRGLNIYDGNDRRFFKYLTPKKRIDVSDDLNS----TPLIRSSCIH 125 (328)
T ss_pred EEecCCC-CCHHHHHHHHhcCCceEEEeCCCCcchhhhhhcCCCCcceeeecCccccccccccccc----ccccCCCeEE
Confidence 9999999 9999999999999999984455667888877775 57777777667667777877764 4478899999
Q ss_pred EeccccccCHHHHHHHHHHHHh------CCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCC
Q 019448 163 IAGFFLTVSPDSIQLVAEHAAA------NNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDD 236 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~a~~------~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d 236 (341)
+.+.... ..+...++++.+++ .+.++.+|+....+....++.+.++++++|++++|++|+..+++....+...
T Consensus 126 l~~~~~~-~~~~~~~~~~~a~~~~~d~~~g~~~~~d~~~~~~~~~~~~~l~~~l~~~dil~~n~~Ea~~l~g~~~~~~~~ 204 (328)
T cd01943 126 LICSPER-CASIVDDIINLFKLLKGNSPTRPKIVWEPLPDSCDPENLEDLLQALPRVDVFSPNLEEAARLLGLPTSEPSS 204 (328)
T ss_pred EECCHHH-HHHHHHHHHHHHHhhccccCCccEEEEecCCcccChhhHHHHHHHhccCCEECCCHHHHHHHhCCCCCCccc
Confidence 9875321 22678888888888 7888989987532222234457899999999999999999998754322222
Q ss_pred HHHHHH-----HHhcCCccccCCccEEEEEeCCCceEEEE--CCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcC
Q 019448 237 VEEIAL-----KLSQWPKASEIRKRTAVITQGADPVVVAQ--DGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE 309 (341)
Q Consensus 237 ~~~~~~-----~l~~~~~~~~~~~~~vvvt~G~~G~~~~~--~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g 309 (341)
...... .+..+ ...+++.||||+|++|+++++ +++.+++|++++++.+++|||||||+|+|||+++|++|
T Consensus 205 ~~~~~~~~~~~~~~~~---~~~g~~~vvvt~G~~Ga~~~~~~~~~~~~~p~~~v~~~~vvDttGAGDaF~agfl~~l~~g 281 (328)
T cd01943 205 DEEKEAVLQALLFSGI---LQDPGGGVVLRCGKLGCYVGSADSGPELWLPAYHTKSTKVVDPTGGGNSFLGGFAAGLALT 281 (328)
T ss_pred hhhhhhhHHHHHHHhh---hccCCCEEEEEeCCCCCEEEecCCCceEecCCccCCCCcccCCCCchHHHHHHHHHHHHcC
Confidence 222111 11111 345788999999999999997 45677888776544589999999999999999999999
Q ss_pred CCHHHHHHHHHHHhhhhhhhccc
Q 019448 310 KPIEECVRAGCYTSHVIIQRSGC 332 (341)
Q Consensus 310 ~~~~~a~~~a~~~Aa~~v~~~g~ 332 (341)
+++++|+++|+++|++++++.|.
T Consensus 282 ~~~~~al~~a~a~Aa~~v~~~G~ 304 (328)
T cd01943 282 KSIDEACIYGSVAASFAIEQVGL 304 (328)
T ss_pred CCHHHHHHHHHHHHHHHHccCCC
Confidence 99999999999999999999996
|
MAK32 is a protein found primarily in fungi that is necessary for the structural stability of L-A particles. The L-A virus particule is a specialized compartment for the transcription and replication of double-stranded RNA, known to infect yeast and other fungi. MAK32 is part of the host machinery used by the virus to multiply. |
| >PRK10294 6-phosphofructokinase 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=300.20 Aligned_cols=295 Identities=18% Similarity=0.194 Sum_probs=230.0
Q ss_pred CCCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 1 ~~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
|.| -+.+.=++.+|.++.++ +++ ++...++......+||+++|+|+++++ ||.+
T Consensus 1 ~~~--i~~~~~~p~~d~~~~~~--------------------~~~-~~~~~~~~~~~~~~GG~~~NvA~~l~~---lG~~ 54 (309)
T PRK10294 1 MVR--IYTLTLAPSLDSATITP--------------------QIY-PEGKLRCSAPVFEPGGGGINVARAIAH---LGGS 54 (309)
T ss_pred CCe--EEEEecChHHeEEEEeC--------------------cee-eCCeEEeccceecCCccHHHHHHHHHH---cCCC
Confidence 444 56777999999999997 444 556667777888999999999999998 4699
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCc-chhhhhccc
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKP-ENWALVEKA 158 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~ 158 (341)
+.+++.+|+ .+|+.+++.|++.||+++++...+..++...+..+ +|++.++.+.+. .++.++++.. .....+++.
T Consensus 55 ~~~i~~vG~-~~g~~i~~~l~~~gv~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~ 131 (309)
T PRK10294 55 ATAIFPAGG-ATGEHLVSLLADENVPVATVEAKDWTRQNLHVHVEASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIESG 131 (309)
T ss_pred eEEEEEecC-ccHHHHHHHHHHcCCCceEEECCCCCeeeEEEEEcCCCcEEEEECCCC--CCCHHHHHHHHHHHHhcCCC
Confidence 999999996 79999999999999999998655444444444444 577666555443 3444443321 111346789
Q ss_pred eEEEEecccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCH
Q 019448 159 KYFYIAGFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDV 237 (341)
Q Consensus 159 ~~v~i~~~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~ 237 (341)
++++++++.+ ..+.+.+..+++.+++.|.++++|+..... ++. ..++++|++++|++|+..|++....+.+++
T Consensus 132 ~~~~i~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~----~~~--~~~~~~~~i~~n~~E~~~l~g~~~~~~~~~ 205 (309)
T PRK10294 132 AILVISGSLPPGVKLEKLTQLISAAQKQGIRCIIDSSGDAL----SAA--LAIGNIELVKPNQKELSALVNRDLTQPDDV 205 (309)
T ss_pred CEEEEeCCCCCCCCHHHHHHHHHHHHHcCCeEEEeCCCHHH----HHH--HhcCCCeEECCCHHHHHHHhCCCCCCHHHH
Confidence 9999998754 345688999999999999999999975421 111 125689999999999999987544334456
Q ss_pred HHHHHHHhcCCccccCC-ccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHH
Q 019448 238 EEIALKLSQWPKASEIR-KRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECV 316 (341)
Q Consensus 238 ~~~~~~l~~~~~~~~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~ 316 (341)
+++++.+ ++.+ ++.+|||+|++|++++++++.++++++++ +++|||||||+|+|||+++|++|+++++|+
T Consensus 206 ~~a~~~l------~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaf~ag~l~~l~~g~~~~~al 276 (309)
T PRK10294 206 RKAAQEL------VNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPV---KSQSTVGAGDSMVGAMTLKLAENASLEEMV 276 (309)
T ss_pred HHHHHHH------HHcCCCCEEEEecCCCceEEEcCCccEEEeCCCc---ccCCCcchHHHHHHHHHHHHHcCCCHHHHH
Confidence 6777777 4555 78999999999999998877777876644 789999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhccccCCCCCC
Q 019448 317 RAGCYTSHVIIQRSGCTYPEKPE 339 (341)
Q Consensus 317 ~~a~~~Aa~~v~~~g~~~p~~~~ 339 (341)
++|+++|+++|++.|+..+..++
T Consensus 277 ~~a~a~aa~~v~~~G~~~~~~~~ 299 (309)
T PRK10294 277 RFGVAAGSAATLNQGTRLCSHDD 299 (309)
T ss_pred HHHHHHHHHHhcCCCCCCCCHHH
Confidence 99999999999999997665443
|
|
| >cd01941 YeiC_kinase_like YeiC-like sugar kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=296.17 Aligned_cols=283 Identities=19% Similarity=0.262 Sum_probs=219.2
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
.|+++|++++|+++.++ +.|.+++... ......+||+++|+|+++++ +|.++.++|
T Consensus 1 ~v~~~G~~~~D~~~~~~--------------------~~~~~~~~~~-~~~~~~~GG~~~Nva~~l~~---lG~~~~~~~ 56 (288)
T cd01941 1 EIVVIGAANIDLRGKVS--------------------GSLVPGTSNP-GHVKQSPGGVGRNIAENLAR---LGVSVALLS 56 (288)
T ss_pred CeEEEEeEEEeeeeccc--------------------CccccCCCCC-eeEEEccCcHHHHHHHHHHH---hCCCcEEEE
Confidence 37999999999999877 3344433332 34678999999999999998 469999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEe-CCcccee-ecccccccCCcccCCCcchhhhhccceEEEE
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLV-ANLSAANCYKSEHLKKPENWALVEKAKYFYI 163 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~i 163 (341)
.+|+|.+|+.+++.|++.||++.++...+.+|+.++++++ +|++.+. ........++++++. .....+.+++++++
T Consensus 57 ~lG~D~~g~~i~~~L~~~gI~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~v~~ 134 (288)
T cd01941 57 AVGDDSEGESILEESEKAGLNVRGIVFEGRSTASYTAILDKDGDLVVALADMDIYELLTPDFLR--KIREALKEAKPIVV 134 (288)
T ss_pred EEecCccHHHHHHHHHHcCCccceeeeCCCCcceEEEEECCCCCEEEEEechHhhhhCCHHHHH--HHHHHHhcCCEEEE
Confidence 9999999999999999999999988666778999888876 6777652 222222233333221 12356889999998
Q ss_pred eccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHHH
Q 019448 164 AGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALK 243 (341)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~~ 243 (341)
++ ..+++.+..+++.+++.+.++++|+..... .++ +.++++++|++++|++|+..+++....+.....++++.
T Consensus 135 ~~---~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~---~~~-~~~~~~~~dii~~n~~E~~~~~~~~~~~~~~~~~~~~~ 207 (288)
T cd01941 135 DA---NLPEEALEYLLALAAKHGVPVAFEPTSAPK---LKK-LFYLLHAIDLLTPNRAELEALAGALIENNEDENKAAKI 207 (288)
T ss_pred eC---CCCHHHHHHHHHhhhhcCCcEEEEccchHH---hcc-chhhcccceEEeCCHHHHHHHhCcccCCchhHHHHHHH
Confidence 75 346778889999999999999999864221 111 11588999999999999999987543222334455566
Q ss_pred HhcCCccccCCccEEEEEeCCCceEEEEC---CeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHH
Q 019448 244 LSQWPKASEIRKRTAVITQGADPVVVAQD---GKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGC 320 (341)
Q Consensus 244 l~~~~~~~~~~~~~vvvt~G~~G~~~~~~---~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~ 320 (341)
+ ...+++.+|+|+|++|++++++ +..+++|++ ..++++||+||||+|.|||+++|++|+++++|+++|+
T Consensus 208 ~------~~~~~~~vvit~G~~Ga~~~~~~~~~~~~~~~~~--~~~~~vDttGAGDaf~a~~~~~l~~g~~~~~al~~a~ 279 (288)
T cd01941 208 L------LLPGIKNVIVTLGAKGVLLSSREGGVETKLFPAP--QPETVVNVTGAGDAFVAGLVAGLLEGMSLDDSLRFAQ 279 (288)
T ss_pred H------HHcCCcEEEEEeCCCcEEEEecCCCceeEEecCC--CCccceeCCCcHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 5 5678899999999999999986 566788863 1348999999999999999999999999999999999
Q ss_pred HHhhhhhhh
Q 019448 321 YTSHVIIQR 329 (341)
Q Consensus 321 ~~Aa~~v~~ 329 (341)
++|+++|+.
T Consensus 280 ~~Aa~~~~~ 288 (288)
T cd01941 280 AAAALTLES 288 (288)
T ss_pred HHHHHHhcC
Confidence 999999863
|
Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time. |
| >KOG2855 consensus Ribokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=288.08 Aligned_cols=298 Identities=23% Similarity=0.332 Sum_probs=239.5
Q ss_pred CCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcE
Q 019448 2 AQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGAT 81 (341)
Q Consensus 2 ~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v 81 (341)
+.++.|+|+|++..|+....+ .+|.+++..........+||.++|+|++++| ||.++
T Consensus 7 ~~~~~vv~fGs~~~D~V~~~~--------------------~~p~~ge~~~~~~f~~~~GG~~aN~Avaaar---LG~~~ 63 (330)
T KOG2855|consen 7 GEPPLVVVFGSMLIDFVPSTR--------------------RLPNAGETWEPPGFKTAPGGKGANQAVAAAR---LGGRV 63 (330)
T ss_pred cCCceEEEeccceeeeeeccc--------------------cCCCccccccCCcceecCCCcchhhhhHHHh---cCcce
Confidence 346789999999999999887 6788888888889999999999999999998 56999
Q ss_pred EEEeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccce
Q 019448 82 SYIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAK 159 (341)
Q Consensus 82 ~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 159 (341)
.|+|.||+|.||+.+.+.|++++|+++++. .++..|+...+.+. +|++.++.+.+++....++..+. ..+.+++++
T Consensus 64 afiGkvGdD~fG~~l~~~L~~~~V~~~~v~~~~~~~T~~a~i~v~~dG~~~~~~v~gan~~~~~~~se~--~~~~i~~ak 141 (330)
T KOG2855|consen 64 AFIGKVGDDEFGDDLLDILKQNGVDTSGVKFDENARTACATITVSKDGENRIIFVRGANADMLPEDSEL--NLEVIKEAK 141 (330)
T ss_pred eeeecccchhhHHHHHHHHhhCCcccccceecCCCceEEEEEEEccCCceEEEEEecCchhcCcccccc--cHHHHhhcc
Confidence 999999999999999999999999999984 67778888877775 89999988888888777665332 457899999
Q ss_pred EEEEeccccccCHHHHHHH--HHHHHhCCCeEEEeC--CchhHHH--HHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCC
Q 019448 160 YFYIAGFFLTVSPDSIQLV--AEHAAANNKVFMMNL--SAPFICE--FFKDALEKVLPYMDYIFGNETEARTFSKVQGWE 233 (341)
Q Consensus 160 ~v~i~~~~~~~~~~~~~~~--~~~a~~~~~~v~~d~--~~~~~~~--~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~ 233 (341)
++++....+...+....++ ++.+++.+..+.+|| .-+.|.. .++..+..++..+|++.++++|+..+++.
T Consensus 142 ~~~~q~ei~~~~~~~s~~~~~~~~~~~~g~~i~~~pn~~l~l~~~~~~ne~e~~~i~~~adv~~~s~~e~~fl~~~---- 217 (330)
T KOG2855|consen 142 VFHCQSEILIEEPMRSLHIAAVKVAKNAGPAIFYDPNLRLPLWDSLEENESEIASIWNMADVIKVSSQELAFLTGI---- 217 (330)
T ss_pred EEEEeeecCCcchhHHHHHhhhhhhhcccccccCCCCccccccccccccHHHHHHHhhhhhcccccHHHHHHhccC----
Confidence 9999876543333333333 346666665554444 3344442 24455777888899999999999988764
Q ss_pred CCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeE-EEeceecCCCcccCCCCCchhhHHHHHHHHhcC--C
Q 019448 234 TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLK-KFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE--K 310 (341)
Q Consensus 234 ~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~-~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g--~ 310 (341)
...+.. .| +..+.+.+|||+|++|+.||+++..- ++|++.+ ++||||||||+|+|||+.+|.+| .
T Consensus 218 --~~~~~~-~L------~~~~~k~viVTlG~kG~~y~tk~~~~~~v~~~~V---~~VDtTGAGDsFvgal~~~L~~~~~~ 285 (330)
T KOG2855|consen 218 --EDDKIL-KL------WHMKLKLVIVTLGEKGCRYYTKDFKGSHVPAFKV---KAVDTTGAGDSFVGALAVQLVRGSLL 285 (330)
T ss_pred --ccchHH-HH------hccCCCEEEEEeCCCceEEEecCCCCCCCCCccc---ccccCCCchHHHHHHHHHHHhhcccc
Confidence 122223 55 66777999999999999999887554 7887766 79999999999999999999999 6
Q ss_pred C---HHHHHHHHHHHhhhhhhhccc--cCCCCCCC
Q 019448 311 P---IEECVRAGCYTSHVIIQRSGC--TYPEKPEF 340 (341)
Q Consensus 311 ~---~~~a~~~a~~~Aa~~v~~~g~--~~p~~~~~ 340 (341)
+ +++++++|++|++++++++|. .+|..++.
T Consensus 286 ~~~~L~~~l~~A~a~~ai~v~~~Ga~~s~p~~~~~ 320 (330)
T KOG2855|consen 286 PELSLEEALRFANACGAITVQRKGAIPSMPTEKEV 320 (330)
T ss_pred chHHHHHHHHHHHHhhhHHhhccCCCccCccHHHH
Confidence 6 999999999999999999999 77876653
|
|
| >PRK09513 fruK 1-phosphofructokinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-40 Score=298.20 Aligned_cols=295 Identities=17% Similarity=0.150 Sum_probs=232.6
Q ss_pred CCCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 1 ~~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
|+.+ -.+|.=++.+|++..++ ++| .++..+..+...++||++.|+|.++++ +|.+
T Consensus 1 ~~~~-~~~~~~~p~~D~~~~~~--------------------~~~-~~~~~~~~~~~~~~GG~~~Nva~~la~---lG~~ 55 (312)
T PRK09513 1 MSRR-VATITLNPAYDLVGFCP--------------------EIE-RGEVNLVKTTGLHAAGKGINVAKVLKD---LGID 55 (312)
T ss_pred CCce-EEEEecChHHeEEEEcC--------------------cee-cCCeeeecceeecCCchHHHHHHHHHH---cCCC
Confidence 4443 44477899999999988 566 577778888899999999999999997 5699
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCC--cchhhhhcc
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKK--PENWALVEK 157 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~ 157 (341)
+.++|.+|+|.+|+. .+.|+++||++.++... ++|+.++.+++ +|+++.+...+ ..+++.+... ......+++
T Consensus 56 ~~~i~~vG~D~~~~~-~~~l~~~gv~~~~~~~~-~~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~ 131 (312)
T PRK09513 56 VTVGGFLGKDNQDGF-QQLFSELGIANRFQVVQ-GRTRINVKLTEKDGEVTDFNFSG--FEVTPADWERFVTDSLSWLGQ 131 (312)
T ss_pred eEEEEEecCccHHHH-HHHHHHcCCCccEEECC-CCCEEEEEEEeCCCcEEEEeCCC--CCCCHHHHHHHHHHHHhhcCC
Confidence 999999999999997 58899999998877554 46887777766 67777655443 2343333321 011245789
Q ss_pred ceEEEEecccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCC
Q 019448 158 AKYFYIAGFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDD 236 (341)
Q Consensus 158 ~~~v~i~~~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d 236 (341)
+|++|++++.+ ..+.+.+..+++.+++.+.++++|+.... . ...+..+.+++++|++|+..+++....+.++
T Consensus 132 ~d~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~----~---~~~~~~~~~~l~~n~~E~~~l~g~~~~~~~~ 204 (312)
T PRK09513 132 FDMVAVSGSLPRGVSPEAFTDWMTRLRSQCPCIIFDSSREA----L---VAGLKAAPWLVKPNRRELEIWAGRKLPELKD 204 (312)
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHhcCCEEEEECChHH----H---HHHhccCCeEEcCCHHHHHHHhCCCCCCHHH
Confidence 99999998754 24567888999999999999999997532 1 2234557889999999999998754333344
Q ss_pred HHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHH
Q 019448 237 VEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECV 316 (341)
Q Consensus 237 ~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~ 316 (341)
+.++++.+ .+.|++.+|||+|++|++++++++.++++++. ++++||+||||+|+|||+++|++|+++++|+
T Consensus 205 ~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~---~~~vDttGAGDaf~ag~i~~l~~g~~~~~a~ 275 (312)
T PRK09513 205 VIEAAHAL------REQGIAHVVISLGAEGALWVNASGEWIAKPPA---CDVVSTVGAGDSMVGGLIYGLLMRESSEHTL 275 (312)
T ss_pred HHHHHHHH------HHcCCCEEEEEeCCCCcEEEeCCceEEecCCC---ccccCCCChHHHHHHHHHHHHHcCCCHHHHH
Confidence 55667777 56788999999999999998877777777654 4799999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhccccCCCCCCC
Q 019448 317 RAGCYTSHVIIQRSGCTYPEKPEF 340 (341)
Q Consensus 317 ~~a~~~Aa~~v~~~g~~~p~~~~~ 340 (341)
++|+++|++++++.|..+|+.+|+
T Consensus 276 ~~A~a~Aa~~~~~~~~~~~~~~e~ 299 (312)
T PRK09513 276 RLATAVSALAVSQSNVGITDRPQL 299 (312)
T ss_pred HHHHHHHHHHhhCCCCCCCCHHHH
Confidence 999999999999999888877664
|
|
| >cd01164 FruK_PfkB_like 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-40 Score=293.86 Aligned_cols=281 Identities=21% Similarity=0.210 Sum_probs=224.7
Q ss_pred EEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEee
Q 019448 7 LLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGC 86 (341)
Q Consensus 7 v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~~ 86 (341)
..++|++++|+++.++ ++| .++..+..+....+||.++|+|.+|++ +|.+|.++|.
T Consensus 3 ~~~~~~~~~D~~~~~~--------------------~~~-~~~~~~~~~~~~~~GG~~~Nva~~la~---lG~~v~~is~ 58 (289)
T cd01164 3 YTVTLNPAIDLTIELD--------------------QLQ-PGEVNRVSSTRKDAGGKGINVARVLKD---LGVEVTALGF 58 (289)
T ss_pred EEEecChHHeEEEEcC--------------------ccc-CCceeecccccccCCcchhHHHHHHHH---cCCCeEEEEE
Confidence 4789999999999998 555 356677778889999999999999997 4699999999
Q ss_pred eecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCC--cchhhhhccceEEEE
Q 019448 87 IGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKK--PENWALVEKAKYFYI 163 (341)
Q Consensus 87 vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~v~i 163 (341)
+|+| +|+.+++.|++.||++.++... .+|+..+++.+ +++++.+...+ ..++++++.. ....+.+++++++|+
T Consensus 59 vG~D-~g~~i~~~l~~~gi~~~~~~~~-~~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i 134 (289)
T cd01164 59 LGGF-TGDFFEALLKEEGIPDDFVEVA-GETRINVKIKEEDGTETEINEPG--PEISEEELEALLEKLKALLKKGDIVVL 134 (289)
T ss_pred ccCc-hhHHHHHHHHHcCCCceEEECC-CCCEEEEEEEeCCCCEEEEeCCC--CCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 9998 8999999999999999988654 45677766665 45555554333 2344444322 011134678999999
Q ss_pred ecccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhc-CCCcEEecCHHHHHHHhhhcCCCCCCHHHHH
Q 019448 164 AGFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVL-PYMDYIFGNETEARTFSKVQGWETDDVEEIA 241 (341)
Q Consensus 164 ~~~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l-~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~ 241 (341)
++..+ ..+.+.+..+++.+++.+.++++|+.... +.+++ +++|++++|++|++.+++....+.++..+++
T Consensus 135 ~g~~~~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~--------~~~~~~~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~ 206 (289)
T cd01164 135 SGSLPPGVPADFYAELVRLAREKGARVILDTSGEA--------LLAALAAKPFLIKPNREELEELFGRPLGDEEDVIAAA 206 (289)
T ss_pred eCCCCCCcCHHHHHHHHHHHHHcCCeEEEECChHH--------HHHHHhcCCcEECCCHHHHHHHhCCCCCCHHHHHHHH
Confidence 88653 23457888999999999999999997532 22333 7999999999999999876544445667777
Q ss_pred HHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHH
Q 019448 242 LKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCY 321 (341)
Q Consensus 242 ~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~ 321 (341)
+.+ .+.+++.+|||+|++|++++.+++.+++++++. +++||+||||+|+|||+++|++|+++++|+++|++
T Consensus 207 ~~l------~~~g~~~vivt~G~~G~~~~~~~~~~~~~~~~~---~vvDttGAGDaf~a~~i~~l~~g~~~~~a~~~A~~ 277 (289)
T cd01164 207 RKL------IERGAENVLVSLGADGALLVTKDGVYRASPPKV---KVVSTVGAGDSMVAGFVAGLAQGLSLEEALRLAVA 277 (289)
T ss_pred HHH------HHcCCCEEEEecCCCCCEEEcCCcEEEecCCCc---cccCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 777 566788999999999999998877778776544 78999999999999999999999999999999999
Q ss_pred Hhhhhhhhccc
Q 019448 322 TSHVIIQRSGC 332 (341)
Q Consensus 322 ~Aa~~v~~~g~ 332 (341)
+|+++|++.|+
T Consensus 278 ~Aa~~~~~~G~ 288 (289)
T cd01164 278 AGSATAFSPGT 288 (289)
T ss_pred HHHHHhcCccC
Confidence 99999999986
|
FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis. |
| >PRK09813 fructoselysine 6-kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-40 Score=288.72 Aligned_cols=258 Identities=17% Similarity=0.241 Sum_probs=206.9
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i 84 (341)
.+|+++|++++|++...+ +.++||.+.|+|.++++ ||.++.++
T Consensus 1 ~~v~~iG~~~~D~~~~~~----------------------------------~~~~GG~~~NvA~~l~~---lG~~~~~i 43 (260)
T PRK09813 1 KKLATIGDNCVDIYPQLG----------------------------------KAFSGGNAVNVAVYCTR---YGIQPGCI 43 (260)
T ss_pred CeEEEeccceeeecccCC----------------------------------ccccCccHHHHHHHHHH---cCCcceEE
Confidence 379999999999987543 25999999999999997 46999999
Q ss_pred eeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecc-cccccCCcccCCCcchhhhhccceEEEE
Q 019448 85 GCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANL-SAANCYKSEHLKKPENWALVEKAKYFYI 163 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~v~i 163 (341)
|.+|+|.+|+++++.|++.||+++++...+.+|+.+++.+++++|++..+. +....+..++. ..+.+.+++++++
T Consensus 44 s~vG~D~~g~~i~~~l~~~gI~~~~~~~~~~~t~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~----~~~~l~~~~~v~~ 119 (260)
T PRK09813 44 TWVGDDDYGTKLKQDLARMGVDISHVHTKHGVTAQTQVELHDNDRVFGDYTEGVMADFALSEE----DYAWLAQYDIVHA 119 (260)
T ss_pred EEecCcHHHHHHHHHHHHcCCcchheeeecCCCceEEEEEeCCcEEeeccCCCcccccccCHH----HHHHHHhCCEEEE
Confidence 999999999999999999999999986555668887777667888775443 32233222211 1245788999999
Q ss_pred eccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHHH
Q 019448 164 AGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALK 243 (341)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~~ 243 (341)
+.+. ....+++.+++++.++++|+.... ..+.+..+++++|+++.|+++. ..+.+++++.
T Consensus 120 ~~~~------~~~~~~~~~~~~~~~v~~D~~~~~----~~~~~~~~~~~~d~~~~~~~~~----------~~~~~~~~~~ 179 (260)
T PRK09813 120 AIWG------HAEDAFPQLHAAGKLTAFDFSDKW----DSPLWQTLVPHLDYAFASAPQE----------DEFLRLKMKA 179 (260)
T ss_pred eccc------hHHHHHHHHHHcCCeEEEEcCCCc----cHHHHHHhCCceeEEEecCCcc----------hHHHHHHHHH
Confidence 6432 235667778899999999997542 1233567899999999886531 1235567777
Q ss_pred HhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHHHh
Q 019448 244 LSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTS 323 (341)
Q Consensus 244 l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~A 323 (341)
+ .+.+++.+|||+|++|++++++++.+++|++++ +++|||||||+|+|||++++++|+++++|+++|+++|
T Consensus 180 ~------~~~g~~~viit~G~~Ga~~~~~~~~~~~~~~~~---~~vDttGAGDaF~ag~i~~~~~g~~~~~al~~a~~~a 250 (260)
T PRK09813 180 I------VARGAGVVIVTLGENGSIAWDGAQFWRQAPEPV---TVVDTMGAGDSFIAGFLCGWLAGMTLPQAMAQGTACA 250 (260)
T ss_pred H------HHcCCCEEEEEECCCceEEEECCEEEecCCccc---CCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 6 566889999999999999999888888888765 7899999999999999999999999999999999999
Q ss_pred hhhhhhccc
Q 019448 324 HVIIQRSGC 332 (341)
Q Consensus 324 a~~v~~~g~ 332 (341)
+++++++|+
T Consensus 251 a~~~~~~G~ 259 (260)
T PRK09813 251 AKTIQYHGA 259 (260)
T ss_pred HHHHhccCC
Confidence 999999986
|
|
| >PRK13508 tagatose-6-phosphate kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-40 Score=295.82 Aligned_cols=288 Identities=18% Similarity=0.187 Sum_probs=222.3
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
-+.+..++.+|++..++ +++.. ...........+||++.|+|+++++ ||.++.++|
T Consensus 2 ~~~~t~np~~D~~~~~~--------------------~~~~~-~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~~~ 57 (309)
T PRK13508 2 ILTVTLNPSIDISYPLD--------------------ELKLD-TVNRVVDVSKTAGGKGLNVTRVLSE---FGENVLATG 57 (309)
T ss_pred EEEEecChHHeEEEEeC--------------------CeeeC-CeEEecceeecCCchHHHHHHHHHH---cCCCeEEEE
Confidence 46788999999999987 34333 2334556788999999999999997 569999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCCcccCCC--cchhhhhccceEEEE
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKK--PENWALVEKAKYFYI 163 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~v~i 163 (341)
.+|+ .+|+.+++.|++ ||+++++... ..|+.++.+.++|+|+++...++ .+.++.... ......+.++|++|+
T Consensus 58 ~vGd-~~G~~i~~~l~~-gI~~~~~~~~-~~t~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~ 132 (309)
T PRK13508 58 LIGG-ELGQFIAEHLDD-QIKHAFYKIK-GETRNCIAILHEGQQTEILEKGP--EISVQEADGFLHHFKQLLESVEVVAI 132 (309)
T ss_pred EecC-hhHHHHHHHHHc-CCCceEEECC-CCCeeeEEEEeCCCEEEEECCCC--CCCHHHHHHHHHHHHHhccCCCEEEE
Confidence 9996 689999999999 9999987654 45777777777788887765553 233322211 011245789999999
Q ss_pred eccccc-cCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCC-CCCCHHHHH
Q 019448 164 AGFFLT-VSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGW-ETDDVEEIA 241 (341)
Q Consensus 164 ~~~~~~-~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~-~~~d~~~~~ 241 (341)
+++.+. .+.+.+..+++.+++.|.++++|+.... .+.+...++++|++++|++|++.+++.... +.++..+++
T Consensus 133 ~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~-----~~~~~~~~~~~dii~~n~~E~~~l~g~~~~~~~~~~~~~~ 207 (309)
T PRK13508 133 SGSLPAGLPVDYYAQLIELANQAGKPVVLDCSGAA-----LQAVLESPYKPTVIKPNIEELSQLLGKEVSEDLDELKEVL 207 (309)
T ss_pred eCCCCCCcCHHHHHHHHHHHHHCCCEEEEECCcHH-----HHHHHhccCCceEEccCHHHHHHHhCCCCCCCHHHHHHHH
Confidence 986542 2456788899999999999999997542 122333467899999999999999874321 111233444
Q ss_pred HHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHH
Q 019448 242 LKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCY 321 (341)
Q Consensus 242 ~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~ 321 (341)
+++ ...|++.+|||+|++|++++.+++.++++++++ +++|||||||+|+|||+++|++|+++++|+++|++
T Consensus 208 ~~~------~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~Agfi~~l~~g~~~~~al~~a~a 278 (309)
T PRK13508 208 QQP------LFEGIEWIIVSLGADGAFAKHNDTFYKVDIPKI---EVVNPVGSGDSTVAGIASGLLHQEDDADLLKKANV 278 (309)
T ss_pred HHH------HHcCCCEEEEecCCCceEEEeCCceEEEeCCCc---cccCCcChhHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 444 456789999999999999998888888887654 89999999999999999999999999999999999
Q ss_pred HhhhhhhhccccCCC
Q 019448 322 TSHVIIQRSGCTYPE 336 (341)
Q Consensus 322 ~Aa~~v~~~g~~~p~ 336 (341)
+|++++++.+.....
T Consensus 279 ~aa~~~~~~~~~~~~ 293 (309)
T PRK13508 279 LGMLNAQEKQTGHVN 293 (309)
T ss_pred HHHHHhcCcCcCCCC
Confidence 999999999886444
|
|
| >TIGR03168 1-PFK hexose kinase, 1-phosphofructokinase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-40 Score=295.00 Aligned_cols=289 Identities=20% Similarity=0.211 Sum_probs=228.0
Q ss_pred EEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEeee
Q 019448 8 LGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCI 87 (341)
Q Consensus 8 ~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~~v 87 (341)
.|-=++.+|++..++ + +..++.....+....+||.+.|+|+++++ +|.++.++|.+
T Consensus 3 ~~~~~~~~D~~~~~~--------------------~-~~~~~~~~~~~~~~~~GG~~~N~a~~l~~---lg~~~~~i~~v 58 (303)
T TIGR03168 3 TVTLNPAIDLTIEVD--------------------G-LTPGEVNRVAAVRKDAGGKGINVARVLAR---LGAEVVATGFL 58 (303)
T ss_pred EEEcchHHeEEEEcC--------------------c-cccCceeecCcccccCCcchhhHHHHHHH---cCCCeEEEEEe
Confidence 345567889998887 4 34456666677889999999999999998 46999999999
Q ss_pred ecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCC--cchhhhhccceEEEEe
Q 019448 88 GKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKK--PENWALVEKAKYFYIA 164 (341)
Q Consensus 88 G~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~v~i~ 164 (341)
|+| +|+.+++.|++.||++.++... ..|+.++++.+ +|++..+...+ ..++++++.. ....+.+++++++|++
T Consensus 59 G~D-~g~~i~~~l~~~gI~~~~i~~~-~~t~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~i~ 134 (303)
T TIGR03168 59 GGF-TGEFIEALLAEEGIKNDFVEVK-GETRINVKIKESSGEETELNEPG--PEISEEELEQLLEKLRELLASGDIVVIS 134 (303)
T ss_pred CCc-hhHHHHHHHHHcCCCceEEECC-CCCEEeEEEEeCCCCEEEEeCcC--CCCCHHHHHHHHHHHHHhccCCCEEEEe
Confidence 998 7999999999999999998754 35666666665 56665554433 3455554432 0111347899999998
Q ss_pred cccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHHH
Q 019448 165 GFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALK 243 (341)
Q Consensus 165 ~~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~~ 243 (341)
++.. ..+.+.+..+++.+++++.++.+|+..... .+.+..++|++++|++|+..+++....+.++..++++.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~g~~v~~D~~~~~~-------~~~~~~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~ 207 (303)
T TIGR03168 135 GSLPPGVPPDFYAQLIAIARKRGAKVILDTSGEAL-------REALAAKPFLIKPNHEELEELFGRELKTEEEIIEAARE 207 (303)
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCEEEEECCcHHH-------HHHHhcCCcEECCCHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 8642 456788899999999999999999975421 12233579999999999999988644333455666777
Q ss_pred HhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHHHh
Q 019448 244 LSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTS 323 (341)
Q Consensus 244 l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~A 323 (341)
+ ...+++.+|||+|++|++++++++.+++|++++ +++|++||||+|+|||++++++|+++++|+++|+++|
T Consensus 208 l------~~~g~~~vviT~g~~G~~~~~~~~~~~~~~~~~---~~vDttGAGD~F~a~~~~~l~~g~~i~~a~~~A~~~a 278 (303)
T TIGR03168 208 L------LDRGAENVLVSLGADGALLVTKEGALKATPPKV---EVVNTVGAGDSMVAGFLAGLARGLSLEEALRFAVAAG 278 (303)
T ss_pred H------HHcCCCEEEEeecCCCcEEEeCCceEEeeCCcc---eeecCcCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 7 566788999999999999998888888887654 7899999999999999999999999999999999999
Q ss_pred hhhhhhccccCCCCCCC
Q 019448 324 HVIIQRSGCTYPEKPEF 340 (341)
Q Consensus 324 a~~v~~~g~~~p~~~~~ 340 (341)
+++|++.|+..|+.+|+
T Consensus 279 a~~~~~~G~~~~~~~~~ 295 (303)
T TIGR03168 279 SAAAFSPGTGLPDPEDV 295 (303)
T ss_pred HHHhcCCCcCCCCHHHH
Confidence 99999999987877653
|
This family consists largely of 1-phosphofructokinases, but also includes tagatose-6-kinases and 6-phosphofructokinases. |
| >TIGR01231 lacC tagatose-6-phosphate kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-39 Score=290.32 Aligned_cols=289 Identities=17% Similarity=0.174 Sum_probs=221.9
Q ss_pred EEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEee
Q 019448 7 LLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGC 86 (341)
Q Consensus 7 v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~~ 86 (341)
++|.=++.+|..+.++ ++|..+ ..+..+...++||++.|+|++|++ ||.++.+++.
T Consensus 2 ~~~~~~p~~d~~~~~~--------------------~~~~~~-~~~~~~~~~~~GG~~~NvA~~la~---LG~~v~~i~~ 57 (309)
T TIGR01231 2 LTVTLNPSVDISYPLT--------------------ALKLDT-VNRVQEVSKTAGGKGLNVTRVLAQ---VGDPVLASGF 57 (309)
T ss_pred EEEEcchHHeEEEEcC--------------------CeeeCc-eEeeceeeecCCccHHHHHHHHHH---cCCCeEEEEE
Confidence 4566788899988776 444444 335567888999999999999998 5699999999
Q ss_pred eecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCCcccCCC--cchhhhhccceEEEEe
Q 019448 87 IGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKK--PENWALVEKAKYFYIA 164 (341)
Q Consensus 87 vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~v~i~ 164 (341)
+|+ .+|+++++.|++.||+++++... ..|+.++.++.+|+|+++...++. +.++.... ......+.++|++|++
T Consensus 58 vG~-~~G~~i~~~l~~~GV~~~~~~~~-~~t~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~ 133 (309)
T TIGR01231 58 LGG-KLGEFIEKELDHSDIKHAFYKIS-GETRNCIAILHEGQQTEILEQGPE--ISNQEAAGFLKHFEQLLEKVEVVAIS 133 (309)
T ss_pred ecC-hhHHHHHHHHHHcCCceeEEECC-CCCEEeEEEEeCCCEEEEeCCCCC--CCHHHHHHHHHHHHHHhccCCEEEEE
Confidence 997 49999999999999999987653 357777666667888877665542 22111100 1123457899999999
Q ss_pred cccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCC-CCCCHHHHHH
Q 019448 165 GFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGW-ETDDVEEIAL 242 (341)
Q Consensus 165 ~~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~-~~~d~~~~~~ 242 (341)
++.. ..+.+.+..+++.+++++.++++|+.... .+.+.+.++++|++++|++|++.+++.... +.++..++++
T Consensus 134 g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~-----~~~~~~~~~~~dil~~n~~E~~~l~g~~~~~~~~~~~~~~~ 208 (309)
T TIGR01231 134 GSLPKGLPQDYYAQIIERCQNKGVPVVLDCSGAT-----LQTVLENPAKPTVIKPNIEELSQLLNQELTEDLESLKQALS 208 (309)
T ss_pred CCCCCCcCHHHHHHHHHHHHhCCCeEEEECChHH-----HHHHHhccCCCeEEcCCHHHHHHHhCCCCCCCHHHHHHHHH
Confidence 8753 24567888999999999999999997542 122445567899999999999999874211 1112233444
Q ss_pred HHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHHH
Q 019448 243 KLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYT 322 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~ 322 (341)
.+ ...|++.+|+|+|++|++++++++.++++++++ +++|||||||+|+|||+++|++|+++++|+++|+++
T Consensus 209 ~~------~~~g~~~vivT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~agfl~~l~~g~~~~~a~~~a~a~ 279 (309)
T TIGR01231 209 QP------LFSGIEWIIVSLGAQGAFAKHGHTFYKVNIPTI---SVVNPVGSGDSTVAGITSALLNHESDHDLLKKANTL 279 (309)
T ss_pred HH------HHcCCCEEEEccCCCceEEEeCCeeEEeeCCcc---CcCCCcchHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 44 456889999999999999998888888887654 789999999999999999999999999999999999
Q ss_pred hhhhhhhccccCCCC
Q 019448 323 SHVIIQRSGCTYPEK 337 (341)
Q Consensus 323 Aa~~v~~~g~~~p~~ 337 (341)
|++++++.+....+.
T Consensus 280 aa~~~~~~~~~~~~~ 294 (309)
T TIGR01231 280 GMLNAQEAQTGHVNL 294 (309)
T ss_pred HHHHhcCcccCCCCH
Confidence 999999888754443
|
This enzyme is part of the tagatose-6-phosphate pathway of lactose degradation. |
| >COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=274.46 Aligned_cols=288 Identities=20% Similarity=0.190 Sum_probs=244.4
Q ss_pred EEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEee
Q 019448 7 LLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGC 86 (341)
Q Consensus 7 v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~~ 86 (341)
+.+.=++.+|.+..+++ ...+++.+..+....+||+|.|||.+|+. +|.++..+|.
T Consensus 3 ~TvTLNPaiD~~~~l~~---------------------l~~g~vNr~~~~~~~aGGKGINVa~vL~~---lG~~~~a~Gf 58 (310)
T COG1105 3 YTVTLNPALDYTVFLDE---------------------LELGEVNRVRAVTKTAGGKGINVARVLKD---LGIPVTALGF 58 (310)
T ss_pred EEEecChhHhheeeccc---------------------ccccceeeeccceecCCCCceeHHHHHHH---cCCCceEEEe
Confidence 46667889999998863 45667778888899999999999999997 5699999999
Q ss_pred eecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCc--cceeecccccccCCcccCCC-c-chhhhhccceEEE
Q 019448 87 IGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGE--RSLVANLSAANCYKSEHLKK-P-ENWALVEKAKYFY 162 (341)
Q Consensus 87 vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~-~-~~~~~l~~~~~v~ 162 (341)
+|.+ .|+.+.+.|++.||...++.+. +.|+.++.+.++.+ .+-+..++ +.++++++.. . .....+.+.|+|+
T Consensus 59 lGg~-tg~~~~~~l~~~gi~~~fv~v~-g~TRinvki~~~~~~~~Tein~~G--p~is~~~~~~~l~~~~~~l~~~d~Vv 134 (310)
T COG1105 59 LGGF-TGEFFVALLKDEGIPDAFVEVK-GDTRINVKILDEEDGEETEINFPG--PEISEAELEQFLEQLKALLESDDIVV 134 (310)
T ss_pred cCCc-cHHHHHHHHHhcCCCceEEEcc-CCCeeeEEEEecCCCcEEEecCCC--CCCCHHHHHHHHHHHHHhcccCCEEE
Confidence 9996 8999999999999999998865 46999988887533 44444444 5677766655 1 2223478899999
Q ss_pred Eecccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC-CCcEEecCHHHHHHHhhhcCCCCCCHHHH
Q 019448 163 IAGFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP-YMDYIFGNETEARTFSKVQGWETDDVEEI 240 (341)
Q Consensus 163 i~~~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~-~~dvl~~n~~E~~~l~~~~~~~~~d~~~~ 240 (341)
++|+.+ .++.+.+.++++.+++.+.++.+|.+... +.+.++ ..++++||.+|++.+++....+..|..++
T Consensus 135 lsGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg~~--------L~~~L~~~P~lIKPN~~EL~~~~g~~~~~~~d~i~~ 206 (310)
T COG1105 135 LSGSLPPGVPPDAYAELIRILRQQGAKVILDTSGEA--------LLAALEAKPWLIKPNREELEALFGRELTTLEDVIKA 206 (310)
T ss_pred EeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECChHH--------HHHHHccCCcEEecCHHHHHHHhCCCCCChHHHHHH
Confidence 999764 67889999999999999999999999765 545554 48999999999999999877667788888
Q ss_pred HHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHH
Q 019448 241 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGC 320 (341)
Q Consensus 241 ~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~ 320 (341)
++.+ ...|++.|||++|++|+++.+++..++..+++ +++++++||||++.|||++++.+++++++++++|+
T Consensus 207 a~~l------~~~g~~~ViVSlG~~Gal~~~~~~~~~a~~p~---~~vvstVGAGDs~VAGf~~~~~~~~~~e~~l~~av 277 (310)
T COG1105 207 AREL------LAEGIENVIVSLGADGALLVTAEGVYFASPPK---VQVVSTVGAGDSMVAGFLAGLLKGKSLEEALRFAV 277 (310)
T ss_pred HHHH------HHCCCCEEEEEecCcccEEEccCCeEEEeCCC---cceecCcCchHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 8887 78899999999999999999999999888554 49999999999999999999999999999999999
Q ss_pred HHhhhhhhhccccCCCCCC
Q 019448 321 YTSHVIIQRSGCTYPEKPE 339 (341)
Q Consensus 321 ~~Aa~~v~~~g~~~p~~~~ 339 (341)
++|+.++++.+...|+.++
T Consensus 278 A~g~a~~~~~~~~~~~~~~ 296 (310)
T COG1105 278 ACGAAAASQKGTGIPDLDQ 296 (310)
T ss_pred HHHHHHhhcCCCCCCCHHH
Confidence 9999999999998887763
|
|
| >PRK11316 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-38 Score=299.73 Aligned_cols=297 Identities=14% Similarity=0.131 Sum_probs=219.4
Q ss_pred CCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEE
Q 019448 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATS 82 (341)
Q Consensus 3 ~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~ 82 (341)
...+|+|+|++++|++..++-+++ . .+.+............+|| ++|+|.++++ ||.++.
T Consensus 9 ~~~~ilviG~~~lD~~~~~~~~~~------------~----~~~~~~~~~~~~~~~~~GG-a~NvA~~la~---LG~~v~ 68 (473)
T PRK11316 9 ERAGVLVVGDVMLDRYWYGPTSRI------------S----PEAPVPVVKVNQIEERPGG-AANVAMNIAS---LGAQAR 68 (473)
T ss_pred CCCcEEEECccEEeeeeeccccee------------C----CCCCCCEEEeeeEEecCcH-HHHHHHHHHH---cCCcEE
Confidence 356899999999999987641100 0 0111123445567788999 6999999997 569999
Q ss_pred EEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeeccc-ccccCCcccCCCcchhhhhccceEE
Q 019448 83 YIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLS-AANCYKSEHLKKPENWALVEKAKYF 161 (341)
Q Consensus 83 ~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~v 161 (341)
++|.+|+|.+|+.+++.|++.||+++++...+.+|+.++.+++.+......... ....+.++.+.. .....+.+++++
T Consensus 69 ~i~~vG~D~~g~~i~~~L~~~gI~~~~v~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~l~~~~~v 147 (473)
T PRK11316 69 LVGLTGIDEAARALSKLLAAVGVKCDFVSVPTHPTITKLRVLSRNQQLIRLDFEEGFEGVDPQPLLE-RIEQALPSIGAL 147 (473)
T ss_pred EEEEEcCCHHHHHHHHHHHHcCCceeEEEcCCCCCCeeEEEEeCCceEEecccccCCCchhHHHHHH-HHHHHhccCCEE
Confidence 999999999999999999999999998876666788887777643332221111 111122222211 123457899999
Q ss_pred EEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHH
Q 019448 162 YIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIA 241 (341)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~ 241 (341)
+++++... ..+.+..+++.+++++.++++||.... ...++++|++++|++|++.+++.. .+.++..+.+
T Consensus 148 ~is~~~~~-~~~~~~~~~~~~k~~g~~vv~Dp~~~~---------~~~~~~~dil~pN~~Ea~~l~g~~-~~~~~~~~~~ 216 (473)
T PRK11316 148 VLSDYAKG-ALASVQAMIQLARKAGVPVLIDPKGTD---------FERYRGATLLTPNLSEFEAVVGKC-KDEAELVEKG 216 (473)
T ss_pred EEecCCcc-chhHHHHHHHHHHhcCCeEEEeCCCCC---------ccccCCCeEECcCHHHHHHHhCCC-CCHHHHHHHH
Confidence 99865432 235678899999999999999997532 134678999999999999998731 1112233344
Q ss_pred HHHhcCCccccCCccEEEEEeCCCceEEEECCe-eEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHH
Q 019448 242 LKLSQWPKASEIRKRTAVITQGADPVVVAQDGK-LKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGC 320 (341)
Q Consensus 242 ~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~-~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~ 320 (341)
+.+. ...|++.++||+|++|++++++++ .+++|++++ +++||+||||+|.|||+++|++|+++++|+++|+
T Consensus 217 ~~l~-----~~~g~~~vvVT~G~~G~~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~aa~~~~l~~g~~~~~al~~A~ 288 (473)
T PRK11316 217 MKLI-----ADYDLSALLVTRSEQGMTLLQPGKAPLHLPTQAR---EVYDVTGAGDTVISVLAAALAAGNSLEEACALAN 288 (473)
T ss_pred HHHH-----HhcCCCEEEEEecCCCcEEEecCCceEEecCcCC---CCCCCCCCcHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 4442 356789999999999999887665 477777654 8899999999999999999999999999999999
Q ss_pred HHhhhhhhhccccCCCCCC
Q 019448 321 YTSHVIIQRSGCTYPEKPE 339 (341)
Q Consensus 321 ~~Aa~~v~~~g~~~p~~~~ 339 (341)
++|++++++.|+..|+.++
T Consensus 289 a~Aa~~v~~~G~~~~~~~~ 307 (473)
T PRK11316 289 AAAGVVVGKLGTSTVSPIE 307 (473)
T ss_pred HHHHhhcccCCCccCCHHH
Confidence 9999999999997666554
|
|
| >cd01946 ribokinase_group_C Ribokinase-like subgroup C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=268.79 Aligned_cols=266 Identities=20% Similarity=0.279 Sum_probs=203.6
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
.|+|+|++++|++.... ......+||++.|+|.++++| | ++.++|
T Consensus 1 ~v~~~G~~~~D~~~~~~-------------------------------~~~~~~~GG~a~N~a~~la~l---g-~v~~i~ 45 (277)
T cd01946 1 SLLVVGSVAFDAIETPF-------------------------------GKVDKALGGSATYFSLSASYF---T-DVRLVG 45 (277)
T ss_pred CeEEEEEeeeeeecCCC-------------------------------ceeeeccCchHHHHHHHHHHh---c-cceeEE
Confidence 37999999999994221 113467899999999999984 4 599999
Q ss_pred eeecCchhHHHHHHHHhcCcceeeeec-CCCCceeEEEEE--e-CCccceeecccccccCCcccCCCcchhhhhccceEE
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYYED-ESASTGTCAVCV--V-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYF 161 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~-~~~~t~~~~~~~--~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 161 (341)
.+|+| +|+.+++.|+++||+++++.. ++..|....... + +++++.....+....+.++ ....+.+++++
T Consensus 46 ~vG~D-~g~~~~~~l~~~gi~~~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~v 118 (277)
T cd01946 46 VVGED-FPEEDYKLLNSHNIVTLGLLSKEDGKTFHWAGRYHYDLNEADTLDTDLNVFADFDPQ------LPEHYKDSEFV 118 (277)
T ss_pred eccCc-ChHHHHHHHHhccCcceeEEEecCCCeEEEeeEehhhcccccchhhhhhHHhhcCCC------ChHHhhcCCEE
Confidence 99999 899999999999999998854 444442211110 0 2223322222211222221 12457889999
Q ss_pred EEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHH
Q 019448 162 YIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIA 241 (341)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~ 241 (341)
|+++ ++++....+++.+++. .++++|+. ..|.....+.++++++++|++++|++|++.+++ .+++++++
T Consensus 119 ~~~~----~~~~~~~~~~~~~~~~-~~v~~D~~-~~~~~~~~~~~~~~l~~~d~~~~n~~E~~~l~g-----~~~~~~~~ 187 (277)
T cd01946 119 FLGN----IAPELQREVLEQVKDP-KLVVMDTM-NFWISIKPEKLKKVLAKVDVVIINDGEARQLTG-----AANLVKAA 187 (277)
T ss_pred EECC----CCHHHHHHHHHHHHhC-CEEEEccH-HHhhhhhHHHHHHHhccCCEEeCCHHHHHHHhC-----CchHHHHH
Confidence 9975 3567778888888877 78999984 345433456688899999999999999999976 24677888
Q ss_pred HHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCC-----CHHHHH
Q 019448 242 LKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK-----PIEECV 316 (341)
Q Consensus 242 ~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~-----~~~~a~ 316 (341)
+.+ .+.+++.+|+|+|.+|++++++++.+++|+++++ +++|||||||+|.|||+++|++++ ++++|+
T Consensus 188 ~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~--~~vDttGAGDaF~Agfl~~l~~~~~~~~~~~~~a~ 259 (277)
T cd01946 188 RLI------LAMGPKALIIKRGEYGALLFTDDGYFAAPAYPLE--SVFDPTGAGDTFAGGFIGYLASQKDTSEANMRRAI 259 (277)
T ss_pred HHH------HHcCCCEEEEecCCCcEEEEECCceEEcCCcccC--ccCCCCCchHHHHHHHHHHHHhCCCcchhhHHHHH
Confidence 888 6678899999999999999988888888876542 478999999999999999999884 699999
Q ss_pred HHHHHHhhhhhhhccc
Q 019448 317 RAGCYTSHVIIQRSGC 332 (341)
Q Consensus 317 ~~a~~~Aa~~v~~~g~ 332 (341)
++|+++|+++|++.|+
T Consensus 260 ~~a~~~aa~~~~~~G~ 275 (277)
T cd01946 260 IYGSAMASFCVEDFGT 275 (277)
T ss_pred HHhHHHHhhhhhhcCC
Confidence 9999999999999996
|
Found only in bacteria, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. |
| >cd01937 ribokinase_group_D Ribokinase-like subgroup D | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=259.38 Aligned_cols=251 Identities=16% Similarity=0.118 Sum_probs=192.9
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
+|+++|++++|++...+ +....+||++.|+|.++++ +|.++.++|
T Consensus 1 ~il~iG~~~iD~~~~~~--------------------------------~~~~~~GG~~~Nva~~la~---lG~~~~~i~ 45 (254)
T cd01937 1 KIVIIGHVTIDEIVTNG--------------------------------SGVVKPGGPATYASLTLSR---LGLTVKLVT 45 (254)
T ss_pred CeEEEcceeEEEEecCC--------------------------------ceEEecCchhhhHHHHHHH---hCCCeEEEE
Confidence 68999999999997432 2467899999999999997 469999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccceEEEEe
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIA 164 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~i~ 164 (341)
.+|+|.+|+ ++.|+++||++..+. ...|+.+.+..+ +|++.++.+.+........ ...+.++|++|++
T Consensus 46 ~vG~D~~g~--~~~l~~~gv~~~~~~--~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 114 (254)
T cd01937 46 KVGRDYPDK--WSDLFDNGIEVISLL--STETTTFELNYTNEGRTRTLLAKCAAIPDTES-------PLSTITAEIVILG 114 (254)
T ss_pred eeCCCchHH--HHHHHHCCcEEEEec--CCCeEEEEEEecCCCCeeeeeccccCCccccc-------ccccCcccEEEEC
Confidence 999999999 688999999975443 234555545554 5677766655533222111 1247889999997
Q ss_pred ccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHH--HHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHH
Q 019448 165 GFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICE--FFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL 242 (341)
Q Consensus 165 ~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~--~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~ 242 (341)
+. +++....+.+.+ .++++|+... |.. .....+.++++++|++++|++|++.+ .+++++++
T Consensus 115 ~~----~~~~~~~~~~~~----~~v~~D~~~~-~~~~~~~~~~~~~~l~~~di~~~n~~E~~~~--------~~~~~~~~ 177 (254)
T cd01937 115 PV----PEEISPSLFRKF----AFISLDAQGF-LRRANQEKLIKCVILKLHDVLKLSRVEAEVI--------STPTELAR 177 (254)
T ss_pred CC----cchhcHHHHhhh----hheeEccccc-eeeccccchHHHhhcccCcEEEEcHHHHhhc--------CCHHHHHH
Confidence 64 344444443332 6888898643 211 11222568899999999999999873 35778888
Q ss_pred HHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHHH
Q 019448 243 KLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYT 322 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~ 322 (341)
.+ ...|++.+|||+|++|++++++++.+++++++. +++|||||||+|+|||++++++|+++++|+++|+++
T Consensus 178 ~l------~~~g~~~vvvt~g~~g~~~~~~~~~~~~~~~~~---~~vdt~GAGD~f~a~~~~~l~~g~~~~~a~~~a~~~ 248 (254)
T cd01937 178 LI------KETGVKEIIVTDGEEGGYIFDGNGKYTIPASKK---DVVDPTGAGDVFLAAFLYSRLSGKDIKEAAEFAAAA 248 (254)
T ss_pred HH------HHcCCCEEEEeeCCcceEEEECCccEEccccCc---eeccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 87 567889999999999999998888888887654 789999999999999999999999999999999999
Q ss_pred hhhhhh
Q 019448 323 SHVIIQ 328 (341)
Q Consensus 323 Aa~~v~ 328 (341)
|+++|+
T Consensus 249 aa~~i~ 254 (254)
T cd01937 249 AAKFIE 254 (254)
T ss_pred HHHHhC
Confidence 999874
|
Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. |
| >PLN02630 pfkB-type carbohydrate kinase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=266.97 Aligned_cols=254 Identities=19% Similarity=0.239 Sum_probs=203.9
Q ss_pred CCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEE
Q 019448 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATS 82 (341)
Q Consensus 3 ~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~ 82 (341)
+.++|+++|++++|++..+++ .....+||+++|+|.++++ ||.++.
T Consensus 10 ~~~~vlvvG~~~~D~i~~~g~-------------------------------~~~~~~GG~a~N~A~alar---LG~~~~ 55 (335)
T PLN02630 10 PQRRVLIVGNYCHDVLIQNGS-------------------------------VTAESLGGAASFISNVLDA---LSVECE 55 (335)
T ss_pred CCCCEEEEeeeeeeEEEeCCc-------------------------------EEEEecCcHHHHHHHHHHH---cCCceE
Confidence 567999999999999986531 1357899999999999998 569999
Q ss_pred EEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeC------CccceeecccccccCCcccCCCcchhhhhc
Q 019448 83 YIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVG------GERSLVANLSAANCYKSEHLKKPENWALVE 156 (341)
Q Consensus 83 ~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~------g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 156 (341)
++|.+|+|.. .+++...+..++.+|+.+++++++ ++++++...+++..+++++++. ..+.
T Consensus 56 lis~VG~D~~----------~~v~~~~~~~~~~~T~~~~~~~~~g~~~~~~e~~i~~~~ga~~~l~~~di~~----~~~~ 121 (335)
T PLN02630 56 LVSKVGPDFL----------YQVSHPPIVIPDSKTTEFHADFDQGIDGNGHEDRVLKRVCACDPIEPSDIPD----MRYE 121 (335)
T ss_pred EEEEecCCcc----------ccccccceecCCCCceEEEEEEcCCcccCCCCeEEEEeccccCCCChHHCCH----HHhc
Confidence 9999999953 267665454466678888877754 3778888889999999999874 2467
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHh-----CCCeEEEeCCch---hHHHHHHHHHHhhcCCCcEEecCHHHHHHHhh
Q 019448 157 KAKYFYIAGFFLTVSPDSIQLVAEHAAA-----NNKVFMMNLSAP---FICEFFKDALEKVLPYMDYIFGNETEARTFSK 228 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~a~~-----~~~~v~~d~~~~---~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~ 228 (341)
..+++++.+ +.+++....+++.++. +++.+.+|+... .|. .....+.++++++|++++|++|+..+
T Consensus 122 ~~~~~~l~~---ei~~e~~~~~~~~a~~v~~D~~g~~~~~Dp~~~~~~~~~-~~~~~~~~~L~~iDil~~ne~Ea~~l-- 195 (335)
T PLN02630 122 FGMAVGVAG---EILPETLERMVEICDVVVVDIQALIRVFDPVDGTVKLVK-LEETGFYDMLPRIGFLKASSEEALFI-- 195 (335)
T ss_pred ccceeeecC---CCcHHHHHHHHHHhhhheeccCceEEecCCcccccccch-hhHHHHHHHHHhCCEEEecHHHHhhc--
Confidence 778888854 4567889999998988 788899999752 111 01123568899999999999999875
Q ss_pred hcCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhc
Q 019448 229 VQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQ 308 (341)
Q Consensus 229 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~ 308 (341)
+.+++. + ...+|||+|++|++++++++.+++|++++ +++|||||||+|+|||++++++
T Consensus 196 -------~~~~~~----------~--~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vDttGAGDaF~agfi~~l~~ 253 (335)
T PLN02630 196 -------DVEEVR----------Q--KCCVIVTNGKKGCRIYWKDGEMRVPPFPA---IQVDPTGAGDSFLGGFVAGLVQ 253 (335)
T ss_pred -------CHHHHc----------c--CCEEEEEECCCceEEEECCeeEEeCCCCC---CCCCCCChHHHHHHHHHHHHHc
Confidence 222221 1 13799999999999999888888887755 7899999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhhhhhhccc
Q 019448 309 EKPIEECVRAGCYTSHVIIQRSGC 332 (341)
Q Consensus 309 g~~~~~a~~~a~~~Aa~~v~~~g~ 332 (341)
|+++++|+++|+++|++++++.|.
T Consensus 254 g~~~~~a~~~A~a~aa~~v~~~G~ 277 (335)
T PLN02630 254 GLAVPDAALLGNYFGSLAVEQVGI 277 (335)
T ss_pred CCCHHHHHHHHHHHHHHHhCcCCC
Confidence 999999999999999999999996
|
|
| >COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=256.44 Aligned_cols=296 Identities=16% Similarity=0.169 Sum_probs=233.2
Q ss_pred CceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEE
Q 019448 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~ 83 (341)
+.+|+|+|++++|.|+..+-+++ ....+-.++.......++|| |+|+|.+++. ||.++.+
T Consensus 10 ~~kVLVvGDvmLDrY~~G~~~RI----------------SPEAPVPVv~v~~e~~rlGG-AaNVa~Nias---LGa~a~l 69 (467)
T COG2870 10 QAKVLVVGDVMLDRYWYGKVSRI----------------SPEAPVPVVKVEKEEERLGG-AANVAKNIAS---LGANAYL 69 (467)
T ss_pred CCcEEEEcceeeeeecccccccc----------------CCCCCCceEEeccccccccc-HHHHHHHHHH---cCCCEEE
Confidence 46899999999999999885544 33456677788888999999 8899999986 5699999
Q ss_pred EeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCC-cccCCCcchhhhhccceEEE
Q 019448 84 IGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYK-SEHLKKPENWALVEKAKYFY 162 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~v~ 162 (341)
+|.+|+|..|+.+...|...+++..++..+..+|.....++...+.-+..+.-...... ...+. ..+...+.+.|+++
T Consensus 70 ~GvvG~Deag~~L~~~l~~~~i~~~l~~~~~r~T~~K~Rv~s~nQQllRvD~Ee~~~~~~~~~ll-~~~~~~l~~~~~vV 148 (467)
T COG2870 70 VGVVGKDEAGKALIELLKANGIDSDLLRDKNRPTIVKLRVLSRNQQLLRLDFEEKFPIEDENKLL-EKIKNALKSFDALV 148 (467)
T ss_pred EEeeccchhHHHHHHHHHhcCcccceEeecCCCceeeeeeecccceEEEecccccCcchhHHHHH-HHHHHHhhcCCEEE
Confidence 99999999999999999999999888888888888877777544433322211111111 11111 22446789999999
Q ss_pred EeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHH
Q 019448 163 IAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL 242 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~ 242 (341)
++.|.-..-.. ...+++.|+++++++.+||.+..+ +.+..+.++.||..|++...+.+..+ ++..+..+
T Consensus 149 LSDY~KG~L~~-~q~~I~~ar~~~~pVLvDPKg~Df---------~~Y~GAtLiTPN~~E~~~~vg~~~~e-~el~~~g~ 217 (467)
T COG2870 149 LSDYAKGVLTN-VQKMIDLAREAGIPVLVDPKGKDF---------EKYRGATLITPNLKEFEEAVGKCKSE-EELEERGQ 217 (467)
T ss_pred Eeccccccchh-HHHHHHHHHHcCCcEEECCCCcch---------hhhCCCeecCCCHHHHHHHHcccccH-HHHHHHHH
Confidence 99987433222 889999999999999999987542 45778999999999999998876433 33445455
Q ss_pred HHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHHH
Q 019448 243 KLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYT 322 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~ 322 (341)
+|. .+.+...++||++++|+.+++.++..|+|+..- ++.|.|||||+.+|.+..+|+.|.+++||+.+||++
T Consensus 218 kL~-----~~~~L~alLvTRsE~GMtL~~~~~~~h~pt~Ak---EVyDVTGAGDTVIa~la~~laaG~s~~eAc~lAN~A 289 (467)
T COG2870 218 KLK-----EELDLSALLVTRSEKGMTLFQEGKPLHFPARAK---EVYDVTGAGDTVIAVLAAALAAGASLEEACELANAA 289 (467)
T ss_pred HHH-----HhhCcceEEEEeccCCceeecCCcccccchhhe---eeeeccCCCchHHHHHHHHHHcCCCHHHHHHHhhhh
Confidence 553 345678999999999999999888888887643 899999999999999999999999999999999999
Q ss_pred hhhhhhhccccCCCCCC
Q 019448 323 SHVIIQRSGCTYPEKPE 339 (341)
Q Consensus 323 Aa~~v~~~g~~~p~~~~ 339 (341)
|+.++.+.|...-+.+|
T Consensus 290 agiVVgKlGTatvs~~E 306 (467)
T COG2870 290 AGIVVGKLGTATVSPEE 306 (467)
T ss_pred cceEEeeccceeecHHH
Confidence 99999999996544444
|
|
| >KOG2947 consensus Carbohydrate kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=230.18 Aligned_cols=290 Identities=17% Similarity=0.250 Sum_probs=231.0
Q ss_pred CCCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 1 ~~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
|..++.|+|.|.+.+|.+..+| +.|..+...+-.+..++.||.+.|++.+++. ||.+
T Consensus 1 m~~~k~VLcVG~~~lD~iTivd--------------------~~~fe~~~~r~~~g~wqRgG~asNvcTvlrl---LG~~ 57 (308)
T KOG2947|consen 1 MEEPKQVLCVGCTVLDVITIVD--------------------KYPFEDSEIRCLSGRWQRGGNASNVCTVLRL---LGAP 57 (308)
T ss_pred CCCcceEEEeccEEEEEEEecc--------------------CCCCCccceehhhhhhhcCCCcchHHHHHHH---hCCc
Confidence 6777899999999999999998 6788888888888899999999999999995 4699
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEe--CCccceeecccccccCCcccCCCcchhhhhccc
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV--GGERSLVANLSAANCYKSEHLKKPENWALVEKA 158 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 158 (341)
+.|+|.+.....-+++++.|++.||+++++...+...+...++++ .|.|+++......+..+.+++.+ -.+..+
T Consensus 58 cef~Gvlsr~~~f~~lLddl~~rgIdishcpftd~~pp~ssiI~~r~s~trTil~~dks~p~vT~~dF~k----vdl~qy 133 (308)
T KOG2947|consen 58 CEFFGVLSRGHVFRFLLDDLRRRGIDISHCPFTDHSPPFSSIIINRNSGTRTILYCDKSLPDVTATDFEK----VDLTQY 133 (308)
T ss_pred hheeeecccchhHHHHHHHHHhcCCCcccCccccCCCCcceEEEecCCCceEEEEecCCCccccHHHhhh----ccccee
Confidence 999999999888899999999999999998654445556556664 57888888878888888888875 458899
Q ss_pred eEEEEeccccccCHHHHHHHHHHHHh----CCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCC
Q 019448 159 KYFYIAGFFLTVSPDSIQLVAEHAAA----NNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWET 234 (341)
Q Consensus 159 ~~v~i~~~~~~~~~~~~~~~~~~a~~----~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~ 234 (341)
.|+|+.+..+......+..+++.-.+ .++.+.+|+-.+ ++.+.++...+|+++.+++=++.+.-
T Consensus 134 ~WihfE~Rnp~etlkM~~~I~~~N~r~pe~qrI~vSvd~en~------req~~~l~am~DyVf~sK~~a~~~gf------ 201 (308)
T KOG2947|consen 134 GWIHFEARNPSETLKMLQRIDAHNTRQPEEQRIRVSVDVENP------REQLFQLFAMCDYVFVSKDVAKHLGF------ 201 (308)
T ss_pred eeEEEecCChHHHHHHHHHHHHhhcCCCccceEEEEEEecCc------HHHHHHHhhcccEEEEEHHHHhhhcc------
Confidence 99999985422222233333332222 335578888654 35678899999999999998887642
Q ss_pred CCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEE-ECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHH-hcCCCH
Q 019448 235 DDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVA-QDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQL-VQEKPI 312 (341)
Q Consensus 235 ~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~-~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l-~~g~~~ 312 (341)
.+++++++.+..-.+ ++..-+.+|+-++++|+-.. .+|+.+++++++.| ++||+.|+||+|.|||||++ ..+.++
T Consensus 202 ks~rea~~~l~~r~~-~~~pkpv~I~~w~~eGA~~l~adg~yfev~a~~pp--kvVD~lg~~DtF~A~vIyA~lk~~r~l 278 (308)
T KOG2947|consen 202 KSPREACEGLYGRVP-KGKPKPVLICPWASEGAGALGADGKYFEVDAFKPP--KVVDTLGAGDTFNAGVIYALLKQGRSL 278 (308)
T ss_pred CCHHHHHHHHHhhcc-cCCCCcEEEeccccccccccCCCCCEEecCCCCCc--cceeeccCCCcchHHHHHHHHHhhhhH
Confidence 468888888744322 23333568888999998554 56788999998654 99999999999999999995 568999
Q ss_pred HHHHHHHHHHhhhhhhhccc
Q 019448 313 EECVRAGCYTSHVIIQRSGC 332 (341)
Q Consensus 313 ~~a~~~a~~~Aa~~v~~~g~ 332 (341)
.||+.||+++|++++...|.
T Consensus 279 ~eAvdfg~rvas~Kl~g~Gf 298 (308)
T KOG2947|consen 279 AEAVDFGNRVASKKLGGQGF 298 (308)
T ss_pred HHHHHHHHHhhhcccccccc
Confidence 99999999999999999987
|
|
| >cd00287 ribokinase_pfkB_like ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.3e-29 Score=210.24 Aligned_cols=195 Identities=27% Similarity=0.360 Sum_probs=161.0
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
+|+++|++.+|.+..++ ++|..++..+..+....+||.+.|+|.++++ ||.++.++|
T Consensus 1 ~v~~iG~~~~D~~~~~~--------------------~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~---LG~~~~~~~ 57 (196)
T cd00287 1 RVLVVGSLLVDVILRVD--------------------ALPLPGGLVRPGDTEERAGGGAANVAVALAR---LGVSVTLVG 57 (196)
T ss_pred CEEEEccceEEEEEEec--------------------cCCCCCCeEEeceeeecCCCcHHHHHHHHHH---CCCcEEEEE
Confidence 48999999999999987 5677788888888999999999999999997 569999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccceEEEEec
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAG 165 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~i~~ 165 (341)
+|++|+++
T Consensus 58 ------------------------------------------------------------------------~~~v~i~~ 65 (196)
T cd00287 58 ------------------------------------------------------------------------ADAVVISG 65 (196)
T ss_pred ------------------------------------------------------------------------ccEEEEec
Confidence 78999998
Q ss_pred cccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHHHHh
Q 019448 166 FFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLS 245 (341)
Q Consensus 166 ~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~~l~ 245 (341)
..+. .+.+.++++.+++.+.++++|+........ .+.+.++++++|++++|++|++.+++....+.++..++++.+
T Consensus 66 ~~~~--~~~~~~~~~~~~~~~~~v~~D~~~~~~~~~-~~~~~~~~~~~dvl~~n~~E~~~l~~~~~~~~~~~~~~~~~l- 141 (196)
T cd00287 66 LSPA--PEAVLDALEEARRRGVPVVLDPGPRAVRLD-GEELEKLLPGVDILTPNEEEAEALTGRRDLEVKEAAEAAALL- 141 (196)
T ss_pred ccCc--HHHHHHHHHHHHHcCCeEEEeCCccccccc-cchHHHHHhhCCEECCCHHHHHHHhCCCCCChHHHHHHHHHH-
Confidence 6532 478888999999999999999986532211 122567899999999999999999875443333455677777
Q ss_pred cCCccccCCccEEEEEeCCCceEEEE-CCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHh
Q 019448 246 QWPKASEIRKRTAVITQGADPVVVAQ-DGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLV 307 (341)
Q Consensus 246 ~~~~~~~~~~~~vvvt~G~~G~~~~~-~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~ 307 (341)
...+++.+|+|+|++|+.+++ ++..+++|+++. +++||+||||+|+|||+++++
T Consensus 142 -----~~~g~~~vvvt~G~~g~~~~~~~~~~~~~~~~~~---~~vdt~GAGD~f~ag~~~~l~ 196 (196)
T cd00287 142 -----LSKGPKVVIVTLGEKGAIVATRGGTEVHVPAFPV---KVVDTTGAGDAFLAALAAGLA 196 (196)
T ss_pred -----HhcCCCEEEEEECCCccEEEecCCceEEcCCccC---CcccCCCchHHHHHHHHHHhC
Confidence 667889999999999999998 777777776543 789999999999999999874
|
The superfamily includes ribokinase, fructokinase, ketohexokinase, 2-dehydro-3-deoxygluconokinase, 1-phosphofructokinase, the minor 6-phosphofructokinase (PfkB), inosine-guanosine kinase, and adenosine kinase. Even though there is a high degree of structural conservation within this superfamily, their multimerization level varies widely, monomeric (e.g. adenosine kinase), dimeric (e.g. ribokinase), and trimeric (e.g THZ kinase). |
| >cd01173 pyridoxal_pyridoxamine_kinase Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5'-phosphate (PLP), by catalyzing the phosphorylation of the precursor vitamin B6 in the presence of Zn2+ and ATP | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.9e-19 Score=156.95 Aligned_cols=165 Identities=15% Similarity=0.162 Sum_probs=125.3
Q ss_pred ccceEEEEeccc-cccCHHHHHHHHHHHHhC--CCeEEEeCC----chhH--HHHHHHHHHhhcC-CCcEEecCHHHHHH
Q 019448 156 EKAKYFYIAGFF-LTVSPDSIQLVAEHAAAN--NKVFMMNLS----APFI--CEFFKDALEKVLP-YMDYIFGNETEART 225 (341)
Q Consensus 156 ~~~~~v~i~~~~-~~~~~~~~~~~~~~a~~~--~~~v~~d~~----~~~~--~~~~~~~~~~~l~-~~dvl~~n~~E~~~ 225 (341)
...+++. .|+. .....+.+.++++.++++ +.++++||. ...| .+...+.+++++. ++|++++|.+|++.
T Consensus 71 ~~~~~v~-~G~l~~~~~~~~~~~~l~~~~~~~~~~~vv~Dpv~~~~~~~~~~~~~~~~~~~~~l~~~~dvi~pN~~Ea~~ 149 (254)
T cd01173 71 LEYDAVL-TGYLGSAEQVEAVAEIVKRLKEKNPNLLYVCDPVMGDNGKLYVVAEEIVPVYRDLLVPLADIITPNQFELEL 149 (254)
T ss_pred ccCCEEE-EecCCCHHHHHHHHHHHHHHHHhCCCceEEECCCCCcCCcceecChhHHHHHHHHHHhcCCEECCcHHHHHH
Confidence 4567775 4443 233457788888888877 889999993 2222 2334556777776 99999999999999
Q ss_pred HhhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCC------ceEEEECCeeEEEeceecCCCcccCCCCCchhhH
Q 019448 226 FSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGAD------PVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFV 299 (341)
Q Consensus 226 l~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~------G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ 299 (341)
+++....+.++.+++++++ .+.|++.|+||.|.. |++++++++.+.++.+.+ +. ++|++||||+|+
T Consensus 150 l~g~~~~~~~~~~~~~~~l------~~~g~~~Vvit~g~~~~~~~~g~~~~~~~~~~~~~~~~~-~~-~~~~~GaGD~f~ 221 (254)
T cd01173 150 LTGKKINDLEDAKAAARAL------HAKGPKTVVVTSVELADDDRIEMLGSTATEAWLVQRPKI-PF-PAYFNGTGDLFA 221 (254)
T ss_pred HcCCCcCCHHHHHHHHHHH------HHhCCCEEEEEeeccCCCCcEEEEEEecCccEEEEeecc-CC-CCCcCChHHHHH
Confidence 9886443345667788887 667899999999985 788887766555554433 12 699999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHhhhhhhh
Q 019448 300 GGFLSQLVQEKPIEECVRAGCYTSHVIIQR 329 (341)
Q Consensus 300 ag~~~~l~~g~~~~~a~~~a~~~Aa~~v~~ 329 (341)
|||+++|++|+++++|+++|++....+++.
T Consensus 222 a~~~~~l~~g~~~~~a~~~A~~~~~~~i~~ 251 (254)
T cd01173 222 ALLLARLLKGKSLAEALEKALNFVHEVLEA 251 (254)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998877754
|
Mammals are unable to synthesize PLP de novo and require its precursors in the form of vitamin B6 (pyridoxal, pyridoxine, and pyridoxamine) from their diet. Pyridoxal kinase encoding genes are also found in many other species including yeast and bacteria. |
| >PRK12412 pyridoxal kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.5e-18 Score=151.85 Aligned_cols=160 Identities=18% Similarity=0.157 Sum_probs=124.0
Q ss_pred ceEEEEeccccccCHHHHHHHHHHHHhCCCe-EEEeCCch------hHHHHH-HHHHHhhcCCCcEEecCHHHHHHHhhh
Q 019448 158 AKYFYIAGFFLTVSPDSIQLVAEHAAANNKV-FMMNLSAP------FICEFF-KDALEKVLPYMDYIFGNETEARTFSKV 229 (341)
Q Consensus 158 ~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~-v~~d~~~~------~~~~~~-~~~~~~~l~~~dvl~~n~~E~~~l~~~ 229 (341)
.|++.++- ..+.+.+..+.+.+++.+.+ +++||... ...... ....+.+++++|+++||..|++.|++.
T Consensus 73 ~~~ikiG~---l~~~~~v~~i~~~~~~~~~~~vv~DPv~~~~~g~~~~~~~~~~~~~~~ll~~advitpN~~Ea~~L~g~ 149 (268)
T PRK12412 73 VDALKTGM---LGSVEIIEMVAETIEKHNFKNVVVDPVMVCKGADEALHPETNDCLRDVLVPKALVVTPNLFEAYQLSGV 149 (268)
T ss_pred CCEEEECC---CCCHHHHHHHHHHHHhcCCCCEEECcCeeeCCCCcCCChHHHHHHHHhhhccceEEcCCHHHHHHHhCc
Confidence 78888753 34678888898889888875 99999531 111112 222446889999999999999999875
Q ss_pred cCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCce------EEEECCeeEEEeceecCCCcccCCCCCchhhHHHHH
Q 019448 230 QGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPV------VVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 303 (341)
Q Consensus 230 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~------~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~ 303 (341)
...+.++..++++++ .+.|++.||||.|..|+ +++.++..++++.+. .+.+|++||||+|+|+|+
T Consensus 150 ~~~~~~~~~~aa~~l------~~~g~~~ViIt~G~~g~~~~~~~~~~~~~~~~~~~~~~---v~~~~t~GaGD~f~aa~a 220 (268)
T PRK12412 150 KINSLEDMKEAAKKI------HALGAKYVLIKGGSKLGTETAIDVLYDGETFDLLESEK---IDTTNTHGAGCTYSAAIT 220 (268)
T ss_pred CCCCHHHHHHHHHHH------HhcCCCEEEEeccCCCCCCceEEEEEeCCEEEEEEeCc---cCCCCCCchHHHHHHHHH
Confidence 433344677888888 67789999999998763 445555555666544 378899999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHhhhhhhh
Q 019448 304 SQLVQEKPIEECVRAGCYTSHVIIQR 329 (341)
Q Consensus 304 ~~l~~g~~~~~a~~~a~~~Aa~~v~~ 329 (341)
++|++|+++++|+++|..+...++.+
T Consensus 221 a~l~~g~~l~eA~~~A~~~~~~~i~~ 246 (268)
T PRK12412 221 AELAKGKPVKEAVKTAKEFITAAIRY 246 (268)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988875
|
|
| >TIGR00687 pyridox_kin pyridoxal kinase | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-18 Score=155.07 Aligned_cols=163 Identities=12% Similarity=0.169 Sum_probs=117.8
Q ss_pred hccceEEEEecccc-ccCHHHHHHHHHHHHhCC--CeEEEeCC------chhHHHHHHHHH-HhhcCCCcEEecCHHHHH
Q 019448 155 VEKAKYFYIAGFFL-TVSPDSIQLVAEHAAANN--KVFMMNLS------APFICEFFKDAL-EKVLPYMDYIFGNETEAR 224 (341)
Q Consensus 155 l~~~~~v~i~~~~~-~~~~~~~~~~~~~a~~~~--~~v~~d~~------~~~~~~~~~~~~-~~~l~~~dvl~~n~~E~~ 224 (341)
+.+.|++ +.|+.. ....+.+.++++.+++.+ ..+++||. .....+...+.+ +++++++|++++|.+|++
T Consensus 72 ~~~~d~v-~~G~l~~~~~~~~~~~~l~~~~~~~~~~~vv~Dpv~~d~~~~~~~~~~~~~~~~~~ll~~adii~pN~~Ea~ 150 (286)
T TIGR00687 72 LNQCDAV-LSGYLGSAEQVAMVVGIVRQVKQANPQALYVCDPVMGDPEKGCYVAPDLLEVYREKAIPVADIITPNQFELE 150 (286)
T ss_pred cccCCEE-EECCCCCHHHHHHHHHHHHHHHHhCCCCcEEECCeeeeCCCCeeeChhHHHHHHHhccccccEecCCHHHHH
Confidence 4578887 455432 233467888888888775 56888992 111112233444 458899999999999999
Q ss_pred HHhhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEE-eCCCce--------EEEECCeeEEEeceecCCCc-ccCCCCC
Q 019448 225 TFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVIT-QGADPV--------VVAQDGKLKKFPVIVLPKDK-LVDTNGA 294 (341)
Q Consensus 225 ~l~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt-~G~~G~--------~~~~~~~~~~~~~~~~~~~~-~vd~tGA 294 (341)
.+++....+.++..++++.+ .+.|++.+||| .|.+|+ +++++++.++++.+.. . ++|++||
T Consensus 151 ~L~g~~~~~~~~~~~~~~~l------~~~g~~~Viit~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~d~~Ga 221 (286)
T TIGR00687 151 LLTGRKINTVEEALAAADAL------IAMGPDIVLVTHLARAGSQRDRDFEGLVVTQEGRWHISRPLA---VFMRQPVGT 221 (286)
T ss_pred HHhCCCcCCHHHHHHHHHHH------HHhCCCEEEEEeccccCCCCCcceeEEEEcCCceEEEeccCc---CCCCCCCCh
Confidence 99885433334556677777 56788999999 688775 4455565666654433 4 6899999
Q ss_pred chhhHHHHHHHHhcCCCHHHHHHHHHHHhhhhh
Q 019448 295 GDAFVGGFLSQLVQEKPIEECVRAGCYTSHVII 327 (341)
Q Consensus 295 GDaf~ag~~~~l~~g~~~~~a~~~a~~~Aa~~v 327 (341)
||+|+|+|+++|++|+++++|+++|+++...++
T Consensus 222 GD~f~A~~l~~l~~g~~~~~al~~A~~~v~~~l 254 (286)
T TIGR00687 222 GDLIAALLLATLLHGNSLKEALEKTVSAVYHVL 254 (286)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999944444
|
ThiD and related proteins form an outgroup. |
| >TIGR00097 HMP-P_kinase phosphomethylpyrimidine kinase | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.7e-18 Score=149.12 Aligned_cols=160 Identities=18% Similarity=0.206 Sum_probs=124.4
Q ss_pred ceEEEEeccccccCHHHHHHHHHHHHhCCC-eEEEeCCch------hHHHHHHHHH-HhhcCCCcEEecCHHHHHHHhhh
Q 019448 158 AKYFYIAGFFLTVSPDSIQLVAEHAAANNK-VFMMNLSAP------FICEFFKDAL-EKVLPYMDYIFGNETEARTFSKV 229 (341)
Q Consensus 158 ~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~-~v~~d~~~~------~~~~~~~~~~-~~~l~~~dvl~~n~~E~~~l~~~ 229 (341)
.+.+.++- -.+.+.+..+++.+++++. ++++||... .+.....+.+ +.+++++|+++||..|++.|++.
T Consensus 68 ~~aikiG~---l~~~~~~~~i~~~~~~~~~~~vVlDPv~~~~~g~~l~~~~~~~~~~~~ll~~~dvitpN~~Ea~~L~g~ 144 (254)
T TIGR00097 68 VDAAKTGM---LASAEIVEAVARKLREYPVRPLVVDPVMVAKSGAPLLEEEAIEALRKRLLPLATLITPNLPEAEALLGT 144 (254)
T ss_pred CCEEEECC---cCCHHHHHHHHHHHHhcCCCcEEECCccccCCCCcCCCHHHHHHHHHhccccccEecCCHHHHHHHhCC
Confidence 56777642 3367889999999998888 699998521 1222222223 46889999999999999999885
Q ss_pred cCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCC----Cce-EEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHH
Q 019448 230 QGWETDDVEEIALKLSQWPKASEIRKRTAVITQGA----DPV-VVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLS 304 (341)
Q Consensus 230 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~----~G~-~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~ 304 (341)
...+.++..++++.+ .+.|++.|+||.|. +|. +++++++.++++.+.+ +++|++|+||+|.|+|++
T Consensus 145 ~~~~~~~~~~~a~~l------~~~g~~~Vvvt~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~d~~GaGD~f~aalaa 215 (254)
T TIGR00097 145 KIRTEQDMIKAAKKL------RELGPKAVLIKGGHLEGDQAVDVLFDGGEIHILKAPRI---ETKNTHGTGCTLSAAIAA 215 (254)
T ss_pred CCCCHHHHHHHHHHH------HhcCCCEEEEeCCCCCCCceeEEEEECCeEEEEEeccc---CCCCCCChHHHHHHHHHH
Confidence 433334567788888 66789999999987 344 5577776677775544 789999999999999999
Q ss_pred HHhcCCCHHHHHHHHHHHhhhhhhh
Q 019448 305 QLVQEKPIEECVRAGCYTSHVIIQR 329 (341)
Q Consensus 305 ~l~~g~~~~~a~~~a~~~Aa~~v~~ 329 (341)
+|++|+++++|+++|++++...+++
T Consensus 216 ~la~g~~l~eA~~~A~~~~~~~i~~ 240 (254)
T TIGR00097 216 NLAKGLSLKEAVKEAKEFVTGAIRY 240 (254)
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999975
|
This model represents phosphomethylpyrimidine kinase, the ThiD protein of thiamine biosynthesis. The protein is commonly observed within operons containing other thiamine biosynthesis genes. Numerous examples are fusion proteins with other thiamine-biosynthetic domains. Saccaromyces has three recent paralogs, two of which are isofunctional and score above the trusted cutoff. The third shows a longer branch length in a phylogenetic tree and scores below the trusted cutoff, as do putative second copies in a number of species. |
| >PRK05756 pyridoxamine kinase; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=3e-18 Score=152.98 Aligned_cols=165 Identities=17% Similarity=0.180 Sum_probs=121.4
Q ss_pred hccceEEEEecccc-ccCHHHHHHHHHHHHhCC--CeEEEeCCch-----hH-HHHHHHHH-HhhcCCCcEEecCHHHHH
Q 019448 155 VEKAKYFYIAGFFL-TVSPDSIQLVAEHAAANN--KVFMMNLSAP-----FI-CEFFKDAL-EKVLPYMDYIFGNETEAR 224 (341)
Q Consensus 155 l~~~~~v~i~~~~~-~~~~~~~~~~~~~a~~~~--~~v~~d~~~~-----~~-~~~~~~~~-~~~l~~~dvl~~n~~E~~ 224 (341)
+...+++ ++|+.. ....+.+.++++.+++.+ ..+++||--. .| .+...+.+ +.+++++|+++||..|++
T Consensus 72 l~~~~~v-~~G~l~~~~~~~~v~~~i~~~k~~~~~~~~v~DPv~~d~~~~~~~~~~~~~~~~~~ll~~adiitpN~~Ea~ 150 (286)
T PRK05756 72 LGECDAV-LSGYLGSAEQGEAILDAVRRVKAANPQALYFCDPVMGDPEKGCIVAPGVAEFLRDRALPAADIITPNLFELE 150 (286)
T ss_pred cccCCEE-EECCCCCHHHHHHHHHHHHHHHHhCCCceEEECCccccCCCCEEECccHhHHHHHhhcccccEecCCHHHHH
Confidence 3467866 555432 234567888888888766 4577886311 11 11222233 458999999999999999
Q ss_pred HHhhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCC--------ceEEEECCeeEEEeceecCCCcc-cCCCCCc
Q 019448 225 TFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGAD--------PVVVAQDGKLKKFPVIVLPKDKL-VDTNGAG 295 (341)
Q Consensus 225 ~l~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~--------G~~~~~~~~~~~~~~~~~~~~~~-vd~tGAG 295 (341)
.|++....+.++..++++++ .+.|++.||||.|.. |++++++++.++++.+.+ +. +|++|||
T Consensus 151 ~L~g~~~~~~~~~~~~~~~l------~~~g~~~Vvvt~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~v~~~GaG 221 (286)
T PRK05756 151 WLSGRPVETLEDAVAAARAL------IARGPKIVLVTSLARAGYPADRFEMLLVTADGAWHISRPLV---DFMRQPVGVG 221 (286)
T ss_pred HHhCCCcCCHHHHHHHHHHH------HHhCCCEEEEeccccCCCCCCcEEEEEEECCceEEEecCcc---CCCCCCCChH
Confidence 99875433334556677777 567899999999876 477777776666664433 55 6999999
Q ss_pred hhhHHHHHHHHhcCCCHHHHHHHHHHHhhhhhhh
Q 019448 296 DAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQR 329 (341)
Q Consensus 296 Daf~ag~~~~l~~g~~~~~a~~~a~~~Aa~~v~~ 329 (341)
|+|+|+|+++|++|+++++|+++|++....+++.
T Consensus 222 D~f~a~~~a~l~~g~~~~~al~~A~~~~~~~i~~ 255 (286)
T PRK05756 222 DLTSALFLARLLQGGSLEEALEHTTAAVYEVMAR 255 (286)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988875
|
|
| >PRK06427 bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.78 E-value=1e-17 Score=148.13 Aligned_cols=161 Identities=19% Similarity=0.230 Sum_probs=123.3
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhCCC-eEEEeCCc------hhHHHHHHHHH-HhhcCCCcEEecCHHHHHHHhh
Q 019448 157 KAKYFYIAGFFLTVSPDSIQLVAEHAAANNK-VFMMNLSA------PFICEFFKDAL-EKVLPYMDYIFGNETEARTFSK 228 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~-~v~~d~~~------~~~~~~~~~~~-~~~l~~~dvl~~n~~E~~~l~~ 228 (341)
..+.+.++-. .+.+.+..+++.+++.+. ++++||.. ..+.....+.+ +++++++|+++||..|++.|++
T Consensus 73 ~~~ai~iG~l---~~~~~~~~i~~~~~~~~~~~vv~DPv~~~~~~~~~~~~~~~~~~~~~ll~~~dvitpN~~Ea~~L~g 149 (266)
T PRK06427 73 RIDAVKIGML---ASAEIIETVAEALKRYPIPPVVLDPVMIAKSGDPLLADDAVAALRERLLPLATLITPNLPEAEALTG 149 (266)
T ss_pred CCCEEEECCc---CCHHHHHHHHHHHHhCCCCCEEEcCccccCCCCcCCCHHHHHHHHHhhhCcCeEEcCCHHHHHHHhC
Confidence 4677777542 367788888888888775 79999842 12222222334 4689999999999999999987
Q ss_pred hcCCCCCC-HHHHHHHHhcCCccccCCccEEEEEeCC--Cce----EEEECCeeEEEeceecCCCcccCCCCCchhhHHH
Q 019448 229 VQGWETDD-VEEIALKLSQWPKASEIRKRTAVITQGA--DPV----VVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 301 (341)
Q Consensus 229 ~~~~~~~d-~~~~~~~l~~~~~~~~~~~~~vvvt~G~--~G~----~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag 301 (341)
....+.++ .+++++++ .+.|++.||||.|. +|. +++++++.++++.+.+ +.+|++|+||+|+|+
T Consensus 150 ~~~~~~~~~~~~~a~~l------~~~g~~~Vvit~g~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~GaGD~f~a~ 220 (266)
T PRK06427 150 LPIADTEDEMKAAARAL------HALGCKAVLIKGGHLLDGEESVDWLFDGEGEERFSAPRI---PTKNTHGTGCTLSAA 220 (266)
T ss_pred CCCCCcHHHHHHHHHHH------HhcCCCEEEEcCCCCCCCCceeEEEEeCCcEEEEEeeeE---CCCCCCChHHHHHHH
Confidence 54322233 56778887 66788999999998 553 5666666666666544 678999999999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHhhhhhhh
Q 019448 302 FLSQLVQEKPIEECVRAGCYTSHVIIQR 329 (341)
Q Consensus 302 ~~~~l~~g~~~~~a~~~a~~~Aa~~v~~ 329 (341)
|++++++|+++++|+++|+.+++.++++
T Consensus 221 l~~~l~~g~~l~~A~~~A~~~~~~~i~~ 248 (266)
T PRK06427 221 IAAELAKGASLLDAVQTAKDYVTRAIRH 248 (266)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999876
|
|
| >PRK12413 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.4e-18 Score=147.92 Aligned_cols=163 Identities=20% Similarity=0.184 Sum_probs=117.3
Q ss_pred ccceEEEEe-ccccccCHHHHHHHHHHHH-hCCCeEEEeCCch--hH----HHHHHHHHHhhcCCCcEEecCHHHHHHHh
Q 019448 156 EKAKYFYIA-GFFLTVSPDSIQLVAEHAA-ANNKVFMMNLSAP--FI----CEFFKDALEKVLPYMDYIFGNETEARTFS 227 (341)
Q Consensus 156 ~~~~~v~i~-~~~~~~~~~~~~~~~~~a~-~~~~~v~~d~~~~--~~----~~~~~~~~~~~l~~~dvl~~n~~E~~~l~ 227 (341)
...++..+. |+.+ +.+....+++.++ +.+.++++||... .| .+...+.++++++++|+++||++|++.|+
T Consensus 67 ~~~~~~~i~~G~l~--~~~~~~~~~~~~~~~~~~~vv~DPv~~~~~~~~~~~~~~~~~l~~ll~~~dli~pN~~E~~~L~ 144 (253)
T PRK12413 67 KDVPFSAIKIGLLP--NVEIAEQALDFIKGHPGIPVVLDPVLVCKETHDVEVSELRQELIQFFPYVTVITPNLVEAELLS 144 (253)
T ss_pred hCCCCCEEEECCcC--CHHHHHHHHHHHHhCCCCCEEEcCceecCCCCccccHHHHHHHHHHhccCcEECCCHHHHHHHh
Confidence 344444544 3321 3455666666666 4678899997432 11 12234456678999999999999999999
Q ss_pred hhcCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCc-----e-EEEECCeeEEEeceecCCCcccCCCCCchhhHHH
Q 019448 228 KVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADP-----V-VVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 301 (341)
Q Consensus 228 ~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G-----~-~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag 301 (341)
+....+.++.+++++++ .+.|++.||||.|++| . ++++++. .+.+.++. ..+|++||||+|+|+
T Consensus 145 g~~~~~~~~~~~~a~~l------~~~g~~~Vvvt~g~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~GaGDaf~a~ 214 (253)
T PRK12413 145 GKEIKTLEDMKEAAKKL------YDLGAKAVVIKGGNRLSQKKAIDLFYDGKE-FVILESPV---LEKNNIGAGCTFASS 214 (253)
T ss_pred CcCCCCHHHHHHHHHHH------HHcCCCEEEEeCCCCCCCCcceEEEEcCCE-EEEEeecc---cCCCCCChHHHHHHH
Confidence 86543444566778887 5678999999999864 2 3444443 44444443 668999999999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHhhhhhhhc
Q 019448 302 FLSQLVQEKPIEECVRAGCYTSHVIIQRS 330 (341)
Q Consensus 302 ~~~~l~~g~~~~~a~~~a~~~Aa~~v~~~ 330 (341)
|+++|.+|+++++|+++|.++...++++.
T Consensus 215 ~~~~l~~g~~l~ea~~~A~~~~~~~l~~~ 243 (253)
T PRK12413 215 IASQLVKGKSPLEAVKNSKDFVYQAIQQS 243 (253)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988888763
|
|
| >cd01169 HMPP_kinase 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1 | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.8e-17 Score=144.57 Aligned_cols=160 Identities=20% Similarity=0.200 Sum_probs=122.1
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhC-CCeEEEeCCch------hHHHHHHHH-HHhhcCCCcEEecCHHHHHHHhh
Q 019448 157 KAKYFYIAGFFLTVSPDSIQLVAEHAAAN-NKVFMMNLSAP------FICEFFKDA-LEKVLPYMDYIFGNETEARTFSK 228 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~a~~~-~~~v~~d~~~~------~~~~~~~~~-~~~~l~~~dvl~~n~~E~~~l~~ 228 (341)
+.+++.++- -.+++.+..+.+.+++. +.++++||... .+.....+. .+.+++++|+++||..|++.|++
T Consensus 68 ~~~~i~~G~---l~~~~~~~~i~~~~~~~~~~~vv~Dpv~~~~~~~~~~~~~~~~~~~~~ll~~~dvitpN~~Ea~~L~g 144 (242)
T cd01169 68 PVDAIKIGM---LGSAEIIEAVAEALKDYPDIPVVLDPVMVAKSGDSLLDDDAIEALRELLLPLATLITPNLPEAELLTG 144 (242)
T ss_pred CCCEEEECC---CCCHHHHHHHHHHHHhCCCCcEEECCceeCCCCCcccCHHHHHHHHHHhhccCeEEeCCHHHHHHHhC
Confidence 568888742 23578888888888876 78899998532 111222222 34567999999999999999988
Q ss_pred hcCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCc-----eEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHH
Q 019448 229 VQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADP-----VVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 303 (341)
Q Consensus 229 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G-----~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~ 303 (341)
....+.++..++++.+ .+.|++.||||.|.+| .+++++++.++++.++. +++|++|+||+|+|+|+
T Consensus 145 ~~~~~~~~~~~~~~~l------~~~g~~~Vvit~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~GaGD~f~a~l~ 215 (242)
T cd01169 145 LEIATEEDMMKAAKAL------LALGAKAVLIKGGHLPGDEAVDVLYDGGGFFEFESPRI---DTKNTHGTGCTLSSAIA 215 (242)
T ss_pred CCCCCHHHHHHHHHHH------HhcCCCEEEEecCCCCCCceeEEEEECCcEEEEeccee---CCCCCCChHHHHHHHHH
Confidence 5433333455677777 5678899999999875 36667776777776654 68999999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHhhhhhh
Q 019448 304 SQLVQEKPIEECVRAGCYTSHVIIQ 328 (341)
Q Consensus 304 ~~l~~g~~~~~a~~~a~~~Aa~~v~ 328 (341)
++|++|+++++|+++|+.+-...++
T Consensus 216 a~l~~g~~~~~A~~~A~~~~~~~i~ 240 (242)
T cd01169 216 ANLAKGLSLEEAVREAKEYVTQAIR 240 (242)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998877765
|
The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction. |
| >PRK07105 pyridoxamine kinase; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.1e-17 Score=149.22 Aligned_cols=163 Identities=15% Similarity=0.139 Sum_probs=119.0
Q ss_pred cceEEEEeccccccCHHH---HHHHHHHHHhCCCeEEEeCCch----hH---HHHHHHHHHhhcCCCcEEecCHHHHHHH
Q 019448 157 KAKYFYIAGFFLTVSPDS---IQLVAEHAAANNKVFMMNLSAP----FI---CEFFKDALEKVLPYMDYIFGNETEARTF 226 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~---~~~~~~~a~~~~~~v~~d~~~~----~~---~~~~~~~~~~~l~~~dvl~~n~~E~~~l 226 (341)
..|++.++-. .+++. +.++++.+++.+.++++||... .| .+...+.++++++++|+++||..|++.|
T Consensus 75 ~~~aik~G~l---~~~~~~~~v~~~~~~~~~~~~~vv~DPv~~~~~~l~~~~~~~~~~~~~~ll~~advitpN~~Ea~~L 151 (284)
T PRK07105 75 KFDAIYSGYL---GSPRQIQIVSDFIKYFKKKDLLVVVDPVMGDNGKLYQGFDQEMVEEMRKLIQKADVITPNLTEACLL 151 (284)
T ss_pred ccCEEEECcC---CCHHHHHHHHHHHHHhccCCCeEEECCccccCCcCCCCCCHHHHHHHHHHHhhCCEecCCHHHHHHH
Confidence 5788886432 23444 4445555566678899999532 11 2234455778999999999999999999
Q ss_pred hhhcCC----CCCCHHHHHHHHhcCCccccCCccEEEEEe-----CCCceEEEECC--eeEEEeceecCCCcccCCCCCc
Q 019448 227 SKVQGW----ETDDVEEIALKLSQWPKASEIRKRTAVITQ-----GADPVVVAQDG--KLKKFPVIVLPKDKLVDTNGAG 295 (341)
Q Consensus 227 ~~~~~~----~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~-----G~~G~~~~~~~--~~~~~~~~~~~~~~~vd~tGAG 295 (341)
++.... +.++..++++++ .+.|++.||||. |..|+++++++ ..++.+.+. ..+|++|||
T Consensus 152 ~g~~~~~~~~~~~~~~~~a~~l------~~~g~~~Vvvt~~~~~~g~~g~~~~~~~~~~~~~~~~~~----~~~~~~GaG 221 (284)
T PRK07105 152 LDKPYLEKSYSEEEIKQLLRKL------ADLGPKIVIITSVPFEDGKIGVAYYDRATDRFWKVFCKY----IPAHYPGTG 221 (284)
T ss_pred cCCCcCcCCCCHHHHHHHHHHH------HhcCCCEEEEcCeeeCCCeEEEEEEeCCCCeEEEEeecc----cCCCcCChh
Confidence 875321 233455677777 567889999998 67788888643 344444332 347999999
Q ss_pred hhhHHHHHHHHhcCCCHHHHHHHHHHHhhhhhhhccc
Q 019448 296 DAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGC 332 (341)
Q Consensus 296 Daf~ag~~~~l~~g~~~~~a~~~a~~~Aa~~v~~~g~ 332 (341)
|+|+|+|+++|++|+++++|+++|+.++...+++...
T Consensus 222 D~f~aa~~~~l~~g~~l~~av~~A~~~~~~~i~~~~~ 258 (284)
T PRK07105 222 DIFTSVITGSLLQGDSLPIALDRAVQFIEKGIRATLG 258 (284)
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999985433
|
|
| >PRK08176 pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.2e-17 Score=146.76 Aligned_cols=165 Identities=15% Similarity=0.119 Sum_probs=117.3
Q ss_pred hccceEEEEeccccccCHHHHHHHHHHHHh--CCCeEEEeCCc------hhHHHHHHHHHH-hhcCCCcEEecCHHHHHH
Q 019448 155 VEKAKYFYIAGFFLTVSPDSIQLVAEHAAA--NNKVFMMNLSA------PFICEFFKDALE-KVLPYMDYIFGNETEART 225 (341)
Q Consensus 155 l~~~~~v~i~~~~~~~~~~~~~~~~~~a~~--~~~~v~~d~~~------~~~~~~~~~~~~-~~l~~~dvl~~n~~E~~~ 225 (341)
+.+.|+++++-.......+.+.++++..++ .+.++++||.- .+..+...+.++ .+++++|+++||..|++.
T Consensus 86 l~~~d~i~~G~l~s~~~~~~i~~~l~~~~~~~~~~~vv~DPvm~d~~~~~~~~~~~~~~~~~~Ll~~advitPN~~Ea~~ 165 (281)
T PRK08176 86 LRQLRAVTTGYMGSASQIKILAEWLTALRADHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQHLLPLAQGLTPNIFELEI 165 (281)
T ss_pred cccCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCcEEeCCccccCCCCeEECccHHHHHHHHhHhhcCEeCCCHHHHHH
Confidence 347899998643311123445555555443 36789999951 111122233354 588999999999999999
Q ss_pred HhhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCc-------eEEEECCeeEEEeceecCCCcccCCCCCchhh
Q 019448 226 FSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADP-------VVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAF 298 (341)
Q Consensus 226 l~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G-------~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf 298 (341)
|++....+.++..++++++ .+.|++.||||.|..| ++++++++.+..+ .+. ..+|++|+||+|
T Consensus 166 L~g~~~~~~~~~~~~~~~l------~~~g~~~VvIT~g~~g~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~GaGD~f 235 (281)
T PRK08176 166 LTGKPCRTLDSAIAAAKSL------LSDTLKWVVITSAAGNEENQEMQVVVVTADSVNVIS-HPR---VDTDLKGTGDLF 235 (281)
T ss_pred HhCCCCCCHHHHHHHHHHH------HhcCCCEEEEeeccCCCCCCcEEEEEEeCCceEEEe-cCc---cCCCCCChhHHH
Confidence 9885433334556777887 6678999999999988 5667766544333 322 457999999999
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHhhhhhhh
Q 019448 299 VGGFLSQLVQEKPIEECVRAGCYTSHVIIQR 329 (341)
Q Consensus 299 ~ag~~~~l~~g~~~~~a~~~a~~~Aa~~v~~ 329 (341)
+|+|++++++|+++++|+++|+..-..+++.
T Consensus 236 aa~~~a~l~~g~~l~~Av~~A~~~v~~~i~~ 266 (281)
T PRK08176 236 CAELVSGLLKGKALTDAAHRAGLRVLEVMRY 266 (281)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999888877753
|
|
| >PRK08573 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.2e-17 Score=153.77 Aligned_cols=150 Identities=19% Similarity=0.289 Sum_probs=118.0
Q ss_pred CHHHHHHHHHHHHhCCCeEEEeCCc------hhHHHHHHHH-HHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHHH
Q 019448 171 SPDSIQLVAEHAAANNKVFMMNLSA------PFICEFFKDA-LEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALK 243 (341)
Q Consensus 171 ~~~~~~~~~~~a~~~~~~v~~d~~~------~~~~~~~~~~-~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~~ 243 (341)
+.+.+..+++.+++.+.++++||.. +.|.....+. .+++++++|++++|.+|++.|++....+.++.++++++
T Consensus 82 ~~e~~~~i~~~~k~~g~~vv~DPv~~~~sG~~l~~~~~~~~l~~~llp~adli~pN~~Ea~~L~g~~i~~~~d~~~aa~~ 161 (448)
T PRK08573 82 NREIIEAVAKTVSKYGFPLVVDPVMIAKSGAPLLREDAVDALIKRLLPLATVVTPNRPEAEKLTGMKIRSVEDARKAAKY 161 (448)
T ss_pred CHHHHHHHHHHHHHcCCCEEEcCccccCCCCcCCCHHHHHHHHHhhhccCEEEcCCHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 5788999999999999999999842 2232222222 35788999999999999999988544344566677777
Q ss_pred HhcCCccc-cCCccEEEEEeCC----Cce-EEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHH
Q 019448 244 LSQWPKAS-EIRKRTAVITQGA----DPV-VVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVR 317 (341)
Q Consensus 244 l~~~~~~~-~~~~~~vvvt~G~----~G~-~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~ 317 (341)
+ . ..|++.||||.|. +|+ +++.++..++++.+++ +++|++||||+|+|+|+++|++|+++++|++
T Consensus 162 L------~~~~G~~~VvVt~G~~~g~~~~~~~~~~~~~~~~~~~~v---~~~dt~GAGDaFsAa~aa~l~~G~~l~eAl~ 232 (448)
T PRK08573 162 I------VEELGAEAVVVKGGHLEGEEAVDVLYHNGTFREFRAPRV---ESGCTHGTGCSFSAAIAAGLAKGLDPEEAIK 232 (448)
T ss_pred H------HHHcCCCEEEEecccCCCCceeEEEEECCeEEEEEecCc---CCCCCCChHHHHHHHHHHHHHcCCCHHHHHH
Confidence 7 4 3688999999885 344 4556666666765544 7899999999999999999999999999999
Q ss_pred HHHHHhhhhhhh
Q 019448 318 AGCYTSHVIIQR 329 (341)
Q Consensus 318 ~a~~~Aa~~v~~ 329 (341)
+|+.+...++++
T Consensus 233 ~A~~~~~~al~~ 244 (448)
T PRK08573 233 TAKKFITMAIKY 244 (448)
T ss_pred HHHHHHHHHHHH
Confidence 999999999983
|
|
| >PRK12616 pyridoxal kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.4e-16 Score=140.79 Aligned_cols=161 Identities=19% Similarity=0.186 Sum_probs=121.3
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhCCC-eEEEeCCchh------HHHHHHHHHH-hhcCCCcEEecCHHHHHHHhh
Q 019448 157 KAKYFYIAGFFLTVSPDSIQLVAEHAAANNK-VFMMNLSAPF------ICEFFKDALE-KVLPYMDYIFGNETEARTFSK 228 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~-~v~~d~~~~~------~~~~~~~~~~-~~l~~~dvl~~n~~E~~~l~~ 228 (341)
..+.+.++- -.+.+.+..+.+.+++.+. ++++||-... ......+.++ .+++++|+++||..|++.|++
T Consensus 74 ~~~aikiG~---l~s~~~i~~i~~~l~~~~~~~vV~DPV~~~~~g~~~l~~~~~~~l~~~L~~~advitpN~~Ea~~L~g 150 (270)
T PRK12616 74 GVDAMKTGM---LPTVDIIELAADTIKEKQLKNVVIDPVMVCKGANEVLYPEHAEALREQLAPLATVITPNLFEAGQLSG 150 (270)
T ss_pred CCCEEEECC---CCCHHHHHHHHHHHHhcCCCCEEEccceecCCCCcccCHHHHHHHHHHhhccceEecCCHHHHHHHcC
Confidence 357777743 2367788888888888764 5889996421 1112223344 488899999999999999987
Q ss_pred h-cCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCce------EEEECCeeEEEeceecCCCcccCCCCCchhhHHH
Q 019448 229 V-QGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPV------VVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 301 (341)
Q Consensus 229 ~-~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~------~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag 301 (341)
. ...+.++.+++++++ .+.|++.||||.|..|. ++++++..++++.+.+ +..|++||||+|+|+
T Consensus 151 ~~~~~~~~~~~~aa~~l------~~~G~~~VvVt~G~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~t~GaGD~fsaa 221 (270)
T PRK12616 151 MGEIKTVEQMKEAAKKI------HELGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMI---DTPYTHGAGCTFSAA 221 (270)
T ss_pred CCCCCCHHHHHHHHHHH------HHcCCCEEEEeCCCCCcCCceEEEEEECCeEEEEEeeee---CCCCCCcHHHHHHHH
Confidence 4 233344567778887 66789999999998762 5566666566665444 778999999999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHhhhhhhh
Q 019448 302 FLSQLVQEKPIEECVRAGCYTSHVIIQR 329 (341)
Q Consensus 302 ~~~~l~~g~~~~~a~~~a~~~Aa~~v~~ 329 (341)
|+++|++|+++++|+++|..+....++.
T Consensus 222 laa~l~~g~~l~~Av~~A~~~~~~~i~~ 249 (270)
T PRK12616 222 VTAELAKGSEVKEAIYAAKEFITAAIKE 249 (270)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999888875
|
|
| >KOG3009 consensus Predicted carbohydrate kinase, contains PfkB domain [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.66 E-value=9.6e-16 Score=136.81 Aligned_cols=243 Identities=18% Similarity=0.250 Sum_probs=162.5
Q ss_pred EEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEee
Q 019448 7 LLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGC 86 (341)
Q Consensus 7 v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~~ 86 (341)
=+++|...+|+....|++- ..+.........+..||.+.|.|.++++ +|.++.|+++
T Consensus 343 Pv~vGa~i~D~~~k~d~d~--------------------K~dG~sy~~~~~Qa~GGVarN~A~a~~~---lg~d~~liSa 399 (614)
T KOG3009|consen 343 PVSVGATIVDFEAKTDEDV--------------------KDDGGSYNGQVVQAMGGVARNHADALAR---LGCDSVLISA 399 (614)
T ss_pred ceeecceEEEeEEeecccc--------------------cccCCcccchhhhhccchhhhHHHHHHH---hcCCeeEEEE
Confidence 3899999999999998531 2223333455678999999999999997 4699999999
Q ss_pred eecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccceEEEEecc
Q 019448 87 IGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGF 166 (341)
Q Consensus 87 vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~i~~~ 166 (341)
||+|..|++.+. . . .+.+. ..+.+-+++++++++
T Consensus 400 vG~d~n~~~~~~----------------------------------~------~--~~~~e---~~~dl~~a~~I~~Ds- 433 (614)
T KOG3009|consen 400 VGDDNNGHFFRQ----------------------------------N------S--HKIVE---SNEDLLSADFILLDS- 433 (614)
T ss_pred eccCCcchhhhh----------------------------------h------h--hhhhh---hhhhhhcCCEEEEcC-
Confidence 999931111100 0 0 00011 012233899999987
Q ss_pred ccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC-CCcEEecCHHHHHHHhhhcCC--C------CCCH
Q 019448 167 FLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP-YMDYIFGNETEARTFSKVQGW--E------TDDV 237 (341)
Q Consensus 167 ~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~-~~dvl~~n~~E~~~l~~~~~~--~------~~d~ 237 (341)
++++..+..+++ ++.+..+++++|.+.... ...++-++. .++.+.||..|+-.....+.. + .+..
T Consensus 434 --NiS~~~Ma~il~-ak~~k~~V~fEPTd~~k~---~K~fk~l~v~~i~~i~PN~~Ell~a~k~~~v~~nps~~q~~~~~ 507 (614)
T KOG3009|consen 434 --NISVPVMARILE-AKKHKKQVWFEPTDIDKV---KKVFKTLLVGAITAISPNANELLKAAKLCHVSVNPSVIQTADGV 507 (614)
T ss_pred --CCCHHHHHHHHH-hhhccCceEecCCCchhh---hhhhhhcceeeEEeeCCCHHHHHHHhhcCceeeChhhhccchHH
Confidence 789999999998 999999999999764321 111323332 378999999999543322211 1 1111
Q ss_pred HHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCe-----eEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCH
Q 019448 238 EEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGK-----LKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPI 312 (341)
Q Consensus 238 ~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~-----~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~ 312 (341)
.+.++.+.+ +.......+|+|..++|+++.-.++ ....+++. ...++++..||||+|.++|+++++.+.++
T Consensus 508 ~~~~~~~~~---k~~~~~s~~I~tl~~~G~l~~yr~k~g~l~~~s~~p~~-~~~n~vsvsgaGdsf~~g~i~~l~~~~~v 583 (614)
T KOG3009|consen 508 LELIEKEKT---KLLLNTSIFIVTLANKGSLVVYRNKLGQLEFQSLPPPL-QMNNVVSVSGAGDSFNSGVIAGLAHNKTV 583 (614)
T ss_pred HHHHHHHHH---HhhcccceEEEEeccCceEEEecCCCCCcccccCCCcc-cccceeEeccCCcccccceeehhhcCcch
Confidence 222222211 1345567899999999997754332 23333332 25589999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhh
Q 019448 313 EECVRAGCYTSHVIIQ 328 (341)
Q Consensus 313 ~~a~~~a~~~Aa~~v~ 328 (341)
.+++.-+..|+...++
T Consensus 584 ~es~~gg~~~~ralls 599 (614)
T KOG3009|consen 584 VESLQGGQECARALLS 599 (614)
T ss_pred HhhccccHHHHHHHHh
Confidence 9999999666555443
|
|
| >PLN02898 HMP-P kinase/thiamin-monophosphate pyrophosphorylase | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.9e-14 Score=135.86 Aligned_cols=161 Identities=14% Similarity=0.152 Sum_probs=120.5
Q ss_pred ceEEEEeccccccCHHHHHHHHHHHHhCCCe-EEEeCCc------hhHHHHHHHHH-HhhcCCCcEEecCHHHHHHHhhh
Q 019448 158 AKYFYIAGFFLTVSPDSIQLVAEHAAANNKV-FMMNLSA------PFICEFFKDAL-EKVLPYMDYIFGNETEARTFSKV 229 (341)
Q Consensus 158 ~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~-v~~d~~~------~~~~~~~~~~~-~~~l~~~dvl~~n~~E~~~l~~~ 229 (341)
.+++.++- ..+.+.+..+++.+++.+.+ +++||.. ........+.+ .++++++|+++||..|++.|++.
T Consensus 79 ~~aik~G~---l~~~~~i~~i~~~l~~~~~~~vVlDPV~~~~~G~~l~~~~~~~~l~~~Ll~~adiitPN~~Ea~~L~g~ 155 (502)
T PLN02898 79 VDVVKTGM---LPSAEIVKVLCQALKEFPVKALVVDPVMVSTSGDVLAGPSILSALREELLPLATIVTPNVKEASALLGG 155 (502)
T ss_pred CCEEEECC---cCCHHHHHHHHHHHHhCCCCCEEEccccccCCCCccCCHHHHHHHHHhhhccCeEEcCCHHHHHHHhCC
Confidence 56666643 23578888888888888774 9999942 11112223334 36889999999999999999863
Q ss_pred c-CCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCc------eEEEECCeeEEEeceecCCCcccCCCCCchhhHHHH
Q 019448 230 Q-GWETDDVEEIALKLSQWPKASEIRKRTAVITQGADP------VVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGF 302 (341)
Q Consensus 230 ~-~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G------~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~ 302 (341)
. ..+.++..++++++ .+.|++.||||.|..+ .++++++..++++.+.+ +.+|++|+||+|+|+|
T Consensus 156 ~~~~~~~~~~~~a~~l------~~~G~~~VvItgg~~~~~~~~~~~l~~~~~~~~~~~~~i---~~~~t~GaGD~fsaai 226 (502)
T PLN02898 156 DPLETVADMRSAAKEL------HKLGPRYVLVKGGHLPDSLDAVDVLYDGTEFHELRSSRI---KTRNTHGTGCTLASCI 226 (502)
T ss_pred CCCCCHHHHHHHHHHH------HhcCCCEEEEcCCCCCCCCcceEEEEcCCeEEEEeccee---CCCCCCchhhhHHHHH
Confidence 2 22234566777777 6678899999998753 35666666566665544 6789999999999999
Q ss_pred HHHHhcCCCHHHHHHHHHHHhhhhhhhc
Q 019448 303 LSQLVQEKPIEECVRAGCYTSHVIIQRS 330 (341)
Q Consensus 303 ~~~l~~g~~~~~a~~~a~~~Aa~~v~~~ 330 (341)
++++++|+++++|+++|+.+...++.+.
T Consensus 227 aa~l~~G~~l~eAv~~A~~~v~~ai~~~ 254 (502)
T PLN02898 227 AAELAKGSDMLSAVKVAKRYVETALEYS 254 (502)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999763
|
|
| >PTZ00344 pyridoxal kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=7.6e-14 Score=125.06 Aligned_cols=157 Identities=24% Similarity=0.246 Sum_probs=105.4
Q ss_pred EEEEeccccccCHHHHHHHHH---HHHhCC--CeEEEeCCc----hhHH-HHHHHHHHhhcCCCcEEecCHHHHHHHhhh
Q 019448 160 YFYIAGFFLTVSPDSIQLVAE---HAAANN--KVFMMNLSA----PFIC-EFFKDALEKVLPYMDYIFGNETEARTFSKV 229 (341)
Q Consensus 160 ~v~i~~~~~~~~~~~~~~~~~---~a~~~~--~~v~~d~~~----~~~~-~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~ 229 (341)
.++++|+.+ +.+.+..+++ .+++++ +++++||-- ..|. +...+.++++++++|++++|++|++.|++.
T Consensus 79 ~~v~sG~l~--~~~~~~~i~~~l~~~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~ll~~~dii~pN~~E~~~L~g~ 156 (296)
T PTZ00344 79 TYVLTGYIN--SADILREVLATVKEIKELRPKLIFLCDPVMGDDGKLYVKEEVVDAYRELIPYADVITPNQFEASLLSGV 156 (296)
T ss_pred CEEEECCCC--CHHHHHHHHHHHHHHHHhCCCceEEECCccccCCceEeCHHHHHHHHHHhhhCCEEeCCHHHHHHHhCC
Confidence 445555443 4555554444 445555 478889532 1122 335566778899999999999999999885
Q ss_pred cCCCCCCHHHHHHHHhcCCccccCCccEEEEE---eCCCc----eEEEE--C----CeeEEEeceecCCCcccCCCCCch
Q 019448 230 QGWETDDVEEIALKLSQWPKASEIRKRTAVIT---QGADP----VVVAQ--D----GKLKKFPVIVLPKDKLVDTNGAGD 296 (341)
Q Consensus 230 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt---~G~~G----~~~~~--~----~~~~~~~~~~~~~~~~vd~tGAGD 296 (341)
...+.++..++++++ .+.|++.|||| .|.+| +++.+ . ++.+.+..+. .+ ++++|+||
T Consensus 157 ~~~~~~~~~~~~~~l------~~~g~~~VvVTg~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~---~~-~~~~GaGD 226 (296)
T PTZ00344 157 EVKDLSDALEAIDWF------HEQGIPVVVITSFREDEDPTHLRFLLSCRDKDTKNNKRFTGKVPY---IE-GRYTGTGD 226 (296)
T ss_pred CCCCHHHHHHHHHHH------HHhCCCEEEEEeecCCCCCCcEEEEEEeccccCCCceeEEEeccc---cC-CCCCCchH
Confidence 322233455677777 56688999999 55556 44432 1 2234444322 23 57799999
Q ss_pred hhHHHHHHHHhcCCCHHHHHHHHHHHhhhhhhh
Q 019448 297 AFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQR 329 (341)
Q Consensus 297 af~ag~~~~l~~g~~~~~a~~~a~~~Aa~~v~~ 329 (341)
+|+|+|++.+.+| ++++|+++|.+.-..+++.
T Consensus 227 ~f~A~~~a~l~~g-~~~~a~~~A~a~~~~~i~~ 258 (296)
T PTZ00344 227 LFAALLLAFSHQH-PMDLAVGKAMGVLQDIIKA 258 (296)
T ss_pred HHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHH
Confidence 9999999888888 9999999999888777754
|
|
| >PTZ00347 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=9.9e-14 Score=133.16 Aligned_cols=163 Identities=15% Similarity=0.203 Sum_probs=115.4
Q ss_pred hhccceEEEE-eccccccCHHHHHHHHHHHHhCCCeEEEeCCch------hHHHH----HHHHHH-hhcCCCcEEecCHH
Q 019448 154 LVEKAKYFYI-AGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAP------FICEF----FKDALE-KVLPYMDYIFGNET 221 (341)
Q Consensus 154 ~l~~~~~v~i-~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~------~~~~~----~~~~~~-~~l~~~dvl~~n~~ 221 (341)
.+++.++..+ .|+ ..+.+.+..+++.++ +.++++||-.. .+... ..+.++ ++++.+|+++||..
T Consensus 294 l~~d~~~~~Ik~G~--l~s~e~i~~i~~~l~--~~~vV~DPV~~~~~G~~l~~~~~~~~~~~~~~~~Ll~~advitPN~~ 369 (504)
T PTZ00347 294 VMSDFNISVVKLGL--VPTARQLEIVIEKLK--NLPMVVDPVLVATSGDDLVAQKNADDVLAMYKERIFPMATIITPNIP 369 (504)
T ss_pred HHhCCCCCEEEECC--cCCHHHHHHHHHHhc--CCCEEEcccceeCCCCcccchhHHHHHHHHHHHhccCcceEEeCCHH
Confidence 3444444443 332 235777787777775 56788997431 11111 122233 68899999999999
Q ss_pred HHHHHhhhc-CCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCc-------eEEEEC--CeeEEEeceecCCCcccCC
Q 019448 222 EARTFSKVQ-GWETDDVEEIALKLSQWPKASEIRKRTAVITQGADP-------VVVAQD--GKLKKFPVIVLPKDKLVDT 291 (341)
Q Consensus 222 E~~~l~~~~-~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G-------~~~~~~--~~~~~~~~~~~~~~~~vd~ 291 (341)
|++.|++.. ..+.++..++++.+ .+.|++.||||.|.+| ..++.+ +..++++.+.+ +++|+
T Consensus 370 Ea~~L~g~~~~~~~~~~~~aa~~l------~~~G~~~VvVtgg~~~~~~~~~~~~l~~~~~~~~~~~~~~~i---~~~~~ 440 (504)
T PTZ00347 370 EAERILGRKEITGVYEARAAAQAL------AQYGSRYVLVKGGHDLIDPEACRDVLYDREKDRFYEFTANRI---ATINT 440 (504)
T ss_pred HHHHHhCCCCCCCHHHHHHHHHHH------HhcCCCEEEEeCCCCCcCCCcceEEEEcCCCCeEEEEEeeeE---CCCCC
Confidence 999998852 22233556777777 5678999999999863 344543 34566776544 77899
Q ss_pred CCCchhhHHHHHHHHhcCCCHHHHHHHHHHHhhhhhhh
Q 019448 292 NGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQR 329 (341)
Q Consensus 292 tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~Aa~~v~~ 329 (341)
+|+||+|+|+++++|++|+++++|+++|..+-...+..
T Consensus 441 ~GaGD~fsaaiaa~la~G~~l~eAv~~A~~~v~~~i~~ 478 (504)
T PTZ00347 441 HGTGCTLASAISSFLARGYTVPDAVERAIGYVHEAIVR 478 (504)
T ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999998887777754
|
|
| >PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2 | Back alignment and domain information |
|---|
Probab=99.55 E-value=1e-13 Score=120.89 Aligned_cols=160 Identities=21% Similarity=0.223 Sum_probs=115.8
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCch------hHHHHHHHHHHh-hcCCCcEEecCHHHHHHHhhh
Q 019448 157 KAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAP------FICEFFKDALEK-VLPYMDYIFGNETEARTFSKV 229 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~------~~~~~~~~~~~~-~l~~~dvl~~n~~E~~~l~~~ 229 (341)
..+.+.++- -.+.+.+..+.+..+..+.++++||--. ...+...+.+++ +++++|++.||..|++.|++.
T Consensus 60 ~~~aikiG~---l~~~~~v~~i~~~l~~~~~~vV~DPVm~~~~g~~~~~~~~~~~~~~~Llp~AdiitPN~~Ea~~L~g~ 136 (246)
T PF08543_consen 60 KFDAIKIGY---LGSAEQVEIIADFLKKPKIPVVLDPVMGDSGGYYYVDPDVVEAMREELLPLADIITPNLTEAELLTGR 136 (246)
T ss_dssp C-SEEEE-S----SSHHHHHHHHHHHHHTTTEEEEE---EETTTECTSSHHHHHHHHHHCGGG-SEEE-BHHHHHHHHTS
T ss_pred cccEEEEcc---cCCchhhhhHHHHHhccCCCEEEecccccCCCCcCCCHHHHHHHHhccCCcCeEEeCCHHHHHHHhCC
Confidence 578888753 2366777777777777778999999321 122334455555 999999999999999999996
Q ss_pred cCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCC----c---eEEEECCeeEEEeceecCCCcccCCCCCchhhHHHH
Q 019448 230 QGWETDDVEEIALKLSQWPKASEIRKRTAVITQGAD----P---VVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGF 302 (341)
Q Consensus 230 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~----G---~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~ 302 (341)
...+.++..++++++ .+.|++.||||-+.. + ..++++++.+.+..+.+ ...+..|.||+|.|++
T Consensus 137 ~i~~~~~~~~~~~~l------~~~G~~~VvItg~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~GTGd~fss~l 207 (246)
T PF08543_consen 137 EINSEEDIEEAAKAL------LALGPKNVVITGGHLDGDEGIITDVLYDGGEFYWLSSPRI---PTGSFHGTGDLFSSAL 207 (246)
T ss_dssp --SSHHHHHHHHHHH------HHTS-SEEEEEEEEGGSSCEEEEEEEETTSEEEEEEEEEE---CTSGCTTHHHHHHHHH
T ss_pred CCCChHhHHHHHHHH------HHhCCceEEEeeeccccccccccceeeeccceeecceeEE---cCCCCCCchhHHHHHH
Confidence 555566778888888 678999999998762 2 34455666666665544 3468899999999999
Q ss_pred HHHHhcCCCHHHHHHHHHHHhhhhhh
Q 019448 303 LSQLVQEKPIEECVRAGCYTSHVIIQ 328 (341)
Q Consensus 303 ~~~l~~g~~~~~a~~~a~~~Aa~~v~ 328 (341)
++.|++|+++++|++.|...-...++
T Consensus 208 aa~l~~g~~l~~Av~~A~~~v~~~i~ 233 (246)
T PF08543_consen 208 AAFLAKGYSLEEAVEKAKNFVRRAIK 233 (246)
T ss_dssp HHHHHTTSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988887776
|
7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D .... |
| >cd01171 YXKO-related B | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.1e-13 Score=121.63 Aligned_cols=161 Identities=17% Similarity=0.067 Sum_probs=114.4
Q ss_pred hhccceEEEEeccccccCH-HHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCC
Q 019448 154 LVEKAKYFYIAGFFLTVSP-DSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGW 232 (341)
Q Consensus 154 ~l~~~~~v~i~~~~~~~~~-~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~ 232 (341)
.+.+.|++++++. ++. +.+..+++.+++++.++++|+..........+ . .+.+..+++.||..|++.|++....
T Consensus 74 ~~~~~d~v~ig~g---l~~~~~~~~i~~~~~~~~~pvVlDa~~~~~~~~~~~-~-~~~~~~~iltPn~~E~~~L~g~~~~ 148 (254)
T cd01171 74 LLERADAVVIGPG---LGRDEEAAEILEKALAKDKPLVLDADALNLLADEPS-L-IKRYGPVVLTPHPGEFARLLGALVE 148 (254)
T ss_pred hhccCCEEEEecC---CCCCHHHHHHHHHHHhcCCCEEEEcHHHHHhhcChh-h-hccCCCEEECCCHHHHHHHhCCChh
Confidence 4567899999752 332 77888888888889999999975432111100 0 2456789999999999999875322
Q ss_pred C-CCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCC
Q 019448 233 E-TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKP 311 (341)
Q Consensus 233 ~-~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~ 311 (341)
+ .++..++++++ .+.+ +.+|++.|. +.+++++++.++++... ...++++|+||+|+|.+.+.+.+|++
T Consensus 149 ~~~~~~~~~a~~l------~~~~-~~~vvlkG~-~~~i~~~~~~~~~~~~~---~~~~~~~GaGD~lag~iaa~la~g~~ 217 (254)
T cd01171 149 EIQADRLAAAREA------AAKL-GATVVLKGA-VTVIADPDGRVYVNPTG---NPGLATGGSGDVLAGIIAALLAQGLS 217 (254)
T ss_pred hhhhHHHHHHHHH------HHHc-CcEEEEcCC-CCEEECCCCcEEEECCC---CcccccCchHHHHHHHHHHHHHcCCC
Confidence 2 22345667777 3444 346666674 56666654445555443 37889999999998888888889999
Q ss_pred HHHHHHHHHHHhhhhhhhc
Q 019448 312 IEECVRAGCYTSHVIIQRS 330 (341)
Q Consensus 312 ~~~a~~~a~~~Aa~~v~~~ 330 (341)
+++|+++|+.+.+.+.+..
T Consensus 218 ~~eA~~~A~~~~~~a~~~~ 236 (254)
T cd01171 218 PLEAAALAVYLHGLAGDLA 236 (254)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888754
|
subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily. |
| >COG0351 ThiD Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.2e-13 Score=114.12 Aligned_cols=149 Identities=22% Similarity=0.278 Sum_probs=119.7
Q ss_pred CHHHHHHHHHHHHhCC-CeEEEeCC------chhHHHHHHHHHH-hhcCCCcEEecCHHHHHHHhhh-cCCCCCCHHHHH
Q 019448 171 SPDSIQLVAEHAAANN-KVFMMNLS------APFICEFFKDALE-KVLPYMDYIFGNETEARTFSKV-QGWETDDVEEIA 241 (341)
Q Consensus 171 ~~~~~~~~~~~a~~~~-~~v~~d~~------~~~~~~~~~~~~~-~~l~~~dvl~~n~~E~~~l~~~-~~~~~~d~~~~~ 241 (341)
+++.+..+.+..++++ .++++||- .+...+...+.++ +++|+++++.||..|++.|++. ...+.+|.++++
T Consensus 83 ~~eiie~va~~l~~~~~~~vV~DPVmvaksG~~Ll~~~a~~~l~~~LlP~a~vvTPNl~EA~~L~g~~~i~~~~d~~~a~ 162 (263)
T COG0351 83 SAEIIEVVAEKLKKYGIGPVVLDPVMVAKSGDPLLDEEAVEALREELLPLATVVTPNLPEAEALSGLPKIKTEEDMKEAA 162 (263)
T ss_pred CHHHHHHHHHHHHhcCCCcEEECceEEEcCCCcccChHHHHHHHHHhhccCeEecCCHHHHHHHcCCCccCCHHHHHHHH
Confidence 6888999999999988 67999992 2233344445454 8999999999999999999994 556667788887
Q ss_pred HHHhcCCccccCCccEEEEEeCCCc----eEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHH
Q 019448 242 LKLSQWPKASEIRKRTAVITQGADP----VVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVR 317 (341)
Q Consensus 242 ~~l~~~~~~~~~~~~~vvvt~G~~G----~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~ 317 (341)
+.+ .+.|++.||||-|... -++|.++.++.+..+.+ +-.++.|+|++|.|++.+.|.+|.++++|++
T Consensus 163 ~~i------~~~g~~~VliKGGH~~~~~~D~l~~~~~~~~f~~~ri---~t~~tHGTGCTlSaAIaa~LA~G~~l~~AV~ 233 (263)
T COG0351 163 KLL------HELGAKAVLIKGGHLEGEAVDVLYDGGSFYTFEAPRI---PTKNTHGTGCTLSAAIAANLAKGLSLEEAVK 233 (263)
T ss_pred HHH------HHhCCCEEEEcCCCCCCCceeEEEcCCceEEEecccc---CCCCCCCccHHHHHHHHHHHHcCCCHHHHHH
Confidence 777 6789999999977633 35566666666665444 6678999999999999999999999999999
Q ss_pred HHHHHhhhhhh
Q 019448 318 AGCYTSHVIIQ 328 (341)
Q Consensus 318 ~a~~~Aa~~v~ 328 (341)
.|-..-..+++
T Consensus 234 ~Ak~fv~~AI~ 244 (263)
T COG0351 234 KAKEFVTRAIR 244 (263)
T ss_pred HHHHHHHHHHh
Confidence 99998888887
|
|
| >PRK09517 multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.1e-13 Score=134.16 Aligned_cols=160 Identities=14% Similarity=0.180 Sum_probs=116.9
Q ss_pred ceEEEEeccccccCHHHHHHHHHHHHhC-CCeEEEeCCch------hHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhc
Q 019448 158 AKYFYIAGFFLTVSPDSIQLVAEHAAAN-NKVFMMNLSAP------FICEFFKDALEKVLPYMDYIFGNETEARTFSKVQ 230 (341)
Q Consensus 158 ~~~v~i~~~~~~~~~~~~~~~~~~a~~~-~~~v~~d~~~~------~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~ 230 (341)
.+.+-++- -.+.+.+..+.+.+++. +.++++||... .+.....+.++++++++|+++||..|++.|++..
T Consensus 311 ~~aiKiGm---L~s~e~v~~i~~~l~~~~~~~vVlDPV~~~~sG~~l~~~~~~~~l~~Llp~adlItPN~~Ea~~L~g~~ 387 (755)
T PRK09517 311 VDAVKLGM---LGSADTVDLVASWLGSHEHGPVVLDPVMVATSGDRLLDADATEALRRLAVHVDVVTPNIPELAVLCGEA 387 (755)
T ss_pred CCEEEECC---CCCHHHHHHHHHHHHhCCCCCEEEecccccCCCCCCCCHHHHHHHHHHhCcccCccCCHHHHHHHhCCC
Confidence 46666642 23577888888888875 46799998421 1222233446679999999999999999998742
Q ss_pred -CCCCCCHHHHHHHHhcCCccccCCccEEEEEeC------CCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHH
Q 019448 231 -GWETDDVEEIALKLSQWPKASEIRKRTAVITQG------ADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 303 (341)
Q Consensus 231 -~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G------~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~ 303 (341)
..+.++..++++++ .+.+...||||.| ..+++++.++..++++.+.+ +.+|++|+||+|.|+++
T Consensus 388 ~~~~~~d~~~aa~~L------~~~~g~~VVVkgGh~~~~~~~~~l~~~~~~~~~~~~~~v---~~~~t~GaGDtfsaaia 458 (755)
T PRK09517 388 PAITMDEAIAQARGF------ARTHGTIVIVKGGHLTGDLADNAVVRPDGSVHQVENPRV---NTTNSHGTGCSLSAALA 458 (755)
T ss_pred CCCCHHHHHHHHHHH------HHhcCCEEEEcCCcCCCCccceEEEeCCCeEEEEeeccc---CCCCCcChHHHHHHHHH
Confidence 12234455667776 3332347999988 34666665555666665544 78999999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHhhhhhhh
Q 019448 304 SQLVQEKPIEECVRAGCYTSHVIIQR 329 (341)
Q Consensus 304 ~~l~~g~~~~~a~~~a~~~Aa~~v~~ 329 (341)
++|++|+++++|++.|..+-...+.+
T Consensus 459 a~La~G~sl~eAv~~A~~~v~~~i~~ 484 (755)
T PRK09517 459 TLIAAGESVEKALEWATRWLNEALRH 484 (755)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998888865
|
|
| >cd01170 THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.4e-12 Score=113.09 Aligned_cols=167 Identities=15% Similarity=0.083 Sum_probs=114.8
Q ss_pred hhhhhccceEEEEecccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC--CCcEEecCHHHHHHHh
Q 019448 151 NWALVEKAKYFYIAGFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP--YMDYIFGNETEARTFS 227 (341)
Q Consensus 151 ~~~~l~~~~~v~i~~~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~E~~~l~ 227 (341)
..+.+++.|++++..-.+ +...+.+..+++.+++.+.++++||....+.....+...+++. ++|++.||..|+..|+
T Consensus 43 ~~~~l~~~d~vvi~~G~l~~~~~~~i~~~~~~~~~~~~pvVlDp~~~~~~~~~~~~~~~ll~~~~~~ilTPN~~Ea~~L~ 122 (242)
T cd01170 43 VEELAKIAGALVINIGTLTSEQIEAMLKAGKAANQLGKPVVLDPVGVGATSFRTEVAKELLAEGQPTVIRGNASEIAALA 122 (242)
T ss_pred HHHHHHHcCcEEEeCCCCChHHHHHHHHHHHHHHhcCCCEEEcccccCcchhHHHHHHHHHhcCCCeEEcCCHHHHHHHh
Confidence 346678899999953221 1123556666667888899999999643221111123445555 4999999999999999
Q ss_pred hhcCCC---------CCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhh
Q 019448 228 KVQGWE---------TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAF 298 (341)
Q Consensus 228 ~~~~~~---------~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf 298 (341)
+....+ .++..++++++. +.+...|++| |.... ++++++.++++..+. ...++.|+||++
T Consensus 123 g~~~~~~~~~~~~~~~~~~~~aa~~l~------~~~~~~Vllk-G~~d~-l~~~~~~~~~~~~~~---~~~~v~GtGdtL 191 (242)
T cd01170 123 GLTGLGKGVDSSSSDEEDALELAKALA------RKYGAVVVVT-GEVDY-ITDGERVVVVKNGHP---LLTKITGTGCLL 191 (242)
T ss_pred CCCCCcCcccCCCcchHHHHHHHHHHH------HHhCCEEEEE-CCCcE-EEECCEEEEEeCCCc---cccCCCchHHHH
Confidence 854221 235667777773 3334568888 66664 556777777764322 445668999999
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHhhhhhh
Q 019448 299 VGGFLSQLVQEKPIEECVRAGCYTSHVIIQ 328 (341)
Q Consensus 299 ~ag~~~~l~~g~~~~~a~~~a~~~Aa~~v~ 328 (341)
.|++.+.|.+|.++.+|+..|...-+.++.
T Consensus 192 a~aiAa~LA~g~~~~~A~~~A~~~~~~a~~ 221 (242)
T cd01170 192 GAVIAAFLAVGDDPLEAAVSAVLVYGIAGE 221 (242)
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999776666654
|
A reaction that allows cells to recycle Thz into the thiamine biosynthesis pathway, as an alternative to its synthesis from cysteine, tyrosine and 1-deoxy-D-xylulose-5-phosphate. |
| >PRK14713 multifunctional hydroxymethylpyrimidine phosphokinase/4-amino-5-aminomethyl-2-methylpyrimidine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.1e-12 Score=126.37 Aligned_cols=158 Identities=17% Similarity=0.150 Sum_probs=108.7
Q ss_pred ceEEEEeccccccCHHHHHHHHHHHHhCC-CeEEEeCCc------hhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhc
Q 019448 158 AKYFYIAGFFLTVSPDSIQLVAEHAAANN-KVFMMNLSA------PFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQ 230 (341)
Q Consensus 158 ~~~v~i~~~~~~~~~~~~~~~~~~a~~~~-~~v~~d~~~------~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~ 230 (341)
.+.+.++-. .+.+.+..+.+..++.. .++++||.- ..+.+...+.++++++++|+++||..|++.|++..
T Consensus 99 ~~aikiG~l---~s~~~i~~v~~~l~~~~~~~vVlDPv~~~~~G~~l~~~~~~~~~~~Ll~~advItPN~~Ea~~Ltg~~ 175 (530)
T PRK14713 99 VDAVKIGML---GDAEVIDAVRTWLAEHRPPVVVLDPVMVATSGDRLLEEDAEAALRELVPRADLITPNLPELAVLLGEP 175 (530)
T ss_pred CCEEEECCc---CCHHHHHHHHHHHHhCCCCCEEECCcccCCCCCCCCCHHHHHHHHHHhhhhheecCChHHHHHHhCCC
Confidence 566776422 24555555555555443 358889842 22233455667789999999999999999998743
Q ss_pred C-CCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCc-----eEEE-ECCeeEEEeceecCCCcccCCCCCchhhHHHHH
Q 019448 231 G-WETDDVEEIALKLSQWPKASEIRKRTAVITQGADP-----VVVA-QDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 303 (341)
Q Consensus 231 ~-~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G-----~~~~-~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~ 303 (341)
. .+.++..++++++ .+.+...||||.|..+ ..++ .+++.++++.+.+ +.+|++|+||+|.|+|+
T Consensus 176 ~~~~~~d~~~aa~~L------~~~~g~~VvItgG~~~~~~~~d~~~~~~~~~~~~~~~~v---~~~~t~GaGD~fsaala 246 (530)
T PRK14713 176 PATTWEEALAQARRL------AAETGTTVLVKGGHLDGQRAPDALVGPDGAVTEVPGPRV---DTRNTHGTGCSLSSALA 246 (530)
T ss_pred CCCCHHHHHHHHHHH------HHhcCCEEEEeCCCCCCCcceEEEEcCCCeEEEEeeeee---CCCCCCcHHHHHHHHHH
Confidence 2 1234455666776 3333468999988632 3344 3444666665544 77899999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHhhhhh
Q 019448 304 SQLVQEKPIEECVRAGCYTSHVII 327 (341)
Q Consensus 304 ~~l~~g~~~~~a~~~a~~~Aa~~v 327 (341)
++|++|+++++|+++|+..-...+
T Consensus 247 a~La~G~~l~eAv~~A~~~v~~~i 270 (530)
T PRK14713 247 TRLGRGGDWAAALRWATAWLHGAI 270 (530)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999998444444
|
|
| >PLN02978 pyridoxal kinase | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.6e-12 Score=116.84 Aligned_cols=162 Identities=13% Similarity=0.102 Sum_probs=108.1
Q ss_pred ceEEEEeccccccCHHHHHHHHHHHHh--CCCeEEEeCCch----hH-HHHHHHHHH-hhcCCCcEEecCHHHHHHHhhh
Q 019448 158 AKYFYIAGFFLTVSPDSIQLVAEHAAA--NNKVFMMNLSAP----FI-CEFFKDALE-KVLPYMDYIFGNETEARTFSKV 229 (341)
Q Consensus 158 ~~~v~i~~~~~~~~~~~~~~~~~~a~~--~~~~v~~d~~~~----~~-~~~~~~~~~-~~l~~~dvl~~n~~E~~~l~~~ 229 (341)
.+.+.++-.......+.+.++++.+++ .++++++||... .+ .+...+.++ .+++++|+++||..|++.|++.
T Consensus 87 ~~ai~~G~l~s~~~~~~v~~~l~~~~~~~~~~~vvlDPvm~d~G~l~~~~~~~~~~~~~ll~~adiitPN~~Ea~~L~g~ 166 (308)
T PLN02978 87 YTHLLTGYIGSVSFLRTVLRVVKKLRSVNPNLTYVCDPVLGDEGKLYVPPELVPVYREKVVPLATMLTPNQFEAEQLTGI 166 (308)
T ss_pred cCEEEecccCCHHHHHHHHHHHHHHHHhCCCCeEEECCcccCCCCccCChhHHHHHHHHHHhhCCeeccCHHHHHHHhCC
Confidence 566665432222234667777777776 346788898521 11 122334454 5999999999999999999875
Q ss_pred cCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCC-CceEEEEC---------CeeEEEeceecCCCcccCCCCCchhhH
Q 019448 230 QGWETDDVEEIALKLSQWPKASEIRKRTAVITQGA-DPVVVAQD---------GKLKKFPVIVLPKDKLVDTNGAGDAFV 299 (341)
Q Consensus 230 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~-~G~~~~~~---------~~~~~~~~~~~~~~~~vd~tGAGDaf~ 299 (341)
...+.++..++++++ .+.|++.||||.+. +|..+... ++.+++..+.+ +.. ++|+||+|+
T Consensus 167 ~~~~~~~~~~a~~~l------~~~g~~~VVITs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~~-~~GtGD~fs 236 (308)
T PLN02978 167 RIVTEEDAREACAIL------HAAGPSKVVITSIDIDGKLLLVGSHRKEKGARPEQFKIVIPKI---PAY-FTGTGDLMA 236 (308)
T ss_pred CCCCHHHHHHHHHHH------HHhCCCEEEEEEecCCCCEEEEEecccccCCCCceEEEEccCC---CCC-CCCchHHHH
Confidence 322233455777777 56788999998744 34332211 24455554433 333 589999999
Q ss_pred HHHHHHHhcC-CCHHHHHHHHHHHhhhhhhh
Q 019448 300 GGFLSQLVQE-KPIEECVRAGCYTSHVIIQR 329 (341)
Q Consensus 300 ag~~~~l~~g-~~~~~a~~~a~~~Aa~~v~~ 329 (341)
|++++.+.+| .++++|++.|...-...++.
T Consensus 237 A~laa~l~~g~~~l~~A~~~A~~~v~~~i~~ 267 (308)
T PLN02978 237 ALLLGWSHKYPDNLDKAAELAVSSLQAVLRR 267 (308)
T ss_pred HHHHHHHhcCCcCHHHHHHHHHHHHHHHHHH
Confidence 9888888887 79999999999887777664
|
|
| >TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related | Back alignment and domain information |
|---|
Probab=99.40 E-value=2e-11 Score=108.19 Aligned_cols=161 Identities=16% Similarity=0.096 Sum_probs=110.9
Q ss_pred hhhccceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCC
Q 019448 153 ALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGW 232 (341)
Q Consensus 153 ~~l~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~ 232 (341)
..+...|++++++.. .+.+.+..+++.+++.+.++++|+....+... ......+.++++||..|++.|++....
T Consensus 88 ~~~~~~davvig~Gl--~~~~~~~~l~~~~~~~~~pvVlDa~g~~l~~~----~~~~~~~~~vItPN~~El~~L~g~~~~ 161 (272)
T TIGR00196 88 ELLERYDVVVIGPGL--GQDPSFKKAVEEVLELDKPVVLDADALNLLTY----DKPKREGEVILTPHPGEFKRLLGLVNE 161 (272)
T ss_pred hhhccCCEEEEcCCC--CCCHHHHHHHHHHHhcCCCEEEEhHHHHHHhh----cccccCCCEEECCCHHHHHHHhCCchh
Confidence 345788999997632 12334778888888889999999975432111 101134689999999999999985433
Q ss_pred CCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCH
Q 019448 233 ETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPI 312 (341)
Q Consensus 233 ~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~ 312 (341)
+.++..++++++. +. .+.+|++.|..+.++..++..+..+ .. ....+++|+||++.|.+.+.+.+|.++
T Consensus 162 ~~~~~~~aa~~l~------~~-~~~vVv~kG~~~~i~~~~~~~~~~~-~~---~~~~~~~GaGD~lag~iaa~la~g~~~ 230 (272)
T TIGR00196 162 IQGDRLEAAQDIA------QK-LQAVVVLKGAADVIAAPDGDLWINK-TG---NAALAKGGTGDVLAGLIGGLLAQNLDP 230 (272)
T ss_pred hhhhHHHHHHHHH------HH-hCCEEEEcCCCCEEEcCCCeEEEEC-CC---CCccCCCCchHHHHHHHHHHHhCCCCH
Confidence 4456677777773 32 3458888899998665444555433 22 366789999999666565666689999
Q ss_pred HHHHHHH---HHHhhhhhhhc
Q 019448 313 EECVRAG---CYTSHVIIQRS 330 (341)
Q Consensus 313 ~~a~~~a---~~~Aa~~v~~~ 330 (341)
.+|+..| ...|+..+.+.
T Consensus 231 ~~A~~~a~~~~~~a~~~~~~~ 251 (272)
T TIGR00196 231 FDAACNAAFAHGLAGDLALKN 251 (272)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 9999777 77777666443
|
The present model may hit hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis. |
| >COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.9e-11 Score=104.04 Aligned_cols=165 Identities=14% Similarity=0.114 Sum_probs=117.5
Q ss_pred hhhccceEEEEeccccccCHHHHHHHHHHHHhCCCe--EEEeCCc-----hhHHHHHHHHHH-hhcCCCcEEecCHHHHH
Q 019448 153 ALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKV--FMMNLSA-----PFICEFFKDALE-KVLPYMDYIFGNETEAR 224 (341)
Q Consensus 153 ~~l~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~--v~~d~~~-----~~~~~~~~~~~~-~~l~~~dvl~~n~~E~~ 224 (341)
+.+.++|.++.+-.........+..+++..|+.+.. +.+||-- -+......+..+ ++++.+|++.||.-|++
T Consensus 69 ~~~~~~davltGYlgs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD~gglYV~~~~~~~~~~~lip~AdiiTPN~fELe 148 (281)
T COG2240 69 DKLGECDAVLTGYLGSAEQVRAIAGIVKAVKEANPNALYLCDPVMGDPGGLYVAPEVAEAYRDELLPLADIITPNIFELE 148 (281)
T ss_pred ccccccCEEEEccCCCHHHHHHHHHHHHHHhccCCCeEEEeCCcccCCCceeeccchHHHHHHhhcchhhEeCCCHHHHH
Confidence 356788988854322222345677777777777554 7777721 111122233333 79999999999999999
Q ss_pred HHhhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCC-----CceEEEECCe---eEEEeceecCCCcccCCCCCch
Q 019448 225 TFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGA-----DPVVVAQDGK---LKKFPVIVLPKDKLVDTNGAGD 296 (341)
Q Consensus 225 ~l~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~-----~G~~~~~~~~---~~~~~~~~~~~~~~vd~tGAGD 296 (341)
.|++....+.+|..++++.| .+.|++.+|||.=. .|..++.... .+++. +. -..+.+|.||
T Consensus 149 ~Ltg~~~~~~~da~~aa~~L------~~~gp~~vlVTS~~~~~~~~~~~~~~~~~~~~~~h~~-~~----v~~~~~GtGD 217 (281)
T COG2240 149 ILTGKPLNTLDDAVKAARKL------GADGPKIVLVTSLSRAGMSTGNFEMLGKSAELAWHIS-PL----VPFIPNGTGD 217 (281)
T ss_pred HHhCCCCCCHHHHHHHHHHH------hhcCCCEEEEecccccCCCCceEEEeccchhhhhhhh-hc----CCCCCCCchH
Confidence 99998776777888888888 66789999999633 3455554332 23332 22 2345999999
Q ss_pred hhHHHHHHHHhcCCCHHHHHHHHHHHhhhhhh
Q 019448 297 AFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQ 328 (341)
Q Consensus 297 af~ag~~~~l~~g~~~~~a~~~a~~~Aa~~v~ 328 (341)
.|+|.|++++++|.++++|+..+..+-...++
T Consensus 218 L~sallla~lL~g~~~~~al~~~~~~V~evl~ 249 (281)
T COG2240 218 LFSALLLARLLEGLSLTQALERATAAVYEVLQ 249 (281)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988877776
|
|
| >PTZ00493 phosphomethylpyrimidine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.1e-09 Score=97.62 Aligned_cols=160 Identities=11% Similarity=0.063 Sum_probs=105.4
Q ss_pred ceEEEEeccccccCHHHHHHHHHHHHhC------CCeEEEeCCc------hhHH-HHHHHHH-HhhcCCCcEEecCHHHH
Q 019448 158 AKYFYIAGFFLTVSPDSIQLVAEHAAAN------NKVFMMNLSA------PFIC-EFFKDAL-EKVLPYMDYIFGNETEA 223 (341)
Q Consensus 158 ~~~v~i~~~~~~~~~~~~~~~~~~a~~~------~~~v~~d~~~------~~~~-~~~~~~~-~~~l~~~dvl~~n~~E~ 223 (341)
.+++=++- -.+.+.+..+.+..++. ..++++||-- .... ....+.+ +.++++++++.||..|+
T Consensus 74 i~aIKiGm---L~s~e~i~~v~~~l~~~~~~~~~~~~vVlDPVl~sssG~~L~~~~~~~~~~~~~Llp~a~viTPN~~Ea 150 (321)
T PTZ00493 74 IDVVKLGV---LYSKKIISLVHNYITNMNKKRGKKLLVVFDPVFVSSSGCLLVENLEYIKFALDLICPISCIITPNFYEC 150 (321)
T ss_pred CCEEEECC---cCCHHHHHHHHHHHHHhcccccCCCeEEECCceEECCCCccCCcHHHHHHHHHHhhccCEEECCCHHHH
Confidence 45566542 22566666666666554 2248899931 1111 1122222 46999999999999999
Q ss_pred HHHhhh----cCCCCCCHHHHHHHHhcCCcccc-CCccEEEEEeCCCc----------e--EEEEC--------------
Q 019448 224 RTFSKV----QGWETDDVEEIALKLSQWPKASE-IRKRTAVITQGADP----------V--VVAQD-------------- 272 (341)
Q Consensus 224 ~~l~~~----~~~~~~d~~~~~~~l~~~~~~~~-~~~~~vvvt~G~~G----------~--~~~~~-------------- 272 (341)
+.|++. ...+.++..++++++ .+ .|++.|+||-|... + +++..
T Consensus 151 ~~L~g~~~~~~~~~~~~~~~aA~~l------~~~~G~~~VliKGGh~~~~~~~~~~~~~~D~l~~~~~~~~~~~~~~~~~ 224 (321)
T PTZ00493 151 KVILEALDCQMDLSKANMTELCKLV------TEKLNINACLFKSCNVGENSAEENEVYAVDHLCIRNVGSYPTGEKQQID 224 (321)
T ss_pred HHHhCCCcccCCCCHHHHHHHHHHH------HHhcCCCEEEECcCCCcccccccccccceeEEecCCccccccccccccc
Confidence 999871 112344667888887 44 58999999976521 1 23321
Q ss_pred -C------eeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHHHhhhhhhh
Q 019448 273 -G------KLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQR 329 (341)
Q Consensus 273 -~------~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~Aa~~v~~ 329 (341)
+ +.+++... .....++.|.||+|++++++.|++|+++++|++.|...-..++..
T Consensus 225 ~~~~~~~~~~~~~~~~---ri~~~~~hGTGc~fASAIAa~LA~G~~l~~Av~~A~~fv~~aI~~ 285 (321)
T PTZ00493 225 AGGVTYLYDVYKLRSK---RKPGKDIHGTGCTLSTAIACYLAKKHNILQSCIESKKYIYNCIRY 285 (321)
T ss_pred cccccccceEEEEEec---ccCCCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 1 12333322 224456789999999999999999999999999999888777764
|
|
| >PRK09355 hydroxyethylthiazole kinase; Validated | Back alignment and domain information |
|---|
Probab=99.06 E-value=7.3e-09 Score=91.10 Aligned_cols=162 Identities=14% Similarity=0.094 Sum_probs=104.9
Q ss_pred hhhccceEEEEeccccccCHH---HHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC--CCcEEecCHHHHHHHh
Q 019448 153 ALVEKAKYFYIAGFFLTVSPD---SIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP--YMDYIFGNETEARTFS 227 (341)
Q Consensus 153 ~~l~~~~~v~i~~~~~~~~~~---~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~E~~~l~ 227 (341)
+.+..+|.+++..-. ...+ .+..+++.+++.++|+++||..........+..+++++ +.+++.||..|+..|+
T Consensus 50 ~~~~~~~alvi~~G~--l~~~~~~~i~~~~~~a~~~~~pvVlDpv~~~~~~~~~~~~~~ll~~~~~~vItPN~~E~~~L~ 127 (263)
T PRK09355 50 EMAKIAGALVINIGT--LTEERIEAMLAAGKIANEAGKPVVLDPVGVGATSYRTEFALELLAEVKPAVIRGNASEIAALA 127 (263)
T ss_pred HHHHhcCceEEeCCC--CCHHHHHHHHHHHHHHHhcCCCEEECCcccCcchhhHHHHHHHHHhcCCcEecCCHHHHHHHh
Confidence 456778888885322 2333 35555566788899999999653222111222233443 6899999999999998
Q ss_pred hhcC----CC----CCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhH
Q 019448 228 KVQG----WE----TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFV 299 (341)
Q Consensus 228 ~~~~----~~----~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ 299 (341)
+... .+ .++..+.++.+. ++....+++| |.. -++++++..+.++.-. ....+.+|+||++.
T Consensus 128 g~~~~~~~vd~~~~~~~~~~~a~~la------~~~~~~Vvvk-G~~-d~I~~~~~~~~~~~g~---~~~~~v~GtGc~L~ 196 (263)
T PRK09355 128 GEAAETKGVDSTDGSADAVEIAKAAA------KKYGTVVVVT-GEV-DYITDGERVVSVHNGH---PLMTKVTGTGCLLS 196 (263)
T ss_pred CCCcccCCcCCCCCHHHHHHHHHHHH------HHhCCEEEEE-CCC-cEEEeCCEEEEEeCCC---cccCCcccccHHHH
Confidence 7531 11 124556677773 3334568888 443 2445555555555211 14455699999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHhhhhh
Q 019448 300 GGFLSQLVQEKPIEECVRAGCYTSHVII 327 (341)
Q Consensus 300 ag~~~~l~~g~~~~~a~~~a~~~Aa~~v 327 (341)
|.+.+.+..|.++.+|+..|...-+.+-
T Consensus 197 ~~iaa~lA~g~~~~~A~~~A~~~~~~a~ 224 (263)
T PRK09355 197 AVVAAFAAVEKDYLEAAAAACAVYGIAG 224 (263)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999988886555443
|
|
| >TIGR00694 thiM hydroxyethylthiazole kinase | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.8e-08 Score=86.67 Aligned_cols=163 Identities=15% Similarity=0.072 Sum_probs=104.1
Q ss_pred hhhccceEEEEeccccccC--HHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC--CCcEEecCHHHHHHHhh
Q 019448 153 ALVEKAKYFYIAGFFLTVS--PDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP--YMDYIFGNETEARTFSK 228 (341)
Q Consensus 153 ~~l~~~~~v~i~~~~~~~~--~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~E~~~l~~ 228 (341)
+.+..++.+++..-.+ .+ .+.+..+++.++++++|+++||..........+...++++ +.+++.+|..|+..|++
T Consensus 45 ~~~~~~~al~ik~G~l-~~~~~~~i~~~~~~~~~~~~pvVlDPV~~~~s~~r~~~~~~Ll~~~~~~vITpN~~E~~~L~g 123 (249)
T TIGR00694 45 ELAKIAGALVINIGTL-DKESIEAMIAAGKSANELGVPVVLDPVGVGATKFRTETALELLSEGRFAAIRGNAGEIASLAG 123 (249)
T ss_pred HHHHHcCceEEeCCCC-CHHHHHHHHHHHHHHHhcCCCEEEcccccccchhHHHHHHHHHhhcCCceeCCCHHHHHHHhC
Confidence 4567788888865322 12 3445566677778889999999653322222232345665 47999999999999987
Q ss_pred hc----CCC----CCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHH
Q 019448 229 VQ----GWE----TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 300 (341)
Q Consensus 229 ~~----~~~----~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~a 300 (341)
.. +.+ .++..++++.+. ++....|++| |..- +++++++.+.+..-.. .....+|.||++.+
T Consensus 124 ~~~~~~gvd~~~~~~d~~~~a~~la------~~~~~~Vllk-G~~D-~i~~~~~~~~~~~g~~---~~~~~~GtGc~Lss 192 (249)
T TIGR00694 124 ETGLMKGVDSGEGAADAIRAAQQAA------QKYGTVVVIT-GEVD-YVSDGTSVYTIHNGTE---LLGKITGSGCLLGS 192 (249)
T ss_pred CCCCCCCcCCccchHHHHHHHHHHH------HHhCCEEEEE-CCCc-EEEeCCEEEEECCCCh---HHhCCccchHHHHH
Confidence 43 111 234556677763 3322367776 5433 4555665555432111 11224799999999
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHhhhhh
Q 019448 301 GFLSQLVQEKPIEECVRAGCYTSHVII 327 (341)
Q Consensus 301 g~~~~l~~g~~~~~a~~~a~~~Aa~~v 327 (341)
++.+.+.+|.++.+|+..|...-..+.
T Consensus 193 aIaa~LA~g~~~~~A~~~A~~~~~~a~ 219 (249)
T TIGR00694 193 VVAAFCAVEEDPLDAAISACLLYKIAG 219 (249)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999998875444443
|
This model represents the hydoxyethylthiazole kinase, ThiM, of a number of bacteria, and C-terminal domains of bifunctional thiamine biosynthesis proteins of Saccharomyces cerevisiae and Schizosaccharomyces pombe, in which the N-terminal domain corresponds to the bacterial thiamine-phosphate pyrophosphorylase (EC 2.5.1.3), ThiE. |
| >KOG2599 consensus Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.2e-07 Score=78.67 Aligned_cols=162 Identities=16% Similarity=0.175 Sum_probs=105.1
Q ss_pred hccceEEEEecccccc-CHHHHHHHHHHHHhCCCe--EEEeCC-----chhHHHHHHHHHHhhcC-CCcEEecCHHHHHH
Q 019448 155 VEKAKYFYIAGFFLTV-SPDSIQLVAEHAAANNKV--FMMNLS-----APFICEFFKDALEKVLP-YMDYIFGNETEART 225 (341)
Q Consensus 155 l~~~~~v~i~~~~~~~-~~~~~~~~~~~a~~~~~~--v~~d~~-----~~~~~~~~~~~~~~~l~-~~dvl~~n~~E~~~ 225 (341)
+..++.+. +|+..+. ....+..+.+..|+.+.. ..+||- ..+..+.-....++++. .+|++.||.=|++.
T Consensus 79 ~~~Y~~vL-TGY~~n~~~l~~i~~iv~~lk~~np~~~wv~DPVmGDnG~lYV~eelipvYr~~i~~ladiiTPNqFE~Ei 157 (308)
T KOG2599|consen 79 LNKYDAVL-TGYLPNVSFLQKIADIVKKLKKKNPNLTWVCDPVMGDNGRLYVPEELIPVYRDLIIPLADIITPNQFEAEI 157 (308)
T ss_pred ccccceee-eeccCChhHHHHHHHHHHHHHhcCCCeEEEeCccccCCccEeccHHHHHHHHHhhcchhhhcCCcchhhhh
Confidence 44677766 5555443 346677777878876644 666772 11222222333445554 59999999999999
Q ss_pred HhhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCC----ce-EEE---E-CCeeEEEeceecCCCcccCCCCCch
Q 019448 226 FSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGAD----PV-VVA---Q-DGKLKKFPVIVLPKDKLVDTNGAGD 296 (341)
Q Consensus 226 l~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~----G~-~~~---~-~~~~~~~~~~~~~~~~~vd~tGAGD 296 (341)
|++....+.+|.+++++.+ +.++++.||||...- |. +++ . +.+.+.+..+.+ . ---||.||
T Consensus 158 Ltg~~I~t~eda~~a~~~l------hq~~v~~vVITS~~~~~~~g~~l~c~gs~~~~~~f~~~ipki---~-~~FtGTGD 227 (308)
T KOG2599|consen 158 LTGMEIRTEEDAKRAVEKL------HQKGVKTVVITSFDLGEFTGETLRCIGSSCGSERFRYLIPKI---D-GVFTGTGD 227 (308)
T ss_pred hcCCeeccHHHHHHHHHHH------HHhCCCEEEEEeeeeCCCCCcEEEEEEeccCCceEEEEeccc---c-eEEecccH
Confidence 9998888888999999999 888999999997543 41 222 1 223333332211 2 23589999
Q ss_pred hhHHHHHHHHhcC---CCHHHHHHHHHHHhhhhh
Q 019448 297 AFVGGFLSQLVQE---KPIEECVRAGCYTSHVII 327 (341)
Q Consensus 297 af~ag~~~~l~~g---~~~~~a~~~a~~~Aa~~v 327 (341)
.|.|-+++.+..- .++..|++.+..+--..+
T Consensus 228 LfsaLLla~~~~~~~~~~l~~a~e~~ls~~~~vi 261 (308)
T KOG2599|consen 228 LFSALLLAWLHESPDNDDLSKAVEQVLSSVQAVI 261 (308)
T ss_pred HHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHH
Confidence 9999888877664 567777766655443333
|
|
| >PRK14039 ADP-dependent glucokinase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.8e-05 Score=73.44 Aligned_cols=218 Identities=13% Similarity=-0.014 Sum_probs=116.8
Q ss_pred eEEEEcCceeeeEeecChhHHHHh-----------------------------------CCCCCceEecccccccHHHHH
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKY-----------------------------------DIKLNNAILAEEKHLPLYDEM 50 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~ 50 (341)
.|+|-=++++|-+.++.++.++++ .++..+..+.+.+-+......
T Consensus 2 ~i~~aYN~NiDai~~l~~~~i~~li~~~~~~~v~~~~e~~p~~I~s~~Dl~~~~~~~mk~G~aAE~~v~n~~lf~~l~~~ 81 (453)
T PRK14039 2 NILCGYNVNIDSVYRITGAEIEELLRTFEKAEILEKIENPPGKILSLSDFVAGLIHCMKNGCGAEWLVFEQSVFEFLKNR 81 (453)
T ss_pred ceeeecccceeeeEeccHHHHHHHHHHcChHhHhHHhhcCCcccCCHHHHHHHHHHHHhCCCceEeeecCHHHHHHHHHh
Confidence 356777888999888886555543 122244455544322222221
Q ss_pred hccCCceEecCchHHHHHHHHHHHhcCCCcEEE-EeeeecCchhHHHHHHHHhcCcceeeee-------------cCCCC
Q 019448 51 ASKYNVEYIAGGATQNSIRVAQWMLQIPGATSY-IGCIGKDKFGEEMKKNSKLAGVNVHYYE-------------DESAS 116 (341)
Q Consensus 51 ~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~-i~~vG~D~~g~~i~~~l~~~gi~~~~~~-------------~~~~~ 116 (341)
.......+.||.|..+|..++. +|.++.+ .++ ..++..++.|.+.+|-..... ....+
T Consensus 82 -~~~~~~~rmGGnAgimAn~la~---lg~~~Vi~~~~----~lsk~q~~lf~~~~i~~p~~~~~~~l~~~~~~~a~~~~~ 153 (453)
T PRK14039 82 -FFDNSEIRMGGNAGIMANVLSE---LGASRVVPNVA----VPSKTQLSLFSKKAVYFPGMPLQASETDGEKVGASSSDQ 153 (453)
T ss_pred -hccCceEEeCChHHHHHHHHHh---cCCceEEEcCC----CCCHHHHHhcCCCCEEeccccccccccCccccccccCCC
Confidence 1245678999999998888875 4577544 332 233455666643333322110 01111
Q ss_pred ceeEEEEEe-CCccce-----eecccccccCCcc-----cCCC-cchhhhhc----cceEEEEeccccccC--------H
Q 019448 117 TGTCAVCVV-GGERSL-----VANLSAANCYKSE-----HLKK-PENWALVE----KAKYFYIAGFFLTVS--------P 172 (341)
Q Consensus 117 t~~~~~~~~-~g~~~~-----~~~~~~~~~~~~~-----~~~~-~~~~~~l~----~~~~v~i~~~~~~~~--------~ 172 (341)
...-+++-. .|++.. +..+.++..+-.. .+.. +++...+. .+|.++++|+++... .
T Consensus 154 d~IH~IfEy~~G~~~~l~~~~~~aPRaNRfI~s~D~~N~~l~i~e~f~~~l~e~~~~~D~avlSG~q~l~d~y~dg~~~~ 233 (453)
T PRK14039 154 EPIHFVFDFREGETFSLYGTRIRAPRENRFIATFDHLNFRLFINPAFEQYALEHAGEMDGALISGFHLLLETYPDGSTYR 233 (453)
T ss_pred CCceEEEEeCCCCEEecCCccEecCCCCeEEEecCCCCccceecHHHHHHHHhhccCCCEEEEechhhhhhhcCCcccHH
Confidence 222222222 344331 1222211111100 1111 22223333 789999999984311 2
Q ss_pred HHHHHHH---HHHH--hCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcC
Q 019448 173 DSIQLVA---EHAA--ANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQG 231 (341)
Q Consensus 173 ~~~~~~~---~~a~--~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~ 231 (341)
+.+.+.. +..+ ..++++-+.+.+..-.......+..+++++|.+=+|++|+..+....+
T Consensus 234 e~l~~~~~~i~~l~~~~~~i~iH~E~As~~~~~i~~~v~~~Ilp~VDSlGmNEqELa~l~~~~g 297 (453)
T PRK14039 234 EKLEDSLAQLKWWKSKNEKLRIHAELGHFASKEIANSVFLILAGIVDSIGMNEDELAMLANLHG 297 (453)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEecCcccHHHHHHHHHHhhcccccccCCHHHHHHHHHHcc
Confidence 3333333 3332 234689999987654445556677899999999999999999887644
|
|
| >PRK03979 ADP-specific phosphofructokinase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=3.2e-05 Score=72.10 Aligned_cols=76 Identities=14% Similarity=0.091 Sum_probs=51.8
Q ss_pred ccceEEEEeccccccC-----------HHHHHHHHHHHH--hCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHH
Q 019448 156 EKAKYFYIAGFFLTVS-----------PDSIQLVAEHAA--ANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETE 222 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~-----------~~~~~~~~~~a~--~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E 222 (341)
..+|+++++|++.... .+.+.+.++..+ ..++++-+.+.+..-.......+..+++++|.+-+|++|
T Consensus 221 ~~~D~avlSG~q~i~~~y~dg~~~~~~l~r~~~~i~~L~~~~~~i~iH~E~As~~~~~ir~~i~~~ilp~vDSlGmNE~E 300 (463)
T PRK03979 221 KMVDGAILSGYQGIKEEYSDGKTAEYYLKRAKEDIKLLKKKNKDIKIHVEFASIQNREIRKKIITYILPHVDSVGMDETE 300 (463)
T ss_pred cCCCEEEEechhhhhccccccccHHHHHHHHHHHHHHHhhCCCCceEEEEeccccCHHHHHHHHHhhccccccccCCHHH
Confidence 3499999999984221 122333444443 345788888876543344555566889999999999999
Q ss_pred HHHHhhhcC
Q 019448 223 ARTFSKVQG 231 (341)
Q Consensus 223 ~~~l~~~~~ 231 (341)
+..+....+
T Consensus 301 La~l~~~lg 309 (463)
T PRK03979 301 IANILNVLG 309 (463)
T ss_pred HHHHHHHhc
Confidence 998776544
|
|
| >KOG2598 consensus Phosphomethylpyrimidine kinase [Coenzyme transport and metabolism; Transcription] | Back alignment and domain information |
|---|
Probab=98.32 E-value=8.8e-06 Score=73.50 Aligned_cols=149 Identities=17% Similarity=0.232 Sum_probs=102.8
Q ss_pred CHHHHHHHHHHHHhCC-CeEEEeCC-----chhHH--HHHHHHHHhhcCCCcEEecCHHHHHHHhhhc------CCCCCC
Q 019448 171 SPDSIQLVAEHAAANN-KVFMMNLS-----APFIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQ------GWETDD 236 (341)
Q Consensus 171 ~~~~~~~~~~~a~~~~-~~v~~d~~-----~~~~~--~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~------~~~~~d 236 (341)
+++.+.-+.+.+...+ .++++||- +.... +.-.-..++++|.+|++.+|.-|+-.|.+.. ..+..|
T Consensus 103 ~~~I~~vi~q~l~~~~~~klVvDPVivatsG~~l~~~divsl~~e~l~P~adiltPNI~Ea~~Ll~~~~~~~~~i~~v~d 182 (523)
T KOG2598|consen 103 SPEIVKVIEQSLQKFNIPKLVVDPVIVATSGSSLAGKDIVSLFIEELLPFADILTPNIPEAFILLKKEKREISKIQSVFD 182 (523)
T ss_pred chHHHHHHHHHHHhhcCcceeecceEEeccCCcccCCccHHHHHHHhhhhHHHhCCChHHHHHHHhhcccCCcccccHHH
Confidence 3444444444444444 45888872 11111 1233335789999999999999999998742 222345
Q ss_pred HHHHHHHHhcCCccccCCccEEEEEeCCC-------------c---e-EEEECCeeEEEeceecCCCcccCCCCCchhhH
Q 019448 237 VEEIALKLSQWPKASEIRKRTAVITQGAD-------------P---V-VVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFV 299 (341)
Q Consensus 237 ~~~~~~~l~~~~~~~~~~~~~vvvt~G~~-------------G---~-~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ 299 (341)
.++.+..+ .+.|++.|+++-|.- . . .+|.+.+++.++.+-+ .-..+.|.|-+.+
T Consensus 183 i~~~~~~i------hk~gpk~VlvkGghiP~~~~~~~s~d~~~~~~~DvlydG~~F~~f~~~~~---~t~~tHGtgCtLa 253 (523)
T KOG2598|consen 183 IAKDAAKI------HKLGPKNVLVKGGHIPFNKNMMTSKDDSDKYTVDVLYDGKEFYIFKSPYL---ATKHTHGTGCTLA 253 (523)
T ss_pred HHHHHHHH------HhcCcceEEEeCCCcCccccccccCcccCCceEEEEEecceEEEeccccc---ccccccCccchHH
Confidence 66677777 788999999996631 1 1 3455666777665433 6678899999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHhhhhhh
Q 019448 300 GGFLSQLVQEKPIEECVRAGCYTSHVIIQ 328 (341)
Q Consensus 300 ag~~~~l~~g~~~~~a~~~a~~~Aa~~v~ 328 (341)
+++.+.|++|.++.+|++.|...---+++
T Consensus 254 SAIASnLA~g~sl~qAv~~ai~yvq~Ai~ 282 (523)
T KOG2598|consen 254 SAIASNLARGYSLLQAVQGAIEYVQNAIA 282 (523)
T ss_pred HHHHHHHhhcCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999876555554
|
|
| >TIGR02045 P_fruct_ADP ADP-specific phosphofructokinase | Back alignment and domain information |
|---|
Probab=98.29 E-value=0.00025 Score=65.90 Aligned_cols=76 Identities=14% Similarity=0.113 Sum_probs=53.8
Q ss_pred ccceEEEEeccccccC-----------HHHHHHHHHHHHh-CCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHH
Q 019448 156 EKAKYFYIAGFFLTVS-----------PDSIQLVAEHAAA-NNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEA 223 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~-----------~~~~~~~~~~a~~-~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~ 223 (341)
+..|.++++|++.... .+...+.++..+. .++++-+...+..-.......+..+++++|.+-+|++|+
T Consensus 208 ~~~d~~vlSG~q~m~~~y~dg~~~~~~~er~~~~i~~L~~~~~i~iH~E~As~~~~~l~~~i~~~ilp~vDSlGMNE~EL 287 (446)
T TIGR02045 208 EPVDGAILSGYQGIKEEYSDGKTAKYYLERAKEDIELLKKNKDLKIHVEFASIQNREIRKKVVTNIFPHVDSVGMDEAEI 287 (446)
T ss_pred hcccEEEEEchhhhhhhccCCccHhHHHHHHHHHHHHHhhCCCCeEEEEecccccHHHHHHHHHhhccccccccCCHHHH
Confidence 5689999999984211 1334455555533 668899998775544445555678899999999999999
Q ss_pred HHHhhhcC
Q 019448 224 RTFSKVQG 231 (341)
Q Consensus 224 ~~l~~~~~ 231 (341)
..+....+
T Consensus 288 a~ll~~lg 295 (446)
T TIGR02045 288 ANVLSVLG 295 (446)
T ss_pred HHHHHHhc
Confidence 99876543
|
Phosphofructokinase is a key enzyme of glycolysis. The phosphate group donor for different subtypes of phosphofructokinase can be ATP, ADP, or pyrophosphate. This family consists of ADP-dependent phosphofructokinases. Members are more similar to ADP-dependent glucokinases (excluded from this family) than to other phosphofructokinases. |
| >PF04587 ADP_PFK_GK: ADP-specific Phosphofructokinase/Glucokinase conserved region; InterPro: IPR007666 Although ATP is the most common phosphoryl group donor for kinases, certain hyperthermophilic archaea, such as Thermococcus litoralis and Pyrococcus furiosus, utilise unusual ADP-dependent glucokinases (ADPGKs) and phosphofructokinases (ADPPKKs) in their glycolytic pathways [, , ] | Back alignment and domain information |
|---|
Probab=98.20 E-value=2.6e-05 Score=73.49 Aligned_cols=77 Identities=21% Similarity=0.186 Sum_probs=48.2
Q ss_pred hccceEEEEecccccc----CH-------HHHHHHHHHHH-hCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHH
Q 019448 155 VEKAKYFYIAGFFLTV----SP-------DSIQLVAEHAA-ANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETE 222 (341)
Q Consensus 155 l~~~~~v~i~~~~~~~----~~-------~~~~~~~~~a~-~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E 222 (341)
...+|+++++|+++.. +. +.+.+.++..+ ..++++-+.+.+..-...-...+..+++++|.+=+|++|
T Consensus 207 ~~~~d~~vlSGlq~l~~~~~d~~~~~~~l~~~~~~i~~l~~~~~~~iH~E~As~~d~~l~~~i~~~ilp~vDSlGmNEqE 286 (444)
T PF04587_consen 207 AFKPDLAVLSGLQMLDEFYFDGETYEERLKRLKEQIKLLKSNPDIPIHLELASFADEELRKEILEKILPHVDSLGMNEQE 286 (444)
T ss_dssp HTT-SEEEEE-GGG--TB-TTSTCHHHHHHHHHHHHHHHH-HTT-EEEEE----SSHHHHHHHHHHHGGGSSEEEEEHHH
T ss_pred ccCCCEEEEeccccchhhccchhHHHHHHHHHHHHHHhccCCCCCceEEEeccccCHHHHHHHHHHhhccccccccCHHH
Confidence 3459999999998532 11 22333334455 577899999987554444556667899999999999999
Q ss_pred HHHHhhhcC
Q 019448 223 ARTFSKVQG 231 (341)
Q Consensus 223 ~~~l~~~~~ 231 (341)
+..+....+
T Consensus 287 L~~l~~~lg 295 (444)
T PF04587_consen 287 LANLLSVLG 295 (444)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhC
Confidence 998866543
|
ADPGKs and ADPPFKs exhibit significant similarity, and form an ADP-dependent kinase (ADPK) family, which was tentatively named the PFKC family []. A ~460-residue ADPK domain is also found in a bifunctional ADP-dependent gluco/phosphofructo- kinase (ADP-GK/PFK) from Methanocaldococcus jannaschii (Methanococcus jannaschii) as well as in homologous hypothetical proteins present in several eukaryotes []. The whole structure of the ADPK domain can be divided into large and small alpha/beta subdomains. The larger subdomain, which carries the ADP binding site, consists of a twisted 12-stranded beta sheet flanked on both faces by 13 alpha helices and three 3(10) helices, forming an alpha/beta 3-layer sandwich. The smaller subdomain, which covers the active site, forms an alpha/beta two-layer structure containing 5 beta strands and four alpha helices. The ADP molecule is buried in a shallow pocket in the large subdomain. The binding of substrate sugar induces a structural change, the small domain closing to form a complete substrate sugar binding site [, , ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 1GC5_A 1L2L_A 3DRW_B 1U2X_A 1UA4_A. |
| >PRK14038 ADP-dependent glucokinase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.006 Score=56.96 Aligned_cols=79 Identities=14% Similarity=0.081 Sum_probs=52.3
Q ss_pred hhhccceEEEEeccccccC---HHHHH---HHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHH
Q 019448 153 ALVEKAKYFYIAGFFLTVS---PDSIQ---LVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTF 226 (341)
Q Consensus 153 ~~l~~~~~v~i~~~~~~~~---~~~~~---~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l 226 (341)
+....+|+++++|++.... .+.+. ..++..++.++++-+++.+.. ....++.+.++++++|-+-+|++|+..+
T Consensus 220 ei~~~~Dl~vlSG~q~l~~~~~~~~l~~~~~~l~~l~~~~i~iH~EfAs~~-d~~~r~~i~~ilp~vDSlGmNE~ELa~l 298 (453)
T PRK14038 220 EIAKKAELAIISGLQALTEENYREPFETVREHLKVLNERGIPAHLEFAFTP-DETVREEILGLLGKFYSVGLNEVELASI 298 (453)
T ss_pred hhccCCCEEEEEchhhhccccHHHHHHHHHHHHHhcCcCCceEEEEeeccc-hHHHHHHHHhhCccccccccCHHHHHHH
Confidence 3446799999999984221 22333 333333445688888887542 2223444557899999999999999988
Q ss_pred hhhcCC
Q 019448 227 SKVQGW 232 (341)
Q Consensus 227 ~~~~~~ 232 (341)
....+.
T Consensus 299 l~~lg~ 304 (453)
T PRK14038 299 MEVMGE 304 (453)
T ss_pred HHHhcc
Confidence 775443
|
|
| >PF02110 HK: Hydroxyethylthiazole kinase family; InterPro: IPR000417 Thiamine pyrophosphate (TPP), a required cofactor for many enzymes in the cell, is synthesised de novo in Salmonella typhimurium [] | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.0017 Score=55.95 Aligned_cols=159 Identities=18% Similarity=0.125 Sum_probs=95.0
Q ss_pred hhhhccceEEEEecccccc-CHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhc--CCCcEEecCHHHHHHHhh
Q 019448 152 WALVEKAKYFYIAGFFLTV-SPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVL--PYMDYIFGNETEARTFSK 228 (341)
Q Consensus 152 ~~~l~~~~~v~i~~~~~~~-~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l--~~~dvl~~n~~E~~~l~~ 228 (341)
.+..+-++.++++--++.. ..+.+....+.+.++++|+++||-.....+.-.+..++++ .+.++|+.|..|...|.+
T Consensus 44 ~e~~~~a~al~iNiGTl~~~~~~~m~~A~~~A~~~~~PvVLDPVgvGas~~R~~~~~~LL~~~~~~vIrGN~sEI~aLag 123 (246)
T PF02110_consen 44 EEFASIADALVINIGTLTDERIEAMKKAAKAANELGIPVVLDPVGVGASKFRTEFALELLNNYKPTVIRGNASEIAALAG 123 (246)
T ss_dssp HHHHHCTSEEEEESTTSSHHHHHHHHHHHHHHHHTT--EEEE-TTBTTBHHHHHHHHHHHCHS--SEEEEEHHHHHHHHT
T ss_pred HHHHHHcCEEEEECCCCCHhHHHHHHHHHHHHHHcCCCEEEeCcccCCcHHHHHHHHHHHHhCCCcEEEeCHHHHHHHhC
Confidence 3556778888886433211 1356778888899999999999965433333344466777 468999999999999987
Q ss_pred hc----CCCC----CCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHH
Q 019448 229 VQ----GWET----DDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 300 (341)
Q Consensus 229 ~~----~~~~----~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~a 300 (341)
.. +.+. .+..+.++.+.+ +.+ ..|++| |+.-.. .++...+.++.= +.-.-..||.|+...|
T Consensus 124 ~~~~~kGVDs~~~~~~~~~~a~~lA~-----k~~-~vVvvT-G~~D~I-sdg~~~~~i~nG---~~~l~~itGtGC~lga 192 (246)
T PF02110_consen 124 EDSKAKGVDSGDSDEDAIEAAKQLAQ-----KYN-CVVVVT-GEVDYI-SDGNRVYRIPNG---SPLLSKITGTGCMLGA 192 (246)
T ss_dssp CCCCSCSSSSSCGSHHHHHHHHHHHH-----HTT-SEEEEE-SSSEEE-EESSCEEEECSS---SGGGGGSTTHHHHHHH
T ss_pred cCCCCCCcCcCCcchHHHHHHHHHHH-----hcC-CEEEEe-cCCcEE-ECCCeEEEeCCC---ChHhcceeccchHHHH
Confidence 53 2221 113466666643 222 344555 665543 345555555432 1244567999999877
Q ss_pred HHHHHHhcCCCHHHHHHHHHH
Q 019448 301 GFLSQLVQEKPIEECVRAGCY 321 (341)
Q Consensus 301 g~~~~l~~g~~~~~a~~~a~~ 321 (341)
-+.+.+.-..+.-++...|..
T Consensus 193 liaaf~av~~d~~~aa~~a~~ 213 (246)
T PF02110_consen 193 LIAAFLAVAEDPLEAAVAAVA 213 (246)
T ss_dssp HHHHHHCCCSSHHHHHHHHHH
T ss_pred HHHHHHhccccchHHHHHHHH
Confidence 777777665666666554443
|
Five kinase activities have been implicated in TPP synthesis, which involves joining a 4-methyl-5-(beta-hydroxyethyl)thiazole (THZ) moiety and a 4-amino-5- hydroxymethyl-2-methylpyrimidine (HMP) moiety [, ]. THZ kinase (2.7.1.50 from EC) activity is involved in the salvage synthesis of TH-P from the thiazole: |
| >KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00096 Score=56.69 Aligned_cols=167 Identities=15% Similarity=0.227 Sum_probs=105.0
Q ss_pred hhhccceEEEEeccccccCH---HHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhh
Q 019448 153 ALVEKAKYFYIAGFFLTVSP---DSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKV 229 (341)
Q Consensus 153 ~~l~~~~~v~i~~~~~~~~~---~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~ 229 (341)
..+.+-++++|++ .+..++ ..+..+++.++++++|+++|..+-+......+.+-.-.+ .-++.||.-|+.+|++.
T Consensus 97 k~L~RlhavVIGP-GLGRdp~~~k~i~~iley~~~~dvP~VIDaDGL~Lv~q~~e~l~~~~~-~viLTPNvvEFkRLcd~ 174 (306)
T KOG3974|consen 97 KLLQRLHAVVIGP-GLGRDPAILKEIAKILEYLRGKDVPLVIDADGLWLVEQLPERLIGGYP-KVILTPNVVEFKRLCDA 174 (306)
T ss_pred HHHhheeEEEECC-CCCCCHHHHHHHHHHHHHHhcCCCcEEEcCCceEehhhchhhhhccCc-eeeeCCcHHHHHHHHHH
Confidence 3577788999876 344444 567889999999999999999876544444432211122 24777999999999986
Q ss_pred cCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHh--
Q 019448 230 QGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLV-- 307 (341)
Q Consensus 230 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~-- 307 (341)
...+ .|....+..|.. +. ....|+-.|+...++..+.+.+..+ .+ -...-.-|-||..++.+..-+.
T Consensus 175 ~l~~-~d~~~~~~~L~~-----~l-~nv~vvqKG~~D~ils~~~ev~~~s-~e---Gs~kRcGGQGDiLaGsla~fl~w~ 243 (306)
T KOG3974|consen 175 ELDK-VDSHSQMQHLAA-----EL-MNVTVVQKGESDKILSPDSEVRVCS-TE---GSLKRCGGQGDILAGSLATFLSWA 243 (306)
T ss_pred hhcc-ccchHHHHHHHH-----Hh-cCeEEEEecCCceeeCCCCeeEEcc-CC---CCccccCCCcchhhhHHHHHHHHH
Confidence 4422 233344444421 11 2346777788776555444443332 22 1445566899999887765442
Q ss_pred --cCCCHHHHHHHHHHHhhhhhhhccc
Q 019448 308 --QEKPIEECVRAGCYTSHVIIQRSGC 332 (341)
Q Consensus 308 --~g~~~~~a~~~a~~~Aa~~v~~~g~ 332 (341)
.....+++...|..+++..++..|.
T Consensus 244 k~~~~e~~~~~~~a~~a~s~~vr~a~r 270 (306)
T KOG3974|consen 244 KLLSGEQDSAAFLAAVAGSIMVRRAGR 270 (306)
T ss_pred HhccCCccchhhhhhhhhHHHHHHHHH
Confidence 2345557788888888877766554
|
|
| >PF01256 Carb_kinase: Carbohydrate kinase; InterPro: IPR000631 This family is related to Hydroxyethylthiazole kinase IPR000417 from INTERPRO and PfkB carbohydrate kinase IPR011611 from INTERPRO implying that it also a carbohydrate kinase | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00063 Score=58.93 Aligned_cols=153 Identities=19% Similarity=0.140 Sum_probs=96.9
Q ss_pred hhhccceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCC
Q 019448 153 ALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGW 232 (341)
Q Consensus 153 ~~l~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~ 232 (341)
..+++.|.+++.+ .+....+ ...+++...+...++++|...-....... ...+.--++.|+..|+.+|++....
T Consensus 63 ~~~~~~~av~iGP-Glg~~~~-~~~~~~~~~~~~~p~VlDADaL~~l~~~~----~~~~~~~IlTPH~gE~~rL~~~~~~ 136 (242)
T PF01256_consen 63 ELLEKADAVVIGP-GLGRDEE-TEELLEELLESDKPLVLDADALNLLAENP----KKRNAPVILTPHPGEFARLLGKSVE 136 (242)
T ss_dssp HHHCH-SEEEE-T-T-SSSHH-HHHHHHHHHHHCSTEEEECHHHHCHHHCC----CCSSSCEEEE-BHHHHHHHHTTTCH
T ss_pred hhhccCCEEEeec-CCCCchh-hHHHHHHHHhhcceEEEehHHHHHHHhcc----ccCCCCEEECCCHHHHHHHhCCccc
Confidence 4578899999975 3333333 33455555666777999986533211100 1233456777999999999986432
Q ss_pred CCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCH
Q 019448 233 ETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPI 312 (341)
Q Consensus 233 ~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~ 312 (341)
..++..++++++.+ +. +.+|+=.|..-.....+++.+..+.- ..-.-+-|.||+.++-+..-+.++.++
T Consensus 137 ~~~~~~~~a~~~a~-----~~--~~~vvLKG~~t~I~~p~~~~~~n~~g----n~~la~gGsGDvLaGii~~llaq~~~~ 205 (242)
T PF01256_consen 137 IQEDRIEAAREFAK-----EY--GAVVVLKGAVTIIASPGGRVYVNPTG----NPGLATGGSGDVLAGIIAGLLAQGYDP 205 (242)
T ss_dssp HCCSHHHHHHHHHH-----HH--TSEEEEESTSSEEEEETSEEEEE--------GGGSSTTHHHHHHHHHHHHHHHTSSH
T ss_pred chhhHHHHHHHHHh-----hc--CcEEEEeCCCcEEEecCcceeEeCCC----CCCCCCCCcccHHHHHHHHHHHccCCH
Confidence 34567777777743 22 33555557766665556666655432 255778899999998888888999999
Q ss_pred HHHHHHHHHH
Q 019448 313 EECVRAGCYT 322 (341)
Q Consensus 313 ~~a~~~a~~~ 322 (341)
.+|...|+..
T Consensus 206 ~~Aa~~av~l 215 (242)
T PF01256_consen 206 FEAACLAVYL 215 (242)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999888754
|
Several uncharacterised proteins have been shown to share regions of similarities, including yeast chromosome XI hypothetical protein YKL151c; Caenorhabditis elegans hypothetical protein R107.2; Escherichia coli hypothetical protein yjeF; Bacillus subtilis hypothetical protein yxkO; Helicobacter pylori hypothetical protein HP1363; Mycobacterium tuberculosis hypothetical protein MtCY77.05c; Mycobacterium leprae hypothetical protein B229_C2_201; Synechocystis sp. (strain PCC 6803) hypothetical protein sll1433; and Methanocaldococcus jannaschii (Methanococcus jannaschii) hypothetical protein MJ1586. These are proteins of about 30 to 40 kDa whose central region is well conserved.; PDB: 3RSG_A 3RT9_A 3RRF_A 3RTB_A 3RRE_A 3RS9_A 3RSS_A 3RRB_A 3RTA_A 3RTD_A .... |
| >PRK10565 putative carbohydrate kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.0015 Score=62.88 Aligned_cols=150 Identities=19% Similarity=0.093 Sum_probs=90.2
Q ss_pred hhccceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCC
Q 019448 154 LVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWE 233 (341)
Q Consensus 154 ~l~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~ 233 (341)
.+..+|.++++.- +..+ +....+++.+.+.+.|+++|+..-.+...... .....+|.||..|+.+|++....+
T Consensus 317 ~~~~~~a~viGpG-lg~~-~~~~~~~~~~~~~~~P~VLDAdaL~ll~~~~~-----~~~~~VLTPh~gE~~rL~~~~~~~ 389 (508)
T PRK10565 317 SLEWADVVVIGPG-LGQQ-EWGKKALQKVENFRKPMLWDADALNLLAINPD-----KRHNRVITPHPGEAARLLGCSVAE 389 (508)
T ss_pred HhhcCCEEEEeCC-CCCC-HHHHHHHHHHHhcCCCEEEEchHHHHHhhCcc-----ccCCeEECCCHHHHHHHhCCChhh
Confidence 3467788888752 2222 33355557777778899999976432111110 122468999999999998732211
Q ss_pred C-CCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCH
Q 019448 234 T-DDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPI 312 (341)
Q Consensus 234 ~-~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~ 312 (341)
. .+..+.++.+. +..-..+|+ .|..- ++.+.++..++...- ..-.-++|.||+.+|.+.+-+.++.++
T Consensus 390 v~~~~~~~a~~~a------~~~~~~vvl-KG~~~-iI~~~~~~~~~~~~G---~~~ma~~GsGDvLaGiIaalla~g~~~ 458 (508)
T PRK10565 390 IESDRLLSARRLV------KRYGGVVVL-KGAGT-VIAAEPDALAIIDVG---NAGMASGGMGDVLSGIIGALLGQKLSP 458 (508)
T ss_pred hhhhHHHHHHHHH------HHhCCEEEE-eCCCc-EEEcCCceEEEECCC---CCCCCCCChHHHHHHHHHHHHHcCCCH
Confidence 1 23445566553 222234555 45543 444433333333211 244567999999999888888889899
Q ss_pred HHHHHHHHH
Q 019448 313 EECVRAGCY 321 (341)
Q Consensus 313 ~~a~~~a~~ 321 (341)
.+|+..|+.
T Consensus 459 ~~Aa~~a~~ 467 (508)
T PRK10565 459 YDAACAGCV 467 (508)
T ss_pred HHHHHHHHH
Confidence 888888874
|
|
| >COG2145 ThiM Hydroxyethylthiazole kinase, sugar kinase family [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0049 Score=52.75 Aligned_cols=156 Identities=17% Similarity=0.121 Sum_probs=95.1
Q ss_pred hhhccceEEEEeccccc-cCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCC--CcEEecCHHHHHHHhhh
Q 019448 153 ALVEKAKYFYIAGFFLT-VSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPY--MDYIFGNETEARTFSKV 229 (341)
Q Consensus 153 ~~l~~~~~v~i~~~~~~-~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~--~dvl~~n~~E~~~l~~~ 229 (341)
+..+-++.++|+--++. ...+.+...++.+.+.+.|+++||-...-.+.-++...+++.+ .++|..|.-|...|.+.
T Consensus 51 e~~kia~AL~INIGTL~~~~~~~m~~A~~~An~~~~PvvLDPVgvgAt~~R~~~~~~LL~~~~~~~IrGN~sEI~~Lag~ 130 (265)
T COG2145 51 EFAKIADALLINIGTLSAERIQAMRAAIKAANESGKPVVLDPVGVGATKFRTKFALELLAEVKPAAIRGNASEIAALAGE 130 (265)
T ss_pred HHHHhccceEEeeccCChHHHHHHHHHHHHHHhcCCCEEecCccCCchHHHHHHHHHHHHhcCCcEEeccHHHHHHHhcc
Confidence 44556677777644432 2346788888999999999999996543333333445667653 69999999999999864
Q ss_pred c----CCC----CCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHH
Q 019448 230 Q----GWE----TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 301 (341)
Q Consensus 230 ~----~~~----~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag 301 (341)
. |.+ ..++.++++.+.+ +.+ ..+++| |+... +.++++.+.+.-- +.-.-..||+|+...|-
T Consensus 131 ~~~~kGVDa~~~~~~~~~~a~~~A~-----~~~-~vvvvT-G~vD~-Isdg~~~~~i~nG---~pll~~ItGtGCllgav 199 (265)
T COG2145 131 AGGGKGVDAGDGAADAIEAAKKAAQ-----KYG-TVVVVT-GEVDY-ISDGTRVVVIHNG---SPLLGKITGTGCLLGAV 199 (265)
T ss_pred cccccccccccchhhHHHHHHHHHH-----HhC-cEEEEE-CCeeE-EEcCCeEEEEECC---CcHHhhhhccccHHHHH
Confidence 3 222 3455566666532 222 335555 65443 2344454444321 11344678999988777
Q ss_pred HHHHHhcCCC-HHHHHHHH
Q 019448 302 FLSQLVQEKP-IEECVRAG 319 (341)
Q Consensus 302 ~~~~l~~g~~-~~~a~~~a 319 (341)
..+.+....+ +-+|..-|
T Consensus 200 ~aaF~av~~d~~~~A~~~A 218 (265)
T COG2145 200 VAAFLAVEKDPLLDAAAEA 218 (265)
T ss_pred HHHHHhcCCCHHHHHHHHH
Confidence 7776666666 34444443
|
|
| >cd01938 ADPGK_ADPPFK ADP-dependent glucokinase (ADPGK) and phosphofructokinase (ADPPFK) | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.043 Score=51.71 Aligned_cols=190 Identities=14% Similarity=0.054 Sum_probs=96.6
Q ss_pred CCCCCceEecccccccHHHHHh-ccCCceEecCchHHHHHHHHHHHhcCCC-cEEEEeeeecCchhHHHHHHHHhcCcce
Q 019448 30 DIKLNNAILAEEKHLPLYDEMA-SKYNVEYIAGGATQNSIRVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSKLAGVNV 107 (341)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~GG~a~n~a~~l~~l~~lg~-~v~~i~~vG~D~~g~~i~~~l~~~gi~~ 107 (341)
.+...+..+.+.+-+....... .......+.||.|.-+|..++. +|. +|.+-+++.. +.....+.+.+|-.
T Consensus 74 ~G~aAEr~v~n~~lf~~l~~~~~~~~~~~~~mGGnAgimAn~la~---~g~~~Vil~~p~~~----k~~~~L~~d~~i~~ 146 (445)
T cd01938 74 RGAAAERFVSSEEVFEYLVEWAKEIPWDELRMGGNAGLMANRLAG---EGDLKVLLGVPQSS----KLQAELFLDGPIVV 146 (445)
T ss_pred CCCceEeeecCHHHHHHHHHHhhccCCceEEeCChHHHHHHHHHh---cCCceEEEecCCCc----HHHHHhCCCCCeee
Confidence 4444555555543322222211 1224568999999888888775 557 7777776543 22233333222211
Q ss_pred eeeecCCCCceeEEEEEe-CCcc-----------ceeecccccccCCcccCCCcchh-hhhcc-ceEEEEecccccc---
Q 019448 108 HYYEDESASTGTCAVCVV-GGER-----------SLVANLSAANCYKSEHLKKPENW-ALVEK-AKYFYIAGFFLTV--- 170 (341)
Q Consensus 108 ~~~~~~~~~t~~~~~~~~-~g~~-----------~~~~~~~~~~~~~~~~~~~~~~~-~~l~~-~~~v~i~~~~~~~--- 170 (341)
........+...-+++-. .|++ -++.....+. +. ..++.. ...+. +|+++++|+.+..
T Consensus 147 p~~e~~~~~d~IHlIlEy~~G~~~~~~~aPraNRfI~~~d~~n~-l~----~~ee~~~~i~~~~pDl~vlSGlqmm~~~~ 221 (445)
T cd01938 147 PTFENLIEEDEIHLILEYPRGESWGDFVAPRANRFIFHDDDNNP-ML----MREEFFSSILEFQPDLAVLSGLQMMEGQS 221 (445)
T ss_pred cccccCCCCCccEEEEEcCCCCEecceEcCCCCeEEEecCCcch-hh----hhHHHHHHHhhcCCCEEEEechhhhcccC
Confidence 111100111222222222 3432 2222211111 10 001112 22333 8999999998422
Q ss_pred -CHHHHHHHHHHHH----h--CCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcC
Q 019448 171 -SPDSIQLVAEHAA----A--NNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQG 231 (341)
Q Consensus 171 -~~~~~~~~~~~a~----~--~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~ 231 (341)
+.....+.++.++ . ..+++-+.+.+..-...-.+.+..+++++|-+=+|++|+..+....+
T Consensus 222 ~~~~~~~~~l~~~~~~l~~l~~~i~iH~E~As~~d~~l~~~i~~~ilp~VDSlGmNEqEL~~l~~~lg 289 (445)
T cd01938 222 FDEGTRKELLERVKSILEILPPLIPIHLELASTVDEELREEILHEVVPYVDSLGLNEQELANLLQVLG 289 (445)
T ss_pred CChhhHHHHHHHHHHHHHhccccCcEEEEecccccHHHHHHHHHHhcccccccccCHHHHHHHHHHhC
Confidence 1233333333322 2 23778888876543344555567889999999999999998876543
|
ADPGK and ADPPFK are proteins that rely on ADP rather than ATP to donate a phosphoryl group. They are found in certain hyperthermophilic archaea and in higher eukaryotes. A functional ADPGK has been characterized in mouse and is assumed to be desirable during ischemia/hypoxia. ADPGK and ADPPFK contain a large and a small domain with the binding site located in a groove between the domains. Partial domain closing is seen when ADP is bound, and further domain closing is observed when glucose is also bound. The oligomerization state apparently varies depending on the species, with some existing as monomers, some as dimers, and some as tetramers. |
| >COG0063 Predicted sugar kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.31 Score=43.18 Aligned_cols=138 Identities=21% Similarity=0.167 Sum_probs=71.9
Q ss_pred hccceEEEEeccccccCHHHHHHHHHHHHhCC-CeEEEeCCchhHHHHHHHHHHhhcCC-CcEEecCHHHHHHHhhhcC-
Q 019448 155 VEKAKYFYIAGFFLTVSPDSIQLVAEHAAANN-KVFMMNLSAPFICEFFKDALEKVLPY-MDYIFGNETEARTFSKVQG- 231 (341)
Q Consensus 155 l~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~-~~v~~d~~~~~~~~~~~~~~~~~l~~-~dvl~~n~~E~~~l~~~~~- 231 (341)
.+..|.+++++ .+....+. .++++..-+.. .++++|...-..- .....+... .-|+.|+.-|+.+|++...
T Consensus 99 ~~~~~avviGp-GlG~~~~~-~~~~~~~l~~~~~p~ViDADaL~~l----a~~~~~~~~~~~VlTPH~gEf~rL~g~~~~ 172 (284)
T COG0063 99 VERADAVVIGP-GLGRDAEG-QEALKELLSSDLKPLVLDADALNLL----AELPDLLDERKVVLTPHPGEFARLLGTEVD 172 (284)
T ss_pred hccCCEEEECC-CCCCCHHH-HHHHHHHHhccCCCEEEeCcHHHHH----HhCcccccCCcEEECCCHHHHHHhcCCccc
Confidence 46788899874 23333332 23333333333 7888888653210 001122222 2566799999999987422
Q ss_pred CCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcC
Q 019448 232 WETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE 309 (341)
Q Consensus 232 ~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g 309 (341)
....+..+.++.+.+ + .+.+||=.|..-.....+++.+..+ .- ..-.-+-|.||+.++-+.+-|.++
T Consensus 173 ~~~~~r~~~a~~~a~------~-~~~vvVLKG~~tvI~~~~g~~~~n~-~G---~~~ma~GGtGDvLaGii~alLAq~ 239 (284)
T COG0063 173 EIEVDRLEAARELAA------K-YGAVVVLKGAVTVIADPDGEVFVNP-TG---NPGMATGGTGDVLAGIIGALLAQG 239 (284)
T ss_pred ccccchHHHHHHHHH------H-cCCEEEEeCCCCEEEcCCCcEEEcC-CC---CHHhccCcchHHHHHHHHHHHhCC
Confidence 112344566666632 1 2335555566555443222333322 11 133445699999766555555555
|
|
| >COG4809 Archaeal ADP-dependent phosphofructokinase/glucokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.20 E-value=2.6 Score=38.60 Aligned_cols=79 Identities=13% Similarity=0.071 Sum_probs=54.7
Q ss_pred hhhccceEEEEecccccc----CH-------HHHHHHHHHHHh-CCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCH
Q 019448 153 ALVEKAKYFYIAGFFLTV----SP-------DSIQLVAEHAAA-NNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNE 220 (341)
Q Consensus 153 ~~l~~~~~v~i~~~~~~~----~~-------~~~~~~~~~a~~-~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~ 220 (341)
+..+..|...++|++.-. +. +...+-++..++ .++++-+.+.+..-...-.+.+..++++++-+=+|+
T Consensus 221 ~i~~~vDgaiiSGyq~l~eey~dg~t~~~yle~s~e~i~~lk~~~~irvHlEfas~~d~~irk~i~~~il~~v~SvGldE 300 (466)
T COG4809 221 EIAKEVDGAIISGYQGLKEEYSDGSTYKYYLERSREDIKALKDRENIRVHLEFASIQDRKIRKEILTNILSIVYSVGLDE 300 (466)
T ss_pred HHhhhcceeeeechhhhhhhcCCCCcHHHHHHHHHHHHHHHhccccceEEEEecccccHHHHHHHHHHHHhhhhhcCCCH
Confidence 455779999999998411 11 233344444555 678888888765544445566777999999999999
Q ss_pred HHHHHHhhhcC
Q 019448 221 TEARTFSKVQG 231 (341)
Q Consensus 221 ~E~~~l~~~~~ 231 (341)
.|+..+....+
T Consensus 301 ~ElA~vl~vlG 311 (466)
T COG4809 301 VELANVLNVLG 311 (466)
T ss_pred HHHHHHHHhhC
Confidence 99987766554
|
|
| >KOG4184 consensus Predicted sugar kinase [Carbohydrate transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=88.02 E-value=3.8 Score=36.95 Aligned_cols=184 Identities=14% Similarity=0.155 Sum_probs=93.3
Q ss_pred eEecccccccH-HHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEeeeecCchhHHHHHHHHhcCcceeeeecCC
Q 019448 36 AILAEEKHLPL-YDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDES 114 (341)
Q Consensus 36 ~~~~~~~~~~~-~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~ 114 (341)
++.++.+.+.. ..+......+.++.||++.-+|+-... . ..+.++|+.|.-.. +-.+-+ -+.+..-++++
T Consensus 117 R~Man~~~F~v~~Ak~~~~~R~~~~mGGNA~LMA~R~~~--~--~~~~LlG~~~~R~~----~~L~P~-~~R~~~~~I~~ 187 (478)
T KOG4184|consen 117 RVMANSTLFTVGYAKVMDKERINWYMGGNAPLMAVRFFM--E--GAQVLLGAHMSRKL----RPLLPK-EIRLAGDEIPN 187 (478)
T ss_pred hhhcccchhhhhhhhhhhhhhhhhhccCCchHHHHHHHh--c--cceeeecccccchh----ccccch-hhhcccCcCcC
Confidence 34444444432 223444456778999988887776552 2 58899999886432 211111 13333333333
Q ss_pred CCceeEEEEEeCCccce-eeccccc------ccCCcccCCCcchhhhh--ccceEEEEecccc-cc-CHH----HHHHHH
Q 019448 115 ASTGTCAVCVVGGERSL-VANLSAA------NCYKSEHLKKPENWALV--EKAKYFYIAGFFL-TV-SPD----SIQLVA 179 (341)
Q Consensus 115 ~~t~~~~~~~~~g~~~~-~~~~~~~------~~~~~~~~~~~~~~~~l--~~~~~v~i~~~~~-~~-~~~----~~~~~~ 179 (341)
.+.... ..+..|+..- ...+.++ ++.++...-.+.+.+.+ -.+|+++++|..+ +. +.+ .+.++-
T Consensus 188 DdiHlI-LEYK~Gd~~G~~VAP~anR~I~~~D~~n~~m~~~E~f~~Al~~fqPdLvVvsGlhmme~qske~r~~rl~~V~ 266 (478)
T KOG4184|consen 188 DDIHLI-LEYKAGDKWGPYVAPRANRYILHNDRNNPHMRAVEQFTDALKMFQPDLVVVSGLHMMEMQSKEEREARLQQVV 266 (478)
T ss_pred CceEEE-EEeccCCcccccccccccceeeecCCCChHHHHHHHHHHHHHHhCCCEEEEechhHHhhhhHHHHHHHHHHHH
Confidence 222211 1222333210 1111111 12222211111222333 3579999999874 22 222 233333
Q ss_pred HHHH--hCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhh
Q 019448 180 EHAA--ANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKV 229 (341)
Q Consensus 180 ~~a~--~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~ 229 (341)
+... ..|+++-++..+..-.....+..-+.+|++|-+=+|++|+.-|...
T Consensus 267 r~L~~iP~gip~HlElaS~~~~~l~~~i~h~VlPyVdSLGlNEQEL~fL~q~ 318 (478)
T KOG4184|consen 267 RSLSDIPTGIPVHLELASMTNRELMSSIVHQVLPYVDSLGLNEQELLFLTQS 318 (478)
T ss_pred HHHhcCCCCCchhhhHhHHHHHHHHHHHHHHhhhhccccCCCHHHHHHHHHH
Confidence 3332 2456777777654322223444557899999999999999888654
|
|
| >PRK10076 pyruvate formate lyase II activase; Provisional | Back alignment and domain information |
|---|
Probab=86.36 E-value=3.5 Score=34.99 Aligned_cols=68 Identities=10% Similarity=-0.000 Sum_probs=50.4
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEec-----CHHHHHHHhh
Q 019448 157 KAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFG-----NETEARTFSK 228 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~-----n~~E~~~l~~ 228 (341)
+...|.++|--+.+.++.+..+++.+++.|+.+.+|-.+.. ..+.++++++++|.+.+ +.+.-+.+++
T Consensus 38 sggGVt~SGGEPllq~~fl~~l~~~~k~~gi~~~leTnG~~----~~~~~~~l~~~~D~~l~DiK~~d~~~~~~~tG 110 (213)
T PRK10076 38 SGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDA----PASKLLPLAKLCDEVLFDLKIMDATQARDVVK 110 (213)
T ss_pred CCCEEEEeCchHHcCHHHHHHHHHHHHHcCCCEEEECCCCC----CHHHHHHHHHhcCEEEEeeccCCHHHHHHHHC
Confidence 34688888866667789999999999999999999988754 23446677777777654 5555556665
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 341 | ||||
| 1bx4_A | 345 | Structure Of Human Adenosine Kinase At 1.50 Angstro | 1e-120 | ||
| 3loo_A | 365 | Crystal Structure Of Anopheles Gambiae Adenosine Ki | 1e-105 | ||
| 2xtb_A | 347 | Crystal Structure Of Trypanosoma Brucei Rhodesiense | 2e-72 | ||
| 3uq6_A | 372 | Adenosine Kinase From Schistosoma Mansoni In Comple | 2e-66 | ||
| 3vaq_A | 372 | Adenosine Kinase From Schistosoma Mansoni In Comple | 2e-66 | ||
| 3vas_A | 370 | Adenosine Kinase From Schistosoma Mansoni In Comple | 2e-66 | ||
| 1lii_A | 363 | Structure Of T. Gondii Adenosine Kinase Bound To Ad | 4e-47 | ||
| 1lio_A | 363 | Structure Of Apo T. Gondii Adenosine Kinase Length | 8e-46 | ||
| 2abs_A | 383 | Crystal Structure Of T. Gondii Adenosine Kinase Com | 2e-45 | ||
| 1dgm_A | 363 | Crystal Structure Of Adenosine Kinase From Toxoplas | 2e-45 | ||
| 4e3a_A | 352 | Crystal Structure Of Probable Sugar Kinase Protein | 2e-13 | ||
| 3ubo_A | 354 | The Crystal Structure Of Adenosine Kinase From Sino | 6e-12 | ||
| 3h49_A | 325 | Crystal Structure Of A Putative Ribokinase (Apo For | 9e-11 | ||
| 1rk2_A | 309 | E. Coli Ribokinase Complexed With Ribose And Adp, S | 4e-09 | ||
| 2c49_A | 302 | Crystal Structure Of Methanocaldococcus Jannaschii | 2e-08 | ||
| 3lhx_A | 319 | Crystal Structure Of A Ketodeoxygluconokinase (Kdgk | 5e-08 | ||
| 2fv7_A | 331 | Crystal Structure Of Human Ribokinase Length = 331 | 8e-08 | ||
| 1tz6_A | 339 | Crystal Structure Of Aminoimidazole Riboside Kinase | 7e-07 | ||
| 1tyy_A | 339 | Crystal Structure Of Aminoimidazole Riboside Kinase | 2e-06 | ||
| 1v19_A | 309 | 2-Keto-3-Deoxygluconate Kinase From Thermus Thermop | 2e-06 | ||
| 2nwh_A | 317 | Carbohydrate Kinase From Agrobacterium Tumefaciens | 3e-06 | ||
| 1vm7_A | 311 | Crystal Structure Of Ribokinase (Tm0960) From Therm | 4e-06 | ||
| 3q1y_A | 320 | Allosteric Regulation By Lysine Residue: A Novel An | 5e-05 | ||
| 3hic_A | 320 | The Crystal Structure Of Phosphofructokinase(Lin219 | 7e-05 | ||
| 4du5_A | 336 | Crystal Structure Of Pfkb Protein From Polaromonas | 3e-04 |
| >pdb|1BX4|A Chain A, Structure Of Human Adenosine Kinase At 1.50 Angstroms Length = 345 | Back alignment and structure |
|
| >pdb|3LOO|A Chain A, Crystal Structure Of Anopheles Gambiae Adenosine Kinase In Complex With P1,P4-Di(Adenosine-5) Tetraphosphate Length = 365 | Back alignment and structure |
|
| >pdb|2XTB|A Chain A, Crystal Structure Of Trypanosoma Brucei Rhodesiense Adenosine Kinase Complexed With Activator Length = 347 | Back alignment and structure |
|
| >pdb|3UQ6|A Chain A, Adenosine Kinase From Schistosoma Mansoni In Complex With Adenosine And Amp Length = 372 | Back alignment and structure |
|
| >pdb|3VAQ|A Chain A, Adenosine Kinase From Schistosoma Mansoni In Complex With Adenosine Length = 372 | Back alignment and structure |
|
| >pdb|3VAS|A Chain A, Adenosine Kinase From Schistosoma Mansoni In Complex With Adenosine In Occluded Loop Conformation Length = 370 | Back alignment and structure |
|
| >pdb|1LII|A Chain A, Structure Of T. Gondii Adenosine Kinase Bound To Adenosine 2 And Amp-Pcp Length = 363 | Back alignment and structure |
|
| >pdb|1LIO|A Chain A, Structure Of Apo T. Gondii Adenosine Kinase Length = 363 | Back alignment and structure |
|
| >pdb|2ABS|A Chain A, Crystal Structure Of T. Gondii Adenosine Kinase Complexed With Amp-Pcp Length = 383 | Back alignment and structure |
|
| >pdb|1DGM|A Chain A, Crystal Structure Of Adenosine Kinase From Toxoplasma Gondii Length = 363 | Back alignment and structure |
|
| >pdb|4E3A|A Chain A, Crystal Structure Of Probable Sugar Kinase Protein From Rhizobium Etli Cfn 42 Length = 352 | Back alignment and structure |
|
| >pdb|3UBO|A Chain A, The Crystal Structure Of Adenosine Kinase From Sinorhizobium Meliloti Length = 354 | Back alignment and structure |
|
| >pdb|3H49|A Chain A, Crystal Structure Of A Putative Ribokinase (Apo Form) From E.Coli At 1.8a Resolution Length = 325 | Back alignment and structure |
|
| >pdb|1RK2|A Chain A, E. Coli Ribokinase Complexed With Ribose And Adp, Solved In Space Group P212121 Length = 309 | Back alignment and structure |
|
| >pdb|2C49|A Chain A, Crystal Structure Of Methanocaldococcus Jannaschii Nucleoside Kinase - An Archaeal Member Of The Ribokinase Family Length = 302 | Back alignment and structure |
|
| >pdb|3LHX|A Chain A, Crystal Structure Of A Ketodeoxygluconokinase (Kdgk) From Shigella Flexneri Length = 319 | Back alignment and structure |
|
| >pdb|2FV7|A Chain A, Crystal Structure Of Human Ribokinase Length = 331 | Back alignment and structure |
|
| >pdb|1TZ6|A Chain A, Crystal Structure Of Aminoimidazole Riboside Kinase From Salmonella Enterica Complexed With Aminoimidazole Riboside And Atp Analog Length = 339 | Back alignment and structure |
|
| >pdb|1TYY|A Chain A, Crystal Structure Of Aminoimidazole Riboside Kinase From Salmonella Enterica Length = 339 | Back alignment and structure |
|
| >pdb|1V19|A Chain A, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus Length = 309 | Back alignment and structure |
|
| >pdb|2NWH|A Chain A, Carbohydrate Kinase From Agrobacterium Tumefaciens Length = 317 | Back alignment and structure |
|
| >pdb|1VM7|A Chain A, Crystal Structure Of Ribokinase (Tm0960) From Thermotoga Maritima At 2.15 A Resolution Length = 311 | Back alignment and structure |
|
| >pdb|3Q1Y|A Chain A, Allosteric Regulation By Lysine Residue: A Novel Anion-Hole Formation In The Ribokinase Family Length = 320 | Back alignment and structure |
|
| >pdb|3HIC|A Chain A, The Crystal Structure Of Phosphofructokinase(Lin2199)from Listeria Innocua Length = 320 | Back alignment and structure |
|
| >pdb|4DU5|A Chain A, Crystal Structure Of Pfkb Protein From Polaromonas Sp. Js666 Length = 336 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 341 | |||
| 3loo_A | 365 | Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad | 1e-171 | |
| 3otx_A | 347 | Adenosine kinase, putative; AP5A, transferase-tran | 1e-170 | |
| 1bx4_A | 345 | Protein (adenosine kinase); human adenosine kinase | 1e-169 | |
| 2abs_A | 383 | Adenosine kinase, AK; ribokinase fold, alpha/beta, | 1e-148 | |
| 4e3a_A | 352 | Sugar kinase protein; structural genomics, protein | 7e-56 | |
| 2hlz_A | 312 | Ketohexokinase; non-protein kinase, creatine kinas | 2e-46 | |
| 2c4e_A | 302 | Sugar kinase MJ0406; transferase, nucleoside kinas | 8e-38 | |
| 3h49_A | 325 | Ribokinase; transferase,PFKB family,sugar kinase Y | 7e-37 | |
| 2pkf_A | 334 | Adenosine kinase; transferase, S genomics, TB stru | 1e-36 | |
| 3b1n_A | 326 | Ribokinase, putative; rossmann fold, ATP binding, | 6e-35 | |
| 3kzh_A | 328 | Probable sugar kinase; NYSGXRC, PSI-II, protein st | 7e-35 | |
| 4e69_A | 328 | 2-dehydro-3-deoxygluconokinase; putative sugar kin | 1e-33 | |
| 2nwh_A | 317 | AGR_C_3442P, carbohydrate kinase; structural genom | 6e-33 | |
| 3bf5_A | 306 | Ribokinase related protein; 10640157, putative rib | 1e-32 | |
| 3lhx_A | 319 | Ketodeoxygluconokinase; structural genomics, PSI-2 | 1e-32 | |
| 3hj6_A | 327 | Fructokinase, FRK; fructose, transferase, carbohyd | 4e-32 | |
| 4du5_A | 336 | PFKB; structural genomics, PSI-biology, NEW YORK s | 9e-32 | |
| 3iq0_A | 330 | Putative ribokinase II; transferase,kinase,SAD,rib | 2e-30 | |
| 1rkd_A | 309 | Ribokinase; carbohydrate kinase, ribose, nucleotid | 2e-30 | |
| 2qcv_A | 332 | Putative 5-dehydro-2-deoxygluconokinase; structura | 6e-30 | |
| 3pl2_A | 319 | Sugar kinase, ribokinase family; PFKB PFAM motif, | 7e-30 | |
| 1vk4_A | 298 | PFKB carbohydrate kinase TM0415; structural genomi | 2e-29 | |
| 2qhp_A | 296 | Fructokinase; NP_810670.1, PFKB family carbohydrat | 8e-29 | |
| 2dcn_A | 311 | Hypothetical fructokinase; 2-keto-3-deoxygluconate | 1e-28 | |
| 3ry7_A | 304 | Ribokinase; transferase; 2.15A {Staphylococcus aur | 1e-28 | |
| 1vm7_A | 311 | Ribokinase; TM0960, structural genomics, JCSG, pro | 3e-28 | |
| 2fv7_A | 331 | Ribokinase; structural genomics, structural genomi | 3e-28 | |
| 1tyy_A | 339 | Putative sugar kinase; ribokinase fold, alpha/beta | 7e-28 | |
| 2v78_A | 313 | Fructokinase; transferase, PFKB family carbohydrat | 8e-28 | |
| 1v1a_A | 309 | 2-keto-3-deoxygluconate kinase; ATP, structural ge | 2e-27 | |
| 2rbc_A | 343 | Sugar kinase, AGR_C_4560P; ribokinase family, ATP- | 2e-26 | |
| 3go6_A | 310 | Ribokinase RBSK; phosphofructokinase, carbohydrate | 4e-25 | |
| 3ikh_A | 299 | Carbohydrate kinase; transferase,kinase,SAD,ribose | 5e-25 | |
| 3ewm_A | 313 | Uncharacterized sugar kinase PH1459; carbohydrate | 6e-25 | |
| 3ljs_A | 338 | Fructokinase; fructokianse, PSI2, NYSGXRC, structu | 2e-24 | |
| 3kd6_A | 313 | Carbohydrate kinase, PFKB family; nucleoside kinas | 6e-24 | |
| 3ktn_A | 346 | Carbohydrate kinase, PFKB family; PFKB family,ribo | 2e-18 | |
| 2afb_A | 351 | 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro- | 3e-17 | |
| 2f02_A | 323 | Tagatose-6-phosphate kinase; LACC, structural geno | 1e-07 | |
| 3cqd_A | 309 | 6-phosphofructokinase isozyme 2; phosphofructokina | 1e-07 | |
| 2abq_A | 306 | Fructose 1-phosphate kinase; dimer, structural gen | 2e-07 | |
| 2jg5_A | 306 | Fructose 1-phosphate kinase; 1-phosphofructokinase | 4e-07 | |
| 2jg1_A | 330 | Tagatose-6-phosphate kinase; phosphoryl transfer, | 8e-07 | |
| 3ie7_A | 320 | LIN2199 protein; phosphofructokinases, transferase | 1e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-06 | |
| 2ajr_A | 331 | Sugar kinase, PFKB family; TM0828, possible 1-phos | 2e-05 | |
| 3pzs_A | 289 | PM kinase, pyridoxamine kinase; structural genomic | 2e-04 |
| >3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae} Length = 365 | Back alignment and structure |
|---|
Score = 479 bits (1235), Expect = e-171
Identities = 172/340 (50%), Positives = 250/340 (73%), Gaps = 2/340 (0%)
Query: 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGG 62
++G+L+G+GNPLLDIS+VV+ D LNKYD++ NNAILAEEKH+P+Y E+ KY EYIAGG
Sbjct: 22 RDGMLVGLGNPLLDISAVVEKDLLNKYDMQPNNAILAEEKHMPMYQELIEKYQAEYIAGG 81
Query: 63 ATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAV 122
+ QNS+RVAQW+LQ P + GC+G+D++ +++ + GVNV Y ++ TGTCAV
Sbjct: 82 SVQNSLRVAQWILQRPRTAIFFGCVGQDEYARILEERATSNGVNVQYQRSATSPTGTCAV 141
Query: 123 CVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHA 182
V G +RSL ANL+AAN + EHL+ N A ++ A++FY++GFF TVS +S VA+ A
Sbjct: 142 LVTGTQRSLCANLAAANDFTPEHLRSDGNRAYLQGAQFFYVSGFFFTVSFESALSVAKEA 201
Query: 183 AANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL 242
AA ++FMMNLSAPF+ +F+K+ LE++ PY+D +FGNETEA +K + T+D+ EI
Sbjct: 202 AATGRMFMMNLSAPFVPQFYKNNLEEIFPYVDVLFGNETEAIALAKEFNYGTEDLREIGK 261
Query: 243 KLSQWPKASEIRKRTAVITQGADPVVVAQDG--KLKKFPVIVLPKDKLVDTNGAGDAFVG 300
+++ PK + RKR +ITQG+DPV++ + G +++FPV L +++VDTNGAGDAFVG
Sbjct: 262 RIAALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFVG 321
Query: 301 GFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEF 340
GFL+QL+Q + ++ C++ G + + IIQRSGCT+ +P F
Sbjct: 322 GFLAQLLQSRTVDVCIKCGIWAAREIIQRSGCTFEGEPSF 361
|
| >3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A* Length = 347 | Back alignment and structure |
|---|
Score = 476 bits (1228), Expect = e-170
Identities = 135/344 (39%), Positives = 201/344 (58%), Gaps = 3/344 (0%)
Query: 1 MAQEGI-LLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYI 59
MA + + NPLLD+S+ V D+FL KY ++ AIL E+ ++D++ NV Y+
Sbjct: 3 MASAPLRVYVQCNPLLDVSAHVSDEFLVKYGLERGTAILLSERQKGIFDDIEKMPNVRYV 62
Query: 60 AGGATQNSIRVAQWML--QIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESAST 117
GG+ N RVAQWM +Y+GCI D++G+ +K+ ++ G+ + A +
Sbjct: 63 PGGSGLNVARVAQWMQQAYKGKFVTYVGCIADDRYGKVLKEAAEHEGIVMAVEHTTKAGS 122
Query: 118 GTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQL 177
G CAVC+ G ER+LVA+L AAN SEH++ P +++++ FY +GF LTV + +
Sbjct: 123 GACAVCITGKERTLVADLGAANHLSSEHMRSPAVVRAMDESRIFYFSGFTLTVDVNHVLQ 182
Query: 178 VAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDV 237
A + +FM+NLSAPFI +FF L +VLPY D I N EA+ F+ + W+TD V
Sbjct: 183 ACRKAREVDGLFMINLSAPFIMQFFSAQLGEVLPYTDIIVANRHEAKEFANMMKWDTDCV 242
Query: 238 EEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDA 297
EEIA + + + R V T+ + V+A ++ PV L +DK++D NGAGDA
Sbjct: 243 EEIARRAVSEVPYTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDA 302
Query: 298 FVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
F+GGFLS K + C G YT+ +IQR GC++PEKP F+
Sbjct: 303 FMGGFLSAYAVGKDLRRCCETGHYTAQEVIQRDGCSFPEKPSFS 346
|
| >1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A* Length = 345 | Back alignment and structure |
|---|
Score = 472 bits (1218), Expect = e-169
Identities = 197/342 (57%), Positives = 261/342 (76%), Gaps = 2/342 (0%)
Query: 2 AQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAG 61
+E IL GMGNPLLDIS+VVD DFL+KY +K N+ ILAE+KH L+DE+ K+ VEY AG
Sbjct: 4 VRENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAG 63
Query: 62 GATQNSIRVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTC 120
G+TQNSI+VAQWM+Q P A ++ GCIG DKFGE +K+ + A V+ HYYE TGTC
Sbjct: 64 GSTQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTC 123
Query: 121 AVCVVGGERSLVANLSAANCYKSE-HLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVA 179
A C+ G RSL+ANL+AANCYK E HL +NW LVEKA+ YIAGFFLTVSP+S+ VA
Sbjct: 124 AACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLKVA 183
Query: 180 EHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEE 239
HA+ NN++F +NLSAPFI +F+K++L KV+PY+D +FGNETEA TF++ QG+ET D++E
Sbjct: 184 HHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKE 243
Query: 240 IALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFV 299
IA K PK + R+R + TQG D ++A + ++ F V+ + +++DTNGAGDAFV
Sbjct: 244 IAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFV 303
Query: 300 GGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
GGFLSQLV +KP+ EC+RAG Y + +II+R+GCT+PEKP+F+
Sbjct: 304 GGFLSQLVSDKPLTECIRAGHYAASIIIRRTGCTFPEKPDFH 345
|
| >2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A* Length = 383 | Back alignment and structure |
|---|
Score = 422 bits (1086), Expect = e-148
Identities = 104/350 (29%), Positives = 173/350 (49%), Gaps = 24/350 (6%)
Query: 7 LLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQN 66
+ +GNP+LD+ + V FL+++ +K +A LA + + +Y + ++N + GG+ N
Sbjct: 35 VFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTL-DQFNPTSLPGGSALN 93
Query: 67 SIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVG 126
S+RV Q +L+ PG+ Y+G IG D G+ +K+ G+ + STG CAV +
Sbjct: 94 SVRVVQKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINE 153
Query: 127 GERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAA-AN 185
ER+L +L A ++ A FY + LT +P + VA +A
Sbjct: 154 KERTLCTHLGACGSFRLPED----WTTFASGALIFYATAYTLTATPKNALEVAGYAHGIP 209
Query: 186 NKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL--- 242
N +F +NLSAPF E +KDA++ +L + + +FGNE E +KV + ++
Sbjct: 210 NAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKTALSTANK 269
Query: 243 ----------KLSQWPKASEIRKRTAVITQGADPVVVAQDGK-----LKKFPVIVLPKDK 287
+ + V+T+G +PV+ A+ + + V V+ +K
Sbjct: 270 EHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEK 329
Query: 288 LVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEK 337
+VDTNGAGDAFVGGFL L Q K +++C+ G + +IQ G +
Sbjct: 330 IVDTNGAGDAFVGGFLYALSQGKTVKQCIMCGNACAQDVIQHVGFSLSFT 379
|
| >4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A* Length = 352 | Back alignment and structure |
|---|
Score = 184 bits (470), Expect = 7e-56
Identities = 80/332 (24%), Positives = 135/332 (40%), Gaps = 31/332 (9%)
Query: 7 LLGMGNPLLDISSVVDDDFLNKYDIKLNNAILA-EEKHLPLYDEMASKYNVEYIAGGATQ 65
+L +GN ++DI S +D FL I L E+ LY M +GG+
Sbjct: 28 VLTVGNAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMGPA---LEASGGSAG 84
Query: 66 NSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCV 124
N+ + G +Y G + D+ G+ + + GV+ + T + V
Sbjct: 85 NTAAGVA---NLGGKAAYFGNVAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFV 141
Query: 125 V-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAG--FFLTVSPDSIQLVAEH 181
GERS+ L A E + +V AK Y G + + ++I A
Sbjct: 142 TEDGERSMNTYLGACVELGPEDV----EADVVADAKVTYFEGYLWDPPRAKEAILDCARI 197
Query: 182 AAANNKVFMMNLSAPFICEFFKDALEKVLP--YMDYIFGNETEARTFSKVQGWETDDVEE 239
A + + M LS F + ++ ++ +D +F N EA + +TDD EE
Sbjct: 198 AHQHGREMSMTLSDSFCVDRYRGEFLDLMRSGKVDIVFANRQEALSLY-----QTDDFEE 252
Query: 240 IALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFV 299
+++ K A +T + V+ + + I ++VDT GAGD F
Sbjct: 253 ALNRIAADCK-------IAAVTMSENGAVILKGRERYYVNAI--RIREVVDTTGAGDLFA 303
Query: 300 GGFLSQLVQEKPIEECVRAGCYTSHVIIQRSG 331
GFL Q + +E+C + GC + ++IQ+ G
Sbjct: 304 SGFLYGYTQGRSLEDCGKLGCLAAGIVIQQIG 335
|
| >2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A Length = 312 | Back alignment and structure |
|---|
Score = 158 bits (403), Expect = 2e-46
Identities = 56/329 (17%), Positives = 111/329 (33%), Gaps = 45/329 (13%)
Query: 7 LLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQN 66
+L +G +LD+ S+VD P D + + GG N
Sbjct: 20 ILCVGLVVLDVISLVD--------------------KYPKEDSEIRCLSQRWQRGGNASN 59
Query: 67 SIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVV 125
S + + +++G + + + + + V++ Y + S V +
Sbjct: 60 SCTILS---LLGAPCAFMGSMAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIIN 116
Query: 126 --GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAA 183
G R+++ + + +K + + K+ +I G + +Q + H
Sbjct: 117 EASGSRTILYYDRSLPDVSATDFEK----VDLTQFKWIHIEGRNASEQVKMLQRIDAHNT 172
Query: 184 ANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALK 243
+ + E ++ L ++ Y D +F ++ A+ EE
Sbjct: 173 R--QPPEQKIRVSVEVEKPREELFQLFGYGDVVFVSKDVAKHLG------FQSAEEALRG 224
Query: 244 LSQWPKASEIRKRTAVITQGADPVVVA-QDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGF 302
L + + V + DGKL P ++VDT GAGD F
Sbjct: 225 LYGRVR----KGAVLVCAWAEEGADALGPDGKLLHSDAF--PPPRVVDTLGAGDTFNASV 278
Query: 303 LSQLVQEKPIEECVRAGCYTSHVIIQRSG 331
+ L Q + ++E +R GC + G
Sbjct: 279 IFSLSQGRSVQEALRFGCQVAGKKCGLQG 307
|
| >2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A Length = 302 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 8e-38
Identities = 48/258 (18%), Positives = 97/258 (37%), Gaps = 35/258 (13%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVV--GGERSLVANL 135
+ + C+G D ++ K +N+ Y E T A +
Sbjct: 57 VNSELLSCVGYDFKNSGYERYLKNLDINISKLYYSEEEETPK-AWIFTDKDNNQITFFLW 115
Query: 136 SAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLS- 194
AA YK + + + ++ + + A +++
Sbjct: 116 GAAKHYKELNPPN-------FNTE-------IVHIATGDPEFNLKCAKKAYGNNLVSFDP 161
Query: 195 APFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIR 254
+ ++ K+ L +++ + +++F N+ E S + +E DD E R
Sbjct: 162 GQDLPQYSKEMLLEIIEHTNFLFMNKHEFERASNLLNFEIDDYLE--------------R 207
Query: 255 KRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEE 314
++T+G+ V+ K + P I K++D GAGD++ GFLS V+ +E+
Sbjct: 208 VDALIVTKGSKGSVIYTKDKKIEIPCI--KAGKVIDPTGAGDSYRAGFLSAYVKGYDLEK 265
Query: 315 CVRAGCYTSHVIIQRSGC 332
C G T+ +++ GC
Sbjct: 266 CGLIGAATASFVVEAKGC 283
|
| >3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* Length = 325 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 7e-37
Identities = 55/258 (21%), Positives = 103/258 (39%), Gaps = 27/258 (10%)
Query: 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVV-GGERS-LVANLSA 137
T+ + IGKD G+ + + + +++ +D S T V GER+ + +
Sbjct: 60 TALMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGS 119
Query: 138 ANCYKSEHLKKPENWALVEKAKYFYIAGFFLT--VSPDSIQLVAEHAAANN-KVFMMNLS 194
+ + ++A +AK +A F + + ++ + A A + +
Sbjct: 120 LWKLNIDDV----DFARFSQAKLLSLASIFNSPLLDGKALTEIFTQAKARQMIICADMIK 175
Query: 195 -APFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEI 253
D + + L Y+DY+F N EA+ + + ++EIA
Sbjct: 176 PRL---NETLDDICEALSYVDYLFPNFAEAKLLT-----GKETLDEIADCFL------AC 221
Query: 254 RKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIE 313
+T VI G D + + K P + +DT GAGD F GF++ L++ K +
Sbjct: 222 GVKTVVIKTGKDGCFIKRGDMTMKVPAV--AGITAIDTIGAGDNFASGFIAALLEGKNLR 279
Query: 314 ECVRAGCYTSHVIIQRSG 331
EC R T+ + + G
Sbjct: 280 ECARFANATAAISVLSVG 297
|
| >2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* Length = 334 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 1e-36
Identities = 48/267 (17%), Positives = 89/267 (33%), Gaps = 30/267 (11%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCV-VGGERSLVANLS 136
G + +G G D + K GVN + E+A T V +
Sbjct: 72 GEVALVGAAGADFAD--YRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYPG 129
Query: 137 AANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAP 196
A + ++ L + + + K + I P+++ L E F + +
Sbjct: 130 AMSEARNIKL--ADVVSAIGKPELVIIG----ANDPEAMFLHTEECRKLGLAFAADP-SQ 182
Query: 197 FICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKR 256
+ + + +++ Y+F N+ E GW DV +
Sbjct: 183 QLARLSGEEIRRLVNGAAYLFTNDYEWDLLLSKTGWSEADVMA--------------QID 228
Query: 257 TAVITQGADPVVVAQ-DGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEEC 315
V T G V + + DG V+ P+ D G GDAF GFL+ +E
Sbjct: 229 LRVTTLGPKGVDLVEPDGTTIHVGVV--PETSQTDPTGVGDAFRAGFLTGRSAGLGLERS 286
Query: 316 VRAGCYTSHVIIQRSGCT--YPEKPEF 340
+ G + ++++ +G +
Sbjct: 287 AQLGSLVAVLVLESTGTQEWQWDYEAA 313
|
| >3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* Length = 326 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 6e-35
Identities = 42/267 (15%), Positives = 79/267 (29%), Gaps = 34/267 (12%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVV--GGERSLVANL 135
G +G +G + G++ Y + A+ + +
Sbjct: 62 GDARMMGTLGAV-DAQPYLDRMDALGLSREYVRVLPDTYSAQ-AMITTDLDNNQITAFHP 119
Query: 136 SAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSA 195
A H + ++ L + E A F+ +
Sbjct: 120 GAMMQSHVNHAGEAKDIKLA----------IVGPDGFQGMVQHTEELAQAGVPFIFDP-G 168
Query: 196 PFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRK 255
+ F L + + YI N+ EA+ GW +EIA ++
Sbjct: 169 QGLPLFDGATLRRSIELATYIAVNDYEAKLVCDKTGW---SEDEIASRV----------- 214
Query: 256 RTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEEC 315
+ +IT+G + ++ P + ++++D G GDAF GG L +
Sbjct: 215 QALIITRGEHGATIRHRDGTEQIPAV--RAERVIDPTGCGDAFRGGLLYGIEHGFDWATA 272
Query: 316 VRAGCYTSHVIIQRSGC--TYPEKPEF 340
R + I G P + E
Sbjct: 273 GRLASLMGALKIAHQGPQTYAPTRAEI 299
|
| >3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} Length = 328 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 7e-35
Identities = 46/263 (17%), Positives = 95/263 (36%), Gaps = 36/263 (13%)
Query: 79 GA-TSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVV---GGERSLVA 133
G T+++ +G D+ G+ + ++SK G ++ E ST T + ++ G S +A
Sbjct: 56 GVNTNFMSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPT-YLAILDENGEMVSAIA 114
Query: 134 NLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT---VSPDSIQLVAEHAAANNKVFM 190
++ + ++ + + E A+Y + L+ N +
Sbjct: 115 DMKSIGAMNTDFIDS--KREIFENAEYT------VLDSDNPEIMEYLLKNFKDKTNFILD 166
Query: 191 MNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKA 250
SA ++ ++ I N EA + +TDD+ + +
Sbjct: 167 PV-SAEKA-----SWVKHLIKDFHTIKPNRHEAEILAGFPITDTDDLIKASNYF------ 214
Query: 251 SEIRK--RTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQ 308
+ + I+ AD + K + + + GAGD+FV G +
Sbjct: 215 --LGLGIKKVFISLDADGIFYNDGVSCGKIKA---TEVDVKNVTGAGDSFVAGLGYGYMN 269
Query: 309 EKPIEECVRAGCYTSHVIIQRSG 331
+ PIE+ V+ S++ I
Sbjct: 270 KMPIEDIVKFAMTMSNITISHEE 292
|
| >4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* Length = 328 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 1e-33
Identities = 57/284 (20%), Positives = 105/284 (36%), Gaps = 30/284 (10%)
Query: 60 AGGATQN-SIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESAST 117
G T N + +A+ L+ SY IG D ++M+ AG++ +
Sbjct: 49 FAGDTFNTAWYLAR--LRPESRISYFSAIGDDALSQQMRAAMSAAGIDGGGLRVIPGRTV 106
Query: 118 GTCAVCVVGGERSLV--ANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDS- 174
G + + GERS SAA + A + +A Y +G L +
Sbjct: 107 GLYLITLEQGERSFAYWRGQSAARELAGDA---DALAAAMARADVVYFSGITLAILDQCG 163
Query: 175 ----IQLVAEHAAANNKV-FMMNLSAPFI--CEFFKDALEKVLPYMDYIFGNETEARTFS 227
++ +A+ A + F NL + + + D + + +
Sbjct: 164 RATLLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEAAW- 222
Query: 228 KVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDK 287
+ + A + ++ R+ V+ G V QDG+ + PV P +
Sbjct: 223 ----FGDAGPDATADRYARAGV------RSVVVKNGPHAVHFLQDGRRGRVPVP--PVAQ 270
Query: 288 LVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSG 331
+VDT AGD+F G L ++ +P+E + A + ++Q G
Sbjct: 271 VVDTTAAGDSFNAGLLDSVLAGQPLETAIAAAAALAGQVVQGKG 314
|
| >2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} Length = 317 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 6e-33
Identities = 55/263 (20%), Positives = 98/263 (37%), Gaps = 35/263 (13%)
Query: 79 GA-TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERS-LVANL 135
G I G D GE + + ++ AGV + T + + G +A++
Sbjct: 53 GFEVRIIAPRGGDVTGEVVAEAARQAGVEDTPFTFLDRRTPSYTAILERDGNLVIALADM 112
Query: 136 SAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT---VSPDSIQLVAEHA-AANNKVFMM 191
+ LK + + F L + D++ + A A + +
Sbjct: 113 DLYKLFTPRRLKVRAVREAIIASD------FLLCDANLPEDTLTALGLIARACEKPLAAI 166
Query: 192 NLS-APFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKA 250
+S A + L+ L +D +F NE EAR + G ++V + L
Sbjct: 167 AISPAKAV------KLKAALGDIDILFMNEAEARALT---GETAENVRDWPNIL------ 211
Query: 251 SEIRK--RTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQ 308
+ V+T+GA VV + K + ++ D GAGDA G+L+ + +
Sbjct: 212 --RKAGLSGGVVTRGASEVVAFNGTE--KAILHPPLIREVKDVTGAGDAMASGYLAAIAE 267
Query: 309 EKPIEECVRAGCYTSHVIIQRSG 331
K I E +R G + + +Q S
Sbjct: 268 GKTIREALRQGAAAAAITVQSSF 290
|
| >3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728} Length = 306 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 1e-32
Identities = 48/266 (18%), Positives = 87/266 (32%), Gaps = 47/266 (17%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVVGGERSLVANLSA 137
+G E + G+N + + E S C + G ++ + A
Sbjct: 71 IPFDLYSAVGMKTHRE-YLAMIESMGINTGHVEKFEDESGPICYIATDGKKQVSFMHQGA 129
Query: 138 ANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPF 197
+ + L ++ +Y + + P+ + A + + + +
Sbjct: 130 MAAWAPQ---------LADEYEYVHFS-----TGPN----YLDMAKSIRSKIIFDP-SQE 170
Query: 198 ICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRT 257
I ++ KD L+K N+ E R F ++ G + V T
Sbjct: 171 IHKYSKDELKKFHEISYMSIFNDHEYRVFREMTGLSSPKV-------------------T 211
Query: 258 AVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVR 317
++T G + DGK FP I DT GAGD+F G L + IE+ +
Sbjct: 212 TIVTNGERGSSLFMDGKKYDFPAIPSS----GDTVGAGDSFRAGLYLALYNRRSIEKGMI 267
Query: 318 AGCYTSHVIIQRSGC--TYPEKPEFN 341
G +H +I G +
Sbjct: 268 YGTIIAHHVIDD-GIENFSLNMEDLE 292
|
| >3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri} Length = 319 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 1e-32
Identities = 65/290 (22%), Positives = 111/290 (38%), Gaps = 34/290 (11%)
Query: 60 AGGATQN-SIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESAST 117
GG T N S+ +A+ + Y+ +G D F ++M V+ E+
Sbjct: 28 FGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFSQQMLDAWHGENVDTSLTQRMENRLP 87
Query: 118 GTCAV-CVVGGERSLV--ANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDS 174
G + GER+ N +AA + + + Y Y++G L + +
Sbjct: 88 GLYYIETDSTGERTFYYWRNEAAAKFWLASEQS-AAICEELANFDYLYLSGISLAILSPT 146
Query: 175 -----IQLVAEHAAANNKV-FMMNL------SAPFICEFFKDALEKVLPYMDYIFGNETE 222
+ L+ E A KV F N S E + +++L D F +
Sbjct: 147 SREKLLSLLRECRAKGGKVIFDNNYRPRLWASK----EETQQVYQQMLECTDIAFLTLDD 202
Query: 223 ARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVA-QDGKLKKFPVI 281
W VE++ + E+ V+ +GAD +V+ L P +
Sbjct: 203 EDAL-----WGQQPVEDVIARTHNAG-VKEV-----VVKRGADSCLVSIAGEALVDVPAV 251
Query: 282 VLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSG 331
LPK+K++DT AGD+F G+L+ + E + G T+ +IQ G
Sbjct: 252 KLPKEKVIDTTAAGDSFSAGYLAVRLTGGSAENAAKRGHLTASTVIQYRG 301
|
| >3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} Length = 327 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 4e-32
Identities = 46/270 (17%), Positives = 98/270 (36%), Gaps = 27/270 (10%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVVGGERSLVANLSA 137
+ I +G D FG + K + +D+ T V + A
Sbjct: 69 KKVALISRLGADAFGNYLLDVLKGEQIITDGIQQDKERRTTIVYVSKSTRTPDWLPYREA 128
Query: 138 ANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP--DSIQLVAEHAAANNK--VFMMNL 193
+ + + + L++++K F+++ F L+ P D+ +A K F
Sbjct: 129 DMYLQEDDI----IFELIKRSKVFHLSTFILSRKPARDTAIKAFNYAREQGKIVCFDPCY 184
Query: 194 SAPFI--CEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKAS 251
+ +E+++ D++ + +AR + D E + +
Sbjct: 185 RKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHL-----FGPDSPENYVKRYLELGV-- 237
Query: 252 EIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKP 311
+ ++T G + V+ + ++ + P + VD GAGDAF GF+ L+
Sbjct: 238 ----KAVILTLGEEGVIASDGEEIIRIPAF---SEDAVDVTGAGDAFWSGFICGLLDGYT 290
Query: 312 IEECVRAGCYTSHVIIQRSGCT--YPEKPE 339
++ ++ G + I+ G P K +
Sbjct: 291 VKRSIKLGNGVAAFKIRGVGALSPVPSKED 320
|
| >4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} Length = 336 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 9e-32
Identities = 52/276 (18%), Positives = 94/276 (34%), Gaps = 33/276 (11%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVV--GGERSLV--- 132
+ +G D G + G++ + D + TG V G + +
Sbjct: 73 LKVGWASRLGTDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHR 132
Query: 133 ANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLV---AEHAAANNK-- 187
SAA+ + + A + A++ + G F +S ++ + A +
Sbjct: 133 KG-SAASHMGVADI----DEAWLLSARHLHATGVFPAISATTLPAARKTMDLMRAAGRSV 187
Query: 188 VFMMNLSAPF--ICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLS 245
F NL E +DA+ + D++ E R E +A
Sbjct: 188 SFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFL-----TGETTPEGVARFYR 242
Query: 246 QWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQ 305
Q + V+ GA+ + + P ++VDT GAGD F G +S
Sbjct: 243 QLGA------KLVVVKLGAEGAYFDGEAGSGRVAGF--PVAEVVDTVGAGDGFAVGVISA 294
Query: 306 LVQEKPIEECVRAGCYTSHVIIQRSGCT--YPEKPE 339
L+ + E V+ G + +Q G + P + E
Sbjct: 295 LLDGLGVPEAVKRGAWIGARAVQVLGDSEGLPTRAE 330
|
| >3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} PDB: 3k9e_A Length = 330 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 2e-30
Identities = 49/275 (17%), Positives = 87/275 (31%), Gaps = 35/275 (12%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVV-GGERSLV--AN 134
I C+G D FG+ GV++ +TG+ V G+R +
Sbjct: 52 VPCGIISCVGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNIK 111
Query: 135 LSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP--DSIQLVAEHAAANNK--VFM 190
+A ++H+ + +++ +F+I G L D+++ AN F
Sbjct: 112 NAACGKLSAQHV----DENILKDCTHFHIMGSSLFSFHMVDAVKKAVTIVKANGGVISFD 167
Query: 191 MNLSAPFI-CEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPK 249
N+ + +DAL VL D +E E S E
Sbjct: 168 PNIRKEMLDIPEMRDALHFVLELTDIYMPSEGEVLLLS-----PHSTPERAIAGFL---- 218
Query: 250 ASEIRKRTAVITQGADPVVVAQDGKLKK---FPVIVLPKDKLVDTNGAGDAFVGGFLSQL 306
E + ++ +G + +PV VD GAGD F G +++
Sbjct: 219 --EEGVKEVIVKRGNQGASYYSANEQFHVESYPVEE------VDPTGAGDCFGGAWIACR 270
Query: 307 VQEKPIEECVRAGCYTSHVIIQRSGCT--YPEKPE 339
++ + + R G E
Sbjct: 271 QLGFDAHRALQYANACGALAVTRRGPMEGTSRLME 305
|
| >1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* Length = 309 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 2e-30
Identities = 59/261 (22%), Positives = 110/261 (42%), Gaps = 33/261 (12%)
Query: 79 GA-TSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVVG--GERSLVAN 134
GA ++I C G D GE +++ +++ + STG A+ V GE + +
Sbjct: 55 GANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGV-ALIFVNGEGENVIGIH 113
Query: 135 LSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT---VSPDSIQLVAEHAAANNKVFMM 191
A ++ + A L +S+ A+ A N + +
Sbjct: 114 AGANAALSPALVEA--QRERIANASAL------LMQLESPLESVMAAAKIAHQNKTIVAL 165
Query: 192 NLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKL-SQWPKA 250
N AP ++ +++L +D I NETEA + ++ +D + A L + +
Sbjct: 166 NP-APA-----RELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIR- 218
Query: 251 SEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK 310
T +IT G+ V + +G+ ++ P + + VDT AGD F G ++ L++EK
Sbjct: 219 ------TVLITLGSRGVWASVNGEGQRVPG---FRVQAVDTIAAGDTFNGALITALLEEK 269
Query: 311 PIEECVRAGCYTSHVIIQRSG 331
P+ E +R + + + R G
Sbjct: 270 PLPEAIRFAHAAAAIAVTRKG 290
|
| >2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} Length = 332 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 6e-30
Identities = 55/276 (19%), Positives = 98/276 (35%), Gaps = 31/276 (11%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHY--YEDESASTGTCAVC--VVGGERSLV-- 132
+IG I D+ G ++ + GV+ + E TG A E S++
Sbjct: 59 LKAGFIGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGL-AFTEIKSPEECSILMY 117
Query: 133 ANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP--DSIQLVAEHAAANNK--V 188
A E + N A + ++K ++G L+ SP +++ A N+ V
Sbjct: 118 RQDVADLYLSPEEV----NEAYIRRSKLLLVSGTALSKSPSREAVLKAIRLAKRNDVKVV 173
Query: 189 FMMNLSAPF--ICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQ 246
F ++ E V D + G E E D +E L +
Sbjct: 174 FELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENRT--EKGDNDETIRYLFK 231
Query: 247 WPKASEIRKRTAVITQGADPVVVA-QDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQ 305
VI G + + G+ + K K++ T GAGD++ FL
Sbjct: 232 H------SPELIVIKHGVEGSFAYTKAGEAYRGYAY---KTKVLKTFGAGDSYASAFLYA 282
Query: 306 LVQEKPIEECVRAGCYTSHVIIQRSGCT--YPEKPE 339
L+ K IE ++ G ++ +++ + + P E
Sbjct: 283 LISGKGIETALKYGSASASIVVSKHSSSDAMPSVEE 318
|
| >3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} Length = 319 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 7e-30
Identities = 50/274 (18%), Positives = 90/274 (32%), Gaps = 32/274 (11%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVC--VVGGERSLV--A 133
++ + +G D FGE + + GV+ Y D++ T C + L
Sbjct: 56 HNSALLSRVGNDPFGEYLLAELERLGVDNQYVATDQTFKTPV-TFCEIFPPDDFPLYFYR 114
Query: 134 NLSAANCYKSEHLKKPE-NWALVEKAKYFYIAGFFLTVSP-DSIQLVAEHAAANNK--VF 189
A +++ + + V +A + + P AN + +F
Sbjct: 115 EPKAP----DLNIESADVSLDDVREADILWFTLTGFSEEPSRGTHREILTTRANRRHTIF 170
Query: 190 MMNLSAPFI--CEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQW 247
++ F E E L + GN+ E + E L
Sbjct: 171 DLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIAV-----GETEPERAGRALL-- 223
Query: 248 PKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLV 307
E A++ QG V+ + + P +++ GAGDAF G L+
Sbjct: 224 ----ERGVELAIVKQGPKGVMAMTKDETVEVPPF---FVDVINGLGAGDAFGGALCHGLL 276
Query: 308 QEKPIEECVRAGCYTSHVIIQRSGCT--YPEKPE 339
E P+E+ +R ++ R C+ P E
Sbjct: 277 SEWPLEKVLRFANTAGALVASRLECSTAMPTTDE 310
|
| >1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 Length = 298 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 2e-29
Identities = 46/295 (15%), Positives = 89/295 (30%), Gaps = 40/295 (13%)
Query: 45 PLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA-TSYIGCIGKDKFG--EEMKKNSK 101
D E GG + + G T I ++ ++ N
Sbjct: 20 VSKDVNVVDGKREIAYGGGVVMGAITSSLL----GVKTKVITKCTREDVSKFSFLRDN-- 73
Query: 102 LAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYF 161
GV V + + ++ R +SAA+ + L + +
Sbjct: 74 --GVEVVFLKSPRTTSIENRYGSDPDTRESFL-ISAADPFTESDLAF-------IEGEAV 123
Query: 162 YIAGFFLT-VSPDSIQLVAEHA---AANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIF 217
+I + D I ++ +A+ + F+ + + EK L Y+D
Sbjct: 124 HINPLWYGEFPEDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLKYLDLFK 183
Query: 218 GNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKK 277
+ EA T + T+D+ E + + ++ A V+V
Sbjct: 184 VDSREAETLT-----GTNDLRESCRIIRSFGA-------KIILATHASGVIVFDG----N 227
Query: 278 FPVIVLPKDKLVDTNGAGDAFVGGFL-SQLVQEKPIEECVRAGCYTSHVIIQRSG 331
F L G GD FL + ++ IE+ + + V ++ G
Sbjct: 228 FYEASFRSWSLEGRTGRGDTCTAAFLVGFVFKKMSIEKATKFAAAVTSVKMRHPG 282
|
| >2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Length = 296 | Back alignment and structure |
|---|
Score = 111 bits (281), Expect = 8e-29
Identities = 54/281 (19%), Positives = 99/281 (35%), Gaps = 30/281 (10%)
Query: 60 AGGATQNSIRVAQWMLQIPGATSY-IGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTG 118
GGA N A + + G S + +G D+ G+E+ + K + E TG
Sbjct: 23 IGGAPAN---FA-YHVSQFGFDSRVVSAVGNDELGDEIMEVFKEKQLKNQI-ERVDYPTG 77
Query: 119 TCAVCVV-GGERS--LVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP--D 173
T V + G + ++ N ++ LK L +
Sbjct: 78 TVQVTLDDEGVPCYEIKEGVAWDNIPFTDELK-----RLALNTRAVCFGSLAQRNEVSRA 132
Query: 174 SIQLVAEHAAANNKVFMM---NLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQ 230
+I + + + NL F K+ L + + + N+ E T S++
Sbjct: 133 TINRFLDTMPDIDGQLKIFDINLRQDFYT---KEVLRESFKRCNILKINDEELVTISRMF 189
Query: 231 GWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVD 290
G+ D+++ L + ++T G + V G + PK + D
Sbjct: 190 GYPGIDLQDKCWILLAKYNLKML-----ILTCGINGSYVFTPGVVSFQET---PKVPVAD 241
Query: 291 TNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSG 331
T GAGD+F F + ++ K + E + S + +SG
Sbjct: 242 TVGAGDSFTAAFCASILNGKSVPEAHKLAVEVSAYVCTQSG 282
|
| >2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* Length = 311 | Back alignment and structure |
|---|
Score = 111 bits (281), Expect = 1e-28
Identities = 54/276 (19%), Positives = 98/276 (35%), Gaps = 41/276 (14%)
Query: 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAV---CVVGGERSLV---A 133
I +G D+FG + + GV+V + D SA TG + V + +
Sbjct: 50 CGIIAKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRK 109
Query: 134 NLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNK--VFMM 191
SA + E + + V+ A + +G L +S + + V A F
Sbjct: 110 G-SAGSKLSPEDV----DEEYVKSADLVHSSGITLAISSTAKEAV-YKAFEIASNRSFDT 163
Query: 192 NLSAPFI-CEFFKDALEKVLP--YMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWP 248
N+ E K + K+L ++ ++ + +++ D ++ A S +
Sbjct: 164 NIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKII-----LGESDPDKAAKAFSDYA 218
Query: 249 KASEIRKRTAVITQGADPVVVAQDGK---LKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQ 305
+ V+ G +V DGK + V + D GAGDA G FLS
Sbjct: 219 E-------IIVMKLGPKGAIVYYDGKKYYSSGYQV------PVEDVTGAGDALGGTFLSL 265
Query: 306 LVQEKPIEECVRAGCYTSHVIIQRSGCT--YPEKPE 339
+ +E+ + S + + G P +
Sbjct: 266 YYKGFEMEKALDYAIVASTLNVMIRGDQENLPTTKD 301
|
| >3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} Length = 304 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 1e-28
Identities = 58/261 (22%), Positives = 103/261 (39%), Gaps = 32/261 (12%)
Query: 79 GA-TSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVV--GGERSLVAN 134
A T++I IG D + + ++ K+A ++ Y + A TG A V G+ ++
Sbjct: 54 QADTTFITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQ-AFITVNAEGQNTIYVY 112
Query: 135 LSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT---VSPDSIQLVAEHAAANNKVFMM 191
A E + + A + + V +I E A A+ ++
Sbjct: 113 GGANMTMTPEDVIN--AKDAIINADFV------VAQLEVPIPAIISAFEIAKAHGVTTVL 164
Query: 192 NLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKAS 251
N AP K ++L +D I NETEA S ++ +++ A
Sbjct: 165 NP-APA-----KALPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFL------ 212
Query: 252 EIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKP 311
I +T +IT G A + + K +DT AGD F+G F+S+L + +
Sbjct: 213 SIGIKTVLITLGKQGTYFATKNQSQHIEA---YKVNAIDTTAAGDTFIGAFVSRLNKSQD 269
Query: 312 -IEECVRAGCYTSHVIIQRSG 331
+ + + G S + +Q+ G
Sbjct: 270 NLADAIDFGNKASSLTVQKHG 290
|
| >1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1 Length = 311 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 3e-28
Identities = 60/260 (23%), Positives = 97/260 (37%), Gaps = 42/260 (16%)
Query: 80 ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV--GGERSLVANLSA 137
++ CIG D + + + +N + G+ + S TG A V G+ ++ A
Sbjct: 68 GCRFVTCIGNDDYSDLLIENYEKLGITGYI--RVSLPTGR-AFIEVDKTGQNRIIIFPGA 124
Query: 138 ANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQL------VAEHAAANNKVFMM 191
K E + + ++ +Q E A N + +
Sbjct: 125 NAELKKELIDW----NTLSESDIL------------LLQNEIPFETTLECAKRFNGIVIF 168
Query: 192 NLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKAS 251
+ AP + E++ Y+DY+ NE E SK E VE+ A K
Sbjct: 169 DP-APA-----QGINEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKFL------ 216
Query: 252 EIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKP 311
E+ + ++ G V++ + K FP K K VDT AGD F G F L + K
Sbjct: 217 ELGVKNVIVKLGDKGVLLVNKNEKKHFPT---FKVKAVDTTAAGDVFNGAFAVALSEGKN 273
Query: 312 IEECVRAGCYTSHVIIQRSG 331
EE V G + + + R G
Sbjct: 274 PEEAVIFGTAAAAISVTRLG 293
|
| >2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 Length = 331 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 3e-28
Identities = 66/266 (24%), Positives = 110/266 (41%), Gaps = 38/266 (14%)
Query: 79 GA-TSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVV--GGERSLVAN 134
GA TS + +GKD FG + +N K ++ + Y+ + A+TGT A +V G+ +V
Sbjct: 75 GAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGT-ASIIVNNEGQNIIVIV 133
Query: 135 LSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT---VSPDSIQLVAEHAAANNKVFMM 191
A +E L+ ++ +AK + ++P + A + +
Sbjct: 134 AGANLLLNTEDLRA--AANVISRAK------VMVCQLEITPATSLEALTMARRSGVKTLF 185
Query: 192 NLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKAS 251
N AP I + D NE+EA + + D E AL L
Sbjct: 186 NP-APAIADLDPQFYTLS----DVFCCNESEAEILTGLTVGSAADAGEAALVL------- 233
Query: 252 EIRK--RTAVITQGADPVVVAQ--DGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQL- 306
+++ + +IT GA+ VV + + K P K K VDT GAGD+FVG L
Sbjct: 234 -LKRGCQVVIITLGAEGCVVLSQTEPEPKHIPT---EKVKAVDTTGAGDSFVGALAFYLA 289
Query: 307 -VQEKPIEECVRAGCYTSHVIIQRSG 331
+E+ + + + V +Q +G
Sbjct: 290 YYPNLSLEDMLNRSNFIAAVSVQAAG 315
|
| >1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* Length = 339 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 7e-28
Identities = 54/279 (19%), Positives = 98/279 (35%), Gaps = 39/279 (13%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVV--GGERSLV--A 133
G +IGC+G D G +++ + GV+V + D ++ + + GERS
Sbjct: 65 GECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAV-LIVNLTADGERSFTYLV 123
Query: 134 NLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP--DSIQLVAEHAAANNK--VF 189
+ A + L + ++FY + LT P ++ A +F
Sbjct: 124 HPGADTYVSPQDL------PPFRQYEWFYFSSIGLTDRPAREACLEGARRMREAGGYVLF 177
Query: 190 MMNLSAPFI--CEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQW 247
+NL + + + + + + E S ++ L
Sbjct: 178 DVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLS-----GASHWQDARYYLR-- 230
Query: 248 PKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLV 307
++ T +I+ GAD ++ FP P+ +VDT GAGDAFVGG L L
Sbjct: 231 ----DLGCDTTIISLGADGALLITAEGEFHFPA---PRVDVVDTTGAGDAFVGGLLFTLS 283
Query: 308 Q-----EKPIEECVRAGCYTSHVIIQRSGCT--YPEKPE 339
+ + E + + + G P +
Sbjct: 284 RANCWDHALLAEAISNANACGAMAVTAKGAMTALPFPDQ 322
|
| >2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* Length = 313 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 8e-28
Identities = 54/278 (19%), Positives = 100/278 (35%), Gaps = 43/278 (15%)
Query: 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVC----VVGGERSLV--A 133
S I +G D+FG+ + + S+ G++ + D + TG + + LV
Sbjct: 50 CSLIARVGNDEFGKNIIEYSRAQGIDTSHIKVDNESFTGI-YFIQRGYPIPMKSELVYYR 108
Query: 134 NLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLV---AEHAAANNKVFM 190
SA + E + N V ++ + G L +S ++ + V E A +
Sbjct: 109 KGSAGSRLSPEDI----NENYVRNSRLVHSTGITLAISDNAKEAVIKAFELAKSR--SLD 162
Query: 191 MNLSAPF--ICEFFKDALEKVLPYMD--YIFGNETEARTFSKVQGWETDDVEEIALKLSQ 246
N+ E K+ + +L D + + + + + D +E K
Sbjct: 163 TNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKIL-----LDVTDPDEAYRKYK- 216
Query: 247 WPKASEIRKRTAVITQGADPVVVAQDGK---LKKFPVIVLPKDKLVDTNGAGDAFVGGFL 303
E+ + + G+ + +D + V + D GAGDA G F+
Sbjct: 217 -----ELGVKVLLYKLGSKGAIAYKDNVKAFKDAYKV------PVEDPTGAGDAMAGTFV 265
Query: 304 SQLVQEKPIEECVRAGCYTSHVIIQRSGCT--YPEKPE 339
S +Q K IE + G S ++I G P +
Sbjct: 266 SLYLQGKDIEYSLAHGIAASTLVITVRGDNELTPTLED 303
|
| >1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A Length = 309 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 2e-27
Identities = 57/277 (20%), Positives = 100/277 (36%), Gaps = 44/277 (15%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVG--GERSLV---A 133
++G +G+D+ G +++ + GV++ ++ TG + G+ +
Sbjct: 48 VKVGFVGRVGEDELGAMVEERLRAEGVDLTHFRRAPGFTGL-YLREYLPLGQGRVFYYRK 106
Query: 134 NLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLV---AEHAAANNK--V 188
SA + + +E ++ +++G +SP++ E A
Sbjct: 107 G-SAGSALAPGAF----DPDYLEGVRFLHLSGITPALSPEARAFSLWAMEEAKRRGVRVS 161
Query: 189 FMMNLSAPF-ICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQW 247
+N E + LE+ LP +D +F +E EA VEE LS
Sbjct: 162 LDVNYRQTLWSPEEARGFLERALPGVDLLFLSEEEAELL-------FGRVEEALRALSA- 213
Query: 248 PKASEIRKRTAVITQGADPVVVAQDGK---LKKFPVIVLPKDKLVDTNGAGDAFVGGFLS 304
V+ +GA DG+ F V VD GAGDAF G+L+
Sbjct: 214 --------PEVVLKRGAKGAWAFVDGRRVEGSAFAVEA------VDPVGAGDAFAAGYLA 259
Query: 305 QLVQEKPIEECVRAGCYTSHVIIQRSGCT--YPEKPE 339
V P+EE +R + G P + +
Sbjct: 260 GAVWGLPVEERLRLANLLGASVAASRGDHEGAPYRED 296
|
| >2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} Length = 343 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 2e-26
Identities = 42/263 (15%), Positives = 81/263 (30%), Gaps = 42/263 (15%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCV-VGGERSLV---- 132
G S G +G D+ G + ++ +G++ A + + + GER +V
Sbjct: 81 GRASLWGAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYD 140
Query: 133 ANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT--VSPDSIQLVAEHAAANNKVFM 190
L + + L P+ V A A K +
Sbjct: 141 HRLHEK--------------KRACTPEDIALFDAVLVDVRWPELALDVLTVARALGKPAI 186
Query: 191 MNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKA 250
++ + LE + P +I +E A + + + V+++ L
Sbjct: 187 LDG-DVAP----VETLEGLAPAATHIVFSEPAATRLTGL-----ETVKDMLPVL-----H 231
Query: 251 SEIRKRTAVITQGADPVVVAQ--DGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQ 308
+ + +T G + D + + + VDT AGD F G F + +
Sbjct: 232 ARYPQTFIAVTAGPAGCWWTEADDPTVHFQTT---MQVEAVDTLAAGDIFHGTFALAMAE 288
Query: 309 EKPIEECVRAGCYTSHVIIQRSG 331
VR + + G
Sbjct: 289 GMQSRAAVRLSSVAAALKCTVFG 311
|
| >3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A* Length = 310 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 4e-25
Identities = 47/268 (17%), Positives = 80/268 (29%), Gaps = 65/268 (24%)
Query: 79 GA-TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCV-VGGERSLV---- 132
GA + G G D +++ + + V + +GT + V E +++
Sbjct: 70 GAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPG 129
Query: 133 AN--LSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT---VSPDSIQLVAEHAAANNK 187
AN L+ + V LT + + A A + +
Sbjct: 130 ANAHLTPV-------------PSAVANCD------VLLTQLEIPVATALAAARAAQSADA 170
Query: 188 VFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQW 247
V M+N +P + + +L+ + D + NE EA +
Sbjct: 171 VVMVNA-SPAGQD--RSSLQDLAAIADVVIANEHEANDWPSP------------------ 209
Query: 248 PKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLV 307
VIT G + + P P VDT GAGD F G +
Sbjct: 210 -------PTHFVITLGVRGARYVGADGVFEVPA---PTVTPVDTAGAGDVFAGVLAANWP 259
Query: 308 Q----EKPIEECVRAGCYTSHVIIQRSG 331
+ +R C + SG
Sbjct: 260 RNPGSPAERLRALRRACAAGALATLVSG 287
|
| >3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A* Length = 299 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 5e-25
Identities = 46/260 (17%), Positives = 89/260 (34%), Gaps = 48/260 (18%)
Query: 79 GA-TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCV-VGGERSLVANLS 136
G T I G D G +++ K + + + + T + G+ +++ +
Sbjct: 53 GIETRLIAATGNDSNGAWIRQQIKNEPLMLLPDGHFNQHSDTSIILNSADGDNAIITTTA 112
Query: 137 AANCYKSEHLKKPENWALVEKAKYFYIAGFFLT---VSPDSIQLVAEHAAANNKVFMMNL 193
AA+ + + + + A L S D + + ++A + + N
Sbjct: 113 AADTFSLDEMIP--HMADAVAGD------ILLQQGNFSLDKTRALFQYARSRGMTTVFNP 164
Query: 194 SAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEI 253
+P + P +D NE+EA L +
Sbjct: 165 -SP-----VNPDFCHLWPLIDIAVVNESEAEL------------------LQPYG----- 195
Query: 254 RKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE--KP 311
+T VITQGA + Q+G+ + P + +DT GAGD F+ L+ + P
Sbjct: 196 -VKTLVITQGAAGAWLVQEGQRQFCPA---VPAEALDTTGAGDTFLAVMLASALLRGVAP 251
Query: 312 IEECVRAGCYTSHVIIQRSG 331
+ + + + R G
Sbjct: 252 DALALAHASRAAAITVSRRG 271
|
| >3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* Length = 313 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 6e-25
Identities = 52/273 (19%), Positives = 93/273 (34%), Gaps = 39/273 (14%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVVGGERSL--VANL 135
+S I +G D FGE + + V+ +DE TG V + G S +
Sbjct: 48 VKSSLISKVGNDPFGEYLIEELSKENVDTRGIVKDEKKHTGIVFVQLKGASPSFLLYDD- 106
Query: 136 SAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP--DSIQLVAEHAAANNKV-FMMN 192
A + NW +VE+AK L +P +++ V + ++ + F +N
Sbjct: 107 VAYFNMTLNDI----NWDIVEEAKIVNFGSVILARNPSRETVMKVIKKIKGSSLIAFDVN 162
Query: 193 LSAPFIC---EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPK 249
L E LE+ + D + +E E + +
Sbjct: 163 LRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLE-----NQGVEVKGS-------- 209
Query: 250 ASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQ- 308
IT G + ++ + P +DT GAGDAF+ L +++
Sbjct: 210 ------MLTAITLGPKGCRLIKNETVVDVPS---YNVNPLDTTGAGDAFMAALLVGILKL 260
Query: 309 -EKPIEECVRAGCYTSHVIIQRSGCT-YPEKPE 339
+ + + + + Q+ G P K E
Sbjct: 261 KGLDLLKLGKFANLVAALSTQKRGAWSTPRKDE 293
|
| >3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} PDB: 3lki_A* Length = 338 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 2e-24
Identities = 59/288 (20%), Positives = 92/288 (31%), Gaps = 44/288 (15%)
Query: 79 GATSYIGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVVG--GERSLV--A 133
GA ++G +G D FG+ + + AGV +A T A + GERS
Sbjct: 51 GAVQFVGMLGSDMFGDFLFDSFAEAGVVTDGIVRTSTAKTAL-AFVALDAHGERSFSFYR 109
Query: 134 NLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSP--DSIQLVAEHAAANNKVFMM 191
+A ++ EH A A F+ +T + + A A +
Sbjct: 110 PPAADLLFRVEHF----QDASFSDALIFHACSNSMTDADIAEVTFEGMRRAQAAGAIVSF 165
Query: 192 --NLSAPFI--CEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQW 247
N E L K L D + + E + D + +L Q
Sbjct: 166 DLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLA---NTLAADANAVIQQLWQG 222
Query: 248 PKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLV 307
+ ++T A PV + P + ++ D+N AGDAFVGG L
Sbjct: 223 RA------QLLLVTDAAGPVHWYTRTAGGEVPT---FRVQVQDSNAAGDAFVGGMLYTFA 273
Query: 308 Q--------------EKPIEECVRAGCYTSHVIIQRSGCT--YPEKPE 339
Q + I +R + + R G P E
Sbjct: 274 QQFDDAAALIDFCHDPESIVSTLRFAAAVGALAVTRQGAFTAMPMLSE 321
|
| >3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} Length = 313 | Back alignment and structure |
|---|
Score = 98.8 bits (246), Expect = 6e-24
Identities = 47/256 (18%), Positives = 88/256 (34%), Gaps = 31/256 (12%)
Query: 84 IGCIGKDKFGEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVVG-GERSLVANLSAANCY 141
+G +G D FG+E ++ E T A + + N +
Sbjct: 49 VGVVGSD-FGKEHFDLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLD-TQLNVF 106
Query: 142 KSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEF 201
P+ + + + P+ V + V + F E
Sbjct: 107 AEFDPHVPQYYRDSKFV-------CLGNIDPELQLKVLDQIDDPKLVVCDTM--NFWIEG 157
Query: 202 FKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVIT 261
+ L+KVL +D N++EAR S ++ + A + + +T +I
Sbjct: 158 KPEELKKVLARVDVFIVNDSEARLLS-----GDPNLVKTARIIREM------GPKTLIIK 206
Query: 262 QGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQ-----EKPIEECV 316
+G ++ D + P P + + D GAGD F GGF+ L + E + + V
Sbjct: 207 KGEHGALLFTDNGIFAAPAF--PLESIYDPTGAGDTFAGGFIGHLARCGNTSEAEMRKAV 264
Query: 317 RAGCYTSHVIIQRSGC 332
G + +++ G
Sbjct: 265 LYGSAMASFCVEQFGP 280
|
| >3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} Length = 346 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 2e-18
Identities = 47/264 (17%), Positives = 92/264 (34%), Gaps = 34/264 (12%)
Query: 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCV-VGGERSLVANL---- 135
T+ I + ++ GE K + G++ + ++ G+ + G + V
Sbjct: 51 TALITKLPANRLGEAGKAALRKLGISDQWVGEKGDHIGSFFAEMGYGIRPTQVTYQNRHQ 110
Query: 136 SAANCYKSEHLKKPENW-ALVEKAKYFYIAGFFLTVSPDSIQLV---AEHAAANNK--VF 189
SA +++ ++ A + + +I G L+++ + A+ A A K F
Sbjct: 111 SAFGISEAKDY----DFEAFLAEVDMVHICGISLSLTEKTRDAALILAQKAHAYQKKVCF 166
Query: 190 MMNLSAPFI----CEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVE----EIA 241
N F + E++LPY D +FG+ + E + E E+
Sbjct: 167 DFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLGFIPREDLEGEAQETELI 226
Query: 242 LKLSQWPKASEI--RKRTAVITQGADPVVVAQDGKL---KKFPVIVLPKDKLVDTNGAGD 296
+ R+ Q + + +K P++ +D GAGD
Sbjct: 227 QRFMSQYNLEWFAGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPLLN------LDRIGAGD 280
Query: 297 AFVGGFLSQLVQEKPIEECVRAGC 320
A+ G L Q +E+ V
Sbjct: 281 AYAAGILYGYSQNWSLEKAVTFAT 304
|
| >2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 Length = 351 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 3e-17
Identities = 40/266 (15%), Positives = 86/266 (32%), Gaps = 30/266 (11%)
Query: 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAV-CVVGGERSLVA---NLS 136
++ + + G+ + + GV Y G + S V S
Sbjct: 61 AYFVTKLPNNPLGDAAAGHLRKFGVKTDYIARGGNRIGIYFLEIGASQRPSKVVYDRAHS 120
Query: 137 AANCYKSEHLKKPENW-ALVEKAKYFYIAGFFLTVSPDSIQLV---AEHAAANNK--VFM 190
A + K E +W +++ A++F+ +G + + ++ + A
Sbjct: 121 AISEAKREDF----DWEKILDGARWFHFSGITPPLGKELPLILEDALKVANEKGVTVSCD 176
Query: 191 MNLSAPFI-CEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPK 249
+N A E + + + Y+D + NE + + D + +
Sbjct: 177 LNYRARLWTKEEAQKVMIPFMEYVDVLIANEEDIEKVLGISVEGLDLKTGKLNREAYAKI 236
Query: 250 ASEIRK----RTAVITQGADPV--------VVAQDGKLKKFPVIVLPKDKLVDTNGAGDA 297
A E+ + +T IT +V ++G+ + +VD GAGD+
Sbjct: 237 AEEVTRKYNFKTVGITLRESISATVNYWSVMVFENGQPHFSNRYEI---HIVDRVGAGDS 293
Query: 298 FVGGFLSQLVQEKPIEECVRAGCYTS 323
F G + + ++ S
Sbjct: 294 FAGALIYGSLMGFDSQKKAEFAAAAS 319
|
| >2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A* Length = 323 | Back alignment and structure |
|---|
Score = 51.8 bits (125), Expect = 1e-07
Identities = 15/91 (16%), Positives = 31/91 (34%), Gaps = 14/91 (15%)
Query: 233 ETDDVEEIALKLSQWPKASEIRKRTA---VITQGAD-PVVVAQDGKLKKFPVIVLPKDKL 288
+ + + ++ VI+ G D + D + P +
Sbjct: 200 SENPLAAVQ------TALTKPMFAGIEWIVISLGKDGAIAKHHDQFYRVKI----PTIQA 249
Query: 289 VDTNGAGDAFVGGFLSQLVQEKPIEECVRAG 319
+ G+GDA + G L ++ P E ++ G
Sbjct: 250 KNPVGSGDATIAGLAYGLAKDAPAAELLKWG 280
|
| >3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A* Length = 309 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 1e-07
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Query: 219 NETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGAD-PVVVAQDGKLKK 277
N+ E + + DDV + A ++ KA + V++ G + V + ++
Sbjct: 187 NQKELSALVNRELTQPDDVRKAAQEIVNSGKA-----KRVVVSLGPQGALGVDSENCIQV 241
Query: 278 FPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAG 319
P P K T GAGD+ VG +L + +EE VR G
Sbjct: 242 VP----PPVKSQSTVGAGDSMVGAMTLKLAENASLEEMVRFG 279
|
| >2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1 Length = 306 | Back alignment and structure |
|---|
Score = 50.6 bits (122), Expect = 2e-07
Identities = 27/154 (17%), Positives = 54/154 (35%), Gaps = 24/154 (15%)
Query: 170 VSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYM-DYIFGNETEARTFSK 228
+ + + + A A + +AL +VL +I N E
Sbjct: 139 MPQTIYRSMTQIAKERG--------AFVAVDTSGEALHEVLAAKPSFIKPNHHELSELVS 190
Query: 229 VQGWETDDVEEIALKLSQWPKASEIRK--RTAVITQGAD-PVVVAQDGKLKKFPVIVLPK 285
+D +L I + + +++ D + + +G P
Sbjct: 191 KPIASIEDAIPHVQRL--------IGEGIESILVSFAGDGALFASAEGMFHVNV----PS 238
Query: 286 DKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAG 319
++ ++ GAGD+ V GFL+ L + K +E+ V
Sbjct: 239 GEVRNSVGAGDSVVAGFLAALQEGKSLEDAVPFA 272
|
| >2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus} Length = 306 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 4e-07
Identities = 31/154 (20%), Positives = 62/154 (40%), Gaps = 24/154 (15%)
Query: 170 VSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYM-DYIFGNETEARTFSK 228
+ D+ +A+ A A + + K+ E VLPY +I N+ E
Sbjct: 139 IPSDAYAQIAQITAQTG--------AKLVVDAEKELAESVLPYHPLFIKPNKDELEVMFN 190
Query: 229 VQGWETDDVEEIALKLSQWPKASEIRK--RTAVITQGAD-PVVVAQDGKLKKFPVIVLPK 285
DV + L + K ++ +++ G D + + ++ +K P+
Sbjct: 191 TTVNSDADVIKYGRLL--------VDKGAQSVIVSLGGDGAIYIDKEISIKAVN----PQ 238
Query: 286 DKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAG 319
K+V+T G+GD+ V G ++ + IE+ +
Sbjct: 239 GKVVNTVGSGDSTVAGMVAGIASGLSIEKAFQQA 272
|
| >2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A* Length = 330 | Back alignment and structure |
|---|
Score = 49.1 bits (118), Expect = 8e-07
Identities = 10/74 (13%), Positives = 26/74 (35%), Gaps = 8/74 (10%)
Query: 250 ASEIRKRTA---VITQGAD-PVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQ 305
S+ +++ GA + P +++ G+GD+ V G S
Sbjct: 228 VSQPLFEGIEWIIVSLGAQGAFAKHNHTFYRVNI----PTISVLNPVGSGDSTVAGITSA 283
Query: 306 LVQEKPIEECVRAG 319
++ + + ++
Sbjct: 284 ILNHENDHDLLKKA 297
|
| >3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A Length = 320 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 1e-06
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 256 RTAVITQGAD-PVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEE 314
V++ GA + + P PK + + GAGD FVG F++ L PI E
Sbjct: 216 PYLVVSLGAKGSICAHNGKLYQVIP----PKVQERNDTGAGDVFVGAFIAGLAMNMPITE 271
Query: 315 CVRAG 319
++
Sbjct: 272 TLKVA 276
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.8 bits (110), Expect = 8e-06
Identities = 50/342 (14%), Positives = 94/342 (27%), Gaps = 80/342 (23%)
Query: 16 DISSVVDDDFLNKYDIK-----LNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRV 70
DI SV +D F++ +D K + + EE D + + +
Sbjct: 20 DILSVFEDAFVDNFDCKDVQDMPKSILSKEE-----IDHIIMSKDAV--------SGTLR 66
Query: 71 AQWMLQIPGATSYIGCIGKDKF-GEEMKKNSKLAGVNVHY-YEDESASTGTCAVCVVGGE 128
W L KF E ++ N K + S T
Sbjct: 67 LFWTLLSKQEEMV------QKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQ----- 115
Query: 129 RSLVAN----LSAANCYKSEHLKKPENWAL-VEKAKYFYI---AGFFLTVSPDSIQLVAE 180
R + N + N + + K L + AK I G T + +
Sbjct: 116 RDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTW------VALD 169
Query: 181 -------HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMD--YIFGNETEARTFSKVQG 231
+ K+F +NL E + L+K+L +D + ++ + ++
Sbjct: 170 VCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS 229
Query: 232 WET------------------DDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDG 273
+ +V+ W A + + + T+ V
Sbjct: 230 IQAELRRLLKSKPYENCLLVLLNVQNAKA----W-NAFNLSCKILLTTRFKQ-VTDFLSA 283
Query: 274 KLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEEC 315
+ L T + + +L Q+ P E
Sbjct: 284 ATTTHISLDHHSMTL--TPDEVKSLLLKYLDCRPQDLPREVL 323
|
| >2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1 Length = 331 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 2e-05
Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 7/74 (9%)
Query: 250 ASEIRKR--TAVITQGAD-PVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQL 306
A ++ ++ +V++ +V ++G + GAGDA+V G +
Sbjct: 227 AEKLAEKSQVSVVSYEVKNDIVATREGVWLIRSK---EEIDTSHLLGAGDAYVAGMVYYF 283
Query: 307 VQE-KPIEECVRAG 319
++ E + G
Sbjct: 284 IKHGANFLEMAKFG 297
|
| >3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} PDB: 1td2_A* 1vi9_A* Length = 289 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 24/183 (13%), Positives = 55/183 (30%), Gaps = 33/183 (18%)
Query: 171 SPDSIQLVAEHAAANNKVFMMNLSAPFIC---------------EFFKDALEKVLPYMDY 215
SP+ + A +V N A + C + + LP D
Sbjct: 88 SPEQGSHILAAVA---QVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFCNEALPASDM 144
Query: 216 IFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADP--------V 267
I N E S + + ++A L + ++ + +
Sbjct: 145 IAPNLLELEQLSGERVENVEQAVQVARSLC------ARGPKVVLVKHLSRAGYHADCFEM 198
Query: 268 VVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVII 327
++ ++ K G GD G L L++ +P+++ + + ++
Sbjct: 199 LLVTADDAWHICRPLVDFGK-RQPVGVGDLTSGLLLVNLLKGEPLDKALEHVTAAVYEVM 257
Query: 328 QRS 330
++
Sbjct: 258 LKT 260
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 341 | |||
| 3otx_A | 347 | Adenosine kinase, putative; AP5A, transferase-tran | 100.0 | |
| 3loo_A | 365 | Anopheles gambiae adenosine kinase; AP4A, P4-DI(ad | 100.0 | |
| 3vas_A | 370 | Putative adenosine kinase; ribokinase, enzyme, tra | 100.0 | |
| 3uq6_A | 372 | Adenosine kinase, putative; ribokinase, transferas | 100.0 | |
| 1bx4_A | 345 | Protein (adenosine kinase); human adenosine kinase | 100.0 | |
| 2abs_A | 383 | Adenosine kinase, AK; ribokinase fold, alpha/beta, | 100.0 | |
| 4e3a_A | 352 | Sugar kinase protein; structural genomics, protein | 100.0 | |
| 3ry7_A | 304 | Ribokinase; transferase; 2.15A {Staphylococcus aur | 100.0 | |
| 1rkd_A | 309 | Ribokinase; carbohydrate kinase, ribose, nucleotid | 100.0 | |
| 2fv7_A | 331 | Ribokinase; structural genomics, structural genomi | 100.0 | |
| 3lhx_A | 319 | Ketodeoxygluconokinase; structural genomics, PSI-2 | 100.0 | |
| 4du5_A | 336 | PFKB; structural genomics, PSI-biology, NEW YORK s | 100.0 | |
| 3ljs_A | 338 | Fructokinase; fructokianse, PSI2, NYSGXRC, structu | 100.0 | |
| 2rbc_A | 343 | Sugar kinase, AGR_C_4560P; ribokinase family, ATP- | 100.0 | |
| 3iq0_A | 330 | Putative ribokinase II; transferase,kinase,SAD,rib | 100.0 | |
| 3ktn_A | 346 | Carbohydrate kinase, PFKB family; PFKB family,ribo | 100.0 | |
| 3kzh_A | 328 | Probable sugar kinase; NYSGXRC, PSI-II, protein st | 100.0 | |
| 3go6_A | 310 | Ribokinase RBSK; phosphofructokinase, carbohydrate | 100.0 | |
| 3hj6_A | 327 | Fructokinase, FRK; fructose, transferase, carbohyd | 100.0 | |
| 3pl2_A | 319 | Sugar kinase, ribokinase family; PFKB PFAM motif, | 100.0 | |
| 3ikh_A | 299 | Carbohydrate kinase; transferase,kinase,SAD,ribose | 100.0 | |
| 4e69_A | 328 | 2-dehydro-3-deoxygluconokinase; putative sugar kin | 100.0 | |
| 3h49_A | 325 | Ribokinase; transferase,PFKB family,sugar kinase Y | 100.0 | |
| 2c4e_A | 302 | Sugar kinase MJ0406; transferase, nucleoside kinas | 100.0 | |
| 2qcv_A | 332 | Putative 5-dehydro-2-deoxygluconokinase; structura | 100.0 | |
| 2nwh_A | 317 | AGR_C_3442P, carbohydrate kinase; structural genom | 100.0 | |
| 3umo_A | 309 | 6-phosphofructokinase isozyme 2; glycolysis, trans | 100.0 | |
| 1vm7_A | 311 | Ribokinase; TM0960, structural genomics, JCSG, pro | 100.0 | |
| 2v78_A | 313 | Fructokinase; transferase, PFKB family carbohydrat | 100.0 | |
| 2f02_A | 323 | Tagatose-6-phosphate kinase; LACC, structural geno | 100.0 | |
| 2jg1_A | 330 | Tagatose-6-phosphate kinase; phosphoryl transfer, | 100.0 | |
| 2dcn_A | 311 | Hypothetical fructokinase; 2-keto-3-deoxygluconate | 100.0 | |
| 1tyy_A | 339 | Putative sugar kinase; ribokinase fold, alpha/beta | 100.0 | |
| 1v1a_A | 309 | 2-keto-3-deoxygluconate kinase; ATP, structural ge | 100.0 | |
| 3cqd_A | 309 | 6-phosphofructokinase isozyme 2; phosphofructokina | 100.0 | |
| 4gm6_A | 351 | PFKB family carbohydrate kinase; enzyme function i | 100.0 | |
| 3ie7_A | 320 | LIN2199 protein; phosphofructokinases, transferase | 100.0 | |
| 4e84_A | 352 | D-beta-D-heptose 7-phosphate kinase; LPS-heptose b | 100.0 | |
| 2ajr_A | 331 | Sugar kinase, PFKB family; TM0828, possible 1-phos | 100.0 | |
| 2hlz_A | 312 | Ketohexokinase; non-protein kinase, creatine kinas | 100.0 | |
| 3ewm_A | 313 | Uncharacterized sugar kinase PH1459; carbohydrate | 100.0 | |
| 2abq_A | 306 | Fructose 1-phosphate kinase; dimer, structural gen | 100.0 | |
| 3b1n_A | 326 | Ribokinase, putative; rossmann fold, ATP binding, | 100.0 | |
| 2pkf_A | 334 | Adenosine kinase; transferase, S genomics, TB stru | 100.0 | |
| 3kd6_A | 313 | Carbohydrate kinase, PFKB family; nucleoside kinas | 100.0 | |
| 2jg5_A | 306 | Fructose 1-phosphate kinase; 1-phosphofructokinase | 100.0 | |
| 2qhp_A | 296 | Fructokinase; NP_810670.1, PFKB family carbohydrat | 100.0 | |
| 2afb_A | 351 | 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro- | 100.0 | |
| 3bf5_A | 306 | Ribokinase related protein; 10640157, putative rib | 100.0 | |
| 1vk4_A | 298 | PFKB carbohydrate kinase TM0415; structural genomi | 100.0 | |
| 2yxt_A | 312 | Pyridoxal kinase; beta sheet with alpha helix, met | 99.92 | |
| 2ddm_A | 283 | Pyridoxine kinase; pyridoxal kinase, ribokinase, p | 99.91 | |
| 1jxh_A | 288 | Phosphomethylpyrimidine kinase; THID, ribokinase f | 99.9 | |
| 1ub0_A | 258 | THID, phosphomethylpyrimidine kinase; thiamin bios | 99.88 | |
| 2i5b_A | 271 | Phosphomethylpyrimidine kinase; ADP complex, PDXK, | 99.83 | |
| 3pzs_A | 289 | PM kinase, pyridoxamine kinase; structural genomic | 99.82 | |
| 3h74_A | 282 | Pyridoxal kinase; PSI-II, structural genomics, pro | 99.81 | |
| 3mbh_A | 291 | Putative phosphomethylpyrimidine kinase; structura | 99.78 | |
| 3zs7_A | 300 | Pyridoxal kinase; transferase, sleeping sickness; | 99.77 | |
| 1ekq_A | 272 | Hydroxyethylthiazole kinase; alpha-beta, transfera | 99.65 | |
| 3rm5_A | 550 | Hydroxymethylpyrimidine/phosphomethylpyrimidine K | 99.57 | |
| 1v8a_A | 265 | Hydroxyethylthiazole kinase; alpha-beta, ATP bindi | 99.27 | |
| 3bgk_A | 311 | SMU.573, putative uncharacterized protein; alpha/b | 98.99 | |
| 2r3b_A | 310 | YJEF-related protein; putative kinase in the ribok | 98.99 | |
| 3dzv_A | 273 | 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_ | 98.9 | |
| 3drw_A | 474 | ADP-specific phosphofructokinase; AMP, GLYC kinase | 98.9 | |
| 3rss_A | 502 | Putative uncharacterized protein; unknown function | 98.78 | |
| 3rpz_A | 279 | ADP/ATP-dependent NAD(P)H-hydrate dehydratase; str | 98.68 | |
| 1gc5_A | 467 | ADP-dependent glucokinase; ALFA/beta sandwichs, in | 98.41 | |
| 1l2l_A | 457 | ADP-dependent glucokinase; ADP glucokinase APO, tr | 98.41 | |
| 1ua4_A | 455 | Glucokinase, ADP-dependent glucokinase; transferas | 98.4 | |
| 3nl6_A | 540 | Thiamine biosynthetic bifunctional enzyme; thiamin | 98.3 | |
| 3hpd_A | 265 | Hydroxyethylthiazole kinase; alpha-beta, ATP bindi | 98.16 | |
| 3k5w_A | 475 | Carbohydrate kinase; 11206B,helicobacter pylori,PS | 97.35 |
| >3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-58 Score=421.23 Aligned_cols=339 Identities=40% Similarity=0.716 Sum_probs=301.5
Q ss_pred CCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcC-CCc-
Q 019448 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQI-PGA- 80 (341)
Q Consensus 3 ~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~l-g~~- 80 (341)
+..+|+++|++++|++..++++||++|++++|+.++.++.++|..++..+.......+||++.|+|+++++|+++ |.+
T Consensus 6 ~~~~v~~iG~~~lD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~~~~~~~~~~~~~GG~~~N~a~~la~L~~~~G~~~ 85 (347)
T 3otx_A 6 APLRVYVQCNPLLDVSAHVSDEFLVKYGLERGTAILLSERQKGIFDDIEKMPNVRYVPGGSGLNVARVAQWMQQAYKGKF 85 (347)
T ss_dssp CCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGTTHHHHHHTSTTCEEEECCHHHHHHHHHHHTTGGGTTSS
T ss_pred CCCcEEEECCceeeEEEecCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEecCCHHHHHHHHHHHhcccCCCCe
Confidence 566899999999999999999999999999999999999999999999999999999999999999999984322 688
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccceE
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKY 160 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 160 (341)
+.++|.+|+|.+|+.+++.|++.||+++++...+.+|+.+++++++|+|+++.+.++...++++++.....+..++++++
T Consensus 86 ~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~T~~~~i~~~~g~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~ 165 (347)
T 3otx_A 86 VTYVGCIADDRYGKVLKEAAEHEGIVMAVEHTTKAGSGACAVCITGKERTLVADLGAANHLSSEHMRSPAVVRAMDESRI 165 (347)
T ss_dssp EEEECEECSSHHHHHHHHHHHHHTCEECCEECSSSCEEEEEEEEETTEEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSE
T ss_pred EEEEEEecCChHHHHHHHHHHHCCCceecccCCCCCCeEEEEEEECCceeeeechhhhhcCCHHHcCchhhHHHHhhCCE
Confidence 99999999999999999999999999999876777899998888889999988888888899888875434567899999
Q ss_pred EEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHH
Q 019448 161 FYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 240 (341)
Q Consensus 161 v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~ 240 (341)
+|++++.+..+++.+.++++.++++++++++|++.+.|...+++.+.++++++|++++|++|++.|++..+.+.++++++
T Consensus 166 ~~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~~~dil~~N~~Ea~~l~~~~~~~~~~~~~~ 245 (347)
T 3otx_A 166 FYFSGFTLTVDVNHVLQACRKAREVDGLFMINLSAPFIMQFFSAQLGEVLPYTDIIVANRHEAKEFANMMKWDTDCVEEI 245 (347)
T ss_dssp EEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHHTCCCCCHHHH
T ss_pred EEEeeeecccCHHHHHHHHHHHHHhCCEEEeeCchhhhHHHHHHHHHHHHhhCCEEecCHHHHHHHhcccCCCcCCHHHH
Confidence 99999887788999999999999999999999998877777778899999999999999999999998776667889999
Q ss_pred HHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHH
Q 019448 241 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGC 320 (341)
Q Consensus 241 ~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~ 320 (341)
++++.++++....+++.||||+|++|++++++++.+++|+++++..+++|||||||+|+|||+++|++|+++++|+++|+
T Consensus 246 ~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~~g~~l~~a~~~a~ 325 (347)
T 3otx_A 246 ARRAVSEVPYTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMGGFLSAYAVGKDLRRCCETGH 325 (347)
T ss_dssp HHHHHHTSCCCCSSCCEEEEEETTEEEEEEETTEEEEECCCCCCGGGCCSSCCSHHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHhhhccccCCCCEEEEEeCCCCeEEEECCeEEEEEecccCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 99985432111468899999999999999999988888887665558899999999999999999999999999999999
Q ss_pred HHhhhhhhhccccCCCCCCCC
Q 019448 321 YTSHVIIQRSGCTYPEKPEFN 341 (341)
Q Consensus 321 ~~Aa~~v~~~g~~~p~~~~~~ 341 (341)
++|+++|++.|+.+|++++|+
T Consensus 326 ~~aa~~v~~~G~~~p~~~~~~ 346 (347)
T 3otx_A 326 YTAQEVIQRDGCSFPEKPSFS 346 (347)
T ss_dssp HHHHHHHTCC----CCSCSCC
T ss_pred HHHHHHHcccCCCCCCCCCCC
Confidence 999999999999999998874
|
| >3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-58 Score=423.02 Aligned_cols=338 Identities=51% Similarity=0.920 Sum_probs=299.3
Q ss_pred CceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEE
Q 019448 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~ 83 (341)
+.+|+++|++++|++..++++||++|++++|+.++.++.++|..++..+.......+||++.|+|+++++|.++|.++.+
T Consensus 23 ~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~e~~~~~~~~~~~GG~~~N~a~~~~~L~~lG~~~~~ 102 (365)
T 3loo_A 23 DGMLVGLGNPLLDISAVVEKDLLNKYDMQPNNAILAEEKHMPMYQELIEKYQAEYIAGGSVQNSLRVAQWILQRPRTAIF 102 (365)
T ss_dssp TTSEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGTHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHTCTTSEEE
T ss_pred CccEEEECCCeEeEEEecCHHHHHHcCCCCCCceechhHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhhcCCCcEEE
Confidence 45899999999999999999999999999999999998999999999998889999999999999999997777899999
Q ss_pred EeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccceEEEE
Q 019448 84 IGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYI 163 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~i 163 (341)
+|.+|+|.+|+.+++.|++.||+++++...+.+|+.+++++++++|+++.+.++...++++++.....+..+.+++++|+
T Consensus 103 ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~Tg~~~i~~~~~~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~v~i 182 (365)
T 3loo_A 103 FGCVGQDEYARILEERATSNGVNVQYQRSATSPTGTCAVLVTGTQRSLCANLAAANDFTPEHLRSDGNRAYLQGAQFFYV 182 (365)
T ss_dssp EEEEESBHHHHHHHHHHHHHTCEEEEEEESSSCCEEEEEEEETTEEEEEEECGGGGGCCGGGGGSHHHHHHHHHCSEEEE
T ss_pred EEEecCCchHHHHHHHHHHCCCceeccccCCCCCeEEEEEEECCceEEEeccchHhhCCHhHcCchhhHHHHhhCCEEEE
Confidence 99999999999999999999999999876777899998888888898888888888999998875444567889999999
Q ss_pred eccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHHH
Q 019448 164 AGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALK 243 (341)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~~ 243 (341)
+++.+..+++.+..+++.++++++++++|++.+.|....++.+.++++++|++++|++|++.|++..+++.+++++++++
T Consensus 183 ~G~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~l~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~ 262 (365)
T 3loo_A 183 SGFFFTVSFESALSVAKEAAATGRMFMMNLSAPFVPQFYKNNLEEIFPYVDVLFGNETEAIALAKEFNYGTEDLREIGKR 262 (365)
T ss_dssp EGGGHHHHHHHHHHHHHHHHHTTCEEEEECCSTHHHHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCCCHHHHHHH
T ss_pred eeeeccCCHHHHHHHHHHHHHcCCEEEEECCchhhhHHHHHHHHHHHHhCCEEecCHHHHHHHhcccCCCCCCHHHHHHH
Confidence 99887777889999999999999999999988877777788899999999999999999999998877777899999999
Q ss_pred HhcCCccccCCccEEEEEeCCCceEEE--ECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHH
Q 019448 244 LSQWPKASEIRKRTAVITQGADPVVVA--QDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCY 321 (341)
Q Consensus 244 l~~~~~~~~~~~~~vvvt~G~~G~~~~--~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~ 321 (341)
+.++.+....+++.+|||+|++|++++ ++++.+++|+++++..+++|||||||+|+|||+++|++|+++++|+++|++
T Consensus 263 l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~agfl~~l~~g~~l~~a~~~a~~ 342 (365)
T 3loo_A 263 IAALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFVGGFLAQLLQSRTVDVCIKCGIW 342 (365)
T ss_dssp HHTSCCSSTTSCCEEEEEETTEEEEEEETTCSCCEEECCCCCC------CTTHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHhhhhhccCCCCEEEEEeCCCCEEEEEecCCeEEEEeccccCCCCccCCCChHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 854321112478999999999999999 777888888876644589999999999999999999999999999999999
Q ss_pred HhhhhhhhccccCCCCCCCC
Q 019448 322 TSHVIIQRSGCTYPEKPEFN 341 (341)
Q Consensus 322 ~Aa~~v~~~g~~~p~~~~~~ 341 (341)
+|+++|++.|+.+|.+++|+
T Consensus 343 ~Aa~~v~~~G~~~p~~~~~~ 362 (365)
T 3loo_A 343 AAREIIQRSGCTFEGEPSFC 362 (365)
T ss_dssp HHHHHHHHGGGGGGSCCCC-
T ss_pred HHHHHHcCCCCCCCCCccCC
Confidence 99999999999999999874
|
| >3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-58 Score=424.55 Aligned_cols=339 Identities=38% Similarity=0.680 Sum_probs=304.6
Q ss_pred CCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEE
Q 019448 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATS 82 (341)
Q Consensus 3 ~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~ 82 (341)
|+.+|+++|++++|++..++++||++|++++|+..+.+++++|.+++..+..+....+||+++|+|+++++|+++|.++.
T Consensus 23 ~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~P~~ge~~~~~~~~~~~GG~~~N~A~~la~L~~~G~~~~ 102 (370)
T 3vas_A 23 SEGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCS 102 (370)
T ss_dssp CTTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTHHHHHHTTSSSCEEEEECHHHHHHHHHHHHHCCTTCEE
T ss_pred CCccEEEECCcceeEEEecCHHHHHHcCCCCCceEEccHHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhcCCCCcEE
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999655579999
Q ss_pred EEeeeecCchhHHHHHHHHhcCcceeeeec-CCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccceEE
Q 019448 83 YIGCIGKDKFGEEMKKNSKLAGVNVHYYED-ESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYF 161 (341)
Q Consensus 83 ~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~-~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 161 (341)
|+|.+|+|.+|+.+++.|++.||+++++.. .+.+|+.+++++++|+|+++.+.+++..++++++........+.+++++
T Consensus 103 ~ig~vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~~g~rt~~~~~ga~~~l~~~~~~~~~~~~~~~~~~~v 182 (370)
T 3vas_A 103 YVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVSEKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQVY 182 (370)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEECSSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSEE
T ss_pred EEEEEcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEeCCceeEEEccchhhhCCHHHcCchhhHHHHhhCCEE
Confidence 999999999999999999999999999876 6778999988888889999888888889999888753345678999999
Q ss_pred EEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHH
Q 019448 162 YIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIA 241 (341)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~ 241 (341)
|++++.+..+++.+..+++.++++++++++|++.+.|....++.+.++++++|++++|++|++.|++....+.+++++++
T Consensus 183 ~~~g~~~~~~~~~~~~~~~~a~~~g~~v~ld~~~~~~~~~~~~~l~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~ 262 (370)
T 3vas_A 183 YIAGFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTVHATA 262 (370)
T ss_dssp EEEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSSHHHHHH
T ss_pred EEEeeeccCCHHHHHHHHHHHHHcCCEEEEECCcHHHHHHHHHHHHHHHhhCCEEEcCHHHHHHHhcccCCCccCHHHHH
Confidence 99998877778899999999999999999999988887777788899999999999999999999987666667889999
Q ss_pred HHHhcCCccccC-CccEEEEEeCCCceEEEE--CCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHH
Q 019448 242 LKLSQWPKASEI-RKRTAVITQGADPVVVAQ--DGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRA 318 (341)
Q Consensus 242 ~~l~~~~~~~~~-~~~~vvvt~G~~G~~~~~--~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~ 318 (341)
+++.++++.... +++.||||+|++|+++++ +++.+++|+++++..+++|||||||+|+|||+++|++|+++++|+++
T Consensus 263 ~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag~l~~l~~g~~l~~a~~~ 342 (370)
T 3vas_A 263 RYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKPMITSLHA 342 (370)
T ss_dssp HHHHHSCCTTCCCCCCEEEEEETTEEEEEEETTCSSCEEECCCCCCTTTCSCCTTHHHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred HHHHhhcccccccCCCEEEEecCCCceEEEEcCCCeEEEEecccccCCCcCCCCChHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 998432110113 789999999999999998 78888999887655589999999999999999999999999999999
Q ss_pred HHHHhhhhhhhccccCCCCCCCC
Q 019448 319 GCYTSHVIIQRSGCTYPEKPEFN 341 (341)
Q Consensus 319 a~~~Aa~~v~~~g~~~p~~~~~~ 341 (341)
|+++|+++|++.|+.+|+.++|+
T Consensus 343 A~aaAa~~v~~~G~~~p~~~~~~ 365 (370)
T 3vas_A 343 AVKAAAYIICRSGFSLGSRDSYS 365 (370)
T ss_dssp HHHHHHHHHTSSSSCCCCGGGGC
T ss_pred HHHHHHHHHcccCCcCCCCccce
Confidence 99999999999999999998864
|
| >3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-56 Score=411.36 Aligned_cols=338 Identities=38% Similarity=0.679 Sum_probs=299.2
Q ss_pred CceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEE
Q 019448 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~ 83 (341)
+..|++||++++|++..+|++||.+|++++|+.++.++++.+..++..........+||+++|+|+++++|.+.+..+.|
T Consensus 26 ~~~v~giGnalvDi~~~v~d~~l~~~~l~kg~m~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a~~la~LG~~~~~~~f 105 (372)
T 3uq6_A 26 EGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCSY 105 (372)
T ss_dssp TTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTTHHHHHHTSSSCEEEECCHHHHHHHHHHHHHCSTTSEEE
T ss_pred CCeEEEECCceeeEEEEeCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEeCCcHHHHHHHHHHHcCCCCCcEEE
Confidence 44699999999999999999999999999999999999999999999998889999999999999999997655567999
Q ss_pred EeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccceEEE
Q 019448 84 IGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFY 162 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 162 (341)
+|.||+|.+|+++++.|++.||+++++. ..+.+|+.+++++++++|+++.+.++...+++++++.+..+..++.++++|
T Consensus 106 iG~VG~D~~G~~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~~dgert~~~~~ga~~~l~~~~i~~~~~~~~i~~a~~~~ 185 (372)
T 3uq6_A 106 VGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVSEKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQVYY 185 (372)
T ss_dssp EEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEECSSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSEEE
T ss_pred EeeecCCHHHHHHHHHHHHcCCCceeeeecCCCCceEEEEEcCCCceEEEEeccchhhcchhhhhhhhHHHHhhcccEEE
Confidence 9999999999999999999999999875 455678888888889999999999999999999998766677899999999
Q ss_pred EeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHH
Q 019448 163 IAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL 242 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~ 242 (341)
++++.+..+++.+.++++.+++++.++.+|++.+.+....++.+.++++++|++++|++|++.|++......++.+++++
T Consensus 186 ~~g~~~~~~~~~~~~~~~~a~~~g~~v~ldls~~~~~~~~~~~l~~ll~~~Dil~~Ne~Ea~~l~~~~~~~~~~~~~~a~ 265 (372)
T 3uq6_A 186 IAGFVINTCYEGMLKIAKHSLENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTVHATAR 265 (372)
T ss_dssp EEGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSSHHHHHHH
T ss_pred EecccccccHHHHHHHHHHHHHcCCeEeeccccchhhhhhHHHHHHHhhcCCcccCCHHHHHHHhCCCCCchhHHHHHHH
Confidence 99987766778899999999999999999999887777788889999999999999999999999987777778888888
Q ss_pred HHhcCCc-cccCCccEEEEEeCCCceEEEECCe--eEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHH
Q 019448 243 KLSQWPK-ASEIRKRTAVITQGADPVVVAQDGK--LKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAG 319 (341)
Q Consensus 243 ~l~~~~~-~~~~~~~~vvvt~G~~G~~~~~~~~--~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a 319 (341)
.+.++.. ....+.+.+|||+|++|++++++++ ...++.++.+..++||||||||+|+|||+++|++|+++++|+++|
T Consensus 266 ~l~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~v~~~~~~~vVDTtGAGDaF~agfl~~l~~g~~l~~a~~~a 345 (372)
T 3uq6_A 266 YIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIRGKPMITSLHAA 345 (372)
T ss_dssp HHHHSCCTTCCCCCCEEEEEETTEEEEEEESSCSSCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred HHhhhhhhhhcCCceEEEEcCCCCceEEecCCCceeeeeeccCCCCCceeCCCchHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 8865432 1235678999999999999987653 344454444556899999999999999999999999999999999
Q ss_pred HHHhhhhhhhccccCCCCCCCC
Q 019448 320 CYTSHVIIQRSGCTYPEKPEFN 341 (341)
Q Consensus 320 ~~~Aa~~v~~~g~~~p~~~~~~ 341 (341)
+++|+.+|++.|+++|..++++
T Consensus 346 ~~aAa~vv~~~Ga~lp~r~~~~ 367 (372)
T 3uq6_A 346 VKAAAYIICRSGFSLGSRDSYS 367 (372)
T ss_dssp HHHHHHHHTSSSSCCCCGGGCC
T ss_pred HHHHHHHHcCCCCCCCChhHHH
Confidence 9999999999999999988864
|
| >1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-53 Score=387.22 Aligned_cols=339 Identities=58% Similarity=1.032 Sum_probs=294.5
Q ss_pred CCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCC-CcE
Q 019448 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIP-GAT 81 (341)
Q Consensus 3 ~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg-~~v 81 (341)
++++|+|+|++++|++..++++++.+|++++|+..+.+..+.|..++..+..+....+||+++|+|+++++|.+.+ .++
T Consensus 5 ~~~~v~viG~~~~D~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~lgg~~~~~~ 84 (345)
T 1bx4_A 5 RENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAA 84 (345)
T ss_dssp CTTCEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHHHHSCCEEEEECHHHHHHHHHHHHHCSSTTCE
T ss_pred ccccEEEECCcceeEEEecCHHHHHHcCCCCCcEEEchHHHHHHHHHHhccCCceecCCcHHHHHHHHHHHhcCCCCCcE
Confidence 3568999999999999999999999999999999998877899999999999999999999999999999853222 899
Q ss_pred EEEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCCcc-cCCCcchhhhhccceE
Q 019448 82 SYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSE-HLKKPENWALVEKAKY 160 (341)
Q Consensus 82 ~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~ 160 (341)
.|+|.+|+|.+|+.+++.|++.||+++++...+.+|+.+++++++|+|+++.+.+++..++++ ++........+.++++
T Consensus 85 ~~ig~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~T~~~~~~~~~g~r~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 164 (345)
T 1bx4_A 85 TFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARV 164 (345)
T ss_dssp EEEEEEESSHHHHHHHHHHHHTTCEEEEEEESSSCCCEEEEEEETTEEEEEEECGGGGGCCGGGTTTSHHHHHHHHHCSE
T ss_pred EEEEEeCCChhHHHHHHHHHHcCCceeeeecCCCCCceEEEEEcCCceEeeeccchHhhcCcccccCcHHHHHHHhhCCE
Confidence 999999999999999999999999999987666789999888888888887777877788888 7764333456789999
Q ss_pred EEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHH
Q 019448 161 FYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 240 (341)
Q Consensus 161 v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~ 240 (341)
+|++++.+..+++.+..+++.++++++++++|++.+.|.....+.++++++++|++++|++|++.|++....+.++++++
T Consensus 165 v~~~g~~~~~~~~~~~~~~~~a~~~g~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~ 244 (345)
T 1bx4_A 165 CYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEI 244 (345)
T ss_dssp EEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCSHHHHHHTHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCCCHHHH
T ss_pred EEEEEEeccCCHHHHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHHHHHHhccCCEEeCCHHHHHHHhcccCCCCCCHHHH
Confidence 99999887778899999999999999999999987777655666788899999999999999999988655556789999
Q ss_pred HHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHH
Q 019448 241 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGC 320 (341)
Q Consensus 241 ~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~ 320 (341)
++++.++......|++.||||+|++|++++++++.+++|+++++..+++|||||||+|+|||+++|++|+++++|+++|+
T Consensus 245 ~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaf~ag~~~~l~~g~~~~~a~~~A~ 324 (345)
T 1bx4_A 245 AKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGH 324 (345)
T ss_dssp HHHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHhcccccccCCCEEEEEeCCCCeEEEECCeEEEEeccccCcCccccCCCcchHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 99884310000058899999999999999988888888887654457899999999999999999999999999999999
Q ss_pred HHhhhhhhhccccCCCCCCCC
Q 019448 321 YTSHVIIQRSGCTYPEKPEFN 341 (341)
Q Consensus 321 ~~Aa~~v~~~g~~~p~~~~~~ 341 (341)
++|+++|++.|+.+|.+++|.
T Consensus 325 ~~aa~~v~~~G~~~p~~~~~~ 345 (345)
T 1bx4_A 325 YAASIIIRRTGCTFPEKPDFH 345 (345)
T ss_dssp HHHHHHTTSSSSCCCSSCCCC
T ss_pred HHHHHHHhccCCCCCCcccCC
Confidence 999999999999999988873
|
| >2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-50 Score=374.80 Aligned_cols=330 Identities=32% Similarity=0.544 Sum_probs=277.9
Q ss_pred CCCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 1 ~~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
|.++++|+|+|++++|++..++++++.++++++|+..+.+.++.|..++. +.......+||+++|+|+++++|...|.+
T Consensus 29 ~~~~~~vlviG~~~lD~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~-~~~~~~~~~GG~~~NvA~~la~Lg~~g~~ 107 (383)
T 2abs_A 29 ATGPMRVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTL-DQFNPTSLPGGSALNSVRVVQKLLRKPGS 107 (383)
T ss_dssp -CCCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGGGTG-GGGCCEEEEESHHHHHHHHHHHHHCSTTS
T ss_pred CCCCceEEEECcchheeEeccCHHHHHhcCCCCCceeechhhHHHHHHhh-ccccceeeCCChHHHHHHHHHHhccCCCc
Confidence 34567999999999999999998889999999999988877778888877 77888999999999999999996544699
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccceE
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKY 160 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 160 (341)
+.|+|.+|+|.+|+.+++.|++.||+++++...+.+|+.+++++++|+|+++.+.++...+++++. ....+.++++
T Consensus 108 v~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~T~~~~~~~~~g~r~~~~~~~a~~~l~~~~~----~~~~l~~~~~ 183 (383)
T 2abs_A 108 AGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINEKERTLCTHLGACGSFRLPED----WTTFASGALI 183 (383)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCCEEEEEEEETTEEEEEEECGGGGGCCCCTT----HHHHTTTCCE
T ss_pred EEEEEEecCChhHHHHHHHHHHcCCceeeeecCCCCCeEEEEEEcCCceeEeeccChhhhCChhhh----hHHHhhcCCE
Confidence 999999999999999999999999999998766678999988888888888777777766776521 3356889999
Q ss_pred EEEeccccccCHHHHHHHHHHHHh-CCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCC------
Q 019448 161 FYIAGFFLTVSPDSIQLVAEHAAA-NNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWE------ 233 (341)
Q Consensus 161 v~i~~~~~~~~~~~~~~~~~~a~~-~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~------ 233 (341)
+|++++.+..+++.+..+++.+++ +++++++|++.+.|.....+.++++++++|++++|++|++.|++..+..
T Consensus 184 v~~~g~~~~~~~~~~~~~~~~a~~~~g~~v~~d~~~~~~~~~~~~~l~~ll~~~dil~pN~~Ea~~L~g~~~~~~~~~~~ 263 (383)
T 2abs_A 184 FYATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKTA 263 (383)
T ss_dssp EEEEGGGGTTCHHHHHHHHHHHHTSTTCEEEEECCCHHHHHHCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCC------
T ss_pred EEEeeecccCCHHHHHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHHHHHHhhCCEEeCCHHHHHHHhcccCcccccccc
Confidence 999998877788999999999999 9999999999877765566778889999999999999999998764322
Q ss_pred ------CCCHHHHHHHHhcCCccccC-CccEEEEEeCCCceEEE-----ECCeeEEEeceecCCCcccCCCCCchhhHHH
Q 019448 234 ------TDDVEEIALKLSQWPKASEI-RKRTAVITQGADPVVVA-----QDGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 301 (341)
Q Consensus 234 ------~~d~~~~~~~l~~~~~~~~~-~~~~vvvt~G~~G~~~~-----~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag 301 (341)
.++++++++.+.++.+.... |++.||||+|++|++++ .+++.+++|+++++..+++||+||||+|+||
T Consensus 264 ~s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag 343 (383)
T 2abs_A 264 LSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFVGG 343 (383)
T ss_dssp ----CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCGGGCCCCTTHHHHHHHH
T ss_pred cccccccccHHHHHHHHHhccccccccCCCEEEEEcCCCCeEEEEeecCCCCeEEEecCccCCcCCcCcCCChHHHHHHH
Confidence 23456677776320000003 78999999999999998 5566777887655444789999999999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHhhhhhhhccccCC
Q 019448 302 FLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYP 335 (341)
Q Consensus 302 ~~~~l~~g~~~~~a~~~a~~~Aa~~v~~~g~~~p 335 (341)
|+++|++|+++++|+++|+++|+++|++.|+.+|
T Consensus 344 ~~~~l~~g~~l~~al~~A~a~aa~~v~~~Ga~~p 377 (383)
T 2abs_A 344 FLYALSQGKTVKQCIMCGNACAQDVIQHVGFSLS 377 (383)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHTSSSCCCC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHhcCCccCC
Confidence 9999999999999999999999999999999877
|
| >4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-50 Score=366.16 Aligned_cols=311 Identities=25% Similarity=0.392 Sum_probs=269.3
Q ss_pred CCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEeccccc-ccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 2 AQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKH-LPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 2 ~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
|++++|+++|++++|++..++++|+.++++++|+..+.+.++ .+...+. ......+||++.|+|+++++ ||.+
T Consensus 23 m~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~li~~~~~~~l~~~~---~~~~~~~GG~~~N~A~~la~---LG~~ 96 (352)
T 4e3a_A 23 MTRFDVLTVGNAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRM---GPALEASGGSAGNTAAGVAN---LGGK 96 (352)
T ss_dssp CCSEEEEEECCCEEEEEEECCHHHHHHTTCCTTSEEECCHHHHHHHHHHS---CSCEEEECCHHHHHHHHHHH---HTCC
T ss_pred CCcccEEEECCceeeEEEecCHHHHHHcCCCCCcceEeCHHHHHHHHHHh---hhccEecCCHHHHHHHHHHH---cCCC
Confidence 346899999999999999999999999999999998876532 3333322 34578999999999999998 3599
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeeec-CCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccc
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYED-ESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKA 158 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~-~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 158 (341)
+.++|.+|+|.+|+.+++.|++.||+++++.. .+.+|+.++++++ +|+|+++.+.++...++++++.. ..++++
T Consensus 97 ~~~ig~vG~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~~~~ga~~~l~~~~~~~----~~~~~~ 172 (352)
T 4e3a_A 97 AAYFGNVAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTEDGERSMNTYLGACVELGPEDVEA----DVVADA 172 (352)
T ss_dssp EEEECCCCSSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECTTSCEEEEEECGGGGGCCGGGCCH----HHHHTE
T ss_pred eEEEEEECCChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcCCCceEEEeccChhhcCChhhCCH----HHHhhC
Confidence 99999999999999999999999999999864 4568999988887 79999988888888899988864 678999
Q ss_pred eEEEEecccc--ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC--CCcEEecCHHHHHHHhhhcCCCC
Q 019448 159 KYFYIAGFFL--TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP--YMDYIFGNETEARTFSKVQGWET 234 (341)
Q Consensus 159 ~~v~i~~~~~--~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~E~~~l~~~~~~~~ 234 (341)
+++|++++.+ ..+.+.+..+++.+++++.++++|++.+.+....++.+.++++ ++|++++|++|++.|++ .
T Consensus 173 ~~v~~~G~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~l~~ll~~~~~dil~~N~~Ea~~l~g-----~ 247 (352)
T 4e3a_A 173 KVTYFEGYLWDPPRAKEAILDCARIAHQHGREMSMTLSDSFCVDRYRGEFLDLMRSGKVDIVFANRQEALSLYQ-----T 247 (352)
T ss_dssp EEEEEEGGGGSSSSHHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHTTSCCEEEEEHHHHHHHTT-----C
T ss_pred CEEEEeeeecCCchHHHHHHHHHHHHHHcCCEEEEECCchhhHHHHHHHHHHHhcccCCcEEEeCHHHHHHHhC-----C
Confidence 9999999863 3346789999999999999999999887666667777889998 89999999999999987 3
Q ss_pred CCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHH
Q 019448 235 DDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEE 314 (341)
Q Consensus 235 ~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~ 314 (341)
++++++++.+ .. +++.+|||+|++|++++++++.+++|+++++ +++|||||||+|+|||+++|++|+++++
T Consensus 248 ~~~~~a~~~l------~~-~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~--~vvDttGAGDaF~agfl~~l~~g~~l~~ 318 (352)
T 4e3a_A 248 DDFEEALNRI------AA-DCKIAAVTMSENGAVILKGRERYYVNAIRIR--EVVDTTGAGDLFASGFLYGYTQGRSLED 318 (352)
T ss_dssp SCHHHHHHHH------HH-HSSEEEEECGGGCEEEEETTEEEEECCCCCS--CCSCCTTHHHHHHHHHHHHHHTTCCHHH
T ss_pred CCHHHHHHHH------hc-CCCEEEEEECCCceEEEECCEEEEECCccCC--CCcCCCChHHHHHHHHHHHHHcCCCHHH
Confidence 5788888887 33 5789999999999999999999999987652 4899999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhccccCCC
Q 019448 315 CVRAGCYTSHVIIQRSGCTYPE 336 (341)
Q Consensus 315 a~~~a~~~Aa~~v~~~g~~~p~ 336 (341)
|+++|+++|+.+|++.|+..|.
T Consensus 319 a~~~A~~aAa~~v~~~G~~~~~ 340 (352)
T 4e3a_A 319 CGKLGCLAAGIVIQQIGPRPMT 340 (352)
T ss_dssp HHHHHHHHHHHHTTSSSSSCSS
T ss_pred HHHHHHHHHHHHHcCCCCCCCc
Confidence 9999999999999999996443
|
| >3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-49 Score=355.35 Aligned_cols=293 Identities=21% Similarity=0.267 Sum_probs=253.5
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHh-ccCCceEecCchHHHHHHHHHHHhcCCCcEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMA-SKYNVEYIAGGATQNSIRVAQWMLQIPGATSY 83 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~ 83 (341)
++|+|+|++++|++..++ ++|.+++.. +.......+||++.|+|+++++ ||.++.+
T Consensus 3 ~~v~viG~~~~D~~~~~~--------------------~~p~~g~~~~~~~~~~~~~GG~~~NvA~~la~---lG~~~~~ 59 (304)
T 3ry7_A 3 NKVVILGSTNVDQFLTVE--------------------RYAQPGETLHVEEAQKAFGGGKGANQAIATAR---MQADTTF 59 (304)
T ss_dssp CEEEEECCCEEEEEEECS--------------------SCCCTTCCCCCSSCCEEEEECHHHHHHHHHHH---TTCEEEE
T ss_pred CcEEEEccceeEEEEecc--------------------CCCCCCCceecccceeecCCCHHHHHHHHHHH---CCCCeEE
Confidence 589999999999999887 567666666 6778899999999999999998 5699999
Q ss_pred EeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccceEE
Q 019448 84 IGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYF 161 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 161 (341)
+|.+|+|.+|+.+++.|++.||+++++. .++.+|+.++++++ +|+++++.+.+++..+++++++. ....+++++++
T Consensus 60 ~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~--~~~~~~~~~~v 137 (304)
T 3ry7_A 60 ITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMTPEDVIN--AKDAIINADFV 137 (304)
T ss_dssp ECEEESSCTTHHHHHHHHHTTCBCTTCEEESSSCCEEEEEEECSSCCEEEEEECGGGGGCCHHHHHT--THHHHHTCSEE
T ss_pred EEEeCCChHHHHHHHHHHHcCCcchhEEEcCCCCCcEEEEEECCCCCEEEEEecCchhcCCHHHHHH--HHHHhccCCEE
Confidence 9999999999999999999999999885 46678999988887 68998888888878888887754 33568899999
Q ss_pred EEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHH
Q 019448 162 YIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIA 241 (341)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~ 241 (341)
++++ ..+.+.+..+++.+++++.++++|+.... +...++++++|++++|++|++.|++....+.++.++++
T Consensus 138 ~~~~---~~~~~~~~~~~~~a~~~~~~v~~D~~~~~------~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~ 208 (304)
T 3ry7_A 138 VAQL---EVPIPAIISAFEIAKAHGVTTVLNPAPAK------ALPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNA 208 (304)
T ss_dssp EEET---TSCHHHHHHHHHHHHHTTCEEEEECCSCC------CCCHHHHTTCSEECCBHHHHHHHHSCCCCSHHHHHHHH
T ss_pred EEcC---CCCHHHHHHHHHHHHHcCCEEEEeCCccc------cccHHHHHhCCEEecCHHHHHHHhCCCCCChhHHHHHH
Confidence 9975 45788999999999999999999997531 23567889999999999999999986443334667788
Q ss_pred HHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcC-CCHHHHHHHHH
Q 019448 242 LKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE-KPIEECVRAGC 320 (341)
Q Consensus 242 ~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g-~~~~~a~~~a~ 320 (341)
+++ .+.+++.+|||+|++|++++++++.+++|++++ +++|++||||+|+|||+++|++| +++++|+++|+
T Consensus 209 ~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vdttGAGDaf~a~~~~~l~~g~~~~~~a~~~A~ 279 (304)
T 3ry7_A 209 NYF------LSIGIKTVLITLGKQGTYFATKNQSQHIEAYKV---NAIDTTAAGDTFIGAFVSRLNKSQDNLADAIDFGN 279 (304)
T ss_dssp HHH------HHTTCCEEEEECGGGCEEEECSSCEEEECCSSC---CSSCCSSHHHHHHHHHHHHCCTTCTTHHHHHHHHH
T ss_pred HHH------HHcCCCEEEEEeCCCceEEEECCeeEEecCCCc---ccCCCCCchHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 888 667889999999999999998888899988765 78999999999999999999999 99999999999
Q ss_pred HHhhhhhhhccc--cCCCCCCC
Q 019448 321 YTSHVIIQRSGC--TYPEKPEF 340 (341)
Q Consensus 321 ~~Aa~~v~~~g~--~~p~~~~~ 340 (341)
++|+++|++.|+ .+|+.+|+
T Consensus 280 ~~aa~~~~~~G~~~~~p~~~ev 301 (304)
T 3ry7_A 280 KASSLTVQKHGAQASIPLLEEV 301 (304)
T ss_dssp HHHHTTSCCCCTGGGCCCHHHH
T ss_pred HHHHHHhCCCCccccCCCHHHH
Confidence 999999999999 46887654
|
| >1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-48 Score=349.26 Aligned_cols=297 Identities=23% Similarity=0.334 Sum_probs=248.4
Q ss_pred CCCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 1 ~~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
|+++++|+|+|++++|++..++ ++|..++..+.......+||++.|+|+++++ ||.+
T Consensus 1 m~~~~~v~viG~~~iD~~~~~~--------------------~~p~~g~~~~~~~~~~~~GG~~~N~A~~la~---lG~~ 57 (309)
T 1rkd_A 1 MQNAGSLVVLGSINADHILNLQ--------------------SFPTPGETVTGNHYQVAFGGKGANQAVAAGR---SGAN 57 (309)
T ss_dssp ---CCEEEEECCCEEEEEEECS--------------------SCCCTTCCCCCCCEEEEEECHHHHHHHHHHH---HTCE
T ss_pred CCCCCeEEEECcceEeEEEecC--------------------CCCCCCCeeecCceeecCCCHHHHHHHHHHh---CCCc
Confidence 7778899999999999999887 5566666666677888999999999999998 3599
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccc
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKA 158 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 158 (341)
+.++|.+|+|.+|+.+++.|++.||+++++. .++.+|+.++++++ +|+++++.+.+++..++++++.. ....+.++
T Consensus 58 ~~~~~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~ 135 (309)
T 1rkd_A 58 IAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEA--QRERIANA 135 (309)
T ss_dssp EEEEEEEESSTTHHHHHHHHHTTTEECTTEEEETTCCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHT--THHHHHHC
T ss_pred eEEEEEECCCHHHHHHHHHHHHcCCCccceEecCCCCCceEEEEECCCCCeEEEEeCCchhcCCHHHHHH--HHHhcccC
Confidence 9999999999999999999999999999875 45668999988887 58888877777777788777653 23467889
Q ss_pred eEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHH
Q 019448 159 KYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVE 238 (341)
Q Consensus 159 ~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~ 238 (341)
+++++++ ..+.+.+..+++.+++++.++++|+.... +...++++++|++++|++|++.|++....+.+++.
T Consensus 136 ~~v~~~~---~~~~~~~~~~~~~a~~~g~~v~~D~~~~~------~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~ 206 (309)
T 1rkd_A 136 SALLMQL---ESPLESVMAAAKIAHQNKTIVALNPAPAR------ELPDELLALVDIITPNETEAEKLTGIRVENDEDAA 206 (309)
T ss_dssp SEEEECS---SSCHHHHHHHHHHHHHTTCEEEECCCSCC------CCCHHHHTTCSEECCCHHHHHHHHSCCCSSHHHHH
T ss_pred CEEEEeC---CCCHHHHHHHHHHHHHcCCEEEEECCccc------cchHHHHhhCCEEEcCHHHHHHHhCCCCCCHHHHH
Confidence 9999975 45678889999999999999999997531 11346789999999999999999875332224566
Q ss_pred HHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHH
Q 019448 239 EIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRA 318 (341)
Q Consensus 239 ~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~ 318 (341)
++++++ .+.|++.||||+|++|++++++++.+++|++++ +++||+||||+|+|+|+++|++|+++++|+++
T Consensus 207 ~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vdt~GAGD~f~a~~~~~l~~g~~~~~a~~~ 277 (309)
T 1rkd_A 207 KAAQVL------HEKGIRTVLITLGSRGVWASVNGEGQRVPGFRV---QAVDTIAAGDTFNGALITALLEEKPLPEAIRF 277 (309)
T ss_dssp HHHHHH------HHTTCSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHH------HHhCCCEEEEEECCCcEEEEeCCceEEcCCCCC---CcCCCCChHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 777777 567889999999999999998888888887654 78999999999999999999999999999999
Q ss_pred HHHHhhhhhhhccc--cCCCCCCC
Q 019448 319 GCYTSHVIIQRSGC--TYPEKPEF 340 (341)
Q Consensus 319 a~~~Aa~~v~~~g~--~~p~~~~~ 340 (341)
|+++|++++++.|+ .+|+.+|+
T Consensus 278 a~~~aa~~~~~~G~~~~~p~~~ev 301 (309)
T 1rkd_A 278 AHAAAAIAVTRKGAQPSVPWREEI 301 (309)
T ss_dssp HHHHHHHHHTSSSSGGGCCCHHHH
T ss_pred HHHHHHHHcCCCCccCCCCCHHHH
Confidence 99999999999998 47876653
|
| >2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-47 Score=347.93 Aligned_cols=298 Identities=24% Similarity=0.309 Sum_probs=247.9
Q ss_pred CCCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 1 ~~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
|+++++|+|+|++++|++..++ ++|.+++..+.......+||+++|+|+++++ ||.+
T Consensus 21 m~~~~~vlviG~~~iD~~~~~~--------------------~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~---LG~~ 77 (331)
T 2fv7_A 21 QEEVAAVVVVGSCMTDLVSLTS--------------------RLPKTGETIHGHKFFIGFGGKGANQCVQAAR---LGAM 77 (331)
T ss_dssp ---CCSEEEECCCEEEEEEECS--------------------SCCCTTCCCCCSEEEEEEECHHHHHHHHHHH---TTCC
T ss_pred ccccCCEEEECcccEEEEEecC--------------------CCCCCCceEecCceEECcCCHHHHHHHHHHH---CCCC
Confidence 6667799999999999999887 5566666556667788999999999999998 4699
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeeec-CCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccc
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYED-ESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKA 158 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~-~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 158 (341)
+.++|.+|+|.+|+.+++.|++.||+++++.. ++.+|+.++++++ +|+|+++.+.+++..++++++.. ....+.++
T Consensus 78 ~~~i~~vG~D~~G~~l~~~L~~~Gv~~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~l~~~~~~~--~~~~l~~~ 155 (331)
T 2fv7_A 78 TSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRA--AANVISRA 155 (331)
T ss_dssp EEEEEEEESSHHHHHHHHHHHTTTEECTTEEEESSSCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHH--THHHHHHC
T ss_pred eEEEEEECCChhHHHHHHHHHHcCCcceeeEecCCCCCceEEEEECCCCCeEEEecCCccccCCHHHHHH--HHHhhccC
Confidence 99999999999999999999999999998754 5678999988887 58888888777776777776642 22457889
Q ss_pred eEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHH
Q 019448 159 KYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVE 238 (341)
Q Consensus 159 ~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~ 238 (341)
+++++++ ..+.+.+..+++.+++++.++++||.... .....++++++|++++|++|++.|++....+.++++
T Consensus 156 ~~v~~~~---~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~-----~~~~~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~ 227 (331)
T 2fv7_A 156 KVMVCQL---EITPATSLEALTMARRSGVKTLFNPAPAI-----ADLDPQFYTLSDVFCCNESEAEILTGLTVGSAADAG 227 (331)
T ss_dssp SEEEECS---SSCHHHHHHHHHHHHHTTCEEEECCCSCC-----TTCCTHHHHTCSEEEEEHHHHHHHHSSCCCSHHHHH
T ss_pred CEEEEec---CCCHHHHHHHHHHHHHcCCEEEEeCCccc-----ccchHHHHhcCCEEEeCHHHHHHHhCCCCCChhHHH
Confidence 9999975 35678889999999999999999997531 111346788999999999999999875432334566
Q ss_pred HHHHHHhcCCccccCCccEEEEEeCCCceEEEECC--eeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcC--CCHHH
Q 019448 239 EIALKLSQWPKASEIRKRTAVITQGADPVVVAQDG--KLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE--KPIEE 314 (341)
Q Consensus 239 ~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~--~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g--~~~~~ 314 (341)
++++++ .+.|++.||||+|++|+++++++ +.+++|++++ +++||+||||+|+|||+++|++| +++++
T Consensus 228 ~~~~~l------~~~g~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~~~~~ 298 (331)
T 2fv7_A 228 EAALVL------LKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKV---KAVDTTGAGDSFVGALAFYLAYYPNLSLED 298 (331)
T ss_dssp HHHHHH------HTTTCSEEEEECGGGCEEEEESSCCSCEEECCCCC---CCSCCTTHHHHHHHHHHHHHHHCTTSCHHH
T ss_pred HHHHHH------HHcCCCEEEEEECCCceEEEECCCCceeEecCCCC---ccCCCCCchHHHHHHHHHHHHhCCCCCHHH
Confidence 778887 56789999999999999998877 7788887654 78999999999999999999999 99999
Q ss_pred HHHHHHHHhhhhhhhccc--cCCCCCCC
Q 019448 315 CVRAGCYTSHVIIQRSGC--TYPEKPEF 340 (341)
Q Consensus 315 a~~~a~~~Aa~~v~~~g~--~~p~~~~~ 340 (341)
|+++|+++|+.+|++.|+ .+|+.+|+
T Consensus 299 a~~~A~~~aa~~v~~~G~~~~~p~~~ev 326 (331)
T 2fv7_A 299 MLNRSNFIAAVSVQAAGTQSSYPYKKDL 326 (331)
T ss_dssp HHHHHHHHHHHHHTSSSGGGGCCCGGGS
T ss_pred HHHHHHHHHHHHhCCCCCccCCCCHHHH
Confidence 999999999999999998 67888876
|
| >3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-47 Score=342.84 Aligned_cols=290 Identities=21% Similarity=0.305 Sum_probs=234.5
Q ss_pred CCCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCC--
Q 019448 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIP-- 78 (341)
Q Consensus 1 ~~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg-- 78 (341)
|+|+++|+|+|++++|++... ......+||+++|+|+++++ ||
T Consensus 1 m~m~~~i~viG~~~~D~~~~~--------------------------------~~~~~~~GG~~~NvA~~la~---LG~~ 45 (319)
T 3lhx_A 1 MSLSKKIAVIGECMIELSEKG--------------------------------ADVKRGFGGDTLNTSVYIAR---QVDP 45 (319)
T ss_dssp ---CEEEEEESCCEEEEEC-----------------------------------CCEEEEECHHHHHHHHHHT---TSCT
T ss_pred CCccCceeeechhhhhhccCC--------------------------------CceEEecCChHHHHHHHHHH---cCCC
Confidence 888889999999999997632 24578999999999999997 56
Q ss_pred --CcEEEEeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeeccccc---ccCCcccCCCcch
Q 019448 79 --GATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAA---NCYKSEHLKKPEN 151 (341)
Q Consensus 79 --~~v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~---~~~~~~~~~~~~~ 151 (341)
.++.++|.+|+|.+|+.+++.|++.||+++++. .++.+|+.+++.++ +|+|+++.+.+.. ..++++++.. .
T Consensus 46 ~~~~~~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~--~ 123 (319)
T 3lhx_A 46 AALTVHYVTALGTDSFSQQMLDAWHGENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASEQSAA--I 123 (319)
T ss_dssp TTEEEEEECEECSSHHHHHHHHHHHTTTEECTTCEECTTCCCCEEEEEC----CCEEEEECTTCGGGGTTSSSSHHH--H
T ss_pred CCCcEEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEeCCCCCeeEEEecCCCHHHhccCccchhh--H
Confidence 899999999999999999999999999999875 44567888887776 7899887765532 2344444321 3
Q ss_pred hhhhccceEEEEeccccc-c---CHHHHHHHHHHHHhCCCeEEEeCCch--hHH--HHHHHHHHhhcCCCcEEecCHHHH
Q 019448 152 WALVEKAKYFYIAGFFLT-V---SPDSIQLVAEHAAANNKVFMMNLSAP--FIC--EFFKDALEKVLPYMDYIFGNETEA 223 (341)
Q Consensus 152 ~~~l~~~~~v~i~~~~~~-~---~~~~~~~~~~~a~~~~~~v~~d~~~~--~~~--~~~~~~~~~~l~~~dvl~~n~~E~ 223 (341)
...++++|++|++++.+. + +.+.+.++++.+++++.++++||... .|. ....+.++++++++|++++|++|+
T Consensus 124 ~~~l~~~~~v~~~g~~~~~l~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~di~~~n~~E~ 203 (319)
T 3lhx_A 124 CEELANFDYLYLSGISLAILSPTSREKLLSLLRECRAKGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDE 203 (319)
T ss_dssp HHHHTTCSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEEEHHHH
T ss_pred HHHhcCCCEEEEcCchhhhcCchhHHHHHHHHHHHHhcCCEEEEeCcCCcccccCHHHHHHHHHHHHhhCCcccCCHHHH
Confidence 457899999999987643 2 34678899999999999999999632 222 234566788999999999999999
Q ss_pred HHHhhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeE-EEeceecCCCcccCCCCCchhhHHHH
Q 019448 224 RTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLK-KFPVIVLPKDKLVDTNGAGDAFVGGF 302 (341)
Q Consensus 224 ~~l~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~-~~~~~~~~~~~~vd~tGAGDaf~ag~ 302 (341)
+.+++. ++++++++++ .+.|++.||||+|++|++++++++.+ ++|+++++.++++||+||||+|+|||
T Consensus 204 ~~l~g~-----~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~ 272 (319)
T 3lhx_A 204 DALWGQ-----QPVEDVIART------HNAGVKEVVVKRGADSCLVSIAGEALVDVPAVKLPKEKVIDTTAAGDSFSAGY 272 (319)
T ss_dssp HHHHCC-----CCHHHHHHHH------HHTTCSEEEEEETTEEEEEEETTSCCEEECCCCCCGGGCCCCTTHHHHHHHHH
T ss_pred HHHhCC-----CCHHHHHHHH------HhcCCCEEEEEECCCCeEEEECCcceEEcccccCCCCccCCCCCccHHHHHHH
Confidence 999873 5788999998 66789999999999999999887654 88876444458999999999999999
Q ss_pred HHHHhcCCCHHHHHHHHHHHhhhhhhhccccCCCCC
Q 019448 303 LSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKP 338 (341)
Q Consensus 303 ~~~l~~g~~~~~a~~~a~~~Aa~~v~~~g~~~p~~~ 338 (341)
+++|++|+++++|+++|+++|+.+|++.|+.+|...
T Consensus 273 ~~~l~~g~~~~~a~~~A~~~aa~~v~~~Ga~~~~~~ 308 (319)
T 3lhx_A 273 LAVRLTGGSAENAAKRGHLTASTVIQYRGAIIPREA 308 (319)
T ss_dssp HHHHTTTCCHHHHHHHHHHHHHHHTTSSSSSCCGGG
T ss_pred HHHHHcCCCHHHHHHHHHHHHHhhhccCCCcCCCCC
Confidence 999999999999999999999999999999887654
|
| >4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-47 Score=343.55 Aligned_cols=294 Identities=18% Similarity=0.248 Sum_probs=233.4
Q ss_pred CCCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 1 ~~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
|.++++|+|+|++++|++...+ ++..+.......+||++.|+|+++++ ||.+
T Consensus 23 m~~~~~vlviG~~~iD~~~~~~-------------------------g~~~~~~~~~~~~GG~~~NvA~~la~---LG~~ 74 (336)
T 4du5_A 23 MTSALDVITFGEAMMLLVADRP-------------------------GPLEHAEAFHKRTAGAETNVAIGLAR---LGLK 74 (336)
T ss_dssp ---CEEEEEECCCEEEEEESSS-------------------------SCGGGCCEEEEEEECHHHHHHHHHHH---TTCC
T ss_pred cCCCCCEEEEChhhhhccCCCC-------------------------CccchhhheeecCCCHHHHHHHHHHh---CCCc
Confidence 6667899999999999997543 23445667788999999999999998 4699
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceee---cccccccCCcccCCCcchhhhh
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVA---NLSAANCYKSEHLKKPENWALV 155 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~l 155 (341)
+.++|.+|+|.+|+.+++.|++.||+++++. .++.+|+.+++..+ +|+++.+. ..++...++++++.. ..+
T Consensus 75 ~~~ig~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~~~~~~~----~~l 150 (336)
T 4du5_A 75 VGWASRLGTDSMGRYLLAAMAAEGIDCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDE----AWL 150 (336)
T ss_dssp EEEEEEECSSHHHHHHHHHHHTTTCEEEEEEECTTSCCCEEEECCCSCC--CCEEEECTTCTGGGCCGGGCCH----HHH
T ss_pred EEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCcEEEEEEEcCCCCcceEEEECCCChhHhCChhhCCH----hHh
Confidence 9999999999999999999999999999885 45567888877776 57555442 235667788887763 568
Q ss_pred ccceEEEEeccccccC---HHHHHHHHHHHHhCCCeEEEeCCc--hhHH--HHHHHHHHhhcCCCcEEecCHHHHHHHhh
Q 019448 156 EKAKYFYIAGFFLTVS---PDSIQLVAEHAAANNKVFMMNLSA--PFIC--EFFKDALEKVLPYMDYIFGNETEARTFSK 228 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~---~~~~~~~~~~a~~~~~~v~~d~~~--~~~~--~~~~~~~~~~l~~~dvl~~n~~E~~~l~~ 228 (341)
+++++++++++.+..+ .+.+..+++.+++++.++++||.. ..|. ....+.++++++++|++++|++|++.|++
T Consensus 151 ~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~Ea~~l~g 230 (336)
T 4du5_A 151 LSARHLHATGVFPAISATTLPAARKTMDLMRAAGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTG 230 (336)
T ss_dssp TTEEEEEEESSGGGSCTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSSHHHHHHHHHHHHTTCSEECCBHHHHHHHHC
T ss_pred ccCCEEEEcCchhhCChHHHHHHHHHHHHHHHCCCEEEEeCcCCchhcCChHHHHHHHHHHHHhCCEEECCHHHHHHHhC
Confidence 8999999999765333 367789999999999999999962 2222 22356678899999999999999999987
Q ss_pred hcCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCc-ccCCCCCchhhHHHHHHHHh
Q 019448 229 VQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDK-LVDTNGAGDAFVGGFLSQLV 307 (341)
Q Consensus 229 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~-~vd~tGAGDaf~ag~~~~l~ 307 (341)
.++++++++.+ .+.|++.||||+|++|++++++++.+++|++++ + ++||+||||+|+|||+++|+
T Consensus 231 -----~~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vvdttGAGDaf~a~~~~~l~ 296 (336)
T 4du5_A 231 -----ETTPEGVARFY------RQLGAKLVVVKLGAEGAYFDGEAGSGRVAGFPV---AEVVDTVGAGDGFAVGVISALL 296 (336)
T ss_dssp -----CCSHHHHHHHH------HHTTCSEEEEECGGGCEEEEETTEEEEECCCCC----------CHHHHHHHHHHHHHH
T ss_pred -----CCCHHHHHHHH------HhcCCCEEEEEecCCceEEEECCeEEEeCCccC---CCCCCCccchHHHHHHHHHHHH
Confidence 35788999988 667899999999999999999999899988765 5 89999999999999999999
Q ss_pred cCCCHHHHHHHHHHHhhhhhhhcccc--CCCCCCC
Q 019448 308 QEKPIEECVRAGCYTSHVIIQRSGCT--YPEKPEF 340 (341)
Q Consensus 308 ~g~~~~~a~~~a~~~Aa~~v~~~g~~--~p~~~~~ 340 (341)
+|+++++|+++|+++|+++|++.|+. +|+.+|+
T Consensus 297 ~g~~l~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 331 (336)
T 4du5_A 297 DGLGVPEAVKRGAWIGARAVQVLGDSEGLPTRAEL 331 (336)
T ss_dssp TTCCHHHHHHHHHHHHHHHHC------CCCCHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHhccCCCccCCCCHHHH
Confidence 99999999999999999999999984 8887664
|
| >3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-47 Score=348.05 Aligned_cols=296 Identities=23% Similarity=0.256 Sum_probs=230.4
Q ss_pred CCCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 1 ~~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
|+++++|+|+|++++|++...+ +.|.. .......+||+++|+|+++++ ||.+
T Consensus 1 M~~~~~v~viG~~~iD~~~~~~--------------------~~~~~-----~~~~~~~~GG~~~NvA~~la~---LG~~ 52 (338)
T 3ljs_A 1 MSLKKTILCFGEALIDMLAQPL--------------------VKKGM-----PRAFLQCAGGAPANVAVAVAR---LGGA 52 (338)
T ss_dssp ---CCEEEEESCCEEEEEECCC--------------------SSTTS-----CCCEEEEEECHHHHHHHHHHH---HTCC
T ss_pred CCCCCCEEEEChhhhheeccCC--------------------CCccc-----hhceeecCCChHHHHHHHHHh---CCCC
Confidence 8999999999999999998776 22221 467788999999999999998 3599
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecc--cccccCCcccCCCcchhhhhc
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKKPENWALVE 156 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~ 156 (341)
+.++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++.++ +|+|++..+. +++..++++++.. ..+.
T Consensus 53 ~~~ig~vG~D~~g~~l~~~l~~~gV~~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~----~~~~ 128 (338)
T 3ljs_A 53 VQFVGMLGSDMFGDFLFDSFAEAGVVTDGIVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQD----ASFS 128 (338)
T ss_dssp EEEESEEESSHHHHHHHHHHHHHTCBCTTCEEESSSCCCEEEEECCSTTCCEEEEECSSCGGGGCCGGGCCH----HHHH
T ss_pred EEEEeeccCCHHHHHHHHHHHHcCCCceeEEEcCCCCceEEEEEECCCCCeEEEEeCCCChhHhCCHhhcCH----hHhc
Confidence 9999999999999999999999999999875 46678999988876 6888875543 5666788888763 5688
Q ss_pred cceEEEEecccc--ccCHHHHHHHHHHHHhCCCeEEEeCCch--hHH--HHHHHHHHhhcCCCcEEecCHHHHHHHhhhc
Q 019448 157 KAKYFYIAGFFL--TVSPDSIQLVAEHAAANNKVFMMNLSAP--FIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQ 230 (341)
Q Consensus 157 ~~~~v~i~~~~~--~~~~~~~~~~~~~a~~~~~~v~~d~~~~--~~~--~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~ 230 (341)
+++++|++++.+ ..+.+.+..+++.+++++.++++||... .|. ....+.++++++++|++++|++|++.|++..
T Consensus 129 ~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~ 208 (338)
T 3ljs_A 129 DALIFHACSNSMTDADIAEVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANTL 208 (338)
T ss_dssp TEEEEEEEGGGGSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCTTCCTHHHHHHHHHTCSEEEEEHHHHHHHHHHH
T ss_pred CCCEEEECChHhcCchHHHHHHHHHHHHHHcCCEEEEECCCChhhcCCHHHHHHHHHHHHhhCCEEEecHHHHHHHhCCC
Confidence 999999998764 2345788999999999999999999532 221 1135667889999999999999999998853
Q ss_pred CCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcC-
Q 019448 231 GWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE- 309 (341)
Q Consensus 231 ~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g- 309 (341)
.. +.+++++.+ .+.|++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|
T Consensus 209 ~~---~~~~~~~~l------~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~a~~~~~l~~g~ 276 (338)
T 3ljs_A 209 AA---DANAVIQQL------WQGRAQLLLVTDAAGPVHWYTRTAGGEVPTFRV---QVQDSNAAGDAFVGGMLYTFAQQF 276 (338)
T ss_dssp TS---CHHHHHHHH------TTTTCCEEEEEETTEEEEEEESSCEEEECC--------------CHHHHHHHHHHHHHHC
T ss_pred Ch---hHHHHHHHH------HhcCCCEEEEeeCCCceEEEECCceEEeCCCCC---ccCCCCCccHHHHHHHHHHHHhCC
Confidence 21 223478888 667899999999999999999988899998765 88999999999999999999999
Q ss_pred -------------CCHHHHHHHHHHHhhhhhhhccc--cCCCCCCC
Q 019448 310 -------------KPIEECVRAGCYTSHVIIQRSGC--TYPEKPEF 340 (341)
Q Consensus 310 -------------~~~~~a~~~a~~~Aa~~v~~~g~--~~p~~~~~ 340 (341)
+++++|+++|+++|+++|++.|+ .+|+.+|+
T Consensus 277 ~~~~~~~~~~~~~~~l~~al~~A~~~aa~~v~~~Ga~~~~p~~~ev 322 (338)
T 3ljs_A 277 DDAAALIDFCHDPESIVSTLRFAAAVGALAVTRQGAFTAMPMLSEV 322 (338)
T ss_dssp SSTHHHHHHHTCHHHHHHHHHHHHHHHGGGC----CCCCTTHHHHH
T ss_pred CcccchhccccChHHHHHHHHHHHHHHHHHhCCCCCCCCCCCHHHH
Confidence 89999999999999999999998 56776553
|
| >2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-46 Score=344.05 Aligned_cols=286 Identities=18% Similarity=0.184 Sum_probs=243.2
Q ss_pred CceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEE
Q 019448 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~ 83 (341)
+++|+++|++++|++..++ ++|..++..+.......+||+++|+|+++++ ||.++.+
T Consensus 29 ~~~i~viG~~~iD~~~~~~--------------------~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~ 85 (343)
T 2rbc_A 29 GKHVLCVGAAVLDTLFRVA--------------------DMPKGEGKVLPYEVLQIAEGMASSAAYAVHR---MGGRASL 85 (343)
T ss_dssp CCEEEEESCCEEEEEEECS--------------------SCCCSSSCCCCSEEEEEEECHHHHHHHHHHH---TTCEEEE
T ss_pred CCeEEEECcceEEEEeecC--------------------CCCCCCCeEeeeeeEEcCCcHHHHHHHHHHH---cCCceEE
Confidence 4589999999999999887 4455455555667788999999999999998 4699999
Q ss_pred EeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccceEE
Q 019448 84 IGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYF 161 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 161 (341)
+|.+|+|.+|+.+++.|++.||+++++. .++.+|+.++++++ +|+|+++.+.+++..++++++. ...+.+++++
T Consensus 86 i~~vG~D~~G~~i~~~L~~~GVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~~~~~~~~l~----~~~l~~~~~v 161 (343)
T 2rbc_A 86 WGAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHRLHEKKRACT----PEDIALFDAV 161 (343)
T ss_dssp ECEEESSHHHHHHHHHHHHTTEECTTCEEETTCCCEEEEEEECTTSCEEEEEECCGGGGSSCCCCC----HHHHTTCSEE
T ss_pred EEEeCCCHHHHHHHHHHHHcCCceeeEEEcCCCCCceEEEEECCCCCEEEEEcCCCcccCChhHhc----HhhhCCCCEE
Confidence 9999999999999999999999999875 45668999888887 6888887677766667776664 2467899999
Q ss_pred EEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHh-hcCCCcEEecCHHHHHHHhhhcCCCCCCHHHH
Q 019448 162 YIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEK-VLPYMDYIFGNETEARTFSKVQGWETDDVEEI 240 (341)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~-~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~ 240 (341)
|++++. ++.+..+++.+++.+.++++||... .+.+.+ +++++|++++|++|++.|++. ++++++
T Consensus 162 ~~~~~~----~~~~~~~~~~a~~~g~~v~~Dp~~~------~~~~~~~ll~~~dil~~N~~Ea~~l~g~-----~~~~~~ 226 (343)
T 2rbc_A 162 LVDVRW----PELALDVLTVARALGKPAILDGDVA------PVETLEGLAPAATHIVFSEPAATRLTGL-----ETVKDM 226 (343)
T ss_dssp EECSSS----HHHHHHHHHHHHHTTCCEEEEECSC------CHHHHHHHGGGCSEEEEEHHHHHHHHCC-----SSHHHH
T ss_pred EEcCCC----HHHHHHHHHHHHHCCCEEEEECCcc------ccccHHHHHhcCCEEEeCHHHHHHHcCC-----CCHHHH
Confidence 998743 5678899999999999999999752 234666 899999999999999999873 478888
Q ss_pred HHHHhcCCccccCCc-cEEEEEeCCCceEEEECC--eeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHH
Q 019448 241 ALKLSQWPKASEIRK-RTAVITQGADPVVVAQDG--KLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVR 317 (341)
Q Consensus 241 ~~~l~~~~~~~~~~~-~~vvvt~G~~G~~~~~~~--~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~ 317 (341)
++.+ .+.|+ +.||||+|++|+++++++ +.+++|++++ +++||+||||+|+|||+++|++|+++++|++
T Consensus 227 ~~~l------~~~g~~~~VvvT~G~~G~~~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~~~~l~~g~~~~~a~~ 297 (343)
T 2rbc_A 227 LPVL------HARYPQTFIAVTAGPAGCWWTEADDPTVHFQTTMQV---EAVDTLAAGDIFHGTFALAMAEGMQSRAAVR 297 (343)
T ss_dssp HHHH------HHHSTTSEEEEECGGGCEEEECTTCCCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHH------HHhCCCceEEEEECCcceEEEeCCCceeEEecCCCC---ccccCCChHHHHHHHHHHHHHcCCCHHHHHH
Confidence 8888 56788 899999999999999877 7888887654 7999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhcccc--CCCCCCC
Q 019448 318 AGCYTSHVIIQRSGCT--YPEKPEF 340 (341)
Q Consensus 318 ~a~~~Aa~~v~~~g~~--~p~~~~~ 340 (341)
+|+++|+++|++.|+. +|+.+|+
T Consensus 298 ~A~~~aa~~v~~~G~~~~~p~~~ev 322 (343)
T 2rbc_A 298 LSSVAAALKCTVFGGRIGAPTREET 322 (343)
T ss_dssp HHHHHHHHHHTSSSGGGGCCCHHHH
T ss_pred HHHHHHHHHhCCCCCccCCCCHHHH
Confidence 9999999999999984 7876653
|
| >3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-47 Score=344.44 Aligned_cols=295 Identities=18% Similarity=0.194 Sum_probs=236.8
Q ss_pred CCCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 1 ~~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
||| ++|+|+|++++|++...+. .+..........++||+++|+|+++++ ||.+
T Consensus 1 m~m-~~i~viG~~~~D~~~~~~~-----------------------~~~~~~~~~~~~~~GG~~~NvA~~la~---LG~~ 53 (330)
T 3iq0_A 1 MSL-SKVFTIGEILVEIMASKIG-----------------------QPFDQPGIWNGPYPSGAPAIFIDQVTR---LGVP 53 (330)
T ss_dssp ----CEEEEESCCEEEEEEEEET-----------------------CCSSSCEEEEEEEEECHHHHHHHHHHH---TTCC
T ss_pred CCC-CCEEEEcceeEEEeccCCC-----------------------CCccccccccCcCCCCHHHHHHHHHHH---CCCc
Confidence 655 6899999999999975321 000001112356889999999999998 4699
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceee-cc-cccccCCcccCCCcchhhhhc
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVA-NL-SAANCYKSEHLKKPENWALVE 156 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~-~~-~~~~~~~~~~~~~~~~~~~l~ 156 (341)
+.++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++.++ +|+|++.. .. ++...++++++.. ..+.
T Consensus 54 ~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~i~~~~~g~~~~~~~~~~~a~~~~~~~~~~~----~~~~ 129 (330)
T 3iq0_A 54 CGIISCVGNDGFGDINIHRLAADGVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDE----NILK 129 (330)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCEEEEEEECC---CEEEEECTTSGGGGCCGGGCCG----GGGT
T ss_pred EEEEEEeCCChHHHHHHHHHHHcCCCeeeEEEcCCCCceEEEEEECCCCCeeEEEeccCChhhhCCHhhCCH----hHhc
Confidence 9999999999999999999999999999885 56678999888776 68884433 22 3555677877764 4688
Q ss_pred cceEEEEecccc--ccCHHHHHHHHHHHHhCCCeEEEeCCch--hHH-HHHHHHHHhhcCCCcEEecCHHHHHHHhhhcC
Q 019448 157 KAKYFYIAGFFL--TVSPDSIQLVAEHAAANNKVFMMNLSAP--FIC-EFFKDALEKVLPYMDYIFGNETEARTFSKVQG 231 (341)
Q Consensus 157 ~~~~v~i~~~~~--~~~~~~~~~~~~~a~~~~~~v~~d~~~~--~~~-~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~ 231 (341)
+++++|++++.+ ..+.+.+..+++.+++++.++++||... .|. ....+.++++++++|++++|++|++.|++.
T Consensus 130 ~~~~v~~sg~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~-- 207 (330)
T 3iq0_A 130 DCTHFHIMGSSLFSFHMVDAVKKAVTIVKANGGVISFDPNIRKEMLDIPEMRDALHFVLELTDIYMPSEGEVLLLSPH-- 207 (330)
T ss_dssp TEEEEEEEGGGCSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGGGSHHHHHHHHHHHHTCSEECCBGGGTTTTCSC--
T ss_pred cCCEEEEechhhcCcchHHHHHHHHHHHHHcCCEEEEcCCCCccccCcHHHHHHHHHHHhhCCEEecCHHHHHHHhCC--
Confidence 999999999865 2234678899999999999999999653 232 235566788999999999999999998763
Q ss_pred CCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCC
Q 019448 232 WETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKP 311 (341)
Q Consensus 232 ~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~ 311 (341)
.+++++++.+ .+.|++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|++
T Consensus 208 ---~~~~~~~~~l------~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~ 275 (330)
T 3iq0_A 208 ---STPERAIAGF------LEEGVKEVIVKRGNQGASYYSANEQFHVESYPV---EEVDPTGAGDCFGGAWIACRQLGFD 275 (330)
T ss_dssp ---SSHHHHHHHH------HHHTCSEEEEECGGGCEEEECSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCC
T ss_pred ---CCHHHHHHHH------HHcCCCEEEEEeCCCceEEEECCceEEecCCCC---ccCCCCChHHHHHHHHHHHHHcCCC
Confidence 5788899988 567899999999999999998888889988765 8999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhccc--cCCCCCCC
Q 019448 312 IEECVRAGCYTSHVIIQRSGC--TYPEKPEF 340 (341)
Q Consensus 312 ~~~a~~~a~~~Aa~~v~~~g~--~~p~~~~~ 340 (341)
+++|+++|+++|+++|++.|+ .+|+.+|+
T Consensus 276 ~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 306 (330)
T 3iq0_A 276 AHRALQYANACGALAVTRRGPMEGTSRLMEI 306 (330)
T ss_dssp HHHHHHHHHHHHHHHTTSCSSSTTCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHcCcCCCCCCCCHHHH
Confidence 999999999999999999999 66776653
|
| >3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-46 Score=344.99 Aligned_cols=296 Identities=16% Similarity=0.189 Sum_probs=240.4
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i 84 (341)
++|+|+|++++|++... +++..+..+....+||++.|+|++|++ ||.++.++
T Consensus 3 ~~v~viG~~~~D~~~~~-------------------------~~~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~i 54 (346)
T 3ktn_A 3 LKIAAFGEVMLRFTPPE-------------------------YLMLEQTEQLRMNFVGTGVNLLANLAH---FQLETALI 54 (346)
T ss_dssp CEEEEECCCEEEEECST-------------------------TCCTTTCSCCEEEEECHHHHHHHHHHH---TTCEEEEE
T ss_pred CcEEEeChhhhhhcCCC-------------------------CCcccccceeEEeccCHHHHHHHHHHH---cCCCeEEE
Confidence 57999999999998522 223445677889999999999999998 46999999
Q ss_pred eeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCC-ccceeec----ccccccCCcccCCCcchhhhhccce
Q 019448 85 GCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGG-ERSLVAN----LSAANCYKSEHLKKPENWALVEKAK 159 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g-~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~ 159 (341)
|.+|+|.+|+.+++.|++.||+++++...+.+|+.+++..+++ +++++.+ .++...+++++++ ....+.++|
T Consensus 55 ~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~---~~~~~~~~~ 131 (346)
T 3ktn_A 55 TKLPANRLGEAGKAALRKLGISDQWVGEKGDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYD---FEAFLAEVD 131 (346)
T ss_dssp EEECSSHHHHHHHHHHHHTTCBCTTEEECCSCCEEEEEECCBTTBCCEEEECCCTTSTTTTCCGGGSC---HHHHHTTCS
T ss_pred EecCCCHHHHHHHHHHHHcCCcceEEEeCCCceEEEEEEecCCCCCceEEecCCCCChhhhCChhhcC---hHHHhCCCC
Confidence 9999999999999999999999998866666788887766644 4456555 2455567777765 235689999
Q ss_pred EEEEeccccccCH---HHHHHHHHHHHhCCCeEEEeCC--chhHH----HHHHHHHHhhcCCCcEEecCHHHHHHHhhhc
Q 019448 160 YFYIAGFFLTVSP---DSIQLVAEHAAANNKVFMMNLS--APFIC----EFFKDALEKVLPYMDYIFGNETEARTFSKVQ 230 (341)
Q Consensus 160 ~v~i~~~~~~~~~---~~~~~~~~~a~~~~~~v~~d~~--~~~~~----~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~ 230 (341)
++|++++.+..++ +.+.++++.++++++++++|+. ...|. ....+.++++++++|++++|++|++.|++..
T Consensus 132 ~v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~ 211 (346)
T 3ktn_A 132 MVHICGISLSLTEKTRDAALILAQKAHAYQKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLGFI 211 (346)
T ss_dssp EEEECTHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCCHHHHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCC
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHHHHcCCEEEEeCCCChHHcCCccHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCC
Confidence 9999987653333 6788999999999999999995 33343 3345678899999999999999999998753
Q ss_pred -CC---CCCCHHHHHHHHhcCCcccc-CCccEEEEEeCCCc-------eEEEECCeeEEEeceecCCCcccCCCCCchhh
Q 019448 231 -GW---ETDDVEEIALKLSQWPKASE-IRKRTAVITQGADP-------VVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAF 298 (341)
Q Consensus 231 -~~---~~~d~~~~~~~l~~~~~~~~-~~~~~vvvt~G~~G-------~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf 298 (341)
.. +.++.+++++.| .+ .|++.||||+|++| ++++++++.+++|++++ +++|||||||+|
T Consensus 212 ~~~~~~~~~~~~~~~~~l------~~~~g~~~vvvT~G~~G~~~~~~g~~~~~~~~~~~~~~~~v---~vvdttGAGDaF 282 (346)
T 3ktn_A 212 PREDLEGEAQETELIQRF------MSQYNLEWFAGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPL---LNLDRIGAGDAY 282 (346)
T ss_dssp CCTTSCHHHHHHHHHHHH------HHHHTCSEEEEEEEEECSSCEEEEEEEECSSCEEECCCEEC---CCSCCTTHHHHH
T ss_pred CCccccchHHHHHHHHHH------HHhcCCCEEEEecCccccccCcceEEEEECCceEEeCCCcc---ccCCCCchhHHH
Confidence 11 113466777777 44 38899999999998 88888888889998876 789999999999
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHhhhhhhhcccc-CCCCCCC
Q 019448 299 VGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCT-YPEKPEF 340 (341)
Q Consensus 299 ~ag~~~~l~~g~~~~~a~~~a~~~Aa~~v~~~g~~-~p~~~~~ 340 (341)
+|||+++|++|+++++|+++|+++|+++|++.|+. +|+.+|+
T Consensus 283 ~ag~~~~l~~g~~l~~a~~~A~a~aa~~v~~~G~~~~p~~~ev 325 (346)
T 3ktn_A 283 AAGILYGYSQNWSLEKAVTFATVNGVLAHTIQGDIPLTTVKQV 325 (346)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSSCCCCCHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCCCCCCCCHHHH
Confidence 99999999999999999999999999999999984 6776553
|
| >3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-46 Score=342.08 Aligned_cols=291 Identities=18% Similarity=0.239 Sum_probs=238.8
Q ss_pred CCCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 1 ~~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
|.++++|+|+|++++|++..++ +.|.+++.... .....+||+++|+|++|++ ||.+
T Consensus 3 ~~~~~~v~viG~~~vD~~~~~~--------------------~~~~~g~~~~~-~~~~~~GG~~~NvA~~la~---LG~~ 58 (328)
T 3kzh_A 3 LRKEPYLLVFGASVVDVFGFSK--------------------ASYRPYNSTPG-HVKISFGGVCRNIAENMAR---VGVN 58 (328)
T ss_dssp -CCCCCEEEECCCEEEEEEEES--------------------SCCCTTSEEEE-EEEEEEECHHHHHHHHHHH---TTCC
T ss_pred CCCCCcEEEECcEEeeeeeccC--------------------CCCCCCCCceE-EEEEccCcHHHHHHHHHHH---cCCC
Confidence 3567899999999999999887 34444433333 5678999999999999998 4699
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCcccee-ecccccccCCcccCCCcchhhhhcc
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLV-ANLSAANCYKSEHLKKPENWALVEK 157 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~ 157 (341)
+.++|.+|+|.+|+.+++.|++.||+++++. .++.+|+.++++++ +|+|.+. ...+....++++.+.. ....+..
T Consensus 59 v~~i~~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 136 (328)
T 3kzh_A 59 TNFMSILGNDEHGKSIVEHSKKIGYHMDDSMVIEGGSTPTYLAILDENGEMVSAIADMKSIGAMNTDFIDS--KREIFEN 136 (328)
T ss_dssp EEEECEECSSHHHHHHHHHHHHHTEECTTCEECTTCCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHHH--THHHHHT
T ss_pred cEEEEEecCcHHHHHHHHHHHHcCCCccceEEeCCCCCeeEEEEEcCCCCEEEEEEchhhhhhCCHHHHHH--HHHhhcc
Confidence 9999999999999999999999999999874 56667999988887 6888763 3445555666665532 2356889
Q ss_pred ceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCH
Q 019448 158 AKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDV 237 (341)
Q Consensus 158 ~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~ 237 (341)
++++++++. .+ +.+..+++ +++.+.++++|+.+.. ..+.++++++++|++++|++|++.+++....+.+++
T Consensus 137 ~~~~~~~~~---~~-~~~~~l~~-a~~~~~~v~~D~~~~~----~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~ 207 (328)
T 3kzh_A 137 AEYTVLDSD---NP-EIMEYLLK-NFKDKTNFILDPVSAE----KASWVKHLIKDFHTIKPNRHEAEILAGFPITDTDDL 207 (328)
T ss_dssp CSEEEEESS---CH-HHHHHHHH-HHTTTSEEEEECCSHH----HHHTSTTTGGGCSEECCBHHHHHHHHTSCCCSHHHH
T ss_pred CCEEEEeCC---cH-HHHHHHHH-HhhcCCcEEEEeCCHH----HHHHHHHHhcCCcEEeCCHHHHHHHHCCCCCCHHHH
Confidence 999999874 23 67777777 8889999999998643 234466788999999999999999998654334566
Q ss_pred HHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHH
Q 019448 238 EEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVR 317 (341)
Q Consensus 238 ~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~ 317 (341)
+++++.+ .+.|++.+|||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|++
T Consensus 208 ~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~ag~~~~l~~g~~~~~a~~ 278 (328)
T 3kzh_A 208 IKASNYF------LGLGIKKVFISLDADGIFYNDGVSCGKIKATEV---DVKNVTGAGDSFVAGLGYGYMNKMPIEDIVK 278 (328)
T ss_dssp HHHHHHH------HHHTCCEEEEECGGGCEEEECSSCEEEEEESSC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHH------HHhCCCEEEEEeCCCCEEEEeCCceEEecCCCc---ccCCCCChhHHHHHHHHHHHHcCCCHHHHHH
Confidence 7788887 566899999999999999998888888887654 7999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhccccCC
Q 019448 318 AGCYTSHVIIQRSGCTYP 335 (341)
Q Consensus 318 ~a~~~Aa~~v~~~g~~~p 335 (341)
+|+++|+++|++.|+..|
T Consensus 279 ~A~a~aa~~v~~~G~~~~ 296 (328)
T 3kzh_A 279 FAMTMSNITISHEETIHP 296 (328)
T ss_dssp HHHHHHHHHHTSSSSSCT
T ss_pred HHHHHHHHHhcCCCCCCC
Confidence 999999999999998543
|
| >3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-47 Score=340.97 Aligned_cols=276 Identities=19% Similarity=0.235 Sum_probs=238.1
Q ss_pred CCCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 1 ~~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
|+|+++|+|+|++++|++..++ ++|.+++..+.......+||++.|+|++|++ ||.+
T Consensus 16 ~~mm~~i~viG~~~iD~~~~v~--------------------~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~---LG~~ 72 (310)
T 3go6_A 16 GPMAPRVCVVGSVNMDLTFVVD--------------------ALPRPGETVLAASLTRTPGGKGANQAVAAAR---AGAQ 72 (310)
T ss_dssp ---CCEEEEECCCEEEEEEECS--------------------SCCCTTCCCCCSEEEEEEECHHHHHHHHHHH---TTCE
T ss_pred ccccCCEEEECCceEEEEEecC--------------------CCCCCCCeEEecceeecCCCHHHHHHHHHHH---CCCC
Confidence 4567899999999999999887 5677666667778889999999999999998 4699
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccce
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAK 159 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 159 (341)
+.++|.+|+|.+|+.+++.|++.||+++++...+.+|+.++++++ +|+|+++.+.++...++ ++ ...++++|
T Consensus 73 ~~~i~~vG~D~~g~~i~~~L~~~gV~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~--~~-----~~~l~~~~ 145 (310)
T 3go6_A 73 VQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLT--PV-----PSAVANCD 145 (310)
T ss_dssp EEEECEECSSHHHHHHHHHHHHTTCBCTTCEECSSCCEEEEEEECTTSCEEEEEECGGGGGCC--CC-----TTTTTTCS
T ss_pred eEEEEEECCCHHHHHHHHHHHHcCCccceeEecCCCCCEEEEEEcCCCCEEEEecCChhhhHH--HH-----HHHhhcCC
Confidence 999999999999999999999999999988766678999988887 68999888877766665 23 25688999
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHH
Q 019448 160 YFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEE 239 (341)
Q Consensus 160 ~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~ 239 (341)
++++++ ..+.+.+..+++.+++++.++++|+....+ .++.++++++++|++++|++|++.|++.
T Consensus 146 ~v~~~~---~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~---~~~~~~~ll~~~dil~~N~~Ea~~l~g~---------- 209 (310)
T 3go6_A 146 VLLTQL---EIPVATALAAARAAQSADAVVMVNASPAGQ---DRSSLQDLAAIADVVIANEHEANDWPSP---------- 209 (310)
T ss_dssp EEEECS---SSCHHHHHHHHHHHHHTTCEEEEECCSSSC---CHHHHHHHHHHCSEEEEEHHHHHHSSSC----------
T ss_pred EEEECC---CCCHHHHHHHHHHHHHcCCEEEEcCCcccc---chHHHHHHHhhCCEEEeCHHHHHHHhCC----------
Confidence 999975 457889999999999999999999985432 3455778899999999999999987641
Q ss_pred HHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhc----CCCHHHH
Q 019448 240 IALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQ----EKPIEEC 315 (341)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~----g~~~~~a 315 (341)
++.+|||+|++|++++++++.+++|++++ +++||+||||+|+|||+++|++ |+++++|
T Consensus 210 ---------------~~~vvvt~G~~Ga~~~~~~~~~~~~~~~v---~vvdttGAGDaF~ag~~~~l~~~~~~g~~l~~a 271 (310)
T 3go6_A 210 ---------------PTHFVITLGVRGARYVGADGVFEVPAPTV---TPVDTAGAGDVFAGVLAANWPRNPGSPAERLRA 271 (310)
T ss_dssp ---------------CSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHCCSSSCCHHHHHHH
T ss_pred ---------------CCEEEEEECCCCEEEEECCceEEeCCCCC---CcCcCCCchHHHHHHHHHHHHhcccCCCCHHHH
Confidence 36799999999999999998899988765 7899999999999999999999 9999999
Q ss_pred HHHHHHHhhhhhhhccc--cCCCCCCC
Q 019448 316 VRAGCYTSHVIIQRSGC--TYPEKPEF 340 (341)
Q Consensus 316 ~~~a~~~Aa~~v~~~g~--~~p~~~~~ 340 (341)
+++|+++|+++|++.|+ .+|+.+|+
T Consensus 272 ~~~A~~~aa~~v~~~G~~~~~p~~~ev 298 (310)
T 3go6_A 272 LRRACAAGALATLVSGVGDCAPAAAAI 298 (310)
T ss_dssp HHHHHHHHHHHTTSSCSTTCCCCHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCHHHH
Confidence 99999999999999999 67887664
|
| >3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-47 Score=343.29 Aligned_cols=294 Identities=18% Similarity=0.255 Sum_probs=226.6
Q ss_pred CCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEE
Q 019448 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATS 82 (341)
Q Consensus 3 ~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~ 82 (341)
++++|+|+|++++|++...+ +.|. .+..+....+||++.|+|+++++ ||.++.
T Consensus 20 ~~~~v~viG~~~~D~~~~~~--------------------~~p~----~~~~~~~~~~GG~~~NvA~~la~---LG~~~~ 72 (327)
T 3hj6_A 20 GDLDVVSLGEILVDMISTEE--------------------VNSL----SQSREYTRHFGGSPANIAVNLSR---LGKKVA 72 (327)
T ss_dssp --CCEEEESCCEEEEECCCC--------------------CSSG----GGCCEEEEEEECHHHHHHHHHHH---TTCCEE
T ss_pred CCCCEEEEccceEEEeccCC--------------------CCCc----cccceeeeecCcHHHHHHHHHHH---cCCcEE
Confidence 45789999999999998765 3343 25567788999999999999998 469999
Q ss_pred EEeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccceEE
Q 019448 83 YIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYF 161 (341)
Q Consensus 83 ~i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 161 (341)
++|.+|+|.+|+.+++.|++.||+++++. ..+.+|+.+++..++|+++++.+.+++..++++++. ...+.++|++
T Consensus 73 ~ig~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~v~~~~g~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~v 148 (327)
T 3hj6_A 73 LISRLGADAFGNYLLDVLKGEQIITDGIQQDKERRTTIVYVSKSTRTPDWLPYREADMYLQEDDII----FELIKRSKVF 148 (327)
T ss_dssp EECEEESSHHHHHHHHHHHHTTCBCTTCEEESSSCCCEEEECCCTTCCCEEEECSGGGGCCSCCCH----HHHHC--CEE
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCCcccEEEcCCCCceEEEEEecCCCccEEEecChhhhCChhhcC----HhHhccCCEE
Confidence 99999999999999999999999999885 556678777665567888887777777777776654 2568899999
Q ss_pred EEecccc--ccCHHHHHHHHHHHHhCCCeEEEeCCchh--HH--HHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCC
Q 019448 162 YIAGFFL--TVSPDSIQLVAEHAAANNKVFMMNLSAPF--IC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETD 235 (341)
Q Consensus 162 ~i~~~~~--~~~~~~~~~~~~~a~~~~~~v~~d~~~~~--~~--~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~ 235 (341)
|++++.+ +.+.+.+.++++.++++++++++|+.... |. ....+.+.++++++|++++|++|++.+++. .
T Consensus 149 ~~~g~~l~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~-----~ 223 (327)
T 3hj6_A 149 HLSTFILSRKPARDTAIKAFNYAREQGKIVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGP-----D 223 (327)
T ss_dssp EEESHHHHSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGSCSSSCSHHHHHHHHTTCSEECCBHHHHHHHHTT-----S
T ss_pred EECchHhcCchhHHHHHHHHHHHHHCCCEEEEECCCchhhcCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCC-----C
Confidence 9998753 23567889999999999999999997432 21 112456788999999999999999999874 3
Q ss_pred CHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHH
Q 019448 236 DVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEEC 315 (341)
Q Consensus 236 d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a 315 (341)
+++++++.+ .+.|++.+|||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|
T Consensus 224 ~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~ag~~~~l~~g~~~~~a 294 (327)
T 3hj6_A 224 SPENYVKRY------LELGVKAVILTLGEEGVIASDGEEIIRIPAFSE---DAVDVTGAGDAFWSGFICGLLDGYTVKRS 294 (327)
T ss_dssp CSSGGGGGG------TTTTCSEEEEECSTTCEEEECSSCEEESCSSTT---C-----CCHHHHHHHHHHTTSSCSTTHHH
T ss_pred CHHHHHHHH------HhCCCCEEEEEECCCceEEEeCCeeEEcCCccc---ccCCCcChhHHHHHHHHHHHHcCCCHHHH
Confidence 455667766 567899999999999999998888888887654 89999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhccc--cCCCCCCCC
Q 019448 316 VRAGCYTSHVIIQRSGC--TYPEKPEFN 341 (341)
Q Consensus 316 ~~~a~~~Aa~~v~~~g~--~~p~~~~~~ 341 (341)
+++|+++|+++|++.|+ .+|+.+|+.
T Consensus 295 ~~~A~a~aa~~v~~~G~~~~~p~~~ev~ 322 (327)
T 3hj6_A 295 IKLGNGVAAFKIRGVGALSPVPSKEDII 322 (327)
T ss_dssp HHHHHCCCSSCC----------------
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCHHHHH
Confidence 99999999999999998 688988863
|
| >3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=334.43 Aligned_cols=294 Identities=20% Similarity=0.236 Sum_probs=240.1
Q ss_pred CCCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 1 ~~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
||++++|+++|++++|++...+ ..|. .+..+....+||++.|+|+++++ ||.+
T Consensus 5 ~~~~~~v~~iG~~~~D~~~~~~--------------------~~p~----~~~~~~~~~~GG~~~NvA~~la~---LG~~ 57 (319)
T 3pl2_A 5 LTSTHEVLAIGRLGVDIYPLQS--------------------GVGL----ADVQSFGKYLGGSAANVSVAAAR---HGHN 57 (319)
T ss_dssp --CCCSEEEESCCEEEECBSSS--------------------SCCG----GGCCCBCCEEECHHHHHHHHHHH---TTCC
T ss_pred cccCCCEEEEChhheeeecccC--------------------CCCc----cccceeeecCCCcHHHHHHHHHH---CCCc
Confidence 7888899999999999998664 2333 13566788999999999999998 4699
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecc--cc-cccCCcccCCCcchhhhh
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANL--SA-ANCYKSEHLKKPENWALV 155 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l 155 (341)
+.++|.+|+|.+|+.+++.|+++||+++++. .++.+|+.+++.++ +|++.++.+. ++ ...++++++.. ..+
T Consensus 58 ~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~----~~~ 133 (319)
T 3pl2_A 58 SALLSRVGNDPFGEYLLAELERLGVDNQYVATDQTFKTPVTFCEIFPPDDFPLYFYREPKAPDLNIESADVSL----DDV 133 (319)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHTTEECTTEEEESSSCCCEEEECCBTTTBCCEEEECCSCCGGGGCCGGGSCH----HHH
T ss_pred eEEEEEeCCCHHHHHHHHHHHHcCCccccEEecCCCCceEEEEEEcCCCCeeEEEecCCCcccccCChhhCCH----HHh
Confidence 9999999999999999999999999999885 56678888877665 6777766553 33 45677777753 668
Q ss_pred ccceEEEEeccccccC--HHHHHHHHHHHHhCCCeEEEeCC--chhHH--HHHHHHHHhhcCCCcEEecCHHHHHHHhhh
Q 019448 156 EKAKYFYIAGFFLTVS--PDSIQLVAEHAAANNKVFMMNLS--APFIC--EFFKDALEKVLPYMDYIFGNETEARTFSKV 229 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~--~~~~~~~~~~a~~~~~~v~~d~~--~~~~~--~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~ 229 (341)
.+++++|++++.+... .+.+..+++.+++ +.++++|+. ...|. ....+.++++++++|++++|++|++.+++.
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~ 212 (319)
T 3pl2_A 134 READILWFTLTGFSEEPSRGTHREILTTRAN-RRHTIFDLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIAVGE 212 (319)
T ss_dssp HHCSEEEEEGGGGSSTTHHHHHHHHHHHHTT-CSCEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEECHHHHHHHHSC
T ss_pred ccCCEEEEecccccCchhHHHHHHHHHHHHH-CCcEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEEcCHHHHHHHcCC
Confidence 8999999999864332 3456666666665 556678875 22332 234566889999999999999999999873
Q ss_pred cCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcC
Q 019448 230 QGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE 309 (341)
Q Consensus 230 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g 309 (341)
.+++++++.+ .+.|++.+|||+|++|++++++++.+++|++++ +++||+||||+|+|||+++|++|
T Consensus 213 -----~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g 278 (319)
T 3pl2_A 213 -----TEPERAGRAL------LERGVELAIVKQGPKGVMAMTKDETVEVPPFFV---DVINGLGAGDAFGGALCHGLLSE 278 (319)
T ss_dssp -----CSHHHHHHHH------HHTTCSEEEEEEETTEEEEECSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTT
T ss_pred -----CCHHHHHHHH------HhcCCCEEEEEECCCCeEEEECCceEEeCCccc---CCCCCcCchHHHHHHHHHHHHcC
Confidence 5788889988 667899999999999999998888889988765 79999999999999999999999
Q ss_pred CCHHHHHHHHHHHhhhhhhhccc--cCCCCCCC
Q 019448 310 KPIEECVRAGCYTSHVIIQRSGC--TYPEKPEF 340 (341)
Q Consensus 310 ~~~~~a~~~a~~~Aa~~v~~~g~--~~p~~~~~ 340 (341)
+++++|+++|+++|+++|++.|+ .+|+.+|+
T Consensus 279 ~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 311 (319)
T 3pl2_A 279 WPLEKVLRFANTAGALVASRLECSTAMPTTDEV 311 (319)
T ss_dssp CCHHHHHHHHHHHHHHHHTSSCSGGGCCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhccCCcCCCCCHHHH
Confidence 99999999999999999999997 57887664
|
| >3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-47 Score=340.75 Aligned_cols=276 Identities=20% Similarity=0.242 Sum_probs=239.8
Q ss_pred CceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEE
Q 019448 4 EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSY 83 (341)
Q Consensus 4 ~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~ 83 (341)
+++|+|+|++++|++..++ ++|.+++..........+||++.|+|+++++ ||.++.+
T Consensus 2 ~~~i~viG~~~iD~~~~~~--------------------~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~---lG~~~~~ 58 (299)
T 3ikh_A 2 SLRVYVTGNITVDETWSIP--------------------DIPKKGASIHGVKVSQDIGGKGANQAIILSR---CGIETRL 58 (299)
T ss_dssp CCCEEEECCCEEEEEEECS--------------------SCCCTTCEEECEEEEEEEECHHHHHHHHHHH---TTCCEEE
T ss_pred CceEEEECceEEEEEEecC--------------------CCCCCCCeEEeeeeeeccCCHHHHHHHHHHH---CCCCeEE
Confidence 4579999999999999887 5666666666667889999999999999998 4699999
Q ss_pred EeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccceEEE
Q 019448 84 IGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFY 162 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 162 (341)
+|.+|+|.+|+.+++.|++.||+++++...+.+|+.++++++ +|+|+++.+.+++..++++++.. ..+.+.++++++
T Consensus 59 i~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~T~~~~~~~~~~g~~~~~~~~~a~~~l~~~~~~~--~~~~~~~~~~v~ 136 (299)
T 3ikh_A 59 IAATGNDSNGAWIRQQIKNEPLMLLPDGHFNQHSDTSIILNSADGDNAIITTTAAADTFSLDEMIP--HMADAVAGDILL 136 (299)
T ss_dssp ECCCCSSHHHHHHHHHGGGSSCEEESSSCCSSCCEEEEEECSSSCSCEEEEECHHHHHCCHHHHGG--GGTTCCTTCEEE
T ss_pred EEEECCCHHHHHHHHHHHHcCCceeeeEecCCCCcEEEEEEcCCCCeEEEEeCCccccCCHHHHHH--HHhhhccCCEEE
Confidence 999999999999999999999999998766678999988886 78998888878777888877653 235678999999
Q ss_pred EeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHH
Q 019448 163 IAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL 242 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~ 242 (341)
+++ ..+.+.+..+++.+++++.++++|+.... +.+.++++++|++++|++|++.|++
T Consensus 137 ~~g---~~~~~~~~~~~~~a~~~g~~v~~D~~~~~------~~~~~ll~~~dil~~N~~E~~~l~g-------------- 193 (299)
T 3ikh_A 137 QQG---NFSLDKTRALFQYARSRGMTTVFNPSPVN------PDFCHLWPLIDIAVVNESEAELLQP-------------- 193 (299)
T ss_dssp ECS---CSCHHHHHHHHHHHHHTTCEEEECCCSCC------GGGGGCGGGCSEEEEEHHHHHHHCC--------------
T ss_pred ECC---CCCHHHHHHHHHHHHHcCCEEEEccccch------hhHHHHHhhCCEEEecHHHHHHHhc--------------
Confidence 986 35678899999999999999999997642 2356789999999999999998753
Q ss_pred HHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHH-HHHHHHhcCCCHHH-HHHHHH
Q 019448 243 KLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG-GFLSQLVQEKPIEE-CVRAGC 320 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~a-g~~~~l~~g~~~~~-a~~~a~ 320 (341)
.+++.+|||+|++|++++++++.+++|++++ +++||+||||+|+| ||+++|++|+++++ |+++|+
T Consensus 194 ----------~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaf~a~~~~~~l~~g~~~~~~a~~~a~ 260 (299)
T 3ikh_A 194 ----------YGVKTLVITQGAAGAWLVQEGQRQFCPAVPA---EALDTTGAGDTFLAVMLASALLRGVAPDALALAHAS 260 (299)
T ss_dssp ----------CSCSEEEEECGGGCEEEECSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHHTTSSSCHHHHHHHH
T ss_pred ----------CCCCEEEEEECCCceEEEeCCceEEeCCCCC---ccCCCCCchHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 2578999999999999998888889988765 88999999999999 99999999999999 999999
Q ss_pred HHhhhhhhhcccc--CCCCCCC
Q 019448 321 YTSHVIIQRSGCT--YPEKPEF 340 (341)
Q Consensus 321 ~~Aa~~v~~~g~~--~p~~~~~ 340 (341)
++|+++|++.|+. +|+.+|+
T Consensus 261 ~~aa~~v~~~G~~~~~p~~~ev 282 (299)
T 3ikh_A 261 RAAAITVSRRGTLSAFPGSREL 282 (299)
T ss_dssp HHHHHHHHSSSSTTTSCCHHHH
T ss_pred HHHHHHhCCCcccccCCCHHHH
Confidence 9999999999984 6877654
|
| >4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-45 Score=331.80 Aligned_cols=288 Identities=18% Similarity=0.239 Sum_probs=237.2
Q ss_pred CCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcE
Q 019448 2 AQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGAT 81 (341)
Q Consensus 2 ~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v 81 (341)
+++++|+|+|++++|++.... + ......+||+++|+|+++++|. .|.++
T Consensus 21 ~~m~~i~viG~~~iD~~~~~~----------------------~--------~~~~~~~GG~~~NvA~~la~Lg-~G~~~ 69 (328)
T 4e69_A 21 QSMMHILSIGECMAELAPADL----------------------P--------GTYRLGFAGDTFNTAWYLARLR-PESRI 69 (328)
T ss_dssp BSSCEEEEESCCEEEEEECSS----------------------T--------TEEEEEEECHHHHHHHHHHHHC-TTSEE
T ss_pred ccCCcEEEecCcEEEEecCCC----------------------C--------CceEEecCCHHHHHHHHHHhcC-CCCcE
Confidence 455789999999999997421 0 3457899999999999999832 25999
Q ss_pred EEEeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEeCCccceeecccccc---cCCcccCCCcchhhhhcc
Q 019448 82 SYIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVVGGERSLVANLSAAN---CYKSEHLKKPENWALVEK 157 (341)
Q Consensus 82 ~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~ 157 (341)
.++|.+|+|.+|+.+++.|++.||+++++. .++.+|+.+++.+++|+|+++.+.+... .+++.++ ....+.+
T Consensus 70 ~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~v~~~~g~r~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 145 (328)
T 4e69_A 70 SYFSAIGDDALSQQMRAAMSAAGIDGGGLRVIPGRTVGLYLITLEQGERSFAYWRGQSAARELAGDADA----LAAAMAR 145 (328)
T ss_dssp EEECEECSSHHHHHHHHHHHHTTEECTTCEECTTCCCEEEEEEEETTEEEEEEECTTCGGGGTTSCHHH----HHHHHTT
T ss_pred EEEEeeCCCHHHHHHHHHHHHcCCccceEEEcCCCCCeEEEEEecCCceEEEEeCCCCHHHhhcCcccc----chHHhcC
Confidence 999999999999999999999999999875 4556799988888888998877655422 1222222 1256889
Q ss_pred ceEEEEeccccc----cCHHHHHHHHHHHHhCCCeEEEeCC--chhHH--HHHHHHHHhhcCCCcEEecCHHHHHHHhhh
Q 019448 158 AKYFYIAGFFLT----VSPDSIQLVAEHAAANNKVFMMNLS--APFIC--EFFKDALEKVLPYMDYIFGNETEARTFSKV 229 (341)
Q Consensus 158 ~~~v~i~~~~~~----~~~~~~~~~~~~a~~~~~~v~~d~~--~~~~~--~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~ 229 (341)
+|+++++++.+. .+.+.+.++++.++++++++++||. +..|. ....+.++++++++|++++|++|++.|++.
T Consensus 146 ~~~v~~~g~~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~ 225 (328)
T 4e69_A 146 ADVVYFSGITLAILDQCGRATLLRALAQARATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEAAWFGD 225 (328)
T ss_dssp CSEEEEEHHHHHTSCHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCHHHHHHHHHHHHTTCSEECCBHHHHHHHHTC
T ss_pred CCEEEECCchhhccCchHHHHHHHHHHHHHhCCCEEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEeCCHHHHHHHcCC
Confidence 999999987542 2346788999999999999999994 33331 335566788999999999999999999873
Q ss_pred cCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcC
Q 019448 230 QGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE 309 (341)
Q Consensus 230 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g 309 (341)
++++++++.+ .+.|++.||||+|++|++++++++.+++|+++ .++++||+||||+|+|||+++|++|
T Consensus 226 -----~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~--~~~vvdttGAGDaf~a~~~~~l~~g 292 (328)
T 4e69_A 226 -----AGPDATADRY------ARAGVRSVVVKNGPHAVHFLQDGRRGRVPVPP--VAQVVDTTAAGDSFNAGLLDSVLAG 292 (328)
T ss_dssp -----SSHHHHHHHH------HTTTCSEEEEBCTTSCEEEEETTEEEEECCCC--CCSCCCCTTHHHHHHHHHHHHHHTT
T ss_pred -----CCHHHHHHHH------HhcCCCEEEEEeCCCCeEEEeCCceEEecCCC--CCCccCCCChhHHHHHHHHHHHHCC
Confidence 4788999998 66789999999999999999999888888764 2489999999999999999999999
Q ss_pred CCHHHHHHHHHHHhhhhhhhccccCCCC
Q 019448 310 KPIEECVRAGCYTSHVIIQRSGCTYPEK 337 (341)
Q Consensus 310 ~~~~~a~~~a~~~Aa~~v~~~g~~~p~~ 337 (341)
+++++|+++|+++|+++|++.|+..|..
T Consensus 293 ~~l~~a~~~A~~~aa~~v~~~Ga~~p~~ 320 (328)
T 4e69_A 293 QPLETAIAAAAALAGQVVQGKGALVEVP 320 (328)
T ss_dssp CCHHHHHHHHHHHHHHHHTSSSSSCCC-
T ss_pred CCHHHHHHHHHHHHHHHHccCCCcCChh
Confidence 9999999999999999999999988765
|
| >3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=334.45 Aligned_cols=299 Identities=22% Similarity=0.332 Sum_probs=238.1
Q ss_pred CCC-CceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCC
Q 019448 1 MAQ-EGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPG 79 (341)
Q Consensus 1 ~~~-~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~ 79 (341)
|+| +++|+|+|++++|++.....+. +...+++|. .+....+||+++|+|+++++ ||.
T Consensus 1 m~m~~~~v~~iG~~~~D~~~~~~~~~------------~~~~~~~p~-------~~~~~~~GG~~~NvA~~la~---LG~ 58 (325)
T 3h49_A 1 MSLDNLDVICIGAAIVDIPLQPVSKN------------IFDVDSYPL-------ERIAMTTGGDAINEATIISR---LGH 58 (325)
T ss_dssp ----CEEEEEESCCEEEEEECSCCGG------------GGGSSCCCC-------SCCCCEEESHHHHHHHHHHH---TTC
T ss_pred CCCCCCeEEEEChhhheeeccCCCCc------------cccccccch-------heeEEccCcHHHHHHHHHHH---CCC
Confidence 555 6799999999999976432110 111112221 45678999999999999998 569
Q ss_pred cEEEEeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecccc-cccCCcccCCCcchhhhhc
Q 019448 80 ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSA-ANCYKSEHLKKPENWALVE 156 (341)
Q Consensus 80 ~v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~ 156 (341)
++.++|.+|+|.+|+.+++.|++.||+++++. .++.+|+.++++++ +|+|+++.+.+. ...++++++.. ..+.
T Consensus 59 ~~~~ig~vG~D~~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~----~~~~ 134 (325)
T 3h49_A 59 RTALMSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDF----ARFS 134 (325)
T ss_dssp EEEEECEEESSHHHHHHHHHHHHHTCBCSSCEEETTSCCCEEEEEECTTSCEEEECCTTSHHHHCCGGGCCG----GGGG
T ss_pred CeEEEEEECCChHHHHHHHHHHHcCCceeeEEecCCCCCceEEEEECCCCceeEEeccCcccccCChhhcCh----hhhc
Confidence 99999999999999999999999999999875 45678999888886 789988776543 34577777653 5688
Q ss_pred cceEEEEeccccc--cCHHHHHHHHHHHHhCCCeEEEe-CCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCC
Q 019448 157 KAKYFYIAGFFLT--VSPDSIQLVAEHAAANNKVFMMN-LSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWE 233 (341)
Q Consensus 157 ~~~~v~i~~~~~~--~~~~~~~~~~~~a~~~~~~v~~d-~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~ 233 (341)
+++++|++++... .+.+.+..+++.+++++..++.+ +++..|. ..+.+.++++++|++++|++|++.|++.
T Consensus 135 ~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~~d~~~~~~~~~--~~~~~~~~l~~~dil~~N~~E~~~l~g~---- 208 (325)
T 3h49_A 135 QAKLLSLASIFNSPLLDGKALTEIFTQAKARQMIICADMIKPRLNE--TLDDICEALSYVDYLFPNFAEAKLLTGK---- 208 (325)
T ss_dssp GCSEEEEEEETTSTTSCHHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHHHHTTCSEEECBHHHHHHHHTC----
T ss_pred cCCEEEEecccCCcccCHHHHHHHHHHHHhcCCEEEecCCchhhhh--HHHHHHHHHhhCCEEecCHHHHHHHhCC----
Confidence 9999999986532 34578899999999998654433 3333221 2344678899999999999999999873
Q ss_pred CCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHH
Q 019448 234 TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIE 313 (341)
Q Consensus 234 ~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~ 313 (341)
.+++++++.+ .+.|++.||||+|++|++++++++.+++|+++. .+++|||||||+|+|||+++|++|++++
T Consensus 209 -~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~--~~vvDttGAGDaf~ag~~~~l~~g~~~~ 279 (325)
T 3h49_A 209 -ETLDEIADCF------LACGVKTVVIKTGKDGCFIKRGDMTMKVPAVAG--ITAIDTIGAGDNFASGFIAALLEGKNLR 279 (325)
T ss_dssp -SSHHHHHHHH------HTTTCSEEEEECTTSCEEEEETTEEEEECCCSS--CCCSCCTTHHHHHHHHHHHHHHTTCCHH
T ss_pred -CCHHHHHHHH------HHcCCCEEEEEeCCCCeEEEECCeEEEecCcCC--CCCcCCCChhHHHHHHHHHHHHcCCCHH
Confidence 4788888888 667899999999999999999988888887653 3789999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhhccc--cCCCCCCC
Q 019448 314 ECVRAGCYTSHVIIQRSGC--TYPEKPEF 340 (341)
Q Consensus 314 ~a~~~a~~~Aa~~v~~~g~--~~p~~~~~ 340 (341)
+|+++|+++|+++|++.|+ .+|+.+|+
T Consensus 280 ~a~~~A~~~aa~~v~~~G~~~~~p~~~ev 308 (325)
T 3h49_A 280 ECARFANATAAISVLSVGATTGVKNRKLV 308 (325)
T ss_dssp HHHHHHHHHHHHHHTSSSSSSSCSSSHHH
T ss_pred HHHHHHHHHHHHHHcccCCCCCCCCHHHH
Confidence 9999999999999999997 47887653
|
| >2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-46 Score=332.81 Aligned_cols=286 Identities=20% Similarity=0.288 Sum_probs=236.3
Q ss_pred CCCC-ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCC
Q 019448 1 MAQE-GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPG 79 (341)
Q Consensus 1 ~~~~-~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~ 79 (341)
|+++ ++|+++|++++|++..++ ++|..++..........+||+++|+|+++++ ||.
T Consensus 1 ~~~~m~~i~viG~~~iD~~~~~~--------------------~~p~~~~~~~~~~~~~~~GG~~~N~A~~la~---LG~ 57 (302)
T 2c4e_A 1 MGGKMEKITCVGHTALDYIFNVE--------------------KFPEPNTSIQIPSARKYYGGAAANTAVGIKK---LGV 57 (302)
T ss_dssp -CCCEEEEEEESCCEEEEEEECS--------------------SCCCTTCCCCCSCEEEEEECHHHHHHHHHHH---TTC
T ss_pred CCCCcCcEEEECceeEEEEeccc--------------------ccCCCCceeeecceeecCCCHHHHHHHHHHH---CCC
Confidence 4444 489999999999999887 4566666566677888999999999999998 469
Q ss_pred cEEEEeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhcc
Q 019448 80 ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEK 157 (341)
Q Consensus 80 ~v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 157 (341)
++.++|.+|+|.+|+.+++.|++.||+++++. .++.+|+.++++++ +|+|+++.+.+++..++++++.. .+
T Consensus 58 ~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~ 130 (302)
T 2c4e_A 58 NSELLSCVGYDFKNSGYERYLKNLDINISKLYYSEEEETPKAWIFTDKDNNQITFFLWGAAKHYKELNPPN-------FN 130 (302)
T ss_dssp EEEEECEECTTTTTSHHHHHHHHTTCBCTTCEECSSSCCCEEEEEECSSCCEECCEECGGGGGGGGCCCCC-------CC
T ss_pred ceEEEEEEeCCCchHHHHHHHHHcCCcccceEeeCCCCCceEEEEECCCCCEEEEEeCChhhhCCHhhcCc-------cc
Confidence 99999999999999999999999999998774 45667999988886 68888887777776777776642 68
Q ss_pred ceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCH
Q 019448 158 AKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDV 237 (341)
Q Consensus 158 ~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~ 237 (341)
++++|+++. .++.+..+++.+++++ ++++|+....+. ...+.++++++++|++++|++|++.|++.... +.
T Consensus 131 ~~~v~~~~~----~~~~~~~~~~~a~~~g-~v~~D~~~~~~~-~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~---~~ 201 (302)
T 2c4e_A 131 TEIVHIATG----DPEFNLKCAKKAYGNN-LVSFDPGQDLPQ-YSKEMLLEIIEHTNFLFMNKHEFERASNLLNF---EI 201 (302)
T ss_dssp EEEEEECSS----CHHHHHHHHHHHBTTB-EEEECCGGGGGG-CCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTC---CH
T ss_pred CCEEEEeCC----CcHHHHHHHHHHHhcC-CEEEeCchhhhh-hhHHHHHHHHhcCCEEEcCHHHHHHHhCCCCc---cH
Confidence 999999863 3488899999999999 999999743211 12355678899999999999999999875321 11
Q ss_pred HHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCc-ccCCCCCchhhHHHHHHHHhcCCCHHHHH
Q 019448 238 EEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDK-LVDTNGAGDAFVGGFLSQLVQEKPIEECV 316 (341)
Q Consensus 238 ~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~-~vd~tGAGDaf~ag~~~~l~~g~~~~~a~ 316 (341)
. ++ .+. ++.+|||+|++|++++++++.+++|++++ + ++||+||||+|+|||+++|++|+++++|+
T Consensus 202 ~----~l------~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~~vdt~GAGDaf~a~~~~~l~~g~~~~~a~ 267 (302)
T 2c4e_A 202 D----DY------LER-VDALIVTKGSKGSVIYTKDKKIEIPCIKA---GKVIDPTGAGDSYRAGFLSAYVKGYDLEKCG 267 (302)
T ss_dssp H----HH------HTT-CSEEEEECGGGCEEEECSSCEEEECCCCC---SCCSCCTTHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred H----HH------Hhc-CCEEEEEECCCceEEEeCCcEEEeCCccC---CcCCcCCCchHHHHHHHHHHHHcCCCHHHHH
Confidence 1 44 445 78999999999999998888888887755 6 89999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhccc--cCCCCCC
Q 019448 317 RAGCYTSHVIIQRSGC--TYPEKPE 339 (341)
Q Consensus 317 ~~a~~~Aa~~v~~~g~--~~p~~~~ 339 (341)
++|+++|++++++.|+ .+|+.+|
T Consensus 268 ~~a~~~aa~~~~~~G~~~~~p~~~e 292 (302)
T 2c4e_A 268 LIGAATASFVVEAKGCQTNLPTWDK 292 (302)
T ss_dssp HHHHHHHHHHTTSSSSSTTCCCHHH
T ss_pred HHHHHHHHHHHccccccccCCCHHH
Confidence 9999999999999998 4677654
|
| >2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=327.97 Aligned_cols=297 Identities=19% Similarity=0.250 Sum_probs=237.4
Q ss_pred CCCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 1 ~~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
|+++++|+|+|++++|++...+ ..|. .........+||++.|+|+++++ ||.+
T Consensus 8 ~~~~~~i~viG~~~~D~~~~~~--------------------~~~~----~~~~~~~~~~GG~~~NvA~~la~---LG~~ 60 (332)
T 2qcv_A 8 TDREFDLIAIGRACIDLNAVEY--------------------NRPM----EETMTFSKYVGGSPANIVIGSSK---LGLK 60 (332)
T ss_dssp SCCSEEEEEESCCEEEEEESSC--------------------SSCG----GGCCCEEEEEESHHHHHHHHHHH---TTCC
T ss_pred cccCCcEEEECcceEEEecCCC--------------------CCCc----cccceeEecCCCHHHHHHHHHHH---cCCc
Confidence 5667799999999999998653 2222 23456788999999999999998 4699
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeeecC--CCCceeEEEEEe-CCccceeecc--cccccCCcccCCCcchhhhh
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDE--SASTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKKPENWALV 155 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~--~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~l 155 (341)
+.++|.+|+|.+|+.+++.|++.||+++++... ..+|+.+++.++ +|+++++.+. +++..++++++.. ..+
T Consensus 61 ~~~i~~vG~D~~G~~l~~~L~~~gV~~~~v~~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~a~~~l~~~~~~~----~~~ 136 (332)
T 2qcv_A 61 AGFIGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNE----AYI 136 (332)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCCEEEEEEEETTEEEEEEECTTCGGGGCCGGGCCH----HHH
T ss_pred eEEEEEeCCCHHHHHHHHHHHHcCCCCcceEecCCCCCceEEEEEEcCCCCccEEEECCcchhhhCCHhHCCH----HHH
Confidence 999999999999999999999999999988543 346888877654 6777665443 3455677777653 457
Q ss_pred ccceEEEEeccccc--cCHHHHHHHHHHHHhCCCeEEEeCCch--hHH--HHHHHHHHhhcCCCcEEecCHHHHHHHhhh
Q 019448 156 EKAKYFYIAGFFLT--VSPDSIQLVAEHAAANNKVFMMNLSAP--FIC--EFFKDALEKVLPYMDYIFGNETEARTFSKV 229 (341)
Q Consensus 156 ~~~~~v~i~~~~~~--~~~~~~~~~~~~a~~~~~~v~~d~~~~--~~~--~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~ 229 (341)
++++++|++++.+. .+.+.+..+++.+++++.++++|+... .|. ....+.++++++++|++++|++|++.|++.
T Consensus 137 ~~~~~v~~~g~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~ 216 (332)
T 2qcv_A 137 RRSKLLLVSGTALSKSPSREAVLKAIRLAKRNDVKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENR 216 (332)
T ss_dssp TTEEEEEEEGGGGSSTTHHHHHHHHHHHHHHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHHHCSEEEEEHHHHHHHTTC
T ss_pred ccCCEEEEeCccccCchhHHHHHHHHHHHHHCCCEEEEcCcCchhhcCCHHHHHHHHHHHHHhCCEEEccHHHHHHHhCC
Confidence 89999999987642 234778899999999999999999642 221 223455677899999999999999999875
Q ss_pred cCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEEC-CeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhc
Q 019448 230 QGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQD-GKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQ 308 (341)
Q Consensus 230 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~-~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~ 308 (341)
.. .++..++++++ .+.|++.+|||+|++|++++++ ++.+++|++++ +++||+||||+|+|||+++|++
T Consensus 217 ~~--~~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v---~vvdt~GAGDaf~a~~~~~l~~ 285 (332)
T 2qcv_A 217 TE--KGDNDETIRYL------FKHSPELIVIKHGVEGSFAYTKAGEAYRGYAYKT---KVLKTFGAGDSYASAFLYALIS 285 (332)
T ss_dssp SS--CCCHHHHHHHH------TTSSCSEEEEECGGGCEEEEETTSCEEEECCBCC---CCSCCTTHHHHHHHHHHHHHHT
T ss_pred Cc--CCCHHHHHHHH------HHcCCCEEEEEECCcceEEEecCCceEEcCCCCc---cccCCCCcHHHHHHHHHHHHHc
Confidence 32 24677888888 6678999999999999999987 66788887755 7899999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhhhhhhcccc--CCCCCC
Q 019448 309 EKPIEECVRAGCYTSHVIIQRSGCT--YPEKPE 339 (341)
Q Consensus 309 g~~~~~a~~~a~~~Aa~~v~~~g~~--~p~~~~ 339 (341)
|+++++|+++|+++|++++++.|+. +|+.+|
T Consensus 286 g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~e 318 (332)
T 2qcv_A 286 GKGIETALKYGSASASIVVSKHSSSDAMPSVEE 318 (332)
T ss_dssp TCCHHHHHHHHHHHHHHHHHC-----CCCCHHH
T ss_pred CCCHHHHHHHHHHHHHHHHccCCCccCCCCHHH
Confidence 9999999999999999999999984 777655
|
| >2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-45 Score=332.26 Aligned_cols=292 Identities=21% Similarity=0.243 Sum_probs=233.6
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i 84 (341)
++|+|+|++++|++..++ +.|.+++.... .....+||++.|+|+++++ ||.++.++
T Consensus 4 ~~i~viG~~~~D~~~~~~--------------------~~~~~~~~~~~-~~~~~~GG~~~NvA~~la~---LG~~~~~i 59 (317)
T 2nwh_A 4 KKILVLGGAHIDRRGMIE--------------------TETAPGASNPG-SWMEEAGGGGFNAARNLSR---LGFEVRII 59 (317)
T ss_dssp CEEEEESCCEEEEEEEES--------------------SSCCTTSCCCE-EEEEEEECHHHHHHHHHHH---TTCEEEEE
T ss_pred CeEEEECchheEEeeccC--------------------CCCCCCCCceE-eEEEeCCcHHHHHHHHHHh---cCCCcEEE
Confidence 589999999999999876 22333332222 2678999999999999998 46999999
Q ss_pred eeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEe-CCccceeecc-cccccCCcccCCCcchhhhhccceEEE
Q 019448 85 GCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANL-SAANCYKSEHLKKPENWALVEKAKYFY 162 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~v~ 162 (341)
|.+|+|.+|+.+++.|+++||+++++..++.+|+.++++++ +|++++.... +....++++.+........+..+++++
T Consensus 60 ~~vG~D~~G~~l~~~L~~~gV~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 139 (317)
T 2nwh_A 60 APRGGDVTGEVVAEAARQAGVEDTPFTFLDRRTPSYTAILERDGNLVIALADMDLYKLFTPRRLKVRAVREAIIASDFLL 139 (317)
T ss_dssp CEEESSHHHHHHHHHHHHTTCEECCEEETTSCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHTSHHHHHHHHHCSEEE
T ss_pred EeecCCchHHHHHHHHHHcCCCCCCcccCCCCCceEEEEEcCCCCEEEEEcchHHHhhCCHHHhhhhhhhhHhccCCEEE
Confidence 99999999999999999999999986566778999988886 6888765443 344557776655311114678899999
Q ss_pred EeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHH
Q 019448 163 IAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL 242 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~ 242 (341)
+++ ..+.+.+..+++.+++++.++++||.... ..+.++++++++|++++|++|++.|++. +.++++++++
T Consensus 140 ~~~---~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~----~~~~~~~ll~~~dil~~N~~E~~~l~g~---~~~~~~~~~~ 209 (317)
T 2nwh_A 140 CDA---NLPEDTLTALGLIARACEKPLAAIAISPA----KAVKLKAALGDIDILFMNEAEARALTGE---TAENVRDWPN 209 (317)
T ss_dssp EET---TSCHHHHHHHHHHHHHTTCCEEEECCSHH----HHGGGTTTGGGCSEEEEEHHHHHHHHC--------CTTHHH
T ss_pred EeC---CCCHHHHHHHHHHHHhcCCeEEEeCCCHH----HHHHHHHHhhhCeEecCCHHHHHHHhCC---ChhHHHHHHH
Confidence 975 34678899999999999999999998532 1234567889999999999999999874 2345567777
Q ss_pred HHhcCCccccCCccEEEEEeCCCceEEEECC-eeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHH
Q 019448 243 KLSQWPKASEIRKRTAVITQGADPVVVAQDG-KLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCY 321 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~-~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~ 321 (341)
.+ .+.|++.||||+|++|+++++++ ..+++|++++ +++||+||||+|+|||+++|++|+++++|+++|++
T Consensus 210 ~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v---~~vdt~GAGDaf~a~~~~~l~~g~~~~~a~~~A~~ 280 (317)
T 2nwh_A 210 IL------RKAGLSGGVVTRGASEVVAFNGTEKAILHPPLIR---EVKDVTGAGDAMASGYLAAIAEGKTIREALRQGAA 280 (317)
T ss_dssp HH------HHTTCCCEEEEETTTEEEEECSSCEEEECCCCSS---SCSCCCCSSHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HH------HHcCCCEEEEEECCCcEEEEcCCCceEEeCCCCc---cccCCCChhHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 77 56688999999999999998766 4577777654 89999999999999999999999999999999999
Q ss_pred Hhhhhhhhcccc--CCCCCC
Q 019448 322 TSHVIIQRSGCT--YPEKPE 339 (341)
Q Consensus 322 ~Aa~~v~~~g~~--~p~~~~ 339 (341)
+|+++|++.|+. +|+.++
T Consensus 281 ~aa~~v~~~G~~~~~~~~~~ 300 (317)
T 2nwh_A 281 AAAITVQSSFATSQDLSKDS 300 (317)
T ss_dssp HHHHHHSSTTCCGGGCCHHH
T ss_pred HHHHHHcCCCCCCCCCCHHH
Confidence 999999999995 456544
|
| >3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-45 Score=327.92 Aligned_cols=293 Identities=19% Similarity=0.189 Sum_probs=240.2
Q ss_pred CCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEE
Q 019448 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATS 82 (341)
Q Consensus 3 ~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~ 82 (341)
|++.+++.+++.+|+++.++ ++ .+++..+..+....+||++.|+|+++++ ||.++.
T Consensus 1 m~~i~~v~~n~~~D~~~~v~--------------------~~-~~g~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~ 56 (309)
T 3umo_A 1 MVRIYTLTLAPSLDSATITP--------------------QI-YPEGKLRCTAPVFEPGGGGINVARAIAH---LGGSAT 56 (309)
T ss_dssp CCCEEEECSSCEEEEEEEES--------------------CC-CSSSEEECCCCEEEEESHHHHHHHHHHH---TTCCEE
T ss_pred CCcEEEEecchhheEEEEcC--------------------cc-cCCCeEEeceeeecCCchHHHHHHHHHH---cCCCeE
Confidence 34456666889999999998 34 4566667778889999999999999998 469999
Q ss_pred EEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEe--CCccceeecccccccCCcccCCC-cchhhhhccce
Q 019448 83 YIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV--GGERSLVANLSAANCYKSEHLKK-PENWALVEKAK 159 (341)
Q Consensus 83 ~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~ 159 (341)
++|.+|+| +|+.+++.|+++||+++++...+ +|+.++.+.+ +|+++++...++ .++++++.. .+....+..++
T Consensus 57 ~i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~~~~~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~ 132 (309)
T 3umo_A 57 AIFPAGGA-TGEHLVSLLADENVPVATVEAKD-WTRQNLHVHVEASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIESGA 132 (309)
T ss_dssp EEEEECHH-HHHHHHHHHHHTTCCEEEEECSS-CCCCCEEEEETTTCCEEEEECCCC--CCCHHHHHHHHHHHTTSCTTC
T ss_pred EEEEecCc-hHHHHHHHHHHcCCceEEEEecC-CCeeEEEEEECCCCcEEEEEcCCC--CCCHHHHHHHHHHHHhcCCCC
Confidence 99999999 99999999999999999986543 4666655554 578877766664 366655532 01112246788
Q ss_pred EEEEecccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCC--cEEecCHHHHHHHhhhcCCCCCC
Q 019448 160 YFYIAGFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYM--DYIFGNETEARTFSKVQGWETDD 236 (341)
Q Consensus 160 ~v~i~~~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~--dvl~~n~~E~~~l~~~~~~~~~d 236 (341)
+++++++.. ..+.+.+.++++.++++++++++|+... .+.+++++. |++++|++|++.+++....+.++
T Consensus 133 ~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~v~~D~~~~--------~l~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~ 204 (309)
T 3umo_A 133 ILVISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGE--------ALSAALAIGNIELVKPNQKELSALVNRELTQPDD 204 (309)
T ss_dssp EEEEESCCCTTCCHHHHHHHHHHHHHTTCEEEEECCHH--------HHHHHTSSCCBSEECCBHHHHHHHHTSCCCSTTH
T ss_pred EEEEEccCCCCCCHHHHHHHHHHHHhcCCEEEEECCcH--------HHHHHhccCCCeEEEeCHHHHHHHhCCCCCCHHH
Confidence 999998643 4567899999999999999999999743 266788874 99999999999999865445567
Q ss_pred HHHHHHHHhcCCccccCCc-cEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHH
Q 019448 237 VEEIALKLSQWPKASEIRK-RTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEEC 315 (341)
Q Consensus 237 ~~~~~~~l~~~~~~~~~~~-~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a 315 (341)
..++++.+ .+.+. +.+|||+|++|++++++++.+++|++++ +++|++||||+|+|||+++|++|+++++|
T Consensus 205 ~~~~~~~l------~~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGD~f~a~~~~~l~~g~~~~~a 275 (309)
T 3umo_A 205 VRKAAQEI------VNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPV---KSQSTVGAGDSMVGAMTLKLAENASLEEM 275 (309)
T ss_dssp HHHHHHHH------HHTTSBSCEEEECGGGCEEEECSSCEEEECCCSC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHH------HHcCCCcEEEEEcCcccEEEEECCcEEEEeCCCc---CCCCCcChHHHHHHHHHHHHHcCCCHHHH
Confidence 88888888 56665 7899999999999998888888888654 89999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhccccCCCCCCC
Q 019448 316 VRAGCYTSHVIIQRSGCTYPEKPEF 340 (341)
Q Consensus 316 ~~~a~~~Aa~~v~~~g~~~p~~~~~ 340 (341)
+++|+++|+++|++.|+.+|+.+|+
T Consensus 276 ~~~A~~~aa~~v~~~G~~~~~~~ev 300 (309)
T 3umo_A 276 VRFGVAAGSAATLNQGTRLCSHDDT 300 (309)
T ss_dssp HHHHHHHHHHHTTSSTTCCCCHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCCCHHHH
Confidence 9999999999999999998887664
|
| >1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-45 Score=329.05 Aligned_cols=287 Identities=23% Similarity=0.341 Sum_probs=241.0
Q ss_pred CCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc-E
Q 019448 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA-T 81 (341)
Q Consensus 3 ~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~-v 81 (341)
|-++|+|+|++++|+++.++ ++|.+++..+..+....+||++.|+|+++++| |.+ +
T Consensus 13 ~~~~v~vvG~~~iD~~~~~~--------------------~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~L---G~~~~ 69 (311)
T 1vm7_A 13 MFLVISVVGSSNIDIVLKVD--------------------HFTKPGETQKAIEMNVFPGGKGANQAVTVAKI---GEKGC 69 (311)
T ss_dssp CCCCEEEECCCEEEEEEECS--------------------SCCCTTCEEECSEEEEEEECHHHHHHHHHHHH---HSSCE
T ss_pred ccCCEEEECcceeeEEEecc--------------------cCCCCCceEecCeeeecCCCHHHHHHHHHHHc---CCCce
Confidence 45689999999999999987 56666666677778889999999999999983 489 9
Q ss_pred EEEeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccce
Q 019448 82 SYIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAK 159 (341)
Q Consensus 82 ~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 159 (341)
.++|.+|+|.+|+.+++.|++.|| ++. .++.+|+.++++++ +|+++++.+.++...++++++. ...+.+++
T Consensus 70 ~~i~~vG~D~~G~~l~~~L~~~gV---~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~~~~~~----~~~~~~~~ 142 (311)
T 1vm7_A 70 RFVTCIGNDDYSDLLIENYEKLGI---TGYIRVSLPTGRAFIEVDKTGQNRIIIFPGANAELKKELID----WNTLSESD 142 (311)
T ss_dssp EEEEEECSSHHHHHHHHHHHHTTE---EEEEECSSCCCEEEEEECTTSCEEEEEECGGGGGCCGGGCC----HHHHTTCS
T ss_pred EEEEEECCChHHHHHHHHHHHCCC---EEEEcCCCCCeEEEEEECCCCCEEEEEecCccccCCHHHhC----hhhcccCC
Confidence 999999999999999999999999 453 45678999988887 5889888877777778887775 35678999
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHH
Q 019448 160 YFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEE 239 (341)
Q Consensus 160 ~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~ 239 (341)
++++++. .+.+.+..+ +++.+.++++||... .+...++++++|++++|++|++.|++....+.+++.+
T Consensus 143 ~v~~~~~---~~~~~~~~~---a~~~~~~v~~Dp~~~------~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~ 210 (311)
T 1vm7_A 143 ILLLQNE---IPFETTLEC---AKRFNGIVIFDPAPA------QGINEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEK 210 (311)
T ss_dssp EEEECSS---SCHHHHHHH---HHHCCSEEEECCCSC------TTCCGGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHH
T ss_pred EEEEeCC---CCHHHHHHH---HHHcCCEEEEeCcch------hhhhHHHHhhCCEEeCCHHHHHHHhCCCCCChhHHHH
Confidence 9999753 345544443 788899999999752 1224578899999999999999998754334567888
Q ss_pred HHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHH
Q 019448 240 IALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAG 319 (341)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a 319 (341)
+++.+ .+.|++.||||+|++|++++++++.+++|++++ +++||+||||+|+|||+++|++|+++++|+++|
T Consensus 211 ~~~~l------~~~g~~~vvvT~G~~G~~~~~~~~~~~~~~~~v---~~vdttGAGDaf~a~~~~~l~~g~~~~~a~~~A 281 (311)
T 1vm7_A 211 AAEKF------LELGVKNVIVKLGDKGVLLVNKNEKKHFPTFKV---KAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFG 281 (311)
T ss_dssp HHHHH------HHTTCSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHH------HHcCCCEEEEEECCCCeEEEeCCceEEecCCCc---ccCCCCccHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 89888 667899999999999999998888888887654 789999999999999999999999999999999
Q ss_pred HHHhhhhhhhccc--cCCCCCCC
Q 019448 320 CYTSHVIIQRSGC--TYPEKPEF 340 (341)
Q Consensus 320 ~~~Aa~~v~~~g~--~~p~~~~~ 340 (341)
+++|+.++++.|+ .+|+.+|+
T Consensus 282 ~~~aa~~v~~~G~~~~~p~~~ev 304 (311)
T 1vm7_A 282 TAAAAISVTRLGAQSSIPAREEV 304 (311)
T ss_dssp HHHHHHHTTSSSSGGGCCCHHHH
T ss_pred HHHHHHHhCcCCccccCCCHHHH
Confidence 9999999999998 47876653
|
| >2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-45 Score=328.47 Aligned_cols=284 Identities=19% Similarity=0.251 Sum_probs=231.4
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
+|+|+|++++|++...+ ++..+..+....+||++.|+|+++++ ||.++.++|
T Consensus 3 ~v~viG~~~~D~~~~~~-------------------------~~~~~~~~~~~~~GG~~~N~A~~la~---LG~~~~~i~ 54 (313)
T 2v78_A 3 DVIALGEPLIQFNSFNP-------------------------GPLRFVNYFEKHVAGSELNFCIAVVR---NHLSCSLIA 54 (313)
T ss_dssp CEEEECCCEEEEEESSS-------------------------SCGGGCCEEEEEEECHHHHHHHHHHH---TTCCEEEEE
T ss_pred eEEEECcceEEEecCCC-------------------------CcccccceeEecCCChHHHHHHHHHH---CCCcEEEEE
Confidence 79999999999987332 12334566788999999999999998 469999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeeeec-CCCCceeEEEE--Ee-CCccceeecc--cccccCCcccCCCcchhhhhccce
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYYED-ESASTGTCAVC--VV-GGERSLVANL--SAANCYKSEHLKKPENWALVEKAK 159 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~-~~~~t~~~~~~--~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~ 159 (341)
.+|+|.+|+.+++.|++.||+++++.. ++.+|+.+++. ++ +|+|+++.+. ++...++++++.. ..+++++
T Consensus 55 ~vG~D~~g~~~~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~~~g~~~~~~~~~~~a~~~l~~~~~~~----~~~~~~~ 130 (313)
T 2v78_A 55 RVGNDEFGKNIIEYSRAQGIDTSHIKVDNESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINE----NYVRNSR 130 (313)
T ss_dssp EEESSHHHHHHHHHHHHTTCBCTTEEEETTSCCCEEEEEESSSSTTCEEEEEECTTCSGGGCCGGGCCH----HHHHTSS
T ss_pred EeCCCHHHHHHHHHHHHcCCcCceEEEcCCCCceEEEEEEecCCCCCeeEEEeCCcChhHhCChhhCCH----HHhcCCC
Confidence 999999999999999999999998754 55689998877 65 6777765443 4556787777753 4578999
Q ss_pred EEEEeccccc---cCHHHHHHHHHHHHhCCCeEEEeCCc--hhHH--HHHHHHHHhhcCCCc--EEecCHHHHHHHhhhc
Q 019448 160 YFYIAGFFLT---VSPDSIQLVAEHAAANNKVFMMNLSA--PFIC--EFFKDALEKVLPYMD--YIFGNETEARTFSKVQ 230 (341)
Q Consensus 160 ~v~i~~~~~~---~~~~~~~~~~~~a~~~~~~v~~d~~~--~~~~--~~~~~~~~~~l~~~d--vl~~n~~E~~~l~~~~ 230 (341)
++|++++.+. .+.+.+.++++.++++ ++|+.. ..|. ...++.++++++++| ++++|++|++.|++
T Consensus 131 ~v~~~g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~~l~~~d~~il~~N~~E~~~l~g-- 204 (313)
T 2v78_A 131 LVHSTGITLAISDNAKEAVIKAFELAKSR----SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKILLD-- 204 (313)
T ss_dssp EEEEEHHHHHHCHHHHHHHHHHHHHCSSE----EEECCCCGGGSSCHHHHHHHHHHHHHHSCEEEEEECHHHHHHHHS--
T ss_pred EEEEcCchhhcChHHHHHHHHHHHHHHHh----CcCCcCChhhcCCHHHHHHHHHHHHHhcCeeEEECcHHHHHHHhC--
Confidence 9999987642 2346667777766654 667743 3332 234556778899999 99999999999987
Q ss_pred CCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCC
Q 019448 231 GWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK 310 (341)
Q Consensus 231 ~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~ 310 (341)
.++++++++++ .+.|++.+|||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+
T Consensus 205 ---~~~~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~~~~l~~g~ 272 (313)
T 2v78_A 205 ---VTDPDEAYRKY------KELGVKVLLYKLGSKGAIAYKDNVKAFKDAYKV---PVEDPTGAGDAMAGTFVSLYLQGK 272 (313)
T ss_dssp ---CCCHHHHHHHH------HHTTEEEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTC
T ss_pred ---CCCHHHHHHHH------HhCCCCEEEEEECCCCcEEeeCCcEEEeCCCcC---CccCCCCchHHHHHHHHHHHHcCC
Confidence 35788888888 567889999999999999998888888888755 789999999999999999999999
Q ss_pred CHHHHHHHHHHHhhhhhhhcccc--CCCCCC
Q 019448 311 PIEECVRAGCYTSHVIIQRSGCT--YPEKPE 339 (341)
Q Consensus 311 ~~~~a~~~a~~~Aa~~v~~~g~~--~p~~~~ 339 (341)
++++|+++|+++|+++|++.|+. +|+.+|
T Consensus 273 ~~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~ 303 (313)
T 2v78_A 273 DIEYSLAHGIAASTLVITVRGDNELTPTLED 303 (313)
T ss_dssp CHHHHHHHHHHHHHHHHTSSSSSTTCCCHHH
T ss_pred CHHHHHHHHHHHHHHHhccCCCCCCCCCHHH
Confidence 99999999999999999999995 576654
|
| >2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=326.72 Aligned_cols=291 Identities=19% Similarity=0.182 Sum_probs=231.9
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i 84 (341)
++|+|+|++++|++..++ + |..++..+..+....+||++.|+|+++++ ||.++.++
T Consensus 3 m~i~v~g~~~~D~~~~v~--------------------~-~~~g~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~~ 58 (323)
T 2f02_A 3 LIVTVTMNPSIDISYLLD--------------------H-LKLDTVNRTSQVTKTPGGKGLNVTRVIHD---LGGDVIAT 58 (323)
T ss_dssp CEEEEESSCEEEEEEECS--------------------C-CCTTSEEEESCEEEEEESHHHHHHHHHHH---HTCCEEEE
T ss_pred eEEEEecCceeEEEEecC--------------------C-cccCCEEEeceEEEcCCcHHHHHHHHHHH---cCCCeEEE
Confidence 489999999999999987 3 44555555667788999999999999998 35999999
Q ss_pred eeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCc--chhhhhccceEEE
Q 019448 85 GCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKP--ENWALVEKAKYFY 162 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~v~ 162 (341)
|.+|+ .+|+.+++.|++.||+++++...+ .|+.++.+++.++++.+...++ .++++++... .....+.++|+++
T Consensus 59 ~~vG~-~~G~~i~~~L~~~gV~~~~v~~~~-~t~~~~~~~~~~~~~~~~~~g~--~l~~~~~~~~~~~~~~~~~~~~~v~ 134 (323)
T 2f02_A 59 GVLGG-FHGAFIANELKKANIPQAFTSIKE-ETRDSIAILHEGNQTEILEAGP--TVSPEEISNFLENFDQLIKQAEIVT 134 (323)
T ss_dssp EEEEH-HHHHHHHHHHHHTTCCBCCEEESS-CCEEEEEEEETTEEEEEEECCC--BCCHHHHHHHHHHHHHHHTTCSEEE
T ss_pred EEecc-chHHHHHHHHHHCCCceeEEEcCC-CCeeEEEEEcCCCeEEEECCCC--CCCHHHHHHHHHHHHHhccCCCEEE
Confidence 99997 599999999999999999886544 4777777776445554444342 4565554320 1113468899999
Q ss_pred Eecccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhc---CCCcEEecCHHHHHHHhhhcCC-CC-CC
Q 019448 163 IAGFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVL---PYMDYIFGNETEARTFSKVQGW-ET-DD 236 (341)
Q Consensus 163 i~~~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l---~~~dvl~~n~~E~~~l~~~~~~-~~-~d 236 (341)
++++.+ ..+.+.+..+++.+++++.++++||.... +++++ +++|++++|++|++.|++.... +. ++
T Consensus 135 ~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~--------~~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~ 206 (323)
T 2f02_A 135 ISGSLAKGLPSDFYQELVQKAHAQEVKVLLDTSGDS--------LRQVLQGPWKPYLIKPNLEELEGLLGQDFSENPLAA 206 (323)
T ss_dssp EESCCCBTSCTTHHHHHHHHHHHTTCEEEEECCTHH--------HHHHHHSSCCCSEECCBHHHHHHHHTCCCCSSCHHH
T ss_pred EECCCCCCCChHHHHHHHHHHHHCCCEEEEECChHH--------HHHHHhccCCCeEEecCHHHHHHHhCCCCCCCcHHH
Confidence 988654 24567889999999999999999997542 33344 6999999999999999875321 12 34
Q ss_pred HHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHH
Q 019448 237 VEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECV 316 (341)
Q Consensus 237 ~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~ 316 (341)
+.++++++ .+.|++.+|||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|+
T Consensus 207 ~~~~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~a~~~~~l~~g~~~~~a~ 277 (323)
T 2f02_A 207 VQTALTKP------MFAGIEWIVISLGKDGAIAKHHDQFYRVKIPTI---QAKNPVGSGDATIAGLAYGLAKDAPAAELL 277 (323)
T ss_dssp HHHHHTSG------GGTTCSEEEEECGGGCEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHH------HHcCCCEEEEeecCCceEEEeCCCEEEEcCCCc---cccCCccHHHHHHHHHHHHHHcCCCHHHHH
Confidence 55566666 567899999999999999998888888887654 889999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhccccCCCCCCC
Q 019448 317 RAGCYTSHVIIQRSGCTYPEKPEF 340 (341)
Q Consensus 317 ~~a~~~Aa~~v~~~g~~~p~~~~~ 340 (341)
++|+++|+++|++.|+.+|+.+|+
T Consensus 278 ~~A~~~aa~~v~~~G~~~~~~~ev 301 (323)
T 2f02_A 278 KWGMAAGMANAQERMTGHVDVENV 301 (323)
T ss_dssp HHHHHHHHHHHHSSSSSCCCHHHH
T ss_pred HHHHHHHHHHHcCCCcCCCCHHHH
Confidence 999999999999999988876653
|
| >2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-44 Score=327.03 Aligned_cols=290 Identities=17% Similarity=0.202 Sum_probs=231.3
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
.++++|++++|++..+++ + ..++..+.......+||+++|+|+++++ ||.++.++|
T Consensus 22 i~~v~G~~~~D~~~~~~~--------------------~-~~g~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~i~ 77 (330)
T 2jg1_A 22 ILTLTLNPSVDISYPLTA--------------------L-KLDDVNRVQEVSKTAGGKGLNVTRVLAQ---VGEPVLASG 77 (330)
T ss_dssp EEEEESSCEEEEEEEESC--------------------C-CTTSEEEESCCEEEEECHHHHHHHHHHH---HTCCEEEEE
T ss_pred EEEEecchhheEEEecCC--------------------c-cCCceEEeceEEEcCCchHHHHHHHHHH---hCCCeEEEE
Confidence 678999999999999872 2 3334444466788999999999999998 359999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCc--chhhhhccceEEEE
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKP--ENWALVEKAKYFYI 163 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~v~i 163 (341)
.+|+ .+|+.+++.|++.||+++++...+ .|+.++.+++.++++.+...++ .+++++++.. .....++++|++|+
T Consensus 78 ~vG~-~~G~~l~~~L~~~gV~~~~v~~~~-~t~~~~~~v~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~v~~ 153 (330)
T 2jg1_A 78 FIGG-ELGQFIAKKLDHADIKHAFYNIKG-ETRNCIAILHEGQQTEILEQGP--EIDNQEAAGFIKHFEQMMEKVEAVAI 153 (330)
T ss_dssp EEEH-HHHHHHHHHHHHTTCEECCEEESS-CCEEEEEEEETTEEEEEEECCC--BCCHHHHHHHHHHHHHHGGGCSEEEE
T ss_pred Eecc-hhHHHHHHHHHHCCCceeEEEccC-CCeeEEEEEeCCCcEEEECCCC--CCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 9997 699999999999999999986544 4777777777555554444332 4555554320 01134688999999
Q ss_pred ecccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC---CCcEEecCHHHHHHHhhhcCC-CCCCHH
Q 019448 164 AGFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP---YMDYIFGNETEARTFSKVQGW-ETDDVE 238 (341)
Q Consensus 164 ~~~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~---~~dvl~~n~~E~~~l~~~~~~-~~~d~~ 238 (341)
+++.+ ..+.+.+..+++.+++++.++++|+... .++++++ ++|++++|++|++.|++.... +.+++.
T Consensus 154 ~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~--------~l~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~ 225 (330)
T 2jg1_A 154 SGSLPKGLNQDYYAQIIERCQNKGVPVILDCSGA--------TLQTVLENPYKPTVIKPNISELYQLLNQPLDESLESLK 225 (330)
T ss_dssp ESCCCBTSCTTHHHHHHHHHHTTTCCEEEECCHH--------HHHHHHTSSSCCSEECCBHHHHHHHTTSCCCCCHHHHH
T ss_pred ECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCcH--------HHHHHHhccCCceEEEeCHHHHHHHhCCCCCCCHHHHH
Confidence 88654 3456789999999999999999999743 2455665 899999999999999874321 123455
Q ss_pred HHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHH
Q 019448 239 EIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRA 318 (341)
Q Consensus 239 ~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~ 318 (341)
++++.+ .+.|++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|+++
T Consensus 226 ~~~~~l------~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~~~~l~~g~~l~~al~~ 296 (330)
T 2jg1_A 226 QAVSQP------LFEGIEWIIVSLGAQGAFAKHNHTFYRVNIPTI---SVLNPVGSGDSTVAGITSAILNHENDHDLLKK 296 (330)
T ss_dssp HHHHSG------GGTTCSEEEEECGGGCEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHH------HHcCCCEEEEeecCCceEEEeCCCEEEEeCCCc---cccCCCcHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 666666 567899999999999999998888888887654 89999999999999999999999999999999
Q ss_pred HHHHhhhhhhhccccCCCCCCC
Q 019448 319 GCYTSHVIIQRSGCTYPEKPEF 340 (341)
Q Consensus 319 a~~~Aa~~v~~~g~~~p~~~~~ 340 (341)
|+++|+++|++.|+.+|+.+|+
T Consensus 297 A~a~aa~~v~~~G~~~~~~~ev 318 (330)
T 2jg1_A 297 ANTLGMLNAQEAQTGYVNLNNY 318 (330)
T ss_dssp HHHHHHHHHTSSSSSCCCGGGH
T ss_pred HHHHHHHHhcCcCCCCCCHHHH
Confidence 9999999999999988887764
|
| >2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=324.83 Aligned_cols=284 Identities=19% Similarity=0.229 Sum_probs=231.6
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i 84 (341)
++|+|+|++++|++...+ ++..+..+....+||++.|+|+++++ ||.++.++
T Consensus 2 ~~v~viG~~~~D~~~~~~-------------------------~~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~~ 53 (311)
T 2dcn_A 2 AKLITLGEILIEFNALSP-------------------------GPLRHVSYFEKHVAGSEANYCVAFIK---QGNECGII 53 (311)
T ss_dssp CEEEEESCCEEEEEESSS-------------------------SCGGGCCEEEEEEECHHHHHHHHHHH---TTCEEEEE
T ss_pred CCEEEECCceEEEecCCC-------------------------CcccccceeeecCCChHHHHHHHHHH---CCCceEEE
Confidence 479999999999987332 12244566788999999999999998 46999999
Q ss_pred eeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCc--cceeecc--cccccCCcccCCCcchhhhhccc
Q 019448 85 GCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGE--RSLVANL--SAANCYKSEHLKKPENWALVEKA 158 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~--~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~ 158 (341)
|.+|+|.+|+.+++.|++.||+++++. .++.+|+.+++.++ +|+ |+++.+. ++...++++++.. ..+.++
T Consensus 54 ~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~ 129 (311)
T 2dcn_A 54 AKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDE----EYVKSA 129 (311)
T ss_dssp CEEESSHHHHHHHHHHHHTTCBCTTCEEETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCH----HHHTTC
T ss_pred EEeCCCHHHHHHHHHHHHcCCCcceEEEcCCCCceEEEEEECCCCCccceEEEecCcChhhhCChhhcCh----HHHcCC
Confidence 999999999999999999999999875 45668988888776 677 7765443 4556787777653 457899
Q ss_pred eEEEEeccccc---cCHHHHHHHHHHHHhCCCeEEEeCCc--hhHH-HHHHHHHHhhcC--CCcEEecCHHHHHHHhhhc
Q 019448 159 KYFYIAGFFLT---VSPDSIQLVAEHAAANNKVFMMNLSA--PFIC-EFFKDALEKVLP--YMDYIFGNETEARTFSKVQ 230 (341)
Q Consensus 159 ~~v~i~~~~~~---~~~~~~~~~~~~a~~~~~~v~~d~~~--~~~~-~~~~~~~~~~l~--~~dvl~~n~~E~~~l~~~~ 230 (341)
+++|++++.+. .+.+.+.++++.++++ ++|+.. ..|. ....+.++++++ ++|++++|++|++.|++
T Consensus 130 ~~v~~~g~~~~~~~~~~~~~~~~~~~a~~~----~~D~~~~~~~~~~~~~~~~~~~~l~~~~~dil~~N~~E~~~l~g-- 203 (311)
T 2dcn_A 130 DLVHSSGITLAISSTAKEAVYKAFEIASNR----SFDTNIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKIILG-- 203 (311)
T ss_dssp SEEEEEHHHHHSCHHHHHHHHHHHHHCSSE----EEECCCCTTTSCHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHS--
T ss_pred CEEEEeCcccccChHHHHHHHHHHHHHHHh----CcCccCchhhCChHHHHHHHHHHHhhcCCcEEECCHHHHHHHhC--
Confidence 99999987642 2346677777776655 667753 3342 223456778899 99999999999999987
Q ss_pred CCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCC
Q 019448 231 GWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK 310 (341)
Q Consensus 231 ~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~ 310 (341)
.++++++++++ .+. ++.+|||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+
T Consensus 204 ---~~~~~~~~~~l------~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~ 270 (311)
T 2dcn_A 204 ---ESDPDKAAKAF------SDY-AEIIVMKLGPKGAIVYYDGKKYYSSGYQV---PVEDVTGAGDALGGTFLSLYYKGF 270 (311)
T ss_dssp ---CCCHHHHHHHH------TTT-EEEEEEEEETTEEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHTTTC
T ss_pred ---CCCHHHHHHHH------HHh-CCEEEEEECCCCcEEEeCCcEEEeCCccc---cccCCCCchHHHHHHHHHHHHcCC
Confidence 35788888888 566 88999999999999999888888887755 799999999999999999999999
Q ss_pred CHHHHHHHHHHHhhhhhhhcccc--CCCCCC
Q 019448 311 PIEECVRAGCYTSHVIIQRSGCT--YPEKPE 339 (341)
Q Consensus 311 ~~~~a~~~a~~~Aa~~v~~~g~~--~p~~~~ 339 (341)
++++|+++|+++|++++++.|+. +|+.+|
T Consensus 271 ~~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~ 301 (311)
T 2dcn_A 271 EMEKALDYAIVASTLNVMIRGDQENLPTTKD 301 (311)
T ss_dssp CHHHHHHHHHHHHHHHTTSSSSSTTCCCHHH
T ss_pred CHHHHHHHHHHHHHHHhccCCCCCCCCCHHH
Confidence 99999999999999999999985 577654
|
| >1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-45 Score=331.41 Aligned_cols=285 Identities=19% Similarity=0.294 Sum_probs=224.6
Q ss_pred CCCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 1 MAQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 1 ~~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
||++.+|+|+|++++|++... .......+||+++|+|+++++ ||.+
T Consensus 21 ~~~m~~ilviG~~~~D~~~~~-------------------------------~~~~~~~~GG~~~NvA~~la~---LG~~ 66 (339)
T 1tyy_A 21 MKAMNKVWVIGDASVDLVPEK-------------------------------QNSYLKCPGGASANVGVCVAR---LGGE 66 (339)
T ss_dssp ----CCEEEESCCEEEEEECS-------------------------------SSEEEEEEECHHHHHHHHHHH---TTCC
T ss_pred ccccCCEEEECcceeEEeccC-------------------------------CCceEEcCCCHHHHHHHHHHH---cCCC
Confidence 566679999999999998742 133467999999999999998 4699
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeeec-CCCCceeEEEEEe-CCccceeecc--cccccCCcccCCCcchhhhhc
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYED-ESASTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKKPENWALVE 156 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~-~~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~ 156 (341)
+.++|.+|+|.+|+.+++.|++.||+++++.. ++.+|+.+++.++ +|+|++..+. +++..++++.. ..+.
T Consensus 67 ~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~------~~l~ 140 (339)
T 1tyy_A 67 CGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQDL------PPFR 140 (339)
T ss_dssp EEEEEEECSSHHHHHHHHHHHTTTEECTTEEECTTSCCCEEEEC-------CEEECCSSCGGGGCCGGGC------CCCC
T ss_pred eEEEEeeCCCHHHHHHHHHHHHcCCCchheEecCCCCCeEEEEEEcCCCCeEEEEecCCChhhhCCcchh------hHhc
Confidence 99999999999999999999999999998854 5667888877766 6888765543 45445555422 3477
Q ss_pred cceEEEEecccc--ccCHHHHHHHHHHHHhCCCeEEEeCCch--hHH--HHHHHHHHhhcCCCcEEecCHHHHHHHhhhc
Q 019448 157 KAKYFYIAGFFL--TVSPDSIQLVAEHAAANNKVFMMNLSAP--FIC--EFFKDALEKVLPYMDYIFGNETEARTFSKVQ 230 (341)
Q Consensus 157 ~~~~v~i~~~~~--~~~~~~~~~~~~~a~~~~~~v~~d~~~~--~~~--~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~ 230 (341)
++|+++++++.+ ..+.+.+..+++.+++++.++++|+... .|. ....+.++++++++|++++|++|++.|++.
T Consensus 141 ~~~~v~~~~~~l~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~- 219 (339)
T 1tyy_A 141 QYEWFYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGA- 219 (339)
T ss_dssp TTCEEEEEHHHHSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHCC-
T ss_pred cCCEEEEcchhhcCcccHHHHHHHHHHHHHcCCEEEEeCCCCccccCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCC-
Confidence 899999988653 2345778899999999999999999632 221 123455778899999999999999999873
Q ss_pred CCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcC-
Q 019448 231 GWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE- 309 (341)
Q Consensus 231 ~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g- 309 (341)
++++++++++ .+.|++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|
T Consensus 220 ----~~~~~~~~~l------~~~g~~~VvvT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~~~~l~~g~ 286 (339)
T 1tyy_A 220 ----SHWQDARYYL------RDLGCDTTIISLGADGALLITAEGEFHFPAPRV---DVVDTTGAGDAFVGGLLFTLSRAN 286 (339)
T ss_dssp ----SSGGGGSSTT------GGGTCSCEEEECGGGCEEEESSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHTTSS
T ss_pred ----CCHHHHHHHH------HHcCCCEEEEEECCCceEEEeCCceEEcCCCCC---CcCCCCCchHHHHHHHHHHHHhcc
Confidence 3455666655 566889999999999999998888888887654 79999999999999999999997
Q ss_pred ----CCHHHHHHHHHHHhhhhhhhccc--cCCCCCC
Q 019448 310 ----KPIEECVRAGCYTSHVIIQRSGC--TYPEKPE 339 (341)
Q Consensus 310 ----~~~~~a~~~a~~~Aa~~v~~~g~--~~p~~~~ 339 (341)
+++++|+++|+++|+++|++.|+ .+|+.+|
T Consensus 287 ~~~~~~l~~a~~~A~a~aa~~v~~~G~~~~~p~~~e 322 (339)
T 1tyy_A 287 CWDHALLAEAISNANACGAMAVTAKGAMTALPFPDQ 322 (339)
T ss_dssp SCCHHHHHHHHHHHHHHHHHGGGSSSTTTTCCCHHH
T ss_pred ccccccHHHHHHHHHHHHHHHhCCCCCCCCCCCHHH
Confidence 89999999999999999999998 5576654
|
| >1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-44 Score=321.50 Aligned_cols=281 Identities=20% Similarity=0.282 Sum_probs=227.9
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
+|+++|++++|++...+ ++..+..+....+||++.|+|+++++ ||.++.++|
T Consensus 3 ~i~viG~~~~D~~~~~~-------------------------~~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~~~ 54 (309)
T 1v1a_A 3 EVVTAGEPLVALVPQEP-------------------------GHLRGKRLLEVYVGGAEVNVAVALAR---LGVKVGFVG 54 (309)
T ss_dssp SEEEESCCEEEEECSSS-------------------------SCGGGCCEEEEEEECHHHHHHHHHHH---HTCCEEEEE
T ss_pred cEEEEccceEEEecCCC-------------------------CcccchheeeeecCcHHHHHHHHHHH---cCCCeEEEE
Confidence 79999999999986332 12234556778999999999999998 359999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecc--cccccCCcccCCCcchhhhhccceEE
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKKPENWALVEKAKYF 161 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~v 161 (341)
.+|+|.+|+.+++.|++.||+++++. .++ +|+.+++..+ +|+++++.+. ++...++++++.. ..+.+++++
T Consensus 55 ~vG~D~~g~~i~~~L~~~gv~~~~v~~~~~-~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~v 129 (309)
T 1v1a_A 55 RVGEDELGAMVEERLRAEGVDLTHFRRAPG-FTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDP----DYLEGVRFL 129 (309)
T ss_dssp EECSSHHHHHHHHHHHHHTCBCTTEEECSS-CCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCG----GGGTTCSEE
T ss_pred EeCCCHHHHHHHHHHHHcCCCCceEEEcCC-CCEEEEEEECCCCCceEEEeCCCChhhhCCHhhCCh----hHhcCCCEE
Confidence 99999999999999999999999885 445 8888887775 6777765443 4556777777653 457899999
Q ss_pred EEeccccc---cCHHHHHHHHHHHHhCCCeEEEeCCc--hhHH-HHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCC
Q 019448 162 YIAGFFLT---VSPDSIQLVAEHAAANNKVFMMNLSA--PFIC-EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETD 235 (341)
Q Consensus 162 ~i~~~~~~---~~~~~~~~~~~~a~~~~~~v~~d~~~--~~~~-~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~ 235 (341)
|++++.+. .+.+.+..+++.+++++.++++|+.. ..|. ....+.+.++++++|++++|++|++.|++..
T Consensus 130 ~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~----- 204 (309)
T 1v1a_A 130 HLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSPEEARGFLERALPGVDLLFLSEEEAELLFGRV----- 204 (309)
T ss_dssp EEETTGGGSCHHHHHHHHHHHHHHHTTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEEEEHHHHHHHHSSH-----
T ss_pred EEeCchhccCchHHHHHHHHHHHHHHcCCEEEEeCCCCcccCCHHHHHHHHHHHHHhCCEEECcHHHHHHHhCCH-----
Confidence 99998753 34567888999999999999999964 2232 2344567889999999999999999998631
Q ss_pred CHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEEC-CeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHH
Q 019448 236 DVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQD-GKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEE 314 (341)
Q Consensus 236 d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~-~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~ 314 (341)
+++++ +.|++.||||+|++|+++ ++ ++.+++|++++ +++|||||||+|+|||+++|++|+++++
T Consensus 205 --~~~~~---------~~g~~~vvvt~G~~G~~~-~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~~~ 269 (309)
T 1v1a_A 205 --EEALR---------ALSAPEVVLKRGAKGAWA-FVDGRRVEGSAFAV---EAVDPVGAGDAFAAGYLAGAVWGLPVEE 269 (309)
T ss_dssp --HHHHH---------HTCCSEEEEECGGGCEEE-EETTEEEECCCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHH
T ss_pred --HHHHH---------hcCCCEEEEEecCCCeeE-ecCCcEEEeCCCCC---CcCCCCCchHHHHHHHHHHHHcCCCHHH
Confidence 34443 236789999999999988 55 67788887654 7899999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhcccc--CCCCCC
Q 019448 315 CVRAGCYTSHVIIQRSGCT--YPEKPE 339 (341)
Q Consensus 315 a~~~a~~~Aa~~v~~~g~~--~p~~~~ 339 (341)
|+++|+++|++++++.|+. +|+.+|
T Consensus 270 a~~~a~~~aa~~v~~~G~~~~~~~~~~ 296 (309)
T 1v1a_A 270 RLRLANLLGASVAASRGDHEGAPYRED 296 (309)
T ss_dssp HHHHHHHHHHHHHTSSTTTTTCCCHHH
T ss_pred HHHHHHHHHHHHHcCCCCCcCCCCHHH
Confidence 9999999999999999984 576654
|
| >3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-44 Score=321.92 Aligned_cols=288 Identities=17% Similarity=0.163 Sum_probs=226.1
Q ss_pred EE-EEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 7 LL-GMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 7 v~-~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
|+ +.|++.+|+++.++ + |.+++..+..+....+||++.|+|+++++ ||.++.++|
T Consensus 4 I~~v~g~~~~D~~~~~~--------------------~-~~~g~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~i~ 59 (309)
T 3cqd_A 4 IYTLTLAPSLDSATITP--------------------Q-IYPEGKLRCTAPVFEPGGGGINVARAIAH---LGGSATAIF 59 (309)
T ss_dssp EEEECSSCEEEEEEEES--------------------C-CCSSSEEECCCCEEEEESHHHHHHHHHHH---TTCCEEEEE
T ss_pred EEEEeccchheEEEEcC--------------------C-CcCCCeeeccceeecCCchHHHHHHHHHH---cCCCeEEEE
Confidence 55 66799999999987 2 34444555567788999999999999998 469999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEE-Ee-CCccceeecccccccCCcccCCCc--chhhhhccceEE
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVC-VV-GGERSLVANLSAANCYKSEHLKKP--ENWALVEKAKYF 161 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~-~~-~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~v 161 (341)
.+|+| +|+.+++.|++.||+++++...+ .|+.++.+ ++ +|+++++...++ .++++++... .....+++ +++
T Consensus 60 ~vG~d-~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~~~~~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~-~~v 134 (309)
T 3cqd_A 60 PAGGA-TGEHLVSLLADENVPVATVEAKD-WTRQNLHVHVEASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIESG-AIL 134 (309)
T ss_dssp EECHH-HHHHHHHHHHHTTCCEEEEECSS-CCCCCEEEEETTTCCEEEEECCCC--CCCHHHHHHHHHHHHTSCTT-CEE
T ss_pred EecCc-hHHHHHHHHHHcCCCceeEEcCC-CCeeEEEEEEcCCCCEEEEEcCCC--CCCHHHHHHHHHHHHHhhcC-CEE
Confidence 99998 99999999999999999986544 36666666 65 677766555443 3555544320 01133677 999
Q ss_pred EEecccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHh-hcCCC-cEEecCHHHHHHHhhhcCCCCCCHH
Q 019448 162 YIAGFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEK-VLPYM-DYIFGNETEARTFSKVQGWETDDVE 238 (341)
Q Consensus 162 ~i~~~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~-~l~~~-dvl~~n~~E~~~l~~~~~~~~~d~~ 238 (341)
|++++.+ ..+.+.+..+++.+++++.++++||.... +++ +.+++ |++++|++|++.|++....+.+++.
T Consensus 135 ~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~--------~~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~ 206 (309)
T 3cqd_A 135 VISGSLPPGVKLEKLTQLISAAQKQGIRCIVDSSGEA--------LSAALAIGNIELVKPNQKELSALVNRELTQPDDVR 206 (309)
T ss_dssp EEESCCCTTCCHHHHHHHHHHHHTTTCEEEEECCHHH--------HHHHTTTCCBSEECCBHHHHHHHHTSCCCSTTHHH
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHcCCeEEEECChHH--------HHHHHHhCCCEEEeeCHHHHHHHhCCCCCCHHHHH
Confidence 9998653 34568899999999999999999997532 333 33788 9999999999999886544445677
Q ss_pred HHHHHHhcCCccccCC-ccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHH
Q 019448 239 EIALKLSQWPKASEIR-KRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVR 317 (341)
Q Consensus 239 ~~~~~l~~~~~~~~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~ 317 (341)
++++.+ .+.| ++.+|||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|++
T Consensus 207 ~~~~~l------~~~g~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vdttGAGDaf~a~~~~~l~~g~~~~~a~~ 277 (309)
T 3cqd_A 207 KAAQEI------VNSGKAKRVVVSLGPQGALGVDSENCIQVVPPPV---KSQSTVGAGDSMVGAMTLKLAENASLEEMVR 277 (309)
T ss_dssp HHHHHH------HHTTSBSCEEEECGGGCEEEECSSCEEEECCCSC---CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHH------HHcCCCCEEEEEecCCceEEEECCceEEEeCCcc---ccCCCcCcHHHHHHHHHHHHHcCCCHHHHHH
Confidence 888888 5667 88999999999999998877888887654 8999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhccccCCCCCCC
Q 019448 318 AGCYTSHVIIQRSGCTYPEKPEF 340 (341)
Q Consensus 318 ~a~~~Aa~~v~~~g~~~p~~~~~ 340 (341)
+|+++|+.++++.|+.+|+.+|+
T Consensus 278 ~A~~~aa~~~~~~G~~~~~~~~v 300 (309)
T 3cqd_A 278 FGVAAGSAATLNQGTRLCSHDDT 300 (309)
T ss_dssp HHHHHHHHHTC-----CCCHHHH
T ss_pred HHHHHHHHHHcCcCCCCCCHHHH
Confidence 99999999999999988876653
|
| >4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-44 Score=328.02 Aligned_cols=296 Identities=16% Similarity=0.147 Sum_probs=217.9
Q ss_pred CCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcE
Q 019448 2 AQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGAT 81 (341)
Q Consensus 2 ~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v 81 (341)
+||++|++||++++|+...-+ .......+...++||+++|+|++|++ ||.++
T Consensus 22 ~mm~kv~~~GE~m~~l~p~~~-------------------------~~~~~~~~~~~~~GG~~aNvA~~lar---LG~~~ 73 (351)
T 4gm6_A 22 SMMKQVVTIGELLMRLSTQQG-------------------------IPFSQTTALDIHIGGAEANVAVNLSK---LGHPT 73 (351)
T ss_dssp ---CEEEEECCCEEEEECCTT-------------------------CCGGGCSEEEEEEECHHHHHHHHHHH---TTCCE
T ss_pred hccCCEEEEcceeEEecCCCC-------------------------CCccccCeEEEecCChHHHHHHHHHH---cCCCe
Confidence 355799999999999876332 12344566788999999999999998 56999
Q ss_pred EEEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEE-eCCccceeecccccc---cCCcccCCCcchhhhhcc
Q 019448 82 SYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCV-VGGERSLVANLSAAN---CYKSEHLKKPENWALVEK 157 (341)
Q Consensus 82 ~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~-~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~ 157 (341)
.|+|.||+|.+|+.+++.|+++||+++++...+..++.+++.. +++....+.+..... ...+.++. ..+.+++
T Consensus 74 ~~ig~vG~D~~G~~l~~~L~~~GVdt~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~d~~---~~~~~~~ 150 (351)
T 4gm6_A 74 RIATVVPANPIGKMAVEHLWRHQVDTAFVVEAGDRLGTYYLESGTALKAPSVVYDRQHSSFARHKSMDWD---LSELLKG 150 (351)
T ss_dssp EEEEEECSSHHHHHHHHHHHHTTEECTTEEECSSCCCEEEEECCBTTBCCEEEEECTTCHHHHCCCCCCC---HHHHHTT
T ss_pred EEEEEeCCCHHHHHHHHHHHHcCCCcccccccCCccceeEEEEccCCcceEEEEccccchhhhCCccccC---HHHHHhh
Confidence 9999999999999999999999999999865544455544444 343333333322221 33333332 2356889
Q ss_pred ceEEEEeccccccC---HHHHHHHHHHHHhCCCeEEEeCC--chhHH-HHHHHHHHhhcCCCcEEecCHHHHHHHhhhcC
Q 019448 158 AKYFYIAGFFLTVS---PDSIQLVAEHAAANNKVFMMNLS--APFIC-EFFKDALEKVLPYMDYIFGNETEARTFSKVQG 231 (341)
Q Consensus 158 ~~~v~i~~~~~~~~---~~~~~~~~~~a~~~~~~v~~d~~--~~~~~-~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~ 231 (341)
++++|++++.+..+ .+.+.++++.++++|+++++|+. +..|. +..++.++++++++|++++|++|+..+++...
T Consensus 151 ~~~~~~~g~~l~~~~~~~~~~~~~~~~ak~~g~~v~~D~n~r~~lw~~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~ 230 (351)
T 4gm6_A 151 IRVLHVSGITIALSTFWLEMVVKIIREAKRNGIKISFDMNYRAKLWELEAAKRAYQQLLPLVDYCSAGQMDAVAFFEISS 230 (351)
T ss_dssp EEEEEEEHHHHHHCHHHHHHHHHHHHHHHHTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCT
T ss_pred cccceecccchhhchhHHHHHHHHHHHHHHcCCCcccCCCcCchhhhhhhHHHHHHHHHHhCCccccCHHHHHHHhCCCC
Confidence 99999998775433 46788999999999999999884 44454 33566788999999999999999999987543
Q ss_pred CCCCCHHHH-HHHHhcCCccccCCccEEEEEeC--CCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhc
Q 019448 232 WETDDVEEI-ALKLSQWPKASEIRKRTAVITQG--ADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQ 308 (341)
Q Consensus 232 ~~~~d~~~~-~~~l~~~~~~~~~~~~~vvvt~G--~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~ 308 (341)
.. .+..+. .+...... ...+.+..+++.+ ..++.++..++.++.+++++ .+++|||||||+|+|||+++|++
T Consensus 231 ~~-~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~VvDttGAGDaF~ag~l~~l~~ 305 (351)
T 4gm6_A 231 ET-TDYYQAMHDKYPNIE--LFYATKRTVISASHHLLQGHLWTQGECWESEEYAI--YPIVDRVGGGDAYTAAVLHGILS 305 (351)
T ss_dssp TC-SCHHHHHHHHCTTCC--EEEEEEEEEEETTEEEEEEEEEETTEEEEEEEEEE--CSCSCCTTHHHHHHHHHHHHHHT
T ss_pred ch-hHHHHHHHhhhhhhh--hhhccccceeeeccCCceEEEEeCCceEEeCCCCC--CCcCCCCChhHHHHHHHHHHHHC
Confidence 22 333333 33321110 1123344555544 34667788888888887765 37899999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhhhhhhcccc
Q 019448 309 EKPIEECVRAGCYTSHVIIQRSGCT 333 (341)
Q Consensus 309 g~~~~~a~~~a~~~Aa~~v~~~g~~ 333 (341)
|+++++|+++|+++||++|+++|+.
T Consensus 306 g~~~~~al~~A~aaaal~v~~~Ga~ 330 (351)
T 4gm6_A 306 EWRPDETVKFATAAAGLKHSIHGDI 330 (351)
T ss_dssp TCCHHHHHHHHHHHHHHHTTSSSSS
T ss_pred CCCHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999999984
|
| >3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-44 Score=323.68 Aligned_cols=287 Identities=20% Similarity=0.199 Sum_probs=234.4
Q ss_pred ceEEEEcCceeee-EeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEE
Q 019448 5 GILLGMGNPLLDI-SSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSY 83 (341)
Q Consensus 5 ~~v~~iG~~~lD~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~ 83 (341)
+.+++.+++.+|+ ++.++ ++ .+++..+.......+||++.|+|+++++ ||.++.+
T Consensus 3 mi~tvt~np~iD~~~~~v~--------------------~~-~~g~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~ 58 (320)
T 3ie7_A 3 LIYTITLNPAIDRLLFIRG--------------------EL-EKRKTNRVIKTEFDCGGKGLHVSGVLSK---FGIKNEA 58 (320)
T ss_dssp CEEEEESSCEEEEEEEESS--------------------SC-CTTSCCCCSEEEEEEESHHHHHHHHHHH---HTCCEEE
T ss_pred eEEEEecchHHeeeEEEcC--------------------Cc-cCCCeeEeceeeecCCchHHHHHHHHHH---cCCCeEE
Confidence 3688999999999 99997 34 5566666777889999999999999998 3599999
Q ss_pred EeeeecCchhHHHHHHHHhcCcceeee-ecCCCCceeEEEEEeCCc--cceeecccccccCCcccCCC--cchhhhhccc
Q 019448 84 IGCIGKDKFGEEMKKNSKLAGVNVHYY-EDESASTGTCAVCVVGGE--RSLVANLSAANCYKSEHLKK--PENWALVEKA 158 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~-~~~~~~t~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~ 158 (341)
+|.+|+| +|+.+++.|++.||+++++ ...+ +|+.+++++++|+ |+++...+ ..++++++.. ......+.++
T Consensus 59 i~~vG~d-~g~~i~~~l~~~gv~~~~v~~~~~-~t~~~~~~~~~g~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~ 134 (320)
T 3ie7_A 59 LGIAGSD-NLDKLYAILKEKHINHDFLVEAGT-STRECFVVLSDDTNGSTMIPEAG--FTVSQTNKDNLLKQIAKKVKKE 134 (320)
T ss_dssp EEEEEST-THHHHHHHHHHTTCCBCCEEETTC-CCEEEEEEEETTCSCCEEEECCC--CCCCHHHHHHHHHHHHHHCCTT
T ss_pred EEEecCc-hHHHHHHHHHHcCCceEEEEecCC-CCceEEEEEECCCceeEEEeCCC--CCCCHHHHHHHHHHHHHHhcCC
Confidence 9999998 9999999999999999998 5554 8999988888888 77765544 3455555432 1122467899
Q ss_pred eEEEEecccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC-CCcEEecCHHHHHHHhhhcCCCCCC
Q 019448 159 KYFYIAGFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP-YMDYIFGNETEARTFSKVQGWETDD 236 (341)
Q Consensus 159 ~~v~i~~~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~-~~dvl~~n~~E~~~l~~~~~~~~~d 236 (341)
|+++++++.+ ..+.+.+..+++.++++++++++|+.... +.+.+. ++|++++|++|++.|++... ..
T Consensus 135 ~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~--------l~~~l~~~~dil~~N~~E~~~l~g~~~---~~ 203 (320)
T 3ie7_A 135 DMVVIAGSPPPHYTLSDFKELLRTVKATGAFLGCDNSGEY--------LNLAVEMGVDFIKPNEDEVIAILDEKT---NS 203 (320)
T ss_dssp CEEEEESCCCTTCCHHHHHHHHHHHHHHTCEEEEECCHHH--------HHHHHHHCCSEECCBTTGGGGGSCTTC---CC
T ss_pred CEEEEeCCCCCCCCHHHHHHHHHHHHhcCCEEEEECChHH--------HHHHHhcCCeEEeeCHHHHHHHhCCCc---CC
Confidence 9999988653 34568899999999999999999997532 444454 99999999999999987421 21
Q ss_pred HHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHH
Q 019448 237 VEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECV 316 (341)
Q Consensus 237 ~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~ 316 (341)
..+.+.++ ... ++.+|||+|++|++++++++.+++|++++ +++|++||||+|+|||+++|++|+++++|+
T Consensus 204 ~~~~~~~~------~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~ag~~~~l~~g~~~~~a~ 273 (320)
T 3ie7_A 204 LEENIRTL------AEK-IPYLVVSLGAKGSICAHNGKLYQVIPPKV---QERNDTGAGDVFVGAFIAGLAMNMPITETL 273 (320)
T ss_dssp HHHHHHHH------TTT-CSEEEEECGGGCEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred CHHHHHHH------Hhh-CCEEEEEcCCCceEEEeCCcEEEEeCCcc---CCCCCcCchHHHHHHHHHHHHcCCCHHHHH
Confidence 23334444 223 78999999999999999999999988755 899999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhccccCCCCCCC
Q 019448 317 RAGCYTSHVIIQRSGCTYPEKPEF 340 (341)
Q Consensus 317 ~~a~~~Aa~~v~~~g~~~p~~~~~ 340 (341)
++|+++|+++|++.|+.+|+.+|+
T Consensus 274 ~~A~a~aa~~v~~~G~~~~~~~ev 297 (320)
T 3ie7_A 274 KVATGCSASKVMQQDSSSFDLEAA 297 (320)
T ss_dssp HHHHHHHHHHHTSSSSSCCCHHHH
T ss_pred HHHHHHHHHHHhCcCCCCCCHHHH
Confidence 999999999999999988887654
|
| >4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=331.21 Aligned_cols=294 Identities=18% Similarity=0.184 Sum_probs=230.1
Q ss_pred CCceEEEEcCceeeeEee--cChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc
Q 019448 3 QEGILLGMGNPLLDISSV--VDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA 80 (341)
Q Consensus 3 ~~~~v~~iG~~~lD~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~ 80 (341)
++++|+|+|++++|++.. ++. + . ++.|.+ ..........+||+ .|+|+++++ ||.+
T Consensus 52 ~~~~ilvvG~~~~D~~~~g~v~r-----~--------~---p~~p~~--~~~~~~~~~~~GG~-~NvA~~la~---LG~~ 109 (352)
T 4e84_A 52 ARSRVLVVGDVMLDRYWFGNVDR-----I--------S---PEAPVP--VVHVQRQEERLGGA-ANVARNAVT---LGGQ 109 (352)
T ss_dssp TTCEEEEEECEEEEEEEEEEEEE-----E--------C---SSSSSE--EEEEEEEEEEEEEH-HHHHHHHHH---TTCE
T ss_pred CCCcEEEECccceEEEEeecccc-----c--------C---CCCCcc--eEEeeEEEEecChH-HHHHHHHHH---cCCC
Confidence 457899999999999986 320 0 0 011222 24455678899997 899999998 4699
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccce-eecc-cccccCCcccCCCcchhhhhccc
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSL-VANL-SAANCYKSEHLKKPENWALVEKA 158 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~-~~~~-~~~~~~~~~~~~~~~~~~~l~~~ 158 (341)
+.++|.+|+|.+|+.+++.|++.||++..+..++.+|+.++++++++.+.+ +... +.+....++.+. .....+.++
T Consensus 110 v~~ig~vG~D~~G~~i~~~L~~~GV~~~~~~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~ 187 (352)
T 4e84_A 110 AGLLCVVGCDEPGERIVELLGSSGVTPHLERDPALPTTIKLRVLARQQQLLRVDFEAMPTHEVLLAGLA--RFDVLLPQH 187 (352)
T ss_dssp EEEEEEEESSHHHHHHHHHHTTTSCEEEEEEETTSCCCEEEEEEESSCEEEEEEECCCCCHHHHHHHHH--HHHHHGGGC
T ss_pred EEEEEEeCCChhHHHHHHHHHHcCCceeeEECCCCCCceEEEEEcCCceEEEEEcCCCCCHHHHHHHHH--HHHHhcccC
Confidence 999999999999999999999999999666667778999888887544433 3222 221122121111 123568899
Q ss_pred eEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHH
Q 019448 159 KYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVE 238 (341)
Q Consensus 159 ~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~ 238 (341)
|+++++++. ..+.+.+..+++.++++++++++|+.... .++++++|++++|++|++.+++ ...+.+++.
T Consensus 188 ~~v~~~g~~-~~~~~~~~~~~~~a~~~g~~v~~D~~~~~---------~~~l~~~dil~pN~~Ea~~l~g-~~~~~~~~~ 256 (352)
T 4e84_A 188 DVVLMSDYA-KGGLTHVTTMIEKARAAGKAVLVDPKGDD---------WARYRGASLITPNRAELREVVG-QWKSEDDLR 256 (352)
T ss_dssp SEEEEECCS-SSSCSSHHHHHHHHHHTTCEEEEECCSSC---------CSTTTTCSEECCBHHHHHHHHC-CCSSHHHHH
T ss_pred CEEEEeCCC-CCCHHHHHHHHHHHHhcCCEEEEECCCcc---------hhhccCCcEEcCCHHHHHHHhC-CCCCHHHHH
Confidence 999999765 23334588899999999999999997643 2578999999999999999987 222234566
Q ss_pred HHHHHHhcCCcccc-CCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHH
Q 019448 239 EIALKLSQWPKASE-IRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVR 317 (341)
Q Consensus 239 ~~~~~l~~~~~~~~-~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~ 317 (341)
++++.+ .+ .|++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|++
T Consensus 257 ~~a~~l------~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~pa~~v---~vvDttGAGDaF~ag~l~~l~~g~~l~~al~ 327 (352)
T 4e84_A 257 ARVANL------RAELDIDALLLTRSEEGMTLFSAGGELHAPALAR---EVFDVSGAGDTVIATVATMLGAGVPLVDAVV 327 (352)
T ss_dssp HHHHHH------HHHHTCSEEEEECGGGCEEEEETTEEEEECCCCS---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHH------HHHhCCCEEEEEcCCCcEEEEECCceEEecCCCc---CccCCccccHHHHHHHHHHHHcCCCHHHHHH
Confidence 677776 33 5789999999999999999999999998755 8999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhccccCCCCCCC
Q 019448 318 AGCYTSHVIIQRSGCTYPEKPEF 340 (341)
Q Consensus 318 ~a~~~Aa~~v~~~g~~~p~~~~~ 340 (341)
+|+++|+++|++.|+..|+.+|+
T Consensus 328 ~A~aaaa~~v~~~Ga~~~t~~el 350 (352)
T 4e84_A 328 LANRAAGIVVGKLGTATVDYDEL 350 (352)
T ss_dssp HHHHHHHHHHTSSSSCCCCHHHH
T ss_pred HHHHHHHHHhcCCCCccCCHHHh
Confidence 99999999999999988887765
|
| >2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-44 Score=327.22 Aligned_cols=290 Identities=14% Similarity=0.140 Sum_probs=230.5
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhcc---CCceEecCchHHHHHHHHHHHhcCCCcE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASK---YNVEYIAGGATQNSIRVAQWMLQIPGAT 81 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~GG~a~n~a~~l~~l~~lg~~v 81 (341)
+.|+|+|++++|+++.++ + |.+++..+. ......+||+++|+|+++++ ||.++
T Consensus 13 ~~~~v~G~~~vD~~~~~~--------------------~-~~~g~~~~~s~~~~~~~~~GG~~~NvA~~la~---LG~~~ 68 (331)
T 2ajr_A 13 MVLTVTLNPALDREIFIE--------------------D-FQVNRLYRINDLSKTQMSPGGKGINVSIALSK---LGVPS 68 (331)
T ss_dssp CEEEEESSCEEEEEEECT--------------------T-CCSSCEEECCSGGGEEEEEESHHHHHHHHHHH---TTCCE
T ss_pred eEEEEecchHHeEEEEcC--------------------C-ccCCceEEeccccceEEecCcHHHHHHHHHHH---cCCCe
Confidence 579999999999999987 2 333444444 56788999999999999998 46999
Q ss_pred EEEeeeecCchhHHHHHHHHhcC--cceeeeecCCCCceeEEEEEe-CCcc-ceeecccccccCCcccCCCc--chhhhh
Q 019448 82 SYIGCIGKDKFGEEMKKNSKLAG--VNVHYYEDESASTGTCAVCVV-GGER-SLVANLSAANCYKSEHLKKP--ENWALV 155 (341)
Q Consensus 82 ~~i~~vG~D~~g~~i~~~l~~~g--i~~~~~~~~~~~t~~~~~~~~-~g~~-~~~~~~~~~~~~~~~~~~~~--~~~~~l 155 (341)
.++|.+|+| +|+.+++.|++.| |+++++...+ .|+.++++++ +|++ +.+...++ .++++++... .....+
T Consensus 69 ~~~~~vG~d-~G~~i~~~L~~~g~~V~~~~v~~~~-~t~~~~~~v~~~g~~~~~~~~~g~--~l~~~~~~~~~~~~~~~~ 144 (331)
T 2ajr_A 69 VATGFVGGY-MGKILVEELRKISKLITTNFVYVEG-ETRENIEIIDEKNKTITAINFPGP--DVTDMDVNHFLRRYKMTL 144 (331)
T ss_dssp EEEEEEEHH-HHHHHHHHHHHHCTTEEEEEEEESS-CCEEEEEEEETTTTEEEEEECCCC--CCCHHHHHHHHHHHHHHH
T ss_pred EEEEEecCc-hHHHHHHHHHHcCCccceEEEEcCC-CCeEEEEEEeCCCceEEEEeCCCC--CCCHHHHHHHHHHHHHhc
Confidence 999999998 9999999999999 9999986544 4777777776 6777 55544443 3555544320 012356
Q ss_pred ccceEEEEecccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhc---CCCcEEecCHHH-HHHHhhhc
Q 019448 156 EKAKYFYIAGFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVL---PYMDYIFGNETE-ARTFSKVQ 230 (341)
Q Consensus 156 ~~~~~v~i~~~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l---~~~dvl~~n~~E-~~~l~~~~ 230 (341)
.++++++++++.+ ..+.+.+..+++.+++++.++++|+.... +.+++ +++|++++|++| ++.+++..
T Consensus 145 ~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~--------~~~~l~~~~~~dil~~N~~E~~~~l~g~~ 216 (331)
T 2ajr_A 145 SKVDCVVISGSIPPGVNEGICNELVRLARERGVFVFVEQTPRL--------LERIYEGPEFPNVVKPDLRGNHASFLGVD 216 (331)
T ss_dssp TTCSEEEEESCCCTTSCTTHHHHHHHHHHHTTCEEEEECCHHH--------HHHHHHSSCCCSEECCCCTTCCSCBTTBC
T ss_pred ccCCEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECChHH--------HHHHHhcCCCCeEEEeCccchHHHHhCCC
Confidence 8899999987653 34467899999999999999999997532 33344 459999999999 99888753
Q ss_pred CCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEe-ceecCCCcccCCCCCchhhHHHHHHHHh-c
Q 019448 231 GWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFP-VIVLPKDKLVDTNGAGDAFVGGFLSQLV-Q 308 (341)
Q Consensus 231 ~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~-~~~~~~~~~vd~tGAGDaf~ag~~~~l~-~ 308 (341)
..+.+++.++++++ .+. ++.+|||+|++|++++++++.+++| ++++ +++|||||||+|+|||+++|+ +
T Consensus 217 ~~~~~~~~~~~~~l------~~~-~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~v---~vvDttGAGDaF~ag~l~~l~~~ 286 (331)
T 2ajr_A 217 LKTFDDYVKLAEKL------AEK-SQVSVVSYEVKNDIVATREGVWLIRSKEEI---DTSHLLGAGDAYVAGMVYYFIKH 286 (331)
T ss_dssp CCSHHHHHHHHHHH------HHH-SSEEEEEETTTEEEEECSSCEEEEEESSCC---CGGGCTTHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH------HHh-cCEEEEeecCCceEEEeCCcEEEEecCCcc---cccCCCchHHHHHHHHHHHHHHc
Confidence 32223456677777 455 7899999999999999888788888 7654 899999999999999999999 9
Q ss_pred CCCHHHHHHHHHHHhhhhhhhccccCCCCCCC
Q 019448 309 EKPIEECVRAGCYTSHVIIQRSGCTYPEKPEF 340 (341)
Q Consensus 309 g~~~~~a~~~a~~~Aa~~v~~~g~~~p~~~~~ 340 (341)
|+++++|+++|+++|+++|++.|+.+|+.+|+
T Consensus 287 g~~~~~al~~A~a~aa~~v~~~G~~~~~~~ev 318 (331)
T 2ajr_A 287 GANFLEMAKFGFASALAATRRKEKYMPDLEAI 318 (331)
T ss_dssp CSCHHHHHHHHHHHHHHHTTSSSCCCCCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHcCcCcCCCCHHHH
Confidence 99999999999999999999999988876653
|
| >2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-43 Score=316.73 Aligned_cols=281 Identities=19% Similarity=0.266 Sum_probs=227.7
Q ss_pred CCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEE
Q 019448 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATS 82 (341)
Q Consensus 3 ~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~ 82 (341)
++++|+++|++++|++..++ ++|..++..+..+....+||++.|+|+++++ ||.++.
T Consensus 16 ~~~~i~viG~~~iD~~~~~~--------------------~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~---LG~~v~ 72 (312)
T 2hlz_A 16 RGSQILCVGLVVLDVISLVD--------------------KYPKEDSEIRCLSQRWQRGGNASNSCTILSL---LGAPCA 72 (312)
T ss_dssp -CCEEEEESCCEEEEEEEES--------------------SCCCTTCEEECSEEEEEEESHHHHHHHHHHH---HTCCEE
T ss_pred CCCcEEEECcceEEEeeccc--------------------cCCCccceeecccceeccCccHHHHHHHHHH---cCCceE
Confidence 45689999999999999887 3454444445556678999999999999998 359999
Q ss_pred EEeeeecCchhHHHHHHHHhcCcceeeeecC-CCCceeEEEEEe--CCccceeecccccccCCcccCCCcchhhhhccce
Q 019448 83 YIGCIGKDKFGEEMKKNSKLAGVNVHYYEDE-SASTGTCAVCVV--GGERSLVANLSAANCYKSEHLKKPENWALVEKAK 159 (341)
Q Consensus 83 ~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~-~~~t~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 159 (341)
++|.+|+|.+|+.+++.|++.||+++++... +.+|+.++++++ +|+|+++.+.++...++++++.. ..+.+++
T Consensus 73 ~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~~~~~~~~~~~~~~----~~l~~~~ 148 (312)
T 2hlz_A 73 FMGSMAPGHVADFVLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDVSATDFEK----VDLTQFK 148 (312)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCCEEEEEEETTTCCEEEEEECCCCCCCCHHHHHT----SCGGGEE
T ss_pred EEEEecCchHHHHHHHHHHHcCCCCccceeccCCCCCeEEEEEECCCCceEEEecCCccccCCHHHhhH----hhhccCC
Confidence 9999999999999999999999999987544 567787777664 58888887777666777776653 2468899
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhC--------CCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcC
Q 019448 160 YFYIAGFFLTVSPDSIQLVAEHAAAN--------NKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQG 231 (341)
Q Consensus 160 ~v~i~~~~~~~~~~~~~~~~~~a~~~--------~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~ 231 (341)
++|++++ +++....+++.++++ ++++++|+... ++.++++++++|++++|++|++.+ +
T Consensus 149 ~v~~~~~----~~~~~~~~~~~a~~~~~~~~~~~~~~v~~d~~~~------~~~~~~~l~~~dil~~n~~ea~~l-g--- 214 (312)
T 2hlz_A 149 WIHIEGR----NASEQVKMLQRIDAHNTRQPPEQKIRVSVEVEKP------REELFQLFGYGDVVFVSKDVAKHL-G--- 214 (312)
T ss_dssp EEEEECS----SHHHHHHHHHHHHHHHTTSCGGGCCEEEEEECSC------CGGGGGGGGSSSEEEECHHHHHHT-T---
T ss_pred EEEEecc----CHHHHHHHHHHHHHhcccccCCCCeEEEEEcccc------hHHHHHHHhcCCEEEEcHHHHHHc-C---
Confidence 9999975 356677778877776 67899998653 134678899999999999999986 3
Q ss_pred CCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEEC-CeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCC
Q 019448 232 WETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQD-GKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK 310 (341)
Q Consensus 232 ~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~-~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~ 310 (341)
..+++++++.+.++ ...| +.||||+|++|+++++. +..+++|+++ .++++||+||||+|+|||+++|++|+
T Consensus 215 --~~~~~~~~~~l~~~---~~~g-~~vvvt~G~~G~~~~~~~~~~~~~~~~~--~~~vvdt~GAGDaf~a~~~~~l~~g~ 286 (312)
T 2hlz_A 215 --FQSAEEALRGLYGR---VRKG-AVLVCAWAEEGADALGPDGKLLHSDAFP--PPRVVDTLGAGDTFNASVIFSLSQGR 286 (312)
T ss_dssp --CCSHHHHHHHHGGG---SCTT-CEEEEECGGGCEEEECTTCCEEEECCCC--CSSCCCCTTHHHHHHHHHHHHHHTTC
T ss_pred --CCCHHHHHHHHHHh---cCCC-CEEEEEecccCeEEEccCCCEEECCCCC--CCCcccCCCchHHHHHHHHHHHHcCC
Confidence 24678888887432 1223 78999999999999874 4567788753 24789999999999999999999999
Q ss_pred CHHHHHHHHHHHhhhhhhhccc
Q 019448 311 PIEECVRAGCYTSHVIIQRSGC 332 (341)
Q Consensus 311 ~~~~a~~~a~~~Aa~~v~~~g~ 332 (341)
++++|+++|+++|+++|++.|+
T Consensus 287 ~~~~a~~~a~~~aa~~v~~~G~ 308 (312)
T 2hlz_A 287 SVQEALRFGCQVAGKKCGLQGF 308 (312)
T ss_dssp CHHHHHHHHHHHHHHHHTSSSS
T ss_pred CHHHHHHHHHHHHHHHHhhcCc
Confidence 9999999999999999999997
|
| >3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-43 Score=318.17 Aligned_cols=281 Identities=20% Similarity=0.262 Sum_probs=230.6
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i 84 (341)
++|+|+|++++|++...+ ++..+..+....+||++.|+|+++++ ||.++.++
T Consensus 2 ~~v~viG~~~iD~~~~~~-------------------------g~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~i 53 (313)
T 3ewm_A 2 SLIASIGELLIDLISVEE-------------------------GDLKDVRLFEKHPGGAPANVAVGVSR---LGVKSSLI 53 (313)
T ss_dssp CEEEEESCCEEEEEESSS-------------------------SCTTTCCEEEEEEECHHHHHHHHHHH---TTCEEEEE
T ss_pred CcEEEECceeeeeecCCC-------------------------CCcccccceeecCCCHHHHHHHHHHH---CCCCeEEE
Confidence 469999999999997543 12334566788999999999999998 56999999
Q ss_pred eeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEeCCccceeeccc-ccccCCcccCCCcchhhhhccceEEE
Q 019448 85 GCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVVGGERSLVANLS-AANCYKSEHLKKPENWALVEKAKYFY 162 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~v~ 162 (341)
|.+|+|.+|+.+++.|++.||+++++. .++.+|+.+++..++|+|+++.+.+ +...++++++.. ..+++++++|
T Consensus 54 g~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~g~~~~~~~~~~a~~~l~~~~~~~----~~l~~~~~~~ 129 (313)
T 3ewm_A 54 SKVGNDPFGEYLIEELSKENVDTRGIVKDEKKHTGIVFVQLKGASPSFLLYDDVAYFNMTLNDINW----DIVEEAKIVN 129 (313)
T ss_dssp EEEESSHHHHHHHHHHHHTTCBCTTEEEESSSCCEEEEEECSSSSCEEEECCSSGGGCCCGGGCCH----HHHHHCSEEE
T ss_pred EEeCCCHHHHHHHHHHHHcCCCccceeecCCCCceEEEEEecCCCcceEeeccCHHHhCChhhCCH----HHhCCCCEEE
Confidence 999999999999999999999999875 5677898887777678888877665 345777877763 5678899999
Q ss_pred Eecccc--ccCHHHHHHHHHHHHhCCCeEEEeCCch--hHH---HHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCC
Q 019448 163 IAGFFL--TVSPDSIQLVAEHAAANNKVFMMNLSAP--FIC---EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETD 235 (341)
Q Consensus 163 i~~~~~--~~~~~~~~~~~~~a~~~~~~v~~d~~~~--~~~---~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~ 235 (341)
++++.+ +.+.+.+..+++.++ .+.++++||... .|. ....+.++++++++|++++|++|++.+++...
T Consensus 130 ~~g~~~~~~~~~~~~~~~~~~a~-~~~~v~~Dp~~~~~~~~~~~~~~~~~~~~~l~~~di~~~N~~E~~~l~~~~~---- 204 (313)
T 3ewm_A 130 FGSVILARNPSRETVMKVIKKIK-GSSLIAFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLENQGV---- 204 (313)
T ss_dssp EESGGGGSTTHHHHHHHHHHHHB-TTBEEEEECCCCGGGGTTCHHHHHHHHHHHHHHCSEEEEEHHHHHHHHTTTC----
T ss_pred EcCcccCCcchHHHHHHHHHHhc-cCCEEEEeCCCChHHcCCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhccCc----
Confidence 999754 345578889999888 468899999642 232 23445678889999999999999998875310
Q ss_pred CHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHh--cCCCHH
Q 019448 236 DVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLV--QEKPIE 313 (341)
Q Consensus 236 d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~--~g~~~~ 313 (341)
...+...+|||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|+ +|++++
T Consensus 205 ---------------~~~~~~~vviT~G~~G~~~~~~~~~~~~~~~~v---~vvDttGAGDaf~a~~~~~l~~~~g~~l~ 266 (313)
T 3ewm_A 205 ---------------EVKGSMLTAITLGPKGCRLIKNETVVDVPSYNV---NPLDTTGAGDAFMAALLVGILKLKGLDLL 266 (313)
T ss_dssp ---------------CCCCSSEEEEECGGGEEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHHSSSCCHH
T ss_pred ---------------cccCceEEEEEECCCCeEEEECCeeEEcCCCCc---ccCCCCCchHHHHHHHHHHHHhcCCCCHH
Confidence 112345689999999999999998888888765 899999999999999999999 999999
Q ss_pred HHHHHHHHHhhhhhhhccc-cCCCCCCC
Q 019448 314 ECVRAGCYTSHVIIQRSGC-TYPEKPEF 340 (341)
Q Consensus 314 ~a~~~a~~~Aa~~v~~~g~-~~p~~~~~ 340 (341)
+|+++|+++|+++|++.|+ .+|+.+|+
T Consensus 267 ~a~~~A~~~aa~~v~~~G~~~~p~~~ev 294 (313)
T 3ewm_A 267 KLGKFANLVAALSTQKRGAWSTPRKDEL 294 (313)
T ss_dssp HHHHHHHHHHHHHTTSCSSCCCCCHHHH
T ss_pred HHHHHHHHHHHHHHccCCCCCCCCHHHH
Confidence 9999999999999999998 67776654
|
| >2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-42 Score=313.12 Aligned_cols=286 Identities=19% Similarity=0.206 Sum_probs=228.9
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
-+++.|++.+|++..++. + .+++..+.......+||++.|+|+++++ ||.++.++|
T Consensus 2 i~tv~~n~~~D~~~~~~~--------------------~-~~g~~~~~~~~~~~~GG~~~N~A~~la~---LG~~~~~~~ 57 (306)
T 2abq_A 2 IYTVTLNPSIDYIVQVEN--------------------F-QQGVVNRSERDRKQPGGKGINVSRVLKR---LGHETKALG 57 (306)
T ss_dssp EEEEESSCEEEEEEECTT--------------------C-CSSSEEECSEEEEEEECHHHHHHHHHHH---TTCCCEEEE
T ss_pred EEEEecCchheEEEEcCC--------------------c-ccCCeEEeceeEecCCchHHHHHHHHHH---cCCCceEEE
Confidence 578889999999999872 1 3333444456778999999999999998 469999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCc-chhhhhccceEEEEe
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKP-ENWALVEKAKYFYIA 164 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~v~i~ 164 (341)
.+|+ .+|+.+++.|++.||+++++...+ .|+.++.+ .+|+++.+...++ .++++++... +.+..++++|++|++
T Consensus 58 ~vG~-~~g~~i~~~L~~~gv~~~~v~~~~-~t~~~~~~-~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~v~~~ 132 (306)
T 2abq_A 58 FLGG-FTGAYVRNALEKEEIGLSFIEVEG-DTRINVKI-KGKQETELNGTAP--LIKKEHVQALLEQLTELEKGDVLVLA 132 (306)
T ss_dssp EEEH-HHHHHHHHHHHHTTCEECCEEESS-CCEEEEEE-ESSSCEEEBCCCC--CCCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred Eecc-hhHHHHHHHHHHcCCceEEEEcCC-CCceEEEE-eCCceEEEECCCC--CCCHHHHHHHHHHHHhccCCCEEEEe
Confidence 9998 799999999999999999986544 47777665 6787765544442 4555554320 011115789999998
Q ss_pred cccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC-CCcEEecCHHHHHHHhhhcCCCCCCHHHHHH
Q 019448 165 GFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP-YMDYIFGNETEARTFSKVQGWETDDVEEIAL 242 (341)
Q Consensus 165 ~~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~-~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~ 242 (341)
++.+ ..+.+.+..+++.+++++.++++|+... .++++++ ++|++++|++|+..+++....+.+++.++++
T Consensus 133 g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~--------~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~ 204 (306)
T 2abq_A 133 GSVPQAMPQTIYRSMTQIAKERGAFVAVDTSGE--------ALHEVLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQ 204 (306)
T ss_dssp SCCCTTSCTTHHHHHHHHHHTTTCEEEEECCHH--------HHHHHGGGCCSEECCBHHHHHHHHTSCCCSHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHHHhcCCEEEEECChH--------HHHHHHhcCCcEEecCHHHHHHHhCCCCCCHHHHHHHHH
Confidence 8653 3456889999999999999999999743 2567888 9999999999999998754322345566777
Q ss_pred HHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHHH
Q 019448 243 KLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYT 322 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~ 322 (341)
.+ .+.|++.+|||+|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|+++|+++
T Consensus 205 ~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaF~a~~~~~l~~g~~~~~a~~~A~a~ 275 (306)
T 2abq_A 205 RL------IGEGIESILVSFAGDGALFASAEGMFHVNVPSG---EVRNSVGAGDSVVAGFLAALQEGKSLEDAVPFAVAA 275 (306)
T ss_dssp HH------HHTTCCEEEEECGGGCEEEEETTEEEEECCCCC---CCCCCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HH------HHcCCCEEEEecCCCceEEEeCCCEEEEeCCCc---cccCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 77 566889999999999999998888888887654 889999999999999999999999999999999999
Q ss_pred hhhhhhhccccCCCCCC
Q 019448 323 SHVIIQRSGCTYPEKPE 339 (341)
Q Consensus 323 Aa~~v~~~g~~~p~~~~ 339 (341)
|+++|++. .+|+.+|
T Consensus 276 aa~~v~~~--~~p~~~e 290 (306)
T 2abq_A 276 GSATAFSD--GFCTREE 290 (306)
T ss_dssp HHHHHHSS--SCCCHHH
T ss_pred HHHHhcCc--CCCCHHH
Confidence 99999998 6676654
|
| >3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=314.00 Aligned_cols=292 Identities=16% Similarity=0.206 Sum_probs=229.0
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
+|+|+|++++|++..++++++..+ . .+++|..++..........+||++.|+|+++++ ||.++.++|
T Consensus 2 ~i~v~G~~~iD~~~~~~~~~~~~~--~--------~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~i~ 68 (326)
T 3b1n_A 2 ATLICGSIAYDNIMTFEGRFREHI--L--------PDQVHLINLSFLVPTMRREFGGCAGNIAYALNL---LGGDARMMG 68 (326)
T ss_dssp CEEEESCCEEEEEEECSSCGGGGC--C--------TTSSSSCEEEEECCSCCCEEECHHHHHHHHHHH---TTCCEEEEE
T ss_pred cEEEECcceEEEEEecchhhhhhc--c--------ccccCCCCcceecccceeccCCHHHHHHHHHHH---cCCCeeEEE
Confidence 699999999999998854433221 1 113444444444556778999999999999998 469999999
Q ss_pred eeec-CchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccceEEE
Q 019448 86 CIGK-DKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFY 162 (341)
Q Consensus 86 ~vG~-D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 162 (341)
.+|+ | +|+ +++.|++.||+++++. .++.+|+.++++++ +|++.+..+.++...+.++++.. ..++++++
T Consensus 69 ~vG~~D-~g~-i~~~L~~~gVd~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~~~~~~~~~------~~~~~~v~ 140 (326)
T 3b1n_A 69 TLGAVD-AQP-YLDRMDALGLSREYVRVLPDTYSAQAMITTDLDNNQITAFHPGAMMQSHVNHAGE------AKDIKLAI 140 (326)
T ss_dssp EEETTT-CHH-HHHHHHHHTCEEEEEEEETTCCCEEEEEEECTTCCCEEEEECGGGGGGGGSCGGG------CCSCSEEE
T ss_pred EECCcC-HHH-HHHHHHHcCCcccceEEcCCCCceEEEEEECCCCceEEEEecChhhhcChhhccc------ccCCCEEE
Confidence 9999 9 899 9999999999999885 45668999988887 57776656666655665555542 27899999
Q ss_pred EeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHH
Q 019448 163 IAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL 242 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~ 242 (341)
+++. .++.+.++++.+++++.++++|+..... ....+.++++++++|++++|++|++.+++... .+.++
T Consensus 141 ~~~~----~~~~~~~~~~~a~~~g~~v~~D~~~~~~-~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~---~~~~~--- 209 (326)
T 3b1n_A 141 VGPD----GFQGMVQHTEELAQAGVPFIFDPGQGLP-LFDGATLRRSIELATYIAVNDYEAKLVCDKTG---WSEDE--- 209 (326)
T ss_dssp ECSC----CHHHHHHHHHHHHHHTCCEEECCGGGGG-GCCHHHHHHHHHHCSEEEEEHHHHHHHHHHHC---CCHHH---
T ss_pred ECCc----cHHHHHHHHHHHHHCCCEEEEeCchhhh-hccHHHHHHHHHhCCEEecCHHHHHHHhCCCC---CCHHH---
Confidence 9763 3678889999999999999999964321 00234567888999999999999999987532 23333
Q ss_pred HHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHHH
Q 019448 243 KLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYT 322 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~ 322 (341)
+ .+ +++.||||+|++|++++++++.+++|+++++ .++|||||||+|+|||+++|++|+++++|+++|+++
T Consensus 210 -l------~~-~~~~vvvT~G~~Ga~~~~~~~~~~~~~~~v~--~vvDttGAGDaF~ag~l~~l~~g~~~~~a~~~A~~~ 279 (326)
T 3b1n_A 210 -I------AS-RVQALIITRGEHGATIRHRDGTEQIPAVRAE--RVIDPTGCGDAFRGGLLYGIEHGFDWATAGRLASLM 279 (326)
T ss_dssp -H------HT-TSSEEEEECGGGCEEEEETTEEEEECCCCCS--CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred -H------Hh-cCCEEEEecCCCceEEEECCcEEEeCCCCCC--CCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 3 12 2688999999999999988888888876541 378999999999999999999999999999999999
Q ss_pred hhhhhhhcccc--CCCCCC
Q 019448 323 SHVIIQRSGCT--YPEKPE 339 (341)
Q Consensus 323 Aa~~v~~~g~~--~p~~~~ 339 (341)
|+++|++.|+. +|+.+|
T Consensus 280 aa~~v~~~G~~~~~~~~~e 298 (326)
T 3b1n_A 280 GALKIAHQGPQTYAPTRAE 298 (326)
T ss_dssp HHHHHTSSSTTCCCCCHHH
T ss_pred HHHHHcCCCCCCCCCCHHH
Confidence 99999999984 566554
|
| >2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=315.79 Aligned_cols=297 Identities=17% Similarity=0.175 Sum_probs=231.9
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i 84 (341)
++|+|+|++++|++..++++++..+- .+++|..++..........+||++.|+|+++++ ||.++.++
T Consensus 11 m~i~v~G~~~~D~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~i 77 (334)
T 2pkf_A 11 MTIAVTGSIATDHLMRFPGRFSEQLL----------PEHLHKVSLSFLVDDLVMHRGGVAGNMAFAIGV---LGGEVALV 77 (334)
T ss_dssp SEEEEESCCEEEEEEECSSCTHHHHT----------TSCGGGCCCCCCCSEEEEEEECHHHHHHHHHHH---TTCEEEEE
T ss_pred CeEEEECChhheEEEecChHHhhhhc----------hhhccccccccccccceecCCChHHHHHHHHHH---cCCCeEEE
Confidence 48999999999999988544443220 113454444444556778999999999999998 46999999
Q ss_pred eeeecCchhHHHHHHHHhcCcceeeeec-CCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccceEEE
Q 019448 85 GCIGKDKFGEEMKKNSKLAGVNVHYYED-ESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFY 162 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~~-~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 162 (341)
|.+|+| +|+ +++.|++.||+++++.. ++.+|+.++++++ +|++.+..+.++...++++++.. ....+.+++++|
T Consensus 78 ~~vG~D-~g~-i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~--~~~~l~~~~~v~ 153 (334)
T 2pkf_A 78 GAAGAD-FAD-YRDWLKARGVNCDHVLISETAHTARFTCTTDVDMAQIASFYPGAMSEARNIKLAD--VVSAIGKPELVI 153 (334)
T ss_dssp CEECGG-GHH-HHHHHHTTTEECTTCEECSSCCCEEEEEEECTTCCEEEEEECGGGGGGGGCCHHH--HHHHHCSCSEEE
T ss_pred EEEeCc-hHH-HHHHHHHCCCceeeeEecCCCCceEEEEEEcCCCCEEEEECCchhhhCCHhhcCh--hhhhhcCCCEEE
Confidence 999999 999 99999999999998754 4568999888876 57777766666655666655542 112357899999
Q ss_pred EeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHH
Q 019448 163 IAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL 242 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~ 242 (341)
+++. .++.+..+++.+++++.++++|+.... .....+.++++++++|++++|++|++.+++... .+.++
T Consensus 154 ~~~~----~~~~~~~~~~~a~~~g~~v~~D~~~~~-~~~~~~~l~~~l~~~dil~~N~~E~~~l~g~~~---~~~~~--- 222 (334)
T 2pkf_A 154 IGAN----DPEAMFLHTEECRKLGLAFAADPSQQL-ARLSGEEIRRLVNGAAYLFTNDYEWDLLLSKTG---WSEAD--- 222 (334)
T ss_dssp EESC----CHHHHHHHHHHHHHHTCCEEEECGGGG-GTSCHHHHHTTTTTCSEEEEEHHHHHHHHHHHC---CCHHH---
T ss_pred EcCC----ChHHHHHHHHHHHhcCCeEEEeccchh-hhhhHHHHHHHHhcCCEEecCHHHHHHHhccCC---CCHHH---
Confidence 9864 367888899999999999999996432 000234577899999999999999999987532 23332
Q ss_pred HHhcCCccccCCccEEEEEeCCCceEEEECCe-eEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHH
Q 019448 243 KLSQWPKASEIRKRTAVITQGADPVVVAQDGK-LKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCY 321 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~-~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~ 321 (341)
+ .+. ++.||||+|++|++++++++ .+++|+++++ .++||+||||+|+|||+++|++|+++++|+++|++
T Consensus 223 -l------~~~-~~~vvvt~G~~G~~~~~~~~~~~~~~~~~v~--~vvDttGAGDaF~a~~~~~l~~g~~~~~a~~~A~~ 292 (334)
T 2pkf_A 223 -V------MAQ-IDLRVTTLGPKGVDLVEPDGTTIHVGVVPET--SQTDPTGVGDAFRAGFLTGRSAGLGLERSAQLGSL 292 (334)
T ss_dssp -H------HTT-CSCEEEECGGGCEEEECTTSCEEEECCCCCS--CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred -H------Hhc-CCEEEEEeCCCCeEEEeCCCcEEEeCCcCCC--CCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 3 222 67899999999999998777 7888876541 37899999999999999999999999999999999
Q ss_pred Hhhhhhhhcccc--CCCCCC
Q 019448 322 TSHVIIQRSGCT--YPEKPE 339 (341)
Q Consensus 322 ~Aa~~v~~~g~~--~p~~~~ 339 (341)
+|+.+|++.|+. +|+.+|
T Consensus 293 ~aa~~v~~~G~~~~~p~~~e 312 (334)
T 2pkf_A 293 VAVLVLESTGTQEWQWDYEA 312 (334)
T ss_dssp HHHHHHTSSSSSCCCCCHHH
T ss_pred HHHHHHhCCCCCcCCCCHHH
Confidence 999999999984 566554
|
| >3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-42 Score=308.29 Aligned_cols=276 Identities=20% Similarity=0.267 Sum_probs=220.2
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCC-cEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPG-ATSY 83 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~-~v~~ 83 (341)
++|+|+|++++|++.... .+....+||++.|+|+++++ ||. ++.+
T Consensus 3 ~~ilviG~~~iD~~~~~~-------------------------------~~~~~~~GG~~~NvA~~la~---LG~~~~~~ 48 (313)
T 3kd6_A 3 LSLLVIGSLAFDDIETPF-------------------------------GRSDNTLGGSSTYIALSASY---FTDEPIRM 48 (313)
T ss_dssp CCEEEESCCEEEEEECSS-------------------------------CEEEEEEECHHHHHHHHHTT---TCSSCEEE
T ss_pred ccEEEEeEEEEeeecCCC-------------------------------CcccccCCCHHHHHHHHHHH---hCCCceEE
Confidence 479999999999996432 23467999999999999987 569 9999
Q ss_pred EeeeecCchhHHHHHHHHhcCcceeeeec-CCCCceeEEEEE--e-CCccceeecccccccCCcccCCCcchhhhhccce
Q 019448 84 IGCIGKDKFGEEMKKNSKLAGVNVHYYED-ESASTGTCAVCV--V-GGERSLVANLSAANCYKSEHLKKPENWALVEKAK 159 (341)
Q Consensus 84 i~~vG~D~~g~~i~~~l~~~gi~~~~~~~-~~~~t~~~~~~~--~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 159 (341)
+|.+|+| +|+.+++.|+++||+++++.. ++.+|....-.. + ++++.+....+....+.++. ...++++|
T Consensus 49 ig~vG~D-~g~~~~~~L~~~gVd~~~v~~~~~~~T~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 121 (313)
T 3kd6_A 49 VGVVGSD-FGKEHFDLLHAKNIDTRGIQVIEDGKTFRWAGRYHYDMNTRDTLDTQLNVFAEFDPHV------PQYYRDSK 121 (313)
T ss_dssp EEEEETT-SCHHHHHHHHHTTEEEEEEEEETTCCCEEEEEEECTTSSCEEEEEEECGGGTTCCCCC------CGGGTTCS
T ss_pred EEecCCC-cHHHHHHHHHHcCCCccceEEcCCCCeeeeeeeeeccccccceeecccchHhhcCccc------hHHHccCC
Confidence 9999999 999999999999999999854 445563321111 1 33444444444434444322 24578999
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHH
Q 019448 160 YFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEE 239 (341)
Q Consensus 160 ~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~ 239 (341)
++++++ ++++....+++.+ +.+.++++||. ..|.....+.++++++++|++++|++|++.|++ .+++++
T Consensus 122 ~v~~~~----~~~~~~~~~~~~~-~~~~~v~~Dp~-~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g-----~~~~~~ 190 (313)
T 3kd6_A 122 FVCLGN----IDPELQLKVLDQI-DDPKLVVCDTM-NFWIEGKPEELKKVLARVDVFIVNDSEARLLSG-----DPNLVK 190 (313)
T ss_dssp EEEECS----SCHHHHHHHHTTC-SSCSEEEEECC-HHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHS-----CSCHHH
T ss_pred EEEEcC----CCHHHHHHHHHHH-hhCCEEEEcCh-hhhhhhhHHHHHHHHhcCCEEEeCHHHHHHHhC-----CCCHHH
Confidence 999965 3566667777766 56788999995 456555667788999999999999999999987 357889
Q ss_pred HHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCC-----CHHH
Q 019448 240 IALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK-----PIEE 314 (341)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~-----~~~~ 314 (341)
+++.+ .+.|++.||||+|++|++++++++.+++|++++ .+++||+||||+|+|||+++|++|+ ++++
T Consensus 191 ~~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~~--~~vvdttGAGDaf~a~~~~~l~~g~~~~~~~l~~ 262 (313)
T 3kd6_A 191 TARII------REMGPKTLIIKKGEHGALLFTDNGIFAAPAFPL--ESIYDPTGAGDTFAGGFIGHLARCGNTSEAEMRK 262 (313)
T ss_dssp HHHHH------HTTSCSEEEEECTTSCEEEEETTEEEEECCCTT--CCCSCCTTHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_pred HHHHH------HHcCCCEEEEeeCCCcEEEEECCceEEeCCCCC--CCcCCCCCccHHHHHHHHHHHHcCCCccccCHHH
Confidence 99998 667899999999999999999998888887654 2689999999999999999999998 8999
Q ss_pred HHHHHHHHhhhhhhhcccc---CCCCCCC
Q 019448 315 CVRAGCYTSHVIIQRSGCT---YPEKPEF 340 (341)
Q Consensus 315 a~~~a~~~Aa~~v~~~g~~---~p~~~~~ 340 (341)
|+++|+++|+++|++.|+. .|+.+|+
T Consensus 263 a~~~a~~~aa~~v~~~G~~~~~~~~~~ev 291 (313)
T 3kd6_A 263 AVLYGSAMASFCVEQFGPYRYNDLDLLEV 291 (313)
T ss_dssp HHHHHHHHHHHHTTSSTTGGGGTCCHHHH
T ss_pred HHHHHHHHHHHHHeecCCCCCCCCCHHHH
Confidence 9999999999999999995 4666553
|
| >2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=312.38 Aligned_cols=285 Identities=16% Similarity=0.172 Sum_probs=229.6
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
.+++.|++.+|+++.++ + +..++..+..+....+||++.|+|+++++ ||.++.++|
T Consensus 2 i~tvt~n~~~D~~~~~~--------------------~-~~~g~~~~~~~~~~~~GG~~~N~A~~la~---LG~~~~~~~ 57 (306)
T 2jg5_A 2 IYTVTFNPSIDYVIFTN--------------------D-FKIDGLNRATATYKFAGGKGINVSRVLKT---LDVESTALG 57 (306)
T ss_dssp EEEEESSCEEEEEEECS--------------------S-CCTTSEEECSEEEEEEESHHHHHHHHHHH---TTCCCEEEE
T ss_pred EEEEecCceEEEEEEcC--------------------C-cccCceEEeceeEecCCchHHHHHHHHHH---cCCCeeEEE
Confidence 57899999999999987 2 34455555567788999999999999998 469999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhh---hccceEEE
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWAL---VEKAKYFY 162 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~v~ 162 (341)
.+|+ .+|+.+++.|++.||+++++...+ .|+.++.+ .+|+++.+...++ .++++++.. .... ++++|+++
T Consensus 58 ~vG~-~~g~~i~~~l~~~gv~~~~v~~~~-~t~~~~~~-~~g~~~~~~~~g~--~~~~~~~~~--~~~~~~~~~~~~~v~ 130 (306)
T 2jg5_A 58 FAGG-FPGKFIIDTLNNSAIQSNFIEVDE-DTRINVKL-KTGQETEINAPGP--HITSTQFEQ--LLQQIKNTTSEDIVI 130 (306)
T ss_dssp EECH-HHHHHHHHHHHHTTCEECCEECSS-CCEEEEEE-ESSSEEEEECCCC--CCCHHHHHH--HHHHHTTCCTTCEEE
T ss_pred EecC-cchHHHHHHHHHCCCceeEEEcCC-CCeEEEEE-cCCCEEEEECCCC--CCCHHHHHH--HHHHHHhccCCCEEE
Confidence 9999 699999999999999999986543 47777665 6777766555443 355554432 1111 57899999
Q ss_pred Eecccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC-CCcEEecCHHHHHHHhhhcCCCCCCHHHH
Q 019448 163 IAGFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP-YMDYIFGNETEARTFSKVQGWETDDVEEI 240 (341)
Q Consensus 163 i~~~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~-~~dvl~~n~~E~~~l~~~~~~~~~d~~~~ 240 (341)
++++.. ..+.+.+..+++.+++++.++++|+.... +.++++ ++|++++|++|++.|++....+.+++.++
T Consensus 131 ~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~~~~--------~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~ 202 (306)
T 2jg5_A 131 VAGSVPSSIPSDAYAQIAQITAQTGAKLVVDAEKEL--------AESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKY 202 (306)
T ss_dssp EESCCCTTSCTTHHHHHHHHHHHHCCEEEEECCHHH--------HHHHGGGCCSEECCBHHHHHHHTTSCCCSHHHHHHH
T ss_pred EeCCCCCCCChHHHHHHHHHHHHCCCEEEEECChHH--------HHHHHhcCCeEEecCHHHHHHHhCCCCCCHHHHHHH
Confidence 987653 23467888999999999999999997532 456677 69999999999999987533222355677
Q ss_pred HHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHH
Q 019448 241 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGC 320 (341)
Q Consensus 241 ~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~ 320 (341)
++.+ .+.|++.+|||+|++|++++++++.+++|++++ +++||+||||+|+|||+++|++|+++++|+++|+
T Consensus 203 ~~~l------~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~ 273 (306)
T 2jg5_A 203 GRLL------VDKGAQSVIVSLGGDGAIYIDKEISIKAVNPQG---KVVNTVGSGDSTVAGMVAGIASGLSIEKAFQQAV 273 (306)
T ss_dssp HHHH------HHTTCSCEEEECGGGCEEEECSSEEEEEECCCC---CCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHH------HHcCCCEEEEccCCCceEEEeCCcEEEEeCCcc---cccCCcChHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 7777 566889999999999999998888888887654 7899999999999999999999999999999999
Q ss_pred HHhhhhhhhccccCCCCCCC
Q 019448 321 YTSHVIIQRSGCTYPEKPEF 340 (341)
Q Consensus 321 ~~Aa~~v~~~g~~~p~~~~~ 340 (341)
++|+++|++.| +|+.+|+
T Consensus 274 a~aa~~v~~~G--~~~~~ev 291 (306)
T 2jg5_A 274 ACGTATAFDED--LATRDAI 291 (306)
T ss_dssp HHHHHHHTSSS--SCCHHHH
T ss_pred HHHHHHHcCCC--CCCHHHH
Confidence 99999999999 7876653
|
| >2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-42 Score=308.18 Aligned_cols=277 Identities=19% Similarity=0.229 Sum_probs=219.7
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i 84 (341)
++|+|+|++++|++. . ...+||++.|+|+++++ ||.++.++
T Consensus 4 ~~v~viG~~~~D~~p-----------------------~-------------~~~~GG~~~N~A~~la~---LG~~~~~~ 44 (296)
T 2qhp_A 4 NIIVGMGEALWDVLP-----------------------E-------------GKKIGGAPANFAYHVSQ---FGFDSRVV 44 (296)
T ss_dssp CEEEEESCCEEEEET-----------------------T-------------EEEEECHHHHHHHHHHH---TTCEEEEE
T ss_pred ceEEEEchhheEecC-----------------------C-------------CCCCCCHHHHHHHHHHH---cCCCeeEE
Confidence 489999999999972 0 26899999999999998 46999999
Q ss_pred eeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecccc-cccCCcccCCCcchhhhhccceEE
Q 019448 85 GCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSA-ANCYKSEHLKKPENWALVEKAKYF 161 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~v 161 (341)
|.+|+|.+|+.+++.|++.|| +++. .++.+|+.+++.++ +|+|++....+. ...+.+.+ .....++++|++
T Consensus 45 ~~vG~D~~g~~~~~~l~~~gv--~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~v 118 (296)
T 2qhp_A 45 SAVGNDELGDEIMEVFKEKQL--KNQIERVDYPTGTVQVTLDDEGVPCYEIKEGVAWDNIPFTD----ELKRLALNTRAV 118 (296)
T ss_dssp EEEESSHHHHHHHHHHHHTTC--CEEEEEESSCCEEEEEC------CCEEECSSCGGGCCCCCH----HHHHHHHTEEEE
T ss_pred EEeCCChHHHHHHHHHHHcCC--CEEeecCCCCceEEEEEECCCCCEEEEEecCChhhhCCcch----hhHhhhcCCCEE
Confidence 999999999999999999999 6554 44667888877776 688777655443 22343221 123567899999
Q ss_pred EEecccc--ccCHHHHHHHHHHHHh-CCCeEEEeCCc--hhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCC
Q 019448 162 YIAGFFL--TVSPDSIQLVAEHAAA-NNKVFMMNLSA--PFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDD 236 (341)
Q Consensus 162 ~i~~~~~--~~~~~~~~~~~~~a~~-~~~~v~~d~~~--~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d 236 (341)
|++++.. +.+.+.+..+++.+++ ++.++++|+.. ..|. .+.++++++++|++++|++|++.|++....+.++
T Consensus 119 ~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~v~~D~~~~~~~~~---~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~ 195 (296)
T 2qhp_A 119 CFGSLAQRNEVSRATINRFLDTMPDIDGQLKIFDINLRQDFYT---KEVLRESFKRCNILKINDEELVTISRMFGYPGID 195 (296)
T ss_dssp EECSGGGSSHHHHHHHHHHHHHSCCTTSCEEEEECCCCTTCCC---HHHHHHHHHHCSEEEEEHHHHHHHHHHTTCTTSC
T ss_pred EECChHhcChHHHHHHHHHHHHHHhcCCCEEEEECcCCccccC---HHHHHHHHHHCCEEECCHHHHHHHhcccCCCCCC
Confidence 9987543 2245678888888877 68899999853 2221 3456778899999999999999999865545578
Q ss_pred HHHHHHHHhcCCcccc-CCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHH
Q 019448 237 VEEIALKLSQWPKASE-IRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEEC 315 (341)
Q Consensus 237 ~~~~~~~l~~~~~~~~-~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a 315 (341)
++++++++ .+ .|++.+|||+|++|++++++++.+++|++++ +++||+||||+|+|||+++|++|+++++|
T Consensus 196 ~~~~~~~l------~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~~vdttGAGD~f~a~~~~~l~~g~~~~~a 266 (296)
T 2qhp_A 196 LQDKCWIL------LAKYNLKMLILTCGINGSYVFTPGVVSFQETPKV---PVADTVGAGDSFTAAFCASILNGKSVPEA 266 (296)
T ss_dssp HHHHHHHH------HHHTTCSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHHTCCHHHH
T ss_pred HHHHHHHH------HHhcCCCEEEEeecCCCeEEEECCeEEEeCCCCC---ccccCCCchHHHHHHHHHHHHcCCCHHHH
Confidence 88888888 44 3789999999999999999888888887654 78999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhccccCCCCC
Q 019448 316 VRAGCYTSHVIIQRSGCTYPEKP 338 (341)
Q Consensus 316 ~~~a~~~Aa~~v~~~g~~~p~~~ 338 (341)
+++|+++|+.++++.|+..+.++
T Consensus 267 ~~~a~~~aa~~v~~~G~~~~~~~ 289 (296)
T 2qhp_A 267 HKLAVEVSAYVCTQSGAMPELPV 289 (296)
T ss_dssp HHHHHHHHHHHHTSSSSSCCCCH
T ss_pred HHHHHHHHHHHHcCCCCCCCCcH
Confidence 99999999999999999655443
|
| >2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-42 Score=314.07 Aligned_cols=295 Identities=16% Similarity=0.173 Sum_probs=230.6
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i 84 (341)
++|+++|+.+.++..... ....+..+....+||+++|+|+++++ ||.++.++
T Consensus 13 ~~~~~~ge~l~~~~~~~~-------------------------~~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~i 64 (351)
T 2afb_A 13 MKVVTFGEIMLRLSPPDH-------------------------KRIFQTDSFDVTYGGAEANVAAFLAQ---MGLDAYFV 64 (351)
T ss_dssp CEEEEESCCEEEEECSTT-------------------------CCGGGCSEEEEEEECHHHHHHHHHHH---TTSEEEEE
T ss_pred ceEEEechhhheecCCCC-------------------------ccccccceeeEecCChHHHHHHHHHH---cCCCeEEE
Confidence 589999999988764221 11234456788999999999999998 46999999
Q ss_pred eeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccc-eeeccc---ccccCCcccCCCcchhhhhccceE
Q 019448 85 GCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERS-LVANLS---AANCYKSEHLKKPENWALVEKAKY 160 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~-~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~ 160 (341)
|.+|+|.+|+.+++.|++.||+++++...+.+|+.+++..++++|. ++.+.. +...++++++.. ...+.++++
T Consensus 65 ~~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~t~~~~v~~~~~~r~~~v~~~~~~~a~~~~~~~~~~~---~~~~~~~~~ 141 (351)
T 2afb_A 65 TKLPNNPLGDAAAGHLRKFGVKTDYIARGGNRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFDW---EKILDGARW 141 (351)
T ss_dssp EEECSSHHHHHHHHHHHHTTCBCTTEEECSSCCCEEEEECCBTTBCCEEEEECTTCTTTTCCGGGCCH---HHHTTTEEE
T ss_pred EEeCCCHHHHHHHHHHHHcCCcceeEEECCCcceEEEEEecCCCCcceEEEeCCCChhhhCChhhCCH---HHhhcCCCE
Confidence 9999999999999999999999998865556788776655556554 344332 223556665541 234689999
Q ss_pred EEEeccccccC---HHHHHHHHHHHHhCCCeEEEeCCc--hhHH-HHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCC--
Q 019448 161 FYIAGFFLTVS---PDSIQLVAEHAAANNKVFMMNLSA--PFIC-EFFKDALEKVLPYMDYIFGNETEARTFSKVQGW-- 232 (341)
Q Consensus 161 v~i~~~~~~~~---~~~~~~~~~~a~~~~~~v~~d~~~--~~~~-~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~-- 232 (341)
+|++++.+..+ .+.+.++++.++++++++++||.. ..|. ...++.+.++++++|++++|++|++.|++....
T Consensus 142 v~~~g~~~~~~~~~~~~~~~~~~~a~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~ 221 (351)
T 2afb_A 142 FHFSGITPPLGKELPLILEDALKVANEKGVTVSCDLNYRARLWTKEEAQKVMIPFMEYVDVLIANEEDIEKVLGISVEGL 221 (351)
T ss_dssp EEEETTSGGGSTTHHHHHHHHHHHHHHHTCEEEEECCCCTTTCCHHHHHHHHHHHGGGCSEEEECHHHHHHHHCCCCSCC
T ss_pred EEEeCcccccChhHHHHHHHHHHHHHHcCCEEEEeCCCchhcCChHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCcccc
Confidence 99998765433 377889999999999999999973 2232 124566788999999999999999999875321
Q ss_pred -------CCCCHHHHHHHHhcCCccccC-CccEEEEEeCCCce--------EEEECCeeEEEeceecCCCcccCCCCCch
Q 019448 233 -------ETDDVEEIALKLSQWPKASEI-RKRTAVITQGADPV--------VVAQDGKLKKFPVIVLPKDKLVDTNGAGD 296 (341)
Q Consensus 233 -------~~~d~~~~~~~l~~~~~~~~~-~~~~vvvt~G~~G~--------~~~~~~~~~~~~~~~~~~~~~vd~tGAGD 296 (341)
+.+++.++++.+ .+. |++.||||+|++|+ +++++++.+++|++++ +++|||||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~l------~~~~g~~~vvvT~G~~G~~~~~~~g~~~~~~~~~~~~~~~~v---~vvdttGAGD 292 (351)
T 2afb_A 222 DLKTGKLNREAYAKIAEEV------TRKYNFKTVGITLRESISATVNYWSVMVFENGQPHFSNRYEI---HIVDRVGAGD 292 (351)
T ss_dssp -------CHHHHHHHHHHH------HHHHCCSEEEEEEEECSCSSEEEEEEEEEETTEEEECCCEEE---ECSCCTTHHH
T ss_pred cccccccchhhHHHHHHHH------HHHcCCCEEEEEeCCcCccccccceeEEEeCCcEEEcCCCCC---ccCCCCCchH
Confidence 122355667776 443 78999999999975 7777888888888776 7899999999
Q ss_pred hhHHHHHHHHhcCCCHHHHHHHHHHHhhhhhhhccc-cCCCCCC
Q 019448 297 AFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGC-TYPEKPE 339 (341)
Q Consensus 297 af~ag~~~~l~~g~~~~~a~~~a~~~Aa~~v~~~g~-~~p~~~~ 339 (341)
+|+|||+++|++|+++++|+++|+++|++++++.|+ .+|+.+|
T Consensus 293 aF~ag~~~~l~~g~~l~~a~~~A~~~aa~~v~~~G~~~~~~~~e 336 (351)
T 2afb_A 293 SFAGALIYGSLMGFDSQKKAEFAAAASCLKHTIPGDFVVLSIEE 336 (351)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTSSSSSCCCCHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 999999999999999999999999999999999998 5676654
|
| >3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-42 Score=311.53 Aligned_cols=270 Identities=21% Similarity=0.255 Sum_probs=218.0
Q ss_pred CCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEE
Q 019448 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATS 82 (341)
Q Consensus 3 ~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~ 82 (341)
++++|+|+|++++|++..++ ++| .++..........+||+++|+|+++++ ||.++.
T Consensus 19 ~~~~v~viG~~~iD~~~~~~--------------------~~p-~g~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~ 74 (306)
T 3bf5_A 19 GMRFLAYFGHLNIDVLISVD--------------------SIP-REGSVNVKDLRPRFGGTAGNFAIVAQK---FRIPFD 74 (306)
T ss_dssp CCEEEEEECCCEEEEEEECS--------------------CCC-SSEEEECSEEEEEEEHHHHHHHHHHHH---TTCCCE
T ss_pred CCCcEEEECCceEEEEEecC--------------------CCC-CCceEECcceEecCCChHHHHHHHHHH---cCCCeE
Confidence 45689999999999999887 344 444444556778999999999999998 469999
Q ss_pred EEeeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccceEE
Q 019448 83 YIGCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYF 161 (341)
Q Consensus 83 ~i~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 161 (341)
++|.+|+| +|+.+++.|++.||+++++. .++.+|+.+++++++|+|+++.+.++...++ +++. .+++++
T Consensus 75 ~i~~vG~D-~G~~i~~~L~~~gV~~~~v~~~~~~~T~~~~~~~~~g~r~~~~~~ga~~~~~-~~l~--------~~~~~v 144 (306)
T 3bf5_A 75 LYSAVGMK-THREYLAMIESMGINTGHVEKFEDESGPICYIATDGKKQVSFMHQGAMAAWA-PQLA--------DEYEYV 144 (306)
T ss_dssp EEEEEETT-TCHHHHHHHHHTTCCCTTEEEETTCCCSEEEEEECSSCEEEEEECTHHHHCC-CCCC--------SCEEEE
T ss_pred EEEEEeCC-hHHHHHHHHHHcCCCchheEecCCCCCceEEEEEcCCeeEEEEeCChhhhhh-Hhhc--------CCCCEE
Confidence 99999999 99999999999999999874 5666799998888778888877777665665 3331 689999
Q ss_pred EEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHH
Q 019448 162 YIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIA 241 (341)
Q Consensus 162 ~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~ 241 (341)
|+++.. .+.++++.+++ ++++|+....|. ...+.++++++++|++++|++|++.+++....+..
T Consensus 145 ~~~~~~------~~~~~~~~a~~---~v~~D~~~~~~~-~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~------ 208 (306)
T 3bf5_A 145 HFSTGP------NYLDMAKSIRS---KIIFDPSQEIHK-YSKDELKKFHEISYMSIFNDHEYRVFREMTGLSSP------ 208 (306)
T ss_dssp EECSSS------SHHHHHHHCCS---EEEECCGGGGGG-SCHHHHHHHHHHCSEEEEEHHHHHHHHHHHCCSSC------
T ss_pred EECChH------HHHHHHHHhCC---cEEEcCchhhhh-ccHHHHHHHHhcCCEEEcCHHHHHHHhCCCCcCcc------
Confidence 998743 45666666654 899999854332 12455678889999999999999999875322110
Q ss_pred HHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHH
Q 019448 242 LKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCY 321 (341)
Q Consensus 242 ~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~ 321 (341)
.+ . +|||+|++|++++++++.+++|++++ + +|||||||+|+|||+++|++|+++++|+++|++
T Consensus 209 -~l------~------vvvT~G~~Ga~~~~~~~~~~~~~~~v---~-vDttGAGDaF~ag~~~~l~~g~~~~~a~~~A~~ 271 (306)
T 3bf5_A 209 -KV------T------TIVTNGERGSSLFMDGKKYDFPAIPS---S-GDTVGAGDSFRAGLYLALYNRRSIEKGMIYGTI 271 (306)
T ss_dssp -SS------C------EEEEEGGGEEEEEETTEEEEEECCCC---C-SCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred -cE------E------EEEeecccCeEEEeCCcEEEecCCcC---C-CCCCCccHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 12 1 99999999999998888888887754 7 999999999999999999999999999999999
Q ss_pred Hhhhhhhh--ccc--cCCCCCC
Q 019448 322 TSHVIIQR--SGC--TYPEKPE 339 (341)
Q Consensus 322 ~Aa~~v~~--~g~--~~p~~~~ 339 (341)
+|+++|++ .|+ .+|+.+|
T Consensus 272 ~aa~~v~~~~~G~~~~~p~~~e 293 (306)
T 3bf5_A 272 IAHHVIDDGIENFSLNMEDLER 293 (306)
T ss_dssp HHHHHHHHCSTTCCCCHHHHHH
T ss_pred HHHHHhccCCccccccCCCHHH
Confidence 99999999 998 4565443
|
| >1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-38 Score=282.43 Aligned_cols=257 Identities=15% Similarity=0.108 Sum_probs=200.1
Q ss_pred ccCCceEecCchHHHHHHHHHHHhcCCCcEEEEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccce
Q 019448 52 SKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSL 131 (341)
Q Consensus 52 ~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~ 131 (341)
+..+....+||++.|+|+++++ ||.++.++|.+|+|. +.+++.|++.||+++++.. ..+|+.+.++..+|++++
T Consensus 27 ~~~~~~~~~GG~~~NvA~~la~---LG~~~~~i~~vG~D~--~~~~~~L~~~gVd~~~v~~-~~~t~~~~i~~~~g~~~~ 100 (298)
T 1vk4_A 27 VDGKREIAYGGGVVMGAITSSL---LGVKTKVITKCTRED--VSKFSFLRDNGVEVVFLKS-PRTTSIENRYGSDPDTRE 100 (298)
T ss_dssp ETTEEEEEEECHHHHHHHHHHH---TTCEEEEEEEECTTT--GGGGTTTGGGTCEEEEEEC-SSCEEEEEEC-----CCE
T ss_pred ecCeEEEecCCHHHHHHHHHHH---cCCceEEEEEEcCCH--HHHHHHHHHcCCceEEEec-CCCcEEEEEEcCCCCeeE
Confidence 3345678999999999999998 469999999999997 7788999999999998865 345665544433688887
Q ss_pred eecccccccCCcccCCCcchhhhhccceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhH---H----HHHHH
Q 019448 132 VANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFI---C----EFFKD 204 (341)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~---~----~~~~~ 204 (341)
+...++...++++++.. ..+++++++++.. .+....+++.+++++.++++|+.+... . ...++
T Consensus 101 ~~~~~~~~~l~~~~~~~-------~~~~~v~~~~~~~---~~~~~~~~~~~~~~g~~v~~D~~~~~~~~~~~~~~~~~~~ 170 (298)
T 1vk4_A 101 SFLISAADPFTESDLAF-------IEGEAVHINPLWY---GEFPEDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWE 170 (298)
T ss_dssp EEEEECCCCCCGGGGGG-------CCSSEEEECCSST---TSSCGGGHHHHHHHCSEEEEETHHHHEEEETTEEEECCCT
T ss_pred EEeccccccCCHHHcCc-------CCCCEEEECCccc---ccccHHHHHHHHHcCCEEEEecCccccccccccccccchH
Confidence 77666666676666531 5789999987642 122245667778889999999963110 0 00112
Q ss_pred HHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecC
Q 019448 205 ALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLP 284 (341)
Q Consensus 205 ~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~ 284 (341)
.+.++++++|++++|++|++.|++. .+++++++.+ .+.|++.||||+ ++|++++++ +.+++|+++
T Consensus 171 ~~~~~l~~~dil~~N~~E~~~l~g~-----~~~~~~~~~l------~~~g~~~vvvT~-~~G~~~~~~-~~~~~~~~~-- 235 (298)
T 1vk4_A 171 MKEKYLKYLDLFKVDSREAETLTGT-----NDLRESCRII------RSFGAKIILATH-ASGVIVFDG-NFYEASFRS-- 235 (298)
T ss_dssp THHHHGGGCSEEEEEHHHHHHHHSC-----SCHHHHHHHH------HHTTCSSEEEEE-TTEEEEESS-SEEEEECCC--
T ss_pred HHHhhcccCCEEecCHHHHHHHhCC-----CCHHHHHHHH------HhcCCCEEEEEc-CCCcEEEeC-CEEEeccCC--
Confidence 3567899999999999999999873 4788888888 567889999999 999999877 777888654
Q ss_pred CCcccCCCCCchhhHHHHHHHHhc-CCCHHHHHHHHHHHhhhhhhhccc-cCCCCCCC
Q 019448 285 KDKLVDTNGAGDAFVGGFLSQLVQ-EKPIEECVRAGCYTSHVIIQRSGC-TYPEKPEF 340 (341)
Q Consensus 285 ~~~~vd~tGAGDaf~ag~~~~l~~-g~~~~~a~~~a~~~Aa~~v~~~g~-~~p~~~~~ 340 (341)
++++|||||||+|+|||+++|++ |+++++|+++|+++|+++|++.|+ ..|+.+|+
T Consensus 236 -v~vvDttGAGDaF~a~~~~~l~~~g~~~~~a~~~A~a~aa~~v~~~G~~~~~~~~el 292 (298)
T 1vk4_A 236 -WSLEGRTGRGDTCTAAFLVGFVFKKMSIEKATKFAAAVTSVKMRHPGPLRREDLEAI 292 (298)
T ss_dssp -SSGGGGTTHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHTTSSSSCCGGGGGGC
T ss_pred -cccCCCcCccHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHccCCCCCCCCHHHH
Confidence 48999999999999999999999 999999999999999999999999 44676665
|
| >2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-25 Score=202.67 Aligned_cols=222 Identities=17% Similarity=0.173 Sum_probs=153.4
Q ss_pred cEEEEeeeecCchhHHHHHHHHhcCcceeeeecC--CCCceeEEEEEeCCccceeecccccccCCcccCCCc-chhhh--
Q 019448 80 ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDE--SASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKP-ENWAL-- 154 (341)
Q Consensus 80 ~v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~--~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~-- 154 (341)
.+.++|.+|+|. |+.+ |+++||+++++... ...|+..+ ..+ ..++++++... +.+..
T Consensus 12 ~~~~~g~vG~D~-g~~i---L~~~GV~~~~v~~~~~~~~t~~~~------------~~g--~~l~~~~i~~~~~~~~~~~ 73 (312)
T 2yxt_A 12 SHVIRGYVGNRA-ATFP---LQVLGFEIDAVNSVQFSNHTGYAH------------WKG--QVLNSDELQELYEGLRLNN 73 (312)
T ss_dssp EEESSSCSTHHH-HHHH---HHHTTCEEEEEEEEEESSCTTSSC------------CCE--EECCHHHHHHHHHHHHHTT
T ss_pred cccCCCccchHh-hHHH---HHHcCCeEEEEEEEEecCCCCcCC------------ccC--ccCCHHHHHHHHHHHHhcC
Confidence 467889999998 9988 99999999987531 11222111 111 23444544320 01111
Q ss_pred hccceEEEEeccccccCHHHHHHHHHHHHhCCC--eEEEeCCch--------hH-HHHHHHHHHh-hcCCCcEEecCHHH
Q 019448 155 VEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNK--VFMMNLSAP--------FI-CEFFKDALEK-VLPYMDYIFGNETE 222 (341)
Q Consensus 155 l~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~--~v~~d~~~~--------~~-~~~~~~~~~~-~l~~~dvl~~n~~E 222 (341)
+.++++++++........+.+.++++.+++++. ++++||... .| .....+.+++ +++++|++++|++|
T Consensus 74 ~~~~~~v~~G~~~~~~~~~~~~~~~~~a~~~g~~~~vv~Dp~~~~~~~~sg~~~~~~~~~~~l~~~ll~~~dil~pN~~E 153 (312)
T 2yxt_A 74 MNKYDYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEKVVPLADIITPNQFE 153 (312)
T ss_dssp CCCCSEEEECCCCCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEEC--CCCEESSCTTHHHHHHHTTGGGCSEECCCHHH
T ss_pred CccCCEEEECCCCCHHHHHHHHHHHHHHHhhCCCCeEEECCCcCCCCCCCCCeeCCHHHHHHHHHHhhhhCCEEcCCHHH
Confidence 567899876432111113556688888888875 488997421 11 1123445654 89999999999999
Q ss_pred HHHHhhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCC------ceEEE-------EC-C----eeEEEeceecC
Q 019448 223 ARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGAD------PVVVA-------QD-G----KLKKFPVIVLP 284 (341)
Q Consensus 223 ~~~l~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~------G~~~~-------~~-~----~~~~~~~~~~~ 284 (341)
++.|++....+.+++.++++++ .+.|++.||||.|.. |++++ ++ + +.++++++++
T Consensus 154 a~~L~g~~~~~~~~~~~~~~~l------~~~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~v- 226 (312)
T 2yxt_A 154 AELLSGRKIHSQEEALRVMDML------HSMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDIRKV- 226 (312)
T ss_dssp HHHHHSCCCCSHHHHHHHHHHH------HHHSCSEEEECCCSCCCTTCTTEEEEEEEEEC----CCCCEEEEEEEEECC-
T ss_pred HHHHhCCCCCCHHHHHHHHHHH------HHcCCCEEEEecccCCCCCCCceEEEEEeccccccccccccceEEEeeccc-
Confidence 9999885433335667778887 567889999998876 47665 44 2 5677777654
Q ss_pred CCcccCCCCCchhhHHHHHHHHhc-CCCHHHHHHHHHHHhhhhhhh
Q 019448 285 KDKLVDTNGAGDAFVGGFLSQLVQ-EKPIEECVRAGCYTSHVIIQR 329 (341)
Q Consensus 285 ~~~~vd~tGAGDaf~ag~~~~l~~-g~~~~~a~~~a~~~Aa~~v~~ 329 (341)
++ ||+||||+|+|+|+++|++ |+++++|+++|+++|+.++++
T Consensus 227 --~v-dttGAGDaf~a~~~~~l~~~g~~l~~a~~~A~a~a~~~v~~ 269 (312)
T 2yxt_A 227 --DA-VFVGTGDLFAAMLLAWTHKHPNNLKVACEKTVSTLHHVLQR 269 (312)
T ss_dssp --SS-CCSSHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred --CC-CCCCchHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 55 9999999999999999999 999999999999999888864
|
| >2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-24 Score=191.19 Aligned_cols=227 Identities=14% Similarity=0.093 Sum_probs=158.1
Q ss_pred CcEEE-EeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCc-c-hhh-
Q 019448 79 GATSY-IGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKP-E-NWA- 153 (341)
Q Consensus 79 ~~v~~-i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~-~-~~~- 153 (341)
..... +|.+|.| ..+..|++.||++.++.. . ++.+ +|.+.+ .+ ..++++++... + ...
T Consensus 21 i~~~~~~g~~G~d----~~~~~l~~~Gv~~~~v~t-------~-i~~~~~g~~~~---~g--~~~~~~~~~~~~~~l~~~ 83 (283)
T 2ddm_A 21 VQSQVVYGSVGNS----IAVPAIKQNGLNVFAVPT-------V-LLSNTPHYDTF---YG--GAIPDEWFSGYLRALQER 83 (283)
T ss_dssp EEEEESSSSSTHH----HHHHHHHHTTCCEEEEEE-------E-EESSCTTSSCC---CE--EECCHHHHHHHHHHHHHT
T ss_pred EecccCCCcchHH----HHHHHHHHcCCeeeEEeE-------E-EeccCCCcCce---ee--eeCCHHHHHHHHHHHHhc
Confidence 45444 7788877 346788999999988742 1 1212 343331 11 23444443320 0 111
Q ss_pred -hhccceEEEEeccccccCHHHHHHHHHHHHh--CCCeEEEeCCch-----hHH-HH-HHHHHHhhcCCCcEEecCHHHH
Q 019448 154 -LVEKAKYFYIAGFFLTVSPDSIQLVAEHAAA--NNKVFMMNLSAP-----FIC-EF-FKDALEKVLPYMDYIFGNETEA 223 (341)
Q Consensus 154 -~l~~~~~v~i~~~~~~~~~~~~~~~~~~a~~--~~~~v~~d~~~~-----~~~-~~-~~~~~~~~l~~~dvl~~n~~E~ 223 (341)
.++++++++++........+.+.++++.+++ +++++++||... .|. .. .....+++++++|++++|++|+
T Consensus 84 ~~~~~~~~v~~G~l~~~~~~~~~~~~l~~a~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~E~ 163 (283)
T 2ddm_A 84 DALRQLRAVTTGYMGTASQIKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFEL 163 (283)
T ss_dssp TCCTTCCEEEECCCSCHHHHHHHHHHHHHHHTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEECCBHHHH
T ss_pred CCcccCCEEEECCcCCHHHHHHHHHHHHHHHhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEecCCHHHH
Confidence 3457899998654333334677888888887 789999997422 111 11 1222346889999999999999
Q ss_pred HHHhhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCC-------ceEEEECCeeEEEeceecCCCcccCCCCCch
Q 019448 224 RTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGAD-------PVVVAQDGKLKKFPVIVLPKDKLVDTNGAGD 296 (341)
Q Consensus 224 ~~l~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~-------G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGD 296 (341)
+.|++....+.++..++++++ .+.|++.||||.|++ |++++++++.++++++++ . +|++||||
T Consensus 164 ~~L~g~~~~~~~~~~~~a~~l------~~~g~~~Vvvt~G~~~~~~~~~G~~~~~~~~~~~~~~~~v---~-vdt~GAGD 233 (283)
T 2ddm_A 164 EILTGKNCRDLDSAIAAAKSL------LSDTLKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRV---K-TDLKGTGD 233 (283)
T ss_dssp HHHHTSCCSSHHHHHHHHHHH------CCSSCCEEEEEC-------CEEEEEEEETTEEEEEEEECC---C-CCCCCHHH
T ss_pred HHHhCCCCCCHHHHHHHHHHH------HHcCCCEEEEccccCccCCCceeEEEEeCCceEEEeecee---C-CCCCChHH
Confidence 999985433334567778887 667889999999999 889888888888887654 4 79999999
Q ss_pred hhHHHHHHHHhcCCCHHHHHHHHHHHhhhhhhhccc
Q 019448 297 AFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGC 332 (341)
Q Consensus 297 af~ag~~~~l~~g~~~~~a~~~a~~~Aa~~v~~~g~ 332 (341)
+|+|+|+++|++|+++++|+++|+++++.++++...
T Consensus 234 af~a~~~~~l~~g~~~~~A~~~A~a~a~~~v~~~~~ 269 (283)
T 2ddm_A 234 LFCAQLISGLLKGKALTDAVHRAGLRVLEVMRYTQQ 269 (283)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999987643
|
| >1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-23 Score=185.43 Aligned_cols=161 Identities=12% Similarity=0.110 Sum_probs=123.1
Q ss_pred ceEEEEeccccccCHHHHHHHHHHHHhCCCe-EEEeCCch------hHHHHHHHHHHh-hcCCCcEEecCHHHHHHHhhh
Q 019448 158 AKYFYIAGFFLTVSPDSIQLVAEHAAANNKV-FMMNLSAP------FICEFFKDALEK-VLPYMDYIFGNETEARTFSKV 229 (341)
Q Consensus 158 ~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~-v~~d~~~~------~~~~~~~~~~~~-~l~~~dvl~~n~~E~~~l~~~ 229 (341)
+|++++.. ..+.+.+..+++.+++.+.+ +++||... .|.....+.+.+ +++++|++++|+.|++.|++.
T Consensus 95 ~~~v~~G~---l~~~~~~~~~~~~~~~~~~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll~~~dil~pN~~Ea~~L~g~ 171 (288)
T 1jxh_A 95 IDTTKIGM---LAETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALLDA 171 (288)
T ss_dssp CSEEEECC---CCSHHHHHHHHHHHHHTTCCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBHHHHHHHHTC
T ss_pred CCEEEECC---CCCHHHHHHHHHHHHHCCCCeEEEcCcccCCCCCccCCHHHHHHHHHHHHhhCcEEcCCHHHHHHHcCC
Confidence 68887753 22678889999999999986 99998542 122222233554 789999999999999999875
Q ss_pred -cCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCc-----eEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHH
Q 019448 230 -QGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADP-----VVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 303 (341)
Q Consensus 230 -~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G-----~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~ 303 (341)
...+.++..++++++ .+.+++.||||.|++| ++++++++.++++++++ +++|++||||+|+|+|+
T Consensus 172 ~~~~~~~~~~~~a~~l------~~~g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~---~~vdttGAGD~f~a~~~ 242 (288)
T 1jxh_A 172 PHARTEQEMLAQGRAL------LAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRV---NTKNTHGTGCTLSAALA 242 (288)
T ss_dssp CCCCSHHHHHHHHHHH------HHTTCSEEEEBC---------CEEECSSCEEEC---CC---CCSCCBTHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH------HHhCCCEEEEeccCCCCCceeEEEEECCeEEEEecccc---CCCCCCCchHHHHHHHH
Confidence 333334566777887 5678899999999999 88887777777776544 78999999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHhhhhhhhc
Q 019448 304 SQLVQEKPIEECVRAGCYTSHVIIQRS 330 (341)
Q Consensus 304 ~~l~~g~~~~~a~~~a~~~Aa~~v~~~ 330 (341)
++|++|+++++|+++|+++++.++++.
T Consensus 243 a~l~~g~~~~~A~~~A~a~a~~~v~~~ 269 (288)
T 1jxh_A 243 ALRPRHRSWGETVNEAKAWLSAALAQA 269 (288)
T ss_dssp HHGGGSSSHHHHHHHHHHHHHHHHTTG
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999766
|
| >1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=5.2e-22 Score=173.62 Aligned_cols=162 Identities=16% Similarity=0.200 Sum_probs=126.1
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhCC-CeEEEeCCch------hHHHHHHHHH-HhhcCCCcEEecCHHHHHHHhh
Q 019448 157 KAKYFYIAGFFLTVSPDSIQLVAEHAAANN-KVFMMNLSAP------FICEFFKDAL-EKVLPYMDYIFGNETEARTFSK 228 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~-~~v~~d~~~~------~~~~~~~~~~-~~~l~~~dvl~~n~~E~~~l~~ 228 (341)
+.+.+++... .+.+.+..+++.+++++ .++++||... .|.....+.+ .++++++|++++|++|++.|++
T Consensus 70 ~~~~v~~G~l---~~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g 146 (258)
T 1ub0_A 70 PLHAAKTGAL---GDAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEALLG 146 (258)
T ss_dssp CCSEEEECCC---CSHHHHHHHHHHHHHTTCCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHHHC
T ss_pred CCCEEEECCc---CCHHHHHHHHHHHHhCCCCcEEECCeeecCCCCcccChHHHHHHHHhhcccCeEEeCCHHHHHHHhC
Confidence 3677776532 25677888889999988 8999998532 2222222334 4688999999999999999987
Q ss_pred hcCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCC-c----eEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHH
Q 019448 229 VQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGAD-P----VVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 303 (341)
Q Consensus 229 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~-G----~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~ 303 (341)
....+.++..++++++ .+.|++.||+|.|++ | ++++++++.++++++++ +++||+||||+|+|+|+
T Consensus 147 ~~~~~~~~~~~~a~~l------~~~g~~~vvvt~g~~~G~~~~~~~~~~~~~~~~~~~~~---~~~dt~GaGD~f~a~~~ 217 (258)
T 1ub0_A 147 RPIRTLKEAEEAAKAL------LALGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPRV---HTRNTHGTGCTLSAAIA 217 (258)
T ss_dssp SCCCSHHHHHHHHHHH------HTTSCSCEEEEEEECC---EEEEEEETTEEEEEEECCC---CCSCCTTHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH------HHcCCCEEEEccCCCCCCceEEEEEeCCeEEEEecccc---CCCCCCChHHHHHHHHH
Confidence 5433334566778887 556888999999998 8 78888888788876544 78999999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHhhhhhhhc
Q 019448 304 SQLVQEKPIEECVRAGCYTSHVIIQRS 330 (341)
Q Consensus 304 ~~l~~g~~~~~a~~~a~~~Aa~~v~~~ 330 (341)
++|++|+++++|+++|+++++.++++.
T Consensus 218 ~~l~~g~~~~~a~~~a~~~~~~~~~~~ 244 (258)
T 1ub0_A 218 ALLAKGRPLAEAVAEAKAYLTRALKTA 244 (258)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998754
|
| >2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.83 E-value=5.7e-20 Score=161.82 Aligned_cols=162 Identities=20% Similarity=0.189 Sum_probs=127.7
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhCCC-eEEEeCCch------hHHHHHHHHHH-hhcCCCcEEecCHHHHHHHhh
Q 019448 157 KAKYFYIAGFFLTVSPDSIQLVAEHAAANNK-VFMMNLSAP------FICEFFKDALE-KVLPYMDYIFGNETEARTFSK 228 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~-~v~~d~~~~------~~~~~~~~~~~-~~l~~~dvl~~n~~E~~~l~~ 228 (341)
+.|++++... .+.+.+..+++.+++.+. ++++||... .+.+...+.+. ++++++|+++||..|++.|++
T Consensus 74 ~~d~v~~G~l---~~~~~~~~~~~~~~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L~g 150 (271)
T 2i5b_A 74 GVDAMKTGML---PTVDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQLSG 150 (271)
T ss_dssp CCSEEEECCC---CSHHHHHHHHHHHHHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHHHT
T ss_pred CCCEEEECCC---CCHHHHHHHHHHHHhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHHhC
Confidence 5788888542 246788888999999888 599998421 11222334454 788999999999999999998
Q ss_pred hc-CCCCCCHHHHHHHHhcCCccccCCccEEEEEeCC--Cce----EEEECCeeEEEeceecCCCcccCCCCCchhhHHH
Q 019448 229 VQ-GWETDDVEEIALKLSQWPKASEIRKRTAVITQGA--DPV----VVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 301 (341)
Q Consensus 229 ~~-~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~--~G~----~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag 301 (341)
.. ..+.++..++++++ .+.+.+.||+|.|. +|+ +++++++.++++.+.+ +++|++||||+|+|+
T Consensus 151 ~~~~~~~~~~~~~a~~l------~~~g~~~Vvvt~g~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~dt~GaGD~f~a~ 221 (271)
T 2i5b_A 151 MDELKTVDDMIEAAKKI------HALGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMI---DTPYTHGAGCTFSAA 221 (271)
T ss_dssp CCCCCSHHHHHHHHHHH------HTTTCSEEEEECGGGSCSSSEEEEEECSSCEEEEEECCC---CCSCCBTHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHH------HHhCCCEEEEcCCCCCCCCceEEEEEeCCeEEEEecccc---CCCCCCChHHHHHHH
Confidence 54 33334566778887 56788999999999 784 6777777777776544 789999999999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHhhhhhhhc
Q 019448 302 FLSQLVQEKPIEECVRAGCYTSHVIIQRS 330 (341)
Q Consensus 302 ~~~~l~~g~~~~~a~~~a~~~Aa~~v~~~ 330 (341)
|+++|++|+++++|+++|+++++.++++.
T Consensus 222 ~~~~l~~g~~~~~A~~~A~~~~~~~~~~~ 250 (271)
T 2i5b_A 222 VTAELAKGAEVKEAIYAAKEFITAAIKES 250 (271)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999865
|
| >3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=7.5e-20 Score=162.36 Aligned_cols=167 Identities=11% Similarity=0.116 Sum_probs=127.2
Q ss_pred hccceEEEEecccc-ccCHHHHHHHHHHHHhCC--CeEEEeC----C--chhHHHHHHHHHHh-hcCCCcEEecCHHHHH
Q 019448 155 VEKAKYFYIAGFFL-TVSPDSIQLVAEHAAANN--KVFMMNL----S--APFICEFFKDALEK-VLPYMDYIFGNETEAR 224 (341)
Q Consensus 155 l~~~~~v~i~~~~~-~~~~~~~~~~~~~a~~~~--~~v~~d~----~--~~~~~~~~~~~~~~-~l~~~dvl~~n~~E~~ 224 (341)
+.+.|++.+ |+.. ....+.+.++++.+++++ .++++|| . ...|.+...+.+++ +++++|+++||..|++
T Consensus 75 l~~~d~v~~-G~l~~~~~~~~v~~~l~~~~~~~~~~~vv~DPVm~~~~~~~~~~~~~~~~l~~~ll~~~diitpN~~E~~ 153 (289)
T 3pzs_A 75 LKDCDAVLS-GYIGSPEQGSHILAAVAQVKQANPDAWYFCDPVMGHPEKGCIVAPGVAEFFCNEALPASDMIAPNLLELE 153 (289)
T ss_dssp GGGCCEEEE-CCCSSHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCHHHHHHHHHTHHHHCSEECCCHHHHH
T ss_pred ccCCCEEEE-CCCCCHHHHHHHHHHHHHHHhhCCCCeEEEcCccccCCCCcccCHHHHHHHHHHhhccCCEEeCCHHHHH
Confidence 357888654 4432 223467788888888766 7899997 2 12344444555664 7899999999999999
Q ss_pred HHhhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEEeC-CCce-------EEEECCeeEEEeceecCCCcccCCCCCch
Q 019448 225 TFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQG-ADPV-------VVAQDGKLKKFPVIVLPKDKLVDTNGAGD 296 (341)
Q Consensus 225 ~l~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G-~~G~-------~~~~~~~~~~~~~~~~~~~~~vd~tGAGD 296 (341)
.|++....+.++..++++++ .+.|++.||||.| .+|+ +++++++.++++.+.++ ..++|++|+||
T Consensus 154 ~L~g~~~~~~~~~~~aa~~l------~~~g~~~Vvvt~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~dt~GaGD 226 (289)
T 3pzs_A 154 QLSGERVENVEQAVQVARSL------CARGPKVVLVKHLSRAGYHADCFEMLLVTADDAWHICRPLVD-FGKRQPVGVGD 226 (289)
T ss_dssp HHHTSCCCSHHHHHHHHHHH------HTTSCSEEEECCCGGGSSCTTEEEEEEECSSCEEEEEEECCC-CTTSCCTTHHH
T ss_pred HHhCCCCCCHHHHHHHHHHH------HHHCCCEEEEecccCCCCCCCeEEEEEEeCCeEEEEEeeeec-CCCCCCCcHHH
Confidence 99986544445677788888 6678999999985 5786 77777777777766542 12389999999
Q ss_pred hhHHHHHHHHhcCCCHHHHHHHHHHHhhhhhhh
Q 019448 297 AFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQR 329 (341)
Q Consensus 297 af~ag~~~~l~~g~~~~~a~~~a~~~Aa~~v~~ 329 (341)
+|+|+|+++|++|+++++|+++|+++++.++++
T Consensus 227 ~f~a~~~~~l~~g~~~~~A~~~A~~~~~~~i~~ 259 (289)
T 3pzs_A 227 LTSGLLLVNLLKGEPLDKALEHVTAAVYEVMLK 259 (289)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998888764
|
| >3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=6.5e-19 Score=155.45 Aligned_cols=161 Identities=17% Similarity=0.124 Sum_probs=128.2
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhC-CCeEEEeCCc----hhH---HHHHHHHHHhhcCCCcEEecCHHHHHHHhh
Q 019448 157 KAKYFYIAGFFLTVSPDSIQLVAEHAAAN-NKVFMMNLSA----PFI---CEFFKDALEKVLPYMDYIFGNETEARTFSK 228 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~a~~~-~~~v~~d~~~----~~~---~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~ 228 (341)
+.|.+.++-. .+++.+..+.+.+++. +.++++||-. ..| .+...+.++++++++|+++||..|++.|++
T Consensus 74 ~~daik~G~l---~s~~~i~~v~~~l~~~~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~~adiitpN~~Ea~~L~g 150 (282)
T 3h74_A 74 HFDQALIGYV---GSVALCQQITTYLEQQTLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQADVILPNTTEAALLTG 150 (282)
T ss_dssp CCSEEEECCC---CSHHHHHHHHHHHHHSCCSEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCCHHHHHHHHT
T ss_pred ccCEEEECCC---CCHHHHHHHHHHHHHCCCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhccCCEECCCHHHHHHHhC
Confidence 5788887532 2566777777766664 5789999931 112 344556678899999999999999999998
Q ss_pred hcCCCCCCHHHHHHHHhcCCcccc-CCc-cEEEEEeCC----CceEEEE-CCeeEEEeceecCCCcccCCCCCchhhHHH
Q 019448 229 VQGWETDDVEEIALKLSQWPKASE-IRK-RTAVITQGA----DPVVVAQ-DGKLKKFPVIVLPKDKLVDTNGAGDAFVGG 301 (341)
Q Consensus 229 ~~~~~~~d~~~~~~~l~~~~~~~~-~~~-~~vvvt~G~----~G~~~~~-~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag 301 (341)
....+.++.+++++++ .+ .|+ +.||||.|. .|+++++ +++.++++.+.+ .+|++|+||+|+|+
T Consensus 151 ~~~~~~~~~~~aa~~L------~~~~g~~~~Vvvt~G~~~~~~g~~~~~~~~~~~~~~~~~v----~~dt~GaGD~fsaa 220 (282)
T 3h74_A 151 APYQVTPDLEVILPAL------QAQLKTGAHAVITDVQRADQIGCAWLDEAGHVQYCGARRL----PGHYNGTGDTLAAV 220 (282)
T ss_dssp CCCCSSCCHHHHHHHH------HTTSCTTCEECEEEEEETTEEEEEEECTTSCEEEEEEECC----SSCCTTHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH------HHHhCCCCEEEEEecCCCCceEEEEEeCCCeEEEEEecCC----CCCCcCHHHHHHHH
Confidence 7655567899999998 55 788 899999984 7888885 666777776543 38999999999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHhhhhhhhc
Q 019448 302 FLSQLVQEKPIEECVRAGCYTSHVIIQRS 330 (341)
Q Consensus 302 ~~~~l~~g~~~~~a~~~a~~~Aa~~v~~~ 330 (341)
|+++|++|+++++|+++|+++++.++++.
T Consensus 221 i~a~l~~g~~l~~A~~~A~~~~~~ai~~~ 249 (282)
T 3h74_A 221 IAGLLGRGYPLAPTLARANQWLNMAVAET 249 (282)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998753
|
| >3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.6e-18 Score=153.69 Aligned_cols=163 Identities=13% Similarity=0.061 Sum_probs=121.7
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCch----hH---HHHHHHHHHhhcCCCcEEecCHHHHHHHhhh
Q 019448 157 KAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAP----FI---CEFFKDALEKVLPYMDYIFGNETEARTFSKV 229 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~----~~---~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~ 229 (341)
..|.+.++-.......+.+.++++.+++.+.++++||... .| .+...+.++++++++|+++||..|++.|++.
T Consensus 77 ~~~aik~G~l~s~~~i~~v~~~l~~~~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~adiitpN~~Ea~~L~g~ 156 (291)
T 3mbh_A 77 QFDAIYTGYLGSPRQIQIVSDFIKDFRQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKADVITPNLTELFYLLDE 156 (291)
T ss_dssp CCSEEEECCCSSTTHHHHHHHHHHHHCCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCBHHHHHHHHTC
T ss_pred ccCEEEECCCCCHHHHHHHHHHHHHhcCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCCEEeCCHHHHHHHhCC
Confidence 5678887432111123556666666655678999999432 12 2445556788999999999999999999986
Q ss_pred cCC---CCCCHHHHHHHHhcCCccccCCccEEEEEeC-------CCceEEEEC--CeeEEEeceecCCCcccCCCCCchh
Q 019448 230 QGW---ETDDVEEIALKLSQWPKASEIRKRTAVITQG-------ADPVVVAQD--GKLKKFPVIVLPKDKLVDTNGAGDA 297 (341)
Q Consensus 230 ~~~---~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G-------~~G~~~~~~--~~~~~~~~~~~~~~~~vd~tGAGDa 297 (341)
... +.++.+++++++ .+.|++.||||.| ..|++++++ ++.++++.+.+ . +|++|+||+
T Consensus 157 ~~~~~~~~~~~~~aa~~L------~~~g~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~~---~-~dt~GaGD~ 226 (291)
T 3mbh_A 157 PYKADSTDEELKEYLRLL------SDKGPQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPYL---P-AHYPGTGDT 226 (291)
T ss_dssp CCCSCCCHHHHHHHHHHH------HHTSCSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEESCC---G-GGSTTHHHH
T ss_pred CCCCCCCHHHHHHHHHHH------HhhCCCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEeccc---C-CCCCChHHH
Confidence 432 234567788888 6678999999955 357788876 34666665432 4 899999999
Q ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHhhhhhhh
Q 019448 298 FVGGFLSQLVQEKPIEECVRAGCYTSHVIIQR 329 (341)
Q Consensus 298 f~ag~~~~l~~g~~~~~a~~~a~~~Aa~~v~~ 329 (341)
|+|+|+++|++|+++++|+++|+++++.++++
T Consensus 227 f~aai~a~l~~g~~l~~A~~~A~~~~~~ai~~ 258 (291)
T 3mbh_A 227 FTSVITGSLMQGDSLPMALDRATQFILQGIRA 258 (291)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988865
|
| >3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.1e-18 Score=153.45 Aligned_cols=163 Identities=14% Similarity=0.080 Sum_probs=117.0
Q ss_pred ccceEEEEeccccccCHHHHHHHHHHHHhCC------CeEEEeCCc----hhHH-HHHHHHHHhhcCCCcEEecCHHHHH
Q 019448 156 EKAKYFYIAGFFLTVSPDSIQLVAEHAAANN------KVFMMNLSA----PFIC-EFFKDALEKVLPYMDYIFGNETEAR 224 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~------~~v~~d~~~----~~~~-~~~~~~~~~~l~~~dvl~~n~~E~~ 224 (341)
.++|++.++-.......+.+.++++.+++++ .++++||-- ..|. +...+.++++++++|+++||..|++
T Consensus 75 ~~~daV~tG~l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~~~~~~~~~~Ll~~adiitPN~~Ea~ 154 (300)
T 3zs7_A 75 SNYRYILTGYINNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCKKEVLDAYRELVPLADIVTPNYFEAS 154 (300)
T ss_dssp GGCSEEEECCCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC---------CTHHHHHHHHGGGCSEECCCHHHHH
T ss_pred ccCCEEEECCCCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecCHHHHHHHHHHhhhCCEecCCHHHHH
Confidence 4788876643221222355667777776554 689999921 1222 2345567779999999999999999
Q ss_pred HHhhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCc----e--EEE-EC------CeeEEEeceecCCCcccCC
Q 019448 225 TFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADP----V--VVA-QD------GKLKKFPVIVLPKDKLVDT 291 (341)
Q Consensus 225 ~l~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G----~--~~~-~~------~~~~~~~~~~~~~~~~vd~ 291 (341)
.|++....+.++..+++++| .+.|++.||||.|..| + .++ .. ++.++++.+.+ +. |+
T Consensus 155 ~L~g~~~~~~~~~~~aa~~L------~~~G~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~v---~~-~~ 224 (300)
T 3zs7_A 155 LLSGVTVNDLSSAILAADWF------HNCGVAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRFSGVVPYH---EG-RY 224 (300)
T ss_dssp HHHSSCCCSHHHHHHHHHHH------HHHTCSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEEEEEEECC---SS-CB
T ss_pred HHhCCCCCCHHHHHHHHHHH------HHhCCCEEEEecCcCCCCCceEEEEEeccccccCCCeEEEEEeccC---CC-CC
Confidence 99986544445677788888 6678999999999887 2 333 34 46677776554 33 89
Q ss_pred CCCchhhHHHHHHHHhcCCCHHHHHHHHHHHhhhhhhh
Q 019448 292 NGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQR 329 (341)
Q Consensus 292 tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~Aa~~v~~ 329 (341)
+|+||+|+|+|+++| +|+++++|+++|+++...++++
T Consensus 225 ~GtGD~fsaal~a~l-~g~~~~~Av~~A~~~v~~~i~~ 261 (300)
T 3zs7_A 225 TGTGDVFAACLLAFS-HSHPMDVAIGKSMAVLQELIIA 261 (300)
T ss_dssp TTHHHHHHHHHHHHH-TTSCHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 9999999999999997777753
|
| >1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=9.5e-16 Score=134.45 Aligned_cols=165 Identities=15% Similarity=0.084 Sum_probs=110.5
Q ss_pred hhhccceEEEEeccccc-cCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC--CCcEEecCHHHHHHHhhh
Q 019448 153 ALVEKAKYFYIAGFFLT-VSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP--YMDYIFGNETEARTFSKV 229 (341)
Q Consensus 153 ~~l~~~~~v~i~~~~~~-~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~E~~~l~~~ 229 (341)
+.+..++++++..-.+. ...+.+..+++.+++.++++++||..........+..+++++ +.|+|+||..|+..|++.
T Consensus 54 ~~~~~a~~lvi~~G~~~~~~~~~~~~~~~~a~~~~~pvVlDp~g~~~~~~~~~~~~~ll~~~~~~vitPN~~E~~~L~g~ 133 (272)
T 1ekq_A 54 DMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAHTVGV 133 (272)
T ss_dssp HHHHHSSEEEEECTTCCHHHHHHHHHHHHHHHHTTCCEEEECTTBTTBHHHHHHHHHHHHHSCCSEEEECHHHHHHHCC-
T ss_pred HHHHhCCEEEEECCCCCHHHHHHHHHHHHHHHhcCCeEEEeCCCcCcccchHHHHHHHHccCCCeEECCCHHHHHHHhCC
Confidence 45677899988432221 123567778888889999999999743211111233345665 899999999999999875
Q ss_pred c-C--------CCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHH
Q 019448 230 Q-G--------WETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 300 (341)
Q Consensus 230 ~-~--------~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~a 300 (341)
. . .+.++..++++++. +.....||+| |+.+ +++++++.++++... ....|++|+||+|.|
T Consensus 134 ~~~~~~gvd~~~~~~~~~~aa~~l~------~~~~~vVv~~-G~~~-~i~~~~~~~~~~~~~---~~~~~ttGaGD~lag 202 (272)
T 1ekq_A 134 TDWLIKGVDAGEGGGDIIRLAQQAA------QKLNTVIAIT-GEVD-VIADTSHVYTLHNGH---KLLTKVTGAGCLLTS 202 (272)
T ss_dssp --------------HHHHHHHHHHH------HHHTSEEEEC-SSSE-EEECSSCEEEECCCC---GGGGGSTTHHHHHHH
T ss_pred CcccccCccCCCCHHHHHHHHHHHH------HHcCCEEEEE-CCCC-EEEeCCEEEEEcCCC---ccccCccCchHHHHH
Confidence 3 2 12334556777763 3323344555 8887 555666677776532 366799999999988
Q ss_pred HHHHHHhcCCCHHHHHHHHHH----Hhhhhhh
Q 019448 301 GFLSQLVQEKPIEECVRAGCY----TSHVIIQ 328 (341)
Q Consensus 301 g~~~~l~~g~~~~~a~~~a~~----~Aa~~v~ 328 (341)
++.+.+.+|.++.+|+++|+. ++..+.+
T Consensus 203 ~iaa~la~g~~~~~A~~~A~~~~~~A~~~a~~ 234 (272)
T 1ekq_A 203 VVGAFCAVEENPLFAAIAAISSYGVAAQLAAQ 234 (272)
T ss_dssp HHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 888888889999999999986 5554444
|
| >3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.1e-14 Score=139.93 Aligned_cols=159 Identities=16% Similarity=0.200 Sum_probs=114.0
Q ss_pred cceEEEEeccccccCHHH---HHHHHHHHHhCCCeEEEeCCc------hhHHHHHHHHHH-hhcCCCcEEecCHHHHHHH
Q 019448 157 KAKYFYIAGFFLTVSPDS---IQLVAEHAAANNKVFMMNLSA------PFICEFFKDALE-KVLPYMDYIFGNETEARTF 226 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~---~~~~~~~a~~~~~~v~~d~~~------~~~~~~~~~~~~-~~l~~~dvl~~n~~E~~~l 226 (341)
..|.+.++.. +.+. +.++++..++.+.++++||-. ..+.+...+.++ ++++.+|++.||..|++.|
T Consensus 91 ~~daIkiG~l----s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~~~~~~~~l~~~Ll~~a~iitPN~~Ea~~L 166 (550)
T 3rm5_A 91 KCNVIKTGML----TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLAGKDIVSLITEKVAPFADILTPNIPECYKL 166 (550)
T ss_dssp CCSEEEECSC----CHHHHHHHHHHHHHHGGGSCEEEECCCC---------CTTHHHHHHHHTGGGCSEECCBHHHHHHH
T ss_pred CCCEEEECCC----CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCCCHHHHHHHHHHhhCcceEEecCHHHHHHH
Confidence 6788888643 5554 444555554458899999942 112222334455 7889999999999999999
Q ss_pred hhhc--CCCCCCHHHHHHHHhcCCccccCCc-cEEEEEeCCCc--------e--EEE--ECCeeEEEeceecCCCcccCC
Q 019448 227 SKVQ--GWETDDVEEIALKLSQWPKASEIRK-RTAVITQGADP--------V--VVA--QDGKLKKFPVIVLPKDKLVDT 291 (341)
Q Consensus 227 ~~~~--~~~~~d~~~~~~~l~~~~~~~~~~~-~~vvvt~G~~G--------~--~~~--~~~~~~~~~~~~~~~~~~vd~ 291 (341)
++.. ..+.++..++++++ .+.+. +.||||.|..+ + +++ .+++.++++.+.+ ..+|+
T Consensus 167 ~g~~~~i~~~~d~~~aa~~L------~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~~~~~~~~v---~~~~t 237 (550)
T 3rm5_A 167 LGEERKVNGLQDIFQIAKDL------AKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKFIIFKGNFV---NTTHT 237 (550)
T ss_dssp HSCCCCCCSSHHHHHHHHHH------HHHHCCSCEEEEECC-------CCEEEEEEEETTTTEEEEEEEECC---CCSCC
T ss_pred hCCCCCCCCHHHHHHHHHHH------HHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCeEEEEEecCc---CCCCC
Confidence 9853 23345677888888 55555 78999998753 3 455 3566677776544 67899
Q ss_pred CCCchhhHHHHHHHHhcCCCHHHHHHHHHHHhhhhhh
Q 019448 292 NGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQ 328 (341)
Q Consensus 292 tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~Aa~~v~ 328 (341)
+|+||+|+|++++.|++|+++++|+++|+..-..+++
T Consensus 238 ~GtGD~fsaaiaa~La~G~~l~eAv~~A~~~v~~ai~ 274 (550)
T 3rm5_A 238 HGTGCTLASAIASNLARGYSLPQSVYGGIEYVQNAVA 274 (550)
T ss_dssp BTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred cChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999976555554
|
| >1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A | Back alignment and structure |
|---|
Probab=99.27 E-value=6.2e-11 Score=103.18 Aligned_cols=159 Identities=15% Similarity=0.081 Sum_probs=106.5
Q ss_pred hhhhhccceEEEEeccccccCHH---HHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC-CCcEEecCHHHHHHH
Q 019448 151 NWALVEKAKYFYIAGFFLTVSPD---SIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP-YMDYIFGNETEARTF 226 (341)
Q Consensus 151 ~~~~l~~~~~v~i~~~~~~~~~~---~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~-~~dvl~~n~~E~~~l 226 (341)
..+.++.+|++++..-.+ +.+ .+..+++.+++.++|+++||..........+...++++ ..+++.||..|+..|
T Consensus 50 ~~~~~~~~dalvi~~G~~--~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~~~~~~~~~~~ll~~~~~vITPN~~E~~~L 127 (265)
T 1v8a_A 50 LEEMIRLADAVVINIGTL--DSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISAL 127 (265)
T ss_dssp HHHHHHHCSEEEEECTTC--CHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHH
T ss_pred HHHHHHHCCEEEEEECCC--CHHHHHHHHHHHHHHHHcCCcEEEcCccccccccCHHHHHHHHHhCCcEEcCCHHHHHHH
Confidence 345678899999964322 333 55667778888999999999752211111222233332 289999999999999
Q ss_pred hhhcC----CC----C-CCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchh
Q 019448 227 SKVQG----WE----T-DDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDA 297 (341)
Q Consensus 227 ~~~~~----~~----~-~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDa 297 (341)
++... .+ . ++..++++.+. +.+...||+| |..+. +++++..+.++... ....+++|+||+
T Consensus 128 ~g~~~~~~gvd~~~~~~~~~~~aa~~la------~~~~~~Vvlk-G~~d~-i~~~~~~~~~~~g~---~~~~~~~GtGD~ 196 (265)
T 1v8a_A 128 LGEEGKTRGVDSLEYGEEEAKKLTMNAA------REFNTTVAVT-GAVDY-VSDGRRTFAVYNGH---ELLGRVTGTGCM 196 (265)
T ss_dssp HHHHC----------CHHHHHHHHHHHH------HHTTSEEEEE-SSSEE-EECSSCEEEECCCC---GGGGGSTTHHHH
T ss_pred hCCcccccCcCcccccHHHHHHHHHHHH------HHhCcEEEEc-CCCcE-EEcCCEEEEEcCCC---cCcCCccChhHH
Confidence 88642 11 1 34566777773 3333456666 87664 45666666666432 245599999999
Q ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHh
Q 019448 298 FVGGFLSQLVQEKPIEECVRAGCYTS 323 (341)
Q Consensus 298 f~ag~~~~l~~g~~~~~a~~~a~~~A 323 (341)
|.|.+.+.+.+|.+ .+|+..|...-
T Consensus 197 Lsg~iaa~lA~g~~-~~Aa~~a~~~~ 221 (265)
T 1v8a_A 197 VAALTGAFVAVTEP-LKATTSALVTF 221 (265)
T ss_dssp HHHHHHHHHTTSCH-HHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCC-HHHHHHHHHHH
Confidence 99999999999999 88888776543
|
| >3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.99 E-value=2e-09 Score=95.56 Aligned_cols=156 Identities=13% Similarity=0.102 Sum_probs=94.0
Q ss_pred hhhccceEEEEeccccccCHHHHHHHHHHHHh--CCCeEEEeCCchhHHHHHHHHHHhh-c-CCCcEEecCHHHHHHHhh
Q 019448 153 ALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAA--NNKVFMMNLSAPFICEFFKDALEKV-L-PYMDYIFGNETEARTFSK 228 (341)
Q Consensus 153 ~~l~~~~~v~i~~~~~~~~~~~~~~~~~~a~~--~~~~v~~d~~~~~~~~~~~~~~~~~-l-~~~dvl~~n~~E~~~l~~ 228 (341)
..++..|++.++. .+..+.+....+.+..+. .+.++++|+.......... .+ + +..++|+||..|+..|++
T Consensus 121 ~~~~~~dav~IG~-Gl~~~~~~~~~v~~~l~~~~~~~pvVlDa~g~~ll~~~~----~l~L~~~~~viTPN~~E~~~L~g 195 (311)
T 3bgk_A 121 EQITAADVVLMGP-GLAEDDLAQTTFDVVWQAIEPKQTLIIDGSAINLLAKRK----PAIWPTKQIILTPHQKEWERLSG 195 (311)
T ss_dssp HHHHHCSEEEECT-TCCSSHHHHHHHHHHHHHCCTTSEEEEETHHHHHHHHCC-----CCCSCSCEEEECCSCC-CTTTC
T ss_pred HHhccCCEEEEcC-CCCCCHHHHHHHHHHHHHcCCCCeEEEeCChhhhhccCh----hhcCCCCCEEECCcHHHHHHHhC
Confidence 4456789999963 122234333333333333 3789999996543211100 12 3 468899999999999987
Q ss_pred hcCCCC-CCH-HHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHH
Q 019448 229 VQGWET-DDV-EEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQL 306 (341)
Q Consensus 229 ~~~~~~-~d~-~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l 306 (341)
....+. ++. .++++++ .+ + .+|+..| .+.++++++.. ++... .....+++|+||++ +|+++++
T Consensus 196 ~~~~~~~~d~~~~aa~~l------~~-g--~~VvlkG-~~~~i~~~~~~-~~~~~---~~~~~~t~GtGD~L-ag~iaa~ 260 (311)
T 3bgk_A 196 LTIPEQIEAATQTALAHF------PK-E--TILVAKS-HQTKIYQGQKI-GHIQV---GGPYQATGGMGDTL-AGMIAGF 260 (311)
T ss_dssp CCSTTCCHHHHHHHHTTS------CT-T--CEEEECS-SSCEEEETTEE-EEECC---CCGGGCSTTHHHHH-HHHHHHH
T ss_pred CCCCcchhhHHHHHHHHH------hc-C--CEEEEeC-CCeEEEECCEE-EEECC---CCCCCCCCcHHHHH-HHHHHHH
Confidence 543222 133 4455554 33 3 3455556 56667764444 44433 33678999999997 5555555
Q ss_pred -hc-CCCHHHHHHHHHHHhhhhhh
Q 019448 307 -VQ-EKPIEECVRAGCYTSHVIIQ 328 (341)
Q Consensus 307 -~~-g~~~~~a~~~a~~~Aa~~v~ 328 (341)
.+ |.++.+|+.+|+.+.+..-+
T Consensus 261 lA~~g~~~~eA~~~A~~~~~~ag~ 284 (311)
T 3bgk_A 261 VAQFHTDRFEVAAAAVFLHSYIAD 284 (311)
T ss_dssp HHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHccCCCHHHHHHHHHHHHHHHHH
Confidence 68 99999999999877666443
|
| >2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A | Back alignment and structure |
|---|
Probab=98.99 E-value=1.5e-09 Score=96.34 Aligned_cols=154 Identities=18% Similarity=0.153 Sum_probs=92.7
Q ss_pred hhhccceEEEEeccccccCHHHHHHHHHHHHh--CCCeEEEeCCchhHHHHHHHHHHhhc--CCCcEEecCHHHHHHHhh
Q 019448 153 ALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAA--NNKVFMMNLSAPFICEFFKDALEKVL--PYMDYIFGNETEARTFSK 228 (341)
Q Consensus 153 ~~l~~~~~v~i~~~~~~~~~~~~~~~~~~a~~--~~~~v~~d~~~~~~~~~~~~~~~~~l--~~~dvl~~n~~E~~~l~~ 228 (341)
..++..|++.++. .+..+.+....+.+..+. .+.++++|+.......... +++ +..++|.||..|+..|++
T Consensus 107 ~~~~~~dav~IG~-Gl~~~~~~~~~v~~~l~~~~~~~pvVlDa~g~~ll~~~~----~~l~~~~~~viTPN~~E~~~L~g 181 (310)
T 2r3b_A 107 NVVEQADVILIGP-GLGLDATAQQILKMVLAQHQKQQWLIIDGSAITLFSQGN----FSLTYPEKVVFTPHQMEWQRLSH 181 (310)
T ss_dssp HHHHHCSEEEECT-TCCSSHHHHHHHHHHHHHCCTTCEEEEETHHHHHHHHTT----CCCSSGGGEEEECCHHHHHHHHC
T ss_pred HHhccCCEEEEeC-CCCCCHHHHHHHHHHHHhcCCCCcEEEcCCcchhcccch----hhhcCCCCEEEcCCHHHHHHHhC
Confidence 3456788999863 122233333333333333 4789999996543211100 223 357899999999999987
Q ss_pred hcCCCCC-CH-HHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHH
Q 019448 229 VQGWETD-DV-EEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQL 306 (341)
Q Consensus 229 ~~~~~~~-d~-~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l 306 (341)
....+.+ +. .++++++ ++ +|+..| .+.++++++..+ +... .....+++|+||++.|.+.+.+
T Consensus 182 ~~~~~~~~~~a~~aA~~l---------g~--~VvlKG-~~~vi~~~~~~~-~~~~---g~~~~~t~GtGD~Lag~Iaa~l 245 (310)
T 2r3b_A 182 LPIEQQTLANNQRQQAKL---------GS--TIVLKS-HRTTIFHAGEPF-QNTG---GNPGMATGGTGDTLAGIIAGFL 245 (310)
T ss_dssp CCGGGCCHHHHHHHHHHH---------TS--EEEECS-TTCEEECSSSCE-ECCC---CCGGGCSTTHHHHHHHHHHHHH
T ss_pred CCCCcccchHHHHHHHHh---------Cc--EEEEeC-CceEEEECCEEE-EECC---CCCCCCCCChHHHHHHHHHHHH
Confidence 5322222 33 5556654 32 455556 456666543343 3332 2366789999999744444444
Q ss_pred hcCCCHHHHHHHHHHHhhhhh
Q 019448 307 VQEKPIEECVRAGCYTSHVII 327 (341)
Q Consensus 307 ~~g~~~~~a~~~a~~~Aa~~v 327 (341)
.+|.++.+|+..|+.+.+..-
T Consensus 246 A~g~~~~eA~~~A~~~~~~ag 266 (310)
T 2r3b_A 246 AQFKPTIETIAGAVYLHSLIG 266 (310)
T ss_dssp HHSCSSHHHHHHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHHHHH
Confidence 699999999999987666643
|
| >3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=98.90 E-value=3.9e-08 Score=85.22 Aligned_cols=161 Identities=14% Similarity=0.087 Sum_probs=104.4
Q ss_pred hhhhhccceEEEEecccccc-CHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhc-CCCcEEecCHHHHHHHhh
Q 019448 151 NWALVEKAKYFYIAGFFLTV-SPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVL-PYMDYIFGNETEARTFSK 228 (341)
Q Consensus 151 ~~~~l~~~~~v~i~~~~~~~-~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l-~~~dvl~~n~~E~~~l~~ 228 (341)
..+.++.++.+++..-.+.. ..+.+...++.+++.++|+++||-.........+..++++ .+.++|.+|..|+..|++
T Consensus 52 ~~e~~~~a~alvIn~G~l~~~~~~~~~~a~~~a~~~~~PvVlDPVg~gas~~r~~~~~~Ll~~~~~VItpN~~E~~~L~g 131 (273)
T 3dzv_A 52 FPQMFQQTSALVLNLGHLSQEREQSLLAASDYARQVNKLTVVDLVGYGASDIRNEVGEKLVHNQPTVVKGNLSEMRTFCQ 131 (273)
T ss_dssp HHHHHTTCSEEEEECCSCCHHHHHHHHHHHHHHHHTTCCEEEECTTTTSCHHHHHHHHHHHHTCCSEEEEEHHHHHHHTT
T ss_pred HHHHHHHCCeEEEecCCCChHHHHHHHHHHHHHHHcCCcEEEchhhcCCcccCHHHHHHHHhcCCcEECCCHHHHHHHhC
Confidence 34567889999997533211 1245667777788899999999954322211122223333 368999999999999998
Q ss_pred hcC----CCC-------C---CHHHHHHHHhcCCccccCCc-cEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCC
Q 019448 229 VQG----WET-------D---DVEEIALKLSQWPKASEIRK-RTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNG 293 (341)
Q Consensus 229 ~~~----~~~-------~---d~~~~~~~l~~~~~~~~~~~-~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tG 293 (341)
... .+. + +..++++.+. +... ..|++| |..- ++++++..+.++.- +....+++|
T Consensus 132 ~~~~~~GVds~~~~~~~~~~~d~~~aa~~la------~~~~~~~Vvlk-G~~D-~i~dg~~~~~~~~G---~~~~~~v~G 200 (273)
T 3dzv_A 132 LVSHGRGVDGSPLDQSEEAIEELIQALRQQT------QKFPQTVFLAT-GIQD-VLVSQEQVIVLQNG---VPELDCFTG 200 (273)
T ss_dssp CCCC-------CGGGSHHHHHHHHHHHHHHH------HHSTTCEEEEE-SSSE-EEECSSCEEEECCC---CGGGGSSTT
T ss_pred CcccccccccccccchhhhhHHHHHHHHHHH------HHhCCeEEEEE-CCee-EEEcCCEEEEeCCC---CcccCCcCC
Confidence 542 121 1 3345666663 2223 566777 4432 45555566665432 124456799
Q ss_pred CchhhHHHHHHHHhcCCCHHHHHHHHHHH
Q 019448 294 AGDAFVGGFLSQLVQEKPIEECVRAGCYT 322 (341)
Q Consensus 294 AGDaf~ag~~~~l~~g~~~~~a~~~a~~~ 322 (341)
.||++.|.+.+.+.+|.++.+|+..|...
T Consensus 201 tGc~Ls~~Iaa~lA~g~~~~~Aa~~A~~~ 229 (273)
T 3dzv_A 201 TGDLVGALVAALLGEGNAPMTAAVAAVSY 229 (273)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 99999999999999999999998888754
|
| >3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A | Back alignment and structure |
|---|
Probab=98.90 E-value=5.8e-07 Score=83.05 Aligned_cols=214 Identities=11% Similarity=0.016 Sum_probs=123.5
Q ss_pred eEEEEcCceeeeEeecChhHHHHh----C-------------------------------CCCCceEecccccccHHHHH
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKY----D-------------------------------IKLNNAILAEEKHLPLYDEM 50 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~----~-------------------------------~~~~~~~~~~~~~~~~~~~~ 50 (341)
.|++-=++++|.+.+++++.++++ + +..++.++.+. .+...-..
T Consensus 29 ~i~~ayN~NVDai~~~~~~~i~~li~~~~~~~v~~~~~~~p~~I~s~~dl~~~~~~~~~~G~aaE~~v~~~-~~~~~~~~ 107 (474)
T 3drw_A 29 SIYTAYNANIAAIVKLNQETIQNLINAFDPDEVKRRIEEYPREINEPIDFVARLVHTLKLGKPAAVPLVNE-KMNEWFDK 107 (474)
T ss_dssp EEEEESCCEEEEEEECCHHHHHHHHHTSCHHHHHHHHHHCCSSBSSHHHHHHHHHHHHHHTCCEEEEECCT-THHHHHHH
T ss_pred ceEEEecccEEEEEEcCHHHHHHHHHhcChHHhhhhhhcCCccCCCHHHHHHHHHHHHhCCCceEEecccH-hHHHHHHH
Confidence 688888999999999998655533 1 22345556554 22211111
Q ss_pred hccCCceEecCchHHHHHHHHHHHhcCCC-cEEEEeeeecCchhHHHHHHHHhcCcceeee--------e----cC-CCC
Q 019448 51 ASKYNVEYIAGGATQNSIRVAQWMLQIPG-ATSYIGCIGKDKFGEEMKKNSKLAGVNVHYY--------E----DE-SAS 116 (341)
Q Consensus 51 ~~~~~~~~~~GG~a~n~a~~l~~l~~lg~-~v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~--------~----~~-~~~ 116 (341)
.......+.||.|.-+|..++. +|. +|.+.++... +...+.| ..+|-.... . .. +.+
T Consensus 108 -~~~~~~~~~GGnA~imAn~La~---lg~~~Vi~~~p~~s----k~~~~ll-~~~i~~p~~e~g~l~l~~~~ea~~~~~~ 178 (474)
T 3drw_A 108 -TFRYEEERLGGQAGIIANTLAG---LKIRKVIAYTPFLP----KRLAELF-KKGVLYPVVENGELQFKPIQEAYREGDP 178 (474)
T ss_dssp -HCCCSEEEEESHHHHHHHHHHH---TTCSEEEECCSCCC----HHHHTTS-CTTEEEEEESSSSEEEEEGGGCCCTTCC
T ss_pred -hcccceEecCChHHHHHHHHHH---cCCCcEEEecCcCC----HHHHHhc-CCcceeecccCCceeecCchhhhccCCC
Confidence 1233467899999999999887 458 5777777543 3445555 233322211 0 00 111
Q ss_pred ceeEEEEE-eCCc---------------cceeecccccc-cCC-cccCCCcchhhhh-ccceEEEEeccccccC------
Q 019448 117 TGTCAVCV-VGGE---------------RSLVANLSAAN-CYK-SEHLKKPENWALV-EKAKYFYIAGFFLTVS------ 171 (341)
Q Consensus 117 t~~~~~~~-~~g~---------------~~~~~~~~~~~-~~~-~~~~~~~~~~~~l-~~~~~v~i~~~~~~~~------ 171 (341)
...-+++- ..|+ |-++.....+. .+. .+.+. +....+ +.+|+++++|++....
T Consensus 179 ~~iH~I~Ey~~G~~~~~~~~~~~aPraNRfI~s~D~~N~~~l~~~e~f~--~~l~e~~~~~d~~vLSGlq~m~~~y~dg~ 256 (474)
T 3drw_A 179 LKINRIFEFRKGLKFKLGDETIEIPNSGRFIVSARFESISRIETREDIK--PFLGEIGKEVDGAIFSGYQGLRTKYSDGK 256 (474)
T ss_dssp CCEEEEEEECTTCEEESSSCEEECCSCEEEEEEECCSGGGCCSCCTTTG--GGHHHHHHHCSEEEECCGGGCCSBCTTSC
T ss_pred CCcEEEEEcCCCCeeecCCceEEccCCCeEEEEcCCCCHHhccccHHHH--HHHHHhhcCCCEEEEeccccccccccccc
Confidence 22222222 2333 22333322222 222 22222 122333 3699999999985332
Q ss_pred --HH---HHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcC
Q 019448 172 --PD---SIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQG 231 (341)
Q Consensus 172 --~~---~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~ 231 (341)
.+ .+.+.++..+..++++-+...+..-.+.....+..+++++|.+-+|++|+..+.+..+
T Consensus 257 ~~~~~l~~~~e~i~~l~~~~~~iH~E~As~~~~~l~~~i~~~i~p~vDSlGmNEqELa~l~~~lg 321 (474)
T 3drw_A 257 DANYYLRRAKEDIIEFKEKDVKIHVEFASVQDRKLRKKIITNILPFVDSVGIDEAEIAQILSVLG 321 (474)
T ss_dssp BHHHHHHHHHHHHHHHHHTTCEEEEECCCCSCHHHHHHHHHHTGGGSSEEEEEHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHhcCCCCeEEEEeCccccHHHHHHHHHHhcccccccccCHHHHHHHHHHhc
Confidence 12 2335555556788999999987654444555567899999999999999999987643
|
| >3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=3.6e-08 Score=92.92 Aligned_cols=157 Identities=15% Similarity=0.097 Sum_probs=100.5
Q ss_pred hhhccceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCC
Q 019448 153 ALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGW 232 (341)
Q Consensus 153 ~~l~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~ 232 (341)
+.+..+|+++++.- +..+......+.+.+++.++++++|+....... .+.+ +..+..+++.||..|+..|++....
T Consensus 316 ~~~~~~davviGpG-lg~~~~~~~~~~~~l~~~~~pvVlDadgl~~l~--~~ll-~~~~~~~vlTPN~~E~~~L~g~~~~ 391 (502)
T 3rss_A 316 ELSKDVDVVAIGPG-LGNNEHVREFVNEFLKTLEKPAVIDADAINVLD--TSVL-KERKSPAVLTPHPGEMARLVKKTVG 391 (502)
T ss_dssp HHHTTCSEEEECTT-CCCSHHHHHHHHHHHHHCCSCEEECHHHHHTCC--HHHH-HHCSSCEEECCCHHHHHHHHTCCHH
T ss_pred HHhccCCEEEEeCC-CCCCHHHHHHHHHHHHhcCCCEEEeCcccchhc--HHHH-hccCCCEEEeCCHHHHHHHhCCCcc
Confidence 45678999999752 222233333333355677899999996533211 2222 2345678999999999999874321
Q ss_pred C-CCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCC
Q 019448 233 E-TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKP 311 (341)
Q Consensus 233 ~-~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~ 311 (341)
+ .++ .++++++.+ .. ..+|+..|. +.++++++..+..+ . .....+++|+||+++|.+.+.+.+|.+
T Consensus 392 ~~~~d-~~aa~~la~------~~-~~~VvlKG~-~~vi~~~~~~~~~~-~---g~~~~at~GsGD~Lag~iaa~lA~g~~ 458 (502)
T 3rss_A 392 DVKYN-YELAEEFAK------EN-DCVLVLKSA-TTIVTDGEKTLFNI-T---GNTGLSKGGSGDVLTGMIAGFIAQGLS 458 (502)
T ss_dssp HHTTC-HHHHHHHHH------HH-TSEEEECSS-SEEEECSSCEEEEC-C---CCGGGSSTTHHHHHHHHHHHHHHTTCC
T ss_pred chHHH-HHHHHHHHH------Hc-CCEEEEeCC-CeEEEcCCEEEEEC-C---CCCccccCCchHHHHHHHHHHHhCCCC
Confidence 1 244 667777632 22 235566565 45566555444333 2 235678999999988888888889999
Q ss_pred HHHHHHHHHHHhhhh
Q 019448 312 IEECVRAGCYTSHVI 326 (341)
Q Consensus 312 ~~~a~~~a~~~Aa~~ 326 (341)
+.+|+.+|+..-+.+
T Consensus 459 ~~~Aa~~A~~~hg~A 473 (502)
T 3rss_A 459 PLEASTVSVYLHGFA 473 (502)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999998766554
|
| >3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A | Back alignment and structure |
|---|
Probab=98.68 E-value=8.5e-08 Score=83.56 Aligned_cols=155 Identities=15% Similarity=0.141 Sum_probs=99.2
Q ss_pred hccceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhc---CCCcEEecCHHHHHHHhhhcC
Q 019448 155 VEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVL---PYMDYIFGNETEARTFSKVQG 231 (341)
Q Consensus 155 l~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l---~~~dvl~~n~~E~~~l~~~~~ 231 (341)
++.+|++++.+ .+.. .+...++++.+.+.+.++++|...... +.+ ...++|.||..|+..|++...
T Consensus 96 l~~~davviGP-Glg~-~~~~~~~~~~~l~~~~p~VlDAdal~~---------~~l~~~~~~~vlTPN~~E~~~L~g~~~ 164 (279)
T 3rpz_A 96 EETYRAIAIGP-GLPQ-TESVQQAVDHVLTADCPVILDAGALAK---------RTYPKREGPVILTPHPGEFFRMTGVPV 164 (279)
T ss_dssp SSCCSEEEECT-TCCC-CHHHHHHHHHHTTSSSCEEECGGGCCS---------CCCCCCSSCEEECCCHHHHHHHHCCCH
T ss_pred ccCCCEEEECC-CCCC-CHHHHHHHHHHHhhCCCEEEECCccch---------hhhhhccCCEEEecCHHHHHHHhCCCc
Confidence 56789999964 2222 234566677777778899999976431 222 346899999999999987432
Q ss_pred CC-CCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCC
Q 019448 232 WE-TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK 310 (341)
Q Consensus 232 ~~-~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~ 310 (341)
.+ .++..++++++.+ ..+ . +|+-.|. +.+++++++.+++... ......++|+||++.+.+.+.+.+|.
T Consensus 165 ~~~~~d~~~aa~~la~-----~~~-~-~VvlKG~-~~vi~~~~g~~~~~~~---g~~~~at~GtGD~Lag~iaa~lA~g~ 233 (279)
T 3rpz_A 165 NELQKKRAEYAKEWAA-----QLQ-T-VIVLKGN-QTVIAFPDGDCWLNPT---GNGALAKGGTGDTLTGMILGMLCCHE 233 (279)
T ss_dssp HHHTTSHHHHHHHHHH-----HHT-S-EEEECST-TCEEECTTSCEEECCC---CCGGGCSTTHHHHHHHHHHHHHHHCS
T ss_pred cchHHHHHHHHHHHHH-----HcC-e-EEEEeCC-CcEEECCCceEEEeCC---CCCCCCCCChHHHHHHHHHHHHHCCC
Confidence 11 2466677777732 122 2 4454465 4455655544444332 22567899999987666666667999
Q ss_pred CHHHHHHHHHH----Hhhhhhhhcc
Q 019448 311 PIEECVRAGCY----TSHVIIQRSG 331 (341)
Q Consensus 311 ~~~~a~~~a~~----~Aa~~v~~~g 331 (341)
++.+|+..|.. ++-...++.|
T Consensus 234 ~~~~A~~~a~~lh~~Ag~~a~~~~g 258 (279)
T 3rpz_A 234 DPKHAVLNAVYLHGACAELWTDEHS 258 (279)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999874 3444444444
|
| >1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3 | Back alignment and structure |
|---|
Probab=98.41 E-value=2.3e-05 Score=72.48 Aligned_cols=209 Identities=11% Similarity=-0.029 Sum_probs=116.0
Q ss_pred ceEEEEcCceeeeEeecChhHHH----HhCCC-------------------------------CCceEecccccccHHHH
Q 019448 5 GILLGMGNPLLDISSVVDDDFLN----KYDIK-------------------------------LNNAILAEEKHLPLYDE 49 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~----~~~~~-------------------------------~~~~~~~~~~~~~~~~~ 49 (341)
.+|++-=++++|.+...+++.++ +++.. .++.++.+.+-+.....
T Consensus 31 ~~i~~Gyn~nvD~iv~~~~~~i~~Ll~~~~~~~~~~~~~~~~~~I~s~~dl~~~~~~~~~~G~aaE~~v~~~~~f~~l~~ 110 (467)
T 1gc5_A 31 KGVLLAYNTNIDAIKYLDADDLEKRVTEKGKEKVFEIIENPPEKISSIEELLGGILRSIKLGKAMEWFVESEEVRRYLRE 110 (467)
T ss_dssp CCEEEESCCEEEEEEECCHHHHHHHHHHHCHHHHHHHHHSCCSSBCSHHHHHHHHHHHHHSCCCEEEEBCCHHHHHHHHH
T ss_pred CcEEEEecccEEEEEeCchHHHHHHHHHcCCcccccccccCccccCCHHHHHHHHHHHHhCCCceEEeccCHHHHHHHHH
Confidence 37777788999999999874433 33332 23344444322222222
Q ss_pred HhccCCceEecCchHHHHHHHHHHHhcCCCcEEE--EeeeecCchhHHHHHHHHhcCcceeeeec------------CCC
Q 019448 50 MASKYNVEYIAGGATQNSIRVAQWMLQIPGATSY--IGCIGKDKFGEEMKKNSKLAGVNVHYYED------------ESA 115 (341)
Q Consensus 50 ~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~--i~~vG~D~~g~~i~~~l~~~gi~~~~~~~------------~~~ 115 (341)
..-...+.||.|.-+|..++. +|.++.+ ++.+| +...+.|.+.+|....+.. .+.
T Consensus 111 ---~~~~~~~mGGnAgimAn~la~---lg~~~vl~~~~~~s-----~~~~~l~~~~~i~~p~~~~g~l~~~~~~ea~~~~ 179 (467)
T 1gc5_A 111 ---WGWDELRIGGQAGIMANLLGG---VYRIPTIVHVPQNP-----KLQAELFVDGPIYVPVFEGNKLKLVHPKDAIAEE 179 (467)
T ss_dssp ---HCCSEEEEESHHHHHHHHHHH---TSCCCEEECCSCCC-----HHHHTTSCSSSEEEEEECSSCEEEECGGGSCCSC
T ss_pred ---hcCcccccCccHHHHHHHHHh---cCCCEEEEcCCCCC-----HHHHHhcCCCCeeeeeccCCceecccchhhccCC
Confidence 111223999999999988886 4578776 55544 4556666534443321110 012
Q ss_pred CceeEEEEE-eCCccc-----------eeecccccccCCcccCCCcchhhhh----ccceEEEEeccccccC-------H
Q 019448 116 STGTCAVCV-VGGERS-----------LVANLSAANCYKSEHLKKPENWALV----EKAKYFYIAGFFLTVS-------P 172 (341)
Q Consensus 116 ~t~~~~~~~-~~g~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~v~i~~~~~~~~-------~ 172 (341)
+...-+++- ..|++. ++..+..+..+. -.+++...+ ..+|+++++|++.... .
T Consensus 180 ~~~iH~I~Ey~~G~~~~~~~aPraNRfI~s~D~~N~~l~----~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~y~~g~~~ 255 (467)
T 1gc5_A 180 EELIHYIYEFPRGFQVFDVQAPRENRFIANADDYNARVY----MRREFREGFEEITRNVELAIISGLQVLKEYYPDGTTY 255 (467)
T ss_dssp CCCEEEEEEECSSCEETTEECSSCEEEEEECCSSTTTTC----CCHHHHHSHHHHHTTCSEEEECCGGGCCSBCTTSCBH
T ss_pred CCcceEEEEcCCCCeecceeccCCceEEEecCCCCcccc----ccHHHHHHHHhhccCCCEEEEechhcccCccCCchhH
Confidence 222222222 244432 222211111111 012222334 4599999999984322 1
Q ss_pred -HHHH---HHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhh
Q 019448 173 -DSIQ---LVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKV 229 (341)
Q Consensus 173 -~~~~---~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~ 229 (341)
+.+. +.++.....++++.+.+.+..-.......+ .+++++|.+-+|++|+..+...
T Consensus 256 ~~~l~~~~~~l~~l~~~~~~iH~E~As~~~~~l~~~i~-~ilp~vDSlGmNEqELa~l~~~ 315 (467)
T 1gc5_A 256 KDVLDRVESHLNILNRYNVKSHFEFAYTANRRVREALV-ELLPKFTSVGLNEVELASIMEI 315 (467)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEECCCCCCHHHHHHHH-HHGGGCSEEEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCCeEEEEECCcccHHHHHHHH-hhccccccCccCHHHHHHHHHH
Confidence 2222 233332567889999998765444455656 8999999999999999866544
|
| >1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3 | Back alignment and structure |
|---|
Probab=98.41 E-value=8.7e-06 Score=75.17 Aligned_cols=209 Identities=11% Similarity=-0.044 Sum_probs=113.7
Q ss_pred ceEEEEcCceeeeEeecChhHHH----HhCCC-------------------------------CCceEecccccccHHHH
Q 019448 5 GILLGMGNPLLDISSVVDDDFLN----KYDIK-------------------------------LNNAILAEEKHLPLYDE 49 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~----~~~~~-------------------------------~~~~~~~~~~~~~~~~~ 49 (341)
.+|++==++++|.+...+++.++ +++.. .++.++.+.+-+.....
T Consensus 26 ~~i~~gyn~nvD~iv~~~~~~i~~Ll~~~~~~~~~~~~~~~~~~I~s~~dl~~~~~~~~~~G~aaE~~v~~~~~f~~l~~ 105 (457)
T 1l2l_A 26 RGVLLAYNTNIDAIKYLKREDLEKRIEKVGKEEVLRYSEELPKEIETIPQLLGSILWSIKRGKAAELLVVSREVREYMRK 105 (457)
T ss_dssp CCEEEEECCEEEEECBCCHHHHHHHHHHHCHHHHHHHHHSCCSSBCSHHHHHHHHHHHHHHTCCEEEEBCCHHHHHHHHH
T ss_pred CcEEEEecccEEEEEECchHHHHHHHHHhCCcccccccccCCcccCCHHHHHHHHHHHHhCCCceEEeccCHHHHHHHHH
Confidence 36777778999999999874433 44332 13334443322212222
Q ss_pred HhccCCceEecCchHHHHHHHHHHHhcCCCcEEE--EeeeecCchhHHHHHHHHhcCcceeeeec------------CCC
Q 019448 50 MASKYNVEYIAGGATQNSIRVAQWMLQIPGATSY--IGCIGKDKFGEEMKKNSKLAGVNVHYYED------------ESA 115 (341)
Q Consensus 50 ~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~--i~~vG~D~~g~~i~~~l~~~gi~~~~~~~------------~~~ 115 (341)
. .-...+.||.|.-+|..++. +|.++.+ ++.+| +..++.|.+.+|....+.. .+.
T Consensus 106 -~--~~~~~~mGGnA~imAn~la~---lg~~~vl~~~~~~s-----~~~~~l~~~~~i~~p~~~~g~l~l~~~~e~~~~~ 174 (457)
T 1l2l_A 106 -W--GWDELRMGGQVGIMANLLGG---VYGIPVIAHVPQLS-----ELQASLFLDGPIYVPTFERGELRLIHPREFRKGE 174 (457)
T ss_dssp -H--CCSEEEEESHHHHHHHHHTT---TSCCCEEECCSSCC-----HHHHHTSCSSSEEEEC------CEECGGGC----
T ss_pred -h--cCCccccCchHHHHHHHHHH---cCCCEEEEcCCCCC-----HHHHHhcCCCCeEeeeccCCceeccCchhhccCC
Confidence 1 11233999998888888775 5688776 55544 4556666533343221100 001
Q ss_pred CceeEEEEE-eCCcc-----------ceeecccccccCCcccCCCcchhhhh----ccceEEEEeccccccC---HH---
Q 019448 116 STGTCAVCV-VGGER-----------SLVANLSAANCYKSEHLKKPENWALV----EKAKYFYIAGFFLTVS---PD--- 173 (341)
Q Consensus 116 ~t~~~~~~~-~~g~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~v~i~~~~~~~~---~~--- 173 (341)
+...-+++- ..|++ -++..+..+..+.. .+++...+ ..+|+++++|++.... +.
T Consensus 175 ~~~iH~I~Ey~~G~~~~~~~aPraNRfI~s~D~~N~~l~~----~e~f~~~l~e~~~~~d~~vlSG~q~l~~~~~~~~~~ 250 (457)
T 1l2l_A 175 EDCIHYIYEFPRNFKVLDFEAPRENRFIGAADDYNPILYV----REEWIERFEEIAKRSELAIISGLHPLTQENHGKPIK 250 (457)
T ss_dssp CCCEEECCEECTTCEETTEECSSCEEEEEEECSSGGGTCC----CHHHHHSHHHHHTTCSEEEEECCTTCCTTTCHHHHH
T ss_pred CCcceEEEEcCCCCeecceecCCCCeEEEEcCCCCCCCcc----cHHHHHHHHhhccCCCEEEEeccccccccchhhhHH
Confidence 111221221 23433 22222221122211 12222334 4599999999985333 22
Q ss_pred HHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhh
Q 019448 174 SIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKV 229 (341)
Q Consensus 174 ~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~ 229 (341)
.....++.....++++-+...+..-.+.....+ .+++++|.+-+|++|+..+...
T Consensus 251 ~~~~~i~~L~~~~~~iH~E~As~~~~~l~~~i~-~ilp~vDSlGmNEqELa~l~~~ 305 (457)
T 1l2l_A 251 LVREHLKILNDLGIRAHLEFAFTPDEVVRLEIV-KLLKHFYSVGLNEVELASVVSV 305 (457)
T ss_dssp HHHHHHHHHHHTTCEEEEECCCCSSHHHHHHHH-HHGGGCSEEEECHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCeEEEEECCcccHHHHHHHH-hhccccccCccCHHHHHHHHHH
Confidence 122333333678899999998765444455556 8999999999999999886443
|
| >1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3 | Back alignment and structure |
|---|
Probab=98.40 E-value=2.3e-05 Score=72.51 Aligned_cols=163 Identities=10% Similarity=0.042 Sum_probs=92.4
Q ss_pred EecCchHHHHHHHHHHHhcCCCcEEE--EeeeecCchhHHHHHHHHhcCcceeeee------------cCCCCceeEEEE
Q 019448 58 YIAGGATQNSIRVAQWMLQIPGATSY--IGCIGKDKFGEEMKKNSKLAGVNVHYYE------------DESASTGTCAVC 123 (341)
Q Consensus 58 ~~~GG~a~n~a~~l~~l~~lg~~v~~--i~~vG~D~~g~~i~~~l~~~gi~~~~~~------------~~~~~t~~~~~~ 123 (341)
.+.||.|..+|..++. +|.++.+ ++.+|. ...+.|.+.+|...... ....+....+++
T Consensus 108 ~~~GGnA~imAn~la~---lg~~~vl~~~~~l~~-----~~~~lf~~~~i~~p~~~~~~~~l~~~~e~~~~~~~~iH~I~ 179 (455)
T 1ua4_A 108 LRMGGQAGIMANLLGG---VYGVPVIVHVPQLSR-----LQANLFLDGPIYVPTLENGEVKLIHPKEFSGDEENCIHYIY 179 (455)
T ss_dssp EEEESHHHHHHHHHTT---TTCCCEEECCSCCCH-----HHHTTSCSSSEEEEEEETTEEEEECGGGCSCCCCCCEEEEE
T ss_pred cccCCcHHHHHHHHHH---cCCCEEEEeCCCCCH-----HHHHhcCCCCeEeecccCCccccccchhhccCCCCCceEEE
Confidence 3999999998888775 5688877 676654 35555553334331110 012233333333
Q ss_pred E-eCCccc-----------eeecccccccCC-cccCCCcchhhhhccceEEEEeccccccC---HHHHHHHHH---HHHh
Q 019448 124 V-VGGERS-----------LVANLSAANCYK-SEHLKKPENWALVEKAKYFYIAGFFLTVS---PDSIQLVAE---HAAA 184 (341)
Q Consensus 124 ~-~~g~~~-----------~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~v~i~~~~~~~~---~~~~~~~~~---~a~~ 184 (341)
- ..|++. ++.....+..+. .+.+.. ...+....+|+++++|++.... .+.....++ ....
T Consensus 180 Ef~~G~~~~~~~aPraNRfI~s~D~~n~~l~~~e~f~~-~l~e~~~~~dl~vlSG~q~l~~~~~~~~~~~~l~~i~~L~~ 258 (455)
T 1ua4_A 180 EFPRGFRVFEFEAPRENRFIGSADDYNTTLFIREEFRE-SFSEVIKNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNE 258 (455)
T ss_dssp EECTTCEETTEECSSCEEEEEECCSSGGGTCCCGGGST-THHHHGGGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHH
T ss_pred EcCCCCeecceeccccceeEEecCCCcccCcccHHHHH-HHHhhccCCcEEEEechhcccccchHHHHHHHHHHHHHhcC
Confidence 3 255532 222222112221 122211 1112234499999999984222 122222222 3366
Q ss_pred CCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhc
Q 019448 185 NNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQ 230 (341)
Q Consensus 185 ~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~ 230 (341)
.+.++.+++.+..-.......+ .+++++|.+-+|++|+..+....
T Consensus 259 ~~~~iH~ElAs~~~~~~~~~i~-~ilp~vDSlGmNE~EL~~l~~~l 303 (455)
T 1ua4_A 259 REIPVHLEFAFTPDEKVREEIL-NVLGMFYSVGLNEVELASIMEIL 303 (455)
T ss_dssp TTCCEEEECCCCCCHHHHHHHH-HHGGGCSEEEECHHHHHHHHHHT
T ss_pred CCceEEEEeCCccCHHHHHHHH-hhhccCcccccCHHHHHHHHHHh
Confidence 7789999998765444445556 89999999999999999887653
|
| >3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A* | Back alignment and structure |
|---|
Probab=98.30 E-value=2.3e-05 Score=74.46 Aligned_cols=159 Identities=13% Similarity=0.055 Sum_probs=102.0
Q ss_pred hhhhcc-ceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC--CCcEEecCHHHHHHHhh
Q 019448 152 WALVEK-AKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP--YMDYIFGNETEARTFSK 228 (341)
Q Consensus 152 ~~~l~~-~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~E~~~l~~ 228 (341)
.+..+. ++.++|..-.+.. .+.+..+.+.+++.++|+++||-.-.......+..+++++ +.++|.+|..|+..|++
T Consensus 300 ~e~~~~~~~alvin~G~l~~-~~~~~~a~~~a~~~~~PvVlDPVg~~a~~~r~~~~~~Ll~~~~~~vItpN~~E~~~L~g 378 (540)
T 3nl6_A 300 NDLAAIPHATLLLNTGSVAP-PEMLKAAIRAYNDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGLAE 378 (540)
T ss_dssp HHHTTSTTCEEEEESSCSCC-HHHHHHHHHHHHTTTCCEEEECTTCTTSHHHHHHHHHHTTSCCCSEEEECHHHHHHHTT
T ss_pred HHHHhccCCeEEEeCCCCCH-HHHHHHHHHHHHHcCCCEEEChHHhhcccccHHHHHHHHhhCCCeEECCCHHHHHHHhC
Confidence 345566 8999997644333 7788888888999999999999653322222344567777 78999999999999987
Q ss_pred hcC-----CC------CCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEEC-------------------CeeEEE
Q 019448 229 VQG-----WE------TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQD-------------------GKLKKF 278 (341)
Q Consensus 229 ~~~-----~~------~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~-------------------~~~~~~ 278 (341)
... .+ .++..++++.+.+ +.-..|++| |+.- +++++ +..+.+
T Consensus 379 ~~~~~~~GVds~~~~~~~d~~~aA~~lA~------~~~~vVvlk-G~~D-~I~dg~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (540)
T 3nl6_A 379 LNKERMKGVDASSGISNELLIQATKIVAF------KYKTVAVCT-GEFD-FIADGTIEGKYSLSKGTNGTSVEDIPCVAV 450 (540)
T ss_dssp C--------------CCHHHHHHHHHHHH------HTTSEEEEC-SSSE-EEEECCGGGBCCSSSCCSSCCTTSSCEEEE
T ss_pred CCcccccccccccccCHHHHHHHHHHHHH------HhCCEEEEc-CCCe-EEECCCccccccccccccccccCCccEEEE
Confidence 431 12 1344566666632 222445555 5533 34444 344544
Q ss_pred eceecCCCcccCCCCCchhhHHHHHHHHhcCC---CHHHHHHHHHH
Q 019448 279 PVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK---PIEECVRAGCY 321 (341)
Q Consensus 279 ~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~---~~~~a~~~a~~ 321 (341)
+.-.+ .-.-.++|.||++.+.+.+.+..+. ++.+|+..|..
T Consensus 451 ~~G~~--~~m~~vtGtGc~Lsg~Iaa~la~~~~~~~~~~Aa~~a~~ 494 (540)
T 3nl6_A 451 EAGPI--EIMGDITASGCSLGSTIACMIGGQPSEGNLFHAVVAGVM 494 (540)
T ss_dssp ECSCC--GGGGSSTTHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHH
T ss_pred CCCCh--hhccCccCchHHHHHHHHHHHhcCcCCCCHHHHHHHHHH
Confidence 42110 1223479999999998888888887 57777776654
|
| >3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.16 E-value=3.2e-05 Score=66.40 Aligned_cols=158 Identities=15% Similarity=0.071 Sum_probs=90.7
Q ss_pred hhhhccceEEEEecccccc-CHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhc-CCCcEEecCHHHHHHHhhh
Q 019448 152 WALVEKAKYFYIAGFFLTV-SPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVL-PYMDYIFGNETEARTFSKV 229 (341)
Q Consensus 152 ~~~l~~~~~v~i~~~~~~~-~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l-~~~dvl~~n~~E~~~l~~~ 229 (341)
.+....++.++++--.+.. ..+.+....+.+.+.++|+++||-.-.....-.+..++++ .+.++|.+|..|...|++.
T Consensus 51 ~e~~~~a~al~iNiGtl~~~~~~~m~~A~~~A~~~~~PvVLDPVg~gas~~R~~~~~~ll~~~~~vIrgN~sEi~~L~g~ 130 (265)
T 3hpd_A 51 EEMIRLADAVVINIGTLDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISALLGE 130 (265)
T ss_dssp HHHHHHCSEEEEECTTCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHHHHH
T ss_pred HHHHHHCCeEEEECCCCChHHHHHHHHHHHHHHHcCCCEEEcCCCCCCcHHHHHHHHHHHhcCCcEEcCCHHHHHHHhcc
Confidence 3556678888887533211 1245666677888999999999954321111112223332 3689999999999999875
Q ss_pred cCC----C-----CCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHH
Q 019448 230 QGW----E-----TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 300 (341)
Q Consensus 230 ~~~----~-----~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~a 300 (341)
... + .++..++++.+.+ +.+ ..|++| |+. -++.++++.+.++.= +..--..+|.||+..+
T Consensus 131 ~~~~~gvds~~~~~~d~~~~a~~lA~-----~~~-~vVvlk-G~~-d~I~dg~~~~~~~~G---~~~m~~vtGtGc~Lsg 199 (265)
T 3hpd_A 131 EGKTRGVDSLEYGEEEAKKLTMNAAR-----EFN-TTVAVT-GAV-DYVSDGRRTFAVYNG---HELLGRVTGTGCMVAA 199 (265)
T ss_dssp HC----------CHHHHHHHHHHHHH-----HTT-SEEEEE-SSS-EEEECSSCEEEECCC---CGGGGGSTTHHHHHHH
T ss_pred cCCCCCccCccccHHHHHHHHHHHHH-----HhC-CEEEEe-CCC-eEEEcCCEEEEECCC---ChHhhcCCccchHHHH
Confidence 422 1 1234566666642 222 345555 653 344555555554421 1122335899999766
Q ss_pred HHHHHHhcCCCHHHHHHHHHH
Q 019448 301 GFLSQLVQEKPIEECVRAGCY 321 (341)
Q Consensus 301 g~~~~l~~g~~~~~a~~~a~~ 321 (341)
.+.+.+..+ ++.+|...|..
T Consensus 200 ~iaa~lA~~-~~~~Aa~~a~~ 219 (265)
T 3hpd_A 200 LTGAFVAVT-EPLKATTSALV 219 (265)
T ss_dssp HHHHHHTTS-CHHHHHHHHHH
T ss_pred HHHHHHhcC-ChHHHHHHHHH
Confidence 555555555 55566655543
|
| >3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00077 Score=62.95 Aligned_cols=147 Identities=18% Similarity=0.183 Sum_probs=86.7
Q ss_pred ccceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcC----
Q 019448 156 EKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQG---- 231 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~---- 231 (341)
+++|.+++.+- +..+...+..++ .. . ++++|...-.. ..+.+.++...+|.||..|+.+|++..+
T Consensus 291 ~~~~a~~iGPG-lG~~~~~l~~~l---~~-~-p~VlDADaL~~-----~~~~~~~~~~~VlTPh~~E~~rL~g~~~~~v~ 359 (475)
T 3k5w_A 291 NLLSAFALGMG-LENIPKDFNRWL---EL-A-PCVLDAGVFYH-----KEILQALEKEAVLTPHPKEFLSLLNLVGINIS 359 (475)
T ss_dssp SSCSEEEECTT-CSSCCTTHHHHH---HH-S-CEEEEGGGGGS-----GGGGTTTTSSEEEECCHHHHHHHHHHTSCCCC
T ss_pred cCCCEEEEcCC-CCCCHHHHHHHH---hc-C-CEEEECcccCC-----chhhhccCCCEEECCCHHHHHHHhCCccCCCC
Confidence 57788888752 222221133333 23 4 88888864321 1122344556899999999999998621
Q ss_pred -CC-CCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcC
Q 019448 232 -WE-TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQE 309 (341)
Q Consensus 232 -~~-~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g 309 (341)
.+ .++..++++++.+ ..+...|++| |..- .+++++..+..+. -..-..+.|.||++.+.+.+.+.+|
T Consensus 360 ~~~~~~d~~~aa~~la~-----~~g~~~VvlK-G~~~-vI~~~~~~~~~~~----g~~~mat~GtGdvLsg~Iaa~lA~g 428 (475)
T 3k5w_A 360 MLELLDNKLEIARDFSQ-----KYPKVVLLLK-GANT-LIAHQGQVFINIL----GSVALAKAGSGDVLAGLILSLLSQN 428 (475)
T ss_dssp TTSGGGSCC--CHHHHH-----HCTTEEEEEC-SSSE-EEEETTEEEEECC----CCGGGCSTTHHHHHHHHHHHHHHTT
T ss_pred cchhHHHHHHHHHHHHH-----HcCCeEEEEe-CCCC-EEECCCEEEEECC----CCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 11 1244456666632 1112345554 5543 4445555444332 1244568999999999999999999
Q ss_pred CCHHHHHHHHHHHhh
Q 019448 310 KPIEECVRAGCYTSH 324 (341)
Q Consensus 310 ~~~~~a~~~a~~~Aa 324 (341)
.++.+|+..|...-+
T Consensus 429 ~~~~~Aa~~a~~lhg 443 (475)
T 3k5w_A 429 YTPLDAAINASLAHA 443 (475)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999887754433
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 341 | ||||
| d1bx4a_ | 342 | c.72.1.1 (A:) Adenosine kinase {Human (Homo sapien | 1e-70 | |
| d2absa1 | 350 | c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma g | 8e-56 | |
| d2afba1 | 333 | c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase | 1e-25 | |
| d1vk4a_ | 288 | c.72.1.1 (A:) Hypothetical protein TM0415 {Thermot | 4e-18 | |
| d1rkda_ | 306 | c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: | 3e-16 | |
| d2ajra1 | 319 | c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {T | 3e-16 | |
| d2f02a1 | 313 | c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase Lac | 2e-15 | |
| d2fv7a1 | 308 | c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapien | 2e-15 | |
| d1vm7a_ | 299 | c.72.1.1 (A:) Ribokinase {Thermotoga maritima [Tax | 3e-15 | |
| d1v19a_ | 302 | c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Ther | 2e-14 | |
| d2abqa1 | 306 | c.72.1.1 (A:1-306) Fructose 1-phosphate kinase Fru | 6e-14 | |
| d2dcna1 | 308 | c.72.1.1 (A:2-309) Hypothetical fructokinase ST247 | 5e-13 | |
| d1tyya_ | 304 | c.72.1.1 (A:) Aminoimidazole riboside kinase {Salm | 6e-12 | |
| d1vi9a_ | 288 | c.72.1.5 (A:) Pyridoxamine kinase {Escherichia col | 3e-08 | |
| d1lhpa_ | 309 | c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) | 2e-04 |
| >d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Adenosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 221 bits (563), Expect = 1e-70
Identities = 196/341 (57%), Positives = 261/341 (76%), Gaps = 2/341 (0%)
Query: 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGG 62
+E IL GMGNPLLDIS+VVD DFL+KY +K N+ ILAE+KH L+DE+ K+ VEY AGG
Sbjct: 2 RENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGG 61
Query: 63 ATQNSIRVAQWMLQIP-GATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCA 121
+TQNSI+VAQWM+Q P A ++ GCIG DKFGE +K+ + A V+ HYYE TGTCA
Sbjct: 62 STQNSIKVAQWMIQQPHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCA 121
Query: 122 VCVVGGERSLVANLSAANCYKS-EHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAE 180
C+ G RSL+ANL+AANCYK +HL +NW LVEKA+ YIAGFFLTVSP+S+ VA
Sbjct: 122 ACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKARVCYIAGFFLTVSPESVLKVAH 181
Query: 181 HAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 240
HA+ NN++F +NLSAPFI +F+K++L KV+PY+D +FGNETEA TF++ QG+ET D++EI
Sbjct: 182 HASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKEI 241
Query: 241 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 300
A K PK + R+R + TQG D ++A + ++ F V+ + +++DTNGAGDAFVG
Sbjct: 242 AKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVG 301
Query: 301 GFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
GFLSQLV +KP+ EC+RAG Y + +II+R+GCT+PEKP+F+
Sbjct: 302 GFLSQLVSDKPLTECIRAGHYAASIIIRRTGCTFPEKPDFH 342
|
| >d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Adenosine kinase species: Toxoplasma gondii [TaxId: 5811]
Score = 183 bits (464), Expect = 8e-56
Identities = 96/348 (27%), Positives = 169/348 (48%), Gaps = 22/348 (6%)
Query: 7 LLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQN 66
+ +GNP+LD+ + V FL+++ +K +A LA + + +Y + ++N + GG+ N
Sbjct: 6 VFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTL-DQFNPTSLPGGSALN 64
Query: 67 SIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVG 126
S+RV Q +L+ PG+ Y+G IG D G+ +K+ G+ + STG CAV +
Sbjct: 65 SVRVVQKLLRKPGSAGYMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINE 124
Query: 127 GERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANN 186
ER+L +L A ++ ++ A +++++ N
Sbjct: 125 KERTLCTHLGACGSFRLPEDWTTFASG---ALIFYATAYTLTATPKNALEVAGYAHGIPN 181
Query: 187 KVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQ 246
+F +NLSAPF E +KDA++ +L + + +FGNE E +KV + ++ +
Sbjct: 182 AIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKTALSTANKE 241
Query: 247 -------------WPKASEIRKRTAVITQGADPVVVAQDGK-----LKKFPVIVLPKDKL 288
+ + V+T+G +PV+ A+ + + V V+ +K+
Sbjct: 242 HAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKI 301
Query: 289 VDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPE 336
VDTNGAGDAFVGGFL L Q K +++C+ G + +IQ G +
Sbjct: 302 VDTNGAGDAFVGGFLYALSQGKTVKQCIMCGNACAQDVIQHVGFSLSF 349
|
| >d2afba1 c.72.1.1 (A:-2-330) 2-keto-3-deoxygluconate kinase {Thermotoga maritima, TM0067 [TaxId: 2336]} Length = 333 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: 2-keto-3-deoxygluconate kinase species: Thermotoga maritima, TM0067 [TaxId: 2336]
Score = 102 bits (255), Expect = 1e-25
Identities = 41/298 (13%), Positives = 101/298 (33%), Gaps = 25/298 (8%)
Query: 55 NVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDES 114
+ + GGA N VA ++ Q+ ++ + + G+ + + GV Y
Sbjct: 29 SFDVTYGGAEAN---VAAFLAQMGLDAYFVTKLPNNPLGDAAAGHLRKFGVKTDYIARGG 85
Query: 115 ASTGTCAVCVVGGER-SLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPD 173
G + + +R S V A + + + +++ A++F+ +G + +
Sbjct: 86 NRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFDWEKILDGARWFHFSGITPPLGKE 145
Query: 174 SIQLV------AEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFS 227
++ A + + + E + + + Y+D + NE +
Sbjct: 146 LPLILEDALKVANEKGVTVSCDLNYRARLWTKEEAQKVMIPFMEYVDVLIANEEDIEKVL 205
Query: 228 KVQGW---------ETDDVEEIALKLSQWPKASEI---RKRTAVITQGADPVVVAQDGKL 275
+ + +IA ++++ + + + T V+V ++G+
Sbjct: 206 GISVEGLDLKTGKLNREAYAKIAEEVTRKYNFKTVGITLRESISATVNYWSVMVFENGQP 265
Query: 276 KKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCT 333
+ +VD GAGD+F G + + ++ S + G
Sbjct: 266 HFSNR---YEIHIVDRVGAGDSFAGALIYGSLMGFDSQKKAEFAAAASCLKHTIPGDF 320
|
| >d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Hypothetical protein TM0415 species: Thermotoga maritima [TaxId: 2336]
Score = 81.2 bits (199), Expect = 4e-18
Identities = 41/282 (14%), Positives = 80/282 (28%), Gaps = 34/282 (12%)
Query: 55 NVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDES 114
E GG A + T I ++ + + GV V + +
Sbjct: 25 KREIAYGGGVVM---GAITSSLLGVKTKVITKCTREDVSK--FSFLRDNGVEVVFLKSPR 79
Query: 115 ASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLT-VSPD 173
++ R SAA+ + L + + +I + D
Sbjct: 80 TTSIENRYGSDPDTRESFLI-SAADPFTESDLA-------FIEGEAVHINPLWYGEFPED 131
Query: 174 SIQLVAEHA---AANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQ 230
I ++ +A+ + F+ + + EK L Y+D + EA T +
Sbjct: 132 LIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLKYLDLFKVDSREAETLTGTN 191
Query: 231 GWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVD 290
+ + ++ A V+V F L
Sbjct: 192 DLR------------ESCRIIRSFGAKIILATHASGVIVFDG----NFYEASFRSWSLEG 235
Query: 291 TNGAGDAFVGGFL-SQLVQEKPIEECVRAGCYTSHVIIQRSG 331
G GD FL + ++ IE+ + + V ++ G
Sbjct: 236 RTGRGDTCTAAFLVGFVFKKMSIEKATKFAAAVTSVKMRHPG 277
|
| >d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]} Length = 306 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Escherichia coli [TaxId: 562]
Score = 76.0 bits (185), Expect = 3e-16
Identities = 60/290 (20%), Positives = 112/290 (38%), Gaps = 21/290 (7%)
Query: 43 HLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKL 102
P E + + + GG N A + ++I C G D GE +++
Sbjct: 20 SFPTPGETVTGNHYQVAFGGKGAN---QAVAAGRSGANIAFIACTGDDSIGESVRQQLAT 76
Query: 103 AGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFY 162
+++ + A+ V GE N+ + + L A E+
Sbjct: 77 DNIDITPVSVIKGESTGVALIFVNGEGE---NVIGIHAGANAALSPALVEAQRERIANAS 133
Query: 163 IAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETE 222
L +S+ A+ A N + +N ++ +++L +D I NETE
Sbjct: 134 ALLMQLESPLESVMAAAKIAHQNKTIVALN------PAPARELPDELLALVDIITPNETE 187
Query: 223 ARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIV 282
A + ++ +D + E RT +IT G+ V + +G+ ++ P
Sbjct: 188 AEKLTGIRVENDEDAAKA------AQVLHEKGIRTVLITLGSRGVWASVNGEGQRVPGFR 241
Query: 283 LPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGC 332
+ + VDT AGD F G ++ L++EKP+ E +R + + + R G
Sbjct: 242 V---QAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTRKGA 288
|
| >d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Putative sugar kinase TM0828 species: Thermotoga maritima [TaxId: 2336]
Score = 75.8 bits (185), Expect = 3e-16
Identities = 37/334 (11%), Positives = 92/334 (27%), Gaps = 38/334 (11%)
Query: 12 NPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVA 71
NP LD ++D + + + GG N V+
Sbjct: 8 NPALDREIFIED-------------FQVNRLY-----RINDLSKTQMSPGGKGIN---VS 46
Query: 72 QWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNV-HYYEDESASTGTCAVCVV-GGER 129
+ ++ + G +G G+ + + + + + T + +
Sbjct: 47 IALSKLGVPSVATGFVGGY-MGKILVEELRKISKLITTNFVYVEGETRENIEIIDEKNKT 105
Query: 130 SLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVF 189
N + + + + + + + A +
Sbjct: 106 ITAINFPGPDVTDMDVNHFLRRYKMTLSKVDCVVISGSIPPGVNEGICNELVRLARERGV 165
Query: 190 MMNLSAPFICEFFKDALEKVLPYMDYIF-GNETEARTFSKVQGWETDDVEEIALKLSQWP 248
+ + + + + + + + +F V DD ++A KL++
Sbjct: 166 FVFVEQ---TPRLLERIYEGPEFPNVVKPDLRGNHASFLGVDLKTFDDYVKLAEKLAEKS 222
Query: 249 KASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLV- 307
+ S V++ +VA + + + GAGDA+V G + +
Sbjct: 223 QVS-------VVSYEVKNDIVATREG--VWLIRSKEEIDTSHLLGAGDAYVAGMVYYFIK 273
Query: 308 QEKPIEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
E + G ++ +R P+
Sbjct: 274 HGANFLEMAKFGFASALAATRRKEKYMPDLEAIK 307
|
| >d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Tagatose-6-phosphate kinase LacC species: Enterococcus faecalis [TaxId: 1351]
Score = 73.9 bits (180), Expect = 2e-15
Identities = 48/330 (14%), Positives = 98/330 (29%), Gaps = 37/330 (11%)
Query: 12 NPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVA 71
NP +DIS ++D +KL+ + V GG N V
Sbjct: 8 NPSIDISYLLDH-------LKLDTVNRTSQ--------------VTKTPGGKGLN---VT 43
Query: 72 QWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSL 131
+ + + G G +G G + K A + + + + + A+ G + +
Sbjct: 44 RVIHDLGGDVIATGVLGGF-HGAFIANELKKANIPQAFTSIKEETRDSIAILHEGNQTEI 102
Query: 132 VANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMM 191
+ + + + + + + ++A+ I+G P E + +
Sbjct: 103 LEAGPTVSPEEISNFLENFDQLI-KQAEIVTISGSLAKGLPSDF--YQELVQKAHAQEVK 159
Query: 192 NLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKAS 251
L + PY+ E E V+ K
Sbjct: 160 VLLDTSGDSLRQVLQGPWKPYLIKPNLEELEGLLGQDFSENPLAAVQT------ALTKPM 213
Query: 252 EIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKP 311
VI+ G D + + + + P + + G+GDA + G L ++ P
Sbjct: 214 FAGIEWIVISLGKDGAIAKHHDQFYRVKI---PTIQAKNPVGSGDATIAGLAYGLAKDAP 270
Query: 312 IEECVRAGCYTSHVIIQRSGCTYPEKPEFN 341
E ++ G Q + +
Sbjct: 271 AAELLKWGMAAGMANAQERMTGHVDVENVK 300
|
| >d2fv7a1 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.3 bits (178), Expect = 2e-15
Identities = 58/307 (18%), Positives = 103/307 (33%), Gaps = 22/307 (7%)
Query: 37 ILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEM 96
+++ LP E + GG N ++ TS + +GKD FG +
Sbjct: 14 LVSLTSRLPKTGETIHGHKFFIGFGGKGAN---QCVQAARLGAMTSMVCKVGKDSFGNDY 70
Query: 97 KKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVE 156
+N K ++ + + A +V E N+ + L + A
Sbjct: 71 IENLKQNDISTEFTYQTKDAATGTASIIVNNEGQ---NIIVIVAGANLLLNTEDLRAAAN 127
Query: 157 KAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYI 216
+ L ++P + A + + D + D
Sbjct: 128 VISRAKVMVCQLEITPATSLEALTMARRSGVKTLF-----NPAPAIADLDPQFYTLSDVF 182
Query: 217 FGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLK 276
NE+EA + + D E + + +IT GA+ VV + +
Sbjct: 183 CCNESEAEILTGLTVGSAADAGE------AALVLLKRGCQVVIITLGAEGCVVLSQTEPE 236
Query: 277 KFPVIVLPKDKLVDTNGAGDAFVGGFLSQL--VQEKPIEECVRAGCYTSHVIIQRSGC-- 332
+ K K VDT GAGD+FVG L +E+ + + + V +Q +G
Sbjct: 237 PKHIPT-EKVKAVDTTGAGDSFVGALAFYLAYYPNLSLEDMLNRSNFIAAVSVQAAGTQS 295
Query: 333 TYPEKPE 339
+YP K +
Sbjct: 296 SYPYKKD 302
|
| >d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Thermotoga maritima [TaxId: 2336]
Score = 72.8 bits (177), Expect = 3e-15
Identities = 61/302 (20%), Positives = 100/302 (33%), Gaps = 32/302 (10%)
Query: 43 HLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKL 102
H E + GG N + ++ CIG D + + + +N
Sbjct: 21 HFTKPGETQKAIEMNVFPGGKGANQAVTVA-KIGEK-GCRFVTCIGNDDYSDLLIEN--Y 76
Query: 103 AGVNVHYYEDESASTGTCAV-CVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYF 161
+ + Y S TG + G+ ++ A K E + +W + ++
Sbjct: 77 EKLGITGYIRVSLPTGRAFIEVDKTGQNRIIIFPGANAELKKELI----DWNTLSESDIL 132
Query: 162 YIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNET 221
+ N F + E++ Y+DY+ NE
Sbjct: 133 LLQNEIP------------FETTLECAKRFNGIVIFDPAPAQGINEEIFQYLDYLTPNEK 180
Query: 222 EARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVI 281
E SK E VE+ K E+ + ++ G V++ + K FP
Sbjct: 181 EIEALSKDFFGEFLTVEK------AAEKFLELGVKNVIVKLGDKGVLLVNKNEKKHFPT- 233
Query: 282 VLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGC--TYPEKPE 339
K K VDT AGD F G F L + K EE V G + + + R G + P + E
Sbjct: 234 --FKVKAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFGTAAAAISVTRLGAQSSIPAREE 291
Query: 340 FN 341
Sbjct: 292 VE 293
|
| >d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: 2-keto-3-deoxygluconate kinase species: Thermus thermophilus [TaxId: 274]
Score = 70.6 bits (171), Expect = 2e-14
Identities = 46/287 (16%), Positives = 91/287 (31%), Gaps = 19/287 (6%)
Query: 55 NVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDES 114
+E GGA N VA + ++ ++G +G+D+ G +++ + GV++ ++
Sbjct: 27 LLEVYVGGAEVN---VAVALARLGVKVGFVGRVGEDELGAMVEERLRAEGVDLTHFRRAP 83
Query: 115 ASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDS 174
TG + S + +E ++ +++G +SP++
Sbjct: 84 GFTGLY-LREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRFLHLSGITPALSPEA 142
Query: 175 IQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWET 234
+ + + R V
Sbjct: 143 RAFSLWAMEEAKRRGVRVSLDVNYRQTL----------WSPEEARGFLERALPGVDLLFL 192
Query: 235 DDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGA 294
+ E L + V+ +GA DG+ + + VD GA
Sbjct: 193 SEEEAELLFGRVEEALRALSAPEVVLKRGAKGAWAFVDGRRVEGSA---FAVEAVDPVGA 249
Query: 295 GDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCT--YPEKPE 339
GDAF G+L+ V P+EE +R + G P + +
Sbjct: 250 GDAFAAGYLAGAVWGLPVEERLRLANLLGASVAASRGDHEGAPYRED 296
|
| >d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} Length = 306 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Fructose 1-phosphate kinase FruB species: Bacillus halodurans [TaxId: 86665]
Score = 69.3 bits (168), Expect = 6e-14
Identities = 47/327 (14%), Positives = 97/327 (29%), Gaps = 45/327 (13%)
Query: 12 NPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVA 71
NP +D V+ + + GG N V+
Sbjct: 8 NPSIDYIVQVE--------------------NFQ-QGVVNRSERDRKQPGGKGIN---VS 43
Query: 72 QWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSL 131
+ + ++ T +G +G G ++ + + + + E E T + G++
Sbjct: 44 RVLKRLGHETKALGFLGGF-TGAYVRNALEKEEIGLSFIEVE---GDTRINVKIKGKQET 99
Query: 132 VANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDSI-QLVAEHAAANNKVFM 190
N +A K E +EK +AG P +I + + + A
Sbjct: 100 ELNGTAPLIKKEHVQALLEQLTELEKGDVLVLAGSVPQAMPQTIYRSMTQIAKERGAFVA 159
Query: 191 MNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKA 250
++ S + E + P + ++ + + ++ A
Sbjct: 160 VDTSGEALHEVLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQRLIGEGIESILVSFA 219
Query: 251 SEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEK 310
+ + V P ++ ++ GAGD+ V GFL+ L + K
Sbjct: 220 GDGALFASAEGMFHVNV----------------PSGEVRNSVGAGDSVVAGFLAALQEGK 263
Query: 311 PIEECVRAGCYTSHVIIQRSGCTYPEK 337
+E+ V G E+
Sbjct: 264 SLEDAVPFAVAAGSATAFSDGFCTREE 290
|
| >d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Hypothetical fructokinase ST2478 species: Sulfolobus tokodaii [TaxId: 111955]
Score = 66.4 bits (160), Expect = 5e-13
Identities = 40/289 (13%), Positives = 84/289 (29%), Gaps = 14/289 (4%)
Query: 55 NVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDES 114
E G+ N ++ I +G D+FG + + GV+V + + +
Sbjct: 26 YFEKHVAGSEAN---YCVAFIKQGNECGIIAKVGDDEFGYNAIEWLRGQGVDVSHMKIDP 82
Query: 115 ASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDS 174
++ L + + PE+ + +T++ S
Sbjct: 83 SAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDEEYVKSADLVHSSGITLAISS 142
Query: 175 IQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWET 234
A + A + + + + ++ + + F + +
Sbjct: 143 TAKEAVYKAFEIASNRSFDTNIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKIILG 202
Query: 235 DDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGA 294
+ + A K + K +GA + + V V D GA
Sbjct: 203 ESDPDKAAKAFSDYAEIIVMKLGP---KGAIVYYDGKKYYSSGYQVPV------EDVTGA 253
Query: 295 GDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRSGCT--YPEKPEFN 341
GDA G FLS + +E+ + S + + G P +
Sbjct: 254 GDALGGTFLSLYYKGFEMEKALDYAIVASTLNVMIRGDQENLPTTKDIE 302
|
| >d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} Length = 304 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Aminoimidazole riboside kinase species: Salmonella typhimurium [TaxId: 90371]
Score = 63.3 bits (152), Expect = 6e-12
Identities = 45/283 (15%), Positives = 92/283 (32%), Gaps = 18/283 (6%)
Query: 55 NVEYIAGGATQNSIRVAQWMLQIPGATSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDES 114
+ GGA+ N V + ++ G +IGC+G D G +++ + GV+V + ++
Sbjct: 20 SYLKCPGGASAN---VGVCVARLGGECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDA 76
Query: 115 ASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPDS 174
T + + + + + + YF G + ++
Sbjct: 77 DLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQDLPPFRQYEWFYFSSIGLTDRPAREA 136
Query: 175 IQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWET 234
A + +++ D + +++ + + +
Sbjct: 137 CLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGAS 196
Query: 235 DDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGA 294
+ T +I+ GAD ++ FP P+ +VDT GA
Sbjct: 197 HWQDARYYLRDLGCD-------TTIISLGADGALLITAEGEFHFPA---PRVDVVDTTGA 246
Query: 295 GDAFVGGFLSQLVQ-----EKPIEECVRAGCYTSHVIIQRSGC 332
GDAFVGG L L + + E + + + G
Sbjct: 247 GDAFVGGLLFTLSRANCWDHALLAEAISNANACGAMAVTAKGA 289
|
| >d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: PfkB-like kinase domain: Pyridoxamine kinase species: Escherichia coli [TaxId: 562]
Score = 52.1 bits (124), Expect = 3e-08
Identities = 26/176 (14%), Positives = 50/176 (28%), Gaps = 19/176 (10%)
Query: 171 SPDSIQLVAEHAAANNKVFMMNLSAPFIC-----------EFFKDALE----KVLPYMDY 215
S + + + +V N A + C E LP D
Sbjct: 86 SAEQGEHILGIVR---QVKAANPQAKYFCDPVMGHPEKGCIVAPGVAEFHVRHGLPASDI 142
Query: 216 IFGNETEARTFSKVQGWETDDVEEIALKL-SQWPKASEIRKRTAVITQGADPVVVAQDGK 274
I N E + ++ A +L +Q P+ ++ ++
Sbjct: 143 IAPNLVELEILCEHAVNNVEEAVLAARELIAQGPQIVLVKHLARAGYSRDRFEMLLVTAD 202
Query: 275 LKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSHVIIQRS 330
L + G GD G L +L+Q ++E + + I+ +
Sbjct: 203 EAWHISRPLVDFGMRQPVGVGDVTSGLLLVKLLQGATLQEALEHVTAAVYEIMVTT 258
|
| >d1lhpa_ c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: PfkB-like kinase domain: Pyridoxal kinase species: Sheep (Ovis aries) [TaxId: 9940]
Score = 40.5 bits (94), Expect = 2e-04
Identities = 20/132 (15%), Positives = 46/132 (34%), Gaps = 9/132 (6%)
Query: 208 KVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADPV 267
KV+P D I N+ EA + + ++ E+ L + + + +++
Sbjct: 136 KVVPVADIITPNQFEAELLTGRKIHSQEEALEVMDMLHSMGPDTVVITSSNLLSPRGSDY 195
Query: 268 VVAQDGKLKKFPVIVLPKDKL--------VDTNGAGDAFVGGFLSQLV-QEKPIEECVRA 318
++A + + P + ++ G GD F L+ ++
Sbjct: 196 LMALGSQRTRAPDGSVVTQRIRMEMHKVDAVFVGTGDLFAAMLLAWTHKHPNNLKVACEK 255
Query: 319 GCYTSHVIIQRS 330
H ++QR+
Sbjct: 256 TVSAMHHVLQRT 267
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 341 | |||
| d1bx4a_ | 342 | Adenosine kinase {Human (Homo sapiens) [TaxId: 960 | 100.0 | |
| d2absa1 | 350 | Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} | 100.0 | |
| d1vm7a_ | 299 | Ribokinase {Thermotoga maritima [TaxId: 2336]} | 100.0 | |
| d1v19a_ | 302 | 2-keto-3-deoxygluconate kinase {Thermus thermophil | 100.0 | |
| d2afba1 | 333 | 2-keto-3-deoxygluconate kinase {Thermotoga maritim | 100.0 | |
| d2f02a1 | 313 | Tagatose-6-phosphate kinase LacC {Enterococcus fae | 100.0 | |
| d1rkda_ | 306 | Ribokinase {Escherichia coli [TaxId: 562]} | 100.0 | |
| d2abqa1 | 306 | Fructose 1-phosphate kinase FruB {Bacillus halodur | 100.0 | |
| d2fv7a1 | 308 | Ribokinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2ajra1 | 319 | Putative sugar kinase TM0828 {Thermotoga maritima | 100.0 | |
| d2dcna1 | 308 | Hypothetical fructokinase ST2478 {Sulfolobus tokod | 100.0 | |
| d1tyya_ | 304 | Aminoimidazole riboside kinase {Salmonella typhimu | 100.0 | |
| d1vk4a_ | 288 | Hypothetical protein TM0415 {Thermotoga maritima [ | 100.0 | |
| d1vi9a_ | 288 | Pyridoxamine kinase {Escherichia coli [TaxId: 562] | 99.68 | |
| d1ub0a_ | 258 | 4-amino-5-hydroxymethyl-2-methylpyrimidine phospha | 99.49 | |
| d1lhpa_ | 309 | Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940] | 99.4 | |
| d1jxha_ | 266 | 4-amino-5-hydroxymethyl-2-methylpyrimidine phospha | 99.35 | |
| d1ekqa_ | 269 | Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ba | 98.68 | |
| d1u2xa_ | 450 | ADP-specific phosphofructokinase {Pyrococcus horik | 98.5 | |
| d1v8aa_ | 264 | Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Ar | 98.36 | |
| d1gc5a_ | 467 | ADP-dependent glucokinase {Archaeon Thermococcus l | 98.11 | |
| d1kyha_ | 275 | Hypothetical protein YxkO {Bacillus subtilis [TaxI | 98.08 | |
| d1ua4a_ | 454 | ADP-dependent glucokinase {Archaeon Pyrococcus fur | 97.96 | |
| d1l2la_ | 451 | ADP-dependent glucokinase {Archaeon Thermococcus l | 97.8 | |
| d2ax3a1 | 278 | Hypothetical protein TM0922, C-terminal domain {Th | 97.79 |
| >d1bx4a_ c.72.1.1 (A:) Adenosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Adenosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.1e-52 Score=376.22 Aligned_cols=340 Identities=54% Similarity=0.957 Sum_probs=293.5
Q ss_pred CCCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHH-hcCCCc
Q 019448 2 AQEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWM-LQIPGA 80 (341)
Q Consensus 2 ~~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l-~~lg~~ 80 (341)
|+++.|+|||++++|++.++|+.||.++++++|+..+.+..+.|...+..........+||+++|+|.+++++ .++|.+
T Consensus 1 ~~~~~il~iG~~~vD~~~~vd~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~GG~~~N~a~~~a~~l~~lG~~ 80 (342)
T d1bx4a_ 1 VRENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKA 80 (342)
T ss_dssp CCTTCEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHHHHSCCEEEEECHHHHHHHHHHHHHCSSTTC
T ss_pred CCCCEEEEECcceEEEEEEeCHHHHHHcCCCCCceeechhhHHHHHHHhhcccceEEeCCcHHHHHHHHHHHhccccCce
Confidence 5678899999999999999999999999999999999999999999999999999999999999999987653 457899
Q ss_pred EEEEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCc-cceeecccccccCCcccCCCcchhhhhccce
Q 019448 81 TSYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGE-RSLVANLSAANCYKSEHLKKPENWALVEKAK 159 (341)
Q Consensus 81 v~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 159 (341)
+.|+|.+|+|.+|+.+++.|+++||+++++...+.+|+.+++++.++. +.+....+.......+..........+..++
T Consensus 81 ~~~ig~vG~D~~G~~i~~~l~~~GVd~~~i~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (342)
T d1bx4a_ 81 ATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACITGDNRSLIANLAAANCYKKEKHLDLEKNWMLVEKAR 160 (342)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHTTCEEEEEEESSSCCCEEEEEEETTEEEEEEECGGGGGCCGGGTTTSHHHHHHHHHCS
T ss_pred EEEEeecCCChhhhhhhhhhhhhcccceeeeeecccceEEEEEecCCccceeeeccccccccchhhhhhhhhHHHHhhcc
Confidence 999999999999999999999999999999777777878777776544 4444444444444444443333445678999
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHH
Q 019448 160 YFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEE 239 (341)
Q Consensus 160 ~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~ 239 (341)
++++.++......+.+...++.+++.+..+.+++..+.+....+..+.++++++|++++|++|++.+++.......+.++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ne~Ea~~l~~~~~~~~~~~~~ 240 (342)
T d1bx4a_ 161 VCYIAGFFLTVSPESVLKVAHHASENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFETKDIKE 240 (342)
T ss_dssp EEEEEGGGGGTCHHHHHHHHHHHHHTTCEEEEECCSHHHHHHTHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCCCHHH
T ss_pred cceecccccchhHHHHHHHHHHhhhccceeecccccccchhccccchhhhhccccEEeecHHHHHHhhCcCCcccchhhh
Confidence 99999988777888888899999999999999998888777777888899999999999999999999987766778888
Q ss_pred HHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHH
Q 019448 240 IALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAG 319 (341)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a 319 (341)
+.+.+..+......+.+.+|+|+|++|++++++++..+++.++.+.++++|||||||+|+|||+++|++|+++++|+++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~agfl~~l~~g~~~~~a~~~a 320 (342)
T d1bx4a_ 241 IAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAG 320 (342)
T ss_dssp HHHHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred hHHHHHHHHhhcccCceEEEEEcccceEEEEeCCceEEEecCCCCCCCccCCCcHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 87776655443566788899999999999998888777887777777999999999999999999999999999999999
Q ss_pred HHHhhhhhhhccccCCCCCCCC
Q 019448 320 CYTSHVIIQRSGCTYPEKPEFN 341 (341)
Q Consensus 320 ~~~Aa~~v~~~g~~~p~~~~~~ 341 (341)
+++||++|++.|+++|+.|+|.
T Consensus 321 ~~~Aa~~v~~~Ga~~p~~~d~~ 342 (342)
T d1bx4a_ 321 HYAASIIIRRTGCTFPEKPDFH 342 (342)
T ss_dssp HHHHHHHTTSSSSCCCSSCCCC
T ss_pred HHHHHHHHcCcCCCCCCCCCCC
Confidence 9999999999999999999985
|
| >d2absa1 c.72.1.1 (A:10-359) Adenosine kinase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Adenosine kinase species: Toxoplasma gondii [TaxId: 5811]
Probab=100.00 E-value=1.6e-46 Score=341.73 Aligned_cols=328 Identities=32% Similarity=0.557 Sum_probs=260.2
Q ss_pred CCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEE
Q 019448 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATS 82 (341)
Q Consensus 3 ~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~ 82 (341)
.+++|+|||++++|++..++++||.++++++|+..+...++.+... ..........+||+++|+|+++++|..+|..+.
T Consensus 2 ~p~kil~iG~~~vD~~~~v~~~~l~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~GG~~~N~a~~la~L~~~g~~~~ 80 (350)
T d2absa1 2 GPMRVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYS-TLDQFNPTSLPGGSALNSVRVVQKLLRKPGSAG 80 (350)
T ss_dssp CCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGGG-TGGGGCCEEEEESHHHHHHHHHHHHHCSTTSEE
T ss_pred CCcEEEEECCceEEEEEEeCHHHHHHcCCCCCcceecCHHHHHHHH-hhhccCceEecCcHHHHHHHHHHHhccCCccEE
Confidence 4679999999999999999999999999999999888777665433 234455677899999999999999766689999
Q ss_pred EEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccceEEE
Q 019448 83 YIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFY 162 (341)
Q Consensus 83 ~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 162 (341)
|+|.||+|.+|+.+++.|++.||+++++..++..|+.+++++++++|+++.+.+....+...+.. ...+...++++
T Consensus 81 ~ig~vG~D~~G~~i~~~l~~~gv~~~~~~~~~~~t~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 156 (350)
T d2absa1 81 YMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINEKERTLCTHLGACGSFRLPEDW----TTFASGALIFY 156 (350)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCCEEEEEEEETTEEEEEEECGGGGGCCCCTTH----HHHTTTCCEEE
T ss_pred EEecCCCChhhHhHHHHHHhcCCcccccccccccceEEEEEeeccCcceEeeecccccccccccc----ccccccccccc
Confidence 99999999999999999999999999988778889999888888888888877766666554443 35678899999
Q ss_pred EeccccccCHHH-HHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCC------
Q 019448 163 IAGFFLTVSPDS-IQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETD------ 235 (341)
Q Consensus 163 i~~~~~~~~~~~-~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~------ 235 (341)
+.+..+...... ...+...++..+..+.+++..+.+...+.+..+.+++++|++++|++|++.|++.......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~~~N~~E~~~l~~~~~~~~~~~~~~~ 236 (350)
T d2absa1 157 ATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKTALS 236 (350)
T ss_dssp EEGGGGTTCHHHHHHHHHHHHTSTTCEEEEECCCHHHHHHCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCC--------
T ss_pred ceeeeeccccchhHHHHHHhhhhccceEEEecchhhhhhhhhcchhhhcccCCEEEecHHHHHHHhCCCCchhhHHHHhh
Confidence 988766555443 4444455666778899999888877777777888999999999999999999875432211
Q ss_pred --CHH---HHHH---HHhcCCccccCCccEEEEEeCCCceEEEECCe-----eEEEeceecCCCcccCCCCCchhhHHHH
Q 019448 236 --DVE---EIAL---KLSQWPKASEIRKRTAVITQGADPVVVAQDGK-----LKKFPVIVLPKDKLVDTNGAGDAFVGGF 302 (341)
Q Consensus 236 --d~~---~~~~---~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~-----~~~~~~~~~~~~~~vd~tGAGDaf~ag~ 302 (341)
..+ +... ++..... ...+++.+|+|+|++|+++++++. .++++.+..+..+++|||||||+|+|||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~vvit~G~~G~~~~~~~~~g~~~~~~~~~p~~~~~~VVDttGAGDaF~ag~ 315 (350)
T d2absa1 237 TANKEHAVEVCTGALRLLTAGQ-NTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFVGGF 315 (350)
T ss_dssp --CHHHHHHHHHHHHHHHHTTC-CCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCGGGCCCCTTHHHHHHHHH
T ss_pred hcchhhHHHHHHHHHHHHHhhh-hccCccEEEEECCCCCceeecCCCCcceeeeecccccCCCCCccCCCcHHHHHHHHH
Confidence 111 1111 1111111 345678899999999999986542 2344444444447899999999999999
Q ss_pred HHHHhcCCCHHHHHHHHHHHhhhhhhhccccCCC
Q 019448 303 LSQLVQEKPIEECVRAGCYTSHVIIQRSGCTYPE 336 (341)
Q Consensus 303 ~~~l~~g~~~~~a~~~a~~~Aa~~v~~~g~~~p~ 336 (341)
+++|++|+++++|+++|+++|+.+|++.|+++|-
T Consensus 316 l~~ll~g~~~~~al~~a~~~Aa~~v~~~Ga~l~~ 349 (350)
T d2absa1 316 LYALSQGKTVKQCIMCGNACAQDVIQHVGFSLSF 349 (350)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHTSSSCCCCC
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHhcccCCCCCC
Confidence 9999999999999999999999999999999884
|
| >d1vm7a_ c.72.1.1 (A:) Ribokinase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=5.5e-42 Score=305.00 Aligned_cols=288 Identities=23% Similarity=0.314 Sum_probs=240.8
Q ss_pred CCceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCc-E
Q 019448 3 QEGILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGA-T 81 (341)
Q Consensus 3 ~~~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~-v 81 (341)
|.++|+|+|++++|++..++ ++|.+++..+..+...++||++.|+|.++++| + .+ |
T Consensus 1 ~~m~I~ViG~~~~D~~~~v~--------------------~~p~~g~~~~~~~~~~~~GG~~~Nva~~l~~l-G--~~~~ 57 (299)
T d1vm7a_ 1 MFLVISVVGSSNIDIVLKVD--------------------HFTKPGETQKAIEMNVFPGGKGANQAVTVAKI-G--EKGC 57 (299)
T ss_dssp CCCCEEEECCCEEEEEEECS--------------------SCCCTTCEEECSEEEEEEECHHHHHHHHHHHH-H--SSCE
T ss_pred CeeEEEEeCeeeEEEEEEeC--------------------CCCCCCcEEeeeeEEEecCCHHHHHHHHHHHc-C--CCce
Confidence 45689999999999999988 67888888888889999999999999999984 3 65 8
Q ss_pred EEEeeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccceE
Q 019448 82 SYIGCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKY 160 (341)
Q Consensus 82 ~~i~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 160 (341)
.|+|.+|+|.+|+.+++.|++.||++..+. ..+|+.+.+.++ +|+|+++.+.+....++++.++. ..+...++
T Consensus 58 ~~i~~vG~D~~g~~~~~~l~~~gv~~~~~~--~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~----~~~~~~~~ 131 (299)
T d1vm7a_ 58 RFVTCIGNDDYSDLLIENYEKLGITGYIRV--SLPTGRAFIEVDKTGQNRIIIFPGANAELKKELIDW----NTLSESDI 131 (299)
T ss_dssp EEEEEECSSHHHHHHHHHHHHTTEEEEEEC--SSCCCEEEEEECTTSCEEEEEECGGGGGCCGGGCCH----HHHTTCSE
T ss_pred EEEEeeeccchhHHHHHHHhhhcccccccc--ccccceeEEEecCCCCeeEeccCCcchhCCHhHhCh----hhcccccc
Confidence 999999999999999999999999987654 456777777776 68888888878777888888764 66788899
Q ss_pred EEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHH
Q 019448 161 FYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEI 240 (341)
Q Consensus 161 v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~ 240 (341)
+++++.. +.. ...+...+.+.++.+++....+ ......+.+|++++|.+|+............+.+..
T Consensus 132 ~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 199 (299)
T d1vm7a_ 132 LLLQNEI---PFE---TTLECAKRFNGIVIFDPAPAQG------INEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEKA 199 (299)
T ss_dssp EEECSSS---CHH---HHHHHHHHCCSEEEECCCSCTT------CCGGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHHH
T ss_pred eeecccc---cch---hhhHhhhhcCceEEEecCcchh------hhHHHHhhcccccccHHHHHhhhccccccchhhhhh
Confidence 9997643 222 2334566778888888765431 123467889999999999998877655556778888
Q ss_pred HHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHH
Q 019448 241 ALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGC 320 (341)
Q Consensus 241 ~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~ 320 (341)
.+.+ ...+.+.+|+|+|++|++++++++.++++++++ +++||+||||+|.|||+++|++|+++++|+++|+
T Consensus 200 ~~~l------~~~~~~~vvvt~G~~g~~~~~~~~~~~~~~~~~---~vvDttGAGDaf~Ag~i~~l~~g~~~~~al~~a~ 270 (299)
T d1vm7a_ 200 AEKF------LELGVKNVIVKLGDKGVLLVNKNEKKHFPTFKV---KAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFGT 270 (299)
T ss_dssp HHHH------HHTTCSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred hhhh------hcCCCcEEEEeCCCCceEEEeccceEEEeeeee---eeECCCCccHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 8888 677899999999999999999999999998765 8999999999999999999999999999999999
Q ss_pred HHhhhhhhhccc--cCCCCCCC
Q 019448 321 YTSHVIIQRSGC--TYPEKPEF 340 (341)
Q Consensus 321 ~~Aa~~v~~~g~--~~p~~~~~ 340 (341)
++|+++|+++|+ .+|+++|+
T Consensus 271 ~~aa~~~~~~G~~~~~p~~~ei 292 (299)
T d1vm7a_ 271 AAAAISVTRLGAQSSIPAREEV 292 (299)
T ss_dssp HHHHHHTTSSSSGGGCCCHHHH
T ss_pred HHHHHHhCcCCCCCCCCCHHHH
Confidence 999999999998 46877664
|
| >d1v19a_ c.72.1.1 (A:) 2-keto-3-deoxygluconate kinase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: 2-keto-3-deoxygluconate kinase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=2.2e-41 Score=301.27 Aligned_cols=285 Identities=21% Similarity=0.279 Sum_probs=225.7
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i 84 (341)
.+|+|||++++|++...+ +...+......++||.|+|+|.++++ ||.+|.++
T Consensus 2 ~~i~viG~~~vD~~~~~~-------------------------~~~~~~~~~~~~~GG~~~Nva~~l~~---lg~~v~~~ 53 (302)
T d1v19a_ 2 LEVVTAGEPLVALVPQEP-------------------------GHLRGKRLLEVYVGGAEVNVAVALAR---LGVKVGFV 53 (302)
T ss_dssp CSEEEESCCEEEEEESSS-------------------------SCGGGCSEEEEEEECHHHHHHHHHHH---TTCCEEEE
T ss_pred CeEEEECcceEEEecCCC-------------------------CceeecceEEEecCcHHHHHHHHHHH---cCCCEEEE
Confidence 579999999999987443 23445566788999999999999997 56999999
Q ss_pred eeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEe-CCccceeecc--cccccCCcccCCCcchhhhhccceEE
Q 019448 85 GCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVV-GGERSLVANL--SAANCYKSEHLKKPENWALVEKAKYF 161 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~v 161 (341)
|.+|+|.+|+.+++.|++.||++.++...+..++.+.+.+. ++++++.... .....++.++.. ...+++.+++
T Consensus 54 ~~iG~D~~g~~i~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~ 129 (302)
T d1v19a_ 54 GRVGEDELGAMVEERLRAEGVDLTHFRRAPGFTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFD----PDYLEGVRFL 129 (302)
T ss_dssp EEEESSHHHHHHHHHHHHHTCBCTTEEEESSCCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSC----GGGGTTCSEE
T ss_pred EEEcCCcccccchhhhhhcccccchhccccccccccchhhccccccccccccccccchhhcccccc----HHHHhcccEE
Confidence 99999999999999999999999987655555566655564 6777654432 223344444443 2568899999
Q ss_pred EEeccccccC---HHHHHHHHHHHHhCCCeEEEeCCchh---HHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCC
Q 019448 162 YIAGFFLTVS---PDSIQLVAEHAAANNKVFMMNLSAPF---ICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETD 235 (341)
Q Consensus 162 ~i~~~~~~~~---~~~~~~~~~~a~~~~~~v~~d~~~~~---~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~ 235 (341)
++..+..... .+.+..+++..++.++.+.+|+.... ......+.+...++.+|++++|++|++...+.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~e~~~~~~~------ 203 (302)
T d1v19a_ 130 HLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSPEEARGFLERALPGVDLLFLSEEEAELLFGR------ 203 (302)
T ss_dssp EEETHHHHHCHHHHHHHHHHHHHHHTTTCEEEEECCCCTTTCCHHHHHHHHHHHGGGCSEEEEEHHHHHHHHSS------
T ss_pred eeeccccccchhHHHHHHHHHHHHHhcCCccccccchhhhccchhhhHHHHHhhhhhccchhhhhhhhhhhhhh------
Confidence 9988764333 35678888999999999998885321 12334555778899999999999999887652
Q ss_pred CHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHH
Q 019448 236 DVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEEC 315 (341)
Q Consensus 236 d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a 315 (341)
..+... ..+.+.+|||+|++|++++++++.+++|++++ +++|||||||+|+|||+|++++|+++++|
T Consensus 204 -~~~~~~---------~~~~~~viit~G~~G~~~~~~~~~~~~p~~~v---~vvDttGAGDaf~a~~~~~~~~g~~~~~a 270 (302)
T d1v19a_ 204 -VEEALR---------ALSAPEVVLKRGAKGAWAFVDGRRVEGSAFAV---EAVDPVGAGDAFAAGYLAGAVWGLPVEER 270 (302)
T ss_dssp -TTHHHH---------HTCCSEEEEECTTSCEEEEETTEEEECCCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHH
T ss_pred -hhhhhh---------hccceEEEEecCCCCCcccccccccccccccc---ccCCCCChhHHHHHHHHHHHHcCCCHHHH
Confidence 112222 33578899999999999999999999998765 79999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhccc--cCCCCCCC
Q 019448 316 VRAGCYTSHVIIQRSGC--TYPEKPEF 340 (341)
Q Consensus 316 ~~~a~~~Aa~~v~~~g~--~~p~~~~~ 340 (341)
+++|+++|++++++.|+ .+|+.+|+
T Consensus 271 ~~~a~~~Aa~~v~~~G~~~~~p~~~~i 297 (302)
T d1v19a_ 271 LRLANLLGASVAASRGDHEGAPYREDL 297 (302)
T ss_dssp HHHHHHHHHHHHTSSSSSTTCCCHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 99999999999999998 67887654
|
| >d2f02a1 c.72.1.1 (A:1-313) Tagatose-6-phosphate kinase LacC {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Tagatose-6-phosphate kinase LacC species: Enterococcus faecalis [TaxId: 1351]
Probab=100.00 E-value=3e-40 Score=295.83 Aligned_cols=293 Identities=17% Similarity=0.181 Sum_probs=229.4
Q ss_pred EEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEeee
Q 019448 8 LGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGCI 87 (341)
Q Consensus 8 ~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~~v 87 (341)
++.=++.+|+++.+| ++ .+++..+......++||++.|+|.++++ +|.++.++|.+
T Consensus 4 ~~~~np~vD~~~~vd--------------------~~-~~g~~~~~~~~~~~~GG~~~NvA~~l~~---lG~~~~~~~~v 59 (313)
T d2f02a1 4 TVTMNPSIDISYLLD--------------------HL-KLDTVNRTSQVTKTPGGKGLNVTRVIHD---LGGDVIATGVL 59 (313)
T ss_dssp EEESSCEEEEEEECS--------------------CC-CTTSEEEESCEEEEEESHHHHHHHHHHH---HTCCEEEEEEE
T ss_pred EEeCChHHcEEEEeC--------------------Cc-cCCCEEEeCeeeecCCCHHHHHHHHHHH---CCCCEEEEEEe
Confidence 333466799999998 34 3345556677889999999999999998 35999999999
Q ss_pred ecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCCcccCCC--cchhhhhccceEEEEec
Q 019448 88 GKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKK--PENWALVEKAKYFYIAG 165 (341)
Q Consensus 88 G~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~v~i~~ 165 (341)
|+| .|+.+.+.|++.||++.++.... .|+.++.++++++++.+...+ ..+++++++. ......+.++|++++++
T Consensus 60 Gdd-~~~~i~~~l~~~gi~~~~i~~~~-~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~v~~~~ 135 (313)
T d2f02a1 60 GGF-HGAFIANELKKANIPQAFTSIKE-ETRDSIAILHEGNQTEILEAG--PTVSPEEISNFLENFDQLIKQAEIVTISG 135 (313)
T ss_dssp EHH-HHHHHHHHHHHTTCCBCCEEESS-CCEEEEEEEETTEEEEEEECC--CBCCHHHHHHHHHHHHHHHTTCSEEEEES
T ss_pred cCc-cHHHHHHHHHhhccCceEEEeec-CCceEEEEEeCCCceEEeecc--ccCCHHHHHHHHHHhhhhhcccceEEEec
Confidence 976 78999999999999999986554 577777777766665544322 4455554432 12345689999999998
Q ss_pred ccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHHHH
Q 019448 166 FFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALKL 244 (341)
Q Consensus 166 ~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~~l 244 (341)
+.. ....+.+.++++.+++.+.++++|++.... ++ ......+.|++++|++|+..+++... ..++...+.+.+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~l~~n~~E~~~l~g~~~-~~~~~~~~~~~~ 209 (313)
T d2f02a1 136 SLAKGLPSDFYQELVQKAHAQEVKVLLDTSGDSL----RQ-VLQGPWKPYLIKPNLEELEGLLGQDF-SENPLAAVQTAL 209 (313)
T ss_dssp CCCBTSCTTHHHHHHHHHHHTTCEEEEECCTHHH----HH-HHHSSCCCSEECCBHHHHHHHHTCCC-CSSCHHHHHHHH
T ss_pred ccccccCHHHHHHHHHHHHhcCCceeecchHHHH----HH-HhhhcccceEEEehhhhHHHhhcccc-ccchhhHHHHHH
Confidence 653 345688899999999999999999976541 12 33456789999999999999987532 223344433333
Q ss_pred hcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHHHhh
Q 019448 245 SQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTSH 324 (341)
Q Consensus 245 ~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~Aa 324 (341)
.++ ...+++.+|||+|++|++++++++.++++++++ +++|||||||+|+|||+++|++|+++++|+++|+++|+
T Consensus 210 ~~~---~~~g~~~vivT~G~~Ga~~~~~~~~~~~~~~~v---~vvDttGAGD~f~ag~i~~l~~g~~~~~al~~A~a~aa 283 (313)
T d2f02a1 210 TKP---MFAGIEWIVISLGKDGAIAKHHDQFYRVKIPTI---QAKNPVGSGDATIAGLAYGLAKDAPAAELLKWGMAAGM 283 (313)
T ss_dssp TSG---GGTTCSEEEEECGGGCEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHH---HhcCCceeEEecccceEEEEeCCceEecccccC---CCCCCcCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 322 567889999999999999999999999987654 89999999999999999999999999999999999999
Q ss_pred hhhhhccccCCCCCCC
Q 019448 325 VIIQRSGCTYPEKPEF 340 (341)
Q Consensus 325 ~~v~~~g~~~p~~~~~ 340 (341)
+++++.|+..|+.+++
T Consensus 284 ~~~~~~g~~~~~~e~~ 299 (313)
T d2f02a1 284 ANAQERMTGHVDVENV 299 (313)
T ss_dssp HHHHSSSSSCCCHHHH
T ss_pred HHhCCCCCCCCCHHHH
Confidence 9999999988876543
|
| >d1rkda_ c.72.1.1 (A:) Ribokinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=8.8e-41 Score=296.94 Aligned_cols=293 Identities=23% Similarity=0.333 Sum_probs=228.4
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i 84 (341)
.+|+|+|++.+|+++.+| ++|.+++..+..+....+||++.|+|++|++ +|.+|.++
T Consensus 2 ~~IlviG~~~~D~~~~v~--------------------~~p~~g~~~~~~~~~~~~GG~~~NvA~~l~~---lG~~v~~~ 58 (306)
T d1rkda_ 2 GSLVVLGSINADHILNLQ--------------------SFPTPGETVTGNHYQVAFGGKGANQAVAAGR---SGANIAFI 58 (306)
T ss_dssp CEEEEECCCEEEEEEECS--------------------SCCCTTCCCCCCCEEEEEECHHHHHHHHHHH---HTCEEEEE
T ss_pred CEEEEEceeeEEEEEeeC--------------------CCCCCCceEeeceEEEecCCHHHHHHHHHHH---cCCCEEEE
Confidence 489999999999999998 6787777777888899999999999999998 35999999
Q ss_pred eeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccceEEE
Q 019448 85 GCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFY 162 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 162 (341)
|.+|+|.+|+.+++.++++|+++.++. .....++.+...+. ++.+..+..........+..... ..........+.
T Consensus 59 ~~vG~d~~~~~~~~~l~~~gi~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 136 (306)
T d1rkda_ 59 ACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEA--QRERIANASALL 136 (306)
T ss_dssp EEEESSTTHHHHHHHHHTTTEECTTEEEETTCCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHT--THHHHHHCSEEE
T ss_pred EEECCccccchhhhccccccccccccccccccccccceeeEeecCcceeeeeccchhhhhhhhhhh--hHhhhhhheeee
Confidence 999999999999999999999999874 55666777666665 56666665544444444333222 112233333333
Q ss_pred EeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHH
Q 019448 163 IAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL 242 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~ 242 (341)
... ....+............+......+.... +....++++.|++++|.+|+..+++.......+...+..
T Consensus 137 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~d~~~~n~~E~~~l~~~~~~~~~~~~~~~~ 207 (306)
T d1rkda_ 137 MQL---ESPLESVMAAAKIAHQNKTIVALNPAPAR------ELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQ 207 (306)
T ss_dssp ECS---SSCHHHHHHHHHHHHHTTCEEEECCCSCC------CCCHHHHTTCSEECCCHHHHHHHHSCCCSSHHHHHHHHH
T ss_pred ecc---cchhhhhhhHHHHhhhcccccccCchhhh------hhHHHHHhhcccccCCHHHHHHHhCCCcccchhHHHHHH
Confidence 322 23466667777777777777766664321 224568899999999999999998754333333444444
Q ss_pred HHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHHH
Q 019448 243 KLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYT 322 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~ 322 (341)
.. ...+...+|+|+|++|+.++++++.+++|++++ +++||+||||+|+|||+++|++|+++++|+++|+++
T Consensus 208 ~~------~~~~~~~vivt~G~~g~~~~~~~~~~~~~~~~~---~vvDt~GAGDaf~Ag~l~~l~~g~~~~~a~~~a~~~ 278 (306)
T d1rkda_ 208 VL------HEKGIRTVLITLGSRGVWASVNGEGQRVPGFRV---QAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAA 278 (306)
T ss_dssp HH------HHTTCSEEEEECGGGCEEEEETTEEEEECCCCC---CCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HH------hhcCCcEEEEecCCceEEEeecCceEEeCCccC---ccccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 44 567889999999999999999999999998865 899999999999999999999999999999999999
Q ss_pred hhhhhhhccc--cCCCCCCC
Q 019448 323 SHVIIQRSGC--TYPEKPEF 340 (341)
Q Consensus 323 Aa~~v~~~g~--~~p~~~~~ 340 (341)
|+++|++.|+ .+|+.+|+
T Consensus 279 aa~~v~~~G~~~~~p~~~ev 298 (306)
T d1rkda_ 279 AAIAVTRKGAQPSVPWREEI 298 (306)
T ss_dssp HHHHHTSSSSGGGCCCHHHH
T ss_pred HHHHhCCCCCCCCCCCHHHH
Confidence 9999999997 47887764
|
| >d2abqa1 c.72.1.1 (A:1-306) Fructose 1-phosphate kinase FruB {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Fructose 1-phosphate kinase FruB species: Bacillus halodurans [TaxId: 86665]
Probab=100.00 E-value=2e-40 Score=295.91 Aligned_cols=286 Identities=18% Similarity=0.184 Sum_probs=224.3
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
.+.|..++++|+++.+| +++ +++..++.+...++||++.|+|.++++ ||.++.++|
T Consensus 2 ~~~~~~np~iD~~~~v~--------------------~~~-~g~~~~~~~~~~~~GG~~~N~A~~l~~---lG~~~~~ig 57 (306)
T d2abqa1 2 IYTVTLNPSIDYIVQVE--------------------NFQ-QGVVNRSERDRKQPGGKGINVSRVLKR---LGHETKALG 57 (306)
T ss_dssp EEEEESSCEEEEEEECT--------------------TCC-SSSEEECSEEEEEEECHHHHHHHHHHH---TTCCCEEEE
T ss_pred EEEEeCchhHeEEEEeC--------------------CcC-CCCeEEcCeeeecCCCHHHHHHHHHHH---cCCCEEEEE
Confidence 35677899999999998 444 355566677788999999999999998 469999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCCcccCCC-cchhhhhccceEEEEe
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKK-PENWALVEKAKYFYIA 164 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~v~i~ 164 (341)
.+|+| .|+.+++.|+++||+++++...+ .|+.++... ++++..+. .......++++.. ......+..+++++++
T Consensus 58 ~vG~D-~g~~i~~~L~~~gi~~~~v~~~~-~t~~~i~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (306)
T d2abqa1 58 FLGGF-TGAYVRNALEKEEIGLSFIEVEG-DTRINVKIK-GKQETELN--GTAPLIKKEHVQALLEQLTELEKGDVLVLA 132 (306)
T ss_dssp EEEHH-HHHHHHHHHHHTTCEECCEEESS-CCEEEEEEE-SSSCEEEB--CCCCCCCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred EecCc-cHHHHHHHHHhcccccccceeee-eeEEEEEEe-cccccccc--cccccCCHHHhhhhhhhHhhhccCCEEEEc
Confidence 99999 69999999999999999987554 466554433 33333322 2223333333322 1223567888999998
Q ss_pred cccc-ccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHHH
Q 019448 165 GFFL-TVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIALK 243 (341)
Q Consensus 165 ~~~~-~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~~ 243 (341)
++.. ....+.+..+++.+++++.++++|+.... ........+|++++|..|+..+++....+.++..+++++
T Consensus 133 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~d~~~~~-------~~~~~~~~~~~l~~n~~E~~~~~~~~~~~~~~~~~~~~~ 205 (306)
T d2abqa1 133 GSVPQAMPQTIYRSMTQIAKERGAFVAVDTSGEA-------LHEVLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQR 205 (306)
T ss_dssp SCCCTTSCTTHHHHHHHHHHTTTCEEEEECCHHH-------HHHHGGGCCSEECCBHHHHHHHHTSCCCSHHHHHHHHHH
T ss_pred CccccchHHHHHHHHHHHHHHcCCceeccchhhH-------HHHHhhhcceeecccccccccccccccccccchhhcccc
Confidence 8653 33457788899999999999999997533 234567889999999999999987654444445566677
Q ss_pred HhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHHHHHHHHHHh
Q 019448 244 LSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAGCYTS 323 (341)
Q Consensus 244 l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~a~~~a~~~A 323 (341)
+ .+.+.+.+|||+|++|++++++++.+++|++++ +++||+||||+|+|||+++|++|+++++|+++|+++|
T Consensus 206 ~------~~~~~~~vvit~G~~G~~~~~~~~~~~~~~~~~---~vvDttGAGDaF~ag~l~~l~~g~~~~~al~~a~a~a 276 (306)
T d2abqa1 206 L------IGEGIESILVSFAGDGALFASAEGMFHVNVPSG---EVRNSVGAGDSVVAGFLAALQEGKSLEDAVPFAVAAG 276 (306)
T ss_dssp H------HHTTCCEEEEECGGGCEEEEETTEEEEECCCCC---CCCCCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred c------ccccccceeeeecccCcccccccccccccccCC---ccCCCCcHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 6 567889999999999999999999999887654 8999999999999999999999999999999999999
Q ss_pred hhhhhhccccCCCCC
Q 019448 324 HVIIQRSGCTYPEKP 338 (341)
Q Consensus 324 a~~v~~~g~~~p~~~ 338 (341)
++++++.|. |+.+
T Consensus 277 a~~~~~~G~--~~~~ 289 (306)
T d2abqa1 277 SATAFSDGF--CTRE 289 (306)
T ss_dssp HHHHHSSSC--CCHH
T ss_pred HHHhcCCCC--CCHH
Confidence 999999995 5444
|
| >d2fv7a1 c.72.1.1 (A:15-322) Ribokinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Ribokinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-40 Score=294.79 Aligned_cols=295 Identities=24% Similarity=0.316 Sum_probs=228.0
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i 84 (341)
..|+|+|++++|++..++ ++|.+++.....+...++||+++|+|++|++ +|.+|.|+
T Consensus 2 ~~i~viG~~~iD~~~~~~--------------------~~p~~g~~~~~~~~~~~~GG~~~Nva~~l~~---lg~~v~~i 58 (308)
T d2fv7a1 2 AAVVVVGSCMTDLVSLTS--------------------RLPKTGETIHGHKFFIGFGGKGANQCVQAAR---LGAMTSMV 58 (308)
T ss_dssp CSEEEECCCEEEEEEECS--------------------SCCCTTCCCCCSEEEEEEECHHHHHHHHHHH---TTCCEEEE
T ss_pred CEEEEEChhheEeEeecC--------------------CCCCCCceEeeceEEEecCCHHHHHHHHHHH---CCCCEEEE
Confidence 469999999999999887 6788888777777889999999999999997 46999999
Q ss_pred eeeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe-CCccceeecccccccCCcccCCCcchhhhhccceEEE
Q 019448 85 GCIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV-GGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFY 162 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 162 (341)
|.+|+|.+|+.+.+.|+++||++.++. .....+..+.++.+ ++++.+....+....+.+..+.. .........+..
T Consensus 59 s~vG~D~~g~~i~~~L~~~gi~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 136 (308)
T d2fv7a1 59 CKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRA--AANVISRAKVMV 136 (308)
T ss_dssp EEEESSHHHHHHHHHHHTTTEECTTEEEESSSCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHH--THHHHHHCSEEE
T ss_pred EEeccccccccccchhcccccccccccccccccccceEEEEecCCceEEEeeecchhhhchhhhhh--hhhhcccceEEe
Confidence 999999999999999999999999875 44555666656665 67887776655554554444332 123334444444
Q ss_pred EeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCHHHHHH
Q 019448 163 IAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDVEEIAL 242 (341)
Q Consensus 163 i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~~~~~~ 242 (341)
+. ...+++......+.+++.+.++.+|+...... .........+++..+.+|.+........+..+......
T Consensus 137 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~ 208 (308)
T d2fv7a1 137 CQ---LEITPATSLEALTMARRSGVKTLFNPAPAIAD-----LDPQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAAL 208 (308)
T ss_dssp EC---SSSCHHHHHHHHHHHHHTTCEEEECCCSCCTT-----CCTHHHHTCSEEEEEHHHHHHHHSSCCCSHHHHHHHHH
T ss_pred ec---cccchHHHHHHHHHhhhcCceEEecccchhhh-----hhhhHHhhhhhhhhhHHHHHHhhhhhccchhhhhhHHH
Confidence 43 24567888888899999999999998653211 11223345788889988888776544333334445555
Q ss_pred HHhcCCccccCCccEEEEEeCCCceEEEECC--eeEEEeceecCCCcccCCCCCchhhHHHHHHHH--hcCCCHHHHHHH
Q 019448 243 KLSQWPKASEIRKRTAVITQGADPVVVAQDG--KLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQL--VQEKPIEECVRA 318 (341)
Q Consensus 243 ~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~--~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l--~~g~~~~~a~~~ 318 (341)
.+ .+.+++.+|+|+|++|+++++++ ..+++|++++ +++||+||||+|+|||++++ .+|+++++|+++
T Consensus 209 ~~------~~~~~~~vivT~G~~G~~~~~~~~~~~~~~p~~~v---~vvDttGAGDaF~ag~~~~l~~~~~~~~~~a~~~ 279 (308)
T d2fv7a1 209 VL------LKRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKV---KAVDTTGAGDSFVGALAFYLAYYPNLSLEDMLNR 279 (308)
T ss_dssp HH------HTTTCSEEEEECGGGCEEEEESSCCSCEEECCCCC---CCSCCTTHHHHHHHHHHHHHHHCTTSCHHHHHHH
T ss_pred HH------HhcCCCEEEEEecccceeeecccccceeecccccc---cccCCCChhHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 55 56789999999999999999754 4677787654 78999999999999999977 589999999999
Q ss_pred HHHHhhhhhhhccc--cCCCCCCCC
Q 019448 319 GCYTSHVIIQRSGC--TYPEKPEFN 341 (341)
Q Consensus 319 a~~~Aa~~v~~~g~--~~p~~~~~~ 341 (341)
|+++|+++|++.|+ .+|+++|+.
T Consensus 280 a~~~aa~~v~~~G~~~~~p~~~ei~ 304 (308)
T d2fv7a1 280 SNFIAAVSVQAAGTQSSYPYKKDLP 304 (308)
T ss_dssp HHHHHHHHHTSSSGGGGCCCGGGSC
T ss_pred HHHHHHHHhCCCCCCCCCCCHHHHH
Confidence 99999999999999 469998864
|
| >d2ajra1 c.72.1.1 (A:1-319) Putative sugar kinase TM0828 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Putative sugar kinase TM0828 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=8.5e-40 Score=293.29 Aligned_cols=295 Identities=14% Similarity=0.129 Sum_probs=217.1
Q ss_pred EEEc-CceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEee
Q 019448 8 LGMG-NPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIGC 86 (341)
Q Consensus 8 ~~iG-~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~~ 86 (341)
+.++ ++.+|+++.+++ +.++ ..++..+..+...++||++.|+|+++++ ||.++.+++.
T Consensus 3 ~t~~lnp~iD~~~~v~~-------l~~~-----------~~~~~~~~~~~~~~~GG~~~NvA~~la~---LG~~~~~~~~ 61 (319)
T d2ajra1 3 LTVTLNPALDREIFIED-------FQVN-----------RLYRINDLSKTQMSPGGKGINVSIALSK---LGVPSVATGF 61 (319)
T ss_dssp EEEESSCEEEEEEECTT-------CCSS-----------CEEECCSGGGEEEEEESHHHHHHHHHHH---TTCCEEEEEE
T ss_pred EEEeCChHHcEEEEECC-------ccCC-----------CceeeeecceeeECCCCHHHHHHHHHHH---CCCCEEEEEE
Confidence 4444 678999999972 1112 1122234456678999999999999997 4699999999
Q ss_pred eecCchhHHHHHHHHhcCcceeee-ecCCCCceeEEEEEeC-Cccce-eecccccccCCcccCCC--cchhhhhccceEE
Q 019448 87 IGKDKFGEEMKKNSKLAGVNVHYY-EDESASTGTCAVCVVG-GERSL-VANLSAANCYKSEHLKK--PENWALVEKAKYF 161 (341)
Q Consensus 87 vG~D~~g~~i~~~l~~~gi~~~~~-~~~~~~t~~~~~~~~~-g~~~~-~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~v 161 (341)
+|+| +|+.+++.|++.|++++.. .....+|+.++.+.+. +++.. +...+ ..+++.+... ......+.+++++
T Consensus 62 vG~d-~g~~~~~~L~~~~~~i~~~~i~~~~~T~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v 138 (319)
T d2ajra1 62 VGGY-MGKILVEELRKISKLITTNFVYVEGETRENIEIIDEKNKTITAINFPG--PDVTDMDVNHFLRRYKMTLSKVDCV 138 (319)
T ss_dssp EEHH-HHHHHHHHHHHHCTTEEEEEEEESSCCEEEEEEEETTTTEEEEEECCC--CCCCHHHHHHHHHHHHHHHTTCSEE
T ss_pred ecCc-cHHHHHHHHHHhCCCCCceeEecCCCCceEEEEEECCCCeEEEEecCC--CcCCHHHHHHHHHHHHhhcccccEE
Confidence 9965 8999999999877665543 2234568888777763 44433 33322 3344443332 1224568899999
Q ss_pred EEeccc-cccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecC-HHHHHHHhhhcCCCCCCHHH
Q 019448 162 YIAGFF-LTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGN-ETEARTFSKVQGWETDDVEE 239 (341)
Q Consensus 162 ~i~~~~-~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n-~~E~~~l~~~~~~~~~d~~~ 239 (341)
+++|.. ...+.+.+.++++.++++++++++|++++.+ +.+.+...+.+++++| ++|++.+++....+.++..+
T Consensus 139 ~~sGs~~~~~~~~~~~~l~~~a~~~~~~v~~D~s~~~~-----~~~~~~~~~~~~ikpn~~~e~~~l~g~~~~~~~d~~~ 213 (319)
T d2ajra1 139 VISGSIPPGVNEGICNELVRLARERGVFVFVEQTPRLL-----ERIYEGPEFPNVVKPDLRGNHASFLGVDLKTFDDYVK 213 (319)
T ss_dssp EEESCCCTTSCTTHHHHHHHHHHHTTCEEEEECCHHHH-----HHHHHSSCCCSEECCCCTTCCSCBTTBCCCSHHHHHH
T ss_pred EEecCCcccccHHHHHHHHHHHHhcCCcccccchhhHH-----HHHhhhcccCcEEeeccHHHHHHHHhhccCCHHHHHH
Confidence 999743 3456788999999999999999999976542 3355667889999998 46777777654434445556
Q ss_pred HHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHh-cCCCHHHHHHH
Q 019448 240 IALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLV-QEKPIEECVRA 318 (341)
Q Consensus 240 ~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~-~g~~~~~a~~~ 318 (341)
+++.+ .+.+ +.+|||+|++|+.++.+++.++.+++ ++++++|||||||+|+|||+++++ +|+++++|+++
T Consensus 214 ~~~~l------~~~~-~~vvvt~G~~G~~~~~~~~~~~~~~~--~~~~vvDt~GAGDaf~ag~i~~~l~~g~~~~~a~~~ 284 (319)
T d2ajra1 214 LAEKL------AEKS-QVSVVSYEVKNDIVATREGVWLIRSK--EEIDTSHLLGAGDAYVAGMVYYFIKHGANFLEMAKF 284 (319)
T ss_dssp HHHHH------HHHS-SEEEEEETTTEEEEECSSCEEEEEES--SCCCGGGCTTHHHHHHHHHHHHHHHHCSCHHHHHHH
T ss_pred HHhhh------hhhc-ceeeeecccceeeeeccCCceEeccc--ccCCCCCCCChHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 66766 4444 56889999999999877765554432 245899999999999999999976 59999999999
Q ss_pred HHHHhhhhhhhccccCCCCCCC
Q 019448 319 GCYTSHVIIQRSGCTYPEKPEF 340 (341)
Q Consensus 319 a~~~Aa~~v~~~g~~~p~~~~~ 340 (341)
|+++|+.++++.|+.+|+++|+
T Consensus 285 a~a~aa~~~~~~g~~~~~~~~~ 306 (319)
T d2ajra1 285 GFASALAATRRKEKYMPDLEAI 306 (319)
T ss_dssp HHHHHHHHTTSSSCCCCCHHHH
T ss_pred HHHHHHHHhCCCCCCCCCHHHH
Confidence 9999999999999999987664
|
| >d2dcna1 c.72.1.1 (A:2-309) Hypothetical fructokinase ST2478 {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Hypothetical fructokinase ST2478 species: Sulfolobus tokodaii [TaxId: 111955]
Probab=100.00 E-value=4.1e-39 Score=287.12 Aligned_cols=287 Identities=19% Similarity=0.198 Sum_probs=211.7
Q ss_pred eEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEEe
Q 019448 6 ILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYIG 85 (341)
Q Consensus 6 ~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i~ 85 (341)
||++||++++|++.... ++..+......++||.+.|+|.+|++ ||.++.|+|
T Consensus 2 ki~~iG~~~~D~~~~~~-------------------------~~~~~~~~~~~~~GG~~~Nva~~l~~---lG~~~~~i~ 53 (308)
T d2dcna1 2 KLITLGEILIEFNALSP-------------------------GPLRHVSYFEKHVAGSEANYCVAFIK---QGNECGIIA 53 (308)
T ss_dssp EEEEESCCEEEEEESSS-------------------------SCGGGCCEEEEEEECHHHHHHHHHHH---TTCEEEEEC
T ss_pred EEEEECcceEEEecCCC-------------------------CceeecceeEEecCcHHHHHHHHHHH---CCCCEEEEE
Confidence 79999999999886433 22345566788999999999999997 569999999
Q ss_pred eeecCchhHHHHHHHHhcCcceeeee-cCCCCceeEEEEEe----CCcccee-ecccccccCCcccCCCcchhhhhccce
Q 019448 86 CIGKDKFGEEMKKNSKLAGVNVHYYE-DESASTGTCAVCVV----GGERSLV-ANLSAANCYKSEHLKKPENWALVEKAK 159 (341)
Q Consensus 86 ~vG~D~~g~~i~~~l~~~gi~~~~~~-~~~~~t~~~~~~~~----~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~ 159 (341)
.+|+|.+|+.+++.|+++||+++++. .++.+|+.+++... ++.+.++ ...++.....+++.. ...+..++
T Consensus 54 ~vG~D~~g~~i~~~L~~~gI~~~~i~~~~~~~t~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~----~~~~~~~~ 129 (308)
T d2dcna1 54 KVGDDEFGYNAIEWLRGQGVDVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVD----EEYVKSAD 129 (308)
T ss_dssp EEESSHHHHHHHHHHHHTTCBCTTCEEETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCC----HHHHTTCS
T ss_pred EeCCcccccccccccccccccccceeeeecccceEEEEEeccccccccccceeeeccccccccccccc----ccccccce
Confidence 99999999999999999999999874 56667777766543 2233333 333444555555554 36788899
Q ss_pred EEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCC--chhHH-HHHHHHHHhhc--CCCcEEecCHHHHHHHhhhcCCCC
Q 019448 160 YFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLS--APFIC-EFFKDALEKVL--PYMDYIFGNETEARTFSKVQGWET 234 (341)
Q Consensus 160 ~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~--~~~~~-~~~~~~~~~~l--~~~dvl~~n~~E~~~l~~~~~~~~ 234 (341)
+++.+.+........ ...+..+.+......++.. ...+. ......+.+.+ ...+.+..|++|...+.. .
T Consensus 130 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 203 (308)
T d2dcna1 130 LVHSSGITLAISSTA-KEAVYKAFEIASNRSFDTNIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKIILG-----E 203 (308)
T ss_dssp EEEEEHHHHHSCHHH-HHHHHHHHHHCSSEEEECCCCTTTSCHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHS-----C
T ss_pred EEEeeccccccccch-hHHHHHHHhhccccccccceeccccchhhhhhhhhhhccccccccccchhhhhhhhcc-----h
Confidence 999987764333322 2222333333333333322 11111 11112222332 256788899999998875 4
Q ss_pred CCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHHH
Q 019448 235 DDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIEE 314 (341)
Q Consensus 235 ~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~~ 314 (341)
.+++++.+.+ ..+.+.+|||+|++|++++++++.+++|++++ +++|++||||+|+|||+++|++|+++++
T Consensus 204 ~~~~~~~~~l-------~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v---~vvDt~GAGDaf~ag~i~~l~~g~~~~~ 273 (308)
T d2dcna1 204 SDPDKAAKAF-------SDYAEIIVMKLGPKGAIVYYDGKKYYSSGYQV---PVEDVTGAGDALGGTFLSLYYKGFEMEK 273 (308)
T ss_dssp CCHHHHHHHH-------TTTEEEEEEEEETTEEEEEETTEEEEEECCCC---CCSCCTTHHHHHHHHHHHHHTTTCCHHH
T ss_pred hhhhhhhhhc-------ccceeEEeeccccCceeeecCCccccccccee---eecCCCChHHHHHHHHHHHHHcCCCHHH
Confidence 5677776655 45689999999999999999999999998765 8999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhccc--cCCCCCCC
Q 019448 315 CVRAGCYTSHVIIQRSGC--TYPEKPEF 340 (341)
Q Consensus 315 a~~~a~~~Aa~~v~~~g~--~~p~~~~~ 340 (341)
|+++|+++|+++|+++|+ .+|+.+|+
T Consensus 274 a~~~a~~~aa~~~~~~G~~~~~p~~~~~ 301 (308)
T d2dcna1 274 ALDYAIVASTLNVMIRGDQENLPTTKDI 301 (308)
T ss_dssp HHHHHHHHHHHHTTSSSSSTTCCCHHHH
T ss_pred HHHHHHHHHHHHhCcCCCCcCCCCHHHH
Confidence 999999999999999998 46887664
|
| >d1tyya_ c.72.1.1 (A:) Aminoimidazole riboside kinase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Aminoimidazole riboside kinase species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=7.9e-39 Score=284.44 Aligned_cols=282 Identities=19% Similarity=0.290 Sum_probs=213.7
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i 84 (341)
.+|+|||++++|++.... .+....+||++.|+|.++++ +|.+|.++
T Consensus 1 ~ki~viG~~~~D~i~~~~-------------------------------~~~~~~~GG~~~NvA~~l~~---lG~~v~~v 46 (304)
T d1tyya_ 1 NKVWVIGDASVDLVPEKQ-------------------------------NSYLKCPGGASANVGVCVAR---LGGECGFI 46 (304)
T ss_dssp CCEEEESCCEEEEEECSS-------------------------------SEEEEEEECHHHHHHHHHHH---TTCCEEEE
T ss_pred CeEEEECccEEEEecCCC-------------------------------CeEEEccCcHHHHHHHHHHH---cCCCEEEE
Confidence 479999999999987432 22356799999999999997 56999999
Q ss_pred eeeecCchhHHHHHHHHhcCcceeeeec-CCCCceeEEEEEe-CCccceeecccc--cccCCcccCCCcchhhhhccceE
Q 019448 85 GCIGKDKFGEEMKKNSKLAGVNVHYYED-ESASTGTCAVCVV-GGERSLVANLSA--ANCYKSEHLKKPENWALVEKAKY 160 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~~-~~~~t~~~~~~~~-~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~ 160 (341)
|.+|+|.+|+.+++.|++.||+++++.. ....++.+....+ ++++++...... ...+.+.+.. .+...++
T Consensus 47 ~~vG~D~~g~~i~~~L~~~gi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 120 (304)
T d1tyya_ 47 GCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQDLP------PFRQYEW 120 (304)
T ss_dssp EEECSSHHHHHHHHHHHTTTEECTTEEECTTSCCCEEEEC-------CEEECCSSCGGGGCCGGGCC------CCCTTCE
T ss_pred EEecCChHHHHHHHhhhccccccccccccccccccceeeEeecccccccceecccccccccchhhhh------hhccceE
Confidence 9999999999999999999999998854 4444555555554 577776554432 2234444443 3667788
Q ss_pred EEEecccc--ccCHHHHHHHHHHHHhCCCeEEEeCCchhH----HHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCC
Q 019448 161 FYIAGFFL--TVSPDSIQLVAEHAAANNKVFMMNLSAPFI----CEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWET 234 (341)
Q Consensus 161 v~i~~~~~--~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~----~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~ 234 (341)
+++.+..+ ..+.+...++++.+++++.++.+|+..... .......+...+...+....+..+...... .
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 195 (304)
T d1tyya_ 121 FYFSSIGLTDRPAREACLEGARRMREAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSG-----A 195 (304)
T ss_dssp EEEEHHHHSSHHHHHHHHHHHHHHHHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHC-----C
T ss_pred EEEecccccccchHHHHHHHHHHhhhcCceEeeccccccccccchhhhhhhhhhcccccccccccccccccccc-----c
Confidence 89887653 224567788999999999999999864221 112334455666778888888887766543 2
Q ss_pred CCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCC---
Q 019448 235 DDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKP--- 311 (341)
Q Consensus 235 ~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~--- 311 (341)
+....+.+.+ .+.+++.+|||+|++|++++++++.+++|++++ +++||+||||+|+|||+++|++|++
T Consensus 196 ~~~~~a~~~~------~~~g~~~vivt~G~~Ga~~~~~~~~~~~p~~~v---~vvdt~GAGDaf~ag~~~~l~~g~~~~~ 266 (304)
T d1tyya_ 196 SHWQDARYYL------RDLGCDTTIISLGADGALLITAEGEFHFPAPRV---DVVDTTGAGDAFVGGLLFTLSRANCWDH 266 (304)
T ss_dssp SSGGGGSSTT------GGGTCSCEEEECGGGCEEEESSSCEEEECCCCC---CCSCCTTHHHHHHHHHHHHHTTSSSCCH
T ss_pred chHHHHHHHH------HhcccceeeeecccceeeeeccCCccccCcccc---cCCCCCCchHHHHHHHHHHHHhCCCccc
Confidence 3344444444 567889999999999999999999999988755 8999999999999999999999988
Q ss_pred --HHHHHHHHHHHhhhhhhhccc--cCCCCCCC
Q 019448 312 --IEECVRAGCYTSHVIIQRSGC--TYPEKPEF 340 (341)
Q Consensus 312 --~~~a~~~a~~~Aa~~v~~~g~--~~p~~~~~ 340 (341)
+++|+++|+++|+++|++.|+ .+|+++|+
T Consensus 267 ~~l~~al~~a~~~As~~v~~~G~~~~~P~~~ev 299 (304)
T d1tyya_ 267 ALLAEAISNANACGAMAVTAKGAMTALPFPDQL 299 (304)
T ss_dssp HHHHHHHHHHHHHHHHGGGSSSTTTTCCCHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCCCCCCCHHHH
Confidence 799999999999999999997 56888765
|
| >d1vk4a_ c.72.1.1 (A:) Hypothetical protein TM0415 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Ribokinase-like domain: Hypothetical protein TM0415 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=1.7e-34 Score=254.75 Aligned_cols=264 Identities=17% Similarity=0.160 Sum_probs=192.8
Q ss_pred ceEEEEcCceeeeEeecChhHHHHhCCCCCceEecccccccHHHHHhccCCceEecCchHHHHHHHHHHHhcCCCcEEEE
Q 019448 5 GILLGMGNPLLDISSVVDDDFLNKYDIKLNNAILAEEKHLPLYDEMASKYNVEYIAGGATQNSIRVAQWMLQIPGATSYI 84 (341)
Q Consensus 5 ~~v~~iG~~~lD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~a~n~a~~l~~l~~lg~~v~~i 84 (341)
..|+++|++.+|++...+ +.+..+||.+.|+|+++++ ||.++.++
T Consensus 7 ~~i~~vg~~~~d~~~~~~--------------------------------~~~~~~GG~~~n~a~~~~~---lG~~~~~i 51 (288)
T d1vk4a_ 7 HMITFIGHVSKDVNVVDG--------------------------------KREIAYGGGVVMGAITSSL---LGVKTKVI 51 (288)
T ss_dssp SEEEEECCCEEEEEEETT--------------------------------EEEEEEECHHHHHHHHHHH---TTCEEEEE
T ss_pred ceEEEECCceeeEEecCC--------------------------------cEEEecCCHHHHHHHHHHH---cCCCEEEE
Confidence 479999999999887543 2467899999999999997 56999999
Q ss_pred eeeecCchhHHHHHHHHhcCcceeeeecCCCCceeEEEEEeCCccceeecccccccCCcccCCCcchhhhhccceEEEEe
Q 019448 85 GCIGKDKFGEEMKKNSKLAGVNVHYYEDESASTGTCAVCVVGGERSLVANLSAANCYKSEHLKKPENWALVEKAKYFYIA 164 (341)
Q Consensus 85 ~~vG~D~~g~~i~~~l~~~gi~~~~~~~~~~~t~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~i~ 164 (341)
|.+|+|..|. .+.|+++||+++++... .+|+...++..++++...........++++++. ..+++++++.
T Consensus 52 ~~vG~D~~~~--~~~l~~~gi~~~~i~~~-~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 121 (288)
T d1vk4a_ 52 TKCTREDVSK--FSFLRDNGVEVVFLKSP-RTTSIENRYGSDPDTRESFLISAADPFTESDLA-------FIEGEAVHIN 121 (288)
T ss_dssp EEECTTTGGG--GTTTGGGTCEEEEEECS-SCEEEEEEC-----CCEEEEEECCCCCCGGGGG-------GCCSSEEEEC
T ss_pred EEeCCChHHH--HHHHHHcCCcEEeeccC-CcceEEEEEecCCCeeEEEeehhhhcCChhhhh-------hhccceEEEc
Confidence 9999999986 48899999999988643 445555555555544443333444455555554 3457888887
Q ss_pred ccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHH-------HHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCCCCCH
Q 019448 165 GFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFIC-------EFFKDALEKVLPYMDYIFGNETEARTFSKVQGWETDDV 237 (341)
Q Consensus 165 ~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~-------~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~~~d~ 237 (341)
+... .+...++++.+++++..+.+|+....+. ....+.++++++++|++++|++|++.+++ ...+
T Consensus 122 ~~~~---~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~i~~N~~E~~~l~~-----~~~~ 193 (288)
T d1vk4a_ 122 PLWY---GEFPEDLIPVLRRKVMFLSADAQGFVRVPENEKLVYRDWEMKEKYLKYLDLFKVDSREAETLTG-----TNDL 193 (288)
T ss_dssp CSST---TSSCGGGHHHHHHHCSEEEEETHHHHEEEETTEEEECCCTTHHHHGGGCSEEEEEHHHHHHHHS-----CSCH
T ss_pred hhhh---ccchHHHHHHHHHhCcceeeccccccccccccccccccHHHHHHHHHhCCcccCCHHHHHHHhh-----hhhH
Confidence 6442 2222345566678888888888532110 01223367889999999999999999986 3567
Q ss_pred HHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHh-cCCCHHHHH
Q 019448 238 EEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLV-QEKPIEECV 316 (341)
Q Consensus 238 ~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~-~g~~~~~a~ 316 (341)
++++..+ ...+.. +|++.|+.|+.++ .+..++++.+ +++++|+|||||+|+|||+++++ +|+++++|+
T Consensus 194 ~~~~~~~------~~~~~~-~v~~~g~~~~~~~-~~~~~~~~~~---~~~vvDttGAGDsF~ag~i~~~l~~g~~~~~a~ 262 (288)
T d1vk4a_ 194 RESCRII------RSFGAK-IILATHASGVIVF-DGNFYEASFR---SWSLEGRTGRGDTCTAAFLVGFVFKKMSIEKAT 262 (288)
T ss_dssp HHHHHHH------HHTTCS-SEEEEETTEEEEE-SSSEEEEECC---CSSGGGGTTHHHHHHHHHHHHHHTSCCCHHHHH
T ss_pred HHHHhhh------hcccce-eeeccccceeecc-ccccccccCC---CCccCCCCCHHHHHHHHHHHHHHHCCCCHHHHH
Confidence 7777776 344444 5666677777665 5666666654 44899999999999999999975 789999999
Q ss_pred HHHHHHhhhhhhhccc
Q 019448 317 RAGCYTSHVIIQRSGC 332 (341)
Q Consensus 317 ~~a~~~Aa~~v~~~g~ 332 (341)
++|+++|+.+|+++|+
T Consensus 263 ~~A~~~Aa~~v~~~Gp 278 (288)
T d1vk4a_ 263 KFAAAVTSVKMRHPGP 278 (288)
T ss_dssp HHHHHHHHHHTTSSSS
T ss_pred HHHHHHHHHHhCcCCC
Confidence 9999999999999996
|
| >d1vi9a_ c.72.1.5 (A:) Pyridoxamine kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: PfkB-like kinase domain: Pyridoxamine kinase species: Escherichia coli [TaxId: 562]
Probab=99.68 E-value=8.5e-17 Score=140.13 Aligned_cols=166 Identities=12% Similarity=0.074 Sum_probs=118.6
Q ss_pred ccceEEEEeccccccCHHHHHHHHHHHHhC--CCeEEEeCCch------hH-HHHHHHHHHhhcCCCcEEecCHHHHHHH
Q 019448 156 EKAKYFYIAGFFLTVSPDSIQLVAEHAAAN--NKVFMMNLSAP------FI-CEFFKDALEKVLPYMDYIFGNETEARTF 226 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~--~~~v~~d~~~~------~~-~~~~~~~~~~~l~~~dvl~~n~~E~~~l 226 (341)
.+.|.+.++-.......+.+.++++..++. +.++++||--. .. ........+++++++|++.||..|++.|
T Consensus 74 ~~~daI~tG~l~s~~~v~~i~~~l~~~k~~~p~~~~v~DPVm~d~~~~~~~~~~~~~~~~~~Llp~adiitPN~~Ea~~L 153 (288)
T d1vi9a_ 74 HTCDAVLSGYLGSAEQGEHILGIVRQVKAANPQAKYFCDPVMGHPEKGCIVAPGVAEFHVRHGLPASDIIAPNLVELEIL 153 (288)
T ss_dssp GGCCEEEECCCSCHHHHHHHHHHHHHHHHHCTTCEEEECCCCEETTTEECSCTTHHHHHHHTHHHHCSEECCCHHHHHHH
T ss_pred ccCCEEEEeccCChHHHHHHHHHHHHHhhccCCccEEEcceeecCCCCcCCChHHHHHHHHHhcccCCEEecCHHHHHHh
Confidence 357777764322111234566777766654 46788999321 11 1123333567999999999999999999
Q ss_pred hhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCc--------eEEEECCeeEEEeceecCCCcccCCCCCchhh
Q 019448 227 SKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGADP--------VVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAF 298 (341)
Q Consensus 227 ~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G--------~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf 298 (341)
++....+.++..+++++| .+.|++.||||.+..| ..++++++.+++..+.. +..+.|++|+||+|
T Consensus 154 ~g~~i~~~~~~~~aa~~L------~~~g~~~Vvvt~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~GtGD~f 226 (288)
T d1vi9a_ 154 CEHAVNNVEEAVLAAREL------IAQGPQIVLVKHLARAGYSRDRFEMLLVTADEAWHISRPLV-DFGMRQPVGVGDVT 226 (288)
T ss_dssp HTSCCCSHHHHHHHHHHH------HHTSCSEEEECCCGGGSSSTTEEEEEEECSSCEEEEEEECC-CCTTCCCSCHHHHH
T ss_pred hccccchhHHHHHHHHHH------HhcCCCEEEEEecCccccccCceeEEEEeCCceEEeccccc-ccCCCCCCChhHHH
Confidence 997666666778888888 7788999999976544 24555666655544333 33678999999999
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHhhhhhh
Q 019448 299 VGGFLSQLVQEKPIEECVRAGCYTSHVIIQ 328 (341)
Q Consensus 299 ~ag~~~~l~~g~~~~~a~~~a~~~Aa~~v~ 328 (341)
+|+|+++|++|+++++|+++|.+.-..+++
T Consensus 227 sa~l~a~l~~G~~l~~A~~~A~~~v~~~l~ 256 (288)
T d1vi9a_ 227 SGLLLVKLLQGATLQEALEHVTAAVYEIMV 256 (288)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999987665554
|
| >d1ub0a_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Thiamin biosynthesis kinases domain: 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) species: Thermus thermophilus [TaxId: 274]
Probab=99.49 E-value=2.9e-13 Score=115.68 Aligned_cols=160 Identities=16% Similarity=0.186 Sum_probs=117.8
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhCC-CeEEEeCCchhHH-------HHHHHHHHhhcCCCcEEecCHHHHHHHhh
Q 019448 157 KAKYFYIAGFFLTVSPDSIQLVAEHAAANN-KVFMMNLSAPFIC-------EFFKDALEKVLPYMDYIFGNETEARTFSK 228 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~-~~v~~d~~~~~~~-------~~~~~~~~~~l~~~dvl~~n~~E~~~l~~ 228 (341)
..|++.++-. .+.+.+..+.+..++.. .++++||...... .......+++++.+|++.||..|+..|++
T Consensus 70 ~~daIkiG~l---~s~~~~~~i~~~l~~~~~~~~v~dpv~~~~~~~~~~~~~~~~~~~~~Llp~adiiTPN~~Ea~~L~g 146 (258)
T d1ub0a_ 70 PLHAAKTGAL---GDAAIVEAVAEAVRRFGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEALLG 146 (258)
T ss_dssp CCSEEEECCC---CSHHHHHHHHHHHHHTTCCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHHHC
T ss_pred CccEEEEecc---ccchHHHHHHHHHHHhccccceEeeeeecccCccccchhHHHHHHHhhcccceeecCCHHHHhhhcC
Confidence 5688887532 35666666666555544 5677787432111 12334456789999999999999999998
Q ss_pred hcCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCC----ce-EEEECCeeEEEeceecCCCcccCCCCCchhhHHHHH
Q 019448 229 VQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGAD----PV-VVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFL 303 (341)
Q Consensus 229 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~----G~-~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~ 303 (341)
....+.++..++++.| .+.|.+.|+||.|.. .. .++++++.+.+..+.. ...++.|+||+|+++++
T Consensus 147 ~~~~~~~d~~~aa~~L------~~~g~~~Vlitg~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~GtGd~~asaia 217 (258)
T d1ub0a_ 147 RPIRTLKEAEEAAKAL------LALGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPRV---HTRNTHGTGCTLSAAIA 217 (258)
T ss_dssp SCCCSHHHHHHHHHHH------HTTSCSCEEEEEEECC---EEEEEEETTEEEEEEECCC---CCSCCTTHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH------HHhCCCeEEEeccccccccccceeccCCeEEeccccee---cCCCCCChHHHHHHHHH
Confidence 7665566777888888 778999999997532 23 3456777776665433 56788999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHhhhhhh
Q 019448 304 SQLVQEKPIEECVRAGCYTSHVIIQ 328 (341)
Q Consensus 304 ~~l~~g~~~~~a~~~a~~~Aa~~v~ 328 (341)
+.|++|.++++|++.|...-..++.
T Consensus 218 ~~La~G~~l~~Av~~A~~~v~~~i~ 242 (258)
T d1ub0a_ 218 ALLAKGRPLAEAVAEAKAYLTRALK 242 (258)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998777764
|
| >d1lhpa_ c.72.1.5 (A:) Pyridoxal kinase {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: PfkB-like kinase domain: Pyridoxal kinase species: Sheep (Ovis aries) [TaxId: 9940]
Probab=99.40 E-value=4.1e-13 Score=117.49 Aligned_cols=163 Identities=15% Similarity=0.126 Sum_probs=106.8
Q ss_pred hccceEEEEeccccccCHHHHHHHHHHHHhC--CCeEEEeCCc---------hhHHHHHHHHHH-hhcCCCcEEecCHHH
Q 019448 155 VEKAKYFYIAGFFLTVSPDSIQLVAEHAAAN--NKVFMMNLSA---------PFICEFFKDALE-KVLPYMDYIFGNETE 222 (341)
Q Consensus 155 l~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~--~~~v~~d~~~---------~~~~~~~~~~~~-~~l~~~dvl~~n~~E 222 (341)
+.+.|++.++-.......+.+.++++..+.. +.++++||-- ....+...+.++ .+++++|++.||..|
T Consensus 71 l~~~daI~tG~l~s~~~i~~i~~~l~~~~~~~p~~~~v~DPVmgd~~~g~g~~~~~~~~~~~~~~~Llp~adiITPN~~E 150 (309)
T d1lhpa_ 71 VNQYDYVLTGYTRDKSFLAMVVDIVQELKQQNPRLVYVCDPVMGDQRNGEGAMYVPDDLLPVYREKVVPVADIITPNQFE 150 (309)
T ss_dssp CCCCSEEEECCCCCHHHHHHHHHHHHHHHHHCTTCEEEECCCCSSCCCSSSCSCCCGGGHHHHHHTTGGGCSEECCCHHH
T ss_pred ccccCeeeecccCCHHHHHHHHHHHHHhhccCCCCcEEEeccccccccccccccCCHHHHHHHHHhhcCcCcEEeccHHH
Confidence 3457888764321111123455556555543 4678888842 111222344454 489999999999999
Q ss_pred HHHHhhhcCCCCCCHHHHHHHHhcCCccccCCccEEEEEeCCC------ceEEEECC------------eeEEEeceecC
Q 019448 223 ARTFSKVQGWETDDVEEIALKLSQWPKASEIRKRTAVITQGAD------PVVVAQDG------------KLKKFPVIVLP 284 (341)
Q Consensus 223 ~~~l~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~------G~~~~~~~------------~~~~~~~~~~~ 284 (341)
++.|++....+.++..+++++| .+.|++.||||.|.. +..+..+. +.++++.+.
T Consensus 151 a~~Ltg~~~~~~~~~~~aa~~L------~~~g~~~VvvTg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 222 (309)
T d1lhpa_ 151 AELLTGRKIHSQEEALEVMDML------HSMGPDTVVITSSNLLSPRGSDYLMALGSQRTRAPDGSVVTQRIRMEMHK-- 222 (309)
T ss_dssp HHHHHTCCCCSHHHHHHHHHHH------HHHSCSEEEECCCCCCCTTCTTEEEEEEEEEEC---CCCEEEEEEEEEEC--
T ss_pred HhHHhccccCCHHHHHHHHHHH------HhcCCCEEEEEccccCCCCCCcEEEEeccceeeeccccceeeeEEEeecc--
Confidence 9999997666666778888888 678999999997642 22222111 112223222
Q ss_pred CCcccCCCCCchhhHHHHHHHHhcC-CCHHHHHHHHHHHhhhhh
Q 019448 285 KDKLVDTNGAGDAFVGGFLSQLVQE-KPIEECVRAGCYTSHVII 327 (341)
Q Consensus 285 ~~~~vd~tGAGDaf~ag~~~~l~~g-~~~~~a~~~a~~~Aa~~v 327 (341)
-..+++|+||+|+|++++.+++| .++++|++.|...-..++
T Consensus 223 --i~~~~~GtGD~fsa~l~a~l~~g~~~L~~A~~~A~~~v~~~l 264 (309)
T d1lhpa_ 223 --VDAVFVGTGDLFAAMLLAWTHKHPNNLKVACEKTVSAMHHVL 264 (309)
T ss_dssp --CSSCCSSHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHH
T ss_pred --cCCCCCcccHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 23577999999999999999987 599999999987744443
|
| >d1jxha_ c.72.1.2 (A:) 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Thiamin biosynthesis kinases domain: 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD) species: Salmonella typhimurium [TaxId: 90371]
Probab=99.35 E-value=6.7e-12 Score=107.35 Aligned_cols=161 Identities=12% Similarity=0.098 Sum_probs=110.7
Q ss_pred cceEEEEeccccccCHHHHHHHHHHHHhCC-CeEEEeCCchh------HHHHHHHH-HHhhcCCCcEEecCHHHHHHHhh
Q 019448 157 KAKYFYIAGFFLTVSPDSIQLVAEHAAANN-KVFMMNLSAPF------ICEFFKDA-LEKVLPYMDYIFGNETEARTFSK 228 (341)
Q Consensus 157 ~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~-~~v~~d~~~~~------~~~~~~~~-~~~~l~~~dvl~~n~~E~~~l~~ 228 (341)
..|++.++- -.+.+.+..+.+..++.. .++++||-... ......+. .+.+++.+|++.||..|+..|.+
T Consensus 72 ~~~aIkiG~---l~s~~~i~~v~~~l~~~~~~~~vvdpv~~~~~~~~~~~~~~~~~~~~~Llp~adviTPN~~Ea~~Ll~ 148 (266)
T d1jxha_ 72 RIDTTKIGM---LAETDIVEAVAERLQRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALLD 148 (266)
T ss_dssp CCSEEEECC---CCSHHHHHHHHHHHHHTTCCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBHHHHHHHHT
T ss_pred cCceEEEcc---cchHHHHHHHHHHHHhccCCceEEeccccccccchhhHHHHHHHHHHHhhhhhheecCCHHHHHHHhc
Confidence 467777753 235677777777666654 56778873211 11222233 35689999999999999998876
Q ss_pred hcC-CCCCCHHHHHHHHhcCCccccCCccEEEEEeCCCc-----eEEEECCeeEEEeceecCCCcccCCCCCchhhHHHH
Q 019448 229 VQG-WETDDVEEIALKLSQWPKASEIRKRTAVITQGADP-----VVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGF 302 (341)
Q Consensus 229 ~~~-~~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G-----~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~ 302 (341)
... .+.++..++++.+ .+.|++.|++|-|... .+++++++.+....+.. ...++.|.||+|++++
T Consensus 149 ~~~~~~~~~~~~aa~~l------~~~g~~~Vlikg~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~hGTGc~lasai 219 (266)
T d1jxha_ 149 APHARTEQEMLAQGRAL------LAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRV---NTKNTHGTGCTLSAAL 219 (266)
T ss_dssp CCCCCSHHHHHHHHHHH------HHTTCSEEEEBC---------CEEECSSCEEEC---CC---CCSCCBTHHHHHHHHH
T ss_pred CCcccChHHHHHHHHHH------HhcCCceEEEeccccCCCcceEEEEcCCceEEEeeccc---cCCCCCCchHHHHHHH
Confidence 432 2334566777887 6789999999965432 24555655555444332 5567889999999999
Q ss_pred HHHHhcCCCHHHHHHHHHHHhhhhhhh
Q 019448 303 LSQLVQEKPIEECVRAGCYTSHVIIQR 329 (341)
Q Consensus 303 ~~~l~~g~~~~~a~~~a~~~Aa~~v~~ 329 (341)
++.|++|+++++|++.|......++.+
T Consensus 220 aa~La~G~~l~~Av~~A~~~v~~~i~~ 246 (266)
T d1jxha_ 220 AALRPRHRSWGETVNEAKAWLSAALAQ 246 (266)
T ss_dssp HHHGGGSSSHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999988888764
|
| >d1ekqa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Thiamin biosynthesis kinases domain: Hydroxyethylthiazole kinase (THZ kinase, ThiK) species: Bacillus subtilis [TaxId: 1423]
Probab=98.68 E-value=1.2e-07 Score=79.87 Aligned_cols=160 Identities=16% Similarity=0.120 Sum_probs=100.8
Q ss_pred hhhhccceEEEEeccccc-cCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcC--CCcEEecCHHHHHHHhh
Q 019448 152 WALVEKAKYFYIAGFFLT-VSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLP--YMDYIFGNETEARTFSK 228 (341)
Q Consensus 152 ~~~l~~~~~v~i~~~~~~-~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~E~~~l~~ 228 (341)
.+..+.++.++++.-.+. ...+.+...++.+.+.++|+++||..-.......+...++++ +.++|.+|..|+..|.+
T Consensus 53 ~e~~~~a~alviN~Gtl~~~~~~~m~~a~~~a~~~~~PvVLDPVgvgas~~R~~~~~~ll~~~~~tVI~gN~~Ei~~L~g 132 (269)
T d1ekqa_ 53 ADMAKIAGALVLNIGTLSKESVEAMIIAGKSANEHGVPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAHTVG 132 (269)
T ss_dssp HHHHHHSSEEEEECTTCCHHHHHHHHHHHHHHHHTTCCEEEECTTBTTBHHHHHHHHHHHHHSCCSEEEECHHHHHHHCC
T ss_pred HHHHHhccceEEecCCCCHHHHHHHHHHHHHHHHcCCCEEECCcCCCCchhHHHHHHHHHHhCCCceEcCCHHHHHHHhC
Confidence 355677899999753321 123556677788889999999999543222222333445553 46899999999999987
Q ss_pred hcCC---------CCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhH
Q 019448 229 VQGW---------ETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFV 299 (341)
Q Consensus 229 ~~~~---------~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ 299 (341)
.... +.+|..++++.+.+ +.-..|++| |+. -++.++++.+.+..- +...-..+|.||++.
T Consensus 133 ~~~~~~~gvd~~~~~~d~~~~A~~la~------~~~~vVvlk-G~~-D~I~dg~~~~~~~~G---~~~m~~itGtGc~Ls 201 (269)
T d1ekqa_ 133 VTDWLIKGVDAGEGGGDIIRLAQQAAQ------KLNTVIAIT-GEV-DVIADTSHVYTLHNG---HKLLTKVTGAGCLLT 201 (269)
T ss_dssp ---------------HHHHHHHHHHHH------HHTSEEEEC-SSS-EEEECSSCEEEECCC---CGGGGGSTTHHHHHH
T ss_pred CccCCcCCcCCcccHHHHHHHHHHHHH------hcCCEEEec-CCc-eEEEeCCeeEEecCC---ChhhccCCcchHHHH
Confidence 4321 12344556666642 222345555 543 345556666655421 113334589999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHH
Q 019448 300 GGFLSQLVQEKPIEECVRAGCYT 322 (341)
Q Consensus 300 ag~~~~l~~g~~~~~a~~~a~~~ 322 (341)
|.+.+.+..+.++.+|+..|...
T Consensus 202 ~~iaa~la~~~~~~~A~~~A~~~ 224 (269)
T d1ekqa_ 202 SVVGAFCAVEENPLFAAIAAISS 224 (269)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHH
Confidence 99998888999999888877654
|
| >d1u2xa_ c.72.1.3 (A:) ADP-specific phosphofructokinase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: ADP-specific Phosphofructokinase/Glucokinase domain: ADP-specific phosphofructokinase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.50 E-value=1.4e-05 Score=71.57 Aligned_cols=75 Identities=11% Similarity=0.071 Sum_probs=53.1
Q ss_pred ccceEEEEecccccc----C---H-H---HHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHH
Q 019448 156 EKAKYFYIAGFFLTV----S---P-D---SIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEAR 224 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~----~---~-~---~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~ 224 (341)
.+.|.++++|+++.. + . + .+.+.+...+..++++-+.+.+..-.....+.+..+++++|-+=+|++|+.
T Consensus 213 ~~~dl~vlSGlq~l~~~~~~~~~~~~~l~~~~~~l~~~~~~~i~iHlElAs~~d~~l~~~i~~~ilp~vDSlGmNEqEL~ 292 (450)
T d1u2xa_ 213 KEVDGAIFSGYQGLRTKYSDGKDANYYLRRAKEDIIEFKEKDVKIHVEFASVQDRKLRKKIITNILPFVDSVGIDEAEIA 292 (450)
T ss_dssp HTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHHHTTCEEEEECCCCCCHHHHHHHHHHHGGGSSEEEEEHHHHH
T ss_pred cCCCEEEEechhhhhccccCchhHHHHHHHHHHHHHhCCCCCCeEEEEecccchHHHHHHHHHHhccccccCCCCHHHHH
Confidence 357999999998531 1 1 1 223334444567899999998765444456667789999999999999998
Q ss_pred HHhhhc
Q 019448 225 TFSKVQ 230 (341)
Q Consensus 225 ~l~~~~ 230 (341)
.+....
T Consensus 293 ~l~~~l 298 (450)
T d1u2xa_ 293 QILSVL 298 (450)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 886543
|
| >d1v8aa_ c.72.1.2 (A:) Hydroxyethylthiazole kinase (THZ kinase, ThiK) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: Thiamin biosynthesis kinases domain: Hydroxyethylthiazole kinase (THZ kinase, ThiK) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.36 E-value=3.2e-06 Score=70.75 Aligned_cols=158 Identities=15% Similarity=0.064 Sum_probs=92.1
Q ss_pred hhhhccceEEEEecccccc-CHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhc-CCCcEEecCHHHHHHHhhh
Q 019448 152 WALVEKAKYFYIAGFFLTV-SPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVL-PYMDYIFGNETEARTFSKV 229 (341)
Q Consensus 152 ~~~l~~~~~v~i~~~~~~~-~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l-~~~dvl~~n~~E~~~l~~~ 229 (341)
.+....++.++++.-.+.. ..+.+...++.+.+.++|+++||........-.+..++++ .+.++|.+|..|+..|.+.
T Consensus 51 ~e~~~~a~al~iN~Gtl~~~~~~~m~~a~~~A~~~~~PvVLDPVgvgas~~R~~~~~~ll~~~~~vItgN~~Ei~~L~g~ 130 (264)
T d1v8aa_ 51 EEMIRLADAVVINIGTLDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISALLGE 130 (264)
T ss_dssp HHHHHHCSEEEEECTTCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHHHHH
T ss_pred HHHHHhcCceEeeCCCCCHHHHHHHHHHHHHHHHcCCCEEEcCcccCcchhHHHHHHHHhccCCcEEcCCHHHHHHHhCc
Confidence 3556778888887533211 1356677778888999999999854321111112233333 3679999999999999875
Q ss_pred cCCC---------CCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHH
Q 019448 230 QGWE---------TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVG 300 (341)
Q Consensus 230 ~~~~---------~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~a 300 (341)
.... .++..++++.+.+ +.+ ..|++| |+.- ++.++++.+.++.-. ...-..+|.||+..+
T Consensus 131 ~~~~~gvd~~~~~~~d~~~~a~~lA~-----~~~-~vVvlk-G~~D-~I~dg~~~~~~~~G~---~~m~~itGtGc~Ls~ 199 (264)
T d1v8aa_ 131 EGKTRGVDSLEYGEEEAKKLTMNAAR-----EFN-TTVAVT-GAVD-YVSDGRRTFAVYNGH---ELLGRVTGTGCMVAA 199 (264)
T ss_dssp HC----------CHHHHHHHHHHHHH-----HTT-SEEEEE-SSSE-EEECSSCEEEECCCC---GGGGGSTTHHHHHHH
T ss_pred ccCCCCCCcccccHHHHHHHHHHHHH-----HhC-CEEEec-CCee-EEEcCCEEEEeCCCC---chhccCCcccHHHHH
Confidence 3221 1334455666632 222 345554 6543 455666666655321 133346799998666
Q ss_pred HHHHHHhcCCCHHHHHHHHHH
Q 019448 301 GFLSQLVQEKPIEECVRAGCY 321 (341)
Q Consensus 301 g~~~~l~~g~~~~~a~~~a~~ 321 (341)
.+.+.+..+ +..+|...|..
T Consensus 200 ~iaa~la~~-~~~~Aa~~A~~ 219 (264)
T d1v8aa_ 200 LTGAFVAVT-EPLKATTSALV 219 (264)
T ss_dssp HHHHHHTTS-CHHHHHHHHHH
T ss_pred HHHHHHhcC-CHHHHHHHHHH
Confidence 555555555 55566555553
|
| >d1gc5a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: ADP-specific Phosphofructokinase/Glucokinase domain: ADP-dependent glucokinase species: Archaeon Thermococcus litoralis [TaxId: 2265]
Probab=98.11 E-value=0.00041 Score=62.08 Aligned_cols=74 Identities=15% Similarity=0.136 Sum_probs=51.4
Q ss_pred ccceEEEEecccccc----C----H---HHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHH
Q 019448 156 EKAKYFYIAGFFLTV----S----P---DSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEAR 224 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~----~----~---~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~ 224 (341)
...|+++++|+++.. . . +.+.+.+...++.++++-+.+.+.. ....+..+.+.++++|-+=+|++|+.
T Consensus 232 ~~~dl~vlSGlqml~~~~~~~~~~~~~l~~~~~~l~~l~~~~i~iH~ElAs~~-d~~l~~~i~~ilp~vDSlGmNEqEL~ 310 (467)
T d1gc5a_ 232 RNVELAIISGLQVLKEYYPDGTTYKDVLDRVESHLNILNRYNVKSHFEFAYTA-NRRVREALVELLPKFTSVGLNEVELA 310 (467)
T ss_dssp TTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHHHTTCEEEEECCCCC-CHHHHHHHHHHGGGCSEEEECHHHHH
T ss_pred cCCCEEEEEchhhccccCCCchhHHHHHHHHHHHHHhcCcCCCceEEEecchh-hHHHHHHHHHhccccccCCCCHHHHH
Confidence 368999999998532 1 1 2233444445567899999998543 23344555678999999999999998
Q ss_pred HHhhhc
Q 019448 225 TFSKVQ 230 (341)
Q Consensus 225 ~l~~~~ 230 (341)
.+....
T Consensus 311 ~l~~~l 316 (467)
T d1gc5a_ 311 SIMEII 316 (467)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 776543
|
| >d1kyha_ c.72.1.4 (A:) Hypothetical protein YxkO {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: YjeF C-terminal domain-like domain: Hypothetical protein YxkO species: Bacillus subtilis [TaxId: 1423]
Probab=98.08 E-value=2.7e-06 Score=71.86 Aligned_cols=158 Identities=16% Similarity=0.135 Sum_probs=99.8
Q ss_pred hccceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCCC-
Q 019448 155 VEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGWE- 233 (341)
Q Consensus 155 l~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~~- 233 (341)
.+..|.+.+.+ .+. ..+....+++.+.+.+.++++|...-.+. .....+...++.||.-|+.+|++....+
T Consensus 92 ~~~~~~~~iGp-Glg-~~~~~~~~~~~l~~~~~p~VlDAdal~~~------~~~~~~~~~IiTPH~gE~~rL~g~~~~~~ 163 (275)
T d1kyha_ 92 EETYRAIAIGP-GLP-QTESVQQAVDHVLTADCPVILDAGALAKR------TYPKREGPVILTPHPGEFFRMTGVPVNEL 163 (275)
T ss_dssp CSCCSEEEECT-TCC-SSHHHHHHHHHHTTSSSCEEECGGGCCSC------CCCCCSSCEEECCCHHHHHHHHCCCHHHH
T ss_pred hhccceEEEec-ccc-chHHHHHHHHHHhhccCceeehhhhhhhh------hcccccCceEecccHHHHHHhcCcccchh
Confidence 35678888865 222 23455667777777888999998653210 1112344568889999999998642211
Q ss_pred CCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCHH
Q 019448 234 TDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPIE 313 (341)
Q Consensus 234 ~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~~ 313 (341)
..+..++++++.+ . ...+|+-.|........+++.+ +.... .....+.|.||+++|.+...+.++.++.
T Consensus 164 ~~~~~~~a~~~~~------~-~~~~vllKG~~t~I~~~~g~~~-~~~~g---~~~lat~GsGDvLaGiIa~~lAq~~~~~ 232 (275)
T d1kyha_ 164 QKKRAEYAKEWAA------Q-LQTVIVLKGNQTVIAFPDGDCW-LNPTG---NGALAKGGTGDTLTGMILGMLCCHEDPK 232 (275)
T ss_dssp TTSHHHHHHHHHH------H-HTSEEEECSTTCEEECTTSCEE-ECCCC---CGGGCSTTHHHHHHHHHHHHHHHCSSHH
T ss_pred hccHHHHHHHHHH------H-hCCeEEeccCcceEEcCCCcee-ecCCC---CccccCCccccHHHHHHHHHHHcCCCHH
Confidence 3455666776632 2 2335555576554443334444 33222 2557889999999999999999999999
Q ss_pred HHHHHHHH----Hhhhhhhhcc
Q 019448 314 ECVRAGCY----TSHVIIQRSG 331 (341)
Q Consensus 314 ~a~~~a~~----~Aa~~v~~~g 331 (341)
+|+..|+. +|-....+.|
T Consensus 233 ~Aa~~a~~lh~~aa~~~~~~~~ 254 (275)
T d1kyha_ 233 HAVLNAVYLHGACAELWTDEHS 254 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHhcC
Confidence 99999953 3334444444
|
| >d1ua4a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: ADP-specific Phosphofructokinase/Glucokinase domain: ADP-dependent glucokinase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=97.96 E-value=3.2e-05 Score=69.23 Aligned_cols=73 Identities=11% Similarity=0.090 Sum_probs=51.6
Q ss_pred ccceEEEEecccccc--C-H---HHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhh
Q 019448 156 EKAKYFYIAGFFLTV--S-P---DSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKV 229 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~--~-~---~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~ 229 (341)
.+.|+++++|+.+.- + . +.+...+...++.++++-+.+.+.. ....+..+.++++++|-+=+|++|+..+...
T Consensus 223 ~~~dl~vlSGlqmm~~~~~~~~~~~~~~~l~~~~~~~i~IH~ElAs~~-d~~l~~~i~~vlp~vDSlGmNEqEL~~l~~~ 301 (454)
T d1ua4a_ 223 KNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNEREIPVHLEFAFTP-DEKVREEILNVLGMFYSVGLNEVELASIMEI 301 (454)
T ss_dssp GGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHHTTCCEEEECCCCC-CHHHHHHHHHHGGGCSEEEECHHHHHHHHHH
T ss_pred cCCCEEEEEccccccchhhHHHHHHHHHHHHhcCccCCceEEEecccc-HHHHHHHHHHhCCcCCcCCCCHHHHHHHHHH
Confidence 468999999998421 1 1 2333444455577899999998543 3334555667999999999999999887553
|
| >d1l2la_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: ADP-specific Phosphofructokinase/Glucokinase domain: ADP-dependent glucokinase species: Archaeon Thermococcus litoralis [TaxId: 2265]
Probab=97.80 E-value=0.00027 Score=63.07 Aligned_cols=73 Identities=12% Similarity=0.036 Sum_probs=52.1
Q ss_pred ccceEEEEecccccc--C-H---HHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhh
Q 019448 156 EKAKYFYIAGFFLTV--S-P---DSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKV 229 (341)
Q Consensus 156 ~~~~~v~i~~~~~~~--~-~---~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~ 229 (341)
...|+++++|+.+.. + . +.+...++..+..++++-+.+.+.. .+..+..+.++++++|-+=+|++|+..+...
T Consensus 221 ~~pdl~vlSGlq~l~~~~~~~~~~~~~~~l~~~~~~~i~iH~ElAs~~-d~~~~~~l~~vlp~vdSlGmNEqEL~~l~~~ 299 (451)
T d1l2la_ 221 KRSELAIISGLHPLTQENHGKPIKLVREHLKILNDLGIRAHLEFAFTP-DEVVRLEIVKLLKHFYSVGLNEVELASVVSV 299 (451)
T ss_dssp TTCSEEEEECCTTCCTTTCHHHHHHHHHHHHHHHHTTCEEEEECCCCS-SHHHHHHHHHHGGGCSEEEECHHHHHHHHHH
T ss_pred cCCCEEEEecccccccccchHHHHHHHHHHHhcCCcCCcEEEEeccch-HHHHHHHHHHhcccCccCCcCHHHHHHHHHH
Confidence 469999999998531 1 1 2344445556677899999997543 2344555667999999999999999877543
|
| >d2ax3a1 c.72.1.4 (A:212-489) Hypothetical protein TM0922, C-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: Ribokinase-like family: YjeF C-terminal domain-like domain: Hypothetical protein TM0922, C-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=97.79 E-value=5.9e-05 Score=63.63 Aligned_cols=155 Identities=15% Similarity=0.082 Sum_probs=94.1
Q ss_pred hhhccceEEEEeccccccCHHHHHHHHHHHHhCCCeEEEeCCchhHHHHHHHHHHhhcCCCcEEecCHHHHHHHhhhcCC
Q 019448 153 ALVEKAKYFYIAGFFLTVSPDSIQLVAEHAAANNKVFMMNLSAPFICEFFKDALEKVLPYMDYIFGNETEARTFSKVQGW 232 (341)
Q Consensus 153 ~~l~~~~~v~i~~~~~~~~~~~~~~~~~~a~~~~~~v~~d~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E~~~l~~~~~~ 232 (341)
...+..+.+++.+ .+....+....+.+.......++.+|...-.+. ....+ ...+..-++.|+..|+++|++....
T Consensus 93 ~~~~~~~a~~iGp-Glg~~~~~~~~~~~~~~~~~~~~vldadal~~~--~~~~l-~~~~~~~IlTPH~gE~~rL~~~~~~ 168 (278)
T d2ax3a1 93 ELSKDVDVVAIGP-GLGNNEHVREFVNEFLKTLEKPAVIDADAINVL--DTSVL-KERKSPAVLTPHPGEMARLVKKTVG 168 (278)
T ss_dssp HHHHTCSEEEECT-TCCCSHHHHHHHHHHHHHCCSCEEECHHHHHTC--CHHHH-HTCSSCEEECCCHHHHHHHHTCCHH
T ss_pred HhcccCCEEEecC-CcccchHHHHHHHHHHhccchheecchhhhhhh--hhhhh-hhcCCCEEeCCCHhHHHHHhhcccc
Confidence 4457789998865 334445555555555667778888887543211 11112 2223456788999999999875322
Q ss_pred CCCCHHHHHHHHhcCCccccCCccEEEEEeCCCceEEEECCeeEEEeceecCCCcccCCCCCchhhHHHHHHHHhcCCCH
Q 019448 233 ETDDVEEIALKLSQWPKASEIRKRTAVITQGADPVVVAQDGKLKKFPVIVLPKDKLVDTNGAGDAFVGGFLSQLVQEKPI 312 (341)
Q Consensus 233 ~~~d~~~~~~~l~~~~~~~~~~~~~vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~vd~tGAGDaf~ag~~~~l~~g~~~ 312 (341)
+..+..+.++.+.+ .. ..+|+-.|.. .++.++++.+..+. . .....+.|.||+.++.+.+-|.++.++
T Consensus 169 ~~~~~~~~a~~~a~-----~~--~~~vvlKG~~-t~i~~~~~~~~~~~-g---~~~la~~GtGDvLaGiIaallAq~~~~ 236 (278)
T d2ax3a1 169 DVKYNYELAEEFAK-----EN--DCVLVLKSAT-TIVTDGEKTLFNIT-G---NTGLSKGGSGDVLTGMIAGFIAQGLSP 236 (278)
T ss_dssp HHTTCHHHHHHHHH-----HH--TSEEEECSSS-EEEECSSCEEEECC-C---C-CCSSTTHHHHHHHHHHHHHHTTCCH
T ss_pred hhhhHHHHHHHHHH-----Hc--CCcEEecCcc-ccccCcccceeecC-C---CCccccccchhHHHHHHHHHHHcCCCH
Confidence 22333455655532 12 2244444543 34445555444332 1 245678999999998888888999999
Q ss_pred HHHHHHHHHHh
Q 019448 313 EECVRAGCYTS 323 (341)
Q Consensus 313 ~~a~~~a~~~A 323 (341)
.+|...|+..-
T Consensus 237 ~~A~~~a~~lh 247 (278)
T d2ax3a1 237 LEASTVSVYLH 247 (278)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999886443
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