Citrus Sinensis ID: 019473

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340
Protein Sequence
MRSLTLPWSGLKAHSLPSSASYPKASKSCGSKLFPFNSLCKNQTSTSKKLSLRNPYLNFSRELCRDPGASCENRNDVDCKNCKMTRESVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYSNFNLSH
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccEEEEHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccEEEccHHHcccccccccccccccccccccEccccccccccccccccEEEEcccEEEEEEccEccccccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccccEcccccccccccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccEEEEHHHHHHHHHHHHHHHHHHHHHHHccHEEEEEEEccc
Coil and Loop (DISEMBL)
mrsltlpwsglkahslpssasypkaskscgsklfpfnslcknqtstskklslrnpylnfsrelcrdpgascenrndvdcknckmtRESVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFasglqsfpflgdlgdiSRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRtfhyvdeilpfrfgqtdlpiddIAAVCLLVYFGVSTLldaastdglksedeQKEAELAVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAassplgviGGALAGHVVATLLAVLGGSLLGTFLSEKVysnfnlsh
Flexible Loop (DISEMBL)
mrsltlpwsglkahslpssasypKASKSCGSKLFPFNSLCKnqtstskklslrnpYLNFSrelcrdpgascenrndvdcknCKMTRESVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYSNFNLSH
Low Complexity Region (SEG)
MRSLTLPWSGLKAHslpssasypkasksCGSKLFPFNSLCKNQTSTSKKLSLRNPYLNFSRELCRDPGASCENRNDVDCKNCKMTRESVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIaallaarnsaaTVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNgagiiaaastiistFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYSNFNLSH
Disordered region (IsUnstruct)
******************************************************PYLNFSRELCRD****C*NRNDVDCKNCKMTRESVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDA*********************FSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYSNF****
Disordered Region (DISOPRED)
*****************************************************************************************************************************************ISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTD*****************FSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYSNFNLS*
Disordered Region (DISEMBL)
MRSLTLPWSGLKAHS*************CGSKLFPFNSLCKNQTSTSKKLSLRNPYLNFSRELCRDPGASCENRNDVDCKNCKMTRESVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAAS**************LAVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYSNFNLSH
Disordered Region (DISPRO)
*******WSGLKAHSLPSSASYPKASKSCGSKLFPFNSLCKNQTSTSKKLSLRNPYLNFSRELCRDPGASCENRNDVDCKNCKMTRESVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDG*********************AGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYSNFNLS*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRSLTLPWSGLKAHSLPSSASYPKASKSCGSKLFPFNSLCKNQTSTSKKLSLRNPYLNFSRELCRDPGASCENRNDVDCKNCKMTRESVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYSNFNLSH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	340	2.2.26 [Sep-21-2011]
Q94AX5	370	GDT1-like protein 1, chlo	yes	no	0.855	0.786	0.646	6e-92
B8AAM2	341	GDT1-like protein 1, chlo	N/A	no	0.655	0.653	0.761	1e-85
Q5NAY7	341	GDT1-like protein 1, chlo	yes	no	0.655	0.653	0.756	1e-85
Q9T0H9	359	GDT1-like protein 2, chlo	no	no	0.544	0.515	0.447	2e-38
Q2R2Z4	347	GDT1-like protein 2, chlo	no	no	0.544	0.533	0.47	5e-38
P52876	206	GDT1-like protein sll0615	N/A	no	0.526	0.868	0.384	4e-27
Q9HC07	324	Transmembrane protein 165	yes	no	0.535	0.561	0.342	1e-20
Q93Y38	293	GDT1-like protein 3 OS=Ar	no	no	0.523	0.607	0.365	3e-20
Q10320	287	GDT1-like protein C17G8.0	yes	no	0.529	0.627	0.324	4e-19
Q2R4J1	279	GDT1-like protein 3 OS=Or	no	no	0.508	0.620	0.363	8e-19

>sp|Q94AX5|GDT11_ARATH GDT1-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=At1g64150 PE=2 SV=2

 Score =  337 bits (865), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 201/311 (64%), Positives = 222/311 (71%), Gaps = 20/311 (6%)

Query: 40  CKNQTSTSKKLSLRNPYL-----NFSRELCRDPGASCENRNDVDC-----------KNCK 83
           C +        S+RN Y         R   +  G  C  RND  C           +N  
Sbjct: 38  CVSAYPIPIGFSVRNQYFSRCLTQLRRNESQQLGFRCFQRNDAACYLEKAESEEHDRNLD 97

Query: 84  MTRES--VHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSF-PFLGDLGDISR 140
           +  ES   H+      ++ F+   G + L G+  A AA    +  QS     GDLGDIS 
Sbjct: 98  VLVESSIAHSRREIQRVLMFLAVSGSVALLGTDPAFAASSIPNVTQSLVTSFGDLGDISS 157

Query: 141 GFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVD 200
           GFASAFLLIFFSELGDKTFFIAALLAARNSAATVF GTFGAL  MT+ISV+LGRTFHYVD
Sbjct: 158 GFASAFLLIFFSELGDKTFFIAALLAARNSAATVFVGTFGALGIMTIISVVLGRTFHYVD 217

Query: 201 EILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNG 260
           E+LPFRFG TDLPIDDIAAVCLLVYFGVSTLLDA S +G K+++EQKEAELAVSE SGNG
Sbjct: 218 EVLPFRFGGTDLPIDDIAAVCLLVYFGVSTLLDAVSDEG-KADEEQKEAELAVSELSGNG 276

Query: 261 AGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLG 320
           AGI+AAA+TIISTF LVFVAEWGDKSFFSTIALAAASSPLGVI GALAGH  ATLLAVLG
Sbjct: 277 AGIVAAANTIISTFALVFVAEWGDKSFFSTIALAAASSPLGVIAGALAGHGAATLLAVLG 336

Query: 321 GSLLGTFLSEK 331
           GSLLG FLSEK
Sbjct: 337 GSLLGNFLSEK 347

Arabidopsis thaliana (taxid: 3702)

>sp|B8AAM2|GDT11_ORYSI GDT1-like protein 1, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_00941 PE=3 SV=2

 Score =  317 bits (811), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 172/226 (76%), Positives = 193/226 (85%), Gaps = 3/226 (1%)

Query: 107 LLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLA 166
           +L LQGSQ A+A  +F  G+Q    +GDLGDIS GFASAFLLIFFSELGD+TFFIAALLA
Sbjct: 96  VLMLQGSQQALAGTEFM-GMQDV--VGDLGDISTGFASAFLLIFFSELGDRTFFIAALLA 152

Query: 167 ARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYF 226
           ARNS A +F GTFGALA MT+ISV+LGR FHYVD I+PF FG TD P+DD  A CLLVY+
Sbjct: 153 ARNSGAIIFLGTFGALAVMTIISVVLGRAFHYVDGIIPFSFGGTDFPVDDFLAACLLVYY 212

Query: 227 GVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKS 286
           GV+TLLDAAS D  K  +EQ+EAELAVS+F GNGAGII+AASTI STF LVF+AEWGDKS
Sbjct: 213 GVTTLLDAASGDEEKMNEEQEEAELAVSKFLGNGAGIISAASTIASTFVLVFIAEWGDKS 272

Query: 287 FFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKV 332
           FFSTIALAAASSPLGVI G+LAGH VATL+AVLGGSLLGTFLSEK+
Sbjct: 273 FFSTIALAAASSPLGVIAGSLAGHAVATLIAVLGGSLLGTFLSEKI 318

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q5NAY7|GDT11_ORYSJ GDT1-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0221700 PE=3 SV=2

 Score =  316 bits (810), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 171/226 (75%), Positives = 193/226 (85%), Gaps = 3/226 (1%)

Query: 107 LLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLA 166
           +L LQGSQ A+A  +F  G+Q    +GDLGDIS GFASAFLLIFFSELGD+TFFIAALLA
Sbjct: 96  VLMLQGSQQALAGTEFM-GMQDV--VGDLGDISTGFASAFLLIFFSELGDRTFFIAALLA 152

Query: 167 ARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYF 226
           ARNS A +F GTFGALA MT+ISV+LGR FHYVD I+PF FG TD P+DD  A CLLVY+
Sbjct: 153 ARNSGAIIFLGTFGALAVMTIISVVLGRAFHYVDGIIPFSFGGTDFPVDDFLAACLLVYY 212

Query: 227 GVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKS 286
           G++TLLDAAS D  K  +EQ+EAELAVS+F GNGAGII+AASTI STF LVF+AEWGDKS
Sbjct: 213 GITTLLDAASGDEEKMNEEQEEAELAVSKFLGNGAGIISAASTIASTFVLVFIAEWGDKS 272

Query: 287 FFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKV 332
           FFSTIALAAASSPLGVI G+LAGH VATL+AVLGGSLLGTFLSEK+
Sbjct: 273 FFSTIALAAASSPLGVIAGSLAGHAVATLIAVLGGSLLGTFLSEKI 318

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9T0H9|GDT12_ARATH GDT1-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=At4g13590 PE=1 SV=2

 Score =  159 bits (403), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/201 (44%), Positives = 130/201 (64%), Gaps = 16/201 (7%)

Query: 141 GFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVD 200
           GF +AF LIF SE+GDKTFFIAALLA +     V  G+ GAL+ MT++SV++G+ F  V 
Sbjct: 145 GFTAAFSLIFVSEIGDKTFFIAALLAMQYEKTLVLLGSMGALSLMTILSVVIGKIFQSV- 203

Query: 201 EILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSED---------EQKEAEL 251
              P +F QT LPI + AA+ LL++FG+ ++ DA     +++++         E  EAE 
Sbjct: 204 ---PAQF-QTTLPIGEYAAIALLMFFGLKSIKDAWDLPPVEAKNGEETGIELGEYSEAEE 259

Query: 252 AVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHV 311
            V E +     +      +  +F+LVF AEWGD+S  +T+AL AA SPLGV  GA+AGH+
Sbjct: 260 LVKEKASKK--LTNPLEILWKSFSLVFFAEWGDRSMLATVALGAAQSPLGVASGAIAGHL 317

Query: 312 VATLLAVLGGSLLGTFLSEKV 332
           VAT+LA++GG+ L  ++SEK+
Sbjct: 318 VATVLAIMGGAFLANYISEKL 338

Arabidopsis thaliana (taxid: 3702)

>sp|Q2R2Z4|GDT12_ORYSJ GDT1-like protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0544500 PE=2 SV=1

 Score =  158 bits (400), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 94/200 (47%), Positives = 123/200 (61%), Gaps = 15/200 (7%)

Query: 141 GFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVD 200
           GF +AF LIF SE+GDKTFFIAALLA +   A V  G+  AL+ MT++SVI+GR F  V 
Sbjct: 134 GFTAAFTLIFVSEIGDKTFFIAALLAMQYQRALVLLGSMAALSLMTIVSVIIGRIFQSV- 192

Query: 201 EILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDA--------ASTDGLKSEDEQKEAELA 252
              P +F QT LPI + AA+ LL +FG  ++ DA         +  G     E  EAE  
Sbjct: 193 ---PAQF-QTTLPIGEYAAIALLAFFGFKSIKDAWQLPDNANGNLQGNSESGELAEAEEL 248

Query: 253 VSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVV 312
           V E       + +    +  +F+LVF AEWGD+S  +TIAL AA SP GV  GA+AGH+V
Sbjct: 249 VKEKVAKK--LTSPLEVLWKSFSLVFFAEWGDRSMLATIALGAAQSPFGVASGAIAGHLV 306

Query: 313 ATLLAVLGGSLLGTFLSEKV 332
           AT LA++GG+ L  +LSEK+
Sbjct: 307 ATFLAIVGGAFLANYLSEKL 326

Oryza sativa subsp. japonica (taxid: 39947)

>sp|P52876|Y615_SYNY3 GDT1-like protein sll0615 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0615 PE=3 SV=1

 Score =  122 bits (306), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 107/190 (56%), Gaps = 11/190 (5%)

Query: 142 FASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDE 201
           F +  LLI  SELGDKTFFIA +LA R     V  G  G LAAMT++SV++G+ F +   
Sbjct: 5   FTAGLLLITVSELGDKTFFIAMILAMRYPRRWVLVGVVGGLAAMTILSVLMGQIFTF--- 61

Query: 202 ILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGA 261
            LP R+        + A V L + FG   L DA       + +E ++AE A++       
Sbjct: 62  -LPTRY-------INYAEVALFLIFGTKLLWDARRIKATANLEEMEDAEKAIASGEKKLK 113

Query: 262 GIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGG 321
            +      ++ +F L FVAEWGD++  +TIALAA+++  GV  GA+ GH +  ++AV+GG
Sbjct: 114 IVPRGWGIVVESFALTFVAEWGDRTQIATIALAASNNAWGVSAGAILGHTICAVIAVMGG 173

Query: 322 SLLGTFLSEK 331
             +   +SEK
Sbjct: 174 KFVAGRISEK 183

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|Q9HC07|TM165_HUMAN Transmembrane protein 165 OS=Homo sapiens GN=TMEM165 PE=1 SV=1

 Score =  100 bits (250), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 104/216 (48%), Gaps = 34/216 (15%)

Query: 142 FASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDE 201
           F +A  +I  SELGDKTFFIAA++A R +  TV AG   AL  MT +SV+ G    Y   
Sbjct: 97  FVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFG----YATT 152

Query: 202 ILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDA--ASTDGLKSEDEQKEAELAV--SEFS 257
           ++P  +           +  L   FG+  L +    S D  + E E+ +AEL     EF 
Sbjct: 153 VIPRVY-------TYYVSTVLFAIFGIRMLREGLKMSPDEGQEELEEVQAELKKKDEEFQ 205

Query: 258 G----NGAGIIAAASTI---------------ISTFTLVFVAEWGDKSFFSTIALAAASS 298
                NG G +   ++I               +   TL F+AEWGD+S  +TI LAA   
Sbjct: 206 RTKLLNGPGDVETGTSITVPQKKWLHFISPIFVQALTLTFLAEWGDRSQLTTIVLAARED 265

Query: 299 PLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYS 334
           P GV  G   GH + T LAV+GG ++   +S +  +
Sbjct: 266 PYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVT 301

Homo sapiens (taxid: 9606)

>sp|Q93Y38|GDT13_ARATH GDT1-like protein 3 OS=Arabidopsis thaliana GN=At5g36290 PE=2 SV=1

 Score = 99.8 bits (247), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/194 (36%), Positives = 104/194 (53%), Gaps = 16/194 (8%)

Query: 144 SAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEIL 203
           S+F +I  +E+GD+TF IAAL+A R+  ATV +G   AL  MT++S  LGR       I+
Sbjct: 87  SSFSMILVTEIGDETFIIAALMAMRHPKATVLSGALSALFVMTILSTGLGR-------IV 139

Query: 204 PFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGI 263
           P    +      + AA  L  +FG+  L  A  +   KS  +++  E+     SG G   
Sbjct: 140 PNLISRKH---TNSAATVLYAFFGLRLLYIAWRSTDSKSNQKKEMEEVEEKLESGQGKTP 196

Query: 264 IA------AASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLA 317
                        + +F L F+AEWGD+S  +TIALA   + +GV  GA  GH V T LA
Sbjct: 197 FRRLFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAIGVAIGASIGHTVCTSLA 256

Query: 318 VLGGSLLGTFLSEK 331
           V+GGS+L + +S++
Sbjct: 257 VVGGSMLASRISQR 270

Arabidopsis thaliana (taxid: 3702)

>sp|Q10320|YD68_SCHPO GDT1-like protein C17G8.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17G8.08c PE=3 SV=1

 Score = 95.9 bits (237), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 105/225 (46%), Gaps = 45/225 (20%)

Query: 137 DISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTF 196
           D  R    +  +IF  E+GDKTF +AALLA  NS  TVFAG++ AL  MT++ V+LG   
Sbjct: 45  DFLRSLIFSISMIFGCEIGDKTFIVAALLAFENSRLTVFAGSYSALFIMTLLGVLLG--- 101

Query: 197 HYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAA----STDGLKSEDEQKEAELA 252
           H    + P +       + DI    L V FG+  L++A     S + +  E +    E+A
Sbjct: 102 HAAPLLFPRK-------LTDILGGVLFVIFGIKMLMEAKEVMDSKESMSDEFQNVRNEIA 154

Query: 253 -----------------------------VSEFSGNGAGIIAA--ASTIISTFTLVFVAE 281
                                        +S+    G  ++A   +   I  F L FV+E
Sbjct: 155 ANGPIDQLLEEGAAPSHYTGHRSRSGHTLMSQLKSKGRNVMATLFSPLFIKAFALTFVSE 214

Query: 282 WGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGT 326
           WGD+S  +TIA+AA+ +  GV  GA  GH   T LAV+ G  + T
Sbjct: 215 WGDRSQIATIAMAASDNVYGVFMGANVGHACCTALAVISGKYIST 259

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q2R4J1|GDT13_ORYSJ GDT1-like protein 3 OS=Oryza sativa subsp. japonica GN=Os11g0472500 PE=2 SV=1

 Score = 94.7 bits (234), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 101/190 (53%), Gaps = 17/190 (8%)

Query: 148 LIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRF 207
           +I  SE+GD+TF IAAL+A R+  + V +G   AL  MTV+S  LGR       I+P   
Sbjct: 78  MILVSEIGDETFIIAALMAMRHPKSIVLSGALSALYVMTVLSTGLGR-------IVPNLI 130

Query: 208 GQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIA-- 265
            +      + AA  L ++FG+  L  A  +D  K   +++  E+     SG G   +   
Sbjct: 131 SRKH---TNSAATVLYLFFGLRLLYIAWKSDP-KGSQKKEMEEVEEKLESGQGKSTLRRF 186

Query: 266 ----AASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGG 321
                    +  F L F+AEWGD+S  +TIALA   + +GV  GA  GH V T LAV+GG
Sbjct: 187 FGRFCTPIFLEAFILTFLAEWGDRSQIATIALATHKNAIGVAVGASLGHTVCTSLAVIGG 246

Query: 322 SLLGTFLSEK 331
           S+L + +S++
Sbjct: 247 SMLASKISQR 256

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	340
255537647	375	Transmembrane protein TPARL, putative [R	0.891	0.808	0.631	1e-108
297742269	393	unnamed protein product [Vitis vinifera]	0.961	0.832	0.632	1e-107
449452426	342	PREDICTED: GDT1-like protein 1, chloropl	0.876	0.871	0.657	1e-107
225426088	260	PREDICTED: GDT1-like protein 1, chloropl	0.694	0.907	0.851	1e-99
359806660	347	uncharacterized protein LOC100809618 [Gl	0.829	0.812	0.673	2e-98
357481519	403	Transmembrane protein [Medicago truncatu	0.873	0.736	0.641	3e-94
356540420	321	PREDICTED: LOW QUALITY PROTEIN: GDT1-lik	0.808	0.856	0.649	3e-92
297836959	368	predicted protein [Arabidopsis lyrata su	0.817	0.755	0.688	2e-91
18407980	370	uncharacterized protein [Arabidopsis tha	0.855	0.786	0.646	4e-90
15010676	370	At1g64150/F22C12_10 [Arabidopsis thalian	0.85	0.781	0.652	2e-89

>gi|255537647|ref|XP_002509890.1| Transmembrane protein TPARL, putative [Ricinus communis] gi|223549789|gb|EEF51277.1| Transmembrane protein TPARL, putative [Ricinus communis]

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 228/361 (63%), Positives = 253/361 (70%), Gaps = 58/361 (16%)

Query: 1   MRSLTLPWSGLKAHSLPSSASYPKASKSCGSKLFPFNSLCKNQTSTSKKLSLRNPYLNFS 60
           MRS+TL  S L+    P   S           L P NS  K ++S   KLS RNP L FS
Sbjct: 1   MRSITLSESALRLPPCPKPVS-----------LLPLNSFSKKRSS---KLSFRNPCLTFS 46

Query: 61  R---ELCRD----------PGASCENRNDV-----DCKNCKMTRES-------------- 88
           R   + C            P  S +N N +     DC+N + +RES              
Sbjct: 47  RYSRQWCEYSIQEAFRHFLPMVS-KNFNGLEVRGLDCQNFQASRESMPVLDDICFLDKLS 105

Query: 89  --VHNLANDS---------GLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGD 137
             V ++  D          GL+KF++  G LT QGSQ A A  D A G QS P+LGDLGD
Sbjct: 106 TKVKSIKEDEVAASTTSYGGLLKFMLLVGYLTFQGSQQAFAGTDIAVGSQSIPYLGDLGD 165

Query: 138 ISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFH 197
           IS GFASAFLLIFFSELGDKTFFIAALLAARNSAATVF GTFGALA MT+ISV+LGRTFH
Sbjct: 166 ISTGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALAVMTIISVVLGRTFH 225

Query: 198 YVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFS 257
           YVDEILPFR G+TDLP+DDIAAVCLLVYFGVSTL+DA+S DGLK+EDEQKEAELAVSEFS
Sbjct: 226 YVDEILPFRLGETDLPVDDIAAVCLLVYFGVSTLIDASSGDGLKAEDEQKEAELAVSEFS 285

Query: 258 GNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLA 317
           GNGAGI+AAASTIISTF LVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGH VATL+A
Sbjct: 286 GNGAGILAAASTIISTFVLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLIA 345

Query: 318 V 318
           V
Sbjct: 346 V 346

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297742269|emb|CBI34418.3| unnamed protein product [Vitis vinifera]

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 238/376 (63%), Positives = 269/376 (71%), Gaps = 49/376 (13%)

Query: 1   MRSLTLPWSGLKAHSLPSSASYPKASKSCGSKLFPFNSLCKNQTSTSKKLSLRNPYLNFS 60
           MR++TL  S L+ HSL S    PK  K   S LF  NS  K   S   KLS + P L FS
Sbjct: 1   MRTITLSESVLRTHSLHSPC--PKPPKFFSSYLFSLNSRVKEHNS---KLSHQYPRLVFS 55

Query: 61  RELCRDPGASC------------ENRNDVD---CKNCKMTRESVHNL------------- 92
           R   R    +C            EN + ++   C N K +++ +HN+             
Sbjct: 56  RFSRRWGENTCGKLFGQFLEKDWENSDGIELRYCWNGKASKQLLHNVDDFGFSDKSPAKI 115

Query: 93  ----------------ANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLG 136
                            +  GL+KF++ FG LTLQ SQ AVA  DFASGLQ   +LGDLG
Sbjct: 116 NYKRENHTTRSIPVLDTSMGGLLKFMLVFGFLTLQDSQQAVAGSDFASGLQLNSYLGDLG 175

Query: 137 DISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTF 196
           DIS GF SAFLLIFFSELGDKTFFIAALLAARNS A VF GTFGALA MT+ISV+LGRTF
Sbjct: 176 DISTGFVSAFLLIFFSELGDKTFFIAALLAARNSGAVVFIGTFGALATMTIISVVLGRTF 235

Query: 197 HYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEF 256
           HYVDEILPFRFG+TDLPIDDIAAVCLLVYFGVSTLL+A S++GLK+E+EQKEAE+AVSEF
Sbjct: 236 HYVDEILPFRFGETDLPIDDIAAVCLLVYFGVSTLLEANSSNGLKAEEEQKEAEIAVSEF 295

Query: 257 SGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLL 316
           SGNGAGI+++AST+ISTF LVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGH VATLL
Sbjct: 296 SGNGAGILSSASTVISTFLLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLL 355

Query: 317 AVLGGSLLGTFLSEKV 332
           AVLGGSLLGTFLSEKV
Sbjct: 356 AVLGGSLLGTFLSEKV 371

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452426|ref|XP_004143960.1| PREDICTED: GDT1-like protein 1, chloroplastic-like, partial [Cucumis sativus]

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 211/321 (65%), Positives = 246/321 (76%), Gaps = 23/321 (7%)

Query: 34  FPFNSLCKNQTSTS---KKLSLRNPYLNFSRELCRDPGASCE--NRNDVDCKNCKMTRES 88
           + F+S C+  T+     +K  + + Y +  +E C    +S E   R+     NC+   + 
Sbjct: 1   YRFSSCCRTATTKPWYWRKTEVVSKYYD-HQEPCHHDYSSREVSTRSITILDNCRAPEKP 59

Query: 89  VHNLANDSGL-----------------IKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPF 131
           +   ++  G+                 +KF++  G   LQ SQ A+A  D A+GLQS P 
Sbjct: 60  LAKYSSAEGIHENTDNQKSSSIFSSSFLKFMLLSGFFILQDSQHALAGSDVATGLQSVPL 119

Query: 132 LGDLGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVI 191
           LGDLGDIS GFASAFLLIFFSELGDKTFFIAALLAARNSAATVF GTFGAL AMT+ISV+
Sbjct: 120 LGDLGDISTGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALGAMTIISVV 179

Query: 192 LGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAEL 251
           LGRTFHYVDEILPFR G +DLP+DDIAAVCLLVYFGV+TLLDA+S+DGLK+EDEQKEAEL
Sbjct: 180 LGRTFHYVDEILPFRLGDSDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAEL 239

Query: 252 AVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHV 311
           AVS+FSGNGAGI+AAAST++STF LVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGH 
Sbjct: 240 AVSKFSGNGAGILAAASTVVSTFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHG 299

Query: 312 VATLLAVLGGSLLGTFLSEKV 332
           VATLLAVLGGSLLGTFLSEK+
Sbjct: 300 VATLLAVLGGSLLGTFLSEKI 320

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426088|ref|XP_002272191.1| PREDICTED: GDT1-like protein 1, chloroplastic [Vitis vinifera]

 Score =  369 bits (947), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 201/236 (85%), Positives = 218/236 (92%)

Query: 97  GLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGD 156
           GL+KF++ FG LTLQ SQ AVA  DFASGLQ   +LGDLGDIS GF SAFLLIFFSELGD
Sbjct: 3   GLLKFMLVFGFLTLQDSQQAVAGSDFASGLQLNSYLGDLGDISTGFVSAFLLIFFSELGD 62

Query: 157 KTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDD 216
           KTFFIAALLAARNS A VF GTFGALA MT+ISV+LGRTFHYVDEILPFRFG+TDLPIDD
Sbjct: 63  KTFFIAALLAARNSGAVVFIGTFGALATMTIISVVLGRTFHYVDEILPFRFGETDLPIDD 122

Query: 217 IAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAASTIISTFTL 276
           IAAVCLLVYFGVSTLL+A S++GLK+E+EQKEAE+AVSEFSGNGAGI+++AST+ISTF L
Sbjct: 123 IAAVCLLVYFGVSTLLEANSSNGLKAEEEQKEAEIAVSEFSGNGAGILSSASTVISTFLL 182

Query: 277 VFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKV 332
           VFVAEWGDKSFFSTIALAAASSPLGVIGGALAGH VATLLAVLGGSLLGTFLSEKV
Sbjct: 183 VFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLGTFLSEKV 238

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806660|ref|NP_001241025.1| uncharacterized protein LOC100809618 [Glycine max] gi|255636411|gb|ACU18544.1| unknown [Glycine max]

 Score =  365 bits (936), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 204/303 (67%), Positives = 235/303 (77%), Gaps = 21/303 (6%)

Query: 43  QTSTSKKLSLRNPYLNFSRELCRDPGASCENRND-----VDCKNCK--MTR---ESVHNL 92
           + S +K+L  ++     S+   + P    +N N+         NCK  + R    S H  
Sbjct: 31  RISNTKRL--QSSTFALSQNETKFPTQPYKNSNNSSQSLAHISNCKFPLARPLVSSSHPA 88

Query: 93  ANDSG--LIKFVMFFGLLTLQGSQTAVAAV-DFASGLQSFPFLGDLGDISRGFASAFLLI 149
           + +S   L+  ++ F  LTLQ S  A+AA  DF++        GD+GD+S GFASAFLLI
Sbjct: 89  STNSSTKLLNSMLLFAFLTLQPSYPALAASSDFST------IFGDIGDLSTGFASAFLLI 142

Query: 150 FFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQ 209
           FFSELGDKTFFIAALLAARNSA  VF GTFGALAAMT+ISV+LGRTFHYVDEILPFRFG+
Sbjct: 143 FFSELGDKTFFIAALLAARNSAGVVFIGTFGALAAMTLISVVLGRTFHYVDEILPFRFGE 202

Query: 210 TDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAAST 269
           TDLPIDDIAAVCLLVYFGVSTLLDA+S+DG KS++EQKEAELAVSEFSGNGAGI++AAST
Sbjct: 203 TDLPIDDIAAVCLLVYFGVSTLLDASSSDGQKSDEEQKEAELAVSEFSGNGAGILSAAST 262

Query: 270 IISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLS 329
           + STF LVFVAEWGDKSFFSTIALAAASSPLGVI GALAGH VATLLAVLGGSLLGT+LS
Sbjct: 263 VASTFLLVFVAEWGDKSFFSTIALAAASSPLGVIAGALAGHGVATLLAVLGGSLLGTYLS 322

Query: 330 EKV 332
           EKV
Sbjct: 323 EKV 325

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357481519|ref|XP_003611045.1| Transmembrane protein [Medicago truncatula] gi|355512380|gb|AES94003.1| Transmembrane protein [Medicago truncatula]

 Score =  351 bits (900), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 206/321 (64%), Positives = 241/321 (75%), Gaps = 24/321 (7%)

Query: 15  SLPSSASYPKASKSCGSKL---FPFNSLCKNQTSTSKKLSLRNPYLNFSRELCRDPGASC 71
           SL SS+ +P  +  C  KL   F F ++ ++ T              F R    D  +  
Sbjct: 82  SLISSSIFPPPTPRCNLKLPPRFQFTNIFRSTT-------------GFVRASEDD--SVA 126

Query: 72  ENRNDVDCKNCKMTRESVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPF 131
           EN +      C++  ++V +      ++KF++F     LQ +  AVAA DFA+GL S P 
Sbjct: 127 ENSD----SQCQLATQNVSSDDASMTVLKFMLFSAFFALQDAFPAVAASDFATGLNSIPI 182

Query: 132 LGDLGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVI 191
            GD+GD+S GFASAFLLIFFSELGDKTFFIAALLAARNSA+ VF GTFGALAAMTVISV 
Sbjct: 183 FGDVGDLSTGFASAFLLIFFSELGDKTFFIAALLAARNSASVVFVGTFGALAAMTVISVA 242

Query: 192 LGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAEL 251
           LGRTFHYVDE+LPFRFG+TDLPIDDIAAVCLLVYFGVSTLLDA+S+D  KS+DEQKEAEL
Sbjct: 243 LGRTFHYVDELLPFRFGETDLPIDDIAAVCLLVYFGVSTLLDASSSDSQKSDDEQKEAEL 302

Query: 252 AVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHV 311
           AVS+FSG+GAGI+AAASTI+STF LVFVAEWGDKSFFSTI    +SSPLGVI G+LAGH 
Sbjct: 303 AVSDFSGDGAGILAAASTIVSTFLLVFVAEWGDKSFFSTI--GESSSPLGVIAGSLAGHG 360

Query: 312 VATLLAVLGGSLLGTFLSEKV 332
           VATL+AVLGGSLLGTFLSEKV
Sbjct: 361 VATLIAVLGGSLLGTFLSEKV 381

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356540420|ref|XP_003538687.1| PREDICTED: LOW QUALITY PROTEIN: GDT1-like protein 1, chloroplastic-like, partial [Glycine max]

 Score =  344 bits (883), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 196/302 (64%), Positives = 224/302 (74%), Gaps = 27/302 (8%)

Query: 51  SLRNPYLNFSRELCRDPGASCENRND-----VDCKNCKMTRE-------------SVHNL 92
           +LR      SR   + P  +  N N+         N K +               ++ NL
Sbjct: 5   TLRTSTFATSRNETKFPTQAYRNSNNSPGSLAHISNWKFSLPPPPPPPLVSSSAPAITNL 64

Query: 93  ANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFS 152
           +    L+ F++ FG LTLQ S  A+A+    S +      GD+GD+S GFASAFLLIFFS
Sbjct: 65  STK--LLNFMLLFGFLTLQDSYPALASSSDISTI-----FGDIGDLSTGFASAFLLIFFS 117

Query: 153 ELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDL 212
           ELGDKTFFIAALLAARNSA  VF GTFGALAAMT+ISV+LGRTFHYVDEILPFRF +TDL
Sbjct: 118 ELGDKTFFIAALLAARNSAGVVFIGTFGALAAMTLISVVLGRTFHYVDEILPFRFXETDL 177

Query: 213 PIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEA--ELAVSEFSGNGAGIIAAASTI 270
           PIDDIAAV LLVYFGVSTLLDA+S+D  KS++EQKE   ELAVS+FSGNGAGI++AAST+
Sbjct: 178 PIDDIAAVGLLVYFGVSTLLDASSSDSQKSDEEQKEIIFELAVSDFSGNGAGILSAASTV 237

Query: 271 ISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSE 330
            STF LVFVAEWGDKSFFSTIALAAASSPLGVI GALAGH VATLLAVLGGSLLGT+LSE
Sbjct: 238 ASTFLLVFVAEWGDKSFFSTIALAAASSPLGVIAGALAGHGVATLLAVLGGSLLGTYLSE 297

Query: 331 KV 332
           KV
Sbjct: 298 KV 299

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297836959|ref|XP_002886361.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297332202|gb|EFH62620.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  342 bits (876), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 208/302 (68%), Positives = 229/302 (75%), Gaps = 24/302 (7%)

Query: 51  SLRNPYLNFSR---ELCRDPGAS----CENRNDVDCKNCKM-TRESVHNL--ANDSG--- 97
           S RN Y  FSR   +L R+        C  RND  C   K  + E++ NL    DS    
Sbjct: 47  SFRNQY--FSRCLTQLRRNESQQLEFRCFRRNDSACYLEKAESEENIRNLDLLVDSSVAH 104

Query: 98  -------LIKFVMFFGLLTLQGSQTAVAAVDFASGLQSF-PFLGDLGDISRGFASAFLLI 149
                  L+KF+   G + L G+  A AA   A+G QS    LGDLGDIS GFASAFLLI
Sbjct: 105 SRRETLRLLKFLAVSGSVALLGNDPAFAASSIANGTQSLVSSLGDLGDISSGFASAFLLI 164

Query: 150 FFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQ 209
           FFSELGDKTFFIAALLAARNSAATVF GTFGAL  MT+ISV+LGRTFHY DE+LPFRFG+
Sbjct: 165 FFSELGDKTFFIAALLAARNSAATVFVGTFGALGIMTIISVVLGRTFHYADEVLPFRFGE 224

Query: 210 TDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAAST 269
           TDLPIDDIAAVCLLVYFGVSTLLDA S +G K+++EQKEAELAVSE SG+GAGI+AAA+T
Sbjct: 225 TDLPIDDIAAVCLLVYFGVSTLLDAVSDEG-KADEEQKEAELAVSELSGSGAGIVAAANT 283

Query: 270 IISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLS 329
           IISTF LVFVAEWGDKSFFSTIALAAASSPLGVI GALAGH  ATLLAVLGGSLLG FLS
Sbjct: 284 IISTFALVFVAEWGDKSFFSTIALAAASSPLGVIAGALAGHGAATLLAVLGGSLLGNFLS 343

Query: 330 EK 331
           EK
Sbjct: 344 EK 345

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18407980|ref|NP_564825.1| uncharacterized protein [Arabidopsis thaliana] gi|308191633|sp|Q94AX5.2|GDT11_ARATH RecName: Full=GDT1-like protein 1, chloroplastic; Flags: Precursor gi|332196081|gb|AEE34202.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  337 bits (865), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 201/311 (64%), Positives = 222/311 (71%), Gaps = 20/311 (6%)

Query: 40  CKNQTSTSKKLSLRNPYL-----NFSRELCRDPGASCENRNDVDC-----------KNCK 83
           C +        S+RN Y         R   +  G  C  RND  C           +N  
Sbjct: 38  CVSAYPIPIGFSVRNQYFSRCLTQLRRNESQQLGFRCFQRNDAACYLEKAESEEHDRNLD 97

Query: 84  MTRES--VHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSF-PFLGDLGDISR 140
           +  ES   H+      ++ F+   G + L G+  A AA    +  QS     GDLGDIS 
Sbjct: 98  VLVESSIAHSRREIQRVLMFLAVSGSVALLGTDPAFAASSIPNVTQSLVTSFGDLGDISS 157

Query: 141 GFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVD 200
           GFASAFLLIFFSELGDKTFFIAALLAARNSAATVF GTFGAL  MT+ISV+LGRTFHYVD
Sbjct: 158 GFASAFLLIFFSELGDKTFFIAALLAARNSAATVFVGTFGALGIMTIISVVLGRTFHYVD 217

Query: 201 EILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNG 260
           E+LPFRFG TDLPIDDIAAVCLLVYFGVSTLLDA S +G K+++EQKEAELAVSE SGNG
Sbjct: 218 EVLPFRFGGTDLPIDDIAAVCLLVYFGVSTLLDAVSDEG-KADEEQKEAELAVSELSGNG 276

Query: 261 AGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLG 320
           AGI+AAA+TIISTF LVFVAEWGDKSFFSTIALAAASSPLGVI GALAGH  ATLLAVLG
Sbjct: 277 AGIVAAANTIISTFALVFVAEWGDKSFFSTIALAAASSPLGVIAGALAGHGAATLLAVLG 336

Query: 321 GSLLGTFLSEK 331
           GSLLG FLSEK
Sbjct: 337 GSLLGNFLSEK 347

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15010676|gb|AAK73997.1| At1g64150/F22C12_10 [Arabidopsis thaliana] gi|23505909|gb|AAN28814.1| At1g64150/F22C12_10 [Arabidopsis thaliana]

 Score =  335 bits (859), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 203/311 (65%), Positives = 226/311 (72%), Gaps = 22/311 (7%)

Query: 35  PFNSLCKNQTSTSKKLSLRNPYLNFSRELCRDPGASCENRNDVDC-----------KNCK 83
           P     +NQ+ +     LR    N S++L    G  C  RND  C           +N  
Sbjct: 45  PIGFSVRNQSFSRCLTQLRR---NESQQL----GFRCFQRNDAACYLEKAESEEHDRNLD 97

Query: 84  MTRES--VHNLANDSGLIKFVMFFGLLTLQGSQTAVAAVDFASGLQSF-PFLGDLGDISR 140
           +  ES   H+      ++ F+   G + L G+  A AA    +  QS     GDLGDIS 
Sbjct: 98  VLVESSIAHSRREIQRVLMFLAVSGSVALLGTDPAFAASSIPNVTQSLVTSFGDLGDISS 157

Query: 141 GFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVD 200
           GFASAFLLIFFSELGDKTFFIAALLAARNSAATVF GTFGAL  MT+ISV+LGRTFHYVD
Sbjct: 158 GFASAFLLIFFSELGDKTFFIAALLAARNSAATVFVGTFGALGIMTIISVVLGRTFHYVD 217

Query: 201 EILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNG 260
           E+LPFRFG TDLPIDDIAAVCLLVYFGVSTLLDA S +G K+++EQKEAELAVSE SGNG
Sbjct: 218 EVLPFRFGGTDLPIDDIAAVCLLVYFGVSTLLDAVSDEG-KADEEQKEAELAVSELSGNG 276

Query: 261 AGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLG 320
           AGI+AAA+TIISTF LVFVAEWGDKSFFSTIALAAASSPLGVI GALAGH  ATLLAVLG
Sbjct: 277 AGIVAAANTIISTFALVFVAEWGDKSFFSTIALAAASSPLGVIAGALAGHGAATLLAVLG 336

Query: 321 GSLLGTFLSEK 331
           GSLLG FLSEK
Sbjct: 337 GSLLGNFLSEK 347

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	340
TAIR|locus:2024628	370	AT1G64150 [Arabidopsis thalian	0.773	0.710	0.618	3.4e-77
TAIR|locus:2140872	359	AT4G13590 [Arabidopsis thalian	0.544	0.515	0.422	1.7e-34
WB|WBGene00021847	297	Y54F10AL.1 [Caenorhabditis ele	0.535	0.612	0.324	4e-19
TAIR|locus:2183632	293	AT5G36290 "AT5G36290" [Arabido	0.523	0.607	0.340	8.3e-19
TAIR|locus:2026879	228	AT1G68650 "AT1G68650" [Arabido	0.573	0.855	0.302	4.1e-17
UNIPROTKB|F1P1B3	254	TMEM165 "Uncharacterized prote	0.541	0.724	0.310	9.8e-16
TAIR|locus:2031195	230	AT1G25520 [Arabidopsis thalian	0.573	0.847	0.290	9.8e-16
POMBASE|SPAC17G8.08c	287	SPAC17G8.08c "human TMEM165 ho	0.155	0.184	0.490	1.7e-15
UNIPROTKB|B4DHW1	261	TMEM165 "cDNA FLJ60544, highly	0.541	0.704	0.324	3e-15
FB|FBgn0260659	503	CG42542 [Drosophila melanogast	0.164	0.111	0.5	3.7e-15

TAIR|locus:2024628 AT1G64150 [Arabidopsis thaliana (taxid:3702)]

 Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
 Identities = 172/278 (61%), Positives = 188/278 (67%)

Query:    68 GASCENRNDVDC-----------KNCKMTRES--VHNLANDSGLIKFVMFFGLLTLQGSQ 114
             G  C  RND  C           +N  +  ES   H+      ++ F+   G + L G+ 
Sbjct:    71 GFRCFQRNDAACYLEKAESEEHDRNLDVLVESSIAHSRREIQRVLMFLAVSGSVALLGTD 130

Query:   115 TAVAAVDFASGLQSF-PFLGDLGDISRGFASAFLLIFFSELGDKTFFIXXXXXXXXXXXT 173
              A AA    +  QS     GDLGDIS GFASAFLLIFFSELGDKTFFI           T
Sbjct:   131 PAFAASSIPNVTQSLVTSFGDLGDISSGFASAFLLIFFSELGDKTFFIAALLAARNSAAT 190

Query:   174 VFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLD 233
             VF GTFGAL  MT+ISV+LGRTFHYVDE+LPFRFG TDLPIDDIAAVCLLVYFGVSTLLD
Sbjct:   191 VFVGTFGALGIMTIISVVLGRTFHYVDEVLPFRFGGTDLPIDDIAAVCLLVYFGVSTLLD 250

Query:   234 AASTDGLKSEDEQKEAELAVSEFSGNXXXXXXXXXXXXXXFTLVFVAEWGDKSFFSTIAL 293
             A S +G K+++EQKEAELAVSE SGN              F LVFVAEWGDKSFFSTIAL
Sbjct:   251 AVSDEG-KADEEQKEAELAVSELSGNGAGIVAAANTIISTFALVFVAEWGDKSFFSTIAL 309

Query:   294 AAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEK 331
             AAASSPLGVI GALAGH  ATLLAVLGGSLLG FLSEK
Sbjct:   310 AAASSPLGVIAGALAGHGAATLLAVLGGSLLGNFLSEK 347

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0042631 "cellular response to water deprivation" evidence=RCA

TAIR|locus:2140872 AT4G13590 [Arabidopsis thaliana (taxid:3702)]

 Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
 Identities = 85/201 (42%), Positives = 121/201 (60%)

Query:   141 GFASAFLLIFFSELGDKTFFIXXXXXXXXXXXTVFAGTFGALAAMTVISVILGRTFHYVD 200
             GF +AF LIF SE+GDKTFFI            V  G+ GAL+ MT++SV++G+ F  V 
Sbjct:   145 GFTAAFSLIFVSEIGDKTFFIAALLAMQYEKTLVLLGSMGALSLMTILSVVIGKIFQSV- 203

Query:   201 EILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSED---------EQKEAEL 251
                P +F QT LPI + AA+ LL++FG+ ++ DA     +++++         E  EAE 
Sbjct:   204 ---PAQF-QTTLPIGEYAAIALLMFFGLKSIKDAWDLPPVEAKNGEETGIELGEYSEAEE 259

Query:   252 AVSEFSGNXXXXXXXXXXXXXXFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHV 311
              V E +                F+LVF AEWGD+S  +T+AL AA SPLGV  GA+AGH+
Sbjct:   260 LVKEKASKKLTNPLEILWKS--FSLVFFAEWGDRSMLATVALGAAQSPLGVASGAIAGHL 317

Query:   312 VATLLAVLGGSLLGTFLSEKV 332
             VAT+LA++GG+ L  ++SEK+
Sbjct:   318 VATVLAIMGGAFLANYISEKL 338

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016020 "membrane" evidence=IEA

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

WB|WBGene00021847 Y54F10AL.1 [Caenorhabditis elegans (taxid:6239)]

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 70/216 (32%), Positives = 102/216 (47%)

Query:   137 DIS--RGFASAFLLIFFSELGDKTFFIXXXXXXXXXXXTVFAGTFGALAAMTVISVILGR 194
             DIS   GF ++F +I  SELGDKT+FI           TVF+G  GALA MTV+S  LG 
Sbjct:    62 DISFYHGFLASFSVIVVSELGDKTWFIAVIMSMRHSRLTVFSGAMGALALMTVLSACLG- 120

Query:   195 TFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDA---ASTDGLKSEDE------ 245
                ++ +++P         +    +  L   FG+  L +    +  +G +  +E      
Sbjct:   121 ---WITQVIP-------RAVTYYLSTALFALFGLKMLHEGWTMSPNEGQEGYEEAQAEVA 170

Query:   246 QKEAELAVSEFS---GNXXXXXXXXXXXXXXFT---------LVFVAEWGDKSFFSTIAL 293
             ++E EL   +F    G               FT         L FVAEWGD+S  +TI L
Sbjct:   171 KREGELDAGKFEMLEGGGGVASQSETRKIFLFTSRIFIEAFSLTFVAEWGDRSQLTTIIL 230

Query:   294 AAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLS 329
              A  +  GVIGG + GH + T +AV+GG ++   +S
Sbjct:   231 GARENIAGVIGGGILGHALCTGIAVIGGKIVAQRIS 266

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2183632 AT5G36290 "AT5G36290" [Arabidopsis thaliana (taxid:3702)]

 Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 66/194 (34%), Positives = 94/194 (48%)

Query:   144 SAFLLIFFSELGDKTFFIXXXXXXXXXXXTVFAGTFGALAAMTVISVILGRTFHYVDEIL 203
             S+F +I  +E+GD+TF I           TV +G   AL  MT++S  LGR       I+
Sbjct:    87 SSFSMILVTEIGDETFIIAALMAMRHPKATVLSGALSALFVMTILSTGLGR-------IV 139

Query:   204 PFRFGQTDLPIDDIAAVCLLVYFGVSTLLDA-ASTDGLKSED-EQKEAELAVSEFSGNXX 261
             P    +      + AA  L  +FG+  L  A  STD   ++  E +E E  +    G   
Sbjct:   140 PNLISRKHT---NSAATVLYAFFGLRLLYIAWRSTDSKSNQKKEMEEVEEKLESGQGKTP 196

Query:   262 XXXXXXXXXX----XXFTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLA 317
                             F L F+AEWGD+S  +TIALA   + +GV  GA  GH V T LA
Sbjct:   197 FRRLFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAIGVAIGASIGHTVCTSLA 256

Query:   318 VLGGSLLGTFLSEK 331
             V+GGS+L + +S++
Sbjct:   257 VVGGSMLASRISQR 270

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006007 "glucose catabolic process" evidence=RCA

GO:0030244 "cellulose biosynthetic process" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:2026879 AT1G68650 "AT1G68650" [Arabidopsis thaliana (taxid:3702)]

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 63/208 (30%), Positives = 92/208 (44%)

Query:   135 LGDISRGFASAFLLIFFSELGDKTFFIXXXXXXXXXXXTVFAGTFGALAAMTVISVILG- 193
             +G + +GF  +  + F SE+GDKTFF             V AG   AL  MT++S  LG 
Sbjct:     1 MGSLLQGFTKSLAMTFLSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGW 60

Query:   194 -------RTF-HYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDE 245
                    R + H++   L F FG   L               V   LD+   D  K+ D+
Sbjct:    61 AAPNLISRKWTHHITTFLFFGFGLWSLWDGFKEGGGSEELAEVEAELDS---DLKKTNDQ 117

Query:   246 QKEAELAVSEFSGNXXXXXXXXX-XXXXXFTLVFVAEWGDKSFFSTIALAAASSPLGVIG 304
              K +++   +                   F++ F  EWGDKS  +TI LAA  +PLGV+ 
Sbjct:   118 SKNSKIEDEQKKQKRPFLTAFFSPIFLKAFSINFFGEWGDKSQLATIGLAADENPLGVVL 177

Query:   305 GALAGHVVATLLAVLGGSLLGTFLSEKV 332
             G +    + T  AVLGG  L + +SE++
Sbjct:   178 GGIVAQTLCTTAAVLGGKSLASQISERI 205

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|F1P1B3 TMEM165 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
 Identities = 68/219 (31%), Positives = 97/219 (44%)

Query:   134 DLGDISRGFASAFLLIFFSELGDKTFFIXXXXXXXXXXXTVFAGTFGALAAMTVISVILG 193
             +LG I   F +A  +I  SELGDKTFFI           TV AG   AL  MT +SV+ G
Sbjct:    20 NLGFI-HAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFG 78

Query:   194 RTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTL---LDAASTDG------LKSED 244
                 Y   ++P  +           +  L   FG+  L   L  +  +G      +++E 
Sbjct:    79 ----YATTVIPRVYTY-------YVSTALFAIFGIRMLREGLKMSPDEGQEELEEVQAEI 127

Query:   245 EQKEAELAVSEF---SGNXXXXXXXXX-----------XXXXXFTLVFVAEWGDKSFFST 290
             ++K+ EL  ++     G+                         FTL F+AEWGD+S  +T
Sbjct:   128 KKKDEELQRTKLLNGPGDVETGSTATIPQKKWLHFISPIFVQAFTLTFLAEWGDRSQLTT 187

Query:   291 IALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLS 329
             I LAA   P GV  G   GH + T LAV+GG ++   +S
Sbjct:   188 IVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKIS 226

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2031195 AT1G25520 [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
 Identities = 61/210 (29%), Positives = 90/210 (42%)

Query:   135 LGDISRGFASAFLLIFFSELGDKTFFIXXXXXXXXXXXTVFAGTFGALAAMTVISVILG- 193
             +  + +GF  +  + F SE+GDKTFF             V AG   AL  MT++S  LG 
Sbjct:     1 MSSVLQGFTKSLAMTFVSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGW 60

Query:   194 -------RTF-HYVDEILPFRFGQTDLPIDDI--AAVCLLVYFGVSTLLDA-ASTDGLKS 242
                    R + H++  +L F FG   L  D              V   LDA    +G   
Sbjct:    61 AAPNLISRKWTHHITTLLFFGFGLWSL-WDGFKEGGGGSEELAEVEAELDADLKANGKSP 119

Query:   243 EDEQKEAELAVSEFSGNXXXXXXXXXXXXXXFTLVFVAEWGDKSFFSTIALAAASSPLGV 302
             +D  K  +   ++                  F++ F  EWGDKS  +TI LAA  +P GV
Sbjct:   120 KDSSKRED--ENKKQNRAFLTQFFSPIFLKAFSINFFGEWGDKSQLATIGLAADENPFGV 177

Query:   303 IGGALAGHVVATLLAVLGGSLLGTFLSEKV 332
             + G +    + T  AV+GG  L + +SE++
Sbjct:   178 VLGGVVAQFLCTTAAVIGGKSLASQISERI 207

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0080167 "response to karrikin" evidence=IEP

POMBASE|SPAC17G8.08c SPAC17G8.08c "human TMEM165 homolog" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 132 (51.5 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
 Identities = 26/53 (49%), Positives = 34/53 (64%)

Query:   274 FTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGT 326
             F L FV+EWGD+S  +TIA+AA+ +  GV  GA  GH   T LAV+ G  + T
Sbjct:   207 FALTFVSEWGDRSQIATIAMAASDNVYGVFMGANVGHACCTALAVISGKYIST 259

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|B4DHW1 TMEM165 "cDNA FLJ60544, highly similar to Transmembrane protein TPARL" [Homo sapiens (taxid:9606)]

 Score = 193 (73.0 bits), Expect = 3.0e-15, P = 3.0e-15
 Identities = 71/219 (32%), Positives = 95/219 (43%)

Query:   134 DLGDISRGFASAFLLIFFSELGDKTFFIXXXXXXXXXXXTVFAGTFGALAAMTVISVILG 193
             +LG I   F +A  +I  SELGDKTFFI           TV AG   AL  MT +SV+ G
Sbjct:    27 NLGFI-HAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFG 85

Query:   194 RTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAA--STDGLKSEDEQKEAEL 251
                 Y   ++P  +         ++ V L   FG+  L +    S D  + E E+ +AEL
Sbjct:    86 ----YATTVIPRVYTYY------VSTV-LFAIFGIRMLREGLKMSPDEGQEELEEVQAEL 134

Query:   252 AVS--EFS--------GNXXXXXXXXX-----------XXXXXFTLVFVAEWGDKSFFST 290
                  EF         G+                          TL F+AEWGD+S  +T
Sbjct:   135 KKKDEEFQRTKLLNGPGDVETGTSITVPQKKWLHFISPIFVQALTLTFLAEWGDRSQLTT 194

Query:   291 IALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLS 329
             I LAA   P GV  G   GH + T LAV+GG ++   +S
Sbjct:   195 IVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKIS 233

GO:0016021 "integral to membrane" evidence=IEA

FB|FBgn0260659 CG42542 [Drosophila melanogaster (taxid:7227)]

 Score = 146 (56.5 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
 Identities = 28/56 (50%), Positives = 39/56 (69%)

Query:   274 FTLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLS 329
             FT+ F+AEWGD+S  +TI LAA+    GVI G + GH + T LAV+GG L+ + +S
Sbjct:   421 FTMTFLAEWGDRSQLTTIILAASKDVYGVIAGGIIGHCICTGLAVIGGRLVASKIS 476

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
B8AAM2	GDT11_ORYSI	No assigned EC number	0.7610	0.6558	0.6539	N/A	no
Q5NAY7	GDT11_ORYSJ	No assigned EC number	0.7566	0.6558	0.6539	yes	no
Q94AX5	GDT11_ARATH	No assigned EC number	0.6463	0.8558	0.7864	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	340
COG2119	190	COG2119, COG2119, Predicted membrane protein [Func	3e-28
pfam01169	78	pfam01169, UPF0016, Uncharacterized protein family	1e-15
pfam01169	78	pfam01169, UPF0016, Uncharacterized protein family	2e-13

>gnl|CDD|225030 COG2119, COG2119, Predicted membrane protein [Function unknown]

 Score =  107 bits (270), Expect = 3e-28
 Identities = 63/191 (32%), Positives = 90/191 (47%), Gaps = 31/191 (16%)

Query: 142 FASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDE 201
              + L++  +E+GDKT  IA LLA R     VFAG   AL AM  ++V++G   H    
Sbjct: 4   LLVSLLMVALAEIGDKTQLIAMLLAMRYRRWPVFAGIAIALFAMHALAVLVG---HAAAS 60

Query: 202 ILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGA 261
           +LP R           A+  L + F V  L++    D    E+ Q  +   V        
Sbjct: 61  LLPER-------PLAWASGVLFLAFAVWMLIE----DKEDDEEAQAASPRGV-------- 101

Query: 262 GIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAAS-SPLGVIGGALAGHVVATLLAVLG 320
                    ++TF   F+AE GDK+  +TIALAA   SP  V  G   G ++A++LAVL 
Sbjct: 102 --------FVTTFITFFLAELGDKTQIATIALAADYHSPWAVFAGTTLGMILASVLAVLL 153

Query: 321 GSLLGTFLSEK 331
           G L+   L E+
Sbjct: 154 GKLIAGKLPER 164

Length = 190

>gnl|CDD|216341 pfam01169, UPF0016, Uncharacterized protein family UPF0016

 Score = 70.2 bits (173), Expect = 1e-15
 Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 2/65 (3%)

Query: 270 IISTFTLVFVAEWGDKSFFSTIALAA--ASSPLGVIGGALAGHVVATLLAVLGGSLLGTF 327
            +++F L+F+AE GDK+  +TIALAA  + SP  V  GA     +ATLLAVL G  L T 
Sbjct: 1   FLTSFLLIFLAELGDKTQLATIALAARYSRSPWAVFLGATLALALATLLAVLLGRWLATL 60

Query: 328 LSEKV 332
           L  +V
Sbjct: 61  LPPRV 65

This family contains integral membrane proteins of unknown function. Most members of the family contain two copies of a region that contains an EXGD motif. Each of these regions contains three predicted transmembrane regions. Length = 78

>gnl|CDD|216341 pfam01169, UPF0016, Uncharacterized protein family UPF0016

 Score = 64.4 bits (158), Expect = 2e-13
 Identities = 28/57 (49%), Positives = 36/57 (63%), Gaps = 2/57 (3%)

Query: 142 FASAFLLIFFSELGDKTFFIAALLAARNSAAT--VFAGTFGALAAMTVISVILGRTF 196
           F ++FLLIF +ELGDKT      LAAR S +   VF G   ALA  T+++V+LGR  
Sbjct: 1   FLTSFLLIFLAELGDKTQLATIALAARYSRSPWAVFLGATLALALATLLAVLLGRWL 57

This family contains integral membrane proteins of unknown function. Most members of the family contain two copies of a region that contains an EXGD motif. Each of these regions contains three predicted transmembrane regions. Length = 78

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	340
KOG2881	294	consensus Predicted membrane protein [Function unk	100.0
COG2119	190	Predicted membrane protein [Function unknown]	100.0
COG2119	190	Predicted membrane protein [Function unknown]	99.9
PF01169	78	UPF0016: Uncharacterized protein family UPF0016; I	99.85
PF01169	78	UPF0016: Uncharacterized protein family UPF0016; I	99.82
KOG2881	294	consensus Predicted membrane protein [Function unk	99.81
COG4280	236	Predicted membrane protein [Function unknown]	97.19
TIGR02840	206	spore_YtaF putative sporulation protein YtaF. This	96.47
PRK11469	188	hypothetical protein; Provisional	95.19
PF01810	191	LysE: LysE type translocator; InterPro: IPR001123	95.02
PF03596	191	Cad: Cadmium resistance transporter; InterPro: IPR	91.37
COG1971	190	Predicted membrane protein [Function unknown]	91.1
TIGR00948	177	2a75 L-lysine exporter.	89.19
PF03741	183	TerC: Integral membrane protein TerC family; Inter	89.05
TIGR00145	283	FTR1 family protein. A characterized member from y	88.73
PF01914	203	MarC: MarC family integral membrane protein; Inter	88.09
COG0730	258	Predicted permeases [General function prediction o	86.69
PF03239	306	FTR1: Iron permease FTR1 family; InterPro: IPR0049	84.42
PF01810	191	LysE: LysE type translocator; InterPro: IPR001123	82.2
COG1971	190	Predicted membrane protein [Function unknown]	82.18
PF01925	240	TauE: Sulfite exporter TauE/SafE; InterPro: IPR002	81.05
PRK10621	266	hypothetical protein; Provisional	80.71

>KOG2881 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=4.4e-47  Score=357.55  Aligned_cols=191  Identities=41%  Similarity=0.620  Sum_probs=162.2

Q ss_pred             chhHHHHHHHHHHHHHhcCchHHHHHHHHHhccCCcEeehhHHHHHHHHHHHHHHHccccccccccCCccccCCCcchhH
Q 019473          137 DISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDD  216 (340)
Q Consensus       137 ~~~~~f~~aF~liFLAElGDKTQLati~LAar~~~~~Vf~Ga~lAl~l~t~LaV~~G~~~~~l~~~Lp~r~~~~~~~v~~  216 (340)
                      ++..+|..++.|||++|+||||+|++++|||||+|..||.|++.|+++||+|++++|+.   .+..+|+++       ++
T Consensus        64 s~~~~f~~SiSmI~vsEiGDKTFfiAAlmAmr~~R~~Vf~Ga~~AL~lMTiLS~~lG~a---ap~lipr~~-------T~  133 (294)
T KOG2881|consen   64 SFLQGFTASISMIFVSEIGDKTFFIAALMAMRYPRLTVFSGAMSALALMTILSVLLGWA---APNLIPRKY-------TY  133 (294)
T ss_pred             HHHHHHHHhhheeeeeeccchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHh---hhhhchHHH-------HH
Confidence            57899999999999999999999999999999999999999999999999999999997   457889887       89


Q ss_pred             HHHHHHHHHHHHHHhhhcccCCCCC--chhHHHHHHHhhhhccCC----------Cccch---------hhH-HHHHHHH
Q 019473          217 IAAVCLLVYFGVSTLLDAASTDGLK--SEDEQKEAELAVSEFSGN----------GAGII---------AAA-STIISTF  274 (340)
Q Consensus       217 i~aa~LFl~FG~~~L~~a~~~~~~~--~eeE~~eae~~v~~~~~~----------~~g~~---------~~~-~~f~~aF  274 (340)
                      +++++||++||+|+|+|+|++.+.+  +|-|+.|+|++.++.+.+          ..+..         ..+ +.|+++|
T Consensus       134 ~~~t~LF~iFGlkmL~eg~~~~~~~~~eE~eEVe~el~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~t~ffspifikaF  213 (294)
T KOG2881|consen  134 YLATALFLIFGLKMLKEGWEMSPSEGQEELEEVEAELAKREDELDRLEEGLPGSAETGSQKSKFRRKLTLFFSPIFIKAF  213 (294)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCCccchhhHHHHHHHHHhccchhhhhhhcCCCCCccchhhhhhhHHHHHhccHHHHHHH
Confidence            9999999999999999998754433  333444555543221111          01100         011 4789999


Q ss_pred             HHHHHHHhCChhHHHHHHHhcccCCceeehHHHHHHHHHHHHHHHHHHHhhhcccHhHHhhcc
Q 019473          275 TLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYSNFN  337 (340)
Q Consensus       275 ~l~FLAE~GDKTQLaTiaLAA~~~p~~V~~Ga~lg~~l~t~laVl~G~~l~~~is~r~i~~~~  337 (340)
                      .++|++||||||||+||+|||+.||++|++|+.+||.+||.+||++|+++++|||+|+|..+|
T Consensus       214 sltF~aEwGDRSQlaTI~laA~en~~gV~~G~~iGH~lCT~lAVigGk~lAskIS~rtVt~~g  276 (294)
T KOG2881|consen  214 SLTFLAEWGDRSQLATIALAADENPLGVAIGAIIGHALCTGLAVIGGKYLASKISVRTVTLIG  276 (294)
T ss_pred             HHHHHHHhccHHHHHHHHHhcccCcceeeeccHHHHHHHHHHHHhhhHHHhhhheeEEEEEec
Confidence            999999999999999999999999999999999999999999999999999999999987765

>COG2119 Predicted membrane protein [Function unknown]

Probab=100.00  E-value=1.8e-44  Score=325.55  Aligned_cols=168  Identities=36%  Similarity=0.512  Sum_probs=149.0

Q ss_pred             HHHHHHHHHHHHHhcCchHHHHHHHHHhccCCcEeehhHHHHHHHHHHHHHHHccccccccccCCccccCCCcchhHHHH
Q 019473          140 RGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAA  219 (340)
Q Consensus       140 ~~f~~aF~liFLAElGDKTQLati~LAar~~~~~Vf~Ga~lAl~l~t~LaV~~G~~~~~l~~~Lp~r~~~~~~~v~~i~a  219 (340)
                      +.++.+.++|+++|+||||||++++||+||+|++|+.|+.+|++.||++++++|++   .+..+|+++       .++.+
T Consensus         2 ~~~~~s~~~v~laEiGDKT~lia~llA~r~~~~~v~~g~~~a~~~m~~la~~vG~~---~~~~~~~~~-------~~~~~   71 (190)
T COG2119           2 EALLVSLLMVALAEIGDKTQLIAMLLAMRYRRWPVFAGIAIALFAMHALAVLVGHA---AASLLPERP-------LAWAS   71 (190)
T ss_pred             hhHHHHHHHHHHHHhccHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHH---HhccCchhH-------HHHHH
Confidence            57889999999999999999999999999998889999999999999999999998   577889987       78899


Q ss_pred             HHHHHHHHHHHhhhcccCCCCCchhHHHHHHHhhhhccCCCccchhhHHHHHHHHHHHHHHHhCChhHHHHHHHhcccC-
Q 019473          220 VCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASS-  298 (340)
Q Consensus       220 a~LFl~FG~~~L~~a~~~~~~~~eeE~~eae~~v~~~~~~~~g~~~~~~~f~~aF~l~FLAE~GDKTQLaTiaLAA~~~-  298 (340)
                      +.+|++||+|+++|+.      +++|+.+.      .+        +..+|+++|+++|++||||||||+||+||++++ 
T Consensus        72 ~~~Flafav~~l~edk------~~~~e~~~------~~--------~~~~f~~tfi~~FlaE~GDKTQiATIaLaA~~~~  131 (190)
T COG2119          72 GVLFLAFAVWMLIEDK------EDDEEAQA------AS--------PRGVFVTTFITFFLAELGDKTQIATIALAADYHS  131 (190)
T ss_pred             HHHHHHHHHHHhcccc------cccccccc------cc--------cccHHHHHHHHHHHHHhccHHHHHHHHHhhcCCC
Confidence            9999999999999832      22222110      01        124899999999999999999999999999985 


Q ss_pred             CceeehHHHHHHHHHHHHHHHHHHHhhhcccHhHHhhcc
Q 019473          299 PLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYSNFN  337 (340)
Q Consensus       299 p~~V~~Ga~lg~~l~t~laVl~G~~l~~~is~r~i~~~~  337 (340)
                      ||.|++|+++||++|++++|++|+++++|+|+|.++.++
T Consensus       132 ~~~V~~Gt~lg~~l~s~laVl~G~~ia~ki~~r~l~~~a  170 (190)
T COG2119         132 PWAVFAGTTLGMILASVLAVLLGKLIAGKLPERLLRFIA  170 (190)
T ss_pred             ceeeehhhHHHHHHHHHHHHHHHHHHHccCCHHHHHHHH
Confidence            699999999999999999999999999999999999764

>COG2119 Predicted membrane protein [Function unknown]

Probab=99.90  E-value=7.4e-24  Score=191.98  Aligned_cols=114  Identities=26%  Similarity=0.357  Sum_probs=99.8

Q ss_pred             HHHHHHHHHHHHhcCCcccccccccccCCCCcccCCCCcchhHHHHHHHHHHHHHhcCchHHHHHHHHHhccCCcE-eeh
Q 019473           98 LIKFVMFFGLLTLQGSQTAVAAVDFASGLQSFPFLGDLGDISRGFASAFLLIFFSELGDKTFFIAALLAARNSAAT-VFA  176 (340)
Q Consensus        98 ~~~lFl~FGl~tLr~a~~~~~~sd~~~~~~~~~~~g~~~~~~~~f~~aF~liFLAElGDKTQLati~LAar~~~~~-Vf~  176 (340)
                      ...+|++||+|+++++..+.++.+       .      .+.++.|+++|+++|++|||||||++|++||++|+.++ ||+
T Consensus        71 ~~~~Flafav~~l~edk~~~~e~~-------~------~~~~~~f~~tfi~~FlaE~GDKTQiATIaLaA~~~~~~~V~~  137 (190)
T COG2119          71 SGVLFLAFAVWMLIEDKEDDEEAQ-------A------ASPRGVFVTTFITFFLAELGDKTQIATIALAADYHSPWAVFA  137 (190)
T ss_pred             HHHHHHHHHHHHhccccccccccc-------c------cccccHHHHHHHHHHHHHhccHHHHHHHHHhhcCCCceeeeh
Confidence            358999999999999865444322       1      12346999999999999999999999999999999854 999


Q ss_pred             hHHHHHHHHHHHHHHHccccccccccCCccccCCCcchhHHHHHHHHHHHHHHHhhhc
Q 019473          177 GTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDA  234 (340)
Q Consensus       177 Ga~lAl~l~t~LaV~~G~~~~~l~~~Lp~r~~~~~~~v~~i~aa~LFl~FG~~~L~~a  234 (340)
                      |+++||+++++++|++|++   +++++|+|.       .+.+++++|++||+..+|+.
T Consensus       138 Gt~lg~~l~s~laVl~G~~---ia~ki~~r~-------l~~~aallFl~fal~~~~~~  185 (190)
T COG2119         138 GTTLGMILASVLAVLLGKL---IAGKLPERL-------LRFIAALLFLIFALVLLWQV  185 (190)
T ss_pred             hhHHHHHHHHHHHHHHHHH---HHccCCHHH-------HHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999997   789999997       78999999999999999974

>PF01169 UPF0016: Uncharacterized protein family UPF0016; InterPro: IPR001727 A number of uncharacterised proteins share regions of similarities

Probab=99.85  E-value=3.8e-22  Score=158.32  Aligned_cols=76  Identities=43%  Similarity=0.602  Sum_probs=70.9

Q ss_pred             HHHHHHHHHHHhcCchHHHHHHHHHhcc--CCcEeehhHHHHHHHHHHHHHHHccccccccccCCccccCCCcchhHHHH
Q 019473          142 FASAFLLIFFSELGDKTFFIAALLAARN--SAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAA  219 (340)
Q Consensus       142 f~~aF~liFLAElGDKTQLati~LAar~--~~~~Vf~Ga~lAl~l~t~LaV~~G~~~~~l~~~Lp~r~~~~~~~v~~i~a  219 (340)
                      |+++|.++|++|||||||++|+.||+||  +++.|++|+++|++++|+++|++|++   +.+++|+++       +++++
T Consensus         1 F~~sf~~iflaE~GDKTQl~t~~La~~~~~~~~~V~~G~~~al~~~~~lav~~G~~---l~~~ip~~~-------i~~~~   70 (78)
T PF01169_consen    1 FLTSFLLIFLAELGDKTQLATIALAARYPRNPWPVFAGATLALALATGLAVLLGSW---LASRIPERY-------IKWVA   70 (78)
T ss_pred             CHHHHHHHHHHHhCcHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHH---HHHHCCHHH-------HHHHH
Confidence            6789999999999999999999999999  45569999999999999999999997   789999998       78999


Q ss_pred             HHHHHHHH
Q 019473          220 VCLLVYFG  227 (340)
Q Consensus       220 a~LFl~FG  227 (340)
                      +++|++||
T Consensus        71 ~~lFl~fG   78 (78)
T PF01169_consen   71 GALFLLFG   78 (78)
T ss_pred             HHHHHHHC
Confidence            99999997

These include, Saccharomyces cerevisiae (Baker's yeast) hypothetical protein YBR187w. Schizosaccharomyces pombe (Fission yeast) hypothetical protein SpAC17G8.08c. Mus musculus (Mouse) protein pFT27. Synechocystis sp. (strain PCC 6803) hypothetical protein sll0615. These are hydrophobic proteins of 200 to 320 amino acids that seem to contain six or seven transmembrane domains.; GO: 0016020 membrane

>PF01169 UPF0016: Uncharacterized protein family UPF0016; InterPro: IPR001727 A number of uncharacterised proteins share regions of similarities

Probab=99.82  E-value=1e-20  Score=150.23  Aligned_cols=68  Identities=41%  Similarity=0.532  Sum_probs=65.4

Q ss_pred             HHHHHHHHHHHHhCChhHHHHHHHhccc--CCceeehHHHHHHHHHHHHHHHHHHHhhhcccHhHHhhcc
Q 019473          270 IISTFTLVFVAEWGDKSFFSTIALAAAS--SPLGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYSNFN  337 (340)
Q Consensus       270 f~~aF~l~FLAE~GDKTQLaTiaLAA~~--~p~~V~~Ga~lg~~l~t~laVl~G~~l~~~is~r~i~~~~  337 (340)
                      |+++|.++|++|||||||++|++||++|  +|+.|++|+++|++++++++|++|+++.+++|++++++++
T Consensus         1 F~~sf~~iflaE~GDKTQl~t~~La~~~~~~~~~V~~G~~~al~~~~~lav~~G~~l~~~ip~~~i~~~~   70 (78)
T PF01169_consen    1 FLTSFLLIFLAELGDKTQLATIALAARYPRNPWPVFAGATLALALATGLAVLLGSWLASRIPERYIKWVA   70 (78)
T ss_pred             CHHHHHHHHHHHhCcHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence            5789999999999999999999999999  8999999999999999999999999999999999999864

These include, Saccharomyces cerevisiae (Baker's yeast) hypothetical protein YBR187w. Schizosaccharomyces pombe (Fission yeast) hypothetical protein SpAC17G8.08c. Mus musculus (Mouse) protein pFT27. Synechocystis sp. (strain PCC 6803) hypothetical protein sll0615. These are hydrophobic proteins of 200 to 320 amino acids that seem to contain six or seven transmembrane domains.; GO: 0016020 membrane

>KOG2881 consensus Predicted membrane protein [Function unknown]

Probab=99.81  E-value=1.1e-20  Score=179.05  Aligned_cols=137  Identities=21%  Similarity=0.232  Sum_probs=106.4

Q ss_pred             cccCCcccchhHHHHHHHHHHHHhcCCccccccc--cc-ccCCC-------C-------ccc---CCCC---------cc
Q 019473           87 ESVHNLANDSGLIKFVMFFGLLTLQGSQTAVAAV--DF-ASGLQ-------S-------FPF---LGDL---------GD  137 (340)
Q Consensus        87 ~~~~~~~~~~~~~~lFl~FGl~tLr~a~~~~~~s--d~-~~~~~-------~-------~~~---~g~~---------~~  137 (340)
                      ..+...+||.+. +||++||+|+|+++..+.+..  ++ +|.++       +       .+.   .+..         ..
T Consensus       126 lipr~~T~~~~t-~LF~iFGlkmL~eg~~~~~~~~~eE~eEVe~el~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~t~f  204 (294)
T KOG2881|consen  126 LIPRKYTYYLAT-ALFLIFGLKMLKEGWEMSPSEGQEELEEVEAELAKREDELDRLEEGLPGSAETGSQKSKFRRKLTLF  204 (294)
T ss_pred             hchHHHHHHHHH-HHHHHHHHHHHHHhhcCCCccchhhHHHHHHHHHhccchhhhhhhcCCCCCccchhhhhhhHHHHHh
Confidence            335667788885 999999999999885443211  11 00000       0       000   0100         01


Q ss_pred             hhHHHHHHHHHHHHHhcCchHHHHHHHHHhccCCcEeehhHHHHHHHHHHHHHHHccccccccccCCccccCCCcchhHH
Q 019473          138 ISRGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDI  217 (340)
Q Consensus       138 ~~~~f~~aF~liFLAElGDKTQLati~LAar~~~~~Vf~Ga~lAl~l~t~LaV~~G~~~~~l~~~Lp~r~~~~~~~v~~i  217 (340)
                      +...|+.+|.++|++|||||+||+|++||++-+++.|++|+.+|+.+||.+||+.|+.   ++++|++|.       +.+
T Consensus       205 fspifikaFsltF~aEwGDRSQlaTI~laA~en~~gV~~G~~iGH~lCT~lAVigGk~---lAskIS~rt-------Vt~  274 (294)
T KOG2881|consen  205 FSPIFIKAFSLTFLAEWGDRSQLATIALAADENPLGVAIGAIIGHALCTGLAVIGGKY---LASKISVRT-------VTL  274 (294)
T ss_pred             ccHHHHHHHHHHHHHHhccHHHHHHHHHhcccCcceeeeccHHHHHHHHHHHHhhhHH---HhhhheeEE-------EEE
Confidence            3468999999999999999999999999999999999999999999999999999996   899999997       578


Q ss_pred             HHHHHHHHHHHHHhhhc
Q 019473          218 AAVCLLVYFGVSTLLDA  234 (340)
Q Consensus       218 ~aa~LFl~FG~~~L~~a  234 (340)
                      +++++|+.||+..++.+
T Consensus       275 ~ggi~Fi~Fgl~~i~~~  291 (294)
T KOG2881|consen  275 IGGILFIIFGLVYIFQG  291 (294)
T ss_pred             ecchhHHHHHHHHHhcC
Confidence            89999999999999873

>COG4280 Predicted membrane protein [Function unknown]

Probab=97.19  E-value=0.0025  Score=59.88  Aligned_cols=158  Identities=25%  Similarity=0.316  Sum_probs=97.7

Q ss_pred             HHHHHHHhc--cCCcEeehhHHHHHHHHHHHHHHHccccccccccCCccccCCCcchhHHHHHHHHHHHHHHHhhhcccC
Q 019473          160 FIAALLAAR--NSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAAST  237 (340)
Q Consensus       160 Lati~LAar--~~~~~Vf~Ga~lAl~l~t~LaV~~G~~~~~l~~~Lp~r~~~~~~~v~~i~aa~LFl~FG~~~L~~a~~~  237 (340)
                      ..+++.+-.  |++..-+.|+.+|+++.-.++.++|..+    ..+|-.+       .+++++++.+.||-.-++.+.+.
T Consensus        20 a~aIa~avg~~~~wr~al~ga~lglalvl~l~lvlGk~L----~lvPln~-------lqiv~gvLLllFG~rw~Rsavrr   88 (236)
T COG4280          20 AGAIAAAVGNIYKWRLALIGAVLGLALVLILTLVLGKLL----YLVPLNY-------LQIVSGVLLLLFGYRWIRSAVRR   88 (236)
T ss_pred             HHHHHHhhhhhccccHHHHHHHHHHHHHHHHHHHHccce----eeeechH-------HHHHHHHHHHHHHHHHHHHHHHH
Confidence            344544443  3344489999999999999999999973    5678876       68999999999999888876431


Q ss_pred             -CCC-CchhHHH-HHHHhhhhccCCCccchhhHHHHHHHHHHHHHHHhCChhHHHHHHHhccc-CCceeehHHHHHHHHH
Q 019473          238 -DGL-KSEDEQK-EAELAVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAAS-SPLGVIGGALAGHVVA  313 (340)
Q Consensus       238 -~~~-~~eeE~~-eae~~v~~~~~~~~g~~~~~~~f~~aF~l~FLAE~GDKTQLaTiaLAA~~-~p~~V~~Ga~lg~~l~  313 (340)
                       .+. +-.+||+ |+....++ +.  .|. + .-.++.+|-.+-+ | |=---+..|+|.+.+ .+..-..|+..+..+.
T Consensus        89 ~ag~rkg~~ee~leE~~~ldq-~e--~g~-~-~la~l~~fk~v~L-e-glEv~~iVialgaa~sqwleAi~gagfA~vlv  161 (236)
T COG4280          89 FAGIRKGGGEEKLEEGIVLDQ-EE--EGF-S-KLALLVVFKVVAL-E-GLEVSLIVIALGAASSQWLEAIMGAGFASVLV  161 (236)
T ss_pred             HhchhccCchhhHhhhhhccc-cc--ccc-h-hhhHHHHhHHHHH-h-hheeeeeeeeechhhhHHHHHHHHHHHHHHHH
Confidence             111 1111222 22221111 11  121 1 1123344422222 1 222334566666655 4666778888888888


Q ss_pred             HHHHHHHHHHhhhcccHhHHhhc
Q 019473          314 TLLAVLGGSLLGTFLSEKVYSNF  336 (340)
Q Consensus       314 t~laVl~G~~l~~~is~r~i~~~  336 (340)
                      -.++.++-..++| +|++.+|..
T Consensus       162 lvl~~~lh~plar-vpe~~lKfv  183 (236)
T COG4280         162 LVLTAILHSPLAR-VPEPHLKFV  183 (236)
T ss_pred             HHHHHHhccHHhh-CCchhHHHH
Confidence            8888888888855 999988864

>TIGR02840 spore_YtaF putative sporulation protein YtaF

Probab=96.47  E-value=0.031  Score=51.77  Aligned_cols=49  Identities=20%  Similarity=0.379  Sum_probs=40.6

Q ss_pred             HHHHHHHHHHHHHccccccccccCCccccCCCcchhHHHHHHHHHHHHHHHhhhcccCC
Q 019473          180 GALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTD  238 (340)
Q Consensus       180 lAl~l~t~LaV~~G~~~~~l~~~Lp~r~~~~~~~v~~i~aa~LFl~FG~~~L~~a~~~~  238 (340)
                      +...+|+.++..+|+.   +.+.+|.++       .++++++++++.|+++++|+++.+
T Consensus        38 ~~~~~~~~lg~~~G~~---~~~~i~~~~-------~~~ig~~iLi~iG~~mi~~~~~~~   86 (206)
T TIGR02840        38 VISGLFIFISMLLGKF---LAKFLPPKV-------TEILGAFILIAIGIWIIYNAFRPK   86 (206)
T ss_pred             HHHHHHHHHHHHHHHH---HHHHhchhh-------HHHHHHHHHHHHHHHHHHHHHhhh
Confidence            3445889999999987   677888765       689999999999999999998643

This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.

>PRK11469 hypothetical protein; Provisional

Probab=95.19  E-value=0.055  Score=49.62  Aligned_cols=44  Identities=14%  Similarity=0.259  Sum_probs=35.0

Q ss_pred             HHHHHHHHHHccccccccccCCccccCCCcchhHHHHHHHHHHHHHHHhhhcccC
Q 019473          183 AAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAAST  237 (340)
Q Consensus       183 ~l~t~LaV~~G~~~~~l~~~Lp~r~~~~~~~v~~i~aa~LFl~FG~~~L~~a~~~  237 (340)
                      .+|..++-.+|+.   +.+.+|. +       .++++.++.++.|.||++|+++.
T Consensus        48 ~~m~~~g~~~G~~---l~~~i~~-~-------~~~i~~~lL~~lG~~mi~e~~~~   91 (188)
T PRK11469         48 TLTPLIGWGMGML---ASRFVLE-W-------NHWIAFVLLIFLGGRMIIEGFRG   91 (188)
T ss_pred             HHHHHHHHHHHHH---HHHHHHH-H-------HHHHHHHHHHHHHHHHHHHHHhc
Confidence            5777788888886   5566665 4       68899999999999999998863

>PF01810 LysE: LysE type translocator; InterPro: IPR001123 Lysine exporter protein is involved in the efflux of excess L-lysine as a control for intracellular levels of L-lysine

Probab=95.02  E-value=0.3  Score=43.16  Aligned_cols=69  Identities=17%  Similarity=0.144  Sum_probs=49.0

Q ss_pred             HHHHHHHhccCCcE---eehhHHHHHHHHHHHHHHHccccccccccCCccccCCCcchhHHHHHHHHHHHHHHHhhhccc
Q 019473          160 FIAALLAARNSAAT---VFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAAS  236 (340)
Q Consensus       160 Lati~LAar~~~~~---Vf~Ga~lAl~l~t~LaV~~G~~~~~l~~~Lp~r~~~~~~~v~~i~aa~LFl~FG~~~L~~a~~  236 (340)
                      +..+-.++++++..   +.+|..++-++...++++.-..   +.+..|.-.     .+.++++++.++.+|..++++..+
T Consensus        12 ~~~i~~~~~~G~~~~~~~~~G~~~~~~i~~~~~~~g~~~---l~~~~~~~~-----~~l~~~G~~~L~~lg~~~~~~~~~   83 (191)
T PF01810_consen   12 LLVISNGLRKGFKAGLPVALGAALGDLIYILLAVFGLSA---LLKSSPWLF-----MILKLLGALYLLYLGYKLLRSKFS   83 (191)
T ss_pred             HHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhChHHH-----HHHHHHHHHHHHHHHHHHHhcccC
Confidence            45566677777543   7889999988888877776654   333344332     357899999999999999987544

A number of proteins belong to this family. These include the chemotactic transduction protein from Pseudomonas aeruginosa, the threonine efflux protein and a number of uncharacterised proteins from a variety of sources.; GO: 0006865 amino acid transport, 0016020 membrane

>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family

Probab=91.37  E-value=0.85  Score=42.35  Aligned_cols=52  Identities=13%  Similarity=0.291  Sum_probs=39.7

Q ss_pred             CcEeehhHHHHHHHHHHHHHHHccccccccccCCccccCCCcchhHHHHHHHHHHHHHHHhhh
Q 019473          171 AATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLD  233 (340)
Q Consensus       171 ~~~Vf~Ga~lAl~l~t~LaV~~G~~~~~l~~~Lp~r~~~~~~~v~~i~aa~LFl~FG~~~L~~  233 (340)
                      ++.|++|-.+|..+.-++|.+++..    ...+|+.|      +..++ +.+=+++|++.++.
T Consensus        25 ~~~I~~GqylG~~~Lv~~Sl~~~~~----l~~ip~~w------iLGlL-GliPI~lGi~~l~~   76 (191)
T PF03596_consen   25 RRQIVIGQYLGFTILVLASLLGAFG----LLFIPPEW------ILGLL-GLIPIYLGIKALFS   76 (191)
T ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHH----HHhCCHHH------HHHHH-HHHHHHHHHHHHHc
Confidence            3459999999999988888887764    35788877      33556 44568999998885

To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.

>COG1971 Predicted membrane protein [Function unknown]

Probab=91.10  E-value=0.8  Score=42.70  Aligned_cols=24  Identities=13%  Similarity=0.393  Sum_probs=21.5

Q ss_pred             hHHHHHHHHHHHHHHHhhhcccCC
Q 019473          215 DDIAAVCLLVYFGVSTLLDAASTD  238 (340)
Q Consensus       215 ~~i~aa~LFl~FG~~~L~~a~~~~  238 (340)
                      .++++.+++++.|+||++|+.+.|
T Consensus        69 ~~wigf~lL~~lG~~mI~e~f~~~   92 (190)
T COG1971          69 AHWIGFVLLIILGLKMIIEGFKNE   92 (190)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhchh
Confidence            688999999999999999998753

>TIGR00948 2a75 L-lysine exporter

Probab=89.19  E-value=4.2  Score=35.87  Aligned_cols=67  Identities=10%  Similarity=0.035  Sum_probs=44.2

Q ss_pred             HHHHHHhccCCcE-eehhHHHHHHHHHHHHHHHccccccccccCCccccCCCcchhHHHHHHHHHHHHHHHhhhcc
Q 019473          161 IAALLAARNSAAT-VFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAA  235 (340)
Q Consensus       161 ati~LAar~~~~~-Vf~Ga~lAl~l~t~LaV~~G~~~~~l~~~Lp~r~~~~~~~v~~i~aa~LFl~FG~~~L~~a~  235 (340)
                      ..+..++++++-. +.+|..+|.++...++++.-..   +-+..|.-.     ...++++++-.+.+|..++++..
T Consensus        11 ~vi~~~~~~~~g~~~~~G~~~g~~i~~~~~~~Gl~~---ll~~~p~~~-----~~l~~~Ga~YLlylg~~~~r~~~   78 (177)
T TIGR00948        11 FVLRQGIRREHVLLIVALCCICDLVLIAAGVFGVAA---LLAASPILL-----AVLTWGGALFLLWYGFLAAKTAW   78 (177)
T ss_pred             HHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHCHHHH-----HHHHHHHHHHHHHHHHHHHHHHh
Confidence            3445555555433 7788888888887777665544   233445443     25788888777889999998753

>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein

Probab=89.05  E-value=5.1  Score=36.68  Aligned_cols=148  Identities=18%  Similarity=0.280  Sum_probs=79.4

Q ss_pred             CchHHHHHHHHHh---ccCCcEeehhHHHHHHHHHHHHHHHccccccccccCCccccCCCcchhHHHHHHHHHHHHHHHh
Q 019473          155 GDKTFFIAALLAA---RNSAATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTL  231 (340)
Q Consensus       155 GDKTQLati~LAa---r~~~~~Vf~Ga~lAl~l~t~LaV~~G~~~~~l~~~Lp~r~~~~~~~v~~i~aa~LFl~FG~~~L  231 (340)
                      +|.-..++++..-   ++++...+.|...|+++-.++-......+    +..|         ..++++++..++-|+..+
T Consensus        12 ~DN~~vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll----~~~~---------~i~~igG~~Ll~~a~k~~   78 (183)
T PF03741_consen   12 IDNAFVIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLL----SIFP---------WILLIGGLFLLYIAIKLL   78 (183)
T ss_pred             hhHHHHHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHH----HHHH---------HHHHHHHHHHHHHHHHHH
Confidence            4554444443322   23455689999999977766665555432    2222         356777766666777777


Q ss_pred             hhcccCCCCCchhHHHHHHHhhhhccCCCccchhhHHHHHHHHHHHHHHH--hCChhHHHHHHHhcccCCceeehHHHHH
Q 019473          232 LDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAASTIISTFTLVFVAE--WGDKSFFSTIALAAASSPLGVIGGALAG  309 (340)
Q Consensus       232 ~~a~~~~~~~~eeE~~eae~~v~~~~~~~~g~~~~~~~f~~aF~l~FLAE--~GDKTQLaTiaLAA~~~p~~V~~Ga~lg  309 (340)
                      ++..+    +++++...++.  ++..+.      ....++.+...+-++-  +-=-+=+|.++++  .+++.++.|.+++
T Consensus        79 ~~~~~----~d~~~~~~~~~--~~~~~~------~~~~~~~~v~~I~~~DlvfSlDSV~a~~~it--~~~~iv~~g~i~s  144 (183)
T PF03741_consen   79 HEERD----EDPENAEVEEE--KKFFPV------SKSSLWLAVIQIELADLVFSLDSVLAAVGIT--DDFFIVITGNIIS  144 (183)
T ss_pred             Hhccc----cccchhhhhhh--hccccc------hhHHHHHHHHHHHHHHHHHHHhHHHHHHHHh--hhHHHHHHHHHHH
Confidence            76331    11111111110  011000      0123444443332221  1113556777766  6788899999988


Q ss_pred             HHHHHHHHHHHHHHhhhccc
Q 019473          310 HVVATLLAVLGGSLLGTFLS  329 (340)
Q Consensus       310 ~~l~t~laVl~G~~l~~~is  329 (340)
                      ..+--..+-++.+.+.++-.
T Consensus       145 i~~m~~~~~~~~~~l~~~p~  164 (183)
T PF03741_consen  145 ILLMRFLSFLLAKLLERFPY  164 (183)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            88877777777777766533

TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane

>TIGR00145 FTR1 family protein

Probab=88.73  E-value=5.7  Score=38.93  Aligned_cols=60  Identities=20%  Similarity=0.191  Sum_probs=38.3

Q ss_pred             CcEeehhHHHHHHHHHHHHHHHccccccccccCCccccCCCcchhHHHHHHHHHHHHHHHhhh
Q 019473          171 AATVFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLD  233 (340)
Q Consensus       171 ~~~Vf~Ga~lAl~l~t~LaV~~G~~~~~l~~~Lp~r~~~~~~~v~~i~aa~LFl~FG~~~L~~  233 (340)
                      +++||.|+.+|++++-++++++-..+..+.....+..-+   -+..++|+++....++||...
T Consensus        38 ~~~V~~G~~~gl~~s~~~a~~~~~~~~~~~~~~~~el~e---g~~~lvAv~~l~~m~~Wm~~~   97 (283)
T TIGR00145        38 RGWVWVGVLAGFAACLAIGIGVIGAYGSLQKDEFKELLE---GIFGVIAVVMLSYMGLWMLRM   97 (283)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHH---HHHHHHHHHHHHHHHHHHHHH
Confidence            456999999999999887777665421121111011101   135677788888999999954

A characterized member from yeast acts as oxidase-coupled high affinity iron transporter. Note that the apparent member from E. coli K12-MG1655 has a frameshift by homology with member sequences from other species.

>PF01914 MarC: MarC family integral membrane protein; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC

Probab=88.09  E-value=3.5  Score=38.17  Aligned_cols=105  Identities=19%  Similarity=0.184  Sum_probs=57.7

Q ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCCCCchhHHHHHHHhhhhccCCCccchhhHHHHHHHHHHHHHHHhCChhHHHHHHH
Q 019473          214 IDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIAL  293 (340)
Q Consensus       214 v~~i~aa~LFl~FG~~~L~~a~~~~~~~~eeE~~eae~~v~~~~~~~~g~~~~~~~f~~aF~l~FLAE~GDKTQLaTiaL  293 (340)
                      -.+++|+++.+..|+.|+....+.++ ..++|.+|.+. ..+.     ..    .++.    +=.+  -|.-|=-+++.+
T Consensus        71 af~IaGGiiL~~ia~~ml~~~~~~~~-~~~~~~~~~~~-~~~~-----ai----~PLa----~Pll--aGPG~It~vi~~  133 (203)
T PF01914_consen   71 AFRIAGGIILFLIALEMLFGSPSSEK-SSPDEKEEAKD-AEDI-----AI----VPLA----IPLL--AGPGTITTVIVL  133 (203)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCcccc-cccchhhhhcc-cccc-----ee----cccc----hhhc--cChHHHHHHHHH
Confidence            36899999999999999986433211 11111111110 0010     00    0100    0011  255555556666


Q ss_pred             hcccCC---ceeehHHHHHHHHHHHHHHHHHHHhhhcccHhHHhh
Q 019473          294 AAASSP---LGVIGGALAGHVVATLLAVLGGSLLGTFLSEKVYSN  335 (340)
Q Consensus       294 AA~~~p---~~V~~Ga~lg~~l~t~laVl~G~~l~~~is~r~i~~  335 (340)
                      +++++.   ..+.+++.+...+.+.+....++++.|++.+..++.
T Consensus       134 ~~~~~~~~~~~~~~~ai~~~~~~~~l~l~~a~~i~~~lG~~g~~v  178 (203)
T PF01914_consen  134 SAEAGSLQSLLIVLIAILLVALITYLILRFADKIMRRLGKTGLQV  178 (203)
T ss_pred             HhccCcHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHH
Confidence            666543   345556666667777777778888888887766554

These proteins may be transporters. ; GO: 0016021 integral to membrane

>COG0730 Predicted permeases [General function prediction only]

Probab=86.69  E-value=3.5  Score=38.44  Aligned_cols=152  Identities=20%  Similarity=0.119  Sum_probs=75.4

Q ss_pred             eehhHHHHHHHHHHHHHHHccccccccccCCccccCCCcchhHHHHHHHHHHHHHHHhhhcccCCCCCchhHHHHHHHhh
Q 019473          174 VFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQKEAELAV  253 (340)
Q Consensus       174 Vf~Ga~lAl~l~t~LaV~~G~~~~~l~~~Lp~r~~~~~~~v~~i~aa~LFl~FG~~~L~~a~~~~~~~~eeE~~eae~~v  253 (340)
                      +-.-...-+.....+++.+|..   +...+|.++       .+.+-+.+.++.+++++++...... ++++++.......
T Consensus        71 v~~~~~~~l~~~~~~G~~lG~~---l~~~~~~~~-------l~~~~~~~ll~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  139 (258)
T COG0730          71 VDWKLALILLLGALIGAFLGAL---LALLLPAEL-------LKLLFGLLLLLLALYMLLGPRLAKA-EDRAARLRPLLFA  139 (258)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHH---HHHhCCHHH-------HHHHHHHHHHHHHHHHHHhcccccc-cccccccCcchhH
Confidence            6667777777777888888865   567788876       3443455678888888887432000 1010000000000


Q ss_pred             h-hccCCCccchhh----HHHHHHHHHHHHHHHhCChhHHHHHHHhc----c-----cCC-ceeehHHHH-HHHHHHHHH
Q 019473          254 S-EFSGNGAGIIAA----ASTIISTFTLVFVAEWGDKSFFSTIALAA----A-----SSP-LGVIGGALA-GHVVATLLA  317 (340)
Q Consensus       254 ~-~~~~~~~g~~~~----~~~f~~aF~l~FLAE~GDKTQLaTiaLAA----~-----~~p-~~V~~Ga~l-g~~l~t~la  317 (340)
                      . ..-+-..|..+.    -..+...-.+..+....+|--.+|-....    .     |-. .+..--... .+.+.+.++
T Consensus       140 ~~~~~g~~~G~~sG~~G~GgG~~~vp~l~~~~~~~~~~~~~ts~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~g~~~G  219 (258)
T COG0730         140 LALLIGFLAGFLSGLFGVGGGFGIVPALLLLLLLPLKLAVATSLAIILNTASNGAALYLFALGAVDWPLALLLAVGSILG  219 (258)
T ss_pred             HHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHH
Confidence            0 000000010000    00122223333444444443333322111    0     100 111111222 788899999


Q ss_pred             HHHHHHhhhcccHhHHhhc
Q 019473          318 VLGGSLLGTFLSEKVYSNF  336 (340)
Q Consensus       318 Vl~G~~l~~~is~r~i~~~  336 (340)
                      .+.|.++.+++|++.++++
T Consensus       220 ~~lG~~l~~~~~~~~lr~~  238 (258)
T COG0730         220 AYLGARLARRLSPKVLRRL  238 (258)
T ss_pred             HHHHHHHHHhcCHHHHHHH
Confidence            9999999999999998864

>PF03239 FTR1: Iron permease FTR1 family; InterPro: IPR004923 The Saccharomyces cerevisiae (Baker's yeast) iron permease FTR1 is a plasma membrane permease for high-affinity iron uptake

Probab=84.42  E-value=12  Score=36.68  Aligned_cols=155  Identities=22%  Similarity=0.174  Sum_probs=78.0

Q ss_pred             CcEeehhHHHHHHHHHHHHHHHccccccccc---cCCccccCCCcchhHHHHHHHHHHHHHHHhhhcccCCCCCchhHHH
Q 019473          171 AATVFAGTFGALAAMTVISVILGRTFHYVDE---ILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAASTDGLKSEDEQK  247 (340)
Q Consensus       171 ~~~Vf~Ga~lAl~l~t~LaV~~G~~~~~l~~---~Lp~r~~~~~~~v~~i~aa~LFl~FG~~~L~~a~~~~~~~~eeE~~  247 (340)
                      +.+||.|+.+|.+.+-.+++.+-.....+.+   ...+...+   -....++.++-....+||...+.+..+ +-+++.+
T Consensus        35 ~~~V~~G~~~g~~~s~~~~~~~~~~~~~~~~~~~~~~~e~~e---g~~~liA~~li~~m~~wm~~~~~~~~~-~~~~~~~  110 (306)
T PF03239_consen   35 RRWVWLGVAAGLVASLVIGAVFAVIFYTLSGDYWGISEELFE---GAISLIAVALITWMVFWMRRHGRKMKG-EWEDKLA  110 (306)
T ss_pred             hheeeecHhHHHHHHHHHHHHHHHHHHhhccchhhhHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhhch-hHHHHHH
Confidence            3779999999999999998887765322221   00111100   023445555666777888764322221 1111111


Q ss_pred             HHHHhhhh---ccCCCccchhhHHHHHHHHHHHHHHHhCChhHHHHHHHhcccC--CceeehHHHHHHHHHHHHHHHHHH
Q 019473          248 EAELAVSE---FSGNGAGIIAAASTIISTFTLVFVAEWGDKSFFSTIALAAASS--PLGVIGGALAGHVVATLLAVLGGS  322 (340)
Q Consensus       248 eae~~v~~---~~~~~~g~~~~~~~f~~aF~l~FLAE~GDKTQLaTiaLAA~~~--p~~V~~Ga~lg~~l~t~laVl~G~  322 (340)
                      ..-...++   .+.+..+....+..+..+|+.+ +=| |=-|=+-..++.+...  ...+..|+.+|.+++.+++++.-+
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~afl~v-lRE-G~E~vLfl~a~~~~~~~~~~~~~~g~~~G~~~a~~~~~~~~~  188 (306)
T PF03239_consen  111 KALSSGSEDARASQKDEGGGSKWALFLLAFLIV-LRE-GLEAVLFLAALAASLRKDAASILLGAILGIAAAVVLGWLLYR  188 (306)
T ss_pred             HHHhhccchhhhhhhccccchhhHHHHHHHHHH-HHh-hHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            00000000   0000011111233444444222 111 4445555555555433  567788888888888888888766


Q ss_pred             HhhhcccHhH
Q 019473          323 LLGTFLSEKV  332 (340)
Q Consensus       323 ~l~~~is~r~  332 (340)
                      .. .++|.+.
T Consensus       189 ~~-~~i~~~~  197 (306)
T PF03239_consen  189 GL-IRISLRS  197 (306)
T ss_pred             HH-HhcChHH
Confidence            54 4577654

Also included in this family are bacterial hypothetical integral membrane proteins.; GO: 0055085 transmembrane transport, 0016020 membrane

>PF01810 LysE: LysE type translocator; InterPro: IPR001123 Lysine exporter protein is involved in the efflux of excess L-lysine as a control for intracellular levels of L-lysine

Probab=82.20  E-value=8.7  Score=33.85  Aligned_cols=20  Identities=25%  Similarity=0.152  Sum_probs=17.0

Q ss_pred             hhHHHHHHHHHHHHHHHhhh
Q 019473          214 IDDIAAVCLLVYFGVSTLLD  233 (340)
Q Consensus       214 v~~i~aa~LFl~FG~~~L~~  233 (340)
                      ++..+++++|++||++++++
T Consensus       171 ~i~~~~g~~li~~av~l~~~  190 (191)
T PF01810_consen  171 WINRISGLLLIGFAVYLLYS  190 (191)
T ss_pred             HHHHHHHHHHHHHHHHHHHc
Confidence            35777888999999999986

A number of proteins belong to this family. These include the chemotactic transduction protein from Pseudomonas aeruginosa, the threonine efflux protein and a number of uncharacterised proteins from a variety of sources.; GO: 0006865 amino acid transport, 0016020 membrane

>COG1971 Predicted membrane protein [Function unknown]

Probab=82.18  E-value=3.5  Score=38.55  Aligned_cols=43  Identities=23%  Similarity=0.392  Sum_probs=31.3

Q ss_pred             HHHHHHHHHHHccccccccccCCccccCCCcchhHHHHHHHHHHHHHHHhhhcc
Q 019473          182 LAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLDAA  235 (340)
Q Consensus       182 l~l~t~LaV~~G~~~~~l~~~Lp~r~~~~~~~v~~i~aa~LFl~FG~~~L~~a~  235 (340)
                      .++++.++..+|+.   +++.+..+        ..++++++++++|++.|++.+
T Consensus       146 T~il~~~G~~IG~~---~g~~~g~~--------ae~lgGiiLI~~G~~iL~~~~  188 (190)
T COG1971         146 TLILSALGAIIGRK---LGKFLGKY--------AEILGGIILIGIGVKILLEHL  188 (190)
T ss_pred             HHHHHHHHHHHHHH---HHHHHhhH--------HHHHHHHHHHHHHHHHHHHhc
Confidence            34566666677754   55566544        578999999999999999743

>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised

Probab=81.05  E-value=5.3  Score=36.20  Aligned_cols=34  Identities=15%  Similarity=0.124  Sum_probs=28.0

Q ss_pred             ehHHHHHHHHHHHHHHHHHHHhhhcccHhHHhhc
Q 019473          303 IGGALAGHVVATLLAVLGGSLLGTFLSEKVYSNF  336 (340)
Q Consensus       303 ~~Ga~lg~~l~t~laVl~G~~l~~~is~r~i~~~  336 (340)
                      .+...+.+...+.++.+.|+++.+++|+++++++
T Consensus       195 ~~~~~~~~~~~~~~G~~lG~~~~~~i~~~~~~~~  228 (240)
T PF01925_consen  195 MLLLSLILLPGAFLGAFLGAKLARKIPQKVFRRI  228 (240)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence            3444555788899999999999999999998864

; GO: 0016021 integral to membrane

>PRK10621 hypothetical protein; Provisional

Probab=80.71  E-value=28  Score=32.89  Aligned_cols=50  Identities=18%  Similarity=0.081  Sum_probs=34.7

Q ss_pred             eehhHHHHHHHHHHHHHHHccccccccccCCccccCCCcchhHHHHHHHHHHHHHHHhhh
Q 019473          174 VFAGTFGALAAMTVISVILGRTFHYVDEILPFRFGQTDLPIDDIAAVCLLVYFGVSTLLD  233 (340)
Q Consensus       174 Vf~Ga~lAl~l~t~LaV~~G~~~~~l~~~Lp~r~~~~~~~v~~i~aa~LFl~FG~~~L~~  233 (340)
                      |=.-...-+.+..++++.+|.+   +...+|+++       .+.+-+++.++.++++++.
T Consensus        75 v~~~~~~~l~~~~l~Ga~~G~~---l~~~l~~~~-------l~~~~~~~ll~~~~~~l~~  124 (266)
T PRK10621         75 VNLADQKLNIAMTFVGSMSGAL---LVQYVQADI-------LRQILPILVIGIGLYFLLM  124 (266)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHH---HHHhCCHHH-------HHHHHHHHHHHHHHHHHHC
Confidence            5556666677788888888986   567888876       4444455566777777754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	340
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.3 bits (114), Expect = 2e-06
 Identities = 44/331 (13%), Positives = 92/331 (27%), Gaps = 116/331 (35%)

Query: 76  DVDCKNCK------MTRESVHNLANDSGLIKFVMF-FGLLTLQGSQTAVAAVDFASGLQ- 127
           + DCK+ +      +++E + ++      +   +  F  L  +  +     V+    L+ 
Sbjct: 32  NFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVE--EVLRI 89

Query: 128 SFPFLGD-LGDISRGFASAFLLIFFSELGDKTF-----FI--------------AALLAA 167
           ++ FL   +    R    + +   + E  D+ +     F                ALL  
Sbjct: 90  NYKFLMSPIKTEQRQ--PSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL 147

Query: 168 RNSAATVFAGTFGA----LAAMTV---------------ISV-----------ILGRTFH 197
           R +   +  G  G+    +A                   +++           +L +  +
Sbjct: 148 RPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLY 207

Query: 198 YVD---EILPFRFGQTDLPIDDIAAV------------CLLV-----------YFGVS-- 229
            +D              L I  I A             CLLV            F +S  
Sbjct: 208 QIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCK 267

Query: 230 TLL---DAASTDGLKSEDEQKEAELAVSEFSGNGAGIIAAASTIISTFT----LVFVAEW 282
            LL       TD L +        +++   S               T T       + ++
Sbjct: 268 ILLTTRFKQVTDFLSA---ATTTHISLDHHS--------------MTLTPDEVKSLLLKY 310

Query: 283 GDKSFFSTIALAAASSPL--GVIGGALAGHV 311
            D            ++P    +I  ++   +
Sbjct: 311 LDCRPQDLPREVLTTNPRRLSIIAESIRDGL 341

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00