Citrus Sinensis ID: 019509

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340
MRLNGEISHKEDEEDEEEKQSGVLQPERLVVGYALTSKKKKSFLQPKLEILARNKGISFVAIDQNRPLSDQGPFDVVLHKLSGMEWCKIIEDYRQKHPEVTILDPPDAIKHLHNRQSMLQDVADLNLSDCNGKVRVPRQMVITKDSLSIPDQVFEAGLKLPLVAKPLVVDGSAKSHELFLAYDRFSLSELEPPMLLQEFVNHGGILFKIYIIGETIKVVRRFSLPNVSKRELAKVVSVFRFPRVSSAAASADDADLDPGIAELPPRPLLERLARELRHRLGLRLFNIDMIREHGMRDVFYVIDINYFPGYGKMPDYEHIFTDFLLSLEQSKCRKRPATAA
ccccccccccccHHHHHHHcccccccccEEEEEEEccccccccccHHHHHHHHHcccEEEEEccccccccccccEEEEEccccHHHHHHHHHHHHHcccEEEEccHHHHHHHHcHHHHHHHHHHccccccccccccccEEEEcccccccHHHHHHccccccEEEEEcccccccccccEEEEEcccccccccccEEEEEEEccccEEEEEEEEccEEEEEEEcccccccHHHHHcccEEEccccccccccccccccccccccccccHHHHHHHHHHHHHHHccEEEEEEEEEEcccccEEEEEEEccccccccccccHHHHHHHHHHHHHHHccccccccc
ccccccccccccHcHcccccccccccccEEEEEEccHHHHHHHcHHHHHHHHHHcccEEEEccccccHHHccccEEEEEEcccHHHHHHHHHHHHHcccEEEEccHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEcccHHHHHHHHHccccccEEEEEEEEcccccccEEEEEEccccHHcccccEEEEEEEccccEEEEEEEEccEEEEEEEcccccccccccccccccccccccccccccccHHcccccccccccHHHHHHHHHHHHHHccccEEEEEEEEEcccccEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHcccccccc
mrlngeishkedeedeeekqsgvlqperLVVGYALTskkkksflqPKLEILARNkgisfvaidqnrplsdqgpfDVVLHKLSGMEWCKIIEDYRqkhpevtildppdaiKHLHNRQSMLQDVADlnlsdcngkvrvprqmvitkdslsipdQVFEAGlklplvakplvvdgsaksHELFLAYdrfslseleppmlLQEFVNHGGILFKIYIIGETIKVVRrfslpnvskrELAKVVSVfrfprvssaaasaddadldpgiaelpprplLERLARELRHRLGLRLFNIDMIREHGMRDVFYVIdinyfpgygkmpdyehIFTDFLLSLEQskcrkrpataa
mrlngeishkedeedeeekqsgvlqperLVVGYALtskkkksflqpKLEILARNKGISFVAidqnrplsdQGPFDVVLHKLSGMEWCKIIEDYRQKHPEVTILDPPDAIKHLHNRQSMLQDVADLNLSDCNGKVRVPRQMVITKDSLSIPDQVFEAGLKLPLVAKPLVVDGSAKSHELFLAYDRFSLSELEPPMLLQEFVNHGGILFKIYIIGETIKVVRRFSlpnvskrelakvvsvfrfprvssaaasaddadldpgiaelpprplLERLARELRHRLGLRLFNIDMIREHGMRDVFYVIDINYFPGYGKMPDYEHIFTDFLLSLEQSKCRKRPATAA
MRLNGEISHKedeedeeeKQSGVLQPERLVVGYALTSKKKKSFLQPKLEILARNKGISFVAIDQNRPLSDQGPFDVVLHKLSGMEWCKIIEDYRQKHPEVTILDPPDAIKHLHNRQSMLQDVADLNLSDCNGKVRVPRQMVITKDSLSIPDQVFEAGlklplvakplvvDGSAKSHELFLAYDRFSLSELEPPMLLQEFVNHGGILFKIYIIGETIKVVRRFSLPNVSKRELAKvvsvfrfprvssaaasaddadLDPGIAelpprpllerlarelrhrlglrlFNIDMIREHGMRDVFYVIDINYFPGYGKMPDYEHIFTDFLLSLEQSKCRKRPATAA
***********************************************LEILARNKGISFVAIDQNRPLSDQGPFDVVLHKLSGMEWCKIIEDYRQKHPEVTILDPPDAIKHLHNRQSMLQDVADLNLSDCNGKVRVPRQMVITKDSLSIPDQVFEAGLKLPLVAKPLVVDGSAKSHELFLAYDRFSLSELEPPMLLQEFVNHGGILFKIYIIGETIKVVRRFSLPNVSKRELAKVVSVFRFPRV***********************LLERLARELRHRLGLRLFNIDMIREHGMRDVFYVIDINYFPGYGKMPDYEHIFTDFLLSL*************
******************************VGYALTSKKKKSFLQPKLEILARNKGISFVAIDQNRPLSDQGPFDVVLHKLSGMEWCKIIEDYRQKHPEVTILDPPDAIKHLHNRQSMLQDVADLNLSDCNGKVRVPRQMVITKDSLSIPDQVFEAGLKLPLVAKPLVVDGSAKSHELFLAYDRFSLSELEPPMLLQEFVNHGGILFKIYIIGETIKVVRRFSLPNV***ELAKVVSVF********************IAELPPRPLLERLARELRHRLGLRLFNIDMIREHGMRDVFYVIDINYFPGYGKMPDYEHIFTDFLLS**************
**********************VLQPERLVVGYALTSKKKKSFLQPKLEILARNKGISFVAIDQNRPLSDQGPFDVVLHKLSGMEWCKIIEDYRQKHPEVTILDPPDAIKHLHNRQSMLQDVADLNLSDCNGKVRVPRQMVITKDSLSIPDQVFEAGLKLPLVAKPLVVDGSAKSHELFLAYDRFSLSELEPPMLLQEFVNHGGILFKIYIIGETIKVVRRFSLPNVSKRELAKVVSVFRFPRV********DADLDPGIAELPPRPLLERLARELRHRLGLRLFNIDMIREHGMRDVFYVIDINYFPGYGKMPDYEHIFTDFLLSLEQS**********
*************************PERLVVGYALTSKKKKSFLQPKLEILARNKGISFVAIDQNRPLSDQGPFDVVLHKLSGMEWCKIIEDYRQKHPEVTILDPPDAIKHLHNRQSMLQDVADLNLSDCNGKVRVPRQMVITKDSLSIPDQVFEAGLKLPLVAKPLVVDGSAKSHELFLAYDRFSLSELEPPMLLQEFVNHGGILFKIYIIGETIKVVRRFSLPNVSKREL*KVVSVFRFPR**S****AD***LDPGIAELPPRPLLERLARELRHRLGLRLFNIDMIREHGMRDVFYVIDINYFPGYGKMPDYEHIFTDFLLSLEQSKCR*******
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MRLNGEISHKEDEEDEEEKQSGVLQPERLVVGYALTSKKKKSFLQPKLEILARNKGISFVAIDQNRPLSDQGPFDVVLHKLSGMEWCKIIEDYRQKHPEVTILDPPDAIKHLHNRQSMLQDVADLNLSDCNGKVRVPRQMVITKDSLSIPDQVFEAGLKLPLVAKPLVVDGSAKSHELFLAYDRFSLSELEPPMLLQEFVNHGGILFKIYIIGETIKVVRRFSLPNVSKRELAKVVSVFRFPRVSSAAASADDADLDPGIAELPPRPLLERLARELRHRLGLRLFNIDMIREHGMRDVFYVIDINYFPGYGKMPDYEHIFTDFLLSLEQSKCRKRPATAA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query340 2.2.26 [Sep-21-2011]
Q9SUG3353 Inositol-tetrakisphosphat yes no 0.985 0.949 0.710 1e-132
O81893391 Inositol-tetrakisphosphat no no 0.905 0.787 0.724 1e-124
Q84Y01342 Inositol-tetrakisphosphat N/A no 0.902 0.897 0.441 9e-73
Q9SBA5319 Inositol-tetrakisphosphat no no 0.888 0.946 0.408 4e-64
Q8BYN3419 Inositol-tetrakisphosphat yes no 0.841 0.682 0.314 1e-36
P0C0T1419 Inositol-tetrakisphosphat yes no 0.841 0.682 0.320 2e-36
Q7ZU91396 Inositol-tetrakisphosphat no no 0.85 0.729 0.313 3e-36
Q13572414 Inositol-tetrakisphosphat yes no 0.841 0.690 0.310 2e-35
Q5F480407 Inositol-tetrakisphosphat yes no 0.85 0.710 0.313 3e-35
Q7SY78396 Inositol-tetrakisphosphat N/A no 0.841 0.722 0.317 6e-35
>sp|Q9SUG3|ITPK2_ARATH Inositol-tetrakisphosphate 1-kinase 2 OS=Arabidopsis thaliana GN=ITPK2 PE=2 SV=2 Back     alignment and function desciption
 Score =  470 bits (1210), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 241/339 (71%), Positives = 285/339 (84%), Gaps = 4/339 (1%)

Query: 1   MRLNGEISHKEDEEDEEEKQSGVLQP----ERLVVGYALTSKKKKSFLQPKLEILARNKG 56
           + +NG    +  E++     S V++     + ++VGYALTSKK KSFLQPKLE LARNKG
Sbjct: 9   ITMNGTREMETTEQETSSPCSLVIEAFPVKKSIIVGYALTSKKIKSFLQPKLEGLARNKG 68

Query: 57  ISFVAIDQNRPLSDQGPFDVVLHKLSGMEWCKIIEDYRQKHPEVTILDPPDAIKHLHNRQ 116
           I FVAIDQN+PLS+QGPFD+VLHK  G EW +I+E++R  HP+VT+LDPPDAI HL NRQ
Sbjct: 69  ILFVAIDQNKPLSEQGPFDIVLHKQIGKEWRRILEEFRLAHPDVTVLDPPDAILHLRNRQ 128

Query: 117 SMLQDVADLNLSDCNGKVRVPRQMVITKDSLSIPDQVFEAGLKLPLVAKPLVVDGSAKSH 176
           SMLQ VAD+NLSD NG+V VP+Q+VI KD+ SIP+ V  AGL+LPLVAKPLV DGSAKSH
Sbjct: 129 SMLQCVADMNLSDSNGRVGVPKQLVIKKDASSIPEAVNNAGLRLPLVAKPLVADGSAKSH 188

Query: 177 ELFLAYDRFSLSELEPPMLLQEFVNHGGILFKIYIIGETIKVVRRFSLPNVSKRELAKVV 236
           EL LAYD+ SL +LEPP++LQEFVNHGG+LFK+YI+GE I+VVRRFSLP+VS+REL K  
Sbjct: 189 ELSLAYDQHSLLKLEPPLVLQEFVNHGGVLFKVYIVGEAIRVVRRFSLPDVSRRELPKSA 248

Query: 237 SVFRFPRVSSAAASADDADLDPGIAELPPRPLLERLARELRHRLGLRLFNIDMIREHGMR 296
            VFRFPRVS AAASADDADLDP IAELPPRPLLERLA+ELR  LGLRLFN+D+IREHG R
Sbjct: 249 GVFRFPRVSCAAASADDADLDPSIAELPPRPLLERLAKELRRGLGLRLFNLDIIREHGTR 308

Query: 297 DVFYVIDINYFPGYGKMPDYEHIFTDFLLSLEQSKCRKR 335
           D FYVIDINYFPGYGKMP+YEH+FTDFLLS+ QS+C+KR
Sbjct: 309 DRFYVIDINYFPGYGKMPEYEHVFTDFLLSVVQSQCKKR 347
Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3. Phosphorylates Ins(3,4,5,6)P4 at position 1 to form Ins(1,3,4,5,6)P5. This reaction is thought to have regulatory importance, since Ins(3,4,5,6)P4 is an inhibitor of plasma membrane Ca(2+)-activated Cl(-) channels, while Ins(1,3,4,5,6)P5 is not. Also phosphorylates Ins(1,3,4)P3 on O-5 and O-6 to form Ins(1,3,4,6)P4, an essential molecule in the hexakisphosphate (InsP6) pathway.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1EC: 5EC: 9
>sp|O81893|ITPK3_ARATH Inositol-tetrakisphosphate 1-kinase 3 OS=Arabidopsis thaliana GN=ITPK3 PE=2 SV=3 Back     alignment and function description
>sp|Q84Y01|ITPK1_MAIZE Inositol-tetrakisphosphate 1-kinase 1 OS=Zea mays GN=ITPK1 PE=2 SV=1 Back     alignment and function description
>sp|Q9SBA5|ITPK1_ARATH Inositol-tetrakisphosphate 1-kinase 1 OS=Arabidopsis thaliana GN=ITPK1 PE=2 SV=1 Back     alignment and function description
>sp|Q8BYN3|ITPK1_MOUSE Inositol-tetrakisphosphate 1-kinase OS=Mus musculus GN=Itpk1 PE=2 SV=1 Back     alignment and function description
>sp|P0C0T1|ITPK1_BOVIN Inositol-tetrakisphosphate 1-kinase OS=Bos taurus GN=ITPK1 PE=1 SV=1 Back     alignment and function description
>sp|Q7ZU91|ITPK1_DANRE Inositol-tetrakisphosphate 1-kinase OS=Danio rerio GN=itpk1 PE=2 SV=2 Back     alignment and function description
>sp|Q13572|ITPK1_HUMAN Inositol-tetrakisphosphate 1-kinase OS=Homo sapiens GN=ITPK1 PE=1 SV=2 Back     alignment and function description
>sp|Q5F480|ITPK1_CHICK Inositol-tetrakisphosphate 1-kinase OS=Gallus gallus GN=ITPK1 PE=2 SV=1 Back     alignment and function description
>sp|Q7SY78|ITPK1_XENLA Inositol-tetrakisphosphate 1-kinase OS=Xenopus laevis GN=itpk1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query340
351722440341 inositol phosphate kinase [Glycine max] 0.997 0.994 0.771 1e-142
356574337338 PREDICTED: inositol-tetrakisphosphate 1- 0.941 0.946 0.793 1e-142
224081885319 predicted protein [Populus trichocarpa] 0.9 0.959 0.755 1e-136
224103791347 predicted protein [Populus trichocarpa] 0.929 0.910 0.778 1e-134
255562182327 Inositol-tetrakisphosphate 1-kinase, put 0.908 0.944 0.794 1e-133
255537904355 Inositol-tetrakisphosphate 1-kinase, put 0.970 0.929 0.721 1e-132
18413088353 inositol-tetrakisphosphate 1-kinase 2 [A 0.985 0.949 0.710 1e-130
222624511349 hypothetical protein OsJ_10020 [Oryza sa 0.982 0.957 0.671 1e-129
351721983354 inositol phosphate kinase [Glycine max] 0.985 0.946 0.692 1e-129
115451713349 Os03g0230500 [Oryza sativa Japonica Grou 0.982 0.957 0.668 1e-129
>gi|351722440|ref|NP_001237500.1| inositol phosphate kinase [Glycine max] gi|156752167|gb|ABU93834.1| inositol phosphate kinase [Glycine max] Back     alignment and taxonomy information
 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 263/341 (77%), Positives = 299/341 (87%), Gaps = 2/341 (0%)

Query: 1   MRLNGEISHKEDEEDEEEKQSGVLQPERLVVGYALTSKKKKSFLQPKLEILARNKGISFV 60
           MRLNGEIS  E+EE+E++  +     +++VVGYALTSKKKKSFLQP    LARN+GI+FV
Sbjct: 1   MRLNGEISSGEEEEEEKQTGTTTFSSQKVVVGYALTSKKKKSFLQPSFTGLARNRGINFV 60

Query: 61  AIDQNRPLSDQGPFDVVLHKLSGMEWCKIIEDYRQKHPEVTILDPPDAIKHLHNRQSMLQ 120
           AID N+PL +QGPFD++LHKLSG  W +IIEDYR+KHPEVT+LDPPDAI+HLHNRQSMLQ
Sbjct: 61  AIDLNKPLPEQGPFDIILHKLSGEVWREIIEDYREKHPEVTVLDPPDAIQHLHNRQSMLQ 120

Query: 121 DVADLNLSDCNGKVRVPRQMVITK--DSLSIPDQVFEAGLKLPLVAKPLVVDGSAKSHEL 178
           DV DLNLSDC+GKV VPRQ+VITK  D  SIP +V +AG+KLPLVAKPLVVDG+AKSHEL
Sbjct: 121 DVLDLNLSDCHGKVGVPRQLVITKEKDPSSIPYEVTKAGMKLPLVAKPLVVDGTAKSHEL 180

Query: 179 FLAYDRFSLSELEPPMLLQEFVNHGGILFKIYIIGETIKVVRRFSLPNVSKRELAKVVSV 238
           FLAYD FSLS +EPP++LQEFVNHGG+LFKIYI+GETIKVVRRFSLPN+SKREL+KV  V
Sbjct: 181 FLAYDEFSLSAVEPPLVLQEFVNHGGLLFKIYIVGETIKVVRRFSLPNISKRELSKVAGV 240

Query: 239 FRFPRVSSAAASADDADLDPGIAELPPRPLLERLARELRHRLGLRLFNIDMIREHGMRDV 298
           FRFPRVS AAASADDADLDP IAE PPRPLLERLARELRHRLGL LFNIDMIRE+G +DV
Sbjct: 241 FRFPRVSCAAASADDADLDPNIAEHPPRPLLERLARELRHRLGLHLFNIDMIREYGTKDV 300

Query: 299 FYVIDINYFPGYGKMPDYEHIFTDFLLSLEQSKCRKRPATA 339
           FYVIDINYFPGYGKMP YEH+FTDFLLSL +SKC  +   A
Sbjct: 301 FYVIDINYFPGYGKMPGYEHVFTDFLLSLVESKCSNKKLAA 341

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356574337|ref|XP_003555305.1| PREDICTED: inositol-tetrakisphosphate 1-kinase 2-like [Glycine max] Back     alignment and taxonomy information
>gi|224081885|ref|XP_002306515.1| predicted protein [Populus trichocarpa] gi|222855964|gb|EEE93511.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224103791|ref|XP_002313195.1| predicted protein [Populus trichocarpa] gi|222849603|gb|EEE87150.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255562182|ref|XP_002522099.1| Inositol-tetrakisphosphate 1-kinase, putative [Ricinus communis] gi|223538698|gb|EEF40299.1| Inositol-tetrakisphosphate 1-kinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255537904|ref|XP_002510017.1| Inositol-tetrakisphosphate 1-kinase, putative [Ricinus communis] gi|223550718|gb|EEF52204.1| Inositol-tetrakisphosphate 1-kinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|18413088|ref|NP_567334.1| inositol-tetrakisphosphate 1-kinase 2 [Arabidopsis thaliana] gi|83288250|sp|Q9SUG3.2|ITPK2_ARATH RecName: Full=Inositol-tetrakisphosphate 1-kinase 2; AltName: Full=Inositol 1,3,4-trisphosphate 5/6-kinase 2; Short=AtItpk-2; Short=Inositol-triphosphate 5/6-kinase 2; Short=Ins(1,3,4)P(3) 5/6-kinase 2 gi|15215758|gb|AAK91424.1| AT4g08170/T12G13_10 [Arabidopsis thaliana] gi|16323320|gb|AAL15415.1| AT4g08170/T12G13_10 [Arabidopsis thaliana] gi|332657201|gb|AEE82601.1| inositol-tetrakisphosphate 1-kinase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|222624511|gb|EEE58643.1| hypothetical protein OsJ_10020 [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|351721983|ref|NP_001237484.1| inositol phosphate kinase [Glycine max] gi|156752165|gb|ABU93833.1| inositol phosphate kinase [Glycine max] Back     alignment and taxonomy information
>gi|115451713|ref|NP_001049457.1| Os03g0230500 [Oryza sativa Japonica Group] gi|33303695|gb|AAQ02374.1| inositol 1,3,4-trisphosphate 5/6-kinase [Oryza sativa] gi|108706985|gb|ABF94780.1| inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed [Oryza sativa Japonica Group] gi|113547928|dbj|BAF11371.1| Os03g0230500 [Oryza sativa Japonica Group] gi|215704830|dbj|BAG94858.1| unnamed protein product [Oryza sativa Japonica Group] gi|218192383|gb|EEC74810.1| hypothetical protein OsI_10626 [Oryza sativa Indica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query340
TAIR|locus:2132487353 AT4G08170 [Arabidopsis thalian 0.902 0.869 0.615 4.1e-97
TAIR|locus:2134253391 AT4G33770 [Arabidopsis thalian 0.914 0.795 0.585 1.4e-94
TAIR|locus:2148990319 ITPK1 "inositol (1,3,4) P3 5/6 0.597 0.636 0.411 4.7e-50
ZFIN|ZDB-GENE-040426-1953396 itpk1 "inositol 1,3,4-triphosp 0.570 0.489 0.314 1.5e-27
UNIPROTKB|J9NW00419 ITPK1 "Uncharacterized protein 0.573 0.465 0.314 8.5e-27
UNIPROTKB|Q5F480407 ITPK1 "Inositol-tetrakisphosph 0.579 0.484 0.298 2.9e-26
UNIPROTKB|P0C0T1419 ITPK1 "Inositol-tetrakisphosph 0.567 0.460 0.306 5.6e-26
RGD|1595691421 Itpk1 "inositol-tetrakisphosph 0.567 0.458 0.306 7.5e-26
MGI|MGI:2446159419 Itpk1 "inositol 1,3,4-triphosp 0.567 0.460 0.302 1.2e-25
UNIPROTKB|Q13572414 ITPK1 "Inositol-tetrakisphosph 0.573 0.471 0.300 3.4e-25
TAIR|locus:2132487 AT4G08170 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 965 (344.8 bits), Expect = 4.1e-97, P = 4.1e-97
 Identities = 189/307 (61%), Positives = 223/307 (72%)

Query:    29 LVVGYALTSKKKKSFLQPKLEILARNKGISFVAIDQNRPLSDQGPFDVVLHKLSGMEWCK 88
             ++VGYALTSKK KSFLQPKLE LARNKGI FVAIDQN+PLS+QGPFD+VLHK  G EW +
Sbjct:    41 IIVGYALTSKKIKSFLQPKLEGLARNKGILFVAIDQNKPLSEQGPFDIVLHKQIGKEWRR 100

Query:    89 IIEDYRQKHPEVTILDPPDAIKHLHNRQSMLQDVADLNLSDCNGKVRVPRQMVITKDSLS 148
             I+E++R  HP+VT+LDPPDAI HL NRQSMLQ VAD+NLSD NG+V VP+Q+VI KD+ S
Sbjct:   101 ILEEFRLAHPDVTVLDPPDAILHLRNRQSMLQCVADMNLSDSNGRVGVPKQLVIKKDASS 160

Query:   149 IPDQVFEAGXXXXXXXXXXXXDGSAKSHELFLAYDRFSLSELEPPMLLQEFVNHGGILFK 208
             IP+ V  AG            DGSAKSHEL LAYD+ SL +LEPP++LQEFVNHGG+LFK
Sbjct:   161 IPEAVNNAGLRLPLVAKPLVADGSAKSHELSLAYDQHSLLKLEPPLVLQEFVNHGGVLFK 220

Query:   209 IYIIGETIKVVRRFSLPNVSKRELAKXXXXXXXXXXXXXXXXXXXXXLDPGIAXXXXXXX 268
             +YI+GE I+VVRRFSLP+VS+REL K                     LDP IA       
Sbjct:   221 VYIVGEAIRVVRRFSLPDVSRRELPKSAGVFRFPRVSCAAASADDADLDPSIAELPPRPL 280

Query:   269 XXXXXXXXXXXXXXXXFNIDMIREHGMRDVFYVIDINYFPGYGKMPDYEHIFTDFLLSLE 328
                             FN+D+IREHG RD FYVIDINYFPGYGKMP+YEH+FTDFLLS+ 
Sbjct:   281 LERLAKELRRGLGLRLFNLDIIREHGTRDRFYVIDINYFPGYGKMPEYEHVFTDFLLSVV 340

Query:   329 QSKCRKR 335
             QS+C+KR
Sbjct:   341 QSQCKKR 347
GO:0000287 "magnesium ion binding" evidence=IEA
GO:0003824 "catalytic activity" evidence=ISS
GO:0005524 "ATP binding" evidence=IEA
GO:0005622 "intracellular" evidence=IEA
GO:0005634 "nucleus" evidence=ISM;IDA
GO:0032957 "inositol trisphosphate metabolic process" evidence=IEA
GO:0046872 "metal ion binding" evidence=IEA
GO:0047325 "inositol tetrakisphosphate 1-kinase activity" evidence=IEA
GO:0052725 "inositol-1,3,4-trisphosphate 6-kinase activity" evidence=IEA
GO:0052726 "inositol-1,3,4-trisphosphate 5-kinase activity" evidence=IEA
GO:0005737 "cytoplasm" evidence=IDA
GO:0009611 "response to wounding" evidence=IEP;RCA
GO:0009620 "response to fungus" evidence=RCA
GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA
GO:0009753 "response to jasmonic acid stimulus" evidence=RCA
TAIR|locus:2134253 AT4G33770 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2148990 ITPK1 "inositol (1,3,4) P3 5/6-kinase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-1953 itpk1 "inositol 1,3,4-triphosphate 5/6 kinase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|J9NW00 ITPK1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q5F480 ITPK1 "Inositol-tetrakisphosphate 1-kinase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P0C0T1 ITPK1 "Inositol-tetrakisphosphate 1-kinase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|1595691 Itpk1 "inositol-tetrakisphosphate 1-kinase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:2446159 Itpk1 "inositol 1,3,4-triphosphate 5/6 kinase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q13572 ITPK1 "Inositol-tetrakisphosphate 1-kinase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9SUG3ITPK2_ARATH2, ., 7, ., 1, ., 1, 5, 90.71090.98520.9490yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.1.1340.991
4th Layer2.7.1.1590.991
3rd Layer2.7.10.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.V.4486.1
hypothetical protein (319 aa)
(Populus trichocarpa)
Predicted Functional Partners:
estExt_Genewise1_v1.C_LG_IX2631
hypothetical protein (348 aa)
     •••0.900
gw1.XIX.770.1
hypothetical protein (311 aa)
     • •0.899
gw1.III.1387.1
hypothetical protein (309 aa)
     • •0.899
gw1.29.16.1
hypothetical protein (315 aa)
     • •0.899
estExt_fgenesh4_pg.C_LG_V0044
hypothetical protein (396 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query340
PLN02941328 PLN02941, PLN02941, inositol-tetrakisphosphate 1-k 0.0
pfam05770307 pfam05770, Ins134_P3_kin, Inositol 1, 3, 4-trispho 1e-163
pfam13535183 pfam13535, ATP-grasp_4, ATP-grasp domain 0.001
>gnl|CDD|215508 PLN02941, PLN02941, inositol-tetrakisphosphate 1-kinase Back     alignment and domain information 
 Score =  579 bits (1495), Expect = 0.0
 Identities = 219/315 (69%), Positives = 253/315 (80%), Gaps = 3/315 (0%)

Query: 21  SGVLQPERLVVGYALTSKKKKSFLQPKLEILARNKGISFVAIDQNRPLSDQGPFDVVLHK 80
           S   Q +R VVGYALT KK KSFLQP LE LAR+KGI  VAID +RPLS+QGPFDV+LHK
Sbjct: 14  SSSSQQKRFVVGYALTPKKVKSFLQPSLEALARSKGIDLVAIDPSRPLSEQGPFDVILHK 73

Query: 81  LSGMEWCKIIEDYRQKHPEVTILDPPDAIKHLHNRQSMLQDVADLNLSDCNGKVRVPRQM 140
           L G EW + +E+YR+KHP+VT+LDPPDAI+ LHNRQSMLQ VADL LSD  G V VP+Q+
Sbjct: 74  LYGKEWRQQLEEYREKHPDVTVLDPPDAIQRLHNRQSMLQVVADLKLSDGYGSVGVPKQL 133

Query: 141 VITKDSLSIPDQVFEAGLKLPLVAKPLVVDGSAKSHELFLAYDRFSLSELEPPMLLQEFV 200
           V+  D  SIPD V  AGLK PLVAKPLV DGSAKSH++ LAYD+  LS+LEPP++LQEFV
Sbjct: 134 VVYDDESSIPDAVALAGLKFPLVAKPLVADGSAKSHKMSLAYDQEGLSKLEPPLVLQEFV 193

Query: 201 NHGGILFKIYIIGETIKVVRRFSLPNVSKRELAKVVSVFRFPRVSSAAASADDAD---LD 257
           NHGG+LFK+Y++G+ +K VRRFSLP+VS+ EL+    V  FPRVS+AAASADDAD   LD
Sbjct: 194 NHGGVLFKVYVVGDYVKCVRRFSLPDVSEEELSSAEGVLPFPRVSNAAASADDADNGGLD 253

Query: 258 PGIAELPPRPLLERLARELRHRLGLRLFNIDMIREHGMRDVFYVIDINYFPGYGKMPDYE 317
           P +AELPPRP LE LARELR RLGLRLFN DMIREHG  D +YVIDINYFPGY KMP YE
Sbjct: 254 PEVAELPPRPFLEDLARELRRRLGLRLFNFDMIREHGTGDRYYVIDINYFPGYAKMPGYE 313

Query: 318 HIFTDFLLSLEQSKC 332
            + TDFLLSL Q K 
Sbjct: 314 TVLTDFLLSLVQKKY 328

Length = 328
>gnl|CDD|114493 pfam05770, Ins134_P3_kin, Inositol 1, 3, 4-trisphosphate 5/6-kinase Back     alignment and domain information
>gnl|CDD|222206 pfam13535, ATP-grasp_4, ATP-grasp domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 340
PF05770307 Ins134_P3_kin: Inositol 1, 3, 4-trisphosphate 5/6- 100.0
PLN02941328 inositol-tetrakisphosphate 1-kinase 100.0
COG0189318 RimK Glutathione synthase/Ribosomal protein S6 mod 99.97
PRK10446300 ribosomal protein S6 modification protein; Provisi 99.97
TIGR02144280 LysX_arch Lysine biosynthesis enzyme LysX. The fam 99.96
TIGR00768277 rimK_fam alpha-L-glutamate ligases, RimK family. T 99.95
PF08443190 RimK: RimK-like ATP-grasp domain; InterPro: IPR013 99.94
TIGR01380312 glut_syn glutathione synthetase, prokaryotic. This 99.92
KOG1057 1018 consensus Arp2/3 complex-interacting protein VIP1/ 99.92
PRK01372304 ddl D-alanine--D-alanine ligase; Reviewed 99.91
PRK05246316 glutathione synthetase; Provisional 99.91
PRK12458338 glutathione synthetase; Provisional 99.91
TIGR01205315 D_ala_D_alaTIGR D-alanine--D-alanine ligase. but a 99.9
TIGR03103547 trio_acet_GNAT GNAT-family acetyltransferase TIGR0 99.89
PRK14571299 D-alanyl-alanine synthetase A; Provisional 99.88
PRK02471752 bifunctional glutamate--cysteine ligase/glutathion 99.85
PRK14016 727 cyanophycin synthetase; Provisional 99.85
PRK01966333 ddl D-alanyl-alanine synthetase A; Reviewed 99.84
PRK14569296 D-alanyl-alanine synthetase A; Provisional 99.84
PRK14570364 D-alanyl-alanine synthetase A; Provisional 99.84
PRK14572347 D-alanyl-alanine synthetase A; Provisional 99.83
PRK14568343 vanB D-alanine--D-lactate ligase; Provisional 99.83
TIGR02068 864 cya_phycin_syn cyanophycin synthetase. Cyanophycin 99.82
TIGR01435737 glu_cys_lig_rel glutamate--cysteine ligase/gamma-g 99.79
PF07478203 Dala_Dala_lig_C: D-ala D-ala ligase C-terminus; In 99.79
TIGR02291317 rimK_rel_E_lig alpha-L-glutamate ligase-related pr 99.78
PRK14573809 bifunctional D-alanyl-alanine synthetase A/UDP-N-a 99.73
TIGR01161352 purK phosphoribosylaminoimidazole carboxylase, Pur 99.71
TIGR01142380 purT phosphoribosylglycinamide formyltransferase 2 99.71
COG1181317 DdlA D-alanine-D-alanine ligase and related ATP-gr 99.69
PRK06019372 phosphoribosylaminoimidazole carboxylase ATPase su 99.67
PF13535184 ATP-grasp_4: ATP-grasp domain; PDB: 3VMM_A 3LN6_A 99.66
PRK12767326 carbamoyl phosphate synthase-like protein; Provisi 99.64
PRK07206416 hypothetical protein; Provisional 99.64
PLN02948 577 phosphoribosylaminoimidazole carboxylase 99.62
PRK05294 1066 carB carbamoyl phosphate synthase large subunit; R 99.62
PRK06849389 hypothetical protein; Provisional 99.61
PRK09288395 purT phosphoribosylglycinamide formyltransferase 2 99.61
TIGR01369 1050 CPSaseII_lrg carbamoyl-phosphate synthase, large s 99.6
PRK08462 445 biotin carboxylase; Validated 99.58
PRK12833 467 acetyl-CoA carboxylase biotin carboxylase subunit; 99.56
PRK05586 447 biotin carboxylase; Validated 99.56
PRK02186 887 argininosuccinate lyase; Provisional 99.56
PRK13790379 phosphoribosylamine--glycine ligase; Provisional 99.53
TIGR00514 449 accC acetyl-CoA carboxylase, biotin carboxylase su 99.53
PRK08654 499 pyruvate carboxylase subunit A; Validated 99.53
PLN02735 1102 carbamoyl-phosphate synthase 99.52
PRK08463 478 acetyl-CoA carboxylase subunit A; Validated 99.52
PRK07178 472 pyruvate carboxylase subunit A; Validated 99.51
PRK08591 451 acetyl-CoA carboxylase biotin carboxylase subunit; 99.5
PLN02735 1102 carbamoyl-phosphate synthase 99.49
PRK12815 1068 carB carbamoyl phosphate synthase large subunit; R 99.49
PRK05294 1066 carB carbamoyl phosphate synthase large subunit; R 99.47
TIGR01369 1050 CPSaseII_lrg carbamoyl-phosphate synthase, large s 99.46
PRK00885420 phosphoribosylamine--glycine ligase; Provisional 99.46
TIGR01235 1143 pyruv_carbox pyruvate carboxylase. This enzyme pla 99.46
PRK12815 1068 carB carbamoyl phosphate synthase large subunit; R 99.43
PRK06524 493 biotin carboxylase-like protein; Validated 99.42
PRK06111 450 acetyl-CoA carboxylase biotin carboxylase subunit; 99.42
PLN02257 434 phosphoribosylamine--glycine ligase 99.39
PF02655161 ATP-grasp_3: ATP-grasp domain; InterPro: IPR003806 99.38
PRK12999 1146 pyruvate carboxylase; Reviewed 99.36
PRK13789426 phosphoribosylamine--glycine ligase; Provisional 99.35
TIGR00877 423 purD phosphoribosylamine--glycine ligase. This enz 99.33
PF15632329 ATPgrasp_Ter: ATP-grasp in the biosynthetic pathwa 99.31
TIGR02712 1201 urea_carbox urea carboxylase. Members of this fami 99.28
COG0458400 CarB Carbamoylphosphate synthase large subunit (sp 99.26
PRK06395 435 phosphoribosylamine--glycine ligase; Provisional 99.25
COG0439 449 AccC Biotin carboxylase [Lipid metabolism] 99.16
PF02750203 Synapsin_C: Synapsin, ATP binding domain; InterPro 99.13
COG0027394 PurT Formate-dependent phosphoribosylglycinamide f 99.02
PF02786211 CPSase_L_D2: Carbamoyl-phosphate synthase L chain, 99.01
PRK05784 486 phosphoribosylamine--glycine ligase; Provisional 98.97
PF02955173 GSH-S_ATP: Prokaryotic glutathione synthetase, ATP 98.97
COG1821307 Predicted ATP-utilizing enzyme (ATP-grasp superfam 98.97
PF14398262 ATPgrasp_YheCD: YheC/D like ATP-grasp 98.94
COG0026375 PurK Phosphoribosylaminoimidazole carboxylase (NCA 98.8
PRK13278358 purP 5-formaminoimidazole-4-carboxamide-1-(beta)-D 98.75
KOG3895488 consensus Synaptic vesicle protein Synapsin [Signa 98.74
PF02222172 ATP-grasp: ATP-grasp domain; InterPro: IPR003135 T 98.73
COG2232389 Predicted ATP-dependent carboligase related to bio 98.71
PRK13277366 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribo 98.7
PF14397285 ATPgrasp_ST: Sugar-transfer associated ATP-grasp 98.66
COG3919415 Predicted ATP-grasp enzyme [General function predi 98.55
KOG0238 670 consensus 3-Methylcrotonyl-CoA carboxylase, biotin 98.53
PF03133292 TTL: Tubulin-tyrosine ligase family; InterPro: IPR 98.43
), forming GARS-AIRS-GART. This entry represents the A-domain of the enzyme, and is related to the ATP-grasp domain of biotin carboxylase/carbamoyl phosphate synthetase.; PDB: 1GSO_A 3LP8_A 2IP4_A 1VKZ_A 2QK4_A 2XD4_A 2XCL_A 3MJF_A 2YRW_A 2YS6_A ...." target="_blank" href="http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PF01071">PF01071194 GARS_A: Phosphoribosylglycinamide synthetase, ATP- 98.23
COG0151428 PurD Phosphoribosylamine-glycine ligase [Nucleotid 98.22
COG4770 645 Acetyl/propionyl-CoA carboxylase, alpha subunit [L 98.22
COG1038 1149 PycA Pyruvate carboxylase [Energy production and c 98.08
KOG0369 1176 consensus Pyruvate carboxylase [Energy production 97.62
KOG0370 1435 consensus Multifunctional pyrimidine synthesis pro 97.3
PF14305239 ATPgrasp_TupA: TupA-like ATPgrasp 97.18
TIGR01016 386 sucCoAbeta succinyl-CoA synthetase, beta subunit. 97.08
PRK00696 388 sucC succinyl-CoA synthetase subunit beta; Provisi 96.89
PF14403445 CP_ATPgrasp_2: Circularly permuted ATP-grasp type 96.45
KOG2156 662 consensus Tubulin-tyrosine ligase-related protein 96.37
PF14243130 DUF4343: Domain of unknown function (DUF4343) 96.01
KOG2157 497 consensus Predicted tubulin-tyrosine ligase [Postt 95.93
KOG0368 2196 consensus Acetyl-CoA carboxylase [Lipid transport 95.3
PF13549222 ATP-grasp_5: ATP-grasp domain; PDB: 1WR2_A. 95.01
KOG0237 788 consensus Glycinamide ribonucleotide synthetase (G 93.05
PHA02117397 glutathionylspermidine synthase domain-containing 92.0
PF08442202 ATP-grasp_2: ATP-grasp domain; InterPro: IPR013650 91.52
PF07065299 D123: D123; InterPro: IPR009772 This family contai 89.69
PF02951119 GSH-S_N: Prokaryotic glutathione synthetase, N-ter 89.59
PRK14046 392 malate--CoA ligase subunit beta; Provisional 89.01
PRK10507619 bifunctional glutathionylspermidine amidase/glutat 88.26
COG0045 387 SucC Succinyl-CoA synthetase, beta subunit [Energy 84.23
COG1759361 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofu 80.87
>PF05770 Ins134_P3_kin: Inositol 1, 3, 4-trisphosphate 5/6-kinase; InterPro: IPR008656 This entry represents inositol-tetrakisphosphate 1-kinase which is also called inositol 1,3,4-trisphosphate 5/6-kinase Back     alignment and domain information 
Probab=100.00  E-value=3.8e-83  Score=606.57  Aligned_cols=301  Identities=53%  Similarity=0.955  Sum_probs=248.3

Q ss_pred             CCcEEEEEEecCCCcccccchHHHHHHHhCCCEEEEecCCCCCCCCCCccEEEEccCchhhHHHHHHHHHhCCCeeecCh
Q 019509           26 PERLVVGYALTSKKKKSFLQPKLEILARNKGISFVAIDQNRPLSDQGPFDVVLHKLSGMEWCKIIEDYRQKHPEVTILDP  105 (340)
Q Consensus        26 ~~~~~VG~~~~~kK~~~~~~~~l~~~a~~~gi~~~~id~~~~l~~q~~~DvilhK~t~~~~~~~l~~~~~~~p~v~ViDp  105 (340)
                      +++++|||||+|||+++|.|++|+.+|+++||++++||+++||++|||||+||||+|+..|.+.+++|.++||+++||||
T Consensus         5 ~~~~~VGy~l~~kK~~~~~~~~~~~~~~~~gi~~v~id~~~pl~~QgpfDvIlHKltd~~~~~~l~~y~~~hP~v~viDp   84 (307)
T PF05770_consen    5 RKRFRVGYALSPKKQKSFIQPSFIDLARSRGIDFVPIDLSKPLEEQGPFDVILHKLTDEDWVQQLEEYIKKHPEVVVIDP   84 (307)
T ss_dssp             GTT-EEEEE--HHHHHHHCCCHHCCCCCCCTTEEEEEECCSSSGCC--SCEEEE--CHCHHHHHHHHHHHH-TTSEEET-
T ss_pred             ccceEEEEEECHHHHHHhhHHHHHHHHHhcCCEEEEcCCCCCcccCCCcEEEEEeCCCHHHHHHHHHHHHHCCCeEEEcC
Confidence            46899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCHHHHHHHHHhccccCCCCccccCcEEEEecCCCChhhHHHhhCCCCcEEEecCCCCCCCcceeeEEEeChh
Q 019509          106 PDAIKHLHNRQSMLQDVADLNLSDCNGKVRVPRQMVITKDSLSIPDQVFEAGLKLPLVAKPLVVDGSAKSHELFLAYDRF  185 (340)
Q Consensus       106 ~~si~~~~dR~~~~~~L~~~~~~~~~~~I~~P~~~~~~~~~~~~~~~l~~~~l~~PvVvKP~~a~Gs~~sh~m~iv~~~~  185 (340)
                      +++|+.++||..|++.|.++....+...|.+|+++++..+.+++.+.+.+++|+||+||||++||||+.||.|+||++++
T Consensus        85 ~~~i~~l~dR~~~~~~l~~l~~~~~~~~i~~P~~v~i~~~~~~~~~~l~~agL~fPlI~KPlvA~Gsa~SH~Maivf~~~  164 (307)
T PF05770_consen   85 PDAIRPLLDRQSMLQVLSELELSEGDGRIRVPKFVVINSDAESLPELLKEAGLKFPLICKPLVACGSADSHKMAIVFNEE  164 (307)
T ss_dssp             HHHHHHHCCHHCCHHHHHHHHHHHTCTTEE-S-EEEESSSHCCHHHHHHCTTS-SSEEEEESB-SSTSCCCEEEEE-SGG
T ss_pred             HHHHHHHHCHHHHHHHHHHhhccccCCcccCCceEEEcCCHHHHHHHHHHCCCcccEEeeehhhcCCccceEEEEEECHH
Confidence            99999999999999999987666666789999999997666677788888999999999999999999999999999999


Q ss_pred             hhhccCCCeEEEecccCCCeEEEEEEECCEEEEEEeecCCCccchhhhccceeeecccccccccccCCCCCC--CCCCCC
Q 019509          186 SLSELEPPMLLQEFVNHGGILFKIYIIGETIKVVRRFSLPNVSKRELAKVVSVFRFPRVSSAAASADDADLD--PGIAEL  263 (340)
Q Consensus       186 ~L~~l~~p~v~QEfI~h~G~~~KV~ViG~~v~~~~R~sl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  263 (340)
                      +|+++++|||+||||||+|++|||||||++++++.|+|+||++.++.....+.|+|+++|+.++.+..+.++  +...++
T Consensus       165 gL~~L~~P~VlQeFVNHggvLfKVyVvGd~v~~v~R~SLpn~~~~~~~~~~~~f~~~~vs~~~~~~~~~~~d~~~~~~~~  244 (307)
T PF05770_consen  165 GLKDLKPPCVLQEFVNHGGVLFKVYVVGDKVFVVKRPSLPNVSSGKLDREEIFFDFHQVSKLESSSDLSDLDKDPSQVEM  244 (307)
T ss_dssp             GGTT--SSEEEEE----TTEEEEEEEETTEEEEEEEE------SSS-TCGGCCCEGGGTCSTTTSSGGGSBSS-TTTTTS
T ss_pred             HHhhcCCCEEEEEeecCCCEEEEEEEecCEEEEEECCCCCCCCcccccccccceeccccCCccccCchhhcccCcccccC
Confidence            999999999999999999999999999999999999999999877665567889999999988776665555  455678


Q ss_pred             CChhHHHHHHHHHHHHhCCcEeEEEEEEecCcCCeEEEEeccCCCCCCCccccHHHHHHHHHH
Q 019509          264 PPRPLLERLARELRHRLGLRLFNIDMIREHGMRDVFYVIDINYFPGYGKMPDYEHIFTDFLLS  326 (340)
Q Consensus       264 p~~~~~~~lA~~~~~~lGl~l~GvDvi~~~~~g~~~~ViEVN~fPg~~g~~~~~~~l~~~l~~  326 (340)
                      |+.+.++++|..++++|||+|||||+|++++|+++||||||||||||+|+|+|+..|+++|++
T Consensus       245 p~~~~v~~la~~LR~~lgL~LFgfDvI~~~~t~~~~~VIDINyFPgY~~vp~f~~~l~~~~~~  307 (307)
T PF05770_consen  245 PPDELVEKLAKELRRALGLTLFGFDVIRENGTGGRYYVIDINYFPGYKKVPDFESVLTDFILD  307 (307)
T ss_dssp             --HHHHHHHHHHHHHHHT-SEEEEEEEEGCCT-SSEEEEEEEES--TTTSCTHHHHHHHHHH-
T ss_pred             CCHHHHHHHHHHHHHHhCcceeeeEEEEEcCCCCcEEEEEeccCCCccCCCChHHHHHHHhhC
Confidence            888999999999999999999999999999986689999999999999999999999999874

Inositol-tetrakisphosphate 1-kinase can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3. This enzyme phosphorylates Ins(3,4,5,6)P4 at position 1 to form Ins(1,3,4,5,6)P5. This reaction is thought to have regulatory importance, since Ins(3,4,5,6)P4 is an inhibitor of plasma membrane Ca(2+)-activated Cl(-) channels, while Ins(1,3,4,5,6)P5 is not. It also phosphorylates Ins(1,3,4)P3 on O-5 and O-6 to form Ins(1,3,4,6)P4, an essential molecule in the hexakisphosphate (InsP6) pathway [, , , , ].; GO: 0000287 magnesium ion binding, 0005524 ATP binding, 0047325 inositol tetrakisphosphate 1-kinase activity, 0052725 inositol-1,3,4-trisphosphate 6-kinase activity, 0052726 inositol-1,3,4-trisphosphate 5-kinase activity, 0032957 inositol trisphosphate metabolic process, 0005622 intracellular; PDB: 1Z2P_X 1Z2O_X 1Z2N_X 2Q7D_A 2QB5_B 2ODT_X.
>PLN02941 inositol-tetrakisphosphate 1-kinase Back     alignment and domain information
>COG0189 RimK Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK10446 ribosomal protein S6 modification protein; Provisional Back     alignment and domain information
>TIGR02144 LysX_arch Lysine biosynthesis enzyme LysX Back     alignment and domain information
>TIGR00768 rimK_fam alpha-L-glutamate ligases, RimK family Back     alignment and domain information
>PF08443 RimK: RimK-like ATP-grasp domain; InterPro: IPR013651 This ATP-grasp domain is found in the ribosomal S6 modification enzyme RimK [] Back     alignment and domain information
>TIGR01380 glut_syn glutathione synthetase, prokaryotic Back     alignment and domain information
>KOG1057 consensus Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton [Cytoskeleton] Back     alignment and domain information
>PRK01372 ddl D-alanine--D-alanine ligase; Reviewed Back     alignment and domain information
>PRK05246 glutathione synthetase; Provisional Back     alignment and domain information
>PRK12458 glutathione synthetase; Provisional Back     alignment and domain information
>TIGR01205 D_ala_D_alaTIGR D-alanine--D-alanine ligase Back     alignment and domain information
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103 Back     alignment and domain information
>PRK14571 D-alanyl-alanine synthetase A; Provisional Back     alignment and domain information
>PRK02471 bifunctional glutamate--cysteine ligase/glutathione synthetase; Provisional Back     alignment and domain information
>PRK14016 cyanophycin synthetase; Provisional Back     alignment and domain information
>PRK01966 ddl D-alanyl-alanine synthetase A; Reviewed Back     alignment and domain information
>PRK14569 D-alanyl-alanine synthetase A; Provisional Back     alignment and domain information
>PRK14570 D-alanyl-alanine synthetase A; Provisional Back     alignment and domain information
>PRK14572 D-alanyl-alanine synthetase A; Provisional Back     alignment and domain information
>PRK14568 vanB D-alanine--D-lactate ligase; Provisional Back     alignment and domain information
>TIGR02068 cya_phycin_syn cyanophycin synthetase Back     alignment and domain information
>TIGR01435 glu_cys_lig_rel glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type Back     alignment and domain information
>PF07478 Dala_Dala_lig_C: D-ala D-ala ligase C-terminus; InterPro: IPR011095 This entry represents the C-terminal, catalytic domain of the D-alanine--D-alanine ligase enzyme 6 Back     alignment and domain information
>TIGR02291 rimK_rel_E_lig alpha-L-glutamate ligase-related protein Back     alignment and domain information
>PRK14573 bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase; Provisional Back     alignment and domain information
>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein Back     alignment and domain information
>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2 Back     alignment and domain information
>COG1181 DdlA D-alanine-D-alanine ligase and related ATP-grasp enzymes [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed Back     alignment and domain information
>PF13535 ATP-grasp_4: ATP-grasp domain; PDB: 3VMM_A 3LN6_A 3LN7_B 2PN1_A 4DIM_A Back     alignment and domain information
>PRK12767 carbamoyl phosphate synthase-like protein; Provisional Back     alignment and domain information
>PRK07206 hypothetical protein; Provisional Back     alignment and domain information
>PLN02948 phosphoribosylaminoimidazole carboxylase Back     alignment and domain information
>PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed Back     alignment and domain information
>PRK06849 hypothetical protein; Provisional Back     alignment and domain information
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated Back     alignment and domain information
>TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit Back     alignment and domain information
>PRK08462 biotin carboxylase; Validated Back     alignment and domain information
>PRK12833 acetyl-CoA carboxylase biotin carboxylase subunit; Provisional Back     alignment and domain information
>PRK05586 biotin carboxylase; Validated Back     alignment and domain information
>PRK02186 argininosuccinate lyase; Provisional Back     alignment and domain information
>PRK13790 phosphoribosylamine--glycine ligase; Provisional Back     alignment and domain information
>TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase subunit Back     alignment and domain information
>PRK08654 pyruvate carboxylase subunit A; Validated Back     alignment and domain information
>PLN02735 carbamoyl-phosphate synthase Back     alignment and domain information
>PRK08463 acetyl-CoA carboxylase subunit A; Validated Back     alignment and domain information
>PRK07178 pyruvate carboxylase subunit A; Validated Back     alignment and domain information
>PRK08591 acetyl-CoA carboxylase biotin carboxylase subunit; Validated Back     alignment and domain information
>PLN02735 carbamoyl-phosphate synthase Back     alignment and domain information
>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed Back     alignment and domain information
>PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed Back     alignment and domain information
>TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit Back     alignment and domain information
>PRK00885 phosphoribosylamine--glycine ligase; Provisional Back     alignment and domain information
>TIGR01235 pyruv_carbox pyruvate carboxylase Back     alignment and domain information
>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed Back     alignment and domain information
>PRK06524 biotin carboxylase-like protein; Validated Back     alignment and domain information
>PRK06111 acetyl-CoA carboxylase biotin carboxylase subunit; Validated Back     alignment and domain information
>PLN02257 phosphoribosylamine--glycine ligase Back     alignment and domain information
>PF02655 ATP-grasp_3: ATP-grasp domain; InterPro: IPR003806 The ATP-grasp fold is one of several distinct ATP-binding folds, and is found in enzymes that catalyze the formation of amide bonds, catalyzing the ATP-dependent ligation of a carboxylate-containing molecule to an amino or thiol group-containing molecule [] Back     alignment and domain information
>PRK12999 pyruvate carboxylase; Reviewed Back     alignment and domain information
>PRK13789 phosphoribosylamine--glycine ligase; Provisional Back     alignment and domain information
>TIGR00877 purD phosphoribosylamine--glycine ligase Back     alignment and domain information
>PF15632 ATPgrasp_Ter: ATP-grasp in the biosynthetic pathway with Ter operon Back     alignment and domain information
>TIGR02712 urea_carbox urea carboxylase Back     alignment and domain information
>COG0458 CarB Carbamoylphosphate synthase large subunit (split gene in MJ) [Amino acid transport and metabolism / Nucleotide transport and metabolism] Back     alignment and domain information
>PRK06395 phosphoribosylamine--glycine ligase; Provisional Back     alignment and domain information
>COG0439 AccC Biotin carboxylase [Lipid metabolism] Back     alignment and domain information
>PF02750 Synapsin_C: Synapsin, ATP binding domain; InterPro: IPR020898 The synapsins are a family of neuron-specific phosphoproteins that coat synaptic vesicles and are involved in the binding between these vesicles and the cytoskeleton (including actin filaments) Back     alignment and domain information
>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism] Back     alignment and domain information
>PF02786 CPSase_L_D2: Carbamoyl-phosphate synthase L chain, ATP binding domain; InterPro: IPR005479 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below) Back     alignment and domain information
>PRK05784 phosphoribosylamine--glycine ligase; Provisional Back     alignment and domain information
>PF02955 GSH-S_ATP: Prokaryotic glutathione synthetase, ATP-grasp domain; InterPro: IPR004218 Prokaryotic glutathione synthetase 6 Back     alignment and domain information
>COG1821 Predicted ATP-utilizing enzyme (ATP-grasp superfamily) [General function prediction only] Back     alignment and domain information
>PF14398 ATPgrasp_YheCD: YheC/D like ATP-grasp Back     alignment and domain information
>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK13278 purP 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase; Provisional Back     alignment and domain information
>KOG3895 consensus Synaptic vesicle protein Synapsin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF02222 ATP-grasp: ATP-grasp domain; InterPro: IPR003135 The ATP-grasp domain has an unusual nucleotide-binding fold, also referred to as palmate, and is found in a superfamily of enzymes including D-alanine-D-alanine ligase, glutathione synthetase, biotin carboxylase, and carbamoyl phosphate synthetase, the ribosomal protein S6 modification enzyme (RimK), urea amidolyase, tubulin-tyrosine ligase, and three enzymes of purine biosynthesis Back     alignment and domain information
>COG2232 Predicted ATP-dependent carboligase related to biotin carboxylase [General function prediction only] Back     alignment and domain information
>PRK13277 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase-like protein; Provisional Back     alignment and domain information
>PF14397 ATPgrasp_ST: Sugar-transfer associated ATP-grasp Back     alignment and domain information
>COG3919 Predicted ATP-grasp enzyme [General function prediction only] Back     alignment and domain information
>KOG0238 consensus 3-Methylcrotonyl-CoA carboxylase, biotin-containing subunit/Propionyl-CoA carboxylase, alpha chain/Acetyl-CoA carboxylase, biotin carboxylase subunit [Lipid transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information
>PF03133 TTL: Tubulin-tyrosine ligase family; InterPro: IPR004344 Tubulins and microtubules are subjected to several post-translational modifications of which the reversible detyrosination/tyrosination of the carboxy-terminal end of most alpha-tubulins has been extensively analysed Back     alignment and domain information
>PF01071 GARS_A: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; InterPro: IPR020561 Phosphoribosylglycinamide synthetase (6 Back     alignment and domain information
>COG0151 PurD Phosphoribosylamine-glycine ligase [Nucleotide transport and metabolism] Back     alignment and domain information
>COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism] Back     alignment and domain information
>COG1038 PycA Pyruvate carboxylase [Energy production and conversion] Back     alignment and domain information
>KOG0369 consensus Pyruvate carboxylase [Energy production and conversion] Back     alignment and domain information
>KOG0370 consensus Multifunctional pyrimidine synthesis protein CAD (includes carbamoyl-phophate synthetase, aspartate transcarbamylase, and glutamine amidotransferase) [General function prediction only] Back     alignment and domain information
>PF14305 ATPgrasp_TupA: TupA-like ATPgrasp Back     alignment and domain information
>TIGR01016 sucCoAbeta succinyl-CoA synthetase, beta subunit Back     alignment and domain information
>PRK00696 sucC succinyl-CoA synthetase subunit beta; Provisional Back     alignment and domain information
>PF14403 CP_ATPgrasp_2: Circularly permuted ATP-grasp type 2 Back     alignment and domain information
>KOG2156 consensus Tubulin-tyrosine ligase-related protein [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF14243 DUF4343: Domain of unknown function (DUF4343) Back     alignment and domain information
>KOG2157 consensus Predicted tubulin-tyrosine ligase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0368 consensus Acetyl-CoA carboxylase [Lipid transport and metabolism] Back     alignment and domain information
>PF13549 ATP-grasp_5: ATP-grasp domain; PDB: 1WR2_A Back     alignment and domain information
>KOG0237 consensus Glycinamide ribonucleotide synthetase (GARS)/Aminoimidazole ribonucleotide synthetase (AIRS) [Nucleotide transport and metabolism] Back     alignment and domain information
>PHA02117 glutathionylspermidine synthase domain-containing protein Back     alignment and domain information
>PF08442 ATP-grasp_2: ATP-grasp domain; InterPro: IPR013650 The ATP-grasp superfamily currently includes 17 groups of enzymes, catalyzing ATP-dependent ligation of a carboxylate containing molecule to an amino or thiol group-containing molecule [] Back     alignment and domain information
>PF07065 D123: D123; InterPro: IPR009772 This family contains a number of eukaryotic D123 proteins approximately 330 residues long Back     alignment and domain information
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6 Back     alignment and domain information
>PRK14046 malate--CoA ligase subunit beta; Provisional Back     alignment and domain information
>PRK10507 bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase; Provisional Back     alignment and domain information
>COG0045 SucC Succinyl-CoA synthetase, beta subunit [Energy production and conversion] Back     alignment and domain information
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query340
2qb5_A347 Crystal Structure Of Human Inositol 1,3,4-Trisphosp 2e-23
2q7d_A346 Crystal Structure Of Human Inositol 1,3,4-Trisphosp 3e-23
2odt_X328 Structure Of Human Inositol 1,3,4-Trisphosphate 56- 2e-22
1z2n_X324 Inositol 1,3,4-trisphosphate 5/6-kinase Complexed M 5e-05
>pdb|2QB5|A Chain A, Crystal Structure Of Human Inositol 1,3,4-Trisphosphate 56-Kinase (Itpk1) In Complex With Adp And Mn2+ Length = 347 Back     alignment and structure 
Iteration: 1

 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 130/308 (42%), Gaps = 18/308 (5%)
Query: 31  VGYALTSKKKKSFLQPKLEILARNKGISFVAIDQNRPLSDQGPFDVVLHKLS-------- 82
           VGY L+ KK K         L R +G+  V ++ +RP+ +QGP DV++HKL+        
Sbjct: 22  VGYWLSEKKIKKLNFQAFAELCRKRGMEVVQLNLSRPIEEQGPLDVIIHKLTDVILEADQ 81
Query: 83  ----GMEWCKIIEDYRQKHPEVTILDPPDAIKHLHNRQSMLQDVADLNLSDCNGKVRVPR 138
                +E     ++Y   HPE  +LDP  AI+ L +R    + +  +     + ++  P 
Sbjct: 82  NDSQSLELVHRFQEYIDAHPETIVLDPLPAIRTLLDRSKSYELIRKIEAYMEDDRICSPP 141
Query: 139 QMVITKDSLSIPDQVFEAGXXXXXXXXXXXXDGSAKSHELFLAYDRFSLSELEPPMLLQE 198
            M +T        ++ E                   SHE+ + +++  L+ ++PP ++Q 
Sbjct: 142 FMELTSLCGDDTMRLLEKNGLTFPFICKTRVAHGTNSHEMAIVFNQEGLNAIQPPCVVQN 201
Query: 199 FVNHGGILFKIYIIGETIKVVRRFSLPNVSKRELAKXXXXXXXXXXXXXXXXXXXXXLD- 257
           F+NH  +L+K++++GE+  VV+R SL N S     +                     LD 
Sbjct: 202 FINHNAVLYKVFVVGESYTVVQRPSLKNFSAGTSDRESIFFNSHNVSKPESSSVLTELDK 261
Query: 258 -PGIAXXXXXXXXXXXXXXXXXXXXXXXFNIDMIREHGMRDVFYVIDINYFPGYGKMPDY 316
             G+                        F ID+I  +       VIDIN FPGY  + ++
Sbjct: 262 IEGVFERPSDEVIRELSRALRQALGVSLFGIDIII-NNQTGQHAVIDINAFPGYEGVSEF 320
Query: 317 EHIFTDFL 324
              FTD L
Sbjct: 321 ---FTDLL 325
>pdb|2Q7D|A Chain A, Crystal Structure Of Human Inositol 1,3,4-Trisphosphate 56-Kinase (Itpk1) In Complex With Amppnp And Mn2+ Length = 346 Back     alignment and structure
>pdb|2ODT|X Chain X, Structure Of Human Inositol 1,3,4-Trisphosphate 56-Kinase Length = 328 Back     alignment and structure
>pdb|1Z2N|X Chain X, Inositol 1,3,4-trisphosphate 5/6-kinase Complexed Mg2+/adp Length = 324 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query340
2q7d_A346 Inositol-tetrakisphosphate 1-kinase; inositol kina 1e-109
1z2n_X324 Inositol 1,3,4-trisphosphate 5/6-kinase; inositol 6e-98
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-11
1uc8_A280 LYSX, lysine biosynthesis enzyme; alpha-aminoadipa 3e-04
2pn1_A331 Carbamoylphosphate synthase large subunit; ZP_0053 7e-04
>2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1, inositol 1,3,4-5/6 phosphate, inositol phosphate, inositolphosphate; HET: ANP; 1.60A {Homo sapiens} PDB: 2qb5_A* 2odt_X Length = 346 Back     alignment and structure
 Score =  322 bits (826), Expect = e-109
 Identities = 95/329 (28%), Positives = 162/329 (49%), Gaps = 17/329 (5%)

Query: 26  PERLVVGYALTSKKKKSFLQPKLEILARNKGISFVAIDQNRPLSDQGPFDVVLHKLS--- 82
            +   VGY L+ KK K         L R +G+  V ++ +RP+ +QGP DV++HKL+   
Sbjct: 16  LKGKRVGYWLSEKKIKKLNFQAFAELCRKRGMEVVQLNLSRPIEEQGPLDVIIHKLTDVI 75

Query: 83  ---------GMEWCKIIEDYRQKHPEVTILDPPDAIKHLHNRQSMLQDVADLNLSDCNGK 133
                     +E     ++Y   HPE  +LDP  AI+ L +R    + +  +     + +
Sbjct: 76  LEADQNDSQSLELVHRFQEYIDAHPETIVLDPLPAIRTLLDRSKSYELIRKIEAYMEDDR 135

Query: 134 VRVPRQMVITK-DSLSIPDQVFEAGLKLPLVAKPLVVDGSAKSHELFLAYDRFSLSELEP 192
           +  P  M +T          + + GL  P + K  V  G+  SHE+ + +++  L+ ++P
Sbjct: 136 ICSPPFMELTSLCGDDTMRLLEKNGLTFPFICKTRVAHGT-NSHEMAIVFNQEGLNAIQP 194

Query: 193 PMLLQEFVNHGGILFKIYIIGETIKVVRRFSLPNVSKRELAKVVSVFRFPRVSSAAASAD 252
           P ++Q F+NH  +L+K++++GE+  VV+R SL N S     +    F    VS   +S+ 
Sbjct: 195 PCVVQNFINHNAVLYKVFVVGESYTVVQRPSLKNFSAGTSDRESIFFNSHNVSKPESSSV 254

Query: 253 DADLDP--GIAELPPRPLLERLARELRHRLGLRLFNIDMIREHGMRDVFYVIDINYFPGY 310
             +LD   G+ E P   ++  L+R LR  LG+ LF ID+I  +       VIDIN FPGY
Sbjct: 255 LTELDKIEGVFERPSDEVIRELSRALRQALGVSLFGIDIIINNQTGQ-HAVIDINAFPGY 313

Query: 311 GKMPDYEHIFTDFLLSLEQSKCRKRPATA 339
             + ++     + + ++ Q +     AT 
Sbjct: 314 EGVSEFFTDLLNHIATVLQGQSTAMAATG 342
>1z2n_X Inositol 1,3,4-trisphosphate 5/6-kinase; inositol phosphate kinase, ATP-grAsp, transferase; HET: ADP; 1.20A {Entamoeba histolytica} PDB: 1z2o_X* 1z2p_X* Length = 324 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A* Length = 280 Back     alignment and structure
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum} Length = 331 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query340
2q7d_A346 Inositol-tetrakisphosphate 1-kinase; inositol kina 100.0
3t7a_A330 Inositol pyrophosphate kinase; ATP-grAsp fold, tra 100.0
1z2n_X324 Inositol 1,3,4-trisphosphate 5/6-kinase; inositol 100.0
1i7n_A309 Synapsin II; synapse, phosphorylation, neuropeptid 99.97
2p0a_A344 Synapsin-3, synapsin III; neurotransmitter release 99.97
1pk8_A422 RAT synapsin I; ATP binding, ATP grAsp, calcium (I 99.97
1uc8_A280 LYSX, lysine biosynthesis enzyme; alpha-aminoadipa 99.92
4eg0_A317 D-alanine--D-alanine ligase; structural genomics, 99.92
3r5x_A307 D-alanine--D-alanine ligase; alpha-beta structure, 99.91
3se7_A346 VANA; alpha-beta structure, D-alanine-D-lactate li 99.9
1iow_A306 DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen pho 99.9
3ln6_A750 Glutathione biosynthesis bifunctional protein GSH; 99.88
1ehi_A377 LMDDL2, D-alanine:D-lactate ligase; ATP-binding. g 99.87
2i87_A364 D-alanine-D-alanine ligase; APO; 2.00A {Staphyloco 99.87
3k3p_A383 D-alanine--D-alanine ligase; D-alanyl-alanine synt 99.86
4fu0_A357 D-alanine--D-alanine ligase 7; vancomycin resistan 99.86
1e4e_A343 Vancomycin/teicoplanin A-type resistance protein; 99.85
2fb9_A322 D-alanine:D-alanine ligase; 1.90A {Thermus caldoph 99.85
3i12_A364 D-alanine-D-alanine ligase A; D-alanyl-alanine syn 99.85
3tqt_A372 D-alanine--D-alanine ligase; cell envelope; 1.88A 99.85
3e5n_A386 D-alanine-D-alanine ligase A; bacterial blight; 2. 99.85
3ln7_A757 Glutathione biosynthesis bifunctional protein GSH; 99.85
2pvp_A367 D-alanine-D-alanine ligase; 2.40A {Helicobacter py 99.84
3lwb_A373 D-alanine--D-alanine ligase; DDL, D-alanyl--D-alan 99.82
1gsa_A316 Glutathione synthetase; ligase; HET: ADP GSH; 2.00 99.8
3ax6_A380 Phosphoribosylaminoimidazole carboxylase, ATPase; 99.74
3vot_A 425 L-amino acid ligase, BL00235; ATP-grAsp motif, ATP 99.73
3q2o_A389 Phosphoribosylaminoimidazole carboxylase, ATPase; 99.73
3aw8_A369 PURK, phosphoribosylaminoimidazole carboxylase, AT 99.72
4dim_A403 Phosphoribosylglycinamide synthetase; structural g 99.72
3k5i_A403 Phosphoribosyl-aminoimidazole carboxylase; purine 99.71
4ffl_A363 PYLC; amino acid, biosynthesis of pyrrolysine, iso 99.71
3orq_A377 N5-carboxyaminoimidazole ribonucleotide synthetas; 99.71
2z04_A365 Phosphoribosylaminoimidazole carboxylase ATPase su 99.69
1kjq_A391 GART 2, phosphoribosylglycinamide formyltransferas 99.69
4e4t_A419 Phosphoribosylaminoimidazole carboxylase, ATPase; 99.68
2dwc_A 433 PH0318, 433AA long hypothetical phosphoribosylglyc 99.67
3eth_A355 Phosphoribosylaminoimidazole carboxylase ATPase su 99.67
3df7_A305 Putative ATP-grAsp superfamily protein; putative p 99.65
2r85_A334 PURP protein PF1517; ATP-grAsp superfamily, unknow 99.63
3ouz_A 446 Biotin carboxylase; structural genomics, center fo 99.62
2pn1_A331 Carbamoylphosphate synthase large subunit; ZP_0053 99.6
1a9x_A 1073 Carbamoyl phosphate synthetase (large chain); amid 99.58
1a9x_A 1073 Carbamoyl phosphate synthetase (large chain); amid 99.57
3lp8_A442 Phosphoribosylamine-glycine ligase; ssgcid, NIH, n 99.56
2dzd_A 461 Pyruvate carboxylase; biotin carboxylase, ligase; 99.56
2vpq_A 451 Acetyl-COA carboxylase; bacteria, ATP-grAsp domain 99.56
3vmm_A 474 Alanine-anticapsin ligase BACD; ATP-grAsp domain, 99.56
1ulz_A 451 Pyruvate carboxylase N-terminal domain; biotin car 99.56
2w70_A 449 Biotin carboxylase; ligase, ATP-binding, fatty aci 99.54
2ip4_A 417 PURD, phosphoribosylamine--glycine ligase; GAR syn 99.54
3mjf_A 431 Phosphoribosylamine--glycine ligase; structural ge 99.53
1vkz_A412 Phosphoribosylamine--glycine ligase; TM1250, struc 99.52
2yw2_A 424 Phosphoribosylamine--glycine ligase; glycinamide r 99.52
2xcl_A 422 Phosphoribosylamine--glycine ligase; GAR-SYN, ATP- 99.51
2yrx_A 451 Phosphoribosylglycinamide synthetase; glycinamide 99.51
3glk_A 540 Acetyl-COA carboxylase 2; ATP binding, alternative 99.5
3jrx_A 587 Acetyl-COA carboxylase 2; BC domain, soraphen A, a 99.48
2qk4_A 452 Trifunctional purine biosynthetic protein adenosi; 99.47
3u9t_A 675 MCC alpha, methylcrotonyl-COA carboxylase, alpha-s 99.47
3n6r_A 681 Propionyl-COA carboxylase, alpha subunit; protein 99.46
3hbl_A 1150 Pyruvate carboxylase; TIM barrel, ligase; HET: BTI 99.46
2qf7_A 1165 Pyruvate carboxylase protein; multi-domain, multi- 99.42
3va7_A 1236 KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A 99.41
1w96_A 554 ACC, acetyl-coenzyme A carboxylase; ligase, obesit 99.37
2pbz_A320 Hypothetical protein; NYSGXRC, PSI-II, IMP biosynt 99.11
2r7k_A361 5-formaminoimidazole-4-carboxamide-1-(beta)-D- rib 99.01
2cqy_A108 Propionyl-COA carboxylase alpha chain, mitochondri 98.89
3tig_A380 TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Si 98.48
1wr2_A238 Hypothetical protein PH1789; structural genomics, 98.36
3ufx_B 397 Succinyl-COA synthetase beta subunit; ATP-grAsp fo 97.54
2nu8_B 388 SCS-beta, succinyl-COA synthetase beta chain; citr 97.49
2fp4_B 395 Succinyl-COA ligase [GDP-forming] beta-chain, mito 97.28
2io8_A619 Bifunctional glutathionylspermidine synthetase/ami 97.2
2vob_A652 Trypanothione synthetase; ligase; 2.3A {Leishmania 92.49
3n6x_A474 Putative glutathionylspermidine synthase; domain o 92.08
3mwd_A 425 ATP-citrate synthase; ATP-grAsp, phosphohistidine, 85.66
>2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1, inositol 1,3,4-5/6 phosphate, inositol phosphate, inositolphosphate; HET: ANP; 1.60A {Homo sapiens} PDB: 2qb5_A* 2odt_X Back     alignment and structure
Probab=100.00  E-value=6e-60  Score=458.19  Aligned_cols=307  Identities=31%  Similarity=0.533  Sum_probs=255.7

Q ss_pred             CcEEEEEEecCCCcccccchHHHHHHHhCCCEEEEecCCCCCCCCCCccEEEEccCch------------hhHHHHHHHH
Q 019509           27 ERLVVGYALTSKKKKSFLQPKLEILARNKGISFVAIDQNRPLSDQGPFDVVLHKLSGM------------EWCKIIEDYR   94 (340)
Q Consensus        27 ~~~~VG~~~~~kK~~~~~~~~l~~~a~~~gi~~~~id~~~~l~~q~~~DvilhK~t~~------------~~~~~l~~~~   94 (340)
                      .+++|||||++||.++|.+++|+++++++|++++.||+++++..|++||++|||+++.            .+++.+++|.
T Consensus        17 ~~~~vG~~l~~kk~~~~~~~~l~~al~~~G~~~~~iD~~~~~~~~~~~Dvvi~~l~~~~~ea~~~d~~~~~~~~~l~~~~   96 (346)
T 2q7d_A           17 KGKRVGYWLSEKKIKKLNFQAFAELCRKRGMEVVQLNLSRPIEEQGPLDVIIHKLTDVILEADQNDSQSLELVHRFQEYI   96 (346)
T ss_dssp             TTCEEEEECCHHHHHHHTHHHHHHHHHTTTCEEEECCTTSCSGGGCCCSEEEECCHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             CceEEEEEECcccchhhhHHHHHHHHHhCCcEEEEcccccchhhcCCCCEEEeCCcccccccccCchhHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999999999899999999999872            5678899998


Q ss_pred             HhCCCeeecChHHHHHHhcCHHHHHHHHHhccccCCCCccccCcEEEEecC-CCChhhHHHhhCCCCcEEEecCCCCCCC
Q 019509           95 QKHPEVTILDPPDAIKHLHNRQSMLQDVADLNLSDCNGKVRVPRQMVITKD-SLSIPDQVFEAGLKLPLVAKPLVVDGSA  173 (340)
Q Consensus        95 ~~~p~v~ViDp~~si~~~~dR~~~~~~L~~~~~~~~~~~I~~P~~~~~~~~-~~~~~~~l~~~~l~~PvVvKP~~a~Gs~  173 (340)
                      .+++|++||||+++|++|.||+.|+++|+++......+||++|+|+++.+. .++..+.+...+++||+|+||+.++||+
T Consensus        97 ~~~~gv~vinp~~ai~~~~dk~~~~~~L~k~~~~~~~~gIp~P~t~~~~~~~~~~~~~~~~~~~lg~P~VvKP~~g~Gs~  176 (346)
T 2q7d_A           97 DAHPETIVLDPLPAIRTLLDRSKSYELIRKIEAYMEDDRICSPPFMELTSLCGDDTMRLLEKNGLTFPFICKTRVAHGTN  176 (346)
T ss_dssp             HHCTTSEEESCHHHHHHTTBHHHHHHHHHHHHHHHCBTTEECCCEEEECSCCCTTHHHHHHHTTCCSSEEEECSBCSSTT
T ss_pred             HHCCCeEEcCCHHHHHHhhhHHHHHHHHHhhcccccCCCCCCCCEEEEeCCCHHHHHHHHHhcCCCCCEEEEecCCCcce
Confidence            889999999999999999999999999998543334469999999999643 2445555555689999999999989986


Q ss_pred             cceeeEEEeChhhhhccCCCeEEEecccCCCeEEEEEEECCEEEEEEeecCCCccchhhhccceeeeccc--cccccccc
Q 019509          174 KSHELFLAYDRFSLSELEPPMLLQEFVNHGGILFKIYIIGETIKVVRRFSLPNVSKRELAKVVSVFRFPR--VSSAAASA  251 (340)
Q Consensus       174 ~sh~m~iv~~~~~L~~l~~p~v~QEfI~h~G~~~KV~ViG~~v~~~~R~sl~~~~~~~~~~~~~~~~~~~--~~~~~~~~  251 (340)
                       +|+|.++++.++|..++.|+|+||||+|+|++|||||||+++++++|+|+|+|..+.  +..++|+|..  +++++..+
T Consensus       177 -s~~v~~v~~~~~l~~~~~~~lvQefI~~~G~dirv~VvG~~v~~~~r~sl~~~~~~~--~~~~~~~f~s~~~~~~g~~~  253 (346)
T 2q7d_A          177 -SHEMAIVFNQEGLNAIQPPCVVQNFINHNAVLYKVFVVGESYTVVQRPSLKNFSAGT--SDRESIFFNSHNVSKPESSS  253 (346)
T ss_dssp             -CCEEEEECSGGGTTC--CCEEEEECCCCTTEEEEEEEETTEEEEEEEECCCCCC------CCCCEEEEGGGTSSTTCCC
T ss_pred             -eeeeEEecCHHHHHhcCCCEEEEEeeCCCCeEEEEEEECCEEEEEEEecCCCcCcCc--cccccccccceeeccCCccc
Confidence             999999999999999999999999999999999999999999999999999886543  2346677664  66655432


Q ss_pred             CCCCCCC--CCCCCCChhHHHHHHHHHHHHhCCcEeEEEEEEecCcCCeEEEEeccCCCCCCCccccHHHHHHHHHHHHH
Q 019509          252 DDADLDP--GIAELPPRPLLERLARELRHRLGLRLFNIDMIREHGMRDVFYVIDINYFPGYGKMPDYEHIFTDFLLSLEQ  329 (340)
Q Consensus       252 ~~~~~~~--~~~~~p~~~~~~~lA~~~~~~lGl~l~GvDvi~~~~~g~~~~ViEVN~fPg~~g~~~~~~~l~~~l~~~i~  329 (340)
                      .....++  ...++++.++++++|.+++++||++++|||+|++.++| ++||+|||+||||+|+++++..+.++|+++++
T Consensus       254 ~~~~~~~~~~~~~~~~~~el~~lA~~a~~alGl~~~gvDii~~~~~g-~~~VlEVN~~PG~~g~~~~~~~i~~~l~~~~~  332 (346)
T 2q7d_A          254 VLTELDKIEGVFERPSDEVIRELSRALRQALGVSLFGIDIIINNQTG-QHAVIDINAFPGYEGVSEFFTDLLNHIATVLQ  332 (346)
T ss_dssp             GGGCCSCCCSCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECTTTC-CEEEEEEEESCCCTTCTTHHHHHHHHHHHHHH
T ss_pred             cccccccccccccCCChHHHHHHHHHHHHHhCCceEeeEEEeecCCC-CEEEEEEeCCccccccchHHHHHHHHHHHHhh
Confidence            1111111  12345667889999999999999999999999985444 69999999999999999999999999999998


Q ss_pred             hhcccCCC
Q 019509          330 SKCRKRPA  337 (340)
Q Consensus       330 ~~~~~~~~  337 (340)
                      +++...-+
T Consensus       333 ~~~~~~~~  340 (346)
T 2q7d_A          333 GQSTAMAA  340 (346)
T ss_dssp             HHHTTCBC
T ss_pred             ccCCCccc
Confidence            76664433
>3t7a_A Inositol pyrophosphate kinase; ATP-grAsp fold, transferase; HET: ADP; 1.70A {Homo sapiens} PDB: 3t9a_A* 3t9b_A* 3t9c_A* 3t9d_A* 3t9e_A* 3t9f_A* 4gb4_A* 4hn2_A* 3t54_A* 3t99_A* Back     alignment and structure
>1z2n_X Inositol 1,3,4-trisphosphate 5/6-kinase; inositol phosphate kinase, ATP-grAsp, transferase; HET: ADP; 1.20A {Entamoeba histolytica} PDB: 1z2o_X* 1z2p_X* Back     alignment and structure
>1i7n_A Synapsin II; synapse, phosphorylation, neuropeptide; 1.90A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1i7l_A 1auv_A 1aux_A* Back     alignment and structure
>2p0a_A Synapsin-3, synapsin III; neurotransmitter release, schizophrenia, vesicle T structural genomics, structural genomics consortium, SGC, neuropeptide; HET: ANP; 1.90A {Homo sapiens} Back     alignment and structure
>1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1px2_A* Back     alignment and structure
>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: c.30.1.6 d.142.1.7 PDB: 1uc9_A* Back     alignment and structure
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A Back     alignment and structure
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A* Back     alignment and structure
>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {} Back     alignment and structure
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A* Back     alignment and structure
>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V} Back     alignment and structure
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1 Back     alignment and structure
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A* Back     alignment and structure
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans} Back     alignment and structure
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis} Back     alignment and structure
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B* Back     alignment and structure
>2fb9_A D-alanine:D-alanine ligase; 1.90A {Thermus caldophilus} PDB: 2zdh_A* 2yzg_A 2yzn_A* 2yzm_A* 2zdg_A* 2zdq_A* Back     alignment and structure
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A* Back     alignment and structure
>3tqt_A D-alanine--D-alanine ligase; cell envelope; 1.88A {Coxiella burnetii} Back     alignment and structure
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A* Back     alignment and structure
>3ln7_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamylcysteine ligase domain, ATP-grAsp domain, HYBR enzyme, ATP-binding; 3.20A {Pasteurella multocida} Back     alignment and structure
>2pvp_A D-alanine-D-alanine ligase; 2.40A {Helicobacter pylori} Back     alignment and structure
>3lwb_A D-alanine--D-alanine ligase; DDL, D-alanyl--D-alanine ligase RV2981C, structural genomics, TB structural GENO consortium, TBSGC; 2.10A {Mycobacterium tuberculosis} Back     alignment and structure
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A Back     alignment and structure
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima} Back     alignment and structure
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis} Back     alignment and structure
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* Back     alignment and structure
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus} Back     alignment and structure
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii} Back     alignment and structure
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* Back     alignment and structure
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A* Back     alignment and structure
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A Back     alignment and structure
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A* Back     alignment and structure
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A Back     alignment and structure
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A* Back     alignment and structure
>3eth_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; ATP-grAsp, purine biosynthesis, antimicrobial, ATP-binding, decarboxylase, lyase; HET: ATP; 1.60A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1b6r_A* 3etj_A* 1b6s_A* Back     alignment and structure
>3df7_A Putative ATP-grAsp superfamily protein; putative protein, PSI-II, nysgrc., structural genomics, protein structure initiative; 1.87A {Archaeoglobus fulgidus} Back     alignment and structure
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A* Back     alignment and structure
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A* Back     alignment and structure
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum} Back     alignment and structure
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A* Back     alignment and structure
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A* Back     alignment and structure
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis} Back     alignment and structure
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans} Back     alignment and structure
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus} Back     alignment and structure
>3vmm_A Alanine-anticapsin ligase BACD; ATP-grAsp domain, amino acid ligase, ATP binding; HET: ADP P0D; 2.50A {Bacillus subtilis} Back     alignment and structure
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 Back     alignment and structure
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ... Back     alignment and structure
>2ip4_A PURD, phosphoribosylamine--glycine ligase; GAR synthetase, purine nucleotid structural genomics, NPPSFA; 2.80A {Thermus thermophilus} Back     alignment and structure
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A Back     alignment and structure
>1vkz_A Phosphoribosylamine--glycine ligase; TM1250, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 Back     alignment and structure
>2yw2_A Phosphoribosylamine--glycine ligase; glycinamide ribonucleotide synthetase, GAR synthetase, ATP B purine nucleotide biosynthetic pathway; HET: ATP; 1.80A {Aquifex aeolicus} PDB: 2yya_A Back     alignment and structure
>2xcl_A Phosphoribosylamine--glycine ligase; GAR-SYN, ATP-grAsp, metal binding; HET: ANP; 2.10A {Bacillus subtilis} PDB: 2xd4_A* Back     alignment and structure
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A Back     alignment and structure
>3glk_A Acetyl-COA carboxylase 2; ATP binding, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis, manganese; 2.10A {Homo sapiens} PDB: 3gid_A 2hjw_A 2yl2_A Back     alignment and structure
>3jrx_A Acetyl-COA carboxylase 2; BC domain, soraphen A, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis; HET: S1A; 2.50A {Homo sapiens} PDB: 3jrw_A* Back     alignment and structure
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens} Back     alignment and structure
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi} Back     alignment and structure
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A* Back     alignment and structure
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A* Back     alignment and structure
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis} Back     alignment and structure
>1w96_A ACC, acetyl-coenzyme A carboxylase; ligase, obesity, diabetes, fatty acid metabolism, structure-based drug design; HET: S1A; 1.8A {Saccharomyces cerevisiae} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1w93_A Back     alignment and structure
>2pbz_A Hypothetical protein; NYSGXRC, PSI-II, IMP biosynthesis, ATP binding protein, PURP structural genomics, protein structure initiative; HET: ATP; 2.50A {Thermococcus kodakarensis} SCOP: c.30.1.8 d.142.1.9 Back     alignment and structure
>2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} SCOP: c.30.1.8 d.142.1.9 PDB: 2r7l_A* 2r7m_A* 2r7n_A* Back     alignment and structure
>2cqy_A Propionyl-COA carboxylase alpha chain, mitochondrial; PCCA, B domain, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>3tig_A TTL protein; ATP-grAsp, ligase, tubulin; 2.50A {Silurana} PDB: 3tii_A* 3tin_A* Back     alignment and structure
>1wr2_A Hypothetical protein PH1789; structural genomics, NPPSFA, national on protein structural and functional analyses; 2.00A {Pyrococcus horikoshii} Back     alignment and structure
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus} Back     alignment and structure
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B* Back     alignment and structure
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B* Back     alignment and structure
>2io8_A Bifunctional glutathionylspermidine synthetase/amidase; ligase, hydrolase; HET: ADP; 2.10A {Escherichia coli} SCOP: c.30.1.7 d.3.1.15 d.142.1.8 PDB: 2io7_A* 2io9_A* 2ioa_A* 2iob_A 3o98_A* Back     alignment and structure
>2vob_A Trypanothione synthetase; ligase; 2.3A {Leishmania major} PDB: 2vps_A 2vpm_A Back     alignment and structure
>3n6x_A Putative glutathionylspermidine synthase; domain of unknown function (DUF404), structural genomics; 2.35A {Methylobacillus flagellatus} Back     alignment and structure
>3mwd_A ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query340
d1i7na2206 Synapsin II {Rat (Rattus norvegicus) [TaxId: 10116 99.85
d1uc8a2192 Lysine biosynthesis enzyme LysX ATP-binding domain 99.82
d1e4ea2211 D-alanine:D-lactate ligase VanA, C-domain {Enteroc 99.73
d1ehia2228 D-alanine:D-lactate ligase VanA, C-domain {Leucono 99.73
d1iowa2210 D-ala-D-ala ligase, C-domain {Escherichia coli, ge 99.71
d1gsaa2192 Prokaryotic glutathione synthetase, C-domain {Esch 99.69
d1vkza3220 Glycinamide ribonucleotide synthetase (GAR-syn), d 99.33
d2r7ka2238 5-formaminoimidazole-4-carboxamide ribonucleotide 99.32
d1a9xa5275 Carbamoyl phosphate synthetase (CPS), large subuni 99.3
d1a9xa6259 Carbamoyl phosphate synthetase (CPS), large subuni 99.3
d2r85a2235 5-formaminoimidazole-4-carboxamide ribonucleotide 99.27
d1ulza3214 Biotin carboxylase (BC), domain 2 {Aquifex aeolicu 99.23
d3etja3198 N5-carboxyaminoimidazole ribonucleotide synthetase 99.2
d1w96a3267 Acetyl-CoA carboxylase, BC-M subdomain {Baker's ye 99.18
d2j9ga3216 Biotin carboxylase (BC), domain 2 {Escherichia col 99.13
d1kjqa3206 Glycinamide ribonucleotide transformylase PurT, do 99.13
d1gsoa3224 Glycinamide ribonucleotide synthetase (GAR-syn), d 99.0
d1uc8a188 Lysine biosynthesis enzyme LysX, N-terminal domain 98.15
d2nu7b2238 Succinyl-CoA synthetase, beta-chain, N-terminal do 94.27
d1eucb2246 Succinyl-CoA synthetase, beta-chain, N-terminal do 94.07
d1gsaa1122 Prokaryotic glutathione synthetase, N-terminal dom 90.4
>d1i7na2 d.142.1.3 (A:215-420) Synapsin II {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: ATP-grasp
superfamily: Glutathione synthetase ATP-binding domain-like
family: Synapsin C-terminal domain
domain: Synapsin II
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.85  E-value=6.3e-21  Score=168.79  Aligned_cols=192  Identities=10%  Similarity=0.087  Sum_probs=123.3

Q ss_pred             ChHHHHHHhcCHHHHHHHHHhccccCCCCccccCcEEEEecCCCChhhHHHhhCCCCcEEEecCCCCCCCcceeeEEEeC
Q 019509          104 DPPDAIKHLHNRQSMLQDVADLNLSDCNGKVRVPRQMVITKDSLSIPDQVFEAGLKLPLVAKPLVVDGSAKSHELFLAYD  183 (340)
Q Consensus       104 Dp~~si~~~~dR~~~~~~L~~~~~~~~~~~I~~P~~~~~~~~~~~~~~~l~~~~l~~PvVvKP~~a~Gs~~sh~m~iv~~  183 (340)
                      |++++|++|.||..++..+..........++|++.+....    ...+  ....++||+|+||..  |+ +|+||.++.+
T Consensus         1 Ns~~si~~~~dK~~v~~~l~~~~~~l~~~~~p~~~~~~~~----~~~~--~~~~~~~PvVvKP~~--g~-~g~Gv~~v~~   71 (206)
T d1i7na2           1 NSLESIYNFCDKPWVFAQMVAIFKTLGGEKFPLIEQTYYP----NHRE--MLTLPTFPVVVKIGH--AH-SGMGKVKVEN   71 (206)
T ss_dssp             SCHHHHHHTSSHHHHHHHHHHHHHHHCTTTSCBCCCEEES----SGGG--GSSCCCSSEEEEESS--CS-TTTTEEEECS
T ss_pred             CCHHHHHHhcCcHHHHHHHHHHhcccCCCccceeeccccc----chhH--HhhhcCCceEEecCC--CC-CCCCeEEEee
Confidence            7899999999995443322211000011355666543321    1222  223578999999987  43 4789999999


Q ss_pred             hhhhhcc-------CCCeEEEecccCCCeEEEEEEECCEEEEEEeecCCCccchhhhccceeeecccccccccccCCCCC
Q 019509          184 RFSLSEL-------EPPMLLQEFVNHGGILFKIYIIGETIKVVRRFSLPNVSKRELAKVVSVFRFPRVSSAAASADDADL  256 (340)
Q Consensus       184 ~~~L~~l-------~~p~v~QEfI~h~G~~~KV~ViG~~v~~~~R~sl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (340)
                      .++|+..       ..++++||||+ ++++++|+|+|+++..+.+++..+    +|+++.        ..      ++..
T Consensus        72 ~~~l~~~~~~~~~~~~~~~vqe~I~-~~~dirv~vig~~~~~~~~~~~~~----~~~~n~--------~~------~~~~  132 (206)
T d1i7na2          72 HYDFQDIASVVALTQTYATAEPFID-AKYDIRVQKIGNNYKAYMRTSISG----NWKTNT--------GS------AMLE  132 (206)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEEECCC-EEEEEEEEEETTEEEEEEEESSCT----TTSCSC--------CC------SSEE
T ss_pred             cchhhhHHHHHhhccCeEEEEEeec-ccceEEEEEEecceeEEEeecccc----cccccc--------cc------Cccc
Confidence            9888653       67899999996 468999999999998877776432    343321        00      1111


Q ss_pred             CCCCCCCCChhHHHHHHHHHHHHh-CCcEeEEEEEEecCcCCeEEEEeccCCCCCCCcccc---HHHHHHHHHHHHHh
Q 019509          257 DPGIAELPPRPLLERLARELRHRL-GLRLFNIDMIREHGMRDVFYVIDINYFPGYGKMPDY---EHIFTDFLLSLEQS  330 (340)
Q Consensus       257 ~~~~~~~p~~~~~~~lA~~~~~~l-Gl~l~GvDvi~~~~~g~~~~ViEVN~fPg~~g~~~~---~~~l~~~l~~~i~~  330 (340)
                      .+    .+ .+..++++.++++.+ +++++|||++++. .| ++||+|||..|.+.-.+..   ...++|.+.+.+++
T Consensus       133 ~~----~~-~~~~~~~~~~~~~~~~~~~~~gvD~~~~~-dG-~~yvlEvN~~~~~~~~~~~~~~~~~i~d~v~~~~~~  203 (206)
T d1i7na2         133 QI----AM-SDRYKLWVDACSEMFGGLDICAVKAVHGK-DG-KDYIFEVMDCSMPLIGEHQVEDRQLITDLVISKMNQ  203 (206)
T ss_dssp             EE----CC-CHHHHHHHHHHTTGGGCCSEEEEEEEEET-TS-CEEEEEEECTTCCCCSSCHHHHHHHHHHHHHHHHHH
T ss_pred             cc----cC-ChHHHHHHHHHhhhccccceeeEEEEEcC-CC-CEEEEEEcCCCcccccchHHHHHHHHHHHHHHHHHH
Confidence            00    11 234567777777766 5799999999975 34 7999999998864322222   23577777776654
>d1uc8a2 d.142.1.7 (A:89-280) Lysine biosynthesis enzyme LysX ATP-binding domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1e4ea2 d.142.1.1 (A:132-342) D-alanine:D-lactate ligase VanA, C-domain {Enterococcus faecium [TaxId: 1352]} Back     information, alignment and structure
>d1ehia2 d.142.1.1 (A:135-362) D-alanine:D-lactate ligase VanA, C-domain {Leuconostoc mesenteroides, Ddl2 [TaxId: 1245]} Back     information, alignment and structure
>d1iowa2 d.142.1.1 (A:97-306) D-ala-D-ala ligase, C-domain {Escherichia coli, gene ddlB [TaxId: 562]} Back     information, alignment and structure
>d1gsaa2 d.142.1.1 (A:123-314) Prokaryotic glutathione synthetase, C-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vkza3 d.142.1.2 (A:94-313) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2r7ka2 d.142.1.9 (A:124-361) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Methanocaldococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1a9xa5 d.142.1.2 (A:128-402) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a9xa6 d.142.1.2 (A:677-935) Carbamoyl phosphate synthetase (CPS), large subunit ATP-binding domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2r85a2 d.142.1.9 (A:100-334) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1ulza3 d.142.1.2 (A:115-328) Biotin carboxylase (BC), domain 2 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d3etja3 d.142.1.2 (A:79-276) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w96a3 d.142.1.2 (A:184-450) Acetyl-CoA carboxylase, BC-M subdomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2j9ga3 d.142.1.2 (A:115-330) Biotin carboxylase (BC), domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kjqa3 d.142.1.2 (A:113-318) Glycinamide ribonucleotide transformylase PurT, domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gsoa3 d.142.1.2 (A:104-327) Glycinamide ribonucleotide synthetase (GAR-syn), domain 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1uc8a1 c.30.1.6 (A:1-88) Lysine biosynthesis enzyme LysX, N-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2nu7b2 d.142.1.4 (B:1-238) Succinyl-CoA synthetase, beta-chain, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1eucb2 d.142.1.4 (B:0-245) Succinyl-CoA synthetase, beta-chain, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1gsaa1 c.30.1.3 (A:1-122) Prokaryotic glutathione synthetase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure