Citrus Sinensis ID: 019544

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------34
MTQLISLQPFSNWKLYMISFSQIGFWQIRFTTSAKFKLELVIFFKKKNIANHTISTQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN
ccccccccccccccccEEEEccccEEEEEEEEcccccccHHHHcccccccHHHHHHHHHHHcccccccccccEEEEcHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHccccccccccccEEEccEEEEEcccccccccccEEEEEEEEccccccccccccEEEEEEccEEEcccccccccccccccHHHHHHHHHHHHccccEEEEEEcccccEEEEEccEEEEEEEccEEEcccccccccccccHHHHHHHHHHccccEEEEEEcccccccccEEcccccEEEEcccEEEEEccEEEEEcccccHHHHHHHHHHHHccccccccccccEEEcc
ccccccccEEccHHHHHcccccccccccccccccccccccHHccccccHHHHHHHHHHEEccEEEEEEcccEEEEEcHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcHHHcccccccEEEEEEEEEEccEcccccccccEEEEEEEEEEccccHHHcccEEEEEEccEEEEccccccccEccccHHHHHHHHHHHHHcccccEEEEcccccEEEEEEcccEEEEEEccEEEEccHHHcccccHHHHHHHHHHHHccccEEEcccEccHHHHccEEEEEEcccEEEEEEEEEEcccEEEEcccccHHHHHHHHHHHcccccccccccccEEEEc
mtqlislqpfsnwkLYMISFSQIGFWQIRFTTSAKFKLELVIFFKKKnianhtisTQGLFEGMKAYRkedgqlvlfrpdqnairlqtgaermcmpspsiDQFIDAVKQTALankrwvpppgkgslyirpllvgsgpilglapapeytflvfaspvgnyfkeglaplnlyvedefhratpggaggvkaISNYAPVLKAISRAknrgfsdvlYLDSVnkknleevsscnifilkgniistpatsgtilaGITRKSIIEIASdcgfqveeraipvdelleadevfcTGTAVvvapvgsityrgkriefktgaqSVSRELYSTLVGIQtglikdnkgwtvein
mtqlislqpfsNWKLYMISFSQIGFWQIRFTTSAKFKLELVIFFKKKNIANHTISTQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALAnkrwvpppgkGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKgniistpatsgtILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVvvapvgsityrgkriefktgaqsvsrELYSTLVgiqtglikdnkgwtvein
MTQLISLQPFSNWKLYMISFSQIGFWQIRFTTSAKFKLELVIFFKKKNIANHTISTQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN
****ISLQPFSNWKLYMISFSQIGFWQIRFTTSAKFKLELVIFFKKKNIANHTISTQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTV***
*TQLISLQPFSNWKLYMISFSQIGFWQIRFTTSAKFKLELVIFFKKKNIANHTISTQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN
MTQLISLQPFSNWKLYMISFSQIGFWQIRFTTSAKFKLELVIFFKKKNIANHTISTQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN
*TQLISLQPFSNWKLYMISFSQIGFWQIRFTTSAKFKLELVIFFKKKNIANHTISTQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MTQLISLQPFSNWKLYMISFSQIGFWQIRFTTSAKFKLELVIFFKKKNIANHTISTQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query339 2.2.26 [Sep-21-2011]
Q9M439388 Branched-chain-amino-acid yes no 0.834 0.729 0.759 1e-130
Q9FYA6415 Branched-chain-amino-acid no no 0.834 0.681 0.693 1e-119
Q9M401413 Branched-chain-amino-acid no no 0.834 0.685 0.684 1e-117
Q93Y32384 Branched-chain-amino-acid no no 0.831 0.734 0.687 1e-111
Q9LPM9356 Branched-chain-amino-acid no no 0.831 0.792 0.621 1e-108
Q9LPM8367 Putative branched-chain-a no no 0.831 0.768 0.625 1e-106
Q9LE06354 Methionine aminotransfera no no 0.831 0.796 0.579 1e-100
P39576363 Branched-chain-amino-acid yes no 0.831 0.776 0.425 7e-66
O31461356 Branched-chain-amino-acid no no 0.831 0.792 0.437 6e-61
Q6GJB4358 Probable branched-chain-a yes no 0.823 0.779 0.416 9e-60
>sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1 Back     alignment and function desciption
 Score =  465 bits (1196), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 215/283 (75%), Positives = 257/283 (90%)

Query: 57  QGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRW 116
           Q ++EG KAYRKE+G+L+LFRPD NAIR++ GAERM MPSPS+DQF++AVKQTALANKRW
Sbjct: 106 QAIYEGTKAYRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQTALANKRW 165

Query: 117 VPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHR 176
           VPP GKG+LYIRPLL+GSGPILGL PAPEYTF+V+ASPVGNYFKEG+A LNLYVE+E+ R
Sbjct: 166 VPPAGKGTLYIRPLLMGSGPILGLGPAPEYTFIVYASPVGNYFKEGMAALNLYVEEEYVR 225

Query: 177 ATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNII 236
           A PGGAGGVK+I+NYAPVLKA+SRAK+RGFSDVLYLDSV KK LEE SSCN+F++KG  I
Sbjct: 226 AAPGGAGGVKSITNYAPVLKALSRAKSRGFSDVLYLDSVKKKYLEEASSCNVFVVKGRTI 285

Query: 237 STPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSI 296
           STPAT+GTIL GITRKS++EIASD G+QV E+A+ VDE+++ADEVFCTGTAVVVAPVG+I
Sbjct: 286 STPATNGTILEGITRKSVMEIASDQGYQVVEKAVHVDEVMDADEVFCTGTAVVVAPVGTI 345

Query: 297 TYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN 339
           TY+ KR+E+KTG +SV ++L S LVGIQTGLI+DNKGW  +IN
Sbjct: 346 TYQEKRVEYKTGDESVCQKLRSVLVGIQTGLIEDNKGWVTDIN 388
Converts 2-oxo acids to branched-chain amino acids. Acts on leucine, isoleucine and valine.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: 4EC: 2
>sp|Q9FYA6|BCAT5_ARATH Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1 Back     alignment and function description
>sp|Q9M401|BCAT3_ARATH Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1 Back     alignment and function description
>sp|Q93Y32|BCAT1_ARATH Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2 Back     alignment and function description
>sp|Q9LPM9|BCAT6_ARATH Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1 Back     alignment and function description
>sp|Q9LPM8|BCAT7_ARATH Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1 Back     alignment and function description
>sp|Q9LE06|BCAT4_ARATH Methionine aminotransferase BCAT4 OS=Arabidopsis thaliana GN=BCAT4 PE=1 SV=1 Back     alignment and function description
>sp|P39576|ILVE2_BACSU Branched-chain-amino-acid aminotransferase 2 OS=Bacillus subtilis (strain 168) GN=ilvK PE=1 SV=5 Back     alignment and function description
>sp|O31461|ILVE1_BACSU Branched-chain-amino-acid transaminase 1 OS=Bacillus subtilis (strain 168) GN=ilvE PE=1 SV=1 Back     alignment and function description
>sp|Q6GJB4|ILVE_STAAR Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain MRSA252) GN=ilvE PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query339
255537936399 branched-chain amino acid aminotransfera 0.834 0.709 0.780 1e-132
224063417318 predicted protein [Populus trichocarpa] 0.834 0.889 0.777 1e-130
225458938387 PREDICTED: branched-chain-amino-acid ami 0.834 0.731 0.759 1e-129
15218409388 branched-chain-amino-acid aminotransfera 0.834 0.729 0.759 1e-128
186478317318 branched-chain-amino-acid aminotransfera 0.834 0.889 0.759 1e-128
302142143387 unnamed protein product [Vitis vinifera] 0.834 0.731 0.759 1e-127
449450320390 PREDICTED: branched-chain-amino-acid ami 0.834 0.725 0.770 1e-127
407317193393 mitochodrial branched-chain aminotransfe 0.834 0.720 0.749 1e-127
288310302389 branched chain amino acid transaminase [ 0.834 0.727 0.770 1e-127
297843816388 ATBCAT-2 [Arabidopsis lyrata subsp. lyra 0.834 0.729 0.745 1e-126
>gi|255537936|ref|XP_002510033.1| branched-chain amino acid aminotransferase, putative [Ricinus communis] gi|223550734|gb|EEF52220.1| branched-chain amino acid aminotransferase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  477 bits (1227), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 221/283 (78%), Positives = 258/283 (91%)

Query: 57  QGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRW 116
           QGL+EG KAYRKEDG+L+LFRPDQNAIR+Q GA+RMCMP PSIDQF+DAVKQ A +NKRW
Sbjct: 117 QGLYEGTKAYRKEDGRLLLFRPDQNAIRMQMGADRMCMPCPSIDQFVDAVKQVAFSNKRW 176

Query: 117 VPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHR 176
           VPPPGKG+LYIRPLL+GSGP+LGLAPAPEYTFLV+ASPVGNYFKEG APLNLY+E+EFHR
Sbjct: 177 VPPPGKGTLYIRPLLMGSGPVLGLAPAPEYTFLVYASPVGNYFKEGSAPLNLYIEEEFHR 236

Query: 177 ATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNII 236
           A+ GGAGGVK+I+NYAPVLKAI+RAK RGFSDVLYLD+VNKK LEEVSSCNIF++KGN+I
Sbjct: 237 ASRGGAGGVKSITNYAPVLKAIARAKGRGFSDVLYLDAVNKKYLEEVSSCNIFVVKGNVI 296

Query: 237 STPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSI 296
           S+P  +GTIL G+TR+SIIEIA D  +QVEERAIPVDEL++ADEVFCTGTAV VAPVGSI
Sbjct: 297 SSPPANGTILQGVTRRSIIEIACDLNYQVEERAIPVDELMDADEVFCTGTAVGVAPVGSI 356

Query: 297 TYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN 339
           TY+ +RIE+K  A+SVS+EL STL GI+ GLI+D KGW +E+ 
Sbjct: 357 TYQDRRIEYKIRAESVSQELQSTLEGIKRGLIEDKKGWILEMQ 399

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224063417|ref|XP_002301136.1| predicted protein [Populus trichocarpa] gi|222842862|gb|EEE80409.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225458938|ref|XP_002285511.1| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic [Vitis vinifera] gi|302142142|emb|CBI19345.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|15218409|ref|NP_172478.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|79317492|ref|NP_001031015.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|26391680|sp|Q9M439.1|BCAT2_ARATH RecName: Full=Branched-chain-amino-acid aminotransferase 2, chloroplastic; Short=Atbcat-2; Flags: Precursor gi|13877745|gb|AAK43950.1|AF370135_1 putative tat-binding protein [Arabidopsis thaliana] gi|8249004|emb|CAB93128.1| branched-chain amino acid transaminase [Arabidopsis thaliana] gi|15293209|gb|AAK93715.1| putative tat-binding protein [Arabidopsis thaliana] gi|222424474|dbj|BAH20192.1| AT1G10070 [Arabidopsis thaliana] gi|332190416|gb|AEE28537.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|332190417|gb|AEE28538.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|186478317|ref|NP_001031016.2| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|3540183|gb|AAC34333.1| Highly Similar to branched-chain amino acid aminotransferase [Arabidopsis thaliana] gi|227206244|dbj|BAH57177.1| AT1G10070 [Arabidopsis thaliana] gi|332190418|gb|AEE28539.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|302142143|emb|CBI19346.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449450320|ref|XP_004142911.1| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like [Cucumis sativus] gi|449494398|ref|XP_004159536.1| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|407317193|gb|AFU07634.1| mitochodrial branched-chain aminotransferase 1 [Humulus lupulus] Back     alignment and taxonomy information
>gi|288310302|gb|ADC45390.1| branched chain amino acid transaminase [Cucumis melo] Back     alignment and taxonomy information
>gi|297843816|ref|XP_002889789.1| ATBCAT-2 [Arabidopsis lyrata subsp. lyrata] gi|297335631|gb|EFH66048.1| ATBCAT-2 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query339
TAIR|locus:2201921388 BCAT-2 "branched-chain amino a 0.834 0.729 0.759 2.3e-117
TAIR|locus:2097320413 BCAT3 "branched-chain aminotra 0.834 0.685 0.684 4.4e-107
TAIR|locus:2201931384 BCAT-1 "branched-chain amino a 0.831 0.734 0.687 2.1e-100
TAIR|locus:2031030356 AT1G50110 [Arabidopsis thalian 0.831 0.792 0.621 2.8e-98
TAIR|locus:2031040367 BCAT7 "branched-chain amino ac 0.831 0.768 0.625 4.1e-97
TAIR|locus:2091216354 BCAT4 "branched-chain aminotra 0.831 0.796 0.579 4.3e-93
TIGR_CMR|GSU_0656357 GSU_0656 "branched-chain amino 0.831 0.789 0.435 2.1e-61
UNIPROTKB|A0R066368 ilvE "Branched-chain-amino-aci 0.834 0.769 0.4 8.6e-56
UNIPROTKB|Q10399368 ilvE "Branched-chain-amino-aci 0.831 0.766 0.404 1.9e-53
ASPGD|ASPL0000058845394 AN0385 [Emericella nidulans (t 0.814 0.700 0.385 1.6e-45
TAIR|locus:2201921 BCAT-2 "branched-chain amino acid transaminase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1156 (412.0 bits), Expect = 2.3e-117, P = 2.3e-117
 Identities = 215/283 (75%), Positives = 257/283 (90%)

Query:    57 QGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRW 116
             Q ++EG KAYRKE+G+L+LFRPD NAIR++ GAERM MPSPS+DQF++AVKQTALANKRW
Sbjct:   106 QAIYEGTKAYRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQTALANKRW 165

Query:   117 VPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHR 176
             VPP GKG+LYIRPLL+GSGPILGL PAPEYTF+V+ASPVGNYFKEG+A LNLYVE+E+ R
Sbjct:   166 VPPAGKGTLYIRPLLMGSGPILGLGPAPEYTFIVYASPVGNYFKEGMAALNLYVEEEYVR 225

Query:   177 ATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNII 236
             A PGGAGGVK+I+NYAPVLKA+SRAK+RGFSDVLYLDSV KK LEE SSCN+F++KG  I
Sbjct:   226 AAPGGAGGVKSITNYAPVLKALSRAKSRGFSDVLYLDSVKKKYLEEASSCNVFVVKGRTI 285

Query:   237 STPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSI 296
             STPAT+GTIL GITRKS++EIASD G+QV E+A+ VDE+++ADEVFCTGTAVVVAPVG+I
Sbjct:   286 STPATNGTILEGITRKSVMEIASDQGYQVVEKAVHVDEVMDADEVFCTGTAVVVAPVGTI 345

Query:   297 TYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN 339
             TY+ KR+E+KTG +SV ++L S LVGIQTGLI+DNKGW  +IN
Sbjct:   346 TYQEKRVEYKTGDESVCQKLRSVLVGIQTGLIEDNKGWVTDIN 388
GO:0003824 "catalytic activity" evidence=IEA;ISS
GO:0004084 "branched-chain-amino-acid transaminase activity" evidence=IEA;IGI
GO:0005737 "cytoplasm" evidence=ISM
GO:0005739 "mitochondrion" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA
GO:0009081 "branched-chain amino acid metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=IDA
GO:0009407 "toxin catabolic process" evidence=RCA
GO:0009744 "response to sucrose stimulus" evidence=RCA
GO:0009750 "response to fructose stimulus" evidence=RCA
TAIR|locus:2097320 BCAT3 "branched-chain aminotransferase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201931 BCAT-1 "branched-chain amino acid transaminase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031030 AT1G50110 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031040 BCAT7 "branched-chain amino acid transaminase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091216 BCAT4 "branched-chain aminotransferase4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_0656 GSU_0656 "branched-chain amino acid aminotransferase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|A0R066 ilvE "Branched-chain-amino-acid aminotransferase" [Mycobacterium smegmatis str. MC2 155 (taxid:246196)] Back     alignment and assigned GO terms
UNIPROTKB|Q10399 ilvE "Branched-chain-amino-acid aminotransferase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
ASPGD|ASPL0000058845 AN0385 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9ZJF1ILVE_HELPJ2, ., 6, ., 1, ., 4, 20.40200.82590.8235yesno
Q9M439BCAT2_ARATH2, ., 6, ., 1, ., 4, 20.75970.83480.7293yesno
O26004ILVE_HELPY2, ., 6, ., 1, ., 4, 20.40200.82590.8235yesno
P0A1A5ILVE_SALTY2, ., 6, ., 1, ., 4, 20.30250.84950.9320yesno
P54689ILVE_HAEIN2, ., 6, ., 1, ., 4, 20.39260.92030.9096yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.6.10.963
4th Layer2.6.1.420.946

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_Genewise1_v1.C_LG_II1818
hypothetical protein (319 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.V.3049.1
2-isopropylmalate synthase (EC-2.3.3.13) (545 aa)
•    •• 0.975
estExt_fgenesh4_pm.C_LG_III0598
hypothetical protein (605 aa)
•  • •• 0.959
estExt_fgenesh4_pg.C_LG_I0451
hypothetical protein (611 aa)
•  • •• 0.959
gw1.XI.1444.1
aminoacyl-tRNA ligase (EC-6.1.1.4) (889 aa)
     •• 0.930
fgenesh4_pg.C_LG_II002297
aminoacyl-tRNA ligase (EC-6.1.1.9) (951 aa)
     •• 0.915
gw1.X.4012.1
isoleucyl-tRNA synthetase (1029 aa)
     •• 0.907
estExt_fgenesh4_pg.C_LG_VII1280
SubName- Full=Putative uncharacterized protein; (1054 aa)
     •• 0.905
eugene3.00050267
aminoacyl-tRNA ligase (EC-6.1.1.9) (1046 aa)
     •• 0.904
gw1.III.165.1
hypothetical protein (320 aa)
     •  0.901
fgenesh4_pm.C_LG_XIV000150
ketopantoate hydroxymethyltransferase (EC-2.1.2.11) (335 aa)
     •• 0.900

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query339
PLN02782403 PLN02782, PLN02782, Branched-chain amino acid amin 1e-179
PLN02259388 PLN02259, PLN02259, branched-chain-amino-acid amin 1e-161
PLN03117355 PLN03117, PLN03117, Branched-chain-amino-acid amin 1e-156
PLN02883384 PLN02883, PLN02883, Branched-chain amino acid amin 1e-139
PRK13357356 PRK13357, PRK13357, branched-chain amino acid amin 1e-137
cd01557279 cd01557, BCAT_beta_family, BCAT_beta_family: Branc 1e-122
TIGR01123313 TIGR01123, ilvE_II, branched-chain amino acid amin 1e-108
cd00449256 cd00449, PLPDE_IV, PyridoxaL 5'-Phosphate Dependen 2e-82
COG0115284 COG0115, IlvE, Branched-chain amino acid aminotran 2e-70
TIGR01122298 TIGR01122, ilvE_I, branched-chain amino acid amino 2e-38
PRK06606306 PRK06606, PRK06606, branched-chain amino acid amin 5e-38
pfam01063231 pfam01063, Aminotran_4, Aminotransferase class IV 1e-36
cd01558270 cd01558, D-AAT_like, D-Alanine aminotransferase (D 1e-30
cd01559249 cd01559, ADCL_like, ADCL_like: 4-Amino-4-deoxychor 1e-27
PRK13356286 PRK13356, PRK13356, aminotransferase; Provisional 1e-26
PRK07544292 PRK07544, PRK07544, branched-chain amino acid amin 2e-23
PRK08320288 PRK08320, PRK08320, branched-chain amino acid amin 2e-22
PRK07849292 PRK07849, PRK07849, 4-amino-4-deoxychorismate lyas 6e-18
TIGR03461261 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase 4e-15
PRK06092268 PRK06092, PRK06092, 4-amino-4-deoxychorismate lyas 1e-14
PRK06680286 PRK06680, PRK06680, D-amino acid aminotransferase; 2e-13
TIGR01121276 TIGR01121, D_amino_aminoT, D-amino acid aminotrans 2e-13
PRK12479299 PRK12479, PRK12479, branched-chain amino acid amin 8e-13
PRK07650283 PRK07650, PRK07650, 4-amino-4-deoxychorismate lyas 1e-12
PRK12400290 PRK12400, PRK12400, D-amino acid aminotransferase; 4e-07
PLN02845336 PLN02845, PLN02845, Branched-chain-amino-acid amin 0.004
>gnl|CDD|215418 PLN02782, PLN02782, Branched-chain amino acid aminotransferase Back     alignment and domain information 
 Score =  502 bits (1295), Expect = e-179
 Identities = 207/284 (72%), Positives = 249/284 (87%), Gaps = 1/284 (0%)

Query: 57  QGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRW 116
           QGLFEG+KAYRKEDG ++LFRP++NAIR++ GAERMCMP+P+++QF++AVK+T LANKRW
Sbjct: 120 QGLFEGLKAYRKEDGNILLFRPEENAIRMRNGAERMCMPAPTVEQFVEAVKETVLANKRW 179

Query: 117 VPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHR 176
           VPPPGKGSLYIRPLL+GSG +LGLAPAPEYTFL++ SPVGNYFKEG+AP+NL VE+EFHR
Sbjct: 180 VPPPGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGVAPINLIVENEFHR 239

Query: 177 ATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNII 236
           ATPGG GGVK I NYA VLKA S AK +G+SDVLYLD V+KK LEEVSSCNIFI+K N+I
Sbjct: 240 ATPGGTGGVKTIGNYAAVLKAQSIAKAKGYSDVLYLDCVHKKYLEEVSSCNIFIVKDNVI 299

Query: 237 STPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSI 296
           STPA  GTIL GITRKSII++A   GFQVEER + VDELLEADEVFCTGTAVVV+PVGSI
Sbjct: 300 STPAIKGTILPGITRKSIIDVARSQGFQVEERNVTVDELLEADEVFCTGTAVVVSPVGSI 359

Query: 297 TYRGKRIEF-KTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN 339
           TY+GKR+ + + G  +VS++LY+ L  +Q GLI+DN  WTVE++
Sbjct: 360 TYKGKRVSYGEGGFGTVSQQLYTVLTSLQMGLIEDNMNWTVELS 403

Length = 403
>gnl|CDD|177901 PLN02259, PLN02259, branched-chain-amino-acid aminotransferase 2 Back     alignment and domain information
>gnl|CDD|178664 PLN03117, PLN03117, Branched-chain-amino-acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|178471 PLN02883, PLN02883, Branched-chain amino acid aminotransferase Back     alignment and domain information
>gnl|CDD|237363 PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|238798 cd01557, BCAT_beta_family, BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate Back     alignment and domain information
>gnl|CDD|233278 TIGR01123, ilvE_II, branched-chain amino acid aminotransferase, group II Back     alignment and domain information
>gnl|CDD|238254 cd00449, PLPDE_IV, PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV) Back     alignment and domain information
>gnl|CDD|223193 COG0115, IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|130192 TIGR01122, ilvE_I, branched-chain amino acid aminotransferase, group I Back     alignment and domain information
>gnl|CDD|235841 PRK06606, PRK06606, branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>gnl|CDD|216275 pfam01063, Aminotran_4, Aminotransferase class IV Back     alignment and domain information
>gnl|CDD|238799 cd01558, D-AAT_like, D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids Back     alignment and domain information
>gnl|CDD|238800 cd01559, ADCL_like, ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate Back     alignment and domain information
>gnl|CDD|237362 PRK13356, PRK13356, aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|181025 PRK07544, PRK07544, branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>gnl|CDD|236238 PRK08320, PRK08320, branched-chain amino acid aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|236114 PRK07849, PRK07849, 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>gnl|CDD|132501 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase Back     alignment and domain information
>gnl|CDD|235696 PRK06092, PRK06092, 4-amino-4-deoxychorismate lyase; Reviewed Back     alignment and domain information
>gnl|CDD|180656 PRK06680, PRK06680, D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|130191 TIGR01121, D_amino_aminoT, D-amino acid aminotransferase Back     alignment and domain information
>gnl|CDD|183549 PRK12479, PRK12479, branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|181067 PRK07650, PRK07650, 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>gnl|CDD|171470 PRK12400, PRK12400, D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|215454 PLN02845, PLN02845, Branched-chain-amino-acid aminotransferase-like protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 339
PLN02782403 Branched-chain amino acid aminotransferase 100.0
PLN02259388 branched-chain-amino-acid aminotransferase 2 100.0
PLN02883384 Branched-chain amino acid aminotransferase 100.0
PLN03117355 Branched-chain-amino-acid aminotransferase; Provis 100.0
KOG0975379 consensus Branched chain aminotransferase BCAT1, p 100.0
PRK13357356 branched-chain amino acid aminotransferase; Provis 100.0
TIGR01123313 ilvE_II branched-chain amino acid aminotransferase 100.0
PRK06606306 branched-chain amino acid aminotransferase; Valida 100.0
TIGR01122298 ilvE_I branched-chain amino acid aminotransferase, 100.0
cd01557279 BCAT_beta_family BCAT_beta_family: Branched-chain 100.0
PRK12479299 branched-chain amino acid aminotransferase; Provis 100.0
PRK08320288 branched-chain amino acid aminotransferase; Review 100.0
PRK07650283 4-amino-4-deoxychorismate lyase; Provisional 100.0
PRK07544292 branched-chain amino acid aminotransferase; Valida 100.0
PRK13356286 aminotransferase; Provisional 100.0
PRK12400290 D-amino acid aminotransferase; Reviewed 100.0
PRK06680286 D-amino acid aminotransferase; Reviewed 100.0
PLN02845336 Branched-chain-amino-acid aminotransferase-like pr 100.0
COG0115284 IlvE Branched-chain amino acid aminotransferase/4- 100.0
cd01558270 D-AAT_like D-Alanine aminotransferase (D-AAT_like) 100.0
TIGR01121276 D_amino_aminoT D-amino acid aminotransferase. Spec 100.0
PRK07849292 4-amino-4-deoxychorismate lyase; Provisional 100.0
cd00449256 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes 100.0
PRK06092268 4-amino-4-deoxychorismate lyase; Reviewed 100.0
cd01559249 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lya 100.0
TIGR03461261 pabC_Proteo aminodeoxychorismate lyase. Members of 100.0
PRK09266266 hypothetical protein; Provisional 100.0
PF01063231 Aminotran_4: Aminotransferase class IV; InterPro: 100.0
PRK07546209 hypothetical protein; Provisional 100.0
PRK07101187 hypothetical protein; Provisional 100.0
>PLN02782 Branched-chain amino acid aminotransferase Back     alignment and domain information 
Probab=100.00  E-value=2.6e-71  Score=537.36  Aligned_cols=326  Identities=66%  Similarity=1.077  Sum_probs=293.5

Q ss_pred             ccccccccCcccceeeeee--hhcccc------c-ccc--ccccCCcccchhcccceeeeeEEEeccCCeeeecChhhHH
Q 019544           14 KLYMISFSQIGFWQIRFTT--SAKFKL------E-LVI--FFKKKNIANHTISTQGLFEGMKAYRKEDGQLVLFRPDQNA   82 (339)
Q Consensus        14 ~~~~~~~~~~~~~~g~~~~--~~~~~~------~-i~p--~~~~~~~~~~~~yG~gvFEtir~~~~~~G~~~~f~l~~Hl   82 (339)
                      +...+++++++|+.-+++|  ..++..      + ++|  .+.++|.|++|+||||||||||+|++.||++++|++++|+
T Consensus        66 ~~~~~~~~~l~fg~~~td~m~~~~~~~~~~w~ng~ivp~~~~~i~~~d~gl~YGdgvFEg~kayr~~~G~i~lFr~d~H~  145 (403)
T PLN02782         66 ELADIDWDNLGFGLVPTDYMYIMKCNRDGEFSKGELQRFGNIELSPSAGVLNYGQGLFEGLKAYRKEDGNILLFRPEENA  145 (403)
T ss_pred             ccccCCccccCCCccccCceEEEEECCCCcEeCCEEEECCCCEeChhhhHHhhhhhhhheEEEEEcCCCcEeeeChHHHH
Confidence            3345566777777777666  333321      1 566  7778899999999999999999999999999899999999


Q ss_pred             HHHHHhHhcCCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCccEEEEEEEeecCCccccCCCCCeEEEEEEeeCCccccCC
Q 019544           83 IRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEG  162 (339)
Q Consensus        83 ~RL~~Sa~~l~~~~~~~~~l~~~i~~l~~~~~~~~p~~~~~~~~iR~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~g  162 (339)
                      +||.+||++|+|+.|+.++|.+++.++++.|+.|+|+...+.+|||++++|+++.+|+.++.+++++|++.|.++|+..|
T Consensus       146 ~RL~~SA~rL~lp~~~~e~l~~~i~~lv~~n~~~vP~~~~~~lyiRp~v~g~~~~lG~~~~~~~~~~i~~~p~~~~~~~g  225 (403)
T PLN02782        146 IRMRNGAERMCMPAPTVEQFVEAVKETVLANKRWVPPPGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEG  225 (403)
T ss_pred             HHHHHHHHHhCcCCCCHHHHHHHHHHHHHhccccCCCCCCccEEEEEEEEecCCCcCcCCCCCcEEEEEEEECccccccC
Confidence            99999999999998889999999999999999999987667999999999877778887777788999999998888788


Q ss_pred             CcceEEEeeccccccCCCCCCCcccccChHHHHHHHHHHHHCCCCeEEEEccCCCCeEEecCceeEEEEECCEEEccCCC
Q 019544          163 LAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATS  242 (339)
Q Consensus       163 ~~~~~l~~~~~~~r~~p~~~~~~Kt~~ny~~~~~a~~eA~~~g~de~Llld~~~~g~v~E~s~sNif~v~~g~l~TP~l~  242 (339)
                      ++++++.+++++.|..|+.++++|+++||+.+++++++|+++|+||+||+|..++|+|+|++++|||++++++|+||+++
T Consensus       226 ~~~v~l~v~~~~~Ra~p~g~g~~Kt~~nY~~~l~a~~eA~~~G~de~L~Ld~~~~g~V~E~~~sNlF~v~~~~l~TP~l~  305 (403)
T PLN02782        226 VAPINLIVENEFHRATPGGTGGVKTIGNYAAVLKAQSIAKAKGYSDVLYLDCVHKKYLEEVSSCNIFIVKDNVISTPAIK  305 (403)
T ss_pred             CccEEEEEeCceeecCCCCCcccchhhhHHHHHHHHHHHHHcCCCEEEEEeCCCCCEEEEcCcEEEEEEECCEEEcCCCc
Confidence            88888877767889999999999998899999999999999999999999953379999999999999999999999999


Q ss_pred             CCcccChHHHHHHHHHHhCCCcEEEEecChhhHhcccEEEEecCccceEEEEEEEeCCeEEee-CCCchHHHHHHHHHHH
Q 019544          243 GTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEF-KTGAQSVSRELYSTLV  321 (339)
Q Consensus       243 ~~iL~GItR~~vi~~a~~~Gi~v~e~~i~~~eL~~adevfltnt~~~i~pV~~I~~~~~~i~~-~~~~gp~t~~L~~~~~  321 (339)
                      .+||+||||+.||++|+++|++|+|+.|+++||.+|||+|+|||+.+|+||.+|+++|+.+.+ +|++||+|++|++.|.
T Consensus       306 ~~iLpGITR~svlela~~~Gi~V~Er~i~~~eL~~AdEvF~tgTa~~V~PV~~I~~~g~~~~~~~g~~Gpvt~~L~~~l~  385 (403)
T PLN02782        306 GTILPGITRKSIIDVARSQGFQVEERNVTVDELLEADEVFCTGTAVVVSPVGSITYKGKRVSYGEGGFGTVSQQLYTVLT  385 (403)
T ss_pred             CCcCcCHHHHHHHHHHHHcCCeEEEEECCHHHHhhCCEEEEccCcceEEEEEEEEECCEEEeCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999888988743 4678999999999999


Q ss_pred             HhHcCCCCCCCCCeeeCC
Q 019544          322 GIQTGLIKDNKGWTVEIN  339 (339)
Q Consensus       322 ~~~~~~~~d~~~w~~~~~  339 (339)
                      ++|+|+.+|++||+.+|+
T Consensus       386 ~iq~G~~~~~~~W~~~v~  403 (403)
T PLN02782        386 SLQMGLIEDNMNWTVELS  403 (403)
T ss_pred             HHhcCCCCCCCCCeEECC
Confidence            999999999999999986

>PLN02259 branched-chain-amino-acid aminotransferase 2 Back     alignment and domain information
>PLN02883 Branched-chain amino acid aminotransferase Back     alignment and domain information
>PLN03117 Branched-chain-amino-acid aminotransferase; Provisional Back     alignment and domain information
>KOG0975 consensus Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily [Amino acid transport and metabolism] Back     alignment and domain information
>PRK13357 branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>TIGR01123 ilvE_II branched-chain amino acid aminotransferase, group II Back     alignment and domain information
>PRK06606 branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>TIGR01122 ilvE_I branched-chain amino acid aminotransferase, group I Back     alignment and domain information
>cd01557 BCAT_beta_family BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate Back     alignment and domain information
>PRK12479 branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>PRK08320 branched-chain amino acid aminotransferase; Reviewed Back     alignment and domain information
>PRK07650 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>PRK07544 branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>PRK13356 aminotransferase; Provisional Back     alignment and domain information
>PRK12400 D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>PRK06680 D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>PLN02845 Branched-chain-amino-acid aminotransferase-like protein Back     alignment and domain information
>COG0115 IlvE Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>cd01558 D-AAT_like D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids Back     alignment and domain information
>TIGR01121 D_amino_aminoT D-amino acid aminotransferase Back     alignment and domain information
>PRK07849 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>cd00449 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV) Back     alignment and domain information
>PRK06092 4-amino-4-deoxychorismate lyase; Reviewed Back     alignment and domain information
>cd01559 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate Back     alignment and domain information
>TIGR03461 pabC_Proteo aminodeoxychorismate lyase Back     alignment and domain information
>PRK09266 hypothetical protein; Provisional Back     alignment and domain information
>PF01063 Aminotran_4: Aminotransferase class IV; InterPro: IPR001544 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue Back     alignment and domain information
>PRK07546 hypothetical protein; Provisional Back     alignment and domain information
>PRK07101 hypothetical protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query339
4dqn_A345 Crystal Structure Of The Branched-Chain Aminotransf 6e-61
3jz6_A373 Crystal Structure Of Mycobacterium Smegmatis Branch 3e-58
3dtf_A372 Structural Analysis Of Mycobacterial Branched Chain 4e-58
3ht5_A368 Crystal Structure Of Ilve A Branched Chain Amino Ac 2e-57
3uyy_A358 Crystal Structures Of Branched-Chain Aminotransfera 8e-55
2cog_A386 Crystal Structure Of Oxidized Human Cytosolic Branc 2e-39
2abj_A366 Crystal Structure Of Human Branched Chain Amino Aci 6e-39
2hdk_A365 Crystal Structure Of Cys315ala-Cys318ala Mutant Of 8e-39
2hgw_A365 Crystal Structure Of Cys318ala Mutant Of Human Mito 8e-39
2hg8_A365 Crystal Structure Of Cys315ala Mutant Of Human Mito 2e-38
1ekf_A365 Crystallographic Structure Of Human Branched Chain 3e-38
2hhf_B365 X-ray Crystal Structure Of Oxidized Human Mitochond 5e-37
2hhf_A365 X-ray Crystal Structure Of Oxidized Human Mitochond 5e-36
1i1k_A309 Crystal Structure Of Eschelichia Coli Branched-chai 1e-22
1a3g_A308 Branched-chain Amino Acid Aminotransferase From Esc 1e-22
3u0g_A328 Crystal Structure Of Branched-Chain Amino Acid Amin 2e-17
1wrv_A308 Crystal Structure Of T.Th.Hb8 Branched-Chain Amino 1e-16
3csw_A285 Crystal Structure Of A Putative Branched-Chain Amin 4e-09
1daa_A282 Crystallographic Structure Of D-Amino Acid Aminotra 6e-07
3daa_A277 Crystallographic Structure Of D-Amino Acid Aminotra 6e-07
3lqs_A280 Complex Structure Of D-Amino Acid Aminotransferase 6e-07
3sno_A315 Crystal Structure Of A Hypothetical Aminotransferas 8e-07
5daa_A277 E177k Mutant Of D-Amino Acid Aminotransferase Compl 1e-06
1g2w_A282 E177s Mutant Of The Pyridoxal-5'-phosphate Enzyme D 3e-06
3lul_A272 Crystal Structure Of Putative 4-Amino-4-Deoxychoris 3e-06
1a0g_A282 L201a Mutant Of D-Amino Acid Aminotransferase Compl 3e-06
1et0_A269 Crystal Structure Of Aminodeoxychorismate Lyase Fro 1e-04
2y4r_A292 Crystal Structure Of 4-Amino-4-Deoxychorismate Lyas 3e-04
>pdb|4DQN|A Chain A, Crystal Structure Of The Branched-Chain Aminotransferase From Streptococcus Mutans Length = 345 Back     alignment and structure 
Iteration: 1

 Score =  231 bits (588), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 137/338 (40%), Positives = 191/338 (56%), Gaps = 13/338 (3%)
Query: 12  NWKLYMISFSQIGFWQIRFTTSAKF---KL--ELVIFFKKKNIANHTISTQGLFEGMKAY 66
           +WK     + ++ F  I +    K+   KL  +  +   + + A H    Q  FEG+KAY
Sbjct: 10  DWKNLGFEYHKLPFRYISYYKDGKWDDGKLTEDATLHISESSPALHY--GQEAFEGLKAY 67
Query: 67  RKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKG-SL 125
           R +DG + LFRP+ NA RLQ  A+R+ MP    D+FIDA KQ   AN+ +VPP G G +L
Sbjct: 68  RTKDGSVQLFRPNMNAERLQRTADRLLMPQVPTDKFIDAAKQVVRANEEYVPPYGTGATL 127
Query: 126 YIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEGLAPLNLYVEDEFHRATPGGAGGV 185
           Y+RPLL+G G ++G+ PA EY F +FA PVGNYFK GLAP N  ++D++ RA P G G  
Sbjct: 128 YLRPLLIGVGDVIGVHPADEYIFTIFAMPVGNYFKGGLAPTNFLIQDDYDRAAPHGTGAA 187
Query: 186 KAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIF-ILKGNIISTPATSGT 244
           K   NYA  L     A  R FSDV+YLD      +EEV S N F I K N   TP  S +
Sbjct: 188 KVGGNYAASLLPGKVAHERQFSDVIYLDPATHTKIEEVGSANFFGITKDNEFITP-LSPS 246
Query: 245 ILAGITRKSIIEIASD-CGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRI 303
           IL  +T+ S++ +A    G +  E  + VDEL +  E    GTA V++P+G + +     
Sbjct: 247 ILPSVTKYSLLYLAEHRFGMKAIEGDVCVDELDKFVEAGACGTAAVISPIGGVQHGDDFH 306
Query: 304 EF--KTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN 339
            F  +T    V+ +LY  L GIQ G +K  +GW  +++
Sbjct: 307 VFYSETEVGPVTHKLYDELTGIQFGDVKAPEGWIYKVD 344
>pdb|3JZ6|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Branched Chain Aminotransferase In Complex With Pyridoxal-5'-Phosphate At 1.9 Angstrom. Length = 373 Back     alignment and structure
>pdb|3DTF|A Chain A, Structural Analysis Of Mycobacterial Branched Chain Aminotransferase- Implications For Inhibitor Design Length = 372 Back     alignment and structure
>pdb|3HT5|A Chain A, Crystal Structure Of Ilve A Branched Chain Amino Acid Transaminase From Mycobacterium Tuberculosis Length = 368 Back     alignment and structure
>pdb|3UYY|A Chain A, Crystal Structures Of Branched-Chain Aminotransferase From Deinococcus Radiodurans Complexes With Alpha-Ketoisocaproate And L-Glutamate Suggest Its Radio-Resistance For Catalysis Length = 358 Back     alignment and structure
>pdb|2COG|A Chain A, Crystal Structure Of Oxidized Human Cytosolic Branched-Chain Aminotransferase Complexed With 4-Methylvalerate Length = 386 Back     alignment and structure
>pdb|2ABJ|A Chain A, Crystal Structure Of Human Branched Chain Amino Acid Transaminase In A Complex With An Inhibitor, C16h10n2o4f3scl, And Pyridoxal 5' Phosphate. Length = 366 Back     alignment and structure
>pdb|2HDK|A Chain A, Crystal Structure Of Cys315ala-Cys318ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Length = 365 Back     alignment and structure
>pdb|2HGW|A Chain A, Crystal Structure Of Cys318ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Length = 365 Back     alignment and structure
>pdb|2HG8|A Chain A, Crystal Structure Of Cys315ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Complexed With Its Substrate Mimic, N-Methyl Leucine. Length = 365 Back     alignment and structure
>pdb|1EKF|A Chain A, Crystallographic Structure Of Human Branched Chain Amino Acid Aminotransferase (Mitochondrial) Complexed With Pyridoxal-5'- Phosphate At 1.95 Angstroms (Orthorhombic Form) Length = 365 Back     alignment and structure
>pdb|2HHF|B Chain B, X-ray Crystal Structure Of Oxidized Human Mitochondrial Branched Chain Aminotransferase (hbcatm) Length = 365 Back     alignment and structure
>pdb|2HHF|A Chain A, X-ray Crystal Structure Of Oxidized Human Mitochondrial Branched Chain Aminotransferase (hbcatm) Length = 365 Back     alignment and structure
>pdb|1I1K|A Chain A, Crystal Structure Of Eschelichia Coli Branched-chain Amino Acid Aminotransferase. Length = 309 Back     alignment and structure
>pdb|1A3G|A Chain A, Branched-chain Amino Acid Aminotransferase From Escherichia Coli Length = 308 Back     alignment and structure
>pdb|3U0G|A Chain A, Crystal Structure Of Branched-Chain Amino Acid Aminotransferase From Burkholderia Pseudomallei Length = 328 Back     alignment and structure
>pdb|1WRV|A Chain A, Crystal Structure Of T.Th.Hb8 Branched-Chain Amino Acid Aminotransferase Length = 308 Back     alignment and structure
>pdb|3CSW|A Chain A, Crystal Structure Of A Putative Branched-Chain Amino Acid Aminotransferase (Tm0831) From Thermotoga Maritima At 2.15 A Resolution Length = 285 Back     alignment and structure
>pdb|1DAA|A Chain A, Crystallographic Structure Of D-Amino Acid Aminotransferase Complexed With Pyridoxal-5'-Phosphate Length = 282 Back     alignment and structure
>pdb|3DAA|A Chain A, Crystallographic Structure Of D-Amino Acid Aminotransferase Inactivated By Pyridoxyl-D-Alanine Length = 277 Back     alignment and structure
>pdb|3LQS|A Chain A, Complex Structure Of D-Amino Acid Aminotransferase And 4-Amino-4,5- Dihydro-Thiophenecarboxylic Acid (Adta) Length = 280 Back     alignment and structure
>pdb|3SNO|A Chain A, Crystal Structure Of A Hypothetical Aminotransferase (Ncgl2491) From Corynebacterium Glutamicum Atcc 13032 Kitasato At 1.60 A Resolution Length = 315 Back     alignment and structure
>pdb|5DAA|A Chain A, E177k Mutant Of D-Amino Acid Aminotransferase Complexed With Pyridoxamine-5'-Phosphate Length = 277 Back     alignment and structure
>pdb|1G2W|A Chain A, E177s Mutant Of The Pyridoxal-5'-phosphate Enzyme D-amino Acid Aminotransferase Length = 282 Back     alignment and structure
>pdb|3LUL|A Chain A, Crystal Structure Of Putative 4-Amino-4-Deoxychorismate Lyase. (Yp_094631.1) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 At 1.78 A Resolution Length = 272 Back     alignment and structure
>pdb|1A0G|A Chain A, L201a Mutant Of D-Amino Acid Aminotransferase Complexed With Pyridoxamine-5'-Phosphate Length = 282 Back     alignment and structure
>pdb|1ET0|A Chain A, Crystal Structure Of Aminodeoxychorismate Lyase From Escherichia Coli Length = 269 Back     alignment and structure
>pdb|2Y4R|A Chain A, Crystal Structure Of 4-Amino-4-Deoxychorismate Lyase From Pseudomonas Aeruginosa Length = 292 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query339
3dth_A372 Branched-chain amino acid aminotransferase; open t 1e-149
2a1h_A365 Branched chain aminotransferase; fold type IV; HET 1e-140
2coi_A386 Branched chain aminotransferase 1, cytosolic; PLP- 1e-139
3sno_A315 Hypothetical aminotransferase; D-aminoacid aminotr 1e-48
1iye_A309 Branched-chain amino acid aminotransferase; hexame 1e-47
2eiy_A308 ILVE, branched-chain amino acid aminotransferase; 1e-46
3u0g_A328 Putative branched-chain amino acid aminotransfera; 5e-46
3lul_A272 4-amino-4-deoxychorismate lyase; structural genomi 4e-45
1i2k_A269 4-amino-4-deoxychorismate lyase; pyridoxal phospha 3e-44
2xpf_A292 4-amino-4-deoxychorismate lyase; para-aminobenzoic 7e-43
3csw_A285 BCAT, putative branched-chain-amino-acid aminotran 3e-39
3daa_A277 D-amino acid aminotransferase; pyridoxal phosphate 6e-37
2zgi_A246 Putative 4-amino-4-deoxychorismate lyase; TTHA0621 1e-35
3qqm_A221 MLR3007 protein; structural genomics, joint center 5e-28
3ceb_A194 D-aminoacid aminotransferase-like PLP-dependent E; 2e-16
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A* Length = 365 Back     alignment and structure
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A* Length = 386 Back     alignment and structure
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum} Length = 315 Back     alignment and structure
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A* Length = 309 Back     alignment and structure
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A* Length = 308 Back     alignment and structure
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei} Length = 328 Back     alignment and structure
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila} Length = 272 Back     alignment and structure
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A* Length = 269 Back     alignment and structure
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8} Length = 285 Back     alignment and structure
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A* Length = 277 Back     alignment and structure
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus} Length = 246 Back     alignment and structure
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti} Length = 221 Back     alignment and structure
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus} Length = 194 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query339
3dth_A372 Branched-chain amino acid aminotransferase; open t 100.0
3dtg_A372 Branched-chain amino acid aminotransferase; open t 100.0
3uzo_A358 Branched-chain-amino-acid aminotransferase; BCAT, 100.0
4dqn_A345 Putative branched-chain amino acid aminotransfera; 100.0
3u0g_A328 Putative branched-chain amino acid aminotransfera; 100.0
2a1h_A365 Branched chain aminotransferase; fold type IV; HET 100.0
2coi_A386 Branched chain aminotransferase 1, cytosolic; PLP- 100.0
2eiy_A308 ILVE, branched-chain amino acid aminotransferase; 100.0
1iye_A309 Branched-chain amino acid aminotransferase; hexame 100.0
3daa_A277 D-amino acid aminotransferase; pyridoxal phosphate 100.0
1i2k_A269 4-amino-4-deoxychorismate lyase; pyridoxal phospha 100.0
3lul_A272 4-amino-4-deoxychorismate lyase; structural genomi 100.0
2xpf_A292 4-amino-4-deoxychorismate lyase; para-aminobenzoic 100.0
3sno_A315 Hypothetical aminotransferase; D-aminoacid aminotr 100.0
3csw_A285 BCAT, putative branched-chain-amino-acid aminotran 100.0
2zgi_A246 Putative 4-amino-4-deoxychorismate lyase; TTHA0621 100.0
3qqm_A221 MLR3007 protein; structural genomics, joint center 100.0
3ceb_A194 D-aminoacid aminotransferase-like PLP-dependent E; 100.0
>3dtg_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP; 1.90A {Mycobacterium smegmatis} PDB: 3dtf_A* 3jz6_A* 3ht5_A* Back     alignment and structure
>3uzo_A Branched-chain-amino-acid aminotransferase; BCAT, amino-acid biosynthesis, branched-CH acid biosynthesis, pyridoxal phosphate, L-GLUT; HET: PLP GLU; 2.00A {Deinococcus radiodurans} PDB: 3uzb_A* 3uyy_A* Back     alignment and structure
>4dqn_A Putative branched-chain amino acid aminotransfera; aminotransferase, transferase; 1.97A {Streptococcus mutans} Back     alignment and structure
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei} Back     alignment and structure
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A* Back     alignment and structure
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A* Back     alignment and structure
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A* Back     alignment and structure
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A* Back     alignment and structure
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A* Back     alignment and structure
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A* Back     alignment and structure
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila} Back     alignment and structure
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum} Back     alignment and structure
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8} Back     alignment and structure
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus} Back     alignment and structure
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti} Back     alignment and structure
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 339
d2a1ha1363 e.17.1.1 (A:3-365) Branched-chain aminoacid aminot 4e-59
d1iyea_304 e.17.1.1 (A:) Branched-chain aminoacid aminotransf 4e-49
d1daaa_277 e.17.1.1 (A:) D-aminoacid aminotransferase {Bacill 1e-24
d1i2ka_269 e.17.1.1 (A:) Aminodeoxychorismate lyase {Escheric 6e-23
>d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 363 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: Branched-chain aminoacid aminotransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score =  192 bits (488), Expect = 4e-59
 Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 16/296 (5%)

Query: 57  QGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRW 116
             LFEGMKA++ +D Q+ LFRP  N  R+   A R+C+PS    + ++ +++    +K W
Sbjct: 70  LQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDW 129

Query: 117 VPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK-EGLAPLNLYVEDEFH 175
           VP     SLY+RP+L+G+ P LG++        V   PVG YF    + P++L  +  F 
Sbjct: 130 VPDAAGTSLYVRPVLIGNEPSLGVSQPRRALLFVILCPVGAYFPGGSVTPVSLLADPAFI 189

Query: 176 RATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGN- 234
           RA  GG G  K   NY P +     A  RG   VL+L   + +  E  +           
Sbjct: 190 RAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYGPDHQLTEVGTMNIFVYWTHED 249

Query: 235 ---IISTPATSGTILAGITRKSIIEIASDCG-FQVEERAIPVDELLEA------DEVFCT 284
               + TP  +G IL G+ R+S++++A   G F+V ER I + +LL A       EVF +
Sbjct: 250 GVLELVTPPLNGVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGS 309

Query: 285 GTAVVVAPVGSITYRGKRIEFKTGAQ--SVSRELYSTLVGIQTGLIKDNKGWTVEI 338
           GTA  V PV  I Y+ + +   T      +       L  IQ G       W   +
Sbjct: 310 GTACQVCPVHRILYKDRNLHIPTMENGPELILRFQKELKEIQYG--IRAHEWMFPV 363
>d1iyea_ e.17.1.1 (A:) Branched-chain aminoacid aminotransferase {Escherichia coli [TaxId: 562]} Length = 304 Back     information, alignment and structure
>d1daaa_ e.17.1.1 (A:) D-aminoacid aminotransferase {Bacillus sp., strain YM-1 [TaxId: 1409]} Length = 277 Back     information, alignment and structure
>d1i2ka_ e.17.1.1 (A:) Aminodeoxychorismate lyase {Escherichia coli [TaxId: 562]} Length = 269 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query339
d2a1ha1363 Branched-chain aminoacid aminotransferase {Human ( 100.0
d1iyea_304 Branched-chain aminoacid aminotransferase {Escheri 100.0
d1daaa_277 D-aminoacid aminotransferase {Bacillus sp., strain 100.0
d1i2ka_269 Aminodeoxychorismate lyase {Escherichia coli [TaxI 100.0
>d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: Branched-chain aminoacid aminotransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=100.00  E-value=7.5e-65  Score=486.95  Aligned_cols=308  Identities=33%  Similarity=0.582  Sum_probs=267.7

Q ss_pred             ccCcccceeeeeehhccccccccccccCCcccchhcccceeeeeEEEeccCCeeeecChhhHHHHHHHhHhcCCCCCCCH
Q 019544           20 FSQIGFWQIRFTTSAKFKLELVIFFKKKNIANHTISTQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSI   99 (339)
Q Consensus        20 ~~~~~~~~g~~~~~~~~~~~i~p~~~~~~~~~~~~yG~gvFEtir~~~~~~G~~~~f~l~~Hl~RL~~Sa~~l~~~~~~~   99 (339)
                      +..-+|.||+++|.+++++        ||.|++||||||||||||+|++++|++++|+|++|++||.+||++++++.++.
T Consensus        41 ~~~~~W~ng~ivp~~~~~i--------sp~~~~l~YG~gvFEgiR~y~~~~g~i~lFrld~Hl~RL~~Sa~~l~~~~~~~  112 (363)
T d2a1ha1          41 WNDKGWGQPRIQPFQNLTL--------HPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDK  112 (363)
T ss_dssp             EETTEECCCEEEESCCEEE--------CTTBHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCCCCCH
T ss_pred             ecCCeeeCCEEeEccccee--------CcchhhccccceeeeeEEEEECCCCCEEEEccHHHHHHHHHHHHHhCCCCCCh
Confidence            4455667777777777666        78999999999999999999999999999999999999999999999997789


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCccEEEEEEEeecCCccccCCCCCeEEEEEEeeCCccccCC-CcceEEEeeccccccC
Q 019544          100 DQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKEG-LAPLNLYVEDEFHRAT  178 (339)
Q Consensus       100 ~~l~~~i~~l~~~~~~~~p~~~~~~~~iR~~~~g~~~~~~~~~~~~~~~~i~~~p~~~~~~~g-~~~~~l~~~~~~~r~~  178 (339)
                      +++.+++.++++.|..++|....+.+|||+++++.++.+++.++....+++.+.|...++..+ .++..+.+.+.+.|..
T Consensus       113 ~~~~~~i~~~v~~n~~~v~~~~~~~~yiR~~v~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~r~~  192 (363)
T d2a1ha1         113 LELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPRRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAW  192 (363)
T ss_dssp             HHHHHHHHHHHHHTGGGSCCSTTCEEEEEEEEEECCBCCSCSCCSEEEEEEEEEEECCSSSSSSCCCEEEEECTTCCSCC
T ss_pred             HHHHHHHHHHHHHHHhhccccccccEEEEEeeccCCccccccCCcccceeEEEeeccccCccccccceeEEEeeeccccC
Confidence            999999999999999898876666899999998877778887776666666676666555433 4556666666778888


Q ss_pred             CCCCCCcccccChHHHHHHHHHHHHCCCCeEEEEccCCCCeEEecCceeEEEEECC-----EEEccCCCCCcccChHHHH
Q 019544          179 PGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGN-----IISTPATSGTILAGITRKS  253 (339)
Q Consensus       179 p~~~~~~Kt~~ny~~~~~a~~eA~~~g~de~Llld~~~~g~v~E~s~sNif~v~~g-----~l~TP~l~~~iL~GItR~~  253 (339)
                      |......|.++||+++++|.++|+++||||+||||.. +|+|+|++++|+|+++++     +++|||++.+|||||||+.
T Consensus       193 ~~~~~~~k~~~ny~~~~la~~eA~~~G~de~l~L~~~-dg~v~E~~~sNiF~v~~~kdG~~~l~tppl~~~ILpGITR~~  271 (363)
T d2a1ha1         193 VGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYGP-DHQLTEVGTMNIFVYWTHEDGVLELVTPPLNGVILPGVVRQS  271 (363)
T ss_dssp             TTSSTTSCBGGGTTTHHHHHHHHHHTTCSEEEEEETT-TTEEEEETTEEEEEEEECTTSCEEEEECCCSSSSCCCHHHHH
T ss_pred             ccccccccccccccchhhHHHHhhcCCceeeeecccc-cceEEeccceEEEEEEecCCCcEEEEeccccccccCchHHHH
Confidence            8888888888899999999999999999999999753 799999999999999776     6999999999999999999


Q ss_pred             HHHHHHhCC-CcEEEEecChhhHhcc------cEEEEecCccceEEEEEEEeCCeEEe-eCCCchH-HHHHHHHHHHHhH
Q 019544          254 IIEIASDCG-FQVEERAIPVDELLEA------DEVFCTGTAVVVAPVGSITYRGKRIE-FKTGAQS-VSRELYSTLVGIQ  324 (339)
Q Consensus       254 vi~~a~~~G-i~v~e~~i~~~eL~~a------devfltnt~~~i~pV~~I~~~~~~i~-~~~~~gp-~t~~L~~~~~~~~  324 (339)
                      ||++|+++| ++|+|++|+++||.+|      ||||+|||+.+|+||.+|+++++.+. .+|++|| +|++|+++|.++|
T Consensus       272 Viela~~~g~i~V~Er~i~~~eL~~A~~~~~~dEvF~tgTa~~I~PV~~I~~~~~~~~i~~g~~g~~it~~L~~~l~~iq  351 (363)
T d2a1ha1         272 LLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHIPTMENGPELILRFQKELKEIQ  351 (363)
T ss_dssp             HHHHHHHHTSSEEEECCCBHHHHHHHHHTTCEEEEEEEETTTEEEEEEEEEETTEEEECTTGGGTTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCceeecCCCHHHHHhHhhcCCccEEEEcCCCcEEEEEEEEEeCCceEEeCCCCcCHHHHHHHHHHHHHHh
Confidence            999999997 9999999999999999      99999999999999999988766543 2566775 9999999999999


Q ss_pred             cCCCCCCCCCeeeC
Q 019544          325 TGLIKDNKGWTVEI  338 (339)
Q Consensus       325 ~~~~~d~~~w~~~~  338 (339)
                      +|+.+  +||+.+|
T Consensus       352 ~G~~~--~~W~~~v  363 (363)
T d2a1ha1         352 YGIRA--HEWMFPV  363 (363)
T ss_dssp             TTSSC--CTTEEEC
T ss_pred             CCCCC--CCCeeEC
Confidence            99865  5999987
>d1iyea_ e.17.1.1 (A:) Branched-chain aminoacid aminotransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1daaa_ e.17.1.1 (A:) D-aminoacid aminotransferase {Bacillus sp., strain YM-1 [TaxId: 1409]} Back     information, alignment and structure
>d1i2ka_ e.17.1.1 (A:) Aminodeoxychorismate lyase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure