Citrus Sinensis ID: 019602

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------34
MVKFKITIFHICFDSNISSFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEELKV
cccHHHHHHHHHccccEEEccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccccEEEccccccccccccccccccccHHHHHcccccccccHHHHHccccccccHHHHHHHcccccccccccHHHHHHHHHccccccccHHHHHHHHHHHccccccccHHHHcHHHHHHHHcccccHHHHHHHHHcccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccccccccEEEEcccccccccccccccccHHHHHHcccccccccccccc
ccHHEEEEEHHHccEEEEEcccccEEEcccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccEEEEEccEEEccccEEEEcccEEEEEccEEEcccccEEccccccccHHEcccccccccEEEEEEEcccccccHHHHHHHccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccccccccHHHccHHHHHHHHcccccccccccc
MVKFKITIFHICfdsnissfpnnavicgqsplnhlqsTTQNQLSEMIEVFTAEYSLICKIseykkpyislmdgvtmgfgigisghgryriVTEKTllampengiglfpdvgfsyiaakgpgggsvGAYLGMtgkristpsdalfaglgtdyvpsgnlgslKEALLAVTFSEDPHQDIVALLAKyssdpegeaplklllpqitscfssEKSVRQIIEELKKHQSSAETSVAQWADEALqgmgkgapfslcLTQKYFSKVAsahgktdnelsklsgvMKYEYRVALRSSLRSDFAEGVRAVLvdkdqnpkwnpasleevnQSEVEALfeplgtgveelkv
MVKFKITIFHICFDSNISSFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVAsahgktdnelsklsgvMKYEYRVALRSSLRSDFAEGVRAVLvdkdqnpkwnpasleevnqsevealfeplgtgveelkv
MVKFKITIFHICFDSNISSFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEELKV
******************************************LSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKY*********LKLLLPQITSCFS*************************WADEALQGMGKGAPFSLCLTQKYFSKVASAHG****ELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLV*************************************
**KFKITIFHICFDSNISSFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYS*********KLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGT***ELK*
MVKFKITIFHICFDSNISSFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEE***********VAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEELKV
MVKFKITIFHICFDSNISSFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAH*KTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGT*******
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVKFKITIFHICFDSNISSFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEELKV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query338 2.2.26 [Sep-21-2011]
Q9T0K7421 3-hydroxyisobutyryl-CoA h no no 0.860 0.691 0.738 1e-127
Q9LK08418 3-hydroxyisobutyryl-CoA h yes no 0.860 0.696 0.725 1e-124
Q5ZJ60385 3-hydroxyisobutyryl-CoA h yes no 0.775 0.680 0.392 3e-44
Q8QZS1385 3-hydroxyisobutyryl-CoA h yes no 0.775 0.680 0.368 1e-42
Q6NVY1386 3-hydroxyisobutyryl-CoA h yes no 0.769 0.673 0.377 7e-42
Q5XIE6385 3-hydroxyisobutyryl-CoA h yes no 0.775 0.680 0.368 2e-41
Q28FR6385 3-hydroxyisobutyryl-CoA h yes no 0.772 0.677 0.397 1e-40
Q9LKJ1378 3-hydroxyisobutyryl-CoA h no no 0.769 0.687 0.368 2e-40
A2VDC2385 3-hydroxyisobutyryl-CoA h N/A no 0.772 0.677 0.391 8e-40
Q6NMB0378 Probable 3-hydroxyisobuty no no 0.810 0.724 0.331 5e-39
>sp|Q9T0K7|HIBC6_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial OS=Arabidopsis thaliana GN=At4g13360 PE=1 SV=2 Back     alignment and function desciption
 Score =  454 bits (1169), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 215/291 (73%), Positives = 251/291 (86%)

Query: 48  EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF 107
           +VFTAEY+LIC I+ YKKPYISLMDG+TMGFG+G+SGHGRYR++TE+T+LAMPENGIGLF
Sbjct: 131 KVFTAEYTLICAIAAYKKPYISLMDGITMGFGLGLSGHGRYRVITERTVLAMPENGIGLF 190

Query: 108 PDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 167
           PDVGFSYIAA  PGGGSVGAYLG+TGKRIS PSDALF GLGT YVPS  L SLKEA+L+ 
Sbjct: 191 PDVGFSYIAAHSPGGGSVGAYLGLTGKRISAPSDALFVGLGTHYVPSEKLASLKEAILSA 250

Query: 168 TFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAET 227
             SEDP+QDI A L+KYSS+PE EA LK LLP I S FSS KS+++ IEELKK+Q S E+
Sbjct: 251 NLSEDPNQDIQATLSKYSSNPESEAHLKSLLPHIESAFSSNKSIKETIEELKKYQQSTES 310

Query: 228 SVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS 287
           SV +WA+EAL+G+ KGAPFSL LTQKYFS VA A  K +NEL+ L+GVMK EYR+ALRS+
Sbjct: 311 SVVEWANEALKGLEKGAPFSLYLTQKYFSNVACAKSKPENELATLNGVMKTEYRIALRSA 370

Query: 288 LRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEELKV 338
           LR DFAEGVRAVL+DKDQNPKWNP S+EEV+++EVEALF+PL   VEELKV
Sbjct: 371 LRGDFAEGVRAVLIDKDQNPKWNPTSIEEVDENEVEALFKPLSPEVEELKV 421

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 2EC: .EC: -
>sp|Q9LK08|HIBC7_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 4, mitochondrial OS=Arabidopsis thaliana GN=At3g24360 PE=2 SV=1 Back     alignment and function description
>sp|Q5ZJ60|HIBCH_CHICK 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Gallus gallus GN=HIBCH PE=2 SV=1 Back     alignment and function description
>sp|Q8QZS1|HIBCH_MOUSE 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Mus musculus GN=Hibch PE=1 SV=1 Back     alignment and function description
>sp|Q6NVY1|HIBCH_HUMAN 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Homo sapiens GN=HIBCH PE=1 SV=2 Back     alignment and function description
>sp|Q5XIE6|HIBCH_RAT 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Rattus norvegicus GN=Hibch PE=1 SV=2 Back     alignment and function description
>sp|Q28FR6|HIBCH_XENTR 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus tropicalis GN=hibch PE=2 SV=1 Back     alignment and function description
>sp|Q9LKJ1|HIBC1_ARATH 3-hydroxyisobutyryl-CoA hydrolase 1 OS=Arabidopsis thaliana GN=CHY1 PE=1 SV=1 Back     alignment and function description
>sp|A2VDC2|HIBCH_XENLA 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus laevis GN=hibch PE=2 SV=1 Back     alignment and function description
>sp|Q6NMB0|HIBC3_ARATH Probable 3-hydroxyisobutyryl-CoA hydrolase 3 OS=Arabidopsis thaliana GN=At2g30660 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query338
255549046416 3-hydroxybutyryl-CoA dehydratase, putati 0.890 0.723 0.787 1e-140
359484614421 PREDICTED: 3-hydroxyisobutyryl-CoA hydro 0.896 0.719 0.778 1e-136
297738862407 unnamed protein product [Vitis vinifera] 0.896 0.744 0.778 1e-136
359484612425 PREDICTED: 3-hydroxyisobutyryl-CoA hydro 0.860 0.684 0.790 1e-133
356513121373 PREDICTED: 3-hydroxyisobutyryl-CoA hydro 0.896 0.812 0.762 1e-132
449443139424 PREDICTED: 3-hydroxyisobutyryl-CoA hydro 0.834 0.665 0.780 1e-131
224088081380 predicted protein [Populus trichocarpa] 0.849 0.755 0.777 1e-128
357521071388 3-hydroxyisobutyryl-CoA hydrolase-like p 0.884 0.770 0.732 1e-128
145332679414 3-hydroxyisobutyryl-CoA hydrolase-like p 0.896 0.731 0.726 1e-128
356513119408 PREDICTED: 3-hydroxyisobutyryl-CoA hydro 0.860 0.713 0.766 1e-127
>gi|255549046|ref|XP_002515579.1| 3-hydroxybutyryl-CoA dehydratase, putative [Ricinus communis] gi|223545523|gb|EEF47028.1| 3-hydroxybutyryl-CoA dehydratase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  502 bits (1293), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 237/301 (78%), Positives = 273/301 (90%)

Query: 38  TTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLL 97
           T++NQLS MIEVFTAEYSLICKIS+YKKPYIS MDG+TMGFG+G+SGHGRYR+VTE+T+L
Sbjct: 116 TSKNQLSHMIEVFTAEYSLICKISDYKKPYISFMDGITMGFGLGLSGHGRYRVVTERTVL 175

Query: 98  AMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNL 157
           AMPENGIGLFPDVGFSYIAA  PG GSVGAYLG+TGKRISTPSDALF GLGT +VPSGNL
Sbjct: 176 AMPENGIGLFPDVGFSYIAAHSPGEGSVGAYLGLTGKRISTPSDALFVGLGTHFVPSGNL 235

Query: 158 GSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEE 217
           GS+KEAL ++TFS+DP+ DI ALLAKYS++PE EA LKLLLPQI S FS+  SV++I EE
Sbjct: 236 GSVKEALFSMTFSQDPNDDIKALLAKYSNEPESEAELKLLLPQIISTFSASNSVKEITEE 295

Query: 218 LKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMK 277
           LKKHQ SA+T VA+WA +ALQG+GKGAPFSLCLTQKYFSKVASA+GK ++ELS L+GVMK
Sbjct: 296 LKKHQQSADTKVAEWASDALQGLGKGAPFSLCLTQKYFSKVASAYGKPNSELSTLNGVMK 355

Query: 278 YEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEELK 337
            EYR+ALRSSLR+DFAEGVRAVLVDKDQ PKWNP SLE+++Q+EVE+LFEPL   VEELK
Sbjct: 356 TEYRIALRSSLRNDFAEGVRAVLVDKDQKPKWNPPSLEDIDQNEVESLFEPLSPEVEELK 415

Query: 338 V 338
           V
Sbjct: 416 V 416

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359484614|ref|XP_002284721.2| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297738862|emb|CBI28107.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359484612|ref|XP_003633131.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356513121|ref|XP_003525262.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial-like isoform 2 [Glycine max] Back     alignment and taxonomy information
>gi|449443139|ref|XP_004139338.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial-like [Cucumis sativus] gi|449518115|ref|XP_004166089.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224088081|ref|XP_002308317.1| predicted protein [Populus trichocarpa] gi|222854293|gb|EEE91840.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357521071|ref|XP_003630824.1| 3-hydroxyisobutyryl-CoA hydrolase-like protein [Medicago truncatula] gi|355524846|gb|AET05300.1| 3-hydroxyisobutyryl-CoA hydrolase-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|145332679|ref|NP_001078205.1| 3-hydroxyisobutyryl-CoA hydrolase-like protein 4 [Arabidopsis thaliana] gi|332643374|gb|AEE76895.1| 3-hydroxyisobutyryl-CoA hydrolase-like protein 4 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356513119|ref|XP_003525261.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial-like isoform 1 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query338
TAIR|locus:2142050421 AT4G13360 [Arabidopsis thalian 0.860 0.691 0.738 1.7e-114
TAIR|locus:2087218418 AT3G24360 [Arabidopsis thalian 0.860 0.696 0.725 3.3e-111
TAIR|locus:2152069378 CHY1 "beta-hydroxyisobutyryl-C 0.778 0.695 0.362 2.6e-38
TAIR|locus:2054437378 AT2G30660 [Arabidopsis thalian 0.822 0.735 0.336 3e-37
TAIR|locus:2054517378 AT2G30650 [Arabidopsis thalian 0.837 0.748 0.348 2.1e-36
ASPGD|ASPL0000005013505 AN6844 [Emericella nidulans (t 0.804 0.538 0.342 4.4e-36
FB|FBgn0038326386 CG5044 [Drosophila melanogaste 0.553 0.484 0.405 6e-32
UNIPROTKB|Q48KW7365 PSPPH_1721 "Enoly-CoA hydratas 0.840 0.778 0.31 9.8e-32
TAIR|locus:2009180387 AT1G06550 [Arabidopsis thalian 0.804 0.702 0.310 1.3e-31
TIGR_CMR|CBU_1856379 CBU_1856 "enoyl-CoA hydratase/ 0.644 0.575 0.352 4.9e-30
TAIR|locus:2142050 AT4G13360 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1129 (402.5 bits), Expect = 1.7e-114, P = 1.7e-114
 Identities = 215/291 (73%), Positives = 251/291 (86%)

Query:    48 EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF 107
             +VFTAEY+LIC I+ YKKPYISLMDG+TMGFG+G+SGHGRYR++TE+T+LAMPENGIGLF
Sbjct:   131 KVFTAEYTLICAIAAYKKPYISLMDGITMGFGLGLSGHGRYRVITERTVLAMPENGIGLF 190

Query:   108 PDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 167
             PDVGFSYIAA  PGGGSVGAYLG+TGKRIS PSDALF GLGT YVPS  L SLKEA+L+ 
Sbjct:   191 PDVGFSYIAAHSPGGGSVGAYLGLTGKRISAPSDALFVGLGTHYVPSEKLASLKEAILSA 250

Query:   168 TFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAET 227
               SEDP+QDI A L+KYSS+PE EA LK LLP I S FSS KS+++ IEELKK+Q S E+
Sbjct:   251 NLSEDPNQDIQATLSKYSSNPESEAHLKSLLPHIESAFSSNKSIKETIEELKKYQQSTES 310

Query:   228 SVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS 287
             SV +WA+EAL+G+ KGAPFSL LTQKYFS VA A  K +NEL+ L+GVMK EYR+ALRS+
Sbjct:   311 SVVEWANEALKGLEKGAPFSLYLTQKYFSNVACAKSKPENELATLNGVMKTEYRIALRSA 370

Query:   288 LRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEELKV 338
             LR DFAEGVRAVL+DKDQNPKWNP S+EEV+++EVEALF+PL   VEELKV
Sbjct:   371 LRGDFAEGVRAVLIDKDQNPKWNPTSIEEVDENEVEALFKPLSPEVEELKV 421
GO:0003824 "catalytic activity" evidence=IEA;ISS
GO:0005739 "mitochondrion" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA;ISS
GO:0005829 "cytosol" evidence=IDA
TAIR|locus:2087218 AT3G24360 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152069 CHY1 "beta-hydroxyisobutyryl-CoA hydrolase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2054437 AT2G30660 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2054517 AT2G30650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000005013 AN6844 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
FB|FBgn0038326 CG5044 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|Q48KW7 PSPPH_1721 "Enoly-CoA hydratase/isomerase family protein" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)] Back     alignment and assigned GO terms
TAIR|locus:2009180 AT1G06550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_1856 CBU_1856 "enoyl-CoA hydratase/isomerase family protein" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LK08HIBC7_ARATH3, ., 1, ., 2, ., -0.72500.86090.6961yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00016784001
SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (381 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00027718001
SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (296 aa)
     •• 0.912
GSVIVG00024504001
SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (403 aa)
•    •• 0.912
GSVIVG00033910001
SubName- Full=Chromosome undetermined scaffold_71, whole genome shotgun sequence; (382 aa)
  •  • •0.908
GSVIVG00036706001
SubName- Full=Chromosome chr15 scaffold_82, whole genome shotgun sequence; (170 aa)
  •  • •0.908
GSVIVG00033921001
SubName- Full=Chromosome undetermined scaffold_71, whole genome shotgun sequence; (409 aa)
  •  • •0.908
GSVIVG00032778001
SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (374 aa)
  •  • •0.907
GSVIVG00018875001
SubName- Full=Chromosome chr12 scaffold_18, whole genome shotgun sequence; (389 aa)
  •  • •0.907
GSVIVG00019151001
SubName- Full=Chromosome chr15 scaffold_19, whole genome shotgun sequence; (405 aa)
  •  • •0.906
GSVIVG00000300001
SubName- Full=Chromosome chr9 scaffold_104, whole genome shotgun sequence; (383 aa)
  •  • •0.906
GSVIVG00038876001
SubName- Full=Chromosome chr8 scaffold_99, whole genome shotgun sequence; (448 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query338
PRK05617342 PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrol 5e-93
PLN02874379 PLN02874, PLN02874, 3-hydroxyisobutyryl-CoA hydrol 1e-51
PLN02988381 PLN02988, PLN02988, 3-hydroxyisobutyryl-CoA hydrol 2e-46
PLN02851407 PLN02851, PLN02851, 3-hydroxyisobutyryl-CoA hydrol 1e-40
PLN02157401 PLN02157, PLN02157, 3-hydroxyisobutyryl-CoA hydrol 2e-37
pfam13766117 pfam13766, ECH_C, 2-enoyl-CoA Hydratase C-terminal 4e-36
cd06558195 cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme 1e-18
COG1024257 COG1024, CaiD, Enoyl-CoA hydratase/carnithine race 2e-13
PRK06072248 PRK06072, PRK06072, enoyl-CoA hydratase; Provision 7e-07
PRK06688259 PRK06688, PRK06688, enoyl-CoA hydratase; Provision 4e-04
TIGR02441 737 TIGR02441, fa_ox_alpha_mit, fatty acid oxidation c 0.001
pfam00378245 pfam00378, ECH, Enoyl-CoA hydratase/isomerase fami 0.003
>gnl|CDD|235533 PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrolase; Provisional Back     alignment and domain information 
 Score =  280 bits (719), Expect = 5e-93
 Identities = 114/279 (40%), Positives = 161/279 (57%), Gaps = 22/279 (7%)

Query: 50  FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPD 109
           F  EY L   I+ Y KPYI+LMDG+ MG G+GIS HG +RIVTE+T +AMPE GIG FPD
Sbjct: 86  FREEYRLNALIARYPKPYIALMDGIVMGGGVGISAHGSHRIVTERTKMAMPETGIGFFPD 145

Query: 110 VGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTF 169
           VG +Y  ++ PG   +G YL +TG RIS  +DAL+AGL   +VPS +L +L +AL+++ +
Sbjct: 146 VGGTYFLSRAPGA--LGTYLALTGARIS-AADALYAGLADHFVPSADLPALLDALISLRW 202

Query: 170 SEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSV 229
                  + A LA +++       L      I  CF+ + +V  II  L+          
Sbjct: 203 DSGA-DVVDAALAAFATPAPAS-ELAAQRAWIDECFAGD-TVEDIIAALEADGG------ 253

Query: 230 AQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLR 289
            ++A +    +   +P SL +T     ++  A G T      L   ++ E R+AL     
Sbjct: 254 -EFAAKTADTLRSRSPTSLKVT---LEQLRRARGLT------LEECLRRELRLALAMLRS 303

Query: 290 SDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEP 328
            DF EGVRAVL+DKD+NPKW+PA+LE+V   +VEA F P
Sbjct: 304 PDFVEGVRAVLIDKDRNPKWSPATLEDVTPEDVEAFFAP 342

Length = 342
>gnl|CDD|178462 PLN02874, PLN02874, 3-hydroxyisobutyryl-CoA hydrolase-like protein Back     alignment and domain information
>gnl|CDD|178568 PLN02988, PLN02988, 3-hydroxyisobutyryl-CoA hydrolase Back     alignment and domain information
>gnl|CDD|178443 PLN02851, PLN02851, 3-hydroxyisobutyryl-CoA hydrolase-like protein Back     alignment and domain information
>gnl|CDD|177817 PLN02157, PLN02157, 3-hydroxyisobutyryl-CoA hydrolase-like protein Back     alignment and domain information
>gnl|CDD|205939 pfam13766, ECH_C, 2-enoyl-CoA Hydratase C-terminal region Back     alignment and domain information
>gnl|CDD|119339 cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily Back     alignment and domain information
>gnl|CDD|223955 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|168377 PRK06072, PRK06072, enoyl-CoA hydratase; Provisional Back     alignment and domain information
>gnl|CDD|235852 PRK06688, PRK06688, enoyl-CoA hydratase; Provisional Back     alignment and domain information
>gnl|CDD|131494 TIGR02441, fa_ox_alpha_mit, fatty acid oxidation complex, alpha subunit, mitochondrial Back     alignment and domain information
>gnl|CDD|201191 pfam00378, ECH, Enoyl-CoA hydratase/isomerase family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 338
PLN02851407 3-hydroxyisobutyryl-CoA hydrolase-like protein 100.0
PLN02988381 3-hydroxyisobutyryl-CoA hydrolase 100.0
KOG1684401 consensus Enoyl-CoA hydratase [Lipid transport and 100.0
PLN02157401 3-hydroxyisobutyryl-CoA hydrolase-like protein 100.0
PRK05617342 3-hydroxyisobutyryl-CoA hydrolase; Provisional 100.0
PLN02874379 3-hydroxyisobutyryl-CoA hydrolase-like protein 100.0
PLN02600251 enoyl-CoA hydratase 100.0
PRK09076258 enoyl-CoA hydratase; Provisional 100.0
PRK05980260 enoyl-CoA hydratase; Provisional 100.0
PRK08150255 enoyl-CoA hydratase; Provisional 100.0
PRK05862257 enoyl-CoA hydratase; Provisional 100.0
PRK07657260 enoyl-CoA hydratase; Provisional 100.0
PRK06142272 enoyl-CoA hydratase; Provisional 100.0
PRK05809260 3-hydroxybutyryl-CoA dehydratase; Validated 100.0
PRK07658257 enoyl-CoA hydratase; Provisional 100.0
PRK08258277 enoyl-CoA hydratase; Provisional 100.0
TIGR02280256 PaaB1 phenylacetate degradation probable enoyl-CoA 100.0
PRK06127269 enoyl-CoA hydratase; Provisional 100.0
PRK09245266 enoyl-CoA hydratase; Provisional 100.0
PRK07799263 enoyl-CoA hydratase; Provisional 100.0
PLN02664275 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA 100.0
PRK09674255 enoyl-CoA hydratase-isomerase; Provisional 100.0
PRK08140262 enoyl-CoA hydratase; Provisional 100.0
PRK08139266 enoyl-CoA hydratase; Validated 100.0
PRK08138261 enoyl-CoA hydratase; Provisional 100.0
PRK06563255 enoyl-CoA hydratase; Provisional 100.0
PRK07659260 enoyl-CoA hydratase; Provisional 100.0
KOG1680290 consensus Enoyl-CoA hydratase [Lipid transport and 100.0
PRK06494259 enoyl-CoA hydratase; Provisional 100.0
PRK05981266 enoyl-CoA hydratase; Provisional 100.0
PRK03580261 carnitinyl-CoA dehydratase; Provisional 100.0
PRK07468262 enoyl-CoA hydratase; Provisional 100.0
PRK05995262 enoyl-CoA hydratase; Provisional 100.0
PRK08252254 enoyl-CoA hydratase; Provisional 100.0
PRK07511260 enoyl-CoA hydratase; Provisional 100.0
PRK06143256 enoyl-CoA hydratase; Provisional 100.0
PRK05864276 enoyl-CoA hydratase; Provisional 100.0
PRK06688259 enoyl-CoA hydratase; Provisional 100.0
PRK05674265 gamma-carboxygeranoyl-CoA hydratase; Validated 100.0
TIGR01929259 menB naphthoate synthase (dihydroxynaphthoic acid 100.0
PRK07327268 enoyl-CoA hydratase; Provisional 100.0
PRK09120275 p-hydroxycinnamoyl CoA hydratase/lyase; Validated 100.0
TIGR03210256 badI 2-ketocyclohexanecarboxyl-CoA hydrolase. Memb 100.0
PRK06210272 enoyl-CoA hydratase; Provisional 100.0
PRK06495257 enoyl-CoA hydratase; Provisional 100.0
PRK11423261 methylmalonyl-CoA decarboxylase; Provisional 100.0
PRK07260255 enoyl-CoA hydratase; Provisional 100.0
PRK06144262 enoyl-CoA hydratase; Provisional 100.0
PRK08260296 enoyl-CoA hydratase; Provisional 100.0
PRK07396273 dihydroxynaphthoic acid synthetase; Validated 100.0
PRK07509262 enoyl-CoA hydratase; Provisional 100.0
TIGR03189251 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hy 100.0
PRK07938249 enoyl-CoA hydratase; Provisional 100.0
PRK06072248 enoyl-CoA hydratase; Provisional 100.0
COG1024257 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipi 100.0
PF00378245 ECH: Enoyl-CoA hydratase/isomerase family; InterPr 100.0
PLN02888265 enoyl-CoA hydratase 100.0
PRK05870249 enoyl-CoA hydratase; Provisional 100.0
PLN02921327 naphthoate synthase 100.0
PRK07827260 enoyl-CoA hydratase; Provisional 100.0
PRK07854243 enoyl-CoA hydratase; Provisional 100.0
PRK06023251 enoyl-CoA hydratase; Provisional 100.0
PLN03214278 probable enoyl-CoA hydratase/isomerase; Provisiona 100.0
PRK07112255 polyketide biosynthesis enoyl-CoA hydratase; Valid 100.0
PRK08259254 enoyl-CoA hydratase; Provisional 100.0
PRK08321302 naphthoate synthase; Validated 100.0
PRK12478298 enoyl-CoA hydratase; Provisional 100.0
PRK08184550 benzoyl-CoA-dihydrodiol lyase; Provisional 100.0
KOG1679291 consensus Enoyl-CoA hydratase [Lipid transport and 100.0
PRK07110249 polyketide biosynthesis enoyl-CoA hydratase; Valid 100.0
TIGR03222546 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the p 100.0
PRK06190258 enoyl-CoA hydratase; Provisional 100.0
PRK08788287 enoyl-CoA hydratase; Validated 100.0
PRK05869222 enoyl-CoA hydratase; Validated 100.0
PRK11730 715 fadB multifunctional fatty acid oxidation complex 100.0
PRK06213229 enoyl-CoA hydratase; Provisional 100.0
PRK11154 708 fadJ multifunctional fatty acid oxidation complex 100.0
KOG1681292 consensus Enoyl-CoA isomerase [Lipid transport and 100.0
TIGR03200360 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hy 100.0
TIGR02440 699 FadJ fatty oxidation complex, alpha subunit FadJ. 100.0
PRK08290288 enoyl-CoA hydratase; Provisional 100.0
COG0447282 MenB Dihydroxynaphthoic acid synthase [Coenzyme me 99.98
TIGR02437 714 FadB fatty oxidation complex, alpha subunit FadB. 99.97
PRK08272302 enoyl-CoA hydratase; Provisional 99.97
KOG0016266 consensus Enoyl-CoA hydratase/isomerase [Lipid tra 99.97
PLN02267239 enoyl-CoA hydratase/isomerase family protein 99.97
TIGR02441 737 fa_ox_alpha_mit fatty acid oxidation complex, alph 99.97
KOG1682287 consensus Enoyl-CoA isomerase [Lipid transport and 99.97
cd06558195 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hy 99.95
TIGR03222 546 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the p 99.95
PRK08184 550 benzoyl-CoA-dihydrodiol lyase; Provisional 99.94
PF13766118 ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PD 99.89
cd07020187 Clp_protease_NfeD_1 Nodulation formation efficienc 99.69
cd07014177 S49_SppA Signal peptide peptidase A. Signal peptid 99.61
cd07016160 S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP- 99.38
cd07019211 S49_SppA_1 Signal peptide peptidase A (SppA), a se 99.17
cd00394161 Clp_protease_like Caseinolytic protease (ClpP) is 99.1
TIGR00705584 SppA_67K signal peptide peptidase SppA, 67K type. 99.03
cd07021178 Clp_protease_NfeD_like Nodulation formation effici 98.89
cd07022214 S49_Sppa_36K_type Signal peptide peptidase A (SppA 98.86
cd07023208 S49_Sppa_N_C Signal peptide peptidase A (SppA), a 98.76
TIGR00706207 SppA_dom signal peptide peptidase SppA, 36K type. 98.76
PRK12319256 acetyl-CoA carboxylase subunit alpha; Provisional 98.26
cd07015172 Clp_protease_NfeD Nodulation formation efficiency 98.2
CHL00198322 accA acetyl-CoA carboxylase carboxyltransferase al 98.18
cd07013162 S14_ClpP Caseinolytic protease (ClpP) is an ATP-de 98.16
cd07018222 S49_SppA_67K_type Signal peptide peptidase A (SppA 98.14
PLN03230431 acetyl-coenzyme A carboxylase carboxyl transferase 98.14
PRK00277200 clpP ATP-dependent Clp protease proteolytic subuni 98.11
TIGR00513316 accA acetyl-CoA carboxylase, carboxyl transferase, 98.1
KOG1683380 consensus Hydroxyacyl-CoA dehydrogenase/enoyl-CoA 98.06
PRK05724319 acetyl-CoA carboxylase carboxyltransferase subunit 98.04
PLN03229 762 acetyl-coenzyme A carboxylase carboxyl transferase 98.0
PRK12553207 ATP-dependent Clp protease proteolytic subunit; Re 97.96
PF00574182 CLP_protease: Clp protease; InterPro: IPR001907 In 97.95
PRK14512197 ATP-dependent Clp protease proteolytic subunit; Pr 97.88
cd07017171 S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP- 97.71
CHL00028200 clpP ATP-dependent Clp protease proteolytic subuni 97.71
TIGR03133274 malonate_beta malonate decarboxylase, beta subunit 97.63
TIGR00493191 clpP ATP-dependent Clp protease, proteolytic subun 97.6
PRK14513201 ATP-dependent Clp protease proteolytic subunit; Pr 97.57
PRK12551196 ATP-dependent Clp protease proteolytic subunit; Re 97.48
PRK14514221 ATP-dependent Clp protease proteolytic subunit; Pr 97.31
PRK07189301 malonate decarboxylase subunit beta; Reviewed 97.17
TIGR03134238 malonate_gamma malonate decarboxylase, gamma subun 97.11
PRK11778330 putative inner membrane peptidase; Provisional 97.0
PRK10949618 protease 4; Provisional 96.99
TIGR00515285 accD acetyl-CoA carboxylase, carboxyl transferase, 96.98
PRK05654292 acetyl-CoA carboxylase subunit beta; Validated 96.89
PF01343154 Peptidase_S49: Peptidase family S49 peptidase clas 96.84
COG0825317 AccA Acetyl-CoA carboxylase alpha subunit [Lipid m 96.78
CHL00174296 accD acetyl-CoA carboxylase beta subunit; Reviewed 96.74
PRK12552222 ATP-dependent Clp protease-like protein; Reviewed 96.46
COG0740200 ClpP Protease subunit of ATP-dependent Clp proteas 96.33
COG0616317 SppA Periplasmic serine proteases (ClpP class) [Po 96.13
TIGR01117512 mmdA methylmalonyl-CoA decarboxylase alpha subunit 95.97
PF01972285 SDH_sah: Serine dehydrogenase proteinase; InterPro 95.81
PF01039 493 Carboxyl_trans: Carboxyl transferase domain; Inter 95.61
TIGR01117512 mmdA methylmalonyl-CoA decarboxylase alpha subunit 94.74
PLN02820 569 3-methylcrotonyl-CoA carboxylase, beta chain 94.44
COG1030436 NfeD Membrane-bound serine protease (ClpP class) [ 94.08
PLN02157401 3-hydroxyisobutyryl-CoA hydrolase-like protein 92.51
PLN02820569 3-methylcrotonyl-CoA carboxylase, beta chain 92.42
COG0777294 AccD Acetyl-CoA carboxylase beta subunit [Lipid me 91.89
TIGR00705 584 SppA_67K signal peptide peptidase SppA, 67K type. 90.76
COG4799526 Acetyl-CoA carboxylase, carboxyltransferase compon 90.35
PF01039493 Carboxyl_trans: Carboxyl transferase domain; Inter 84.33
PRK10949 618 protease 4; Provisional 82.68
>PLN02851 3-hydroxyisobutyryl-CoA hydrolase-like protein Back     alignment and domain information 
Probab=100.00  E-value=2.1e-55  Score=429.18  Aligned_cols=294  Identities=33%  Similarity=0.567  Sum_probs=255.1

Q ss_pred             CCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEeC
Q 019602           20 FPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAM   99 (338)
Q Consensus        20 ~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~~   99 (338)
                      ..|++||+|+|++.+.......+.+....+++..+++...|.++|||+||+|||+|+|||++|+++||+|||+++++|++
T Consensus        94 G~GkaFcAGgDl~~l~~~~~~~~~~~~~~~f~~~~~l~~~i~~~pKPvIA~v~G~amGGG~gLal~~D~rVate~a~fam  173 (407)
T PLN02851         94 GSGRAFCSGADVVSLYHLINEGNVEECKLFFENLYKFVYLQGTYLKPNVAIMDGITMGCGAGISIPGMFRVVTDKTVFAH  173 (407)
T ss_pred             CCCCCccCCcCHHHHHhhccccchHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCEEeeHHHHHHHhCCEEEEeCCceEec
Confidence            35689999999999864322222234556778888899999999999999999999999999999999999999999999


Q ss_pred             CCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHHH
Q 019602          100 PENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA  179 (338)
Q Consensus       100 pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~  179 (338)
                      ||+++|++|++|++++|+|++|.  .+++|++||++++ |+||+++||++++||++++......+.+..  ..+...+..
T Consensus       174 PE~~iGl~PdvG~s~~L~rl~g~--~g~~L~LTG~~i~-a~eA~~~GLa~~~v~~~~l~~l~~~l~~~~--~~~~~~~~~  248 (407)
T PLN02851        174 PEVQMGFHPDAGASYYLSRLPGY--LGEYLALTGQKLN-GVEMIACGLATHYCLNARLPLIEERLGKLL--TDDPAVIED  248 (407)
T ss_pred             chhccCCCCCccHHHHHHHhcCH--HHHHHHHhCCcCC-HHHHHHCCCceeecCHhhHHHHHHHHHhhc--cCCHHHHHH
Confidence            99999999999999999999993  7999999999999 999999999999999999966665555432  235566899


Q ss_pred             HHHhhcCCC-CCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHH
Q 019602          180 LLAKYSSDP-EGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV  258 (338)
Q Consensus       180 ~l~~~~~~~-~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~  258 (338)
                      ++++|.... ...+.+...++.|++||+.+ +++||++.|+.+... ++  .+||+++++.|.++||+|+++|+++++++
T Consensus       249 ~l~~~~~~~~~~~~~~~~~~~~I~~~F~~~-sv~~I~~~L~~~~~~-~~--~~wa~~~~~~l~~~SP~Sl~vt~~~~~~~  324 (407)
T PLN02851        249 SLAQYGDLVYPDKSSVLHKIETIDKCFGHD-TVEEIIEALENEAAS-SY--DEWCKKALKKIKEASPLSLKVTLQSIREG  324 (407)
T ss_pred             HHHHhccccCCCcccHHHHHHHHHHHhCCC-CHHHHHHHHHhcccc-cc--hHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence            999997542 23355666789999999976 999999999974211 11  48999999999999999999999999998


Q ss_pred             hhhcCCCccccCCHHHHHHHHHHHHhhhC---CCCCHHHHHHhhhcCCCCCCCCCCCCcCCCCHHHHHhhhcCCCC
Q 019602          259 ASAHGKTDNELSKLSGVMKYEYRVALRSS---LRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGT  331 (338)
Q Consensus       259 ~~~~~~~~~~~~~l~~~l~~e~~~~~~~~---~~~d~~eg~~afl~eK~r~p~w~~~~~~~v~~~~v~~~~~~~~~  331 (338)
                      .         ..++++++++|+++..+++   .++||.|||||.|+||++.|+|++++++||+++.|+.+|+|++.
T Consensus       325 ~---------~~sl~e~l~~E~~l~~~~~~~~~~~DF~EGVRA~LIDKd~~P~W~p~sl~~V~~~~v~~~f~~~~~  391 (407)
T PLN02851        325 R---------FQTLDQCLAREYRISLCGVSKWVSGDFCEGVRARLVDKDFAPKWDPPSLGEVSKDMVDCYFTPLDE  391 (407)
T ss_pred             h---------cCCHHHHHHHHHHHHHHHHhcCccchHHHHHHHHhcCCCCCCCCCCCChhhCCHHHHHHHhCCCCC
Confidence            8         7799999999999999987   48999999999999999999999999999999999999999853

>PLN02988 3-hydroxyisobutyryl-CoA hydrolase Back     alignment and domain information
>KOG1684 consensus Enoyl-CoA hydratase [Lipid transport and metabolism] Back     alignment and domain information
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein Back     alignment and domain information
>PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional Back     alignment and domain information
>PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein Back     alignment and domain information
>PLN02600 enoyl-CoA hydratase Back     alignment and domain information
>PRK09076 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK05980 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK08150 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK05862 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK07657 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK06142 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated Back     alignment and domain information
>PRK07658 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK08258 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB Back     alignment and domain information
>PRK06127 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK09245 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK07799 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase Back     alignment and domain information
>PRK09674 enoyl-CoA hydratase-isomerase; Provisional Back     alignment and domain information
>PRK08140 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK08139 enoyl-CoA hydratase; Validated Back     alignment and domain information
>PRK08138 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK06563 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK07659 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>KOG1680 consensus Enoyl-CoA hydratase [Lipid transport and metabolism] Back     alignment and domain information
>PRK06494 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK05981 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK03580 carnitinyl-CoA dehydratase; Provisional Back     alignment and domain information
>PRK07468 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK05995 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK08252 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK07511 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK06143 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK05864 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK06688 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK05674 gamma-carboxygeranoyl-CoA hydratase; Validated Back     alignment and domain information
>TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase) Back     alignment and domain information
>PRK07327 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK09120 p-hydroxycinnamoyl CoA hydratase/lyase; Validated Back     alignment and domain information
>TIGR03210 badI 2-ketocyclohexanecarboxyl-CoA hydrolase Back     alignment and domain information
>PRK06210 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK06495 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK11423 methylmalonyl-CoA decarboxylase; Provisional Back     alignment and domain information
>PRK07260 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK06144 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK08260 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK07396 dihydroxynaphthoic acid synthetase; Validated Back     alignment and domain information
>PRK07509 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>TIGR03189 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hydratase Back     alignment and domain information
>PRK07938 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK06072 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] Back     alignment and domain information
>PF00378 ECH: Enoyl-CoA hydratase/isomerase family; InterPro: IPR001753 The crotonase superfamily is comprised of mechanistically diverse proteins that share a conserved trimeric quaternary structure (sometimes a hexamer consisting of a dimer of trimers), the core of which consists of 4 turns of a (beta/beta/alpha)n superhelix Back     alignment and domain information
>PLN02888 enoyl-CoA hydratase Back     alignment and domain information
>PRK05870 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PLN02921 naphthoate synthase Back     alignment and domain information
>PRK07827 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK07854 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK06023 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PLN03214 probable enoyl-CoA hydratase/isomerase; Provisional Back     alignment and domain information
>PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated Back     alignment and domain information
>PRK08259 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK08321 naphthoate synthase; Validated Back     alignment and domain information
>PRK12478 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional Back     alignment and domain information
>KOG1679 consensus Enoyl-CoA hydratase [Lipid transport and metabolism] Back     alignment and domain information
>PRK07110 polyketide biosynthesis enoyl-CoA hydratase; Validated Back     alignment and domain information
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase Back     alignment and domain information
>PRK06190 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK08788 enoyl-CoA hydratase; Validated Back     alignment and domain information
>PRK05869 enoyl-CoA hydratase; Validated Back     alignment and domain information
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed Back     alignment and domain information
>PRK06213 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed Back     alignment and domain information
>KOG1681 consensus Enoyl-CoA isomerase [Lipid transport and metabolism] Back     alignment and domain information
>TIGR03200 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase Back     alignment and domain information
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ Back     alignment and domain information
>PRK08290 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>COG0447 MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism] Back     alignment and domain information
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB Back     alignment and domain information
>PRK08272 enoyl-CoA hydratase; Provisional Back     alignment and domain information
>KOG0016 consensus Enoyl-CoA hydratase/isomerase [Lipid transport and metabolism] Back     alignment and domain information
>PLN02267 enoyl-CoA hydratase/isomerase family protein Back     alignment and domain information
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial Back     alignment and domain information
>KOG1682 consensus Enoyl-CoA isomerase [Lipid transport and metabolism] Back     alignment and domain information
>cd06558 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily Back     alignment and domain information
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase Back     alignment and domain information
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional Back     alignment and domain information
>PF13766 ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PDB: 3JU1_A 3BPT_A Back     alignment and domain information
>cd07020 Clp_protease_NfeD_1 Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease Back     alignment and domain information
>cd07014 S49_SppA Signal peptide peptidase A Back     alignment and domain information
>cd07016 S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease Back     alignment and domain information
>cd07019 S49_SppA_1 Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad Back     alignment and domain information
>cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease Back     alignment and domain information
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type Back     alignment and domain information
>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease Back     alignment and domain information
>cd07022 S49_Sppa_36K_type Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad Back     alignment and domain information
>cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad Back     alignment and domain information
>TIGR00706 SppA_dom signal peptide peptidase SppA, 36K type Back     alignment and domain information
>PRK12319 acetyl-CoA carboxylase subunit alpha; Provisional Back     alignment and domain information
>cd07015 Clp_protease_NfeD Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease Back     alignment and domain information
>CHL00198 accA acetyl-CoA carboxylase carboxyltransferase alpha subunit; Provisional Back     alignment and domain information
>cd07013 S14_ClpP Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease Back     alignment and domain information
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad Back     alignment and domain information
>PLN03230 acetyl-coenzyme A carboxylase carboxyl transferase; Provisional Back     alignment and domain information
>PRK00277 clpP ATP-dependent Clp protease proteolytic subunit; Reviewed Back     alignment and domain information
>TIGR00513 accA acetyl-CoA carboxylase, carboxyl transferase, alpha subunit Back     alignment and domain information
>KOG1683 consensus Hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase [Lipid transport and metabolism] Back     alignment and domain information
>PRK05724 acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated Back     alignment and domain information
>PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional Back     alignment and domain information
>PRK12553 ATP-dependent Clp protease proteolytic subunit; Reviewed Back     alignment and domain information
>PF00574 CLP_protease: Clp protease; InterPro: IPR001907 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK14512 ATP-dependent Clp protease proteolytic subunit; Provisional Back     alignment and domain information
>cd07017 S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease Back     alignment and domain information
>CHL00028 clpP ATP-dependent Clp protease proteolytic subunit Back     alignment and domain information
>TIGR03133 malonate_beta malonate decarboxylase, beta subunit Back     alignment and domain information
>TIGR00493 clpP ATP-dependent Clp protease, proteolytic subunit ClpP Back     alignment and domain information
>PRK14513 ATP-dependent Clp protease proteolytic subunit; Provisional Back     alignment and domain information
>PRK12551 ATP-dependent Clp protease proteolytic subunit; Reviewed Back     alignment and domain information
>PRK14514 ATP-dependent Clp protease proteolytic subunit; Provisional Back     alignment and domain information
>PRK07189 malonate decarboxylase subunit beta; Reviewed Back     alignment and domain information
>TIGR03134 malonate_gamma malonate decarboxylase, gamma subunit Back     alignment and domain information
>PRK11778 putative inner membrane peptidase; Provisional Back     alignment and domain information
>PRK10949 protease 4; Provisional Back     alignment and domain information
>TIGR00515 accD acetyl-CoA carboxylase, carboxyl transferase, beta subunit Back     alignment and domain information
>PRK05654 acetyl-CoA carboxylase subunit beta; Validated Back     alignment and domain information
>PF01343 Peptidase_S49: Peptidase family S49 peptidase classification Back     alignment and domain information
>COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism] Back     alignment and domain information
>CHL00174 accD acetyl-CoA carboxylase beta subunit; Reviewed Back     alignment and domain information
>PRK12552 ATP-dependent Clp protease-like protein; Reviewed Back     alignment and domain information
>COG0740 ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] Back     alignment and domain information
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] Back     alignment and domain information
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit Back     alignment and domain information
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily Back     alignment and domain information
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ] Back     alignment and domain information
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit Back     alignment and domain information
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain Back     alignment and domain information
>COG1030 NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein Back     alignment and domain information
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain Back     alignment and domain information
>COG0777 AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism] Back     alignment and domain information
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type Back     alignment and domain information
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism] Back     alignment and domain information
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ] Back     alignment and domain information
>PRK10949 protease 4; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query338
3bpt_A363 Crystal Structure Of Human Beta-Hydroxyisobutyryl-C 7e-42
4hdt_A353 Crystal Structure Of A Carnitinyl-Coa Dehydratase F 4e-36
4j2u_A365 Crystal Structure Of An Enoyl-coa Hydratase From Rh 8e-35
3ju1_A407 Crystal Structure Of Enoyl-Coa HydrataseISOMERASE F 2e-22
3qxz_A265 Crystal Structure Of A Probable Enoyl-Coa Hydratase 2e-04
>pdb|3BPT|A Chain A, Crystal Structure Of Human Beta-Hydroxyisobutyryl-Coa Hydrolase In Complex With Quercetin Length = 363 Back     alignment and structure 
Iteration: 1

 Score =  167 bits (423), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 105/286 (36%), Positives = 159/286 (55%), Gaps = 26/286 (9%)
Query: 50  FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPD 109
           F  EY L   +   +KPY++L+ G+T G G+G+S HG++R+ TEK L A PE  IGLFPD
Sbjct: 88  FREEYXLNNAVGSCQKPYVALIHGITXGGGVGLSVHGQFRVATEKCLFAXPETAIGLFPD 147
Query: 110 VGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTF 169
           VG  Y   +    G +G +L +TG R+    D   AG+ T +V S  L  L+E LLA+  
Sbjct: 148 VGGGYFLPRLQ--GKLGYFLALTGFRLKG-RDVYRAGIATHFVDSEKLAXLEEDLLAL-- 202
Query: 170 SEDPHQDIVALLAKYSSDPEGEAPLKLLLPQ----ITSCFSSEKSVRQIIEELKKHQSSA 225
                ++I ++L  Y ++ + +     +L +    I SCFS+  +V +IIE L++  SS 
Sbjct: 203 KSPSKENIASVLENYHTESKIDRDKSFILEEHXDKINSCFSA-NTVEEIIENLQQDGSS- 260
Query: 226 ETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 285
                 +A E L+ + K +P SL +T +   + +S           L  V+  EYR++  
Sbjct: 261 ------FALEQLKVINKXSPTSLKITLRQLXEGSS---------KTLQEVLTXEYRLSQA 305
Query: 286 SSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGT 331
                DF EGVRAVL+DKDQ+PKW PA L+EV + ++   F+ LG+
Sbjct: 306 CXRGHDFHEGVRAVLIDKDQSPKWKPADLKEVTEEDLNNHFKSLGS 351
>pdb|4HDT|A Chain A, Crystal Structure Of A Carnitinyl-Coa Dehydratase From Mycobacterium Thermoresistibile Length = 353 Back     alignment and structure
>pdb|4J2U|A Chain A, Crystal Structure Of An Enoyl-coa Hydratase From Rhodobacter Sphaeroides 2.4.1 Length = 365 Back     alignment and structure
>pdb|3JU1|A Chain A, Crystal Structure Of Enoyl-Coa HydrataseISOMERASE FAMILY PROTEIN Length = 407 Back     alignment and structure
>pdb|3QXZ|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 265 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query338
3bpt_A363 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, bet 1e-107
3ju1_A407 Enoyl-COA hydratase/isomerase family protein; alph 1e-106
2f6q_A280 Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxis 5e-06
3p5m_A255 Enoyl-COA hydratase/isomerase; seattle structural 1e-05
2wtb_A 725 MFP2, fatty acid multifunctional protein (ATMFP2); 2e-05
3gow_A254 PAAG, probable enoyl-COA hydratase; the spiral fol 5e-05
1wdk_A 715 Fatty oxidation complex alpha subunit; alpha2BETA2 5e-05
3r6h_A233 Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium m 7e-05
1pjh_A280 Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral 2e-04
3zwc_A 742 Peroxisomal bifunctional enzyme; beta oxidation pa 2e-04
3qmj_A256 Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, 2e-04
2fbm_A291 Y chromosome chromodomain protein 1, telomeric IS; 2e-04
2ej5_A257 Enoyl-COA hydratase subunit II; structural genomic 3e-04
2gtr_A261 CDY-like, chromodomain Y-like protein; structural 5e-04
3hp0_A267 Putative polyketide biosynthesis enoyl-COA hydrata 7e-04
1nzy_A269 Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogen 7e-04
>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens} Length = 363 Back     alignment and structure
 Score =  316 bits (811), Expect = e-107
 Identities = 106/293 (36%), Positives = 160/293 (54%), Gaps = 26/293 (8%)

Query: 48  EVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF 107
             F  EY L   +   +KPY++L+ G+TMG G+G+S HG++R+ TEK L AMPE  IGLF
Sbjct: 86  VFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLF 145

Query: 108 PDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 167
           PDVG  Y   +  G   +G +L +TG R+    D   AG+ T +V S  L  L+E LLA+
Sbjct: 146 PDVGGGYFLPRLQGK--LGYFLALTGFRLK-GRDVYRAGIATHFVDSEKLAMLEEDLLAL 202

Query: 168 TFSEDPHQDIVALLAKYSSDP----EGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQS 223
                  ++I ++L  Y ++     +    L+  + +I SCFS+  +V +IIE L++  S
Sbjct: 203 KSPS--KENIASVLENYHTESKIDRDKSFILEEHMDKINSCFSAN-TVEEIIENLQQDGS 259

Query: 224 SAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVA 283
                   +A E L+ + K +P SL +T +         G +      L  V+  EYR++
Sbjct: 260 -------SFALEQLKVINKMSPTSLKITLRQLM-----EGSSKT----LQEVLTMEYRLS 303

Query: 284 LRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGTGVEEL 336
                  DF EGVRAVL+DKDQ+PKW PA L+EV + ++   F+ LG+   + 
Sbjct: 304 QACMRGHDFHEGVRAVLIDKDQSPKWKPADLKEVTEEDLNNHFKSLGSSDLKF 356
>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis} Length = 407 Back     alignment and structure
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3 Length = 280 Back     alignment and structure
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium} Length = 255 Back     alignment and structure
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana} Length = 725 Back     alignment and structure
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A* Length = 715 Back     alignment and structure
>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} Length = 233 Back     alignment and structure
>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A Length = 280 Back     alignment and structure
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A* Length = 742 Back     alignment and structure
>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum} Length = 256 Back     alignment and structure
>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3 Length = 291 Back     alignment and structure
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus} Length = 257 Back     alignment and structure
>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A Length = 261 Back     alignment and structure
>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis} Length = 267 Back     alignment and structure
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B* Length = 269 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query338
4hdt_A353 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carniti 100.0
3ju1_A407 Enoyl-COA hydratase/isomerase family protein; alph 100.0
3bpt_A363 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, bet 100.0
3hrx_A254 Probable enoyl-COA hydratase; the spiral fold, the 100.0
4fzw_C274 1,2-epoxyphenylacetyl-COA isomerase; structural ge 100.0
4fzw_A258 2,3-dehydroadipyl-COA hydratase; structural genomi 100.0
3kqf_A265 Enoyl-COA hydratase/isomerase family protein; IDP0 100.0
3g64_A279 Putative enoyl-COA hydratase; alpha-beta structure 100.0
3gow_A254 PAAG, probable enoyl-COA hydratase; the spiral fol 100.0
3hin_A275 Putative 3-hydroxybutyryl-COA dehydratase; structu 100.0
3pea_A261 Enoyl-COA hydratase/isomerase family protein; stru 100.0
3sll_A290 Probable enoyl-COA hydratase/isomerase; structural 100.0
3moy_A263 Probable enoyl-COA hydratase; ssgcid, seattle stru 100.0
3h81_A278 Enoyl-COA hydratase ECHA8; niaid, decode, infectio 100.0
3p5m_A255 Enoyl-COA hydratase/isomerase; seattle structural 100.0
3i47_A268 Enoyl COA hydratase/isomerase (crotonase); structu 100.0
3myb_A286 Enoyl-COA hydratase; ssgcid, struct genomics, seat 100.0
1hzd_A272 AUH, AU-binding protein/enoyl-COA hydratase; RNA-b 100.0
2ppy_A265 Enoyl-COA hydratase; beta-oxidation, fatty acid me 100.0
2fbm_A291 Y chromosome chromodomain protein 1, telomeric IS; 100.0
1nzy_A269 Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogen 100.0
2pbp_A258 Enoyl-COA hydratase subunit I; B-oxidation, struct 100.0
2gtr_A261 CDY-like, chromodomain Y-like protein; structural 100.0
2vx2_A287 Enoyl-COA hydratase domain-containing protein 3; i 100.0
1dci_A275 Dienoyl-COA isomerase; lyase; 1.50A {Rattus norveg 100.0
2ej5_A257 Enoyl-COA hydratase subunit II; structural genomic 100.0
3oc7_A267 Enoyl-COA hydratase; seattle structural genomics c 100.0
3rsi_A265 Putative enoyl-COA hydratase/isomerase; structural 100.0
4f47_A278 Enoyl-COA hydratase ECHA19; ssgcid, seattle struct 100.0
3fdu_A266 Putative enoyl-COA hydratase/isomerase; structural 100.0
3qk8_A272 Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SB 100.0
3tlf_A274 Enoyl-COA hydratase/isomerase; structural genomics 100.0
3lke_A263 Enoyl-COA hydratase; nysgrc, target 112 structural 100.0
3qre_A298 Enoyl-COA hydratase, ECHA12_1; structural genomics 100.0
1uiy_A253 Enoyl-COA hydratase; lyase, beta-oxidation, croton 100.0
1wz8_A264 Enoyl-COA hydratase; lyase, crotonase, hexamer, st 100.0
3swx_A265 Probable enoyl-COA hydratase/isomerase; structural 100.0
1mj3_A260 Enoyl-COA hydratase, mitochondrial; homohexamer, l 100.0
3r9t_A267 ECHA1_1; ssgcid, seattle structural genomics cente 100.0
3qxz_A265 Enoyl-COA hydratase/isomerase; structural genomics 100.0
1ef8_A261 Methylmalonyl COA decarboxylase; lyase; 1.85A {Esc 100.0
2j5i_A276 P-hydroxycinnamoyl COA hydratase/lyase; vanillin, 100.0
3trr_A256 Probable enoyl-COA hydratase/isomerase; ssgcid, st 100.0
3hp0_A267 Putative polyketide biosynthesis enoyl-COA hydrata 100.0
4eml_A275 Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coe 100.0
3qxi_A265 Enoyl-COA hydratase ECHA1; structural genomics, se 100.0
2f6q_A280 Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxis 100.0
3t89_A289 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase 100.0
3r9q_A262 Enoyl-COA hydratase/isomerase; ssgcid, lyase,isome 100.0
1sg4_A260 3,2-trans-enoyl-COA isomerase, mitochondrial; crot 100.0
3rrv_A276 Enoyl-COA hydratase/isomerase; structural genomics 100.0
3gkb_A287 Putative enoyl-COA hydratase; structural genomics, 100.0
3qmj_A256 Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, 100.0
3t8b_A334 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase 100.0
2uzf_A273 Naphthoate synthase; lyase, menaquinone biosynthes 100.0
2a7k_A250 CARB; crotonase, antibiotic, beta-lactam, biosynth 100.0
4di1_A277 Enoyl-COA hydratase ECHA17; structural genomics, s 100.0
3l3s_A263 Enoyl-COA hydratase/isomerase family protein; crot 100.0
3he2_A264 Enoyl-COA hydratase ECHA6; fatty acid metabolism, 100.0
3pe8_A256 Enoyl-COA hydratase; emerald biostructures, struct 100.0
3isa_A254 Putative enoyl-COA hydratase/isomerase; structural 100.0
3lao_A258 Enoyl-COA hydratase/isomerase; alpha-beta sandwich 100.0
3h0u_A289 Putative enoyl-COA hydratase; structural genomics, 100.0
3m6n_A305 RPFF protein; enoyl-COA hydratase, lyase; 1.80A {X 100.0
2q35_A243 CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} 100.0
3ot6_A232 Enoyl-COA hydratase/isomerase family protein; stru 100.0
3r6h_A233 Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium m 100.0
1pjh_A280 Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral 100.0
2j5g_A263 ALR4455 protein; enzyme evolution, C-C bond hydrol 100.0
3njd_A333 Enoyl-COA hydratase; ssgcid, mycobacerium smegmati 100.0
1szo_A257 6-oxocamphor hydrolase; enzyme-product complex; HE 100.0
2np9_A440 DPGC; protein inhibitor complex, oxidoreductase; H 100.0
1wdk_A 715 Fatty oxidation complex alpha subunit; alpha2BETA2 100.0
3zwc_A 742 Peroxisomal bifunctional enzyme; beta oxidation pa 100.0
2wtb_A 725 MFP2, fatty acid multifunctional protein (ATMFP2); 100.0
3t3w_A279 Enoyl-COA hydratase; ssgcid, structural genomics, 100.0
2w3p_A 556 Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ri 99.96
3rst_A240 Signal peptide peptidase SPPA; alpha/beta protein 99.54
3bf0_A593 Protease 4; bacterial, hydrolase, inner membrane, 99.5
3viv_A230 441AA long hypothetical NFED protein; protein-pept 99.46
2f9y_A339 Acetyl-COA carboxylase, carboxyltransferase alpha; 99.34
2f9i_A327 Acetyl-coenzyme A carboxylase carboxyl transferase 99.33
1y7o_A218 ATP-dependent CLP protease proteolytic subunit; hy 99.32
2f9y_B304 Acetyl-coenzyme A carboxylase carboxyl transferas 99.13
2cby_A208 ATP-dependent CLP protease proteolytic subunit 1; 98.46
2f6i_A215 ATP-dependent CLP protease, putative; structural g 97.98
3qwd_A203 ATP-dependent CLP protease proteolytic subunit; ca 97.98
1yg6_A193 ATP-dependent CLP protease proteolytic subunit; en 97.9
1tg6_A277 Putative ATP-dependent CLP protease proteolytic S; 97.79
3p2l_A201 ATP-dependent CLP protease proteolytic subunit; st 97.63
4gm2_A205 ATP-dependent CLP protease proteolytic subunit; st 97.48
1pix_A 587 Glutaconyl-COA decarboxylase A subunit; biotin-dep 97.37
2f9i_B285 Acetyl-coenzyme A carboxylase carboxyl transferase 97.34
3iav_A 530 Propionyl-COA carboxylase complex B subunit; accas 97.02
1on3_A523 Methylmalonyl-COA carboxyltransferase 12S subunit; 96.99
3n6r_B531 Propionyl-COA carboxylase, beta subunit; protein c 96.84
1x0u_A522 Hypothetical methylmalonyl-COA decarboxylase ALPH; 96.75
2w3p_A556 Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ri 96.74
3bf0_A 593 Protease 4; bacterial, hydrolase, inner membrane, 96.54
3u9r_B555 MCC beta, methylcrotonyl-COA carboxylase, beta-sub 96.26
2bzr_A 548 Propionyl-COA carboxylase beta chain 5; fatty acid 96.23
1x0u_A522 Hypothetical methylmalonyl-COA decarboxylase ALPH; 96.11
1vrg_A527 Propionyl-COA carboxylase, beta subunit; TM0716, s 96.03
3gf3_A 588 Glutaconyl-COA decarboxylase subunit A; sodium ION 95.31
2bzr_A548 Propionyl-COA carboxylase beta chain 5; fatty acid 94.78
1on3_A523 Methylmalonyl-COA carboxyltransferase 12S subunit; 94.58
3n6r_B531 Propionyl-COA carboxylase, beta subunit; protein c 94.42
1vrg_A527 Propionyl-COA carboxylase, beta subunit; TM0716, s 94.32
3iav_A530 Propionyl-COA carboxylase complex B subunit; accas 94.11
1pix_A587 Glutaconyl-COA decarboxylase A subunit; biotin-dep 94.08
3k8x_A 758 Acetyl-COA carboxylase; transferase, carboxyltrans 92.87
2x24_A 793 Acetyl-COA carboxylase; fatty acid biosynthesis, l 91.8
3gf3_A588 Glutaconyl-COA decarboxylase subunit A; sodium ION 89.67
3u9r_B555 MCC beta, methylcrotonyl-COA carboxylase, beta-sub 83.55
>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile} Back     alignment and structure
Probab=100.00  E-value=8.6e-56  Score=427.08  Aligned_cols=285  Identities=36%  Similarity=0.626  Sum_probs=250.5

Q ss_pred             ccCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEE
Q 019602           18 SSFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLL   97 (338)
Q Consensus        18 ~s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f   97 (338)
                      ++.++++||+|+|++++..... .+......++...++++.+|.++||||||+|||+|+|||++|+++||+|||+++++|
T Consensus        60 tg~G~~~FcaG~Dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f  138 (353)
T 4hdt_A           60 TGAGERGLCAGGDVVAIYHSAK-ADGAEARRFWFDEYRLNAHIGRYPKPYVSIMDGIVMGGGVGVGAHGNVRVVTDTTKM  138 (353)
T ss_dssp             EESSSSBSBCCBCHHHHHHHHH-TTSHHHHHHHHHHHHHHHHHHHCSSCEEEEECBEEETHHHHHHTTSSEEEECTTCEE
T ss_pred             EeCCCCCEecCcCHHHHhhccc-hhhHHHHHHHHHHHHHHHHHHHCCCCEEEEeECceeecCccccCCcCeeccchhccc
Confidence            3445589999999999874332 233455667778888999999999999999999999999999999999999999999


Q ss_pred             eCCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHH
Q 019602           98 AMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDI  177 (338)
Q Consensus        98 ~~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~  177 (338)
                      ++||+++|++|++|++++|+|++| + ++++|++||++++ |+||+++||||+|||++++.+.+.+++..        .+
T Consensus       139 ~~pe~~iGl~p~~g~~~~l~rl~g-~-~a~~l~ltG~~i~-A~eA~~~GLv~~vv~~~~l~~~a~~la~~--------~~  207 (353)
T 4hdt_A          139 AMPEVGIGFIPDVGGTYLLSRAPG-K-LGLHAALTGAPFS-GADAIVMGFADHYVPHDKIDEFTRAVIAD--------GV  207 (353)
T ss_dssp             ECCGGGGTCCCCTTHHHHHHTSST-T-HHHHHHHHCCCBC-HHHHHHHTSCSEECCGGGHHHHHHHHHHH--------CH
T ss_pred             cCcccccccCCCccceehhhhhhh-H-HHHHHHhcCCCCC-HHHHHHcCCCcEEeCHHHHHHHHHHHHHh--------ch
Confidence            999999999999999999999999 5 8999999999999 99999999999999999999999887752        35


Q ss_pred             HHHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHH
Q 019602          178 VALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSK  257 (338)
Q Consensus       178 ~~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~  257 (338)
                      ...+..|... .+...+...++.|++||+.+ ++++|+..|++..       ..|+.++.+.|+++||.+++.+|+++++
T Consensus       208 ~~~l~~~~~~-~~~~~l~~~~~~i~~~f~~~-~~~~i~~~L~~~~-------~~~a~~~a~~la~~sP~a~~~~k~~l~~  278 (353)
T 4hdt_A          208 DAALAAHAQE-PPASPLAEQRSWIDECYTGD-TVADIIAALRAHD-------APAAGEAADLIATRSPIALSVTLESVRR  278 (353)
T ss_dssp             HHHHHHHCBC-CCCCHHHHTHHHHHHHTTCS-SHHHHHHHHHHHC-------SHHHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred             hHHHHHhccc-CCccchHHHHHHHHHHhCCC-CHHHHHHHHHhcc-------cHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence            5566666554 34567888999999999987 9999999999866       5789999999999999999999999999


Q ss_pred             HhhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCCCCCCcCCCCHHHHHhhhcCCCC
Q 019602          258 VASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKWNPASLEEVNQSEVEALFEPLGT  331 (338)
Q Consensus       258 ~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w~~~~~~~v~~~~v~~~~~~~~~  331 (338)
                      +.        ...+++++++.|++++..++.++||+||++|||++|+|.|+|++++++||+++.|+.+|+|++.
T Consensus       279 ~~--------~~~sl~e~l~~E~~~~~~~~~s~D~~EGvrAfl~dekR~P~w~p~~l~~V~~~~v~~~f~p~~~  344 (353)
T 4hdt_A          279 AA--------KLQSLEDTLRQEYRVSCASLKSHDLVEGIRAQLVDKDRNPKWRPATLAEVTEADVEAYFAPVDP  344 (353)
T ss_dssp             HT--------TCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHC----CCCCSSCSGGGCCHHHHHGGGCCCSS
T ss_pred             hc--------cCCCHHHHHHHHHHHHHHHhCCchHHHHHhhhhhCcCCCCCCCCCChhhCCHHHHHHHcCCCCC
Confidence            87        1347999999999999999999999999999986555899999999999999999999999975
>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis} Back     alignment and structure
>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens} Back     alignment and structure
>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus} Back     alignment and structure
>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli} Back     alignment and structure
>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli} Back     alignment and structure
>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis} Back     alignment and structure
>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3} Back     alignment and structure
>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris} Back     alignment and structure
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis} Back     alignment and structure
>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus} Back     alignment and structure
>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis} Back     alignment and structure
>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A* Back     alignment and structure
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium} Back     alignment and structure
>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0 Back     alignment and structure
>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis} Back     alignment and structure
>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A Back     alignment and structure
>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus} Back     alignment and structure
>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3 Back     alignment and structure
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B* Back     alignment and structure
>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A Back     alignment and structure
>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A Back     alignment and structure
>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens} Back     alignment and structure
>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A Back     alignment and structure
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus} Back     alignment and structure
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0 Back     alignment and structure
>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus} Back     alignment and structure
>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum} Back     alignment and structure
>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii} Back     alignment and structure
>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A Back     alignment and structure
>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0 Back     alignment and structure
>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans} Back     alignment and structure
>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M} Back     alignment and structure
>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3 Back     alignment and structure
>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3 Back     alignment and structure
>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus} Back     alignment and structure
>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A* Back     alignment and structure
>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A Back     alignment and structure
>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0 Back     alignment and structure
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A* Back     alignment and structure
>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C* Back     alignment and structure
>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus} Back     alignment and structure
>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis} Back     alignment and structure
>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP} Back     alignment and structure
>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum} Back     alignment and structure
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3 Back     alignment and structure
>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A Back     alignment and structure
>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A Back     alignment and structure
>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A Back     alignment and structure
>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp} Back     alignment and structure
>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis} Back     alignment and structure
>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum} Back     alignment and structure
>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A Back     alignment and structure
>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus} Back     alignment and structure
>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A* Back     alignment and structure
>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum} Back     alignment and structure
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi} Back     alignment and structure
>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis} Back     alignment and structure
>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A Back     alignment and structure
>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis} Back     alignment and structure
>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa} Back     alignment and structure
>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis} Back     alignment and structure
>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A Back     alignment and structure
>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A Back     alignment and structure
>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV} Back     alignment and structure
>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A* Back     alignment and structure
>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A Back     alignment and structure
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D Back     alignment and structure
>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A Back     alignment and structure
>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A Back     alignment and structure
>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A* Back     alignment and structure
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A* Back     alignment and structure
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A* Back     alignment and structure
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A Back     alignment and structure
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans} Back     alignment and structure
>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis} Back     alignment and structure
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A Back     alignment and structure
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A Back     alignment and structure
>2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4 Back     alignment and structure
>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus} Back     alignment and structure
>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1 Back     alignment and structure
>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4 Back     alignment and structure
>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A Back     alignment and structure
>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics conso SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1 Back     alignment and structure
>3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A Back     alignment and structure
>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A Back     alignment and structure
>1tg6_A Putative ATP-dependent CLP protease proteolytic S; mitochondrial CLPP, CLP/HSP 100, ATP-dependent protease, HYD; HET: FME; 2.10A {Homo sapiens} SCOP: c.14.1.1 Back     alignment and structure
>3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp} SCOP: c.14.1.1 Back     alignment and structure
>4gm2_A ATP-dependent CLP protease proteolytic subunit; structural genomics, structural genomics consortium, SGC, PR hydrolase; 2.80A {Plasmodium falciparum} PDB: 4hnk_A Back     alignment and structure
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4 Back     alignment and structure
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus} Back     alignment and structure
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A Back     alignment and structure
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A* Back     alignment and structure
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans} Back     alignment and structure
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii} Back     alignment and structure
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans} Back     alignment and structure
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A Back     alignment and structure
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B Back     alignment and structure
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A Back     alignment and structure
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii} Back     alignment and structure
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4 Back     alignment and structure
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A* Back     alignment and structure
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A Back     alignment and structure
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A* Back     alignment and structure
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans} Back     alignment and structure
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4 Back     alignment and structure
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A Back     alignment and structure
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4 Back     alignment and structure
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A Back     alignment and structure
>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A* Back     alignment and structure
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A* Back     alignment and structure
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 338
d1mj3a_260 c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat 8e-12
>d1mj3a_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 260 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Enoyl-CoA hydratase (crotonase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 62.5 bits (151), Expect = 8e-12
 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 1/83 (1%)

Query: 55  SLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSY 114
           S    I+  KKP I+ ++G  +G G  ++         EK     PE  +G  P  G + 
Sbjct: 88  SHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQ 147

Query: 115 IAAKGPGGGSVGAYLGMTGKRIS 137
              +   G S+   + +TG RIS
Sbjct: 148 RLTRAV-GKSLAMEMVLTGDRIS 169

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query338
d2fw2a1258 Chromodomain protein CDY2A {Human (Homo sapiens) [ 100.0
d1hzda_266 AUH protein {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1mj3a_260 Enoyl-CoA hydratase (crotonase) {Rat (Rattus norve 100.0
d1wz8a1263 Probable enoyl-CoA hydratase TTHA0218 {Thermus the 100.0
d1uiya_253 Enoyl-CoA hydratase (crotonase) {Thermus thermophi 100.0
d1dcia_275 Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso 100.0
d1ef8a_261 Methylmalonyl CoA decarboxylase {Escherichia coli 100.0
d1nzya_269 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., 100.0
d1q52a_297 Naphthoate synthase MenB {Mycobacterium tuberculos 100.0
d2f6qa1245 Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human ( 100.0
d1wdka4310 Fatty oxidation complex alpha subunit, N-terminal 100.0
d1sg4a1249 Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso 100.0
d2a7ka1230 Carbapenem biosynthes protein CarB {Pectobacterium 100.0
d1pjha_266 Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso 100.0
d1szoa_249 6-oxo camphor hydrolase {Rhodococcus erythropolis 99.98
d2cbya1179 Clp protease, ClpP subunit {Mycobacterium tubercul 97.92
d1yg6a1183 Clp protease, ClpP subunit {Escherichia coli [TaxI 97.87
d1y7oa1192 Clp protease, ClpP subunit {Streptococcus pneumoni 97.84
d2f6ia1190 Clp protease, ClpP subunit {Plasmodium falciparum 97.74
d1tg6a1193 Clp protease, ClpP subunit {Human (Homo sapiens), 97.71
d2f9ya1316 Acetyl-coenzyme A carboxylase carboxyl transferase 97.4
d2f9yb1263 Acetyl-coenzyme A carboxylase carboxyl transferase 96.97
d2a7sa1258 Propionyl-CoA carboxylase complex B subunit, PccB 96.54
d1pixa2287 Glutaconyl-CoA decarboxylase A subunit {Acidaminoc 96.46
d1vrga1251 Propionyl-CoA carboxylase complex B subunit, PccB 96.36
d1on3a1253 Methylmalonyl-CoA carboxyltransferase (transcarbox 96.26
d2a7sa2271 Propionyl-CoA carboxylase complex B subunit, PccB 95.16
d1xnya1258 Propionyl-CoA carboxylase complex B subunit, PccB 94.62
d1uyra1333 Acetyl-coenzyme A carboxylase {Baker's yeast (Sacc 94.52
d1vrga2264 Propionyl-CoA carboxylase complex B subunit, PccB 94.46
d1on3a2264 Methylmalonyl-CoA carboxyltransferase (transcarbox 93.52
d1pixa3299 Glutaconyl-CoA decarboxylase A subunit {Acidaminoc 90.99
d1uyra2404 Acetyl-coenzyme A carboxylase {Baker's yeast (Sacc 90.42
d1xnya2263 Propionyl-CoA carboxylase complex B subunit, PccB 89.65
>d2fw2a1 c.14.1.3 (A:3-260) Chromodomain protein CDY2A {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Chromodomain protein CDY2A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-44  Score=331.83  Aligned_cols=206  Identities=15%  Similarity=0.153  Sum_probs=188.2

Q ss_pred             cCCCCeEEcCCChhHHhhhhccCChHHHHHHHHHHHHHHHHHhhCCCcEEEEecCccchhhhHhhhcCCeEEEeCCeEEe
Q 019602           19 SFPNNAVICGQSPLNHLQSTTQNQLSEMIEVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA   98 (338)
Q Consensus        19 s~~~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pkPvIaavnG~a~GgG~~Lal~cD~rias~~a~f~   98 (338)
                      +..|++||+|+|+.++.......+.....++.....+++..+.++||||||+|||+|+|||++|+++||+||++++++|+
T Consensus        53 ~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~  132 (258)
T d2fw2a1          53 SAAGSVFCCGLDFGYFVRHLRNDRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQ  132 (258)
T ss_dssp             EECSSCSBCCBCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEEE
T ss_pred             ecCccccccccccchhhhcccccccchhhHHHHHHHHHHHhhhccceeeeeecccccccccccccccccccceeccccee
Confidence            34679999999999987544444444455677778889999999999999999999999999999999999999999999


Q ss_pred             CCCCCcCcCCCchHHHHHhcCCCChHHHHHHhhcCCCCCcHHHHHHcCccceecCCCChHHHHHHHHhcccCCCchhHHH
Q 019602           99 MPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIV  178 (338)
Q Consensus        99 ~pe~~lGl~P~~g~~~~l~rl~G~~~~a~~llltg~~~~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~  178 (338)
                      +||+++|++|++|+++++++++|.+ ++++|++||++++ |++|+++||||+|||++++.+.+.                
T Consensus       133 ~pe~~~Gl~p~~g~~~~l~r~ig~~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~----------------  194 (258)
T d2fw2a1         133 TPYTTFGQSPDGCSSITFPKMMGKA-SANEMLIAGRKLT-AREACAKGLVSQVFLTGTFTQEVM----------------  194 (258)
T ss_dssp             CCHHHHTCCCCTTHHHHHHHHHCHH-HHHHHHTTCCEEE-HHHHHHTTSCSEEECSTTHHHHHH----------------
T ss_pred             eccccccccccccccccchhhcCcc-ccchhhccCcccc-cccccccccccccccccccccccc----------------
Confidence            9999999999999999999999998 9999999999999 999999999999999999887653                


Q ss_pred             HHHHhhcCCCCCCccccccchhhhhhcCCCCCHHHHHHHHHhcccccchhHHHHHHHHHHHHhccCchHHHHHHHHHHHH
Q 019602          179 ALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKV  258 (338)
Q Consensus       179 ~~l~~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~ei~~~L~~~~~~~~~~~~~~A~~~~~~l~~~sp~al~~~k~~l~~~  258 (338)
                                                                          +||+    +|+..||.+++.+|++++..
T Consensus       195 ----------------------------------------------------~~a~----~i~~~~~~a~~~~K~~~~~~  218 (258)
T d2fw2a1         195 ----------------------------------------------------IQIK----ELASYNAIVLEECKALVRCN  218 (258)
T ss_dssp             ----------------------------------------------------HHHH----HHTTSCHHHHHHHHHHHHHH
T ss_pred             ----------------------------------------------------hhhh----hhhhhhHHHHHHHHHHHHHh
Confidence                                                                5777    99999999999999999988


Q ss_pred             hhhcCCCccccCCHHHHHHHHHHHHhhhCCCCCHHHHHHhhhcCCCCCCCC
Q 019602          259 ASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQNPKW  309 (338)
Q Consensus       259 ~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~d~~eg~~afl~eK~r~p~w  309 (338)
                      .         ..+++++++.|.+.+..++.++|++||+++|+ || |+|+|
T Consensus       219 ~---------~~~l~~~~~~e~~~~~~~~~s~d~~Egi~af~-EK-R~p~f  258 (258)
T d2fw2a1         219 I---------KLELEQANERECEVLRKIWSSAQGIESMLKYV-EN-KIDEF  258 (258)
T ss_dssp             H---------HHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHH-HS-SCCCC
T ss_pred             h---------cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHh-CC-CCCCC
Confidence            7         66899999999999999999999999999999 79 99998
>d1hzda_ c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mj3a_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1wz8a1 c.14.1.3 (A:2-264) Probable enoyl-CoA hydratase TTHA0218 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1uiya_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1dcia_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1ef8a_ c.14.1.3 (A:) Methylmalonyl CoA decarboxylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nzya_ c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., strain CBS-3 [TaxId: 306]} Back     information, alignment and structure
>d1q52a_ c.14.1.3 (A:) Naphthoate synthase MenB {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2f6qa1 c.14.1.3 (A:108-352) Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wdka4 c.14.1.3 (A:1-310) Fatty oxidation complex alpha subunit, N-terminal domain {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d1sg4a1 c.14.1.3 (A:2-250) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Back     information, alignment and structure
>d2a7ka1 c.14.1.3 (A:1-230) Carbapenem biosynthes protein CarB {Pectobacterium carotovorum [TaxId: 554]} Back     information, alignment and structure
>d1pjha_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1szoa_ c.14.1.3 (A:) 6-oxo camphor hydrolase {Rhodococcus erythropolis [TaxId: 1833]} Back     information, alignment and structure
>d2cbya1 c.14.1.1 (A:15-193) Clp protease, ClpP subunit {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1yg6a1 c.14.1.1 (A:11-193) Clp protease, ClpP subunit {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1y7oa1 c.14.1.1 (A:2-193) Clp protease, ClpP subunit {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d2f6ia1 c.14.1.1 (A:177-366) Clp protease, ClpP subunit {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d1tg6a1 c.14.1.1 (A:1-193) Clp protease, ClpP subunit {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Back     information, alignment and structure
>d2f9ya1 c.14.1.4 (A:4-319) Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, AccA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2f9yb1 c.14.1.4 (B:23-285) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, AccD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2a7sa1 c.14.1.4 (A:20-277) Propionyl-CoA carboxylase complex B subunit, PccB {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1pixa2 c.14.1.4 (A:1-287) Glutaconyl-CoA decarboxylase A subunit {Acidaminococcus fermentans [TaxId: 905]} Back     information, alignment and structure
>d1vrga1 c.14.1.4 (A:1-251) Propionyl-CoA carboxylase complex B subunit, PccB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1on3a1 c.14.1.4 (A:8-260) Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) {Propionibacterium freudenreichii [TaxId: 1744]} Back     information, alignment and structure
>d2a7sa2 c.14.1.4 (A:278-548) Propionyl-CoA carboxylase complex B subunit, PccB {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1xnya1 c.14.1.4 (A:10-267) Propionyl-CoA carboxylase complex B subunit, PccB {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1uyra1 c.14.1.4 (A:1482-1814) Acetyl-coenzyme A carboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1vrga2 c.14.1.4 (A:252-515) Propionyl-CoA carboxylase complex B subunit, PccB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1on3a2 c.14.1.4 (A:261-524) Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) {Propionibacterium freudenreichii [TaxId: 1744]} Back     information, alignment and structure
>d1pixa3 c.14.1.4 (A:288-586) Glutaconyl-CoA decarboxylase A subunit {Acidaminococcus fermentans [TaxId: 905]} Back     information, alignment and structure
>d1uyra2 c.14.1.4 (A:1815-2218) Acetyl-coenzyme A carboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1xnya2 c.14.1.4 (A:268-530) Propionyl-CoA carboxylase complex B subunit, PccB {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure