Citrus Sinensis ID: 019662

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------
Protein Sequence
MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALGG
Secondary Structure (PSIPRED)
ccccccccccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccEEEcccEEEEEEEEEEcccccEEcccEEEEEEEccccccccEEEEccccccccccccccEEEEEEEccccccEEEcccEEEEEEccHHHHccccEEEEEcccccEEEEEcccccccccEEEEccccccccccccccccEEEEEEEEccccccHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccHHHEccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcHHHcccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccEEcHHHHccccEEEEEcccccccccccccccccccccccccccccccccccccEEEEccccccccccEEEEEEEEEEEEEccccccccEEEEccccccccccccccEEEEEEEcccccEEEccccEEEEEEEcHHHHHcccEEEEEcccccEEEEEccccccccEEEEEccccccccccccccccEEEEEEEEccccccHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MGMDYYNILKVNKNATEDDLKKSYRKLAMKwhpdknpndkkEAEARFKQISEAYEVlsdpqkraIYDQygeeglkdmppssssgysyangsggnskgfnprnaedifaeffgsspfgfgsagpgkstrfqsegggtfggfgmgenifrtysdgsvprkpppvesklpcsleelysgstrkmkISRTVVdangrqtpeseiltidvkpgwkkgtkitfpdkgneqpnqlpadlvfvidekphdvykrdsndliVNHKVSLAEalggtsvslitldgrdlniavtdiispgfelgipgegmpiarepgnrgdlrikfevkfptkltpeQRAGLKRALGG
Flexible Loop (DISEMBL)
MGMDYYNIlkvnknateddLKKSYRKLAmkwhpdknpndkKEAEARFKQISEayevlsdpqkRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDgsvprkpppvesklpcsleelysgstrkmkisrtvvdangrqtpeseiltidvkpgwkkGTKItfpdkgneqpnQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEvkfptkltpeqraglkralgg
Low Complexity Region (SEG)
MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPssssgysyangsggnsKGFNPRNAEDIfaeffgsspfgfgsagpgKSTRFQSEgggtfggfgmgENIFRTYSDGSVPRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALGG
Disordered region (IsUnstruct)
****YYNILKV**********************************************************************************************IFAEFFG************************FGGFGMGENIFRT**************************************************ILTIDVKPGWKKGTKIT************PADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGM***********LRIKFEVK*******************
Disordered Region (DISOPRED)
MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEG*******************GNSKGFNPRNAEDI************************************************************PCSLEELYSGSTRKMK*****************ILTIDVKPGWKKGTKIT***********LPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALGG
Disordered Region (DISEMBL)
MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALGG
Disordered Region (DISPRO)
*GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALGG
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALGG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	337	2.2.26 [Sep-21-2011]
Q5R8J8	337	DnaJ homolog subfamily B	yes	no	0.964	0.964	0.447	1e-71
Q9UDY4	337	DnaJ homolog subfamily B	yes	no	0.964	0.964	0.447	2e-71
Q9D832	337	DnaJ homolog subfamily B	yes	no	0.964	0.964	0.441	3e-71
Q2KIT4	337	DnaJ homolog subfamily B	yes	no	0.964	0.964	0.441	3e-70
Q3MI00	340	DnaJ homolog subfamily B	no	no	0.958	0.95	0.431	3e-67
O89114	348	DnaJ homolog subfamily B	no	no	0.958	0.928	0.431	1e-66
O75953	348	DnaJ homolog subfamily B	no	no	0.958	0.928	0.428	2e-66
Q5BIP8	348	DnaJ homolog subfamily B	no	no	0.961	0.931	0.426	4e-66
Q9QYJ3	340	DnaJ homolog subfamily B	no	no	0.973	0.964	0.431	9e-66
P25685	340	DnaJ homolog subfamily B	no	no	0.958	0.95	0.434	1e-65

>sp|Q5R8J8|DNJB4_PONAB DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2 SV=1

 Score =  270 bits (690), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 154/344 (44%), Positives = 218/344 (63%), Gaps = 19/344 (5%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
           MG DYY IL + K A+++D+KK+YRK A+K+HPDKN +   +AE +FK+++EAYEVLSDP
Sbjct: 1   MGKDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKS--PQAEEKFKEVAEAYEVLSDP 58

Query: 61  QKRAIYDQYGEEGLKDMPPSSSSGY-SYANGSGGNSKGFNPRNAEDIFAEFFG-SSPFG- 117
           +KR IYDQ+GEEGLK     +     ++     G+            FA FFG S+PF  
Sbjct: 59  KKREIYDQFGEEGLKGGAGGTDGQGGTFRYTFHGDPHA--------TFAAFFGGSNPFEI 110

Query: 118 -FGS-AGPGKSTRFQSEGGGTFGGFGMGENIF---RTYSDGSVPRKPPPVESKLPCSLEE 172
            FG   G G+ +      G  F  FG   N +   R     S  ++ PPV  +L  SLEE
Sbjct: 111 FFGRRMGGGRDSEEMEMDGDPFSAFGFSMNGYPRDRNSVGPSRLKQDPPVIHELRVSLEE 170

Query: 173 LYSGSTRKMKISRTVVDANGRQ-TPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPAD 231
           +YSG T++MKISR  ++A+GR    E +ILTI++K GWK+GTKITFP +G+E PN +PAD
Sbjct: 171 IYSGCTKRMKISRKRLNADGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPAD 230

Query: 232 LVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFE 291
           +VF+I +K H  +KRD +++I   K+SL EAL G S+++ TLDGR++ ++V DI+ PG  
Sbjct: 231 IVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRNIPMSVNDIVKPGMR 290

Query: 292 LGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL 335
             I G G+P  + P  RGDL I+FEV FP  ++   +  L++ L
Sbjct: 291 RRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHL 334

Probable chaperone.
Pongo abelii (taxid: 9601)

>sp|Q9UDY4|DNJB4_HUMAN DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1

 Score =  270 bits (689), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 154/344 (44%), Positives = 218/344 (63%), Gaps = 19/344 (5%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
           MG DYY IL + K A+++D+KK+YRK A+K+HPDKN +   +AE +FK+++EAYEVLSDP
Sbjct: 1   MGKDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKS--PQAEEKFKEVAEAYEVLSDP 58

Query: 61  QKRAIYDQYGEEGLKDMPPSSSSGY-SYANGSGGNSKGFNPRNAEDIFAEFFG-SSPFG- 117
           +KR IYDQ+GEEGLK     +     ++     G+            FA FFG S+PF  
Sbjct: 59  KKREIYDQFGEEGLKGGAGGTDGQGGTFRYTFHGDPHA--------TFAAFFGGSNPFEI 110

Query: 118 -FGS-AGPGKSTRFQSEGGGTFGGFGMGENIF---RTYSDGSVPRKPPPVESKLPCSLEE 172
            FG   G G+ +      G  F  FG   N +   R     S  ++ PPV  +L  SLEE
Sbjct: 111 FFGRRMGGGRDSEEMEIDGDPFSAFGFSMNGYPRDRNSVGPSRLKQDPPVIHELRVSLEE 170

Query: 173 LYSGSTRKMKISRTVVDANGRQ-TPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPAD 231
           +YSG T++MKISR  ++A+GR    E +ILTI++K GWK+GTKITFP +G+E PN +PAD
Sbjct: 171 IYSGCTKRMKISRKRLNADGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPAD 230

Query: 232 LVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFE 291
           +VF+I +K H  +KRD +++I   K+SL EAL G S+++ TLDGR++ ++V DI+ PG  
Sbjct: 231 IVFIIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRNIPMSVNDIVKPGMR 290

Query: 292 LGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL 335
             I G G+P  + P  RGDL I+FEV FP  ++   +  L++ L
Sbjct: 291 RRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHL 334

Probable chaperone.

Homo sapiens (taxid: 9606)

>sp|Q9D832|DNJB4_MOUSE DnaJ homolog subfamily B member 4 OS=Mus musculus GN=Dnajb4 PE=2 SV=1

 Score =  268 bits (686), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 152/344 (44%), Positives = 220/344 (63%), Gaps = 19/344 (5%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
           MG DYY+IL ++K AT++D+KK+YRK A+K+HPDKN +   +AE +FK+++EAYEVLSDP
Sbjct: 1   MGKDYYHILGIDKGATDEDVKKAYRKQALKFHPDKNKS--PQAEEKFKEVAEAYEVLSDP 58

Query: 61  QKRAIYDQYGEEGLKDMPPSSSSGY-SYANGSGGNSKGFNPRNAEDIFAEFFG-SSPFG- 117
           +KR IYDQ+GEEGLK     +     ++     G+            FA FFG S+PF  
Sbjct: 59  KKREIYDQFGEEGLKGGAGGTDGQGGTFRYTFHGDPHA--------TFAAFFGGSNPFEI 110

Query: 118 -FGS-AGPGKSTRFQSEGGGTFGGFGMGENIF---RTYSDGSVPRKPPPVESKLPCSLEE 172
            FG   G G+ +      G  F  FG   N +   R     S  ++ PP+  +L  SLEE
Sbjct: 111 FFGRRMGGGRDSEEMEIDGDPFSAFGFSMNGYPRDRNSVGPSRLKQDPPIIHELKVSLEE 170

Query: 173 LYSGSTRKMKISRTVVDANGRQ-TPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPAD 231
           +YSG T++MKISR  ++ +GR    E +ILTI++K GWK+GTKITFP +G+E PN +PAD
Sbjct: 171 IYSGCTKRMKISRKRLNPDGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPAD 230

Query: 232 LVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFE 291
           +VFVI +K H  +KRD ++++   K+SL EAL G S+++ T+DGR+L ++VTDI+ PG  
Sbjct: 231 IVFVIKDKEHPKFKRDGSNIVYTAKISLREALCGCSLNVPTMDGRNLPMSVTDIVKPGMR 290

Query: 292 LGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL 335
             + G G+P  + P  RGDL I+F+V FP  ++   +  L++ L
Sbjct: 291 RRVIGYGLPFPKNPDQRGDLLIEFDVSFPDVISAASKEILRKHL 334

Probable chaperone.

Mus musculus (taxid: 10090)

>sp|Q2KIT4|DNJB4_BOVIN DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1

 Score =  265 bits (678), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 152/344 (44%), Positives = 215/344 (62%), Gaps = 19/344 (5%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
           MG DYY IL + K A+++D+KK+YRK A+++HPDKN +   +AE RFK+++EAYEVLSDP
Sbjct: 1   MGKDYYCILGIEKGASDEDIKKAYRKQALRFHPDKNKS--PQAEERFKEVAEAYEVLSDP 58

Query: 61  QKRAIYDQYGEEGLKDMPPSSSSGY-SYANGSGGNSKGFNPRNAEDIFAEFFG-SSPFG- 117
           +KR IYDQ+GEEGLK     +     ++     G+            FA FFG S+PF  
Sbjct: 59  KKREIYDQFGEEGLKGGAGGTDGQGGTFRYTFHGDPHA--------TFAAFFGGSNPFEI 110

Query: 118 -FGS-AGPGKSTRFQSEGGGTFGGFGMGENIF---RTYSDGSVPRKPPPVESKLPCSLEE 172
            FG   G G+ +      G  FG FG   N +   R     S  ++ PPV  +L  SLEE
Sbjct: 111 FFGRRMGGGRDSDEMEVDGDPFGAFGFSMNGYPRDRNSVGPSRLKQDPPVIHELRVSLEE 170

Query: 173 LYSGSTRKMKISRTVVDANGRQ-TPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPAD 231
           +YSG T++MKISR  ++ +GR    E +ILTI++K GWK+GTKITFP +G+E P  +PAD
Sbjct: 171 IYSGCTKRMKISRKRLNPDGRSYRTEDKILTIEIKKGWKEGTKITFPREGDETPTSIPAD 230

Query: 232 LVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFE 291
           +VFVI +K H  +KRD +++I   K+SL EAL G S+++ T+DGR + + + DI+ PG  
Sbjct: 231 IVFVIKDKDHPKFKRDGSNIIYTAKISLREALCGCSINVPTMDGRTIPMTINDIVKPGMR 290

Query: 292 LGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL 335
             I G G+P  + P  RGDL I+FEV FP  ++   +  L++ L
Sbjct: 291 RRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHL 334

Probable chaperone.

Bos taurus (taxid: 9913)

>sp|Q3MI00|DNJB1_BOVIN DnaJ homolog subfamily B member 1 OS=Bos taurus GN=DNAJB1 PE=2 SV=3

 Score =  255 bits (651), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 151/350 (43%), Positives = 218/350 (62%), Gaps = 27/350 (7%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
           MG DYY  L + + A+++++K++YR+ A+++HPDKN   +  AE +FK+I+EAY+VLSDP
Sbjct: 1   MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKN--KEPGAEEKFKEIAEAYDVLSDP 58

Query: 61  QKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFG-SSPFG-- 117
           +KR I+D+YGEEGLK   PS  S       S   +   +P     +FAEFFG  +PF   
Sbjct: 59  RKREIFDRYGEEGLKGSGPSGGSSGGTNGTSFSYTFHGDPHA---MFAEFFGGRNPFDNF 115

Query: 118 FGSAGPGKSTRFQSEGGGT---FGGFGMGENIF--------RTYSDGSVPRKPPPVESKL 166
           FG        R   EG      F GF MG   F        R   + +  ++ PPV   L
Sbjct: 116 FGQ-------RNGEEGMDIDDPFSGFPMGMGGFTNMNFGRSRPAQEPTRKKQDPPVTHDL 168

Query: 167 PCSLEELYSGSTRKMKISRTVVDANGRQTP-ESEILTIDVKPGWKKGTKITFPDKGNEQP 225
             SLEE+YSG T+KMKIS   ++ +G+    E +ILTI+VK GWK+GTKITFP +G++  
Sbjct: 169 RVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQTS 228

Query: 226 NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDI 285
           N +PAD+VFV+ +KPH+++KRD +D+I   ++SL EAL G +V++ TLDGR + +   D+
Sbjct: 229 NNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDV 288

Query: 286 ISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL 335
           I PG    +PGEG+P+ + P  RGDL I+FEV FP ++    R  L++ L
Sbjct: 289 IRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL 338

Interacts with HSP70 and can stimulate its ATPase activity. Stimulates the association between HSC70 and HIP.

Bos taurus (taxid: 9913)

>sp|O89114|DNJB5_MOUSE DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2 SV=1

 Score =  253 bits (647), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 154/357 (43%), Positives = 217/357 (60%), Gaps = 34/357 (9%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKN--PNDKKEAEARFKQISEAYEVLS 58
           MG DYY IL +   A ED++KK+YRK+A+K+HPDKN  PN    AE +FK+I+EAY+VLS
Sbjct: 1   MGKDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPN----AEEKFKEIAEAYDVLS 56

Query: 59  DPQKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFG-SSPFG 117
           DP+KR++YDQYGEEGLK    SS       + +          +    FA FFG S+PF 
Sbjct: 57  DPKKRSLYDQYGEEGLKTGGGSSGGSGGSFHYTFHG-------DPHATFASFFGGSNPFD 109

Query: 118 FGSAGPGKSTR----------FQSEGGGTFGGFG-MGENIF----RTYSDGSVPRKP--- 159
              A   +STR             E    FG FG  G N      R   +   PR+    
Sbjct: 110 IFFAS-SRSTRPFSGFDPDDMDVDEDEDPFGAFGRFGFNGLSRGPRRAPEPLYPRRKVQD 168

Query: 160 PPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQT-PESEILTIDVKPGWKKGTKITFP 218
           PPV  +L  SLEE+Y GST++MKI+R  ++ +GR    E +IL I +K GWK+GTKITFP
Sbjct: 169 PPVVHELRVSLEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRGWKEGTKITFP 228

Query: 219 DKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDL 278
            +G+  P+ +PAD+VFV+ +KPH  ++RD  +++ +  +SL EAL G +V++ T+DGR +
Sbjct: 229 KEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGRVI 288

Query: 279 NIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL 335
            +   D+I PG    + GEG+P  + P  RGDL ++F+V+FP +LTP+ R  LK+ L
Sbjct: 289 PLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHL 345

Mus musculus (taxid: 10090)

>sp|O75953|DNJB5_HUMAN DnaJ homolog subfamily B member 5 OS=Homo sapiens GN=DNAJB5 PE=1 SV=1

 Score =  253 bits (645), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 153/357 (42%), Positives = 216/357 (60%), Gaps = 34/357 (9%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKN--PNDKKEAEARFKQISEAYEVLS 58
           MG DYY IL +   A ED++KK+YRK+A+K+HPDKN  PN    AE +FK+I+EAY+VLS
Sbjct: 1   MGKDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPN----AEEKFKEIAEAYDVLS 56

Query: 59  DPQKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFG-SSPFG 117
           DP+KR +YDQYGEEGLK    +S       + +          +    FA FFG S+PF 
Sbjct: 57  DPKKRGLYDQYGEEGLKTGGGTSGGSSGSFHYTFHG-------DPHATFASFFGGSNPFD 109

Query: 118 FGSAGPGKSTR----------FQSEGGGTFGGFG-MGENIF----RTYSDGSVPRKP--- 159
              A   +STR             E    FG FG  G N      R   +   PR+    
Sbjct: 110 IFFAS-SRSTRPFSGFDPDDMDVDEDEDPFGAFGRFGFNGLSRGPRRAPEPLYPRRKVQD 168

Query: 160 PPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQT-PESEILTIDVKPGWKKGTKITFP 218
           PPV  +L  SLEE+Y GST++MKI+R  ++ +GR    E +IL I +K GWK+GTKITFP
Sbjct: 169 PPVVHELRVSLEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRGWKEGTKITFP 228

Query: 219 DKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDL 278
            +G+  P+ +PAD+VFV+ +KPH  ++RD  +++ +  +SL EAL G +V++ T+DGR +
Sbjct: 229 KEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGRVI 288

Query: 279 NIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL 335
            +   D+I PG    + GEG+P  + P  RGDL ++F+V+FP +LTP+ R  LK+ L
Sbjct: 289 PLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHL 345

Homo sapiens (taxid: 9606)

>sp|Q5BIP8|DNJB5_BOVIN DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2 SV=1

 Score =  251 bits (642), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 152/356 (42%), Positives = 214/356 (60%), Gaps = 32/356 (8%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKN--PNDKKEAEARFKQISEAYEVLS 58
           MG DYY IL +   A ED++KK+YRK+A+K+HPDKN  PN    AE +FK+I+EAY+VLS
Sbjct: 1   MGKDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPN----AEEKFKEIAEAYDVLS 56

Query: 59  DPQKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFG-SSPFG 117
           DP+KR +YDQYGEEGLK    SS       + +          +    FA FFG S+PF 
Sbjct: 57  DPKKRGLYDQYGEEGLKTGGGSSGGSSGSFHYTFHG-------DPHATFASFFGGSNPFD 109

Query: 118 FGSAGPGKSTRFQ---------SEGGGTFGGFG-MGENIF----RTYSDGSVPRKP---P 160
              A    +  F           E    FG FG  G N      R   +   PR+    P
Sbjct: 110 IFFASSRSARPFSGFDPDDMDVDEDDDPFGAFGRFGFNGLSRGPRRAPEPLYPRRKVQDP 169

Query: 161 PVESKLPCSLEELYSGSTRKMKISRTVVDANGRQT-PESEILTIDVKPGWKKGTKITFPD 219
           PV  +L  SLEE+Y GST++MKI+R  ++ +GR    E +IL I +K GWK+GTKITFP 
Sbjct: 170 PVVHELRVSLEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRGWKEGTKITFPK 229

Query: 220 KGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLN 279
           +G+  P+ +PAD+VFV+ +KPH  ++RD  +++ +  +SL EAL G +V++ T+DGR + 
Sbjct: 230 EGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGRVIP 289

Query: 280 IAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL 335
           +   D+I PG    + GEG+P  + P  RGDL ++F+V+FP +LTP+ R  LK+ L
Sbjct: 290 LPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHL 345

Bos taurus (taxid: 9913)

>sp|Q9QYJ3|DNJB1_MOUSE DnaJ homolog subfamily B member 1 OS=Mus musculus GN=Dnajb1 PE=2 SV=3

 Score =  250 bits (639), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 149/345 (43%), Positives = 216/345 (62%), Gaps = 17/345 (4%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
           MG DYY  L + + A++D++K++YR+ A+++HPDKN   +  AE +FK+I+EAY+VLSDP
Sbjct: 1   MGKDYYQTLGLARGASDDEIKRAYRRQALRYHPDKN--KEPGAEEKFKEIAEAYDVLSDP 58

Query: 61  QKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFG-SSPFGF- 118
           +KR I+D+YGEEGLK   PS  S       S   +   +P     +FAEFFG  +PF   
Sbjct: 59  RKREIFDRYGEEGLKGGSPSGGSSGGANGTSFSYTFHGDPHA---MFAEFFGGRNPFDTF 115

Query: 119 -----GSAGPGKSTRFQS--EGGGTFGGFGMGENIFRTYSDGSVPRKPPPVESKLPCSLE 171
                G  G      F S   G G F     G +  R   + +  ++ PPV   L  SLE
Sbjct: 116 FGQRNGEEGMDIDDTFSSFPMGMGGFTNMNFGRS--RPSQEPTRKKQDPPVTHDLRVSLE 173

Query: 172 ELYSGSTRKMKISRTVVDANGRQTP-ESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPA 230
           E+YSG T+KMKIS   ++ +G+    E +ILTI+VK GWK+GTKITFP +G++  N +PA
Sbjct: 174 EIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQTSNNIPA 233

Query: 231 DLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGF 290
           D+VFV+ +KPH+++KRD +D+I   ++SL EAL G +V++ TLDGR + +   D+I PG 
Sbjct: 234 DIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGM 293

Query: 291 ELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL 335
              +PGEG+P+ + P  RGDL I+FEV FP ++    R  L++ L
Sbjct: 294 RRKVPGEGLPLPKTPEKRGDLVIEFEVIFPERIPVSSRTILEQVL 338

Interacts with HSP70 and can stimulate its ATPase activity. Stimulates the association between HSC70 and HIP.

Mus musculus (taxid: 10090)

>sp|P25685|DNJB1_HUMAN DnaJ homolog subfamily B member 1 OS=Homo sapiens GN=DNAJB1 PE=1 SV=4

 Score =  250 bits (638), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 152/350 (43%), Positives = 220/350 (62%), Gaps = 27/350 (7%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
           MG DYY  L + + A+++++K++YR+ A+++HPDKN   +  AE +FK+I+EAY+VLSDP
Sbjct: 1   MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKN--KEPGAEEKFKEIAEAYDVLSDP 58

Query: 61  QKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFG-SSPFG-- 117
           +KR I+D+YGEEGLK   PS  SG      S   +   +P     +FAEFFG  +PF   
Sbjct: 59  RKREIFDRYGEEGLKGSGPSGGSGGGANGTSFSYTFHGDPHA---MFAEFFGGRNPFDTF 115

Query: 118 FGSAGPGKSTRFQSEGGGT---FGGFGMGENIF--------RTYSDGSVPRKPPPVESKL 166
           FG        R   EG      F GF MG   F        R+  + +  ++ PPV   L
Sbjct: 116 FGQ-------RNGEEGMDIDDPFSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDL 168

Query: 167 PCSLEELYSGSTRKMKISRTVVDANGRQTP-ESEILTIDVKPGWKKGTKITFPDKGNEQP 225
             SLEE+YSG T+KMKIS   ++ +G+    E +ILTI+VK GWK+GTKITFP +G++  
Sbjct: 169 RVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTS 228

Query: 226 NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDI 285
           N +PAD+VFV+ +KPH+++KRD +D+I   ++SL EAL G +V++ TLDGR + +   D+
Sbjct: 229 NNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDV 288

Query: 286 ISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL 335
           I PG    +PGEG+P+ + P  RGDL I+FEV FP ++    R  L++ L
Sbjct: 289 IRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL 338

Interacts with HSP70 and can stimulate its ATPase activity. Stimulates the association between HSC70 and HIP.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	337
449437112	335	PREDICTED: dnaJ homolog subfamily B memb	0.994	1.0	0.827	1e-155
449533932	308	PREDICTED: dnaJ homolog subfamily B memb	0.913	1.0	0.819	1e-139
225430093	339	PREDICTED: dnaJ homolog subfamily B memb	0.994	0.988	0.759	1e-139
297812767	347	predicted protein [Arabidopsis lyrata su	0.979	0.951	0.718	1e-138
15239455	347	putative DNAJ heat shock protein [Arabid	0.982	0.953	0.719	1e-138
356518270	311	PREDICTED: dnaJ homolog subfamily B memb	0.919	0.996	0.711	1e-135
357466371	327	DnaJ homolog subfamily B member [Medicag	0.967	0.996	0.721	1e-132
148906823	336	unknown [Picea sitchensis]	0.979	0.982	0.673	1e-125
302775710	311	hypothetical protein SELMODRAFT_231730 [	0.905	0.980	0.671	1e-124
242080673	343	hypothetical protein SORBIDRAFT_07g00416	0.982	0.965	0.691	1e-121

>gi|449437112|ref|XP_004136336.1| PREDICTED: dnaJ homolog subfamily B member 5-like [Cucumis sativus]

 Score =  553 bits (1424), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 279/337 (82%), Positives = 307/337 (91%), Gaps = 2/337 (0%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
           MG+DYYNILKVN+NA +DDLKK+YRKLAMKWHPDKNPN+KKEAE +FKQISEAYEVLSDP
Sbjct: 1   MGVDYYNILKVNRNANDDDLKKAYRKLAMKWHPDKNPNNKKEAETKFKQISEAYEVLSDP 60

Query: 61  QKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGS 120
           QK+AIYDQYGEEGLKDMPP  S G+ + NG GG S GFNPRNAEDIFAEFFGSSPFGFGS
Sbjct: 61  QKKAIYDQYGEEGLKDMPPPGSGGFPFGNGGGGGSSGFNPRNAEDIFAEFFGSSPFGFGS 120

Query: 121 AGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPPVESKLPCSLEELYSGSTRK 180
           +GPGKS R+QSEG   FGGFG  ENIFRTYS+   P+KP PVESKLPC+LEELYSGSTRK
Sbjct: 121 SGPGKSMRYQSEG--IFGGFGGSENIFRTYSENVTPKKPAPVESKLPCTLEELYSGSTRK 178

Query: 181 MKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKP 240
           MKISRTVVDANGRQ PE+EILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKP
Sbjct: 179 MKISRTVVDANGRQVPETEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKP 238

Query: 241 HDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMP 300
           HDV+KRD ND+I+NH+V+LAEALGGT+++L TLDGR L+I V DI+SPG+EL I  EGMP
Sbjct: 239 HDVFKRDGNDIIMNHRVTLAEALGGTTINLTTLDGRSLSIPVIDIVSPGYELVIAREGMP 298

Query: 301 IAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALGG 337
           I REPGNRGDLRIKF+VKFPT+LTPEQRAGLKRALGG
Sbjct: 299 IVREPGNRGDLRIKFDVKFPTRLTPEQRAGLKRALGG 335

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449533932|ref|XP_004173924.1| PREDICTED: dnaJ homolog subfamily B member 4-like, partial [Cucumis sativus]

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 254/310 (81%), Positives = 280/310 (90%), Gaps = 2/310 (0%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
           MG+DYYNILKVN+NA +DDLKK+YRKLAMKWHPDKNPN+KKEAE +FKQISEAYEVLSDP
Sbjct: 1   MGVDYYNILKVNRNANDDDLKKAYRKLAMKWHPDKNPNNKKEAETKFKQISEAYEVLSDP 60

Query: 61  QKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGS 120
           QK+AIYDQYGEEGLKDMPP  S G+ + NG GG S GFNPRNAEDIFAEFFGSSPFGFGS
Sbjct: 61  QKKAIYDQYGEEGLKDMPPPGSGGFPFGNGGGGGSSGFNPRNAEDIFAEFFGSSPFGFGS 120

Query: 121 AGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPPVESKLPCSLEELYSGSTRK 180
           +GPGKS R+QSEG   FGGFG  ENIFRTYS+   P+KP PVESKLPC+LEELYSGSTRK
Sbjct: 121 SGPGKSMRYQSEG--IFGGFGGSENIFRTYSENVTPKKPAPVESKLPCTLEELYSGSTRK 178

Query: 181 MKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKP 240
           MKISRTVVDANGRQ PE+EILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKP
Sbjct: 179 MKISRTVVDANGRQVPETEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKP 238

Query: 241 HDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMP 300
           HDV+KRD ND+I+NH+V+LAEALGGT+++L TLDGR L+I V DI+SPG+EL I  EGMP
Sbjct: 239 HDVFKRDGNDIIMNHRVTLAEALGGTTINLTTLDGRSLSIPVIDIVSPGYELVIAREGMP 298

Query: 301 IAREPGNRGD 310
           I REPGNRGD
Sbjct: 299 IVREPGNRGD 308

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430093|ref|XP_002284572.1| PREDICTED: dnaJ homolog subfamily B member 13 isoform 1 [Vitis vinifera] gi|296081929|emb|CBI20934.3| unnamed protein product [Vitis vinifera]

 Score =  501 bits (1291), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 259/341 (75%), Positives = 296/341 (86%), Gaps = 6/341 (1%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
           MG+DYYN+LKV KNAT++DLKKSYR+LAMKWHPDKNPN+KKEAEA+FKQISEAYEVLSDP
Sbjct: 1   MGVDYYNVLKVGKNATDEDLKKSYRRLAMKWHPDKNPNNKKEAEAKFKQISEAYEVLSDP 60

Query: 61  QKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGS 120
           QK+ +YDQ+GEEGLKDMPP  S G         N  GF PRNAEDIFAEFFGS+PFGFGS
Sbjct: 61  QKKVVYDQHGEEGLKDMPPPGSGGGFPFGSGDAN--GFFPRNAEDIFAEFFGSNPFGFGS 118

Query: 121 AGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGS----VPRKPPPVESKLPCSLEELYSG 176
           A  G+S RFQSEGGGTFGGFG GE+ FR+Y++G+      RKPPPVE+KLPC+L ELY+G
Sbjct: 119 AAHGRSMRFQSEGGGTFGGFGGGESAFRSYTEGTGGSVRLRKPPPVENKLPCTLAELYTG 178

Query: 177 STRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVI 236
           STRKMKISRTVVDANGR  PE+EIL I+VKPGWKKGTK+TF DKGNEQ NQL ADLVFVI
Sbjct: 179 STRKMKISRTVVDANGRLVPETEILIIEVKPGWKKGTKVTFQDKGNEQLNQLAADLVFVI 238

Query: 237 DEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPG 296
           DEKP +V+KRD NDL++N+KVSLAEAL GT+V+L TLDGR+L I VTDI+SPG+EL +  
Sbjct: 239 DEKPDNVFKRDGNDLVMNYKVSLAEALAGTAVTLTTLDGRNLTIPVTDIVSPGYELVVAK 298

Query: 297 EGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALGG 337
           EGMPI +EPGNRGDLRIKFEVKFPT+LTPEQRAGL+RALGG
Sbjct: 299 EGMPIVKEPGNRGDLRIKFEVKFPTRLTPEQRAGLRRALGG 339

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297812767|ref|XP_002874267.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297320104|gb|EFH50526.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 253/352 (71%), Positives = 293/352 (83%), Gaps = 22/352 (6%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYE----- 55
           MG+DYYNILKVN+NATEDDLKKSYR+LAMKWHPDKNPN K EAEA+FKQISEAYE     
Sbjct: 1   MGLDYYNILKVNRNATEDDLKKSYRRLAMKWHPDKNPNTKTEAEAKFKQISEAYEASLSI 60

Query: 56  ---VLSDPQKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFG 112
              VLSDPQKRA+YDQYGEEGL DMPP  S G      + G + GFNPRNAEDIFAEFFG
Sbjct: 61  FLFVLSDPQKRAVYDQYGEEGLSDMPPPGSMG------NNGRAGGFNPRNAEDIFAEFFG 114

Query: 113 SSPFGFGSAG-PGKSTRFQSEGGGTFGGFGMG------ENIFRTYSDGS-VPRKPPPVES 164
           SSPFGFGSAG PG+S RFQS+GGG   G   G       NIFRTYS+G+  P+KPPPVES
Sbjct: 115 SSPFGFGSAGGPGRSMRFQSDGGGGMFGGFGGGNNGSENNIFRTYSEGTPAPKKPPPVES 174

Query: 165 KLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQ 224
           KLPCSLEELYSGSTRKMKISR++VDANGRQ  E+EILTI VKPGWKKGTKI FPDKGNEQ
Sbjct: 175 KLPCSLEELYSGSTRKMKISRSIVDANGRQAQETEILTIVVKPGWKKGTKIKFPDKGNEQ 234

Query: 225 PNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTD 284
            NQLPADLVFVIDEKPHD++KRD NDLI + +V+LAEA+GGT+V++ TLDGR+L + +++
Sbjct: 235 VNQLPADLVFVIDEKPHDLFKRDGNDLITSQRVTLAEAIGGTTVNINTLDGRNLPVGISE 294

Query: 285 IISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336
           I+SPG+E  +PGEGMPIA+EP N+GDL+IKF+V+FP +LT EQ++ LKR L 
Sbjct: 295 IVSPGYEFVVPGEGMPIAKEPRNKGDLKIKFDVQFPARLTTEQKSALKRVLA 346

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15239455|ref|NP_197935.1| putative DNAJ heat shock protein [Arabidopsis thaliana] gi|332006076|gb|AED93459.1| putative DNAJ heat shock protein [Arabidopsis thaliana]

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 254/353 (71%), Positives = 293/353 (83%), Gaps = 22/353 (6%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYE----- 55
           MG+DYY+ILKVN+NATEDDLKKSYRKLAMKWHPDKNPN K EAEA+FKQISEAYE     
Sbjct: 1   MGLDYYDILKVNRNATEDDLKKSYRKLAMKWHPDKNPNTKTEAEAKFKQISEAYEAKYEV 60

Query: 56  ---VLSDPQKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFG 112
              VLSDPQKRA+YDQYGEEGL DMPP  S+G      + G + GFNPRNAEDIFAEFFG
Sbjct: 61  MFQVLSDPQKRAVYDQYGEEGLSDMPPPGSTG------NNGRAGGFNPRNAEDIFAEFFG 114

Query: 113 SSPFGFGSAG-PGKSTRFQSEGGGTFGGFGMG------ENIFRTYSDGS-VPRKPPPVES 164
           SSPFGFGSAG PG+S RFQS+GGG   G   G       NIFRTYS+G+  P+KPPPVES
Sbjct: 115 SSPFGFGSAGGPGRSMRFQSDGGGGMFGGFGGGNNGSENNIFRTYSEGTPAPKKPPPVES 174

Query: 165 KLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQ 224
           KLPCSLEELYSGSTRKMKISR++VDANGRQ  E+EILTI VKPGWKKGTKI FPDKGNEQ
Sbjct: 175 KLPCSLEELYSGSTRKMKISRSIVDANGRQAQETEILTIVVKPGWKKGTKIKFPDKGNEQ 234

Query: 225 PNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTD 284
            NQLPADLVFVIDEKPHD++ RD NDLI + +V+LAEA+GGT+V++ TLDGR+L + V +
Sbjct: 235 VNQLPADLVFVIDEKPHDLFTRDGNDLITSRRVTLAEAIGGTTVNINTLDGRNLPVGVAE 294

Query: 285 IISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALGG 337
           I+SPG+E  +PGEGMPIA+EP N+GDL+IKF+V+FP +LT EQ++ LKR L G
Sbjct: 295 IVSPGYEFVVPGEGMPIAKEPRNKGDLKIKFDVQFPARLTTEQKSALKRVLAG 347

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356518270|ref|XP_003527802.1| PREDICTED: dnaJ homolog subfamily B member 4-like [Glycine max]

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 239/336 (71%), Positives = 277/336 (82%), Gaps = 26/336 (7%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
           MG+DYYN+L VN+NATEDDLKK+YRKLAMKWHPDKNP +KKEAEA FK+ISEAYEVLSDP
Sbjct: 1   MGLDYYNVLNVNRNATEDDLKKAYRKLAMKWHPDKNPTNKKEAEANFKEISEAYEVLSDP 60

Query: 61  QKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGS 120
           QKR +YDQ GEEGLKD PP          G+   S GFNPRNAEDIFAEFFGSSPFGFGS
Sbjct: 61  QKRVVYDQDGEEGLKDRPPP---------GNESASSGFNPRNAEDIFAEFFGSSPFGFGS 111

Query: 121 AGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPPVESKLPCSLEELYSGSTRK 180
           +GPG+S RF S+GG                   ++P+KP PVE+KL CSL ELYSGSTRK
Sbjct: 112 SGPGRSKRFPSDGG-----------------RANMPKKPLPVETKLACSLAELYSGSTRK 154

Query: 181 MKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKP 240
           MKISR+VVD NG+  PE+EILTI+VKPGWKKGTKITFPDKGN+QPNQL ADLVFVIDEKP
Sbjct: 155 MKISRSVVDVNGQAIPETEILTIEVKPGWKKGTKITFPDKGNQQPNQLAADLVFVIDEKP 214

Query: 241 HDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMP 300
           HD++ RD NDLIV+ +VSLAEA+GGT+++L TLDGR L+I V+DI+SPG+E+ +  EGMP
Sbjct: 215 HDLFDRDGNDLIVSKRVSLAEAIGGTTINLTTLDGRSLSIPVSDIVSPGYEMIVANEGMP 274

Query: 301 IAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336
           I +EPG+RGDLRIKF+VKFPT+LT EQRAGLKRALG
Sbjct: 275 ITKEPGHRGDLRIKFDVKFPTRLTHEQRAGLKRALG 310

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357466371|ref|XP_003603470.1| DnaJ homolog subfamily B member [Medicago truncatula] gi|355492518|gb|AES73721.1| DnaJ homolog subfamily B member [Medicago truncatula]

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 244/338 (72%), Positives = 283/338 (83%), Gaps = 12/338 (3%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
           MG+DYYNILKV+KNATEDDLKK+YRKLAMKWHPDKNPN+KKEAEARFKQISEAY VLSDP
Sbjct: 1   MGVDYYNILKVDKNATEDDLKKAYRKLAMKWHPDKNPNNKKEAEARFKQISEAYAVLSDP 60

Query: 61  QKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGS 120
           Q+R +YDQ GE+GLK+ P   +   S          GF PR+AEDIFAEFFGSSP  FGS
Sbjct: 61  QRRNVYDQLGEQGLKERPSPETESPS----------GFYPRSAEDIFAEFFGSSPLNFGS 110

Query: 121 AGPGKSTRFQSEGGGTFGGFGMGENIFRTYSD-GSVPRKPPPVESKLPCSLEELYSGSTR 179
           +GPG+S RF S+GG   GGF    N  RT+S+  ++P+KPPPVE+KLPCSLEELYSGSTR
Sbjct: 111 SGPGRSKRFPSDGGAGNGGFSGDLN-SRTHSERANMPKKPPPVETKLPCSLEELYSGSTR 169

Query: 180 KMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEK 239
           KMKISRTVVDA GR+  E+EIL+I+VKPGWKKGTKITFPDKGN+  NQLPADLVFVIDEK
Sbjct: 170 KMKISRTVVDAYGREIKETEILSIEVKPGWKKGTKITFPDKGNQLINQLPADLVFVIDEK 229

Query: 240 PHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGM 299
           PH+++KRD NDLIVN K+SLAEA+GGTSV++ TL  R L++ V +I+SPG+EL +  EGM
Sbjct: 230 PHELFKRDGNDLIVNQKISLAEAIGGTSVNIKTLYKRSLSVPVKNIVSPGYELVVANEGM 289

Query: 300 PIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALGG 337
           PI +EPG+RGDLRI FEVKFPTKLTPEQRA LKRALGG
Sbjct: 290 PITKEPGHRGDLRIIFEVKFPTKLTPEQRAALKRALGG 327

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|148906823|gb|ABR16557.1| unknown [Picea sitchensis]

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 231/343 (67%), Positives = 279/343 (81%), Gaps = 13/343 (3%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
           MG+DYYN+L V +NATEDDLKK+YRKLAMKWHPDKNPN+KKEAEA+FKQISEAYEVLSD 
Sbjct: 1   MGVDYYNVLNVGRNATEDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYEVLSDN 60

Query: 61  QKRAIYDQYGEEGLK-DMPPSSSSGYS-YANGSGG-NSKGFNPRNAEDIFAEFFGSS-PF 116
           QKR IYDQYGEEGLK  +PP ++ G S ++NG GG N   FNPRNAED+FAEFFGSS PF
Sbjct: 61  QKRQIYDQYGEEGLKGQVPPPAAGGSSPFSNGGGGPNIFTFNPRNAEDVFAEFFGSSSPF 120

Query: 117 GFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSV--PRKPPPVESKLPCSLEELY 174
           G  ++   +++RFQ    G  GG  M    FR++S+ +   PRK  PVE+KLPCSLEELY
Sbjct: 121 GGFTSMGSRNSRFQE---GMMGGTEM----FRSFSEAAPAGPRKAAPVENKLPCSLEELY 173

Query: 175 SGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVF 234
           +GSTRKMKISR +VDA+G+     EILTI+VKPGWKKGTKITFP+KGN+QPN +PADLVF
Sbjct: 174 NGSTRKMKISRNIVDASGKSMSVEEILTIEVKPGWKKGTKITFPEKGNQQPNVVPADLVF 233

Query: 235 VIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGI 294
           VIDEKPH+VYKRD NDL+V  K+SL EAL G  V+L TLDGR+L+I +TDI++PG E  +
Sbjct: 234 VIDEKPHNVYKRDGNDLVVTQKISLVEALTGGMVNLTTLDGRNLSIPITDIVNPGTEKVV 293

Query: 295 PGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALGG 337
           P EGMPI +E G +G+LR+KF++KFPT+LT EQ+AGLKR LGG
Sbjct: 294 PNEGMPIGKEHGRKGNLRVKFDIKFPTRLTAEQKAGLKRLLGG 336

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302775710|ref|XP_002971272.1| hypothetical protein SELMODRAFT_231730 [Selaginella moellendorffii] gi|300161254|gb|EFJ27870.1| hypothetical protein SELMODRAFT_231730 [Selaginella moellendorffii]

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 227/338 (67%), Positives = 265/338 (78%), Gaps = 33/338 (9%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
           MG+DYY++LKV+KNATEDDLKK+YRKLAMKWHPDKNPN+KKEAEA+FKQISEAYEVLSDP
Sbjct: 1   MGIDYYSVLKVDKNATEDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYEVLSDP 60

Query: 61  QKRAIYDQYGEEGLKDM--PPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFG-SSPFG 117
           QKR IYDQYGEEGLK    PP ++ G ++ANG+G N   FNPRNAEDIFAEFFG SSPFG
Sbjct: 61  QKRTIYDQYGEEGLKGQVPPPGATGGTNFANGAGPNVFVFNPRNAEDIFAEFFGGSSPFG 120

Query: 118 FGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPPVESKLPCSLEELYSGS 177
            G                   GFG            S  RK P VE+KLPCSLEELY+GS
Sbjct: 121 MG-------------------GFGR-----------SASRKAPAVENKLPCSLEELYTGS 150

Query: 178 TRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVID 237
           TRKMKISR + D +G+  P  E LTIDVKPGWKKGTKITFP+KGNEQPN +PAD+VFVID
Sbjct: 151 TRKMKISRNIADPSGKTMPVEEFLTIDVKPGWKKGTKITFPEKGNEQPNLIPADIVFVID 210

Query: 238 EKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGE 297
           EKPHDV+KRD NDL++  KVSLA+AL GT++++ TLDGR L I + DIISPG+E  +P E
Sbjct: 211 EKPHDVFKRDGNDLVMTQKVSLADALTGTTITVNTLDGRTLTIPINDIISPGYEKIVPRE 270

Query: 298 GMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL 335
           GMPIA+EPG +GDL+IKF+VKFPT+LTPEQ+A +KR L
Sbjct: 271 GMPIAKEPGRKGDLKIKFDVKFPTRLTPEQKAAVKRYL 308

Source: Selaginella moellendorffii

Species: Selaginella moellendorffii

Genus: Selaginella

Family: Selaginellaceae

Order: Selaginellales

Class: Isoetopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242080673|ref|XP_002445105.1| hypothetical protein SORBIDRAFT_07g004160 [Sorghum bicolor] gi|241941455|gb|EES14600.1| hypothetical protein SORBIDRAFT_07g004160 [Sorghum bicolor]

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 238/344 (69%), Positives = 279/344 (81%), Gaps = 13/344 (3%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPND-KKEAEARFKQISEAYEVLSD 59
           MG DYYN+LKVN+NATE+DLKKSYR+LAMKWHPDKNP D KKEAEA+FK+ISEAYEVLSD
Sbjct: 1   MGTDYYNVLKVNRNATEEDLKKSYRRLAMKWHPDKNPGDVKKEAEAKFKKISEAYEVLSD 60

Query: 60  PQKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFG 119
           PQKRAIYDQYGEEGLK     ++ G    + +G   + FNPRNAED+FAEFFGSS   F 
Sbjct: 61  PQKRAIYDQYGEEGLK-----AADGGGSTSMNGAAKQRFNPRNAEDVFAEFFGSSK-PFE 114

Query: 120 SAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSV------PRKPPPVESKLPCSLEEL 173
           + G  KS RFQ+EG GTFGGFG  EN FR+Y+D SV       RKPPPVE+KLPCSLEEL
Sbjct: 115 NMGRAKSMRFQTEGAGTFGGFGGNENKFRSYNDSSVGTSSSQARKPPPVETKLPCSLEEL 174

Query: 174 YSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLV 233
           Y+GSTRKMKISR VV  NG+   ESEILTID+KPGWKKGTKITFPDKGNEQPNQLPADLV
Sbjct: 175 YAGSTRKMKISRNVVKPNGQLGTESEILTIDIKPGWKKGTKITFPDKGNEQPNQLPADLV 234

Query: 234 FVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELG 293
           FVIDEKPHD+Y R+SNDL+V+ K+ L +AL GT+V+L TLDGRDL I +TD+++PG+EL 
Sbjct: 235 FVIDEKPHDLYTRESNDLLVHRKIDLVDALAGTTVNLKTLDGRDLVIKLTDVVTPGYELV 294

Query: 294 IPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALGG 337
           I  EGMPI +E G RG+LRIKF+V FP +L+ EQR  +++ LG 
Sbjct: 295 IAKEGMPIVKENGRRGNLRIKFDVNFPKRLSSEQRHSIRKVLGA 338

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	337
TAIR|locus:2179429	347	AT5G25530 [Arabidopsis thalian	0.982	0.953	0.645	1.5e-115
TAIR|locus:2054809	337	AT2G20560 [Arabidopsis thalian	0.982	0.982	0.549	2.6e-95
TAIR|locus:2121368	348	AT4G28480 [Arabidopsis thalian	0.997	0.965	0.520	4.3e-93
TAIR|locus:2179127	335	AT5G01390 [Arabidopsis thalian	0.985	0.991	0.523	1.1e-92
TAIR|locus:2825170	331	AT1G59725 [Arabidopsis thalian	0.964	0.981	0.561	8.1e-92
TAIR|locus:2012743	349	AT1G10350 [Arabidopsis thalian	0.991	0.957	0.527	1.7e-91
TAIR|locus:2097638	323	AT3G08910 [Arabidopsis thalian	0.943	0.984	0.531	1.7e-91
TAIR|locus:2097880	350	AT3G47940 [Arabidopsis thalian	0.682	0.657	0.493	1.2e-89
UNIPROTKB|F1NKV0	342	DNAJB4 "Uncharacterized protei	0.531	0.523	0.455	5.3e-69
ZFIN|ZDB-GENE-040801-192	340	dnajb4 "DnaJ (Hsp40) homolog,	0.557	0.552	0.450	8.7e-69

TAIR|locus:2179429 AT5G25530 [Arabidopsis thaliana (taxid:3702)]

 Score = 1139 (406.0 bits), Expect = 1.5e-115, P = 1.5e-115
 Identities = 228/353 (64%), Positives = 264/353 (74%)

Query:     1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYE----- 55
             MG+DYY+ILKVN+NATEDDLKKSYRKLAMKWHPDKNPN K EAEA+FKQISEAYE     
Sbjct:     1 MGLDYYDILKVNRNATEDDLKKSYRKLAMKWHPDKNPNTKTEAEAKFKQISEAYEAKYEV 60

Query:    56 ---VLSDPQKRAIYDQYGEEGLKDMPPXXXXXXXXXXXXXXXXKGFNPRNAEDIXXXXXX 112
                VLSDPQKRA+YDQYGEEGL DMPP                 GFNPRNAEDI      
Sbjct:    61 MFQVLSDPQKRAVYDQYGEEGLSDMPPPGSTGNNGRAG------GFNPRNAEDIFAEFFG 114

Query:   113 XXXXXXXXXXX-XKSTRFQSEXXXXXXXXX------XXENIFRTYSDGS-VPRKPPPVES 164
                          +S RFQS+                  NIFRTYS+G+  P+KPPPVES
Sbjct:   115 SSPFGFGSAGGPGRSMRFQSDGGGGMFGGFGGGNNGSENNIFRTYSEGTPAPKKPPPVES 174

Query:   165 KLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQ 224
             KLPCSLEELYSGSTRKMKISR++VDANGRQ  E+EILTI VKPGWKKGTKI FPDKGNEQ
Sbjct:   175 KLPCSLEELYSGSTRKMKISRSIVDANGRQAQETEILTIVVKPGWKKGTKIKFPDKGNEQ 234

Query:   225 PNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTD 284
              NQLPADLVFVIDEKPHD++ RD NDLI + +V+LAEA+GGT+V++ TLDGR+L + V +
Sbjct:   235 VNQLPADLVFVIDEKPHDLFTRDGNDLITSRRVTLAEAIGGTTVNINTLDGRNLPVGVAE 294

Query:   285 IISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALGG 337
             I+SPG+E  +PGEGMPIA+EP N+GDL+IKF+V+FP +LT EQ++ LKR L G
Sbjct:   295 IVSPGYEFVVPGEGMPIAKEPRNKGDLKIKFDVQFPARLTTEQKSALKRVLAG 347

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:2054809 AT2G20560 [Arabidopsis thaliana (taxid:3702)]

 Score = 948 (338.8 bits), Expect = 2.6e-95, P = 2.6e-95
 Identities = 188/342 (54%), Positives = 234/342 (68%)

Query:     1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
             MG+DYY +L+V+++A++DDLKK+YRKLAMKWHPDKNPN+KK+AEA FKQISEAYEVLSDP
Sbjct:     1 MGVDYYKVLQVDRSASDDDLKKAYRKLAMKWHPDKNPNNKKDAEAMFKQISEAYEVLSDP 60

Query:    61 QKRAIYDQYGEEGLKDM--PPXXXXXXXXXXXXXXXXKGFNPRNAEDIXXXXXXXXXXXX 118
             QK+A+YDQYGEEGLK    PP                  FNPRNA+DI            
Sbjct:    61 QKKAVYDQYGEEGLKGNVPPPDAGGATYFSTGDGPTSFRFNPRNADDIFAEFFGFSSPFG 120

Query:   119 XXXXXXKSTRFQSEXXXXXXXXXXXENIFRTYSDGSV----PRKPPPVESKLPCSLEELY 174
                     TRF S            E        GS+     RK  P+E+KLPCSLE+LY
Sbjct:   121 GGRG---GTRFSSSMFGDNMFASFGEG--GGGGGGSMHHGGARKAAPIENKLPCSLEDLY 175

Query:   175 SGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVF 234
              G+T+KM+ISR + D +G+     EILTIDVKPGWKKGTKITFP+KGNEQP  +PADLVF
Sbjct:   176 KGTTKKMRISREIADVSGKTMQVEEILTIDVKPGWKKGTKITFPEKGNEQPGVIPADLVF 235

Query:   235 VIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGI 294
             +IDEKPH V+ R+ NDLIV  K+SL EAL G +V+L TLDGR L I VT+++ P +E  +
Sbjct:   236 IIDEKPHPVFTREGNDLIVTQKISLVEALTGYTVNLTTLDGRRLTIPVTNVVHPEYEEVV 295

Query:   295 PGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336
             P EGMP+ ++   RG+LRIKF +KFPT+LT EQ+ G+K+ LG
Sbjct:   296 PKEGMPLQKDQTKRGNLRIKFNIKFPTRLTSEQKTGVKKLLG 337

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS;RCA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0009408 "response to heat" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

TAIR|locus:2121368 AT4G28480 [Arabidopsis thaliana (taxid:3702)]

 Score = 927 (331.4 bits), Expect = 4.3e-93, P = 4.3e-93
 Identities = 181/348 (52%), Positives = 232/348 (66%)

Query:     1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
             MG+DYY +L+V+++A +DDLKK+YRKLAMKWHPDKNPN+KK+AEA+FKQISEAY+VLSDP
Sbjct:     1 MGVDYYKVLQVDRSANDDDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60

Query:    61 QKRAIYDQYGEEGLK-DMPPXXXXXXXXXXXXXXXXKG---FNPRNAEDIXXXXXXXXXX 116
             QKRA+YDQYGEEGLK ++PP                     FNPR+A+DI          
Sbjct:    61 QKRAVYDQYGEEGLKGNVPPPNAATSGASYFSTGDGSSSFRFNPRSADDIFAEFFGFSTP 120

Query:   117 XXXXXXXXKSTRFQSEXXXXXXXXXXXENI--------FRTYSDGSVPRKPPPVESKLPC 168
                        RF S            E             +   +  RK  P+E+KLPC
Sbjct:   121 FGGGGGGTGGQRFASRMFGDDMYASFGEGAGGGGAMHHHHHHHHHAAARKVAPIENKLPC 180

Query:   169 SLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQL 228
             SLE+LY G+T+KMKISR +VD +G+     EILTI VKPGWKKGTKITFP+KGNE P  +
Sbjct:   181 SLEDLYKGTTKKMKISREIVDVSGKAMQVEEILTIGVKPGWKKGTKITFPEKGNEHPGVI 240

Query:   229 PADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISP 288
             PADLVF+IDEKPH V+ R+ NDLIV  KVSLA+AL G + ++ TLDGR L I +T++I P
Sbjct:   241 PADLVFIIDEKPHPVFTREGNDLIVTQKVSLADALTGYTANIATLDGRTLTIPITNVIHP 300

Query:   289 GFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336
              +E  +P EGMP+ ++   +G+LRIKF +KFP +LT EQ+AG K+ +G
Sbjct:   301 EYEEVVPKEGMPLQKDQTKKGNLRIKFNIKFPARLTAEQKAGFKKLIG 348

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:2179127 AT5G01390 [Arabidopsis thaliana (taxid:3702)]

 Score = 923 (330.0 bits), Expect = 1.1e-92, P = 1.1e-92
 Identities = 176/336 (52%), Positives = 231/336 (68%)

Query:     1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
             MG+D+Y +L+V+++A +D+LKK+YRKLAMKWHPDKNPN+KKEAEA+FKQISEAY+VLSDP
Sbjct:     1 MGVDFYKVLEVDRSANDDELKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDP 60

Query:    61 QKRAIYDQYGEEGLKDMPPXXXXXXXXXXXXXXXXKGFNPRNAEDIXXXXXXXXXXXXXX 120
             QKRAIY+QYGEEGL   PP                  FNPR+A+DI              
Sbjct:    61 QKRAIYEQYGEEGLNQAPPPGAGGGYPGGSDAGASFRFNPRSADDIFSEFFGFTRPSFGT 120

Query:   121 XXXXKSTRFQSEXXXXXXXXXXXENIFRTYSDGSVP-RKPPPVESKLPCSLEELYSGSTR 179
                   +R                    T  + S+P RK  P+E +LPCSLE+LY G ++
Sbjct:   121 GS---DSRAGPSGFRYGDDIFASFRAATTGGEASIPSRKSAPIERQLPCSLEDLYKGVSK 177

Query:   180 KMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEK 239
             KMKISR V+D++GR TP  EILTI++KPGWKKGTKITF +KGNE    +P+DLVF++DEK
Sbjct:   178 KMKISRDVLDSSGRPTPVEEILTIEIKPGWKKGTKITFLEKGNEHRGVIPSDLVFIVDEK 237

Query:   240 PHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGM 299
             PH V+KRD NDL+V  K+SL +AL G +  + TLDGR L + V ++ISP +E  + GEGM
Sbjct:   238 PHPVFKRDGNDLVVMQKISLVDALTGYTAQVTTLDGRTLTVPVNNVISPSYEEVVKGEGM 297

Query:   300 PIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL 335
             PI ++P  +G+LRI+F +KFP+KLT EQ++G+KR L
Sbjct:   298 PIPKDPSRKGNLRIRFIIKFPSKLTTEQKSGIKRML 333

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:2825170 AT1G59725 [Arabidopsis thaliana (taxid:3702)]

 Score = 915 (327.2 bits), Expect = 8.1e-92, P = 8.1e-92
 Identities = 192/342 (56%), Positives = 224/342 (65%)

Query:     1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPND-KKEAEARFKQISEAYEVLSD 59
             MG+DYYN+L VN +ATEDDLKKSYR+LAMKWHPDKNP   K+EAEA+FKQISEAY+VLSD
Sbjct:     1 MGVDYYNVLNVNPSATEDDLKKSYRRLAMKWHPDKNPTSIKQEAEAKFKQISEAYDVLSD 60

Query:    60 PQKRAIYDQYGEEGLK--DMPPXXXXXXXXXXXXXXXXKGFN--PRNAEDIXXXXXXXXX 115
             P KR IYDQYGE+GL   +                    GF   PR+AEDI         
Sbjct:    61 PNKRQIYDQYGEDGLTATEATASSQQHNYSSGNNNNYNAGFRYYPRDAEDIFAEFFGASE 120

Query:   116 XXXXXXXXXKSTRFQSEXXXXXXXXXXXENIFRTYSDGSVPRKPPPVESKLPCSLEELYS 175
                         RF+S                +T     V RK P +ESKL C+LEELY 
Sbjct:   121 KVFDGGVGGGG-RFKSAEAGS-----------QTNRKTPVNRKAPAIESKLACTLEELYK 168

Query:   176 GSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFV 235
             G  RKMKISR V D  G+  P  EIL ID+ PGWKKGTKITFP+KGN++P   PADL+FV
Sbjct:   169 GGRRKMKISRVVPDGLGKSKPVEEILKIDITPGWKKGTKITFPEKGNQEPGVTPADLIFV 228

Query:   236 IDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIP 295
             IDEKPH VYKRD NDLIV+ KVSL EAL G ++SL TLDGR+L I V DI+ PG E+ IP
Sbjct:   229 IDEKPHSVYKRDGNDLIVDKKVSLLEALTGITLSLTTLDGRNLTIPVLDIVKPGQEIVIP 288

Query:   296 GEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALGG 337
              EGMPI++E   RGDLRI FE+ FP++LT EQ+  LKR LGG
Sbjct:   289 SEGMPISKEGSKRGDLRINFEICFPSRLTSEQKTDLKRVLGG 330

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:2012743 AT1G10350 [Arabidopsis thaliana (taxid:3702)]

 Score = 912 (326.1 bits), Expect = 1.7e-91, P = 1.7e-91
 Identities = 185/351 (52%), Positives = 228/351 (64%)

Query:     1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
             MG+DYYN+LKVN+NA EDDLKKSYR++AMKWHPDKNP  KKEAEA+FKQISEAY+VLSDP
Sbjct:     1 MGVDYYNVLKVNRNANEDDLKKSYRRMAMKWHPDKNPTSKKEAEAKFKQISEAYDVLSDP 60

Query:    61 QKRAIYDQYGEEGLK--DMPPXXXXXXXXXXXXXXXXKG---FNPRNAEDIXXXXXXXXX 115
             Q+R IYDQYGEEGLK  D+P                      + PR+AEDI         
Sbjct:    61 QRRQIYDQYGEEGLKSTDLPTAAETAAHQQQRSYSSSNSEFRYYPRDAEDIFAEFFGESG 120

Query:   116 XXXXXXXXXKST---------RFQSEXXXXXXXXXXXENIFRTYSDGSVPRKPPPVESKL 166
                      ++          RF+S                +T    +  RK P +ESKL
Sbjct:   121 DAFGGGSSGRTRGDGGDGGGRRFKSAEAGSQANRKTPPTNKKTTPPAN--RKAPAIESKL 178

Query:   167 PCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN 226
              C+LEELY G+ +KM+ISR V D  G+     EIL ID+KPGWKKGTKITFP+KGN++P 
Sbjct:   179 ACTLEELYKGAKKKMRISRVVPDDFGKPKTVQEILKIDIKPGWKKGTKITFPEKGNQEPG 238

Query:   227 QLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDII 286
               PADL+FV+DEKPH V+KRD NDLI+  KVSL +AL G ++S+ TLDGR L I V DI+
Sbjct:   239 VTPADLIFVVDEKPHSVFKRDGNDLILEKKVSLIDALTGLTISVTTLDGRSLTIPVLDIV 298

Query:   287 SPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALGG 337
              PG E+ IP EGMP  ++P  RGDLR+ FE+ FP++LT EQ+  LKR LGG
Sbjct:   299 KPGQEIVIPNEGMP-TKDPLKRGDLRVTFEILFPSRLTSEQKNDLKRVLGG 348

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:2097638 AT3G08910 [Arabidopsis thaliana (taxid:3702)]

 Score = 912 (326.1 bits), Expect = 1.7e-91, P = 1.7e-91
 Identities = 177/333 (53%), Positives = 231/333 (69%)

Query:     1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
             MG+DYY +L+V++NA +DDLKK+YRKLAMKWHPDKNPN+KK+AEA+FKQISEAY+VLSDP
Sbjct:     1 MGVDYYKVLQVDRNAKDDDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDP 60

Query:    61 QKRAIYDQYGEEGLKDMPPXXXXXXXXXXXXXXXXKGFNPRNAEDIXXXXXXXXXXXXXX 120
             QKRAIYDQYGEEGL    P                  FN R+A+DI              
Sbjct:    61 QKRAIYDQYGEEGLTSQAPPPGAGGGFSDGGASFR--FNGRSADDIFSEFFGFTRPFGDS 118

Query:   121 XXXXKSTRFQSEXXXXXXXXXXXENIFRTYSDGSVPRKPPPVESKLPCSLEELYSGSTRK 180
                  S  F+             E++F   S+   PRK  P+E +LPCSLE+LY G ++K
Sbjct:   119 RGAGPSNGFR-----------FAEDVFS--SNVVPPRKAAPIERQLPCSLEDLYKGVSKK 165

Query:   181 MKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKP 240
             MKISR V+D++GR T   EILTI++KPGWKKGTKITFP+KGNEQ   +P+DLVF++DEKP
Sbjct:   166 MKISRDVLDSSGRPTTVEEILTIEIKPGWKKGTKITFPEKGNEQRGIIPSDLVFIVDEKP 225

Query:   241 HDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMP 300
             H V+KRD NDL++  K+ L EAL G +  + TLDGR + + + ++ISP +E  + GEGMP
Sbjct:   226 HAVFKRDGNDLVMTQKIPLVEALTGYTAQVSTLDGRSVTVPINNVISPSYEEVVKGEGMP 285

Query:   301 IAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKR 333
             I ++P  +G+LRIKF VKFP++LT EQ++G+KR
Sbjct:   286 IPKDPSKKGNLRIKFTVKFPSRLTTEQKSGIKR 318

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:2097880 AT3G47940 [Arabidopsis thaliana (taxid:3702)]

 Score = 591 (213.1 bits), Expect = 1.2e-89, Sum P(2) = 1.2e-89
 Identities = 119/241 (49%), Positives = 162/241 (67%)

Query:    98 FNPRNAEDIXXXXXXXXXXXXXXXXXXKSTR-FQSEXXXXXXXXXXXENIFRTYSDGSVP 156
             FNPR+AEDI                  +  R F++                  YS G + 
Sbjct:   118 FNPRDAEDIYAEFFGSENGGGSNNAGGRGNRAFRNGHFNTGGANG--------YS-GEM- 167

Query:   157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKIT 216
             RK P +E+ LP SLE+LY G  +KM+I+R V DA+GR   E+EIL I++KPGWKKGTK+T
Sbjct:   168 RKVPAMENPLPVSLEDLYKGVVKKMRITRNVYDASGRMMVEAEILPIEIKPGWKKGTKLT 227

Query:   217 FPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGR 276
             FP KGNE+P  +PAD+VFV++EKPH VYKRD NDL+V+ +++L EAL G +V+LITLDGR
Sbjct:   228 FPKKGNEEPGIIPADIVFVVEEKPHPVYKRDGNDLLVSQEITLLEALTGKTVNLITLDGR 287

Query:   277 DLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336
              L I +T+II P  E+ +P EGMPI++EPG +G+L++K  VK+P++LT +Q+  LKR LG
Sbjct:   288 TLMIPLTEIIKPDHEIVVPNEGMPISKEPGKKGNLKLKLSVKYPSRLTSDQKFELKRVLG 347

Query:   337 G 337
             G
Sbjct:   348 G 348

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

UNIPROTKB|F1NKV0 DNAJB4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 442 (160.7 bits), Expect = 5.3e-69, Sum P(2) = 5.3e-69
 Identities = 82/180 (45%), Positives = 126/180 (70%)

Query:   157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQT-PESEILTIDVKPGWKKGTKI 215
             ++ PPV  +L  SLEE+Y G T++M+ISR  ++ +GR    E +ILTI++K GWK+GTKI
Sbjct:   160 KQDPPVIHELKVSLEEIYHGCTKRMRISRKRLNPDGRSVRTEDKILTIEIKRGWKEGTKI 219

Query:   216 TFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDG 275
             TFP +G+E PN +PAD+VF+I +KPH  +KRD ++++   K+SL EAL G+S+++ T++G
Sbjct:   220 TFPKEGDETPNTIPADIVFIIKDKPHSHFKRDGSNIVYPVKISLREALCGSSINVPTIEG 279

Query:   276 RDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL 335
             R + + V +++ PG    I G G+P  + P  RGDL I+FEV FP  ++P  +  L+R L
Sbjct:   280 RTIPMTVNEVVKPGMRRRIIGYGLPFPKNPDQRGDLIIEFEVIFPDNISPASKEVLRRNL 339

GO:0006457 "protein folding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

ZFIN|ZDB-GENE-040801-192 dnajb4 "DnaJ (Hsp40) homolog, subfamily B, member 4" [Danio rerio (taxid:7955)]

 Score = 442 (160.7 bits), Expect = 8.7e-69, Sum P(2) = 8.7e-69
 Identities = 86/191 (45%), Positives = 128/191 (67%)

Query:   148 RTYSDGSVPRKP--PPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQT-PESEILTID 204
             R    G  PR+   P +  +L  SLEE++ GST++MKISR  ++ +GR    E +ILTI+
Sbjct:   147 RHVGQGGPPRRKQDPAIHHELRVSLEEVFHGSTKRMKISRKRLNPDGRTLRTEDKILTIE 206

Query:   205 VKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALG 264
             +K GWK+GTKITFP +G+E PN +PAD+VFVI +KPH  ++R+ +D++   +VSL ++L 
Sbjct:   207 IKRGWKEGTKITFPREGDETPNTIPADIVFVIKDKPHGHFRREGSDIVYPVRVSLRQSLC 266

Query:   265 GTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLT 324
             G SV++ T+DG+  N+ +TD+I PG    I G+G+P  + P  RGDL ++F+V FP  L 
Sbjct:   267 GCSVTVSTIDGKTCNMKITDVIKPGMRKVIAGQGLPFPKNPEQRGDLIVEFDVNFPESLP 326

Query:   325 PEQRAGLKRAL 335
                +  LKR L
Sbjct:   327 TNAKDVLKRHL 337

GO:0006457 "protein folding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A0K4S9	DNAJ_BURCH	No assigned EC number	0.3140	0.9287	0.8280	yes	no
Q1BYX2	DNAJ_BURCA	No assigned EC number	0.3140	0.9287	0.8280	yes	no
Q5R8J8	DNJB4_PONAB	No assigned EC number	0.4476	0.9643	0.9643	yes	no
B3R6G6	DNAJ_CUPTR	No assigned EC number	0.3166	0.9347	0.8355	yes	no
B1JW20	DNAJ_BURCC	No assigned EC number	0.3140	0.9287	0.8280	yes	no
A4JBS2	DNAJ_BURVG	No assigned EC number	0.3140	0.9287	0.8280	yes	no
Q9UDY4	DNJB4_HUMAN	No assigned EC number	0.4476	0.9643	0.9643	yes	no
Q46XI8	DNAJ_CUPPJ	No assigned EC number	0.3093	0.9347	0.8311	yes	no
Q0BI17	DNAJ_BURCM	No assigned EC number	0.3140	0.9287	0.8280	yes	no
Q9D832	DNJB4_MOUSE	No assigned EC number	0.4418	0.9643	0.9643	yes	no
A6UEY1	DNAJ_SINMW	No assigned EC number	0.3125	0.9169	0.824	yes	no
Q8XW41	DNAJ_RALSO	No assigned EC number	0.3231	0.9436	0.8368	yes	no
Q2KIT4	DNJB4_BOVIN	No assigned EC number	0.4418	0.9643	0.9643	yes	no
C3MC05	DNAJ_RHISN	No assigned EC number	0.3252	0.9258	0.8232	yes	no
P25294	SIS1_YEAST	No assigned EC number	0.3667	0.9436	0.9034	yes	no
Q39JC7	DNAJ_BURS3	No assigned EC number	0.3140	0.9287	0.8280	yes	no
Q09912	PSI1_SCHPO	No assigned EC number	0.3860	0.9495	0.8443	yes	no
B4EDZ1	DNAJ_BURCJ	No assigned EC number	0.3140	0.9287	0.8280	yes	no
Q92T07	DNAJ_RHIME	No assigned EC number	0.3097	0.9287	0.8258	yes	no
B1YTK1	DNAJ_BURA4	No assigned EC number	0.3140	0.9287	0.8280	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	337
COG0484	371	COG0484, DnaJ, DnaJ-class molecular chaperone with	6e-73
PTZ00037	421	PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov	4e-58
PRK14291	382	PRK14291, PRK14291, chaperone protein DnaJ; Provis	7e-52
cd10747	158	cd10747, DnaJ_C, C-terminal substrate binding doma	1e-48
PRK14281	397	PRK14281, PRK14281, chaperone protein DnaJ; Provis	2e-44
PRK10767	371	PRK10767, PRK10767, chaperone protein DnaJ; Provis	1e-43
PRK14299	291	PRK14299, PRK14299, chaperone protein DnaJ; Provis	2e-43
TIGR02349	354	TIGR02349, DnaJ_bact, chaperone protein DnaJ	2e-42
PRK14292	371	PRK14292, PRK14292, chaperone protein DnaJ; Provis	2e-41
PRK14283	378	PRK14283, PRK14283, chaperone protein DnaJ; Provis	6e-37
PRK14286	372	PRK14286, PRK14286, chaperone protein DnaJ; Provis	3e-36
PRK14298	377	PRK14298, PRK14298, chaperone protein DnaJ; Provis	3e-36
PRK14294	366	PRK14294, PRK14294, chaperone protein DnaJ; Provis	7e-36
PRK14297	380	PRK14297, PRK14297, chaperone protein DnaJ; Provis	1e-33
PRK14279	392	PRK14279, PRK14279, chaperone protein DnaJ; Provis	2e-33
pfam00226	63	pfam00226, DnaJ, DnaJ domain	4e-33
PRK14280	376	PRK14280, PRK14280, chaperone protein DnaJ; Provis	5e-33
PRK14290	365	PRK14290, PRK14290, chaperone protein DnaJ; Provis	1e-32
PRK14295	389	PRK14295, PRK14295, chaperone protein DnaJ; Provis	4e-32
PRK14284	391	PRK14284, PRK14284, chaperone protein DnaJ; Provis	5e-32
PRK14301	373	PRK14301, PRK14301, chaperone protein DnaJ; Provis	9e-32
PRK14289	386	PRK14289, PRK14289, chaperone protein DnaJ; Provis	1e-31
PRK14276	380	PRK14276, PRK14276, chaperone protein DnaJ; Provis	3e-31
PRK14282	369	PRK14282, PRK14282, chaperone protein DnaJ; Provis	7e-31
PRK14293	374	PRK14293, PRK14293, chaperone protein DnaJ; Provis	2e-30
PRK14277	386	PRK14277, PRK14277, chaperone protein DnaJ; Provis	4e-30
PRK14278	378	PRK14278, PRK14278, chaperone protein DnaJ; Provis	6e-30
smart00271	60	smart00271, DnaJ, DnaJ molecular chaperone homolog	7e-30
PRK14285	365	PRK14285, PRK14285, chaperone protein DnaJ; Provis	2e-28
COG2214	237	COG2214, CbpA, DnaJ-class molecular chaperone [Pos	3e-28
PRK14288	369	PRK14288, PRK14288, chaperone protein DnaJ; Provis	5e-27
pfam01556	81	pfam01556, DnaJ_C, DnaJ C terminal domain	4e-26
PRK10266	306	PRK10266, PRK10266, curved DNA-binding protein Cbp	7e-26
cd06257	55	cd06257, DnaJ, DnaJ domain or J-domain	2e-25
PRK14296	372	PRK14296, PRK14296, chaperone protein DnaJ; Provis	2e-25
PRK14287	371	PRK14287, PRK14287, chaperone protein DnaJ; Provis	2e-23
PRK14300	372	PRK14300, PRK14300, chaperone protein DnaJ; Provis	6e-23
TIGR02349	354	TIGR02349, DnaJ_bact, chaperone protein DnaJ	1e-18
TIGR03835	871	TIGR03835, termin_org_DnaJ, terminal organelle ass	5e-17
PRK14278	378	PRK14278, PRK14278, chaperone protein DnaJ; Provis	3e-15
COG5407	610	COG5407, SEC63, Preprotein translocase subunit Sec	5e-13
PRK14282	369	PRK14282, PRK14282, chaperone protein DnaJ; Provis	1e-12
PRK14289	386	PRK14289, PRK14289, chaperone protein DnaJ; Provis	4e-12
PRK14294	366	PRK14294, PRK14294, chaperone protein DnaJ; Provis	5e-11
PRK10767	371	PRK10767, PRK10767, chaperone protein DnaJ; Provis	1e-10
PRK14277	386	PRK14277, PRK14277, chaperone protein DnaJ; Provis	1e-09
PRK14284	391	PRK14284, PRK14284, chaperone protein DnaJ; Provis	2e-09
PRK14293	374	PRK14293, PRK14293, chaperone protein DnaJ; Provis	5e-09
PTZ00341	1136	PTZ00341, PTZ00341, Ring-infected erythrocyte surf	5e-09
PRK14301	373	PRK14301, PRK14301, chaperone protein DnaJ; Provis	3e-08
PRK14300	372	PRK14300, PRK14300, chaperone protein DnaJ; Provis	4e-06
COG5269	379	COG5269, ZUO1, Ribosome-associated chaperone zuoti	7e-06
PRK14290	365	PRK14290, PRK14290, chaperone protein DnaJ; Provis	2e-05
COG1076	174	COG1076, DjlA, DnaJ-domain-containing proteins 1 [	1e-04
PRK09430	267	PRK09430, djlA, Dna-J like membrane chaperone prot	1e-04
TIGR00714	155	TIGR00714, hscB, Fe-S protein assembly co-chaperon	3e-04
COG1076	174	COG1076, DjlA, DnaJ-domain-containing proteins 1 [	6e-04
PRK03578	176	PRK03578, hscB, co-chaperone HscB; Provisional	7e-04
PRK00294	173	PRK00294, hscB, co-chaperone HscB; Provisional	0.001
PHA02624	647	PHA02624, PHA02624, large T antigen; Provisional	0.001
PRK05014	171	PRK05014, hscB, co-chaperone HscB; Provisional	0.003

>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

 Score =  229 bits (587), Expect = 6e-73
 Identities = 118/369 (31%), Positives = 167/369 (45%), Gaps = 62/369 (16%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
              DYY IL V+K+A+E+++KK+YRKLA K+HPD+NP   KEAE +FK+I+EAYEVLSDP
Sbjct: 2   AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNP-GDKEAEEKFKEINEAYEVLSDP 60

Query: 61  QKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFG-FG 119
           +KRA YDQ+G  G K        G     G G    G +     DIF +FFG    G   
Sbjct: 61  EKRAAYDQFGHAGFKA------GG---FGGFGFGGFGGDF---GDIFEDFFGGGGGGRRR 108

Query: 120 SAGPGKSTRFQSEGGGTFGGFGMG---ENIFRTYS-------DGSVPRKPPPVESKLPCS 169
              P +    +     T      G   E               G+ P   P       C+
Sbjct: 109 PNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAKPGTDPKTCPT--CN 166

Query: 170 LEELYSGSTRK------MKISRTVVDANGR---------------QTPESEILTIDVKPG 208
                SG  R           +T    NG                +  + + +++++  G
Sbjct: 167 ----GSGQVRTVQRTGFFSFQQTCPTCNGTGKIIKDPCGKCKGKGRVKKKKSISVNIPAG 222

Query: 209 WKKGTKITFPDKGNEQPNQLPA-DLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTS 267
              G +I    +G   PN  PA DL   +  KPH +++RD +DL     +S  EA  G  
Sbjct: 223 VDDGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGE 282

Query: 268 VSLITLDGRDLNIAVTDIISPGFELG----IPGEGMPIAREPGNRGDLRIKFEVKFPTKL 323
           + + TLDGR     V   I  G + G    + G+GMP  R  G RGDL ++ +V+ P  L
Sbjct: 283 IEVPTLDGR-----VKLKIPAGTQTGEVFRLRGKGMPKLR-SGGRGDLYVRVKVETPKNL 336

Query: 324 TPEQRAGLK 332
           + EQ+  L+
Sbjct: 337 SDEQKELLE 345

Length = 371

>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional

 Score =  193 bits (491), Expect = 4e-58
 Identities = 124/393 (31%), Positives = 180/393 (45%), Gaps = 126/393 (32%)

Query: 5   YYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRA 64
            Y +L ++K+ T  ++KK+YRKLA+K HPDK  + +K     FK+IS AYEVLSDP+KR 
Sbjct: 30  LYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDPEK-----FKEISRAYEVLSDPEKRK 84

Query: 65  IYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPG 124
           IYD+YGEEGL+                     G  P +A D+F   FG      G   PG
Sbjct: 85  IYDEYGEEGLEG--------------------GEQPADASDLFDLIFG------GGRKPG 118

Query: 125 KSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPPVESKLPCSLEELYSGSTRKMKIS 184
              R              GE+I                 S L  +LE++Y+G+ RK+ I+
Sbjct: 119 GKKR--------------GEDIV----------------SHLKVTLEQIYNGAMRKLAIN 148

Query: 185 RTVVDAN----------------------------------------------GRQTPES 198
           + V+ AN                                              G+  PES
Sbjct: 149 KDVICANCEGHGGPKDAFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIPES 208

Query: 199 E---------------ILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDV 243
           +               IL +++  G     KITF  + +E+PN++P ++VF+++EKPHD 
Sbjct: 209 KKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFHGEADEKPNEIPGNVVFILNEKPHDT 268

Query: 244 YKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVT--DIISPGFELGIPGEGMPI 301
           +KR+  DL +  K+SL EAL G    +  LDGR L +     +++ PG    I  EGMP 
Sbjct: 269 FKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVINNEGMPT 328

Query: 302 AREPGNRGDLRIKFEVKFPT--KLTPEQRAGLK 332
            + P  +G+L + FEV FP   K T E++  LK
Sbjct: 329 YKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILK 361

Length = 421

>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional

 Score =  175 bits (446), Expect = 7e-52
 Identities = 108/362 (29%), Positives = 171/362 (47%), Gaps = 61/362 (16%)

Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
           DYY IL V++NAT++++KK+YR+LA K+HPD N N   EAE +FK+I+EAY+VLSDP+KR
Sbjct: 4   DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN--PEAEEKFKEINEAYQVLSDPEKR 61

Query: 64  AIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGP 123
            +YDQ+G                +++  GGN         EDI  + F    FGFG    
Sbjct: 62  KLYDQFGHAAFSGSGQQQQGQEGFSDFGGGN--------IEDILEDVFDI--FGFGDIFG 111

Query: 124 GKSTRFQSEGGGTFGGFGMGENIFRT--------YSDGSVPRKPPPVESKLPCSL---EE 172
            +  R   E   T+     GE+I++T        Y+  +V      V   +PC       
Sbjct: 112 RR--RATRERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSL---EVPRYVPCEACGGTG 166

Query: 173 LYSGSTRK-----------------MKISRTVVDA-------------NGRQT-PESEIL 201
              GS  K                  +IS+T                 NGR    + E +
Sbjct: 167 YDPGSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGVLREPCSKCNGRGLVIKKETI 226

Query: 202 TIDVKPGWKKGTKITFPDKGNEQPNQ-LPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLA 260
            + + PG   G+K+  P KG+       P DL  ++  KPH +++R  ++L ++  +++A
Sbjct: 227 KVRIPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVA 286

Query: 261 EALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFP 320
           EA+ GT + +  LDG+   + +      G ++ +PG+GMP  +  G  GDL ++  +  P
Sbjct: 287 EAVLGTELEVPLLDGKKEKVKIPPGTKEGDKIRVPGKGMPRLKGSG-YGDLVVRVHIDVP 345

Query: 321 TK 322
             
Sbjct: 346 KI 347

Length = 382

>gnl|CDD|199909 cd10747, DnaJ_C, C-terminal substrate binding domain of DnaJ and HSP40

 Score =  160 bits (407), Expect = 1e-48
 Identities = 59/165 (35%), Positives = 86/165 (52%), Gaps = 8/165 (4%)

Query: 160 PPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPD 219
             +   L  +LEE Y G  +++KI R V      +  E + LT+ +  G   G ++    
Sbjct: 1   ADLRYDLELTLEEAYFGKEKEIKIPRKVT-----RVREKKTLTVKIPAGVDDGQRLRLRG 55

Query: 220 KGNEQPNQLPA-DLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDL 278
           +G+  PN  P  DL  VI  KPH V++RD NDL     +SL EAL G  + + TL G  +
Sbjct: 56  EGDAGPNGGPPGDLYVVIRVKPHPVFRRDGNDLYCEVPISLTEALLGGEIEVPTLGG-KV 114

Query: 279 NIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKL 323
            + +     PG  L + G+GMP  R  G RGDL ++ +V+FP KL
Sbjct: 115 KLKIPPGTQPGTVLRLKGKGMPRLR-GGGRGDLYVEVKVEFPKKL 158

The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70. Length = 158

>gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional

 Score =  156 bits (396), Expect = 2e-44
 Identities = 124/392 (31%), Positives = 183/392 (46%), Gaps = 85/392 (21%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
           M  DYY +L V+++A +D++KK+YRKLA+K+HPDKNP++ KEAE  FK+++EAYEVLS+ 
Sbjct: 1   MKRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDN-KEAEEHFKEVNEAYEVLSND 59

Query: 61  QKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGS 120
            KR  YDQ+G  G+      SS+      G GG    FN     DIF+ F  +  FG G+
Sbjct: 60  DKRRRYDQFGHAGV-----GSSAASGGGPGYGGGGGDFN-----DIFSAF--NDMFGGGA 107

Query: 121 AGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPPVESKLPCSLEELYSGSTRK 180
              G S          FGG G      R  +   +P     +  KL  +LEE+  G  + 
Sbjct: 108 RRGGGSP---FGFEDVFGGGGR-----RRRASAGIPGTDLKIRLKL--TLEEIAKGVEKT 157

Query: 181 MKISRTVV----DANGRQTPESEI---------------------LTIDVKP-------- 207
           +KI + V     +  G +T  +E                      + I   P        
Sbjct: 158 LKIKKQVPCKECNGTGSKTGATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRV 217

Query: 208 -----------GWKKG---TKITFP------------DKGNEQP-NQLPADLVFVIDEKP 240
                      G K+G    K+T P             +GN  P    P DL+ VI+EKP
Sbjct: 218 VKDRCPACYGEGIKQGEVTVKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKP 277

Query: 241 HDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMP 300
           H+++ R+ +D+I N  VS  + + GT V + TLDG    + +     P   L IPG+G+ 
Sbjct: 278 HELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGAV-KLTIPAGTQPETMLRIPGKGIG 336

Query: 301 IAREPGNRGDLRIKFEVKFPTKLTPEQRAGLK 332
             R  G RGD  ++  V  P +++ + +  LK
Sbjct: 337 HLRGSG-RGDQYVRVNVFVPKEVSHQDKELLK 367

Length = 397

>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional

 Score =  153 bits (389), Expect = 1e-43
 Identities = 62/125 (49%), Positives = 77/125 (61%), Gaps = 15/125 (12%)

Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
           DYY +L V++NA+ED++KK+YRKLAMK+HPD+NP D KEAE +FK+I EAYEVLSDPQKR
Sbjct: 5   DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGD-KEAEEKFKEIKEAYEVLSDPQKR 63

Query: 64  AIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGP 123
           A YDQYG    +        G     G GG    F      DIF + FG    G    G 
Sbjct: 64  AAYDQYGHAAFE-----QGGGGGGFGGGGGFGDIF-----GDIFGDIFG----GGRGGGR 109

Query: 124 GKSTR 128
            ++ R
Sbjct: 110 QRARR 114

Length = 371

>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional

 Score =  150 bits (381), Expect = 2e-43
 Identities = 108/330 (32%), Positives = 163/330 (49%), Gaps = 60/330 (18%)

Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
           DYY IL V KNA++D++KK+++KLA K+HPD N +    AE +FK+I+EAY VLSDP+KR
Sbjct: 5   DYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS--PGAEEKFKEINEAYTVLSDPEKR 62

Query: 64  AIYDQYGEE----GLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFG 119
            IYD YG      G +  PP    G  ++        GFN  +  D F + FG       
Sbjct: 63  RIYDTYGTTAASAGWQGPPPGPPGGGDFS--------GFNVGDFSDFFQQLFG------- 107

Query: 120 SAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPPVESKLPCSLEELYSGSTR 179
                        G G FGGFG   ++F +    +  RK   +E++LP +LEE Y G  +
Sbjct: 108 -------------GRGGFGGFG---DLFGSVGRRA--RKGRDLEAELPLTLEEAYRGGEK 149

Query: 180 KMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEK 239
            ++++              E L++ + PG ++G  I    KG +       DL  V+   
Sbjct: 150 VVEVA-------------GERLSVRIPPGVREGQVIRLAGKGRQG-----GDLYLVVRLL 191

Query: 240 PHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGM 299
           PH V++ + +DL     V    A+ G  V ++TLDG  + + +      G +L + G+G 
Sbjct: 192 PHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDG-PVEVTIPPRTQAGRKLRLKGKGW 250

Query: 300 PIAREPGNRGDLRIKFEVKFPTKLTPEQRA 329
           P  R P  RGD   +  +  PT+ TPE+  
Sbjct: 251 P--RGPAGRGDQYAEVRITIPTRPTPEEER 278

Length = 291

>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ

 Score =  150 bits (380), Expect = 2e-42
 Identities = 67/185 (36%), Positives = 92/185 (49%), Gaps = 40/185 (21%)

Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
           DYY IL V+K+A+E+++KK+YRKLA K+HPD+N +  KEAE +FK+I+EAYEVLSDP+KR
Sbjct: 1   DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKR 58

Query: 64  AIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGP 123
           A YDQ+G  G          G      +G +   F      DIF +FFG           
Sbjct: 59  AQYDQFGHAGFN-----GGGGGGGGGFNGFDIGFFGD--FGDIFGDFFG----------- 100

Query: 124 GKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPPVESKLPCSLEELYSGSTRKMKI 183
                         GG G G          S PR+   +   L  + EE   G  ++++I
Sbjct: 101 --------------GGGGSGR------RRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEI 140

Query: 184 SRTVV 188
            R   
Sbjct: 141 PRKES 145

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354

>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional

 Score =  148 bits (374), Expect = 2e-41
 Identities = 114/371 (30%), Positives = 171/371 (46%), Gaps = 59/371 (15%)

Query: 3   MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQK 62
           MDYY +L V++ A+ D++K +YRKLA+K+HPD+N   +K A  +F QI+EAY VLSD +K
Sbjct: 2   MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNK--EKGAAEKFAQINEAYAVLSDAEK 59

Query: 63  RAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPF--GFGS 120
           RA YD++G      MP             GG+  G    +  DIF + FG + F  G G 
Sbjct: 60  RAHYDRFGTAPGAGMP-------------GGDPFGGMGFDPMDIFEQLFGGAGFGGGRGR 106

Query: 121 AGPGKSTRFQSEGGGTFGGFGMGENIFRTY--------------SDGSVPRKPPP----- 161
            GP +    ++E   T      GE +                    G  P K  P     
Sbjct: 107 RGPARGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKTCPTCRGA 166

Query: 162 -------------VESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPG 208
                        VE++ PC       G  + +    TV    GR T ++E + + +  G
Sbjct: 167 GAVRAQARTIFGVVETQQPCP---TCRGEGQIITDPCTVCRGRGR-TLKAETVKVKLPRG 222

Query: 209 WKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSV 268
             +G +I     GNE P     DL   I+ +PH   +R+   LI   ++  A+A  G  +
Sbjct: 223 IDEGYRIRVAGMGNEGPGG-NGDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQI 281

Query: 269 SLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQR 328
           ++ TLDG  + I V      G    + G+GMP  +  G  GDL +++E+  P +L+PE R
Sbjct: 282 TVPTLDGPQV-IEVKPGTQHGDLHRLRGQGMPRLQGAGT-GDLIVEYEIAVPKQLSPEAR 339

Query: 329 AGLK---RALG 336
             L+   RA+G
Sbjct: 340 EALEAYARAVG 350

Length = 371

>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional

 Score =  136 bits (343), Expect = 6e-37
 Identities = 110/375 (29%), Positives = 172/375 (45%), Gaps = 73/375 (19%)

Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
           DYY +L V++NA + ++KK+YRKLA K+HPD +  +++ AE +FK+ISEAY VLSD +KR
Sbjct: 6   DYYEVLGVDRNADKKEIKKAYRKLARKYHPDVS--EEEGAEEKFKEISEAYAVLSDDEKR 63

Query: 64  AIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEF---FGS--SPFGF 118
             YDQ+G  G+         G+S           FN  N EDIF  F    G+    FGF
Sbjct: 64  QRYDQFGHAGM--------DGFS-------QEDIFNNINFEDIFQGFGFGIGNIFDMFGF 108

Query: 119 G---SAGPGKSTRFQSEGGGTFGGFGMG-ENIFRTYSDGSVP-----RKPPPVESKLPCS 169
           G     GP +     +E   T      G E   +       P     R  P  E K  C 
Sbjct: 109 GGGSRHGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSEVK-TC- 166

Query: 170 LEELYSGSTRKMKISRTVVD--ANGRQTP-----------------------ESEILTID 204
                 G+ +  ++  T++    N    P                       E++ +++ 
Sbjct: 167 --PTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVK 224

Query: 205 VKPGWKKGTKITFPDKGN--EQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEA 262
           +  G + G+++    +G   ++  + P DL  VI  KPH +++R+  +L     +S  +A
Sbjct: 225 IPAGVETGSRLRVSGEGEMGDRGGE-PGDLYVVIKVKPHKIFRREGANLYYEKPISFVQA 283

Query: 263 LGGTSVSLITLDGRDLNIAVTDIISPGFELG----IPGEGMPIAREPGNRGDLRIKFEVK 318
             G +V + T+DG      V   I  G + G    + G GMP  R  G +G+L +K +V 
Sbjct: 284 ALGDTVDVPTIDG-----PVELKIPAGTQSGTTFRLKGHGMPSLRWSG-KGNLYVKVKVV 337

Query: 319 FPTKLTPEQRAGLKR 333
            P KL+P+Q+  L+ 
Sbjct: 338 VPKKLSPKQKELLRE 352

Length = 378

>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional

 Score =  134 bits (338), Expect = 3e-36
 Identities = 110/367 (29%), Positives = 177/367 (48%), Gaps = 67/367 (18%)

Query: 5   YYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRA 64
           YY+IL V+K+A ++++K +YRKLA+K+HPDKN  + KE+E +FK+ +EAYE+L DP+KR 
Sbjct: 6   YYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGN-KESEEKFKEATEAYEILRDPKKRQ 64

Query: 65  IYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAE------DIFAEFFGSSPFGF 118
            YDQ+G+ G+               G+GG  +G     ++      DIF +FFG    G 
Sbjct: 65  AYDQFGKAGV-------------NAGAGGFGQGAYTDFSDIFGDFGDIFGDFFG----GG 107

Query: 119 GSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPR----KPPPVESKLPCSLEELY 174
              G G   R      G   G  +  N+  +  D ++ R    + P +ES + C+     
Sbjct: 108 RGGGSGGGRR-----SGPQRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGAS 162

Query: 175 SGSTRKM--------KISRT-----------------VVDANGRQTPESEILT------- 202
            GS+           +I RT                  V +N  +T   + L        
Sbjct: 163 KGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTIN 222

Query: 203 IDVKPGWKKGTKITFPDKGNEQPNQLP-ADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAE 261
           I + PG + G+++    +G   PN  P  DL  V   K H++++R  NDLI+  K+SLA+
Sbjct: 223 IKIPPGVETGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQ 282

Query: 262 ALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPT 321
           A+ G  + + T+DG+   + + +    G    + G GMP     G +GD  +  +++ P 
Sbjct: 283 AILGAEIEVPTIDGKKAKMKIPEGTESGQVFRLKGHGMPYLGAYG-KGDQHVIVKIEIPK 341

Query: 322 KLTPEQR 328
           K+T  QR
Sbjct: 342 KITRRQR 348

Length = 372

>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional

 Score =  134 bits (338), Expect = 3e-36
 Identities = 116/368 (31%), Positives = 172/368 (46%), Gaps = 66/368 (17%)

Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
           DYY IL ++K+A+ +D+KK+YRKLAMK+HPDK  N + +AE +FK+ISEAY VLSD +KR
Sbjct: 6   DYYEILGLSKDASVEDIKKAYRKLAMKYHPDK--NKEPDAEEKFKEISEAYAVLSDAEKR 63

Query: 64  AIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGP 123
           A YD++G  G+        + YS  +   G   G       DIF  FFG      G  GP
Sbjct: 64  AQYDRFGHAGI-------DNQYSAEDIFRGADFG----GFGDIFEMFFGGGG-RRGRMGP 111

Query: 124 GKSTRFQSEGGGTF--GGFGMGENIFRTYSDGSVPR------------KPPPVESKLP-C 168
            + +  + +   T     FG+ ++I        VPR            KP     + P C
Sbjct: 112 RRGSDLRYDLYITLEEAAFGVRKDI-------DVPRAERCSTCSGTGAKPGTSPKRCPTC 164

Query: 169 --SLEELYSGSTRKMK-ISRTVVDA-NGR-QTPES--------------EILTIDVKPGW 209
             + +   + ST   + ++ T     +GR Q  ES                +T++V  G 
Sbjct: 165 GGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGA 224

Query: 210 KKGTKITFPDKGNE-QPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSV 268
             G ++    +G    P     DL  V+  K HD ++R  +D+I    +S  +A  G  +
Sbjct: 225 DSGLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADI 284

Query: 269 SLITLDGRDLNIAVTDIISPGFE----LGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLT 324
            + TL G+     V   I PG +      +  +GMP     G +GD  +K  VK PTKLT
Sbjct: 285 MVPTLYGK-----VKMNIPPGTQTHSVFRLKDKGMPRLHGHG-KGDQLVKVIVKTPTKLT 338

Query: 325 PEQRAGLK 332
            EQ+  L+
Sbjct: 339 QEQKELLR 346

Length = 377

>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional

 Score =  132 bits (335), Expect = 7e-36
 Identities = 65/123 (52%), Positives = 80/123 (65%), Gaps = 15/123 (12%)

Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
           DYY IL V ++A+E+++KKSYRKLAMK+HPD+NP D KEAE  FK+ +EAYEVLSDP+KR
Sbjct: 5   DYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGD-KEAEELFKEAAEAYEVLSDPKKR 63

Query: 64  AIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGP 123
            IYDQYG EGL     S  SG+     S G           DIF +FFG   FG G  G 
Sbjct: 64  GIYDQYGHEGLSGTGFSGFSGFDDIFSSFG-----------DIFEDFFG---FGGGRRGR 109

Query: 124 GKS 126
            ++
Sbjct: 110 SRT 112

Length = 366

>gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional

 Score =  127 bits (320), Expect = 1e-33
 Identities = 110/392 (28%), Positives = 157/392 (40%), Gaps = 106/392 (27%)

Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
           DYY +L + K A++D++KK++RKLA+K+HPDKN  +K EAE +FK+I+EAY+VLSDPQK+
Sbjct: 5   DYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNK-EAEEKFKEINEAYQVLSDPQKK 63

Query: 64  AIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGP 123
           A YDQ+G                  NG+GG   G         F  F  S   GFG    
Sbjct: 64  AQYDQFGTADF--------------NGAGGFGSGG--------FGGFDFSDMGGFGDI-- 99

Query: 124 GKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPPVESKLPCSLEELYSGSTRKMKI 183
                F S  GG FG      N          P++   +E  +  + EE   G  +++ +
Sbjct: 100 -----FDSFFGGGFGSSSRRRN---------GPQRGADIEYTINLTFEEAVFGVEKEISV 145

Query: 184 -------------------SRTVVDANG-------RQTPESEIL---TIDVKPGWKKGTK 214
                               +T     G       R TP    +   T D   G   G  
Sbjct: 146 TRNENCETCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGG--SGKV 203

Query: 215 ITFP------------------------DKGNEQP----------NQLPADLVFVIDEKP 240
           I  P                        D GN  P               DL   I   P
Sbjct: 204 IEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVIPLRGQGEHGKNGGPTGDLYINIRVAP 263

Query: 241 HDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMP 300
           H  +KR   D+ ++  +S A+A  GT + + T+DG ++   V     PG    + G+G+P
Sbjct: 264 HKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDG-EVKYEVPAGTQPGTVFRLKGKGVP 322

Query: 301 IAREPGNRGDLRIKFEVKFPTKLTPEQRAGLK 332
                G RG+  +   V  P KL  +Q+  L 
Sbjct: 323 RVNSTG-RGNQYVTVIVDIPKKLNSKQKEALT 353

Length = 380

>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional

 Score =  126 bits (319), Expect = 2e-33
 Identities = 100/375 (26%), Positives = 153/375 (40%), Gaps = 55/375 (14%)

Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
           D+Y  L V+ +A+ +++KK+YRKLA + HPD NP D   AE RFK +SEA++VLSDP KR
Sbjct: 10  DFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPA-AEERFKAVSEAHDVLSDPAKR 68

Query: 64  AIYDQ----YGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPR------------NAEDIF 107
             YD+    +   G          G+    G+GG+   FN                 D+F
Sbjct: 69  KEYDETRRLFAGGGFGGRRFDGGGGFG-GFGTGGDGAEFNLNDLFDAAGRGGGGGIGDLF 127

Query: 108 AEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENI-FRTYSD---------GSVPR 157
              F         + P +    ++E    F     G  +  R  S          G+ P 
Sbjct: 128 GGLFNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVTMPLRLTSPAPCTTCHGSGARPG 187

Query: 158 KPPPVESKL-----------------PCSLEELYSGSTRKMKISRTVVDANGR-QTPESE 199
             P V                     PC+ +   +GS     I     +  G   T  + 
Sbjct: 188 TSPKVCPTCNGSGVISRNQGAFGFSEPCT-DCRGTGSI----IEDPCEECKGTGVTTRTR 242

Query: 200 ILTIDVKPGWKKGTKITFPDKGNEQPNQLPA-DLVFVIDEKPHDVYKRDSNDLIVNHKVS 258
            + + + PG + G +I    +G       P+ DL   +  +P  V+ RD +DL V   VS
Sbjct: 243 TINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVS 302

Query: 259 LAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVK 318
             E   G+++S+ TLDG  + + V    + G  L + G G+P  +  G  GDL +  +V 
Sbjct: 303 FTELALGSTLSVPTLDGP-VGVKVPAGTADGRILRVRGRGVP--KRSGGAGDLLVTVKVA 359

Query: 319 FPTKLTPEQRAGLKR 333
            P  L       L+ 
Sbjct: 360 VPPNLDGAAAEALEA 374

Length = 392

>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain

 Score =  116 bits (294), Expect = 4e-33
 Identities = 42/64 (65%), Positives = 56/64 (87%), Gaps = 1/64 (1%)

Query: 4  DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
          DYY IL V ++A+++++KK+YRKLA+K+HPDKNP D   AE +FK+I+EAYEVLSDP+KR
Sbjct: 1  DYYEILGVPRDASDEEIKKAYRKLALKYHPDKNPGD-PAAEEKFKEINEAYEVLSDPEKR 59

Query: 64 AIYD 67
          AIYD
Sbjct: 60 AIYD 63

DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature. Length = 63

>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional

 Score =  125 bits (316), Expect = 5e-33
 Identities = 113/369 (30%), Positives = 166/369 (44%), Gaps = 65/369 (17%)

Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEA--RFKQISEAYEVLSDPQ 61
           DYY +L V+K+A++D++KK+YRKL+ K+HPD N    KE  A  +FK+ISEAYEVLSD Q
Sbjct: 5   DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDIN----KEEGADEKFKEISEAYEVLSDDQ 60

Query: 62  KRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSA 121
           KRA YDQ+G  G    P     G  +  G  G   GF     EDIF+ FFG         
Sbjct: 61  KRAQYDQFGHAG----PNQGFGGGGFGGGDFGGGFGF-----EDIFSSFFGGGGRRRDPN 111

Query: 122 GPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP----------PVESKLPCS-- 169
            P +    Q     TF      E +F    +  +P++            P  SK  CS  
Sbjct: 112 APRQGADLQYTMTLTF-----EEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHC 166

Query: 170 -------LEE--------------LYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPG 208
                  +E+                +G+ +++K         G+     +I  + +  G
Sbjct: 167 GGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVRKRKKI-NVKIPAG 225

Query: 209 WKKGTKITFPDKGNEQPNQLPA-DLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTS 267
              G +I    +G    N  PA DL  V   +PH+ ++RD +D+     ++ A+A  G  
Sbjct: 226 VDNGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDE 285

Query: 268 VSLITLDGRDLNIAVTDIISPGFELG----IPGEGMPIAREPGNRGDLRIKFEVKFPTKL 323
           + + TL G+     V   I  G + G    + G+G+P  R  G  GD  +   V  PTKL
Sbjct: 286 IEVPTLHGK-----VKLKIPAGTQTGTQFRLKGKGVPNVRGYGQ-GDQYVVVRVVTPTKL 339

Query: 324 TPEQRAGLK 332
           T  Q+  L+
Sbjct: 340 TDRQKELLR 348

Length = 376

>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional

 Score =  124 bits (312), Expect = 1e-32
 Identities = 74/205 (36%), Positives = 104/205 (50%), Gaps = 41/205 (20%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
           M  DYY IL V++NA+++D+KK++R+LA KWHPD +P +K EAE +FK+ISEAYEVLSDP
Sbjct: 1   MAKDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDP 60

Query: 61  QKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNP-RNAEDIFAEFFGSSPFGFG 119
           QKR  YDQ G                 A GS  N   F    +  DIF + FG +   FG
Sbjct: 61  QKRRQYDQTGTVDFG------------AGGSNFNWDNFTHFSDINDIFNQIFGGN---FG 105

Query: 120 SAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPPVESKLPCSLEELYSGSTR 179
           S                F GFG  ++      D         + + L  SLE+ Y G+ +
Sbjct: 106 SD--------------FFSGFGNQQSTRNIDLD---------IYTNLDISLEDAYYGTEK 142

Query: 180 KMKISRTVV--DANGRQTPESEILT 202
           ++K  R  +  D +G      +++T
Sbjct: 143 RIKYRRNAMCPDCSGTGAKNGKLIT 167

Length = 365

>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional

 Score =  123 bits (310), Expect = 4e-32
 Identities = 109/371 (29%), Positives = 154/371 (41%), Gaps = 53/371 (14%)

Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
           DYY +L V K+ATE ++KK+YRKLA ++HPD N  D K AE RFK+ISEAY+VLSD +KR
Sbjct: 10  DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAK-AEERFKEISEAYDVLSDEKKR 68

Query: 64  AIYDQ----YGEEGLKDMPPSSSSGYS-------YANGSGGNSKGFNPRNAEDIFAEFFG 112
             YD+    +G  G +  P     G         +  G+ G           D+F   F 
Sbjct: 69  KEYDEARSLFGNGGFRPGPGGGGGGGFNFDLGDLFGGGAQGGGGAGGGGGLGDVFGGLFN 128

Query: 113 SSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENI-FRTYSD-------------GSVPRK 158
               G     P +    +SE   +F     G  +  R  S              G+ PR 
Sbjct: 129 R---GGRRTQPRRGADVESEVTLSFTEAIDGATVPLRLTSQAPCPACSGTGAKNGTTPRV 185

Query: 159 PPPVESKLPCSLEELYSGSTRKMKISRTVVDANGR---------------QTPESEILTI 203
            P       CS     S ++    +S    D  GR               +   S  + +
Sbjct: 186 CPT------CSGTGQVSRNSGGFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQV 239

Query: 204 DVKPGWKKGTKITFPDKGNEQPNQLPA-DLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEA 262
            +  G   G +I    KG       PA DL  V+   PH V+ R  ++L V   V+  EA
Sbjct: 240 RIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEA 299

Query: 263 LGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTK 322
             G  V + TL G  + + +      G  L + G+G    R+ G RGDL +  EV  P  
Sbjct: 300 ALGAEVRVPTLGGPPVTVKLPPGTPNGRVLRVRGKGAV--RKDGTRGDLLVTVEVAVPKD 357

Query: 323 LTPEQRAGLKR 333
           L+ + R  L+ 
Sbjct: 358 LSGKAREALEA 368

Length = 389

>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional

 Score =  123 bits (309), Expect = 5e-32
 Identities = 72/182 (39%), Positives = 98/182 (53%), Gaps = 26/182 (14%)

Query: 3   MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQK 62
           MDYY IL V+K A+ +++KK+YRKLA+K+HPDKNP D  EAE RFK++SEAYEVLSD QK
Sbjct: 1   MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGD-AEAEKRFKEVSEAYEVLSDAQK 59

Query: 63  RAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAG 122
           R  YD+YG++G           ++ A G GG   G    N ED    F G+    FG   
Sbjct: 60  RESYDRYGKDGP----------FAGAGGFGGAGMG----NMEDALRTFMGA----FGGEF 101

Query: 123 PGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPPVESKLPCSLEELYSGSTRKMK 182
            G  + F+   GG    FGM           +  R+    +  +  S EE   G  +++ 
Sbjct: 102 GGGGSFFEGLFGGLGEAFGM-------RGGPAGARQGASKKVHITLSFEEAAKGVEKELL 154

Query: 183 IS 184
           +S
Sbjct: 155 VS 156

Length = 391

>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional

 Score =  122 bits (307), Expect = 9e-32
 Identities = 59/131 (45%), Positives = 86/131 (65%), Gaps = 22/131 (16%)

Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
           DYY +L V+++A+ED++KK+YRKLA+++HPD+NP++  EAE +FK+ +EAYEVL D +KR
Sbjct: 5   DYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDN-PEAEQKFKEAAEAYEVLRDAEKR 63

Query: 64  AIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEF---FGSSPFGFGS 120
           A YD++G  G+              NG+GG   GF+  +AEDIF+ F   FG   FGF  
Sbjct: 64  ARYDRFGHAGV--------------NGNGGFG-GFS--SAEDIFSHFSDIFGDL-FGFSG 105

Query: 121 AGPGKSTRFQS 131
            G  +  R Q+
Sbjct: 106 GGSRRGPRPQA 116

Length = 373

>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional

 Score =  121 bits (306), Expect = 1e-31
 Identities = 75/188 (39%), Positives = 103/188 (54%), Gaps = 40/188 (21%)

Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
           DYY +L V+K AT D++KK+YRK A+++HPDKNP D KEAE +FK+ +EAY+VLSDP KR
Sbjct: 6   DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGD-KEAEEKFKEAAEAYDVLSDPDKR 64

Query: 64  AIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEF---FGSSPFGFGS 120
           + YDQ+G  G+                +GG        + EDIF+ F   FG    GFG 
Sbjct: 65  SRYDQFGHAGV-------------GGAAGGGGFSGEGMSMEDIFSMFGDIFGGHGGGFG- 110

Query: 121 AGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPPVESKLPCSLEELYSGSTRK 180
                       G G FGG G  + +FR    GS  R    V+ KL  +L+E+ +G  +K
Sbjct: 111 ------------GFGGFGGGGSQQRVFR----GSDLR----VKVKL--NLKEISTGVEKK 148

Query: 181 MKISRTVV 188
            K+ + V 
Sbjct: 149 FKVKKYVP 156

Length = 386

>gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional

 Score =  120 bits (303), Expect = 3e-31
 Identities = 106/399 (26%), Positives = 160/399 (40%), Gaps = 122/399 (30%)

Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKE--AEARFKQISEAYEVLSDPQ 61
           +YY+ L V+K+A++D++KK+YRKL+ K+HPD N    KE  AE ++K++ EAYE LSDPQ
Sbjct: 5   EYYDRLGVSKDASQDEIKKAYRKLSKKYHPDIN----KEPGAEEKYKEVQEAYETLSDPQ 60

Query: 62  KRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSA 121
           KRA YDQYG  G              ANG                          GFG  
Sbjct: 61  KRAAYDQYGAAG--------------ANG--------------------------GFGGG 80

Query: 122 GPGKSTRFQSEGGGTFGGFGMGENIFRTYSDG-------SVPRKPPPVESKLPCSLEELY 174
             G        G    GGFG  E+IF ++  G       + PR+   ++ ++    EE  
Sbjct: 81  AGGFG------GFDGSGGFGGFEDIFSSFFGGGGARRNPNAPRQGDDLQYRVNLDFEEAI 134

Query: 175 SGSTRKMKISRTVV----DANG----------------------RQTP------------ 196
            G  +++  +R       + +G                       QTP            
Sbjct: 135 FGKEKEVSYNREATCHTCNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDV 194

Query: 197 --------------------ESEILTIDVK--PGWKKGTKITFPDKGNEQPNQLP-ADLV 233
                               E +  T+ VK   G + G +I    +G    N  P  DL 
Sbjct: 195 CHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVETGQQIRLQGQGEAGFNGGPYGDLY 254

Query: 234 FVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELG 293
            V   +P   ++RD + +     +S  +A  G +V + T+ G D+ + +      G +  
Sbjct: 255 VVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHG-DVELKIPAGTQTGKKFR 313

Query: 294 IPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLK 332
           + G+G P  R  GN GD  +   +  PTKL   Q+  LK
Sbjct: 314 LRGKGAPKLRGGGN-GDQHVTVNIVTPTKLNDAQKEALK 351

Length = 380

>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional

 Score =  119 bits (300), Expect = 7e-31
 Identities = 54/117 (46%), Positives = 76/117 (64%), Gaps = 13/117 (11%)

Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
           DYY IL V++NAT++++K++Y++L  +WHPD++P ++KEAE +FK+I EAYEVLSDPQKR
Sbjct: 5   DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKR 64

Query: 64  AIYDQYGEEGLKDMPPSSSSGYSYANGSGGNS-----KGFNPRNAEDIFAEFFGSSP 115
           A+YD++G  G  + PP   +       SGG       K F      DIF  FFG   
Sbjct: 65  AMYDRFGYVG--EQPPYQET------ESGGGFFEDIFKDFENIFNRDIFDIFFGERR 113

Length = 369

>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional

 Score =  118 bits (297), Expect = 2e-30
 Identities = 59/130 (45%), Positives = 77/130 (59%), Gaps = 24/130 (18%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKE--AEARFKQISEAYEVLS 58
           M  DYY IL V+++A +D+LK++YR+LA K+HPD N    KE  AE RFK+I+ AYEVLS
Sbjct: 1   MAADYYEILGVSRDADKDELKRAYRRLARKYHPDVN----KEPGAEDRFKEINRAYEVLS 56

Query: 59  DPQKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGF 118
           DP+ RA YDQ+GE G+     S ++G+      GG +         DIF  FF     GF
Sbjct: 57  DPETRARYDQFGEAGV-----SGAAGFPDMGDMGGFA---------DIFETFFS----GF 98

Query: 119 GSAGPGKSTR 128
           G AG     R
Sbjct: 99  GGAGGQGGRR 108

Length = 374

>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional

 Score =  117 bits (295), Expect = 4e-30
 Identities = 69/183 (37%), Positives = 96/183 (52%), Gaps = 33/183 (18%)

Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
           DYY IL V++NATE+++KK+YR+LA K+HPD NP D KEAE +FK+I+EAYE+LSDPQKR
Sbjct: 6   DYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGD-KEAEQKFKEINEAYEILSDPQKR 64

Query: 64  AIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGP 123
           A YDQ+G       P     G     G GG    F+     DIF + FG     FG+   
Sbjct: 65  AQYDQFGHAAFD--PGGFGQGGFGQGGFGGGGFDFDFGGFGDIFEDIFGD---FFGTG-- 117

Query: 124 GKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPPVESKLPCSLEELYSGSTRKMKI 183
               R ++E G                     P+K   +   L  + EE   G+ +++++
Sbjct: 118 ----RRRAETG---------------------PQKGADIRYDLELTFEEAAFGTEKEIEV 152

Query: 184 SRT 186
            R 
Sbjct: 153 ERF 155

Length = 386

>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional

 Score =  117 bits (294), Expect = 6e-30
 Identities = 54/123 (43%), Positives = 73/123 (59%), Gaps = 18/123 (14%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
           M  DYY +L V++NA++ ++K++YRKLA + HPD NP++  EA+ +FK+IS AYEVLSDP
Sbjct: 1   MARDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDE--EAQEKFKEISVAYEVLSDP 58

Query: 61  QKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGS 120
           +KR I D  G+       P  S+G     G GG   G       D+F  FFG    G  S
Sbjct: 59  EKRRIVDLGGD-------PLESAG-GGGGGFGGGFGGLG-----DVFEAFFGG---GAAS 102

Query: 121 AGP 123
            GP
Sbjct: 103 RGP 105

Length = 378

>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain

 Score =  108 bits (271), Expect = 7e-30
 Identities = 40/60 (66%), Positives = 53/60 (88%)

Query: 3  MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQK 62
           DYY IL V ++A+ D++KK+YRKLA+K+HPDKNP DK+EAE +FK+I+EAYEVLSDP+K
Sbjct: 1  TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60

Length = 60

>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional

 Score =  113 bits (283), Expect = 2e-28
 Identities = 103/359 (28%), Positives = 158/359 (44%), Gaps = 54/359 (15%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
           M  DYY IL ++K A++D++KK+YRK+A+K+HPDKN  + KEAE+ FK+ +EAYEVL D 
Sbjct: 1   MKRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGN-KEAESIFKEATEAYEVLIDD 59

Query: 61  QKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGS 120
            KRA YD++G         ++  G     G  G   GF+     DIF E FG     F +
Sbjct: 60  NKRAQYDRFGH--------TAFEGGGGFEGFSGGFSGFS-----DIF-EDFGDIFDSFFT 105

Query: 121 AGPGKSTRFQSEGGGTFG------------GFGMGENIFRT-YSDGSVPRKPPPVESKLP 167
              G+    + E G                G+    NI R    +  + +K     S   
Sbjct: 106 GNRGQDKNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEKGTSPSI 165

Query: 168 CSLEELYSGSTRKMK--------------------ISRTVVDANGRQT-PESEILTIDVK 206
           C+   + +GS R M+                    IS       G+ +  + E + + + 
Sbjct: 166 CN---MCNGSGRVMQGGGFFRVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIP 222

Query: 207 PGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGG 265
            G     +I    KG+  P NQ   DL   I  KPH ++KR+  DL     +S  +A  G
Sbjct: 223 AGIDDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALG 282

Query: 266 TSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLT 324
             + + T+  + + I +        ++ I  EGMPI       G+L +  ++K P  L 
Sbjct: 283 KEIKIQTIASKKIKIKIPKGTENDEQIIIKNEGMPILHTE-KFGNLILIIKIKTPKNLN 340

Length = 365

>gnl|CDD|225124 COG2214, CbpA, DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

 Score =  109 bits (273), Expect = 3e-28
 Identities = 60/252 (23%), Positives = 99/252 (39%), Gaps = 27/252 (10%)

Query: 3   MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQK 62
           +DYY IL V  NA+ +++KK+YRKLA+K+HPD+NP D K AE +FK+I+EAYE+LSDP++
Sbjct: 6   LDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPER 65

Query: 63  RAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAG 122
           RA YD+ G +              +   S   S  F    +  +          G  +  
Sbjct: 66  RAEYDKIGAD------------NYFPGKSYRESAAFPIEGSLQL--TGLYEEWRGKRNKT 111

Query: 123 PGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPPVESKLPCSLEELYSGSTRKMK 182
             K++       G  G            +  S   +   + + L  + EE  +G  + + 
Sbjct: 112 ERKASLADLLSRGLSGLAAALSLFADEAALRSGSLRRRDLAANLADNFEEALAGVKKAVA 171

Query: 183 ISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHD 242
                           + L   +K G  +G  +       +               K H 
Sbjct: 172 RLL------------GKALKSTIKAGALEGKALRLKGLL-KSARGALGKARLKELSKRHP 218

Query: 243 VYKRDSNDLIVN 254
            +  + +D    
Sbjct: 219 PFALEGDDKYPV 230

Length = 237

>gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional

 Score =  109 bits (272), Expect = 5e-27
 Identities = 98/350 (28%), Positives = 156/350 (44%), Gaps = 26/350 (7%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
           M + YY IL+V K++ ++ +KKSYRKLA+K+HPD+N  D KEAE +FK I+EAY VLSD 
Sbjct: 1   MELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGD-KEAEEKFKLINEAYGVLSDE 59

Query: 61  QKRAIYDQYGEEGLKDMPPSSSS--------GYSYANGSGGNSKGFNPRNAEDIFAEFFG 112
           +KRA+YD+YG++GL     S S         G  + +  G  ++G + R    I  ++  
Sbjct: 60  KKRALYDRYGKKGLNQAGASQSDFSDFFEDLGSFFEDAFGFGARG-SKRQKSSIAPDYLQ 118

Query: 113 SSPFGFGSA--GPGKSTRFQSEG-----GGTFGGFGMGENIFRTYSDGSVPRKPPPVESK 165
           +    F  A  G  K+ + Q +       GT       E   +    G V  +   +   
Sbjct: 119 TIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDKALETCKQCNGQGQVFMRQGFMSFA 178

Query: 166 LPCSLEELYSGSTRKMKISRTVVDANGRQT--PESEILTIDVKPGWKKGTKITFPDKGNE 223
             C           K KI +T   A   +T   + E +   +  G     ++   +KGNE
Sbjct: 179 QTC------GACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKGNE 232

Query: 224 QPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVT 283
                  DL      K  + +KR+  DL +   V       G ++ + +L G +L + + 
Sbjct: 233 YEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIP 292

Query: 284 DIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKR 333
                        EG+    E   RG L ++ +V +P  L  EQ+  L++
Sbjct: 293 RNARDRQTFAFRNEGVK-HPESSYRGSLIVELQVIYPKSLNKEQQELLEK 341

Length = 369

>gnl|CDD|216569 pfam01556, DnaJ_C, DnaJ C terminal domain

 Score = 98.8 bits (247), Expect = 4e-26
 Identities = 36/80 (45%), Positives = 47/80 (58%)

Query: 250 DLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRG 309
           DL V   +SL EAL G +V + TLDGR + I +     PG +L I G+GMPI +    RG
Sbjct: 1   DLYVTLPISLKEALLGGTVEVPTLDGRKVKIKIPAGTQPGDKLRIKGKGMPINKGGNGRG 60

Query: 310 DLRIKFEVKFPTKLTPEQRA 329
           DL +   VK P KL+ EQ+ 
Sbjct: 61  DLIVTLNVKIPKKLSSEQKE 80

This family consists of the C terminal region form the DnaJ protein. Although the function of this region is unknown, it is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. Length = 81

>gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional

 Score =  104 bits (261), Expect = 7e-26
 Identities = 92/340 (27%), Positives = 146/340 (42%), Gaps = 62/340 (18%)

Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPD--KNPNDKKEAEARFKQISEAYEVLSDPQ 61
           DYY I+ V        +K +YR+LA K+HPD  K P+    AEARFK+++EA+EVLSD Q
Sbjct: 5   DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPD----AEARFKEVAEAWEVLSDEQ 60

Query: 62  KRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSA 121
           +RA YDQ  +       P  +  + + +G   N++ F+     DIF+  FG         
Sbjct: 61  RRAEYDQLWQH---RNDPQFNRQFQHGDGQSFNAEDFD-----DIFSSIFGQH------- 105

Query: 122 GPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPPVESKLPCSLEELYSGSTRKM 181
              + +R +                           +   +E ++   LEE  +   R +
Sbjct: 106 --ARQSRQRP------------------------AARGHDIEIEVAVFLEETLTEHKRTI 139

Query: 182 KISRTVVDANGRQTPE-SEILTIDVKPGWKKGTKITFPDKGNEQPNQLP-ADLVFVIDEK 239
             +  V +A G    E  + L + +  G   G +I    +G    N  P  DL  VI   
Sbjct: 140 SYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIA 199

Query: 240 PHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELG----IP 295
           PH ++     DL +   ++  EA  G  V++ TL      I +T  I PG + G    + 
Sbjct: 200 PHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKES---ILLT--IPPGSQAGQRLRVK 254

Query: 296 GEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL 335
           G+G+   ++    GDL    ++  P K   E+ A L + L
Sbjct: 255 GKGLVSKKQT---GDLYAVLKIVMPPK-PDEKTAALWQQL 290

Length = 306

>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain

 Score = 96.1 bits (240), Expect = 2e-25
 Identities = 36/56 (64%), Positives = 49/56 (87%), Gaps = 1/56 (1%)

Query: 4  DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSD 59
          DYY+IL V  +A+++++KK+YRKLA+K+HPDKNP D  EAE +FK+I+EAYEVLSD
Sbjct: 1  DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNP-DDPEAEEKFKEINEAYEVLSD 55

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification. Length = 55

>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional

 Score =  104 bits (261), Expect = 2e-25
 Identities = 89/366 (24%), Positives = 162/366 (44%), Gaps = 49/366 (13%)

Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
           DYY +L V+K A+E +++++YRKLA ++HPD   N   +A  +  +I+EA +VL D  KR
Sbjct: 5   DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDL--NKSPDAHDKMVEINEAADVLLDKDKR 62

Query: 64  AIYDQYGEEGLKDMPPSSSSGYSYANG------SGGNSKGFNPRNAEDIFAEFFGSSPFG 117
             YDQ+G           SSG+S   G      S   S GF+  +  +IF++FFGS+   
Sbjct: 63  KQYDQFGHAAF-----DGSSGFSSNFGDFEDLFSNMGSSGFS--SFTNIFSDFFGSNKSD 115

Query: 118 FGSAGPGKSTRFQSEGGGTFGG--FGMGE----NIFRTYS--DGSVPRKPPPVESKLPCS 169
           +      K      +   TF    FG+ +    ++    S   GS       +     C 
Sbjct: 116 Y--QRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICNNCH 173

Query: 170 LE--------------------ELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGW 209
                                  + +G+ + +K         G+     +I  +++  G 
Sbjct: 174 GTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKI-EVNIPKGI 232

Query: 210 KKGTKITFPDKGNEQ-PNQLPADLVFVIDEKPHDVYKR-DSNDLIVNHKVSLAEALGGTS 267
           +   +I    KG+    N +  DL+  I  K   V++  ++ND+++ + +S  +A+ G  
Sbjct: 233 RPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNE 292

Query: 268 VSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQ 327
           + + TLDG D+   +   I+    + I  +G+  +     RGDL IK  +  P  L+ ++
Sbjct: 293 IIIKTLDG-DIKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKE 351

Query: 328 RAGLKR 333
           +  +++
Sbjct: 352 KELIEQ 357

Length = 372

>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional

 Score = 99.3 bits (247), Expect = 2e-23
 Identities = 98/359 (27%), Positives = 156/359 (43%), Gaps = 50/359 (13%)

Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
           DYY +L V++NA+ D++KK+YRKLA K+HPD   N   +AE +FK++ EAY+ LSDPQK+
Sbjct: 5   DYYEVLGVDRNASVDEVKKAYRKLARKYHPDV--NKAPDAEDKFKEVKEAYDTLSDPQKK 62

Query: 64  AIYDQYGE----EGLKDMPPSSSSGYS-----YANGSGGNSKGFNPRNAEDIFAEFFGSS 114
           A YDQ+G     +G          G+S     +  G GG      PR   D+      + 
Sbjct: 63  AHYDQFGHTDPNQGFGGGGAGDFGGFSDIFDMFFGGGGGRRNPNAPRQGADLQY----TM 118

Query: 115 PFGFGSAGPGKSTRFQ---SEGGGTFGGFGMGENIFRTYSDGSVPRKPP--------PVE 163
              F  A  GK T  +    E  GT  G G           G+ P             VE
Sbjct: 119 TLEFKEAVFGKETEIEIPREETCGTCHGSGA--------KPGTKPETCSHCGGSGQLNVE 170

Query: 164 SKLP---------CSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTK 214
              P         C   E   G+ + +K         G+     +I  + V  G   G +
Sbjct: 171 QNTPFGRVVNRRVCHHCE---GTGKIIKQKCATCGGKGKVRKRKKI-NVKVPAGIDHGQQ 226

Query: 215 ITFPDKGNEQPNQLPA-DLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITL 273
           +    +G    N  P  DL  V + KPH+ ++RD +D+     ++  +   G  + + TL
Sbjct: 227 LRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTL 286

Query: 274 DGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLK 332
           +G+ + + +      G    + G+G+P     G +GD  ++  V  P  LT +++  ++
Sbjct: 287 NGK-VKLKIPAGTQTGTSFRLRGKGVPNVHGRG-QGDQHVQVRVVTPKNLTEKEKELMR 343

Length = 371

>gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional

 Score = 97.8 bits (243), Expect = 6e-23
 Identities = 56/133 (42%), Positives = 78/133 (58%), Gaps = 15/133 (11%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
           M  DYY IL V+K A++ DLKK+Y KLA ++HPD    D K+AE +FK+I+ AY+VL D 
Sbjct: 1   MSQDYYQILGVSKTASQADLKKAYLKLAKQYHPDT--TDAKDAEKKFKEINAAYDVLKDE 58

Query: 61  QKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGS 120
           QKRA YD++G +  +            + G GGN  GF+P +  DIF +FF  S F  G 
Sbjct: 59  QKRAAYDRFGHDAFQ---------NQQSRGGGGNHGGFHP-DINDIFGDFF--SDF-MGG 105

Query: 121 AGPGKSTRFQSEG 133
           +   + T  +  G
Sbjct: 106 SRRSRPTSSKVRG 118

Length = 372

>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ

 Score = 85.3 bits (212), Expect = 1e-18
 Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 3/137 (2%)

Query: 197 ESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPA-DLVFVIDEKPHDVYKRDSNDLIVNH 255
           E + +T+ +  G   G ++    KGN   N  P  DL  VI  KPH +++RD NDL +  
Sbjct: 214 ERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEV 273

Query: 256 KVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKF 315
            +S  +A+ G  + + TLDG D+ + +      G    + G+G+P  R  G RGDL +  
Sbjct: 274 PISFTQAILGGEIEVPTLDG-DVKLKIPAGTQSGTVFRLKGKGVPRLRGNG-RGDLLVTV 331

Query: 316 EVKFPTKLTPEQRAGLK 332
           +V+ P  L+ EQ+  L+
Sbjct: 332 KVETPKNLSKEQKELLE 348

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354

>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ

 Score = 81.8 bits (201), Expect = 5e-17
 Identities = 34/75 (45%), Positives = 55/75 (73%), Gaps = 2/75 (2%)

Query: 4  DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
          DYY +L ++++A E ++KK++RKLA K+HPD+N     +A + F +I+EA +VLS+P+KR
Sbjct: 3  DYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRN--KAPDAASIFAEINEANDVLSNPKKR 60

Query: 64 AIYDQYGEEGLKDMP 78
          A YD+YG +G+    
Sbjct: 61 ANYDKYGHDGVDRED 75

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility [Cellular processes, Chemotaxis and motility]. Length = 871

>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional

 Score = 75.5 bits (186), Expect = 3e-15
 Identities = 44/134 (32%), Positives = 64/134 (47%), Gaps = 2/134 (1%)

Query: 201 LTIDVKPGWKKGTKITFPDKGNEQPNQLPA-DLVFVIDEKPHDVYKRDSNDLIVNHKVSL 259
           +T+ +  G   G +I    +G   P   PA DL   + E+PHDV+ RD +DL     V +
Sbjct: 214 ITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPM 273

Query: 260 AEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKF 319
            +A  GT+V++  +      I +     PG  + + G GMP  R  G RGDL    EV  
Sbjct: 274 VDAALGTTVTVEAILDGPSEITIPPGTQPGSVITLRGRGMPHLRS-GGRGDLHAHVEVVV 332

Query: 320 PTKLTPEQRAGLKR 333
           PT+L  E    L+ 
Sbjct: 333 PTRLDHEDIELLRE 346

Length = 378

>gnl|CDD|227694 COG5407, SEC63, Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

 Score = 69.6 bits (170), Expect = 5e-13
 Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 7/87 (8%)

Query: 2   GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPN----DKKEAEARFKQISEAYEVL 57
           G D Y IL ++++ +E D+KK YR L+MK+HPDK P      + E E ++K I++AY +L
Sbjct: 97  GFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLL 156

Query: 58  SDPQKRAIYDQYGEEGLKDMPPSSSSG 84
           +D ++R  Y  YG     D P  +S G
Sbjct: 157 TDKKRRENYLNYGT---PDSPQHTSEG 180

Length = 610

>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional

 Score = 67.9 bits (166), Expect = 1e-12
 Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 2/132 (1%)

Query: 202 TIDVKPGWKKGTKITFPDKGNEQPNQLP-ADLVFVIDEKPHDVYKRDSNDLIVNHKVSLA 260
           T+ +  G + GT +     GN      P  DL  ++  +P   +KR  +DLI +  +   
Sbjct: 228 TVKIPAGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYL 287

Query: 261 EALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFP 320
           +A+ GT+V +   +G    + +     P     + G+G+P  R  G RGDL +   V+ P
Sbjct: 288 QAILGTTVEVPLPEGGTTMLKIPPGTQPETVFRLKGKGLPNMRY-GRRGDLIVNVHVEIP 346

Query: 321 TKLTPEQRAGLK 332
            +L+ E+R  LK
Sbjct: 347 KRLSREERKLLK 358

Length = 369

>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional

 Score = 66.0 bits (161), Expect = 4e-12
 Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 3/134 (2%)

Query: 199 EILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKV 257
           E++T+ +  G  +G +++   KGN      +  DL+ VI+E+PH    RD NDLI N  +
Sbjct: 227 EVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLL 286

Query: 258 SLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEV 317
           S+  A  G +V + T+DG+   + +     PG  L +  +G+P     G  GDL +   V
Sbjct: 287 SVPTAALGGAVEVPTIDGK-AKVKIEAGTQPGKVLRLRNKGLPSVNGYG-TGDLLVNVSV 344

Query: 318 KFPTKLTPEQRAGL 331
             P  L+ E++  L
Sbjct: 345 YIPETLSKEEKQTL 358

Length = 386

>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional

 Score = 62.9 bits (153), Expect = 5e-11
 Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 6/144 (4%)

Query: 191 NGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPA-DLVFVIDEKPHDVYKRDSN 249
            GR    S+ + + +  G   G+++    +G       P  DL   +  +PH+ ++RD N
Sbjct: 206 QGR-VRVSKTVQVKIPAGVDTGSRLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGN 264

Query: 250 DLIVNHKVSLAEALGGTSVSLITLDG-RDLNIAVTDIISPGFELGIPGEGMPIAREPGNR 308
           D+     +S  +A  G  + + TL+G R+L I       PG      G+G+P  R  G R
Sbjct: 265 DVHCKVPISFVQAALGAQIEVPTLEGERELKIPKG--TQPGDIFRFKGKGIPSLRG-GGR 321

Query: 309 GDLRIKFEVKFPTKLTPEQRAGLK 332
           GD  I+ EVK PT+LT +Q   L 
Sbjct: 322 GDQIIEVEVKVPTRLTKKQEELLT 345

Length = 366

>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional

 Score = 61.3 bits (150), Expect = 1e-10
 Identities = 44/135 (32%), Positives = 64/135 (47%), Gaps = 7/135 (5%)

Query: 202 TIDVK--PGWKKGTKITFPDKGNEQPNQLPA-DLVFVIDEKPHDVYKRDSNDLIVNHKVS 258
           T+ VK   G   G +I    +G       PA DL   I  K H +++RD NDL     +S
Sbjct: 212 TLSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPIS 271

Query: 259 LAEA-LGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEV 317
              A LGG  + + TLDGR + + + +    G    + G+G+   R  G RGDL  +  V
Sbjct: 272 FTTAALGGE-IEVPTLDGR-VKLKIPEGTQTGKLFRLRGKGVKSVRS-GARGDLYCQVVV 328

Query: 318 KFPTKLTPEQRAGLK 332
           + P  LT  Q+  L+
Sbjct: 329 ETPVNLTKRQKELLE 343

Length = 371

>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional

 Score = 58.7 bits (142), Expect = 1e-09
 Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 3/133 (2%)

Query: 201 LTIDVKPGWKKGTKITFPDKGNEQPNQLP-ADLVFVIDEKPHDVYKRDSNDLIVNHKVSL 259
           + +++  G   G  IT   +G       P  DL  VI  KPH ++KR+  ++ +   ++ 
Sbjct: 230 IKVNIPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITF 289

Query: 260 AEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKF 319
            +A  G  + + TLDG+ +   + +    G +  + G+G+P  R  G RGD  +K  ++ 
Sbjct: 290 TDAALGGEIEIPTLDGK-VKFTIPEGTQTGTKFRLRGKGIPHLRGRG-RGDQIVKVYIEV 347

Query: 320 PTKLTPEQRAGLK 332
           P KLT +Q+  L+
Sbjct: 348 PKKLTEKQKELLR 360

Length = 386

>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional

 Score = 57.5 bits (139), Expect = 2e-09
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 3/133 (2%)

Query: 203 IDVKPGWKKGTKITFPDKGNEQPNQLPA-DLVFVIDEKPHDVYKRDSNDLIVNHKVSLAE 261
           + +  G   G ++     G+   N  PA DL   ID +PH V++R  +DLI+   +   +
Sbjct: 231 VHIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVD 290

Query: 262 ALGGTSVSLITL-DGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFP 320
           A  G    + TL       + + + I  G  L + G+G P     G RGDL ++  V+ P
Sbjct: 291 AALGMKKEIPTLLKEGTCRLTIPEGIQSGTILKVRGQGFPNVHGKG-RGDLLVRISVETP 349

Query: 321 TKLTPEQRAGLKR 333
             L+ EQ+  L++
Sbjct: 350 QNLSEEQKELLRQ 362

Length = 391

>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional

 Score = 56.5 bits (137), Expect = 5e-09
 Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 6/136 (4%)

Query: 201 LTIDVKPGWKKGTKITFPDKGNEQPNQLPA-DLVFVIDEKPHDVYKRDSNDLIVNHKVSL 259
           L I++  G   GT++    +G+      P  DL   +  K    ++RD  +++   K+S 
Sbjct: 218 LKINIPAGVDTGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISY 277

Query: 260 AEALGGTSVSLITLDGR-DLNI-AVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEV 317
            +A+ G ++ + T+DG  +L I A T    P   L +  +G+P    P  RGD  I  +V
Sbjct: 278 LQAILGDTLEVDTVDGPVELTIPAGT---QPNTVLTLENKGVPRLGNPVARGDHLITVKV 334

Query: 318 KFPTKLTPEQRAGLKR 333
           K PT+++ E+R  L++
Sbjct: 335 KIPTRISDEERELLEK 350

Length = 374

>gnl|CDD|173534 PTZ00341, PTZ00341, Ring-infected erythrocyte surface antigen; Provisional

 Score = 57.5 bits (138), Expect = 5e-09
 Identities = 26/71 (36%), Positives = 46/71 (64%), Gaps = 2/71 (2%)

Query: 5   YYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRA 64
           +Y+IL V  NA   ++ + Y KLA  ++P K   +  E   +FK+I+EAY++L D  K+ 
Sbjct: 575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGN--EGFHKFKKINEAYQILGDIDKKK 632

Query: 65  IYDQYGEEGLK 75
           +Y+++G +G+K
Sbjct: 633 MYNKFGYDGIK 643

Length = 1136

>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional

 Score = 54.4 bits (131), Expect = 3e-08
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 6/101 (5%)

Query: 229 PADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISP 288
           P DL  VI  +   +++R   DL+V  ++S  +A  G  + + TLD   + + +      
Sbjct: 244 PGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDD-PVTLDIPKGTQS 302

Query: 289 GFELGIPGEGMPIAREPGN--RGDLRIKFEVKFPTKLTPEQ 327
           G    + G+G+P     G+  +GDL ++  V  PTKLT  Q
Sbjct: 303 GEVFRLRGKGLPY---LGSSQKGDLLVEVSVVTPTKLTKRQ 340

Length = 373

>gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional

 Score = 47.7 bits (113), Expect = 4e-06
 Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 2/129 (1%)

Query: 201 LTIDVKPGWKKGTKITFPDKGNEQ-PNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSL 259
           L++++  G + GT+I    +G          DL   I  KPHD+YK D  +L     +S 
Sbjct: 216 LSVNIPAGVENGTRIRHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISF 275

Query: 260 AEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKF 319
             A  G  + +  ++G  +N+ +      G +L +  +GM   R    RGD+     V+ 
Sbjct: 276 VNAALGGEIEVPVIEGGKVNLTIPAGTQNGDQLRLRSKGMSKMRST-IRGDMLTHIHVEV 334

Query: 320 PTKLTPEQR 328
           P  L+  QR
Sbjct: 335 PKNLSKRQR 343

Length = 372

>gnl|CDD|227594 COG5269, ZUO1, Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

 Score = 46.9 bits (111), Expect = 7e-06
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 6/83 (7%)

Query: 4   DYYNILKVNK---NATEDDLKKSYRKLAMKWHPDKNP-NDKKEAEARFKQISEAYEVLSD 59
           D Y +L ++K    A    + K+++K   K+HPDK      K  +  FK I +A EVL D
Sbjct: 44  DLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGD 103

Query: 60  PQKRAIYDQYGEEGLKDMPPSSS 82
            + R  YD    +   D+PP   
Sbjct: 104 RKLRLQYDSNDFD--ADVPPPRI 124

Length = 379

>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional

 Score = 45.3 bits (107), Expect = 2e-05
 Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 3/131 (2%)

Query: 198 SEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKV 257
           +E +++ +  G     ++    KG         DL  V+        +R ++DL V+ K+
Sbjct: 220 NEDISVKIPKGATDNLRLRVKGKGQSY-GGRTGDLYVVLRVNNDPNIQRINDDLYVDQKI 278

Query: 258 SLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEV 317
           +  +A  G  +  I L     N+ + +   PG  L I G GMP     G+ GDL ++  V
Sbjct: 279 NFPQAALGGEIE-IKLFREKYNLKIPEGTQPGEVLKIKGAGMPHLNGHGS-GDLLVRINV 336

Query: 318 KFPTKLTPEQR 328
           + P +LT +Q+
Sbjct: 337 EVPKRLTSKQK 347

Length = 365

>gnl|CDD|224002 COG1076, DjlA, DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 6/70 (8%)

Query: 3  MDYYNILKVNKNATEDD--LKKSYRKLAMKWHPDKNPN----DKKEAEARFKQISEAYEV 56
           D + +  + +    D   LK  YR+L   +HPD+       ++++A  +  +++ AY+ 
Sbjct: 1  SDGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQT 60

Query: 57 LSDPQKRAIY 66
          L DP  RA Y
Sbjct: 61 LKDPLLRAEY 70

Length = 174

>gnl|CDD|236512 PRK09430, djlA, Dna-J like membrane chaperone protein; Provisional

 Score = 42.5 bits (101), Expect = 1e-04
 Identities = 20/60 (33%), Positives = 37/60 (61%), Gaps = 6/60 (10%)

Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPDK-----NPNDKKE-AEARFKQISEAYEVL 57
           D Y +L V+++  + ++K++YRKL  + HPDK      P +  E A+ + ++I  AYE++
Sbjct: 201 DAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELI 260

Length = 267

>gnl|CDD|211601 TIGR00714, hscB, Fe-S protein assembly co-chaperone HscB

 Score = 40.3 bits (94), Expect = 3e-04
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 2/49 (4%)

Query: 20 LKKSYRKLAMKWHPD--KNPNDKKEAEARFKQISEAYEVLSDPQKRAIY 66
          L+K YR+L  ++HPD      ++  A  +   +++AY  L DP +RA Y
Sbjct: 8  LRKRYRQLQAQYHPDASGMAQEQLAASQQSTTLNQAYHTLKDPLRRAEY 56

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock [Protein fate, Protein folding and stabilization]. Length = 155

>gnl|CDD|224002 COG1076, DjlA, DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 6/58 (10%)

Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPDK--NPNDK----KEAEARFKQISEAYE 55
           D   +L V   A +D +KK+YRKL  + HPDK      K    ++ + + ++I EAYE
Sbjct: 114 DALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYE 171

Length = 174

>gnl|CDD|235133 PRK03578, hscB, co-chaperone HscB; Provisional

 Score = 39.6 bits (93), Expect = 7e-04
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 6/55 (10%)

Query: 17 EDDLKKSYRKLAMKWHPDKNPNDKKEAEARFK-----QISEAYEVLSDPQKRAIY 66
          E  L  +YR +  + HPD+      +AE R       + +EAY+ L DP KRA Y
Sbjct: 22 EAALDAAYRTVQAQVHPDRFAA-AGDAEKRVAMQWATRANEAYQTLRDPLKRARY 75

Length = 176

>gnl|CDD|166894 PRK00294, hscB, co-chaperone HscB; Provisional

 Score = 38.7 bits (90), Expect = 0.001
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 6/54 (11%)

Query: 18 DDLKKSYRKLAMKWHPDKNPNDKKEAEARFK-----QISEAYEVLSDPQKRAIY 66
          D L   YR+LA + HPD+   D  E E R        ++EAY+ L  P +RA Y
Sbjct: 21 DQLATRYRELAREVHPDRFA-DAPEREQRLALERSASLNEAYQTLKSPPRRARY 73

Length = 173

>gnl|CDD|222912 PHA02624, PHA02624, large T antigen; Provisional

 Score = 40.0 bits (94), Expect = 0.001
 Identities = 28/163 (17%), Positives = 56/163 (34%), Gaps = 29/163 (17%)

Query: 16  TEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLK 75
               ++K+Y +   ++HPDK  +     E + K+++  Y+ L +   ++    +G +   
Sbjct: 26  NLPLMRKAYLRKCKEYHPDKGGD-----EEKMKRLNSLYKKLQE-GVKSARQSFGTQDSS 79

Query: 76  DMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFA-EFFGSSPFGFGSAGPGKSTRFQSEGG 134
           ++P   +  +            FN +  ED+F  E   SS        P      + E  
Sbjct: 80  EIPTYGTPEWEQWWEE------FNEKWDEDLFCDEELSSSDDEDEPPPPSPPPSQEEESQ 133

Query: 135 GTFGGFGMGENIFRTYSDGSVPRKPPPVES--KLPCSLEELYS 175
            +              S  + P+K     +    P  L    S
Sbjct: 134 SS--------------SQATPPKKKKKNPAPNDFPSCLLAFLS 162

Length = 647

>gnl|CDD|179914 PRK05014, hscB, co-chaperone HscB; Provisional

 Score = 37.6 bits (88), Expect = 0.003
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 4/51 (7%)

Query: 20 LKKSYRKLAMKWHPDKNPN----DKKEAEARFKQISEAYEVLSDPQKRAIY 66
          L   Y++L  ++HPDK  N    ++  A  +   I++AY+ L  P KRA Y
Sbjct: 20 LASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEY 70

Length = 171

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	337
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	100.0
PRK14288	369	chaperone protein DnaJ; Provisional	100.0
PRK14296	372	chaperone protein DnaJ; Provisional	100.0
PRK14286	372	chaperone protein DnaJ; Provisional	100.0
PTZ00037	421	DnaJ_C chaperone protein; Provisional	100.0
PRK14285	365	chaperone protein DnaJ; Provisional	100.0
PRK14278	378	chaperone protein DnaJ; Provisional	100.0
PRK14279	392	chaperone protein DnaJ; Provisional	100.0
PRK14277	386	chaperone protein DnaJ; Provisional	100.0
PRK14276	380	chaperone protein DnaJ; Provisional	100.0
PRK14280	376	chaperone protein DnaJ; Provisional	100.0
PRK14297	380	chaperone protein DnaJ; Provisional	100.0
PRK14287	371	chaperone protein DnaJ; Provisional	100.0
PRK14298	377	chaperone protein DnaJ; Provisional	100.0
PRK14295	389	chaperone protein DnaJ; Provisional	100.0
PRK14301	373	chaperone protein DnaJ; Provisional	100.0
PRK14281	397	chaperone protein DnaJ; Provisional	100.0
PRK14282	369	chaperone protein DnaJ; Provisional	100.0
PRK14284	391	chaperone protein DnaJ; Provisional	100.0
PRK14294	366	chaperone protein DnaJ; Provisional	100.0
PRK14291	382	chaperone protein DnaJ; Provisional	100.0
PRK14299	291	chaperone protein DnaJ; Provisional	100.0
PRK14290	365	chaperone protein DnaJ; Provisional	100.0
PRK14300	372	chaperone protein DnaJ; Provisional	100.0
PRK10767	371	chaperone protein DnaJ; Provisional	100.0
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	100.0
PRK10266	306	curved DNA-binding protein CbpA; Provisional	100.0
PRK14283	378	chaperone protein DnaJ; Provisional	100.0
PRK14293	374	chaperone protein DnaJ; Provisional	100.0
PRK14292	371	chaperone protein DnaJ; Provisional	100.0
PRK14289	386	chaperone protein DnaJ; Provisional	100.0
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	100.0
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	100.0
KOG0713	336	consensus Molecular chaperone (DnaJ superfamily) [	100.0
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	99.96
KOG0714	306	consensus Molecular chaperone (DnaJ superfamily) [	99.95
PF01556	81	CTDII: DnaJ C terminal domain; InterPro: IPR002939	99.88
KOG0716	279	consensus Molecular chaperone (DnaJ superfamily) [	99.82
COG2214	237	CbpA DnaJ-class molecular chaperone [Posttranslati	99.81
KOG0717	508	consensus Molecular chaperone (DnaJ superfamily) [	99.8
KOG0691	296	consensus Molecular chaperone (DnaJ superfamily) [	99.8
KOG0718	546	consensus Molecular chaperone (DnaJ superfamily) [	99.79
PTZ00341	1136	Ring-infected erythrocyte surface antigen; Provisi	99.79
PF00226	64	DnaJ: DnaJ domain; InterPro: IPR001623 The prokary	99.76
KOG0719	264	consensus Molecular chaperone (DnaJ superfamily) [	99.74
KOG0624	504	consensus dsRNA-activated protein kinase inhibitor	99.71
PHA03102	153	Small T antigen; Reviewed	99.7
smart00271	60	DnaJ DnaJ molecular chaperone homology domain.	99.68
KOG0721	230	consensus Molecular chaperone (DnaJ superfamily) [	99.65
cd06257	55	DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho	99.64
PRK01356	166	hscB co-chaperone HscB; Provisional	99.54
KOG0550	486	consensus Molecular chaperone (DnaJ superfamily) [	99.54
PRK05014	171	hscB co-chaperone HscB; Provisional	99.53
KOG0722	329	consensus Molecular chaperone (DnaJ superfamily) [	99.48
PRK03578	176	hscB co-chaperone HscB; Provisional	99.46
PRK00294	173	hscB co-chaperone HscB; Provisional	99.45
KOG0720	490	consensus Molecular chaperone (DnaJ superfamily) [	99.35
PTZ00100	116	DnaJ chaperone protein; Provisional	99.35
PRK09430	267	djlA Dna-J like membrane chaperone protein; Provis	99.29
PHA02624	647	large T antigen; Provisional	99.25
PF01556	81	CTDII: DnaJ C terminal domain; InterPro: IPR002939	99.23
COG5407	610	SEC63 Preprotein translocase subunit Sec63 [Intrac	99.22
PRK14282	369	chaperone protein DnaJ; Provisional	99.17
PRK01773	173	hscB co-chaperone HscB; Provisional	99.14
PRK14294	366	chaperone protein DnaJ; Provisional	99.09
PRK14299	291	chaperone protein DnaJ; Provisional	99.09
PRK14285	365	chaperone protein DnaJ; Provisional	99.07
PRK14290	365	chaperone protein DnaJ; Provisional	99.07
TIGR00714	157	hscB Fe-S protein assembly co-chaperone HscB. This	99.06
PRK10767	371	chaperone protein DnaJ; Provisional	99.03
PRK14298	377	chaperone protein DnaJ; Provisional	99.03
PRK14284	391	chaperone protein DnaJ; Provisional	99.02
PRK14279	392	chaperone protein DnaJ; Provisional	99.0
PRK14287	371	chaperone protein DnaJ; Provisional	99.0
PRK14301	373	chaperone protein DnaJ; Provisional	98.99
PRK14288	369	chaperone protein DnaJ; Provisional	98.99
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	98.98
PRK14300	372	chaperone protein DnaJ; Provisional	98.98
PRK14295	389	chaperone protein DnaJ; Provisional	98.98
KOG1150	250	consensus Predicted molecular chaperone (DnaJ supe	98.95
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	98.94
PRK14286	372	chaperone protein DnaJ; Provisional	98.93
PRK14293	374	chaperone protein DnaJ; Provisional	98.92
PRK10266	306	curved DNA-binding protein CbpA; Provisional	98.92
PRK14276	380	chaperone protein DnaJ; Provisional	98.91
PRK14280	376	chaperone protein DnaJ; Provisional	98.9
PRK14281	397	chaperone protein DnaJ; Provisional	98.89
PRK14291	382	chaperone protein DnaJ; Provisional	98.88
PRK14297	380	chaperone protein DnaJ; Provisional	98.86
PRK14278	378	chaperone protein DnaJ; Provisional	98.85
PRK14296	372	chaperone protein DnaJ; Provisional	98.84
PRK14292	371	chaperone protein DnaJ; Provisional	98.83
PRK14277	386	chaperone protein DnaJ; Provisional	98.83
PTZ00037	421	DnaJ_C chaperone protein; Provisional	98.8
PRK14283	378	chaperone protein DnaJ; Provisional	98.8
COG5269	379	ZUO1 Ribosome-associated chaperone zuotin [Transla	98.76
PRK14289	386	chaperone protein DnaJ; Provisional	98.74
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	98.64
KOG1789	2235	consensus Endocytosis protein RME-8, contains DnaJ	98.46
KOG0568	342	consensus Molecular chaperone (DnaJ superfamily) [	98.43
KOG0723	112	consensus Molecular chaperone (DnaJ superfamily) [	98.0
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	97.69
KOG3192	168	consensus Mitochondrial J-type chaperone [Posttran	97.04
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	96.36
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	96.13
KOG0431	453	consensus Auxilin-like protein and related protein	94.51
PF03656	127	Pam16: Pam16; InterPro: IPR005341 The Pam16 protei	91.91
PF13446	62	RPT: A repeated domain in UCH-protein	88.63
TIGR02642	186	phage_xxxx uncharacterized phage protein. This unc	86.21
KOG0724	335	consensus Zuotin and related molecular chaperones	83.67
PF11833	194	DUF3353: Protein of unknown function (DUF3353); In	80.17
PF14687	112	DUF4460: Domain of unknown function (DUF4460)	80.02

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=5.6e-76  Score=551.97  Aligned_cols=289  Identities=37%  Similarity=0.669  Sum_probs=250.3

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662            1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS   80 (337)
Q Consensus         1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~   80 (337)
                      |.+|||+||||+++||.+|||+|||+||+|||||+||.+ ++|+++|++|++||||||||+||++||+||+++++++.  
T Consensus         2 ~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~-~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg--   78 (371)
T COG0484           2 AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGD-KEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGG--   78 (371)
T ss_pred             CccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-HHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCC--
Confidence            579999999999999999999999999999999999965 68999999999999999999999999999999987321  


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCC
Q 019662           81 SSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP  160 (337)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (337)
                          +++|   +++  +|.+ ++.|||++|||++.++  .                              ++...++++.
T Consensus        79 ----~gg~---g~~--~fgg-~~~DIF~~~FgGg~~~--~------------------------------~~~~~~~rG~  116 (371)
T COG0484          79 ----FGGF---GFG--GFGG-DFGDIFEDFFGGGGGG--R------------------------------RRPNRPRRGA  116 (371)
T ss_pred             ----cCCC---CcC--CCCC-CHHHHHHHhhcCCCcc--c------------------------------CCCCCcccCC
Confidence                1111   111  2322 7899999999732110  0                              0022467899


Q ss_pred             CeeeeeeechhhheeCceEEEEEEEEEE----cCC-----------------Ce--------------------------
Q 019662          161 PVESKLPCSLEELYSGSTRKMKISRTVV----DAN-----------------GR--------------------------  193 (337)
Q Consensus       161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g~-----------------G~--------------------------  193 (337)
                      |+.+.++|||+||+.|+++.|.+.+...    +|+                 |.                          
T Consensus       117 Dl~~~l~isleEa~~G~~~~i~~~~~~~C~~C~GsGak~gt~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~i  196 (371)
T COG0484         117 DLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKII  196 (371)
T ss_pred             ceEEEEEeEhhhhccCceeeEecceeeECCcCCCCCCCCCCCCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeEC
Confidence            9999999999999999999998876532    222                 10                          


Q ss_pred             -----------eeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeCCCccccCCCceEEEEeeCHHH
Q 019662          194 -----------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAE  261 (337)
Q Consensus       194 -----------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~e  261 (337)
                                 .+.+.++++|+||||+.+|++|+++|+|++++ ++++|||||+|.|++|+.|.|+|+||+++++||+.+
T Consensus       197 ~~pC~~C~G~G~v~~~~~i~V~IPaGv~~g~~ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~  276 (371)
T COG0484         197 KDPCGKCKGKGRVKKKKSISVNIPAGVDDGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTE  276 (371)
T ss_pred             CCCCCCCCCCCeEeeeeEEEEECCCCCccCCEEEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHH
Confidence                       57788999999999999999999999999986 667899999999999999999999999999999999


Q ss_pred             HhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662          262 ALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG  336 (337)
Q Consensus       262 Al~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~  336 (337)
                      |++|+++.|+||+|+ ++|+||+++++|+++||+|+|||..+ +..+|||||+|+|++|++|+.+|+++|+++..
T Consensus       277 AalG~~i~vptl~g~-~~l~ip~Gtq~G~~~rl~gkG~p~~~-~~~~GDl~v~v~v~~P~~ls~~q~~lL~~~~~  349 (371)
T COG0484         277 AALGGEIEVPTLDGR-VKLKIPAGTQTGEVFRLRGKGMPKLR-SGGRGDLYVRVKVETPKNLSDEQKELLEEFAK  349 (371)
T ss_pred             HhcCCEEEEEecCCC-EEEecCCCCccCcEEEEcCCCccccC-CCCcCCEEEEEEEEcCCCCCHHHHHHHHHHHH
Confidence            999999999999998 99999999999999999999999876 45679999999999999999999999999875

>PRK14288 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.6e-69  Score=517.55  Aligned_cols=289  Identities=30%  Similarity=0.509  Sum_probs=242.1

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662            1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS   80 (337)
Q Consensus         1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~   80 (337)
                      |++|||+||||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||+||+||.||++||+||++++..+.  
T Consensus         1 ~~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~-~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~~--   77 (369)
T PRK14288          1 MELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGD-KEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAG--   77 (369)
T ss_pred             CCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc-cHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccCC--
Confidence            889999999999999999999999999999999999865 46899999999999999999999999999998765311  


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCC
Q 019662           81 SSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP  160 (337)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (337)
                       + +.++|.     . .|  .++.++|+.|||++     +.                     + .   .   ...++++.
T Consensus        78 -~-~~~~~~-----~-~f--~~~~~~F~~~fg~g-----~~---------------------~-~---~---~~~~~~g~  114 (369)
T PRK14288         78 -A-SQSDFS-----D-FF--EDLGSFFEDAFGFG-----AR---------------------G-S---K---RQKSSIAP  114 (369)
T ss_pred             -C-Cccccc-----c-ch--hhHHHHHHhhcCCC-----Cc---------------------c-c---C---cCCCCCCC
Confidence             0 000010     0 01  13445666666521     00                     0 0   0   11235688


Q ss_pred             CeeeeeeechhhheeCceEEEEEEEEEE----cCC--------------------------------------C------
Q 019662          161 PVESKLPCSLEELYSGSTRKMKISRTVV----DAN--------------------------------------G------  192 (337)
Q Consensus       161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g~--------------------------------------G------  192 (337)
                      |+.+.+.|||+|+|+|+++++.+.+.+.    +|+                                      |      
T Consensus       115 di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~  194 (369)
T PRK14288        115 DYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDKALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKIIKTP  194 (369)
T ss_pred             CeeEeccccHHHHhCCeEEEEEEEeeccCCCCCCcccCCCCCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceEcccc
Confidence            9999999999999999999998875421    111                                      1      


Q ss_pred             -------eeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEEEEeeCCCccccCCCceEEEEeeCHHHHhCC
Q 019662          193 -------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGG  265 (337)
Q Consensus       193 -------~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~eAl~G  265 (337)
                             .++.+.++++|.||||+++|++|+|+|+|++.+++.+|||+|+|++++|+.|+|+|+||+++++|||.|||+|
T Consensus       195 C~~C~G~g~v~~~~~l~V~IP~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG  274 (369)
T PRK14288        195 CQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKGNEYEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALG  274 (369)
T ss_pred             CccCCCcceEEEEEEEEEecCCCCCCCCEEEEccCccCCCCCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcC
Confidence                   1456678999999999999999999999999888889999999999999999999999999999999999999


Q ss_pred             cEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662          266 TSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG  336 (337)
Q Consensus       266 ~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~  336 (337)
                      +++.|+||||+.++|+||+++++|++++|+|+|||..+ +..+|||||+|+|.+|+.|+++|+++|+++|+
T Consensus       275 ~~i~v~tLdG~~l~i~i~~~~~~g~~~~i~g~G~p~~~-~~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~  344 (369)
T PRK14288        275 HTIKVPSLKGDELELKIPRNARDRQTFAFRNEGVKHPE-SSYRGSLIVELQVIYPKSLNKEQQELLEKLHA  344 (369)
T ss_pred             CEEEeecCCCCEEEEEeCCCCCCCcEEEEcCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            99999999998899999999999999999999999765 34689999999999999999999999999984

>PRK14296 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.4e-68  Score=514.31  Aligned_cols=294  Identities=27%  Similarity=0.452  Sum_probs=240.6

Q ss_pred             CC-CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCC
Q 019662            1 MG-MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPP   79 (337)
Q Consensus         1 m~-~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~   79 (337)
                      |. +|||+||||+++||.+|||+|||+||++||||+|++  +.|+++|++|++||+|||||+||+.||+||++++..+..
T Consensus         1 m~~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~--~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~~   78 (372)
T PRK14296          1 MKKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKS--PDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSG   78 (372)
T ss_pred             CCCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--chHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCCC
Confidence            63 799999999999999999999999999999999985  468999999999999999999999999999987753210


Q ss_pred             CCCCCCCCCCCCCCCCC---CCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCC
Q 019662           80 SSSSGYSYANGSGGNSK---GFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVP  156 (337)
Q Consensus        80 ~~~~~~~~~~~~~~~~~---~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (337)
                      . ++++++|.. .+..+   .|  .++.|+|++|||++.    .                      .         ...+
T Consensus        79 ~-~~~~~~~~~-~~~~~~~~g~--~~f~d~f~~~fggg~----~----------------------~---------~~~~  119 (372)
T PRK14296         79 F-SSNFGDFED-LFSNMGSSGF--SSFTNIFSDFFGSNK----S----------------------D---------YQRS  119 (372)
T ss_pred             c-CcCCCcccc-cccccccccc--ccchhhhhhhcCCCc----c----------------------C---------CCCc
Confidence            0 011111110 00000   11  245678888876310    0                      0         0123


Q ss_pred             CCCCCeeeeeeechhhheeCceEEEEEEEEEE---------------------cCCCe----------------------
Q 019662          157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVV---------------------DANGR----------------------  193 (337)
Q Consensus       157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~---------------------~g~G~----------------------  193 (337)
                      +++.|+.+.+.|||+|+|+|++++|.+.+.+.                     +|.|.                      
T Consensus       120 ~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~  199 (372)
T PRK14296        120 TKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCN  199 (372)
T ss_pred             CCCCCeEEEeeccHHHhhCCeeEEEEEeeeeccCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcC
Confidence            56889999999999999999999998865421                     11111                      


Q ss_pred             -----------------eeecceEEEEEeCCCCcCCCEEEECCCCCCC-CCCCCccEEEEEEeeCCCccccC-CCceEEE
Q 019662          194 -----------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQ-PNQLPADLVFVIDEKPHDVYKRD-SNDLIVN  254 (337)
Q Consensus       194 -----------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~-~~~~~GDL~v~i~v~~~~~f~r~-g~dL~~~  254 (337)
                                       ++.+.++++|.||||+++|++|+|+|+|++. +++.+|||+|+|++++|+.|+|+ |+||+++
T Consensus       200 G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~  279 (372)
T PRK14296        200 GAGKIIKNKCKNCKGKGKYLERKKIEVNIPKGIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMT  279 (372)
T ss_pred             CcceeecccccCCCCceEEEEEEEEEEEECCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEE
Confidence                             2455679999999999999999999999987 56779999999999999999995 8999999


Q ss_pred             EeeCHHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHH
Q 019662          255 HKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRA  334 (337)
Q Consensus       255 ~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~  334 (337)
                      ++|||+|||+|+++.|+||||+ ++|+||+++++|++++|+|+|||...+++.+|||||+|+|.||+.|+++|+++|+++
T Consensus       280 ~~Isl~eAllG~~~~i~tldG~-~~v~ip~~t~~g~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~l  358 (372)
T PRK14296        280 YNISYLDAILGNEIIIKTLDGD-IKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKEKELIEQI  358 (372)
T ss_pred             EecCHHHHhCCCEEEeeCCCCC-EEEEECCccCCCcEEEEcCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            9999999999999999999998 999999999999999999999996544457899999999999999999999999998


Q ss_pred             hC
Q 019662          335 LG  336 (337)
Q Consensus       335 l~  336 (337)
                      +.
T Consensus       359 ~~  360 (372)
T PRK14296        359 YE  360 (372)
T ss_pred             Hh
Confidence            74

>PRK14286 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.5e-66  Score=500.71  Aligned_cols=296  Identities=33%  Similarity=0.594  Sum_probs=244.4

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662            1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS   80 (337)
Q Consensus         1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~   80 (337)
                      -.+|||+||||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||+||+||.+|++||+||++++..+.. 
T Consensus         2 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~-   79 (372)
T PRK14286          2 SERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGN-KESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAG-   79 (372)
T ss_pred             CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-hHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhccccC-
Confidence            048999999999999999999999999999999999865 468999999999999999999999999999988753211 


Q ss_pred             CCCCCCCCCCCCCCCCC--CCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCC
Q 019662           81 SSSGYSYANGSGGNSKG--FNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRK  158 (337)
Q Consensus        81 ~~~~~~~~~~~~~~~~~--~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (337)
                       +.+.++++     ++.  |  .++.|+|++|||++. +  +.                .    ..+      ....+++
T Consensus        80 -~~~~~~~~-----~~~~~~--~~~~d~f~~ffgg~~-~--~~----------------~----~~~------~~~~~~~  122 (372)
T PRK14286         80 -GFGQGAYT-----DFSDIF--GDFGDIFGDFFGGGR-G--GG----------------S----GGG------RRSGPQR  122 (372)
T ss_pred             -CCCCCCcc-----cccccc--cchhhHHHHhhCCCc-c--CC----------------C----ccc------ccCCCCC
Confidence             00000010     111  2  257799999997411 0  00                0    000      0112357


Q ss_pred             CCCeeeeeeechhhheeCceEEEEEEEEEE----cCCC---------------------------------------e--
Q 019662          159 PPPVESKLPCSLEELYSGSTRKMKISRTVV----DANG---------------------------------------R--  193 (337)
Q Consensus       159 ~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g~G---------------------------------------~--  193 (337)
                      +.|+.+.+.|||+|+|+|+++++.+.+.+.    +|+|                                       +  
T Consensus       123 g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~  202 (372)
T PRK14286        123 GSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVI  202 (372)
T ss_pred             CCCeeEEEEEEHHHHhCCeeEEEEeeccccCCCCcCCCcCCCCCCccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeEe
Confidence            899999999999999999999998875431    1111                                       0  


Q ss_pred             -----------eeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEEEEeeCCCccccCCCceEEEEeeCHHH
Q 019662          194 -----------QTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAE  261 (337)
Q Consensus       194 -----------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~e  261 (337)
                                 ++.+.++++|.||||+++|++|+|+|+|++.++ ..+|||||+|++++|+.|+|+|+||+++++|||++
T Consensus       203 ~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~e  282 (372)
T PRK14286        203 SNPCKTCGGQGLQEKRRTINIKIPPGVETGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQ  282 (372)
T ss_pred             cccCCCCCCCcEEecceEEEEEECCCCCCCCEEEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHH
Confidence                       345668999999999999999999999999764 56799999999999999999999999999999999


Q ss_pred             HhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662          262 ALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG  336 (337)
Q Consensus       262 Al~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~  336 (337)
                      |++|+++.|+||||++++|+||+++++|+++||+|+|||..+ ...+|||||+|+|.||+.|+++|+++|+++|.
T Consensus       283 Al~G~~~~i~tldG~~i~v~ip~g~~~g~~~ri~G~G~P~~~-~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~  356 (372)
T PRK14286        283 AILGAEIEVPTIDGKKAKMKIPEGTESGQVFRLKGHGMPYLG-AYGKGDQHVIVKIEIPKKITRRQRELIEEFAR  356 (372)
T ss_pred             HhCCCEEEEeCCCCCEEEEEeCCccCCCcEEEECCCCCCCCC-CCCCCcEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence            999999999999999899999999999999999999999765 34689999999999999999999999999984

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=100.00  E-value=5e-67  Score=508.40  Aligned_cols=274  Identities=40%  Similarity=0.721  Sum_probs=238.2

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCC
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSS   81 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~   81 (337)
                      .+|||+||||+++||.+|||+|||+||++||||+|++     .++|++|++||+|||||.||+.||+||++++.++    
T Consensus        27 ~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~-----~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~~----   97 (421)
T PTZ00037         27 NEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD-----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGG----   97 (421)
T ss_pred             chhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch-----HHHHHHHHHHHHHhccHHHHHHHhhhcchhcccC----
Confidence            4799999999999999999999999999999999963     4899999999999999999999999998876421    


Q ss_pred             CCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCCC
Q 019662           82 SSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPP  161 (337)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  161 (337)
                      .        +        +.++.|+|+.|||++.     .                               ...++++.|
T Consensus        98 ~--------~--------~~d~~d~f~~~Fggg~-----~-------------------------------~~~~~rg~d  125 (421)
T PTZ00037         98 E--------Q--------PADASDLFDLIFGGGR-----K-------------------------------PGGKKRGED  125 (421)
T ss_pred             C--------C--------CcchhhhHHHhhcccc-----c-------------------------------cccccCCCC
Confidence            0        0        0256789999987310     0                               011346889


Q ss_pred             eeeeeeechhhheeCceEEEEEEEEEE--------------------cCCC--------------------------e--
Q 019662          162 VESKLPCSLEELYSGSTRKMKISRTVV--------------------DANG--------------------------R--  193 (337)
Q Consensus       162 ~~~~l~vsl~e~~~G~~~~i~~~r~~~--------------------~g~G--------------------------~--  193 (337)
                      +.+.|.|||+|+|+|+++++.+.+.+.                    +|.|                          +  
T Consensus       126 i~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i  205 (421)
T PTZ00037        126 IVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPKDAFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKII  205 (421)
T ss_pred             EEEEeeeeHHHHhCCCceEEEeeccccccccCCCCCCCCCCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceec
Confidence            999999999999999999988864321                    1111                          1  


Q ss_pred             -------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEEEEeeCCCccccCCCceEEEEeeCHH
Q 019662          194 -------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLA  260 (337)
Q Consensus       194 -------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~  260 (337)
                                   ++.+.++++|.||||+.+|++|+|+|+|+..+++.+|||+|+|++++|+.|+|+|+||+++++|||+
T Consensus       206 ~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~dG~~I~~~G~Gd~~~~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~  285 (421)
T PTZ00037        206 PESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFHGEADEKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLY  285 (421)
T ss_pred             cccccCCcCCCcceeeeeeEEEEeeCCCCCCCcEEEEecccCCCCCCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHH
Confidence                         2445688999999999999999999999998888999999999999999999999999999999999


Q ss_pred             HHhCCcEEEEecCCCcEEEEEcCCC--CCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECC--CCCCHHHHHHHHHHhC
Q 019662          261 EALGGTSVSLITLDGRDLNIAVTDI--ISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFP--TKLTPEQRAGLKRALG  336 (337)
Q Consensus       261 eAl~G~~~~i~~l~g~~~~v~i~~~--~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P--~~l~~~~~~~l~~~l~  336 (337)
                      |||+|+++.|+||||+.|.|+||++  +++|++++|+|+|||..++++.+|||||+|+|.||  +.|+++|+++|+++||
T Consensus       286 eAllG~~i~I~tLdG~~l~I~ip~g~vt~pg~~~~I~geGmP~~~~~~~rGDL~V~~~V~~P~~~~Ls~~qk~ll~~l~~  365 (421)
T PTZ00037        286 EALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKSLFP  365 (421)
T ss_pred             HHhcCCEEEeeCCCCCeEEEEeCCCcccCCCcEEEeCCCCcccCCCCCCCCCEEEEEEEEcCCCCCCCHHHHHHHHHhcc
Confidence            9999999999999999899999976  99999999999999986644578999999999999  9999999999999997

>PRK14285 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=9.5e-66  Score=493.91  Aligned_cols=293  Identities=32%  Similarity=0.523  Sum_probs=245.5

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662            1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS   80 (337)
Q Consensus         1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~   80 (337)
                      |.+|||++|||+++||.+|||+|||+||++||||+|+.+ ++|.++|++|++||+||+|+.+|+.||+||++++..+.  
T Consensus         1 m~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~~--   77 (365)
T PRK14285          1 MKRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGN-KEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGG--   77 (365)
T ss_pred             CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC-HHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccCC--
Confidence            789999999999999999999999999999999999875 47889999999999999999999999999998775321  


Q ss_pred             CCCCCCCCCCCCCCCC--CCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCC
Q 019662           81 SSSGYSYANGSGGNSK--GFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRK  158 (337)
Q Consensus        81 ~~~~~~~~~~~~~~~~--~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (337)
                         +++++.++ ++++  .|  .++.|+|++|||++. +   .                    ..         ...+++
T Consensus        78 ---~~~~~~~g-~~~~~~~~--~~~~d~f~~~fgg~~-~---~--------------------~~---------~~~~~~  118 (365)
T PRK14285         78 ---GFEGFSGG-FSGFSDIF--EDFGDIFDSFFTGNR-G---Q--------------------DK---------NRKHEK  118 (365)
T ss_pred             ---CccccCCC-cccccccc--ccHHHHHHHhhcCCc-C---C--------------------CC---------CcCCCC
Confidence               11111100 0011  12  357899999997310 0   0                    00         011356


Q ss_pred             CCCeeeeeeechhhheeCceEEEEEEEEEE----cC-----------------CCe------------------------
Q 019662          159 PPPVESKLPCSLEELYSGSTRKMKISRTVV----DA-----------------NGR------------------------  193 (337)
Q Consensus       159 ~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g-----------------~G~------------------------  193 (337)
                      +.|+.+.+.|||+|+|+|+++++.+.|.+.    +|                 .|+                        
T Consensus       119 g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~  198 (365)
T PRK14285        119 GQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEKGTSPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKII  198 (365)
T ss_pred             CCCEEEEEEEEHHHhhCCeEEEEEeeecccCCCCCCcccCCCCCCccCCCccCceeEEecCceeEEeeecCCCCCccccc
Confidence            889999999999999999999998876532    11                 111                        


Q ss_pred             -----------eeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEEEEeeCCCccccCCCceEEEEeeCHHH
Q 019662          194 -----------QTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAE  261 (337)
Q Consensus       194 -----------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~e  261 (337)
                                 ++.+.++++|.||||+++|++|+|+|+|++.++ ..+|||+|+|++++|+.|+|+|+||+++++|||.|
T Consensus       199 ~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~e  278 (365)
T PRK14285        199 SNPCKSCKGKGSLKKKETIELKIPAGIDDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQ  278 (365)
T ss_pred             CCCCCCCCCCCEEeccEEEEEEECCCCCCCCEEEEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHH
Confidence                       356678999999999999999999999999865 55899999999999999999999999999999999


Q ss_pred             HhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662          262 ALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG  336 (337)
Q Consensus       262 Al~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~  336 (337)
                      ||+|+++.|+||||++++|+||+++++|++++|+|+|||..+ ...+|||||+|+|.+|+.|+++|+++|++++.
T Consensus       279 Al~G~~~~i~tldG~~v~V~Ip~g~~~g~~irl~GkG~p~~~-~~~~GDL~V~~~v~~P~~l~~~q~~~l~~l~~  352 (365)
T PRK14285        279 AALGKEIKIQTIASKKIKIKIPKGTENDEQIIIKNEGMPILH-TEKFGNLILIIKIKTPKNLNSNAIKLLENLSK  352 (365)
T ss_pred             HhCCCEEEEECCCCCEEEEEeCCCcCCCcEEEECCCCccCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence            999999999999998899999999999999999999999766 34679999999999999999999999999875

>PRK14278 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.5e-65  Score=492.08  Aligned_cols=288  Identities=34%  Similarity=0.545  Sum_probs=241.3

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662            1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS   80 (337)
Q Consensus         1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~   80 (337)
                      |.+|||+||||+++||.+|||+|||+||++||||+|++  ++|+++|++|++||+||+||.+|++||+||++...++   
T Consensus         1 m~~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~--~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~---   75 (378)
T PRK14278          1 MARDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD--EEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAG---   75 (378)
T ss_pred             CCCCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCc--HHHHHHHHHHHHHHHHhchhhhhhhhhccCCcccccc---
Confidence            78999999999999999999999999999999999985  5789999999999999999999999999998633211   


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCC
Q 019662           81 SSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP  160 (337)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (337)
                       +. .++|+      ..|  .++.|+|++|||++. +  ..                     + .       ...++++.
T Consensus        76 -~~-~~g~~------~~f--~~~~d~f~~ffgg~g-~--~~---------------------~-~-------~~~~~~g~  113 (378)
T PRK14278         76 -GG-GGGFG------GGF--GGLGDVFEAFFGGGA-A--SR---------------------G-P-------RGRVRPGS  113 (378)
T ss_pred             -CC-CCCCC------cCc--CchhHHHHHHhCCCC-C--CC---------------------C-C-------ccCCCCCC
Confidence             00 00111      012  246789999997410 0  00                     0 0       01235688


Q ss_pred             CeeeeeeechhhheeCceEEEEEEEEEE---------------------cCCCe--------------------------
Q 019662          161 PVESKLPCSLEELYSGSTRKMKISRTVV---------------------DANGR--------------------------  193 (337)
Q Consensus       161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~---------------------~g~G~--------------------------  193 (337)
                      |+.+.+.|||+|+|+|+++++.+.+.+.                     +|.|.                          
T Consensus       114 d~~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~  193 (378)
T PRK14278        114 DSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGE  193 (378)
T ss_pred             CeEEEEEEEHHHhcCCeEEEEEEEeeccCCCCcCccCCCCCCceecCCccCceEEEEEEeccceeEEEEEECCCCCccce
Confidence            9999999999999999999998876421                     11221                          


Q ss_pred             -------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEEEEeeCCCccccCCCceEEEEeeCH
Q 019662          194 -------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSL  259 (337)
Q Consensus       194 -------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl  259 (337)
                                   ++.+.++++|.||||+++|++|+|+|+|++.++ +.+|||+|+|++++|+.|+|+|+||+++++|||
T Consensus       194 ~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl  273 (378)
T PRK14278        194 VIPDPCHECAGDGRVRARREITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPM  273 (378)
T ss_pred             eeCCCCCCCCCceeEecceEEEEEECCCCCCCcEEEEccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCH
Confidence                         345668999999999999999999999999865 567999999999999999999999999999999


Q ss_pred             HHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662          260 AEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG  336 (337)
Q Consensus       260 ~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~  336 (337)
                      .+|++|+++.|+|+|+..+.|+||+++++|++++|+|+|||..+ ...+|||||+|+|.||+.|+++|+++|+++++
T Consensus       274 ~eAl~G~~~~i~tld~~~i~v~ip~g~~~g~~lrl~g~G~p~~~-~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~~~~  349 (378)
T PRK14278        274 VDAALGTTVTVEAILDGPSEITIPPGTQPGSVITLRGRGMPHLR-SGGRGDLHAHVEVVVPTRLDHEDIELLRELKA  349 (378)
T ss_pred             HHHhcCCeEEEecCCCCeEEEEeCCCcCCCcEEEECCCCCCCCC-CCCCCCEEEEEEEEcCCCCCHHHHHHHHHHHh
Confidence            99999999999999777799999999999999999999999765 35689999999999999999999999999984

>PRK14279 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5.3e-65  Score=492.65  Aligned_cols=310  Identities=30%  Similarity=0.474  Sum_probs=235.1

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662            1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS   80 (337)
Q Consensus         1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~   80 (337)
                      |.+|||+||||+++|+.+|||+|||+||++||||+|+.+ ++|+++|++|++||+|||||+||++||+||+++...+...
T Consensus         7 ~~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~~~~~g~~~   85 (392)
T PRK14279          7 VEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGD-PAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGG   85 (392)
T ss_pred             cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-hHHHHHHHHHHHHHHHhcchhhhhHHHHhhhhcccccccc
Confidence            468999999999999999999999999999999999865 4789999999999999999999999999997644322110


Q ss_pred             C----CCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCC
Q 019662           81 S----SSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVP  156 (337)
Q Consensus        81 ~----~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (337)
                      .    ++++++|..+.   +. ...+++++|+.+++....++.+.               |.++ |+.+. .. .....+
T Consensus        86 ~~~~~~~~~~g~~~~~---~~-~~~d~~~~f~~~~~~~~~~f~d~---------------f~~~-fg~~~-~~-~~~~~~  143 (392)
T PRK14279         86 RRFDGGGGFGGFGTGG---DG-AEFNLNDLFDAAGRGGGGGIGDL---------------FGGL-FNRGG-GS-ARPSRP  143 (392)
T ss_pred             ccccCCCCCCCccccc---cc-cCcChhhhhcccccccccchhhh---------------hhhh-hcCCC-cc-cccCCC
Confidence            0    00011111000   00 00122333322111000000000               0000 11000 00 001124


Q ss_pred             CCCCCeeeeeeechhhheeCceEEEEEEEEEE----cCCC---------------------------------------e
Q 019662          157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVV----DANG---------------------------------------R  193 (337)
Q Consensus       157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g~G---------------------------------------~  193 (337)
                      +++.|+.+.|.|||+|+|+|+++++.+.+.+.    +|+|                                       +
T Consensus       144 ~~g~di~~~l~ltLee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~  223 (392)
T PRK14279        144 RRGNDLETETTLDFVEAAKGVTMPLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGS  223 (392)
T ss_pred             CCCCCeEEEEEEEHHHHhCCeEEEEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEecceEEEEecCCCCceeE
Confidence            57899999999999999999999998865421    1111                                       0


Q ss_pred             -------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEEEEeeCCCccccCCCceEEEEeeCH
Q 019662          194 -------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSL  259 (337)
Q Consensus       194 -------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl  259 (337)
                                   ++.+.++++|.||||+++|++|+|+|+|++.++ ..+|||+|+|++++|+.|+|+|+||+++++|||
T Consensus       224 ~i~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl  303 (392)
T PRK14279        224 IIEDPCEECKGTGVTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSF  303 (392)
T ss_pred             EeCCcCCCCCCCeEEEEeeeeEEEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccH
Confidence                         456678999999999999999999999999764 567999999999999999999999999999999


Q ss_pred             HHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662          260 AEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG  336 (337)
Q Consensus       260 ~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~  336 (337)
                      .+|++|+++.|+|+||+ +.|+||+++++|+++||+|+|||...  +.+|||||+|+|.||+.|+++|+++|++++.
T Consensus       304 ~eAl~G~~~~v~~ldg~-i~v~Ip~g~~~g~~iri~g~G~p~~~--~~~GDL~I~~~v~~P~~Ls~~q~~~l~~~~~  377 (392)
T PRK14279        304 TELALGSTLSVPTLDGP-VGVKVPAGTADGRILRVRGRGVPKRS--GGAGDLLVTVKVAVPPNLDGAAAEALEAYAE  377 (392)
T ss_pred             HHHcCCceEEEEcCCce-EEEEECCCCCCCCEEEECCCCCCCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            99999999999999997 89999999999999999999999643  5689999999999999999999999999875

>PRK14277 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=8.1e-65  Score=491.11  Aligned_cols=299  Identities=33%  Similarity=0.576  Sum_probs=243.0

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCC
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSS   81 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~   81 (337)
                      .+|||+||||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||+||+|+.+|++||+||++++..+...+
T Consensus         4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~   82 (386)
T PRK14277          4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGD-KEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQ   82 (386)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc-hHHHHHHHHHHHHHHHhCCHHHHHHHHhhcccccccccccc
Confidence            47999999999999999999999999999999999865 46889999999999999999999999999998875321110


Q ss_pred             CC-CCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCC
Q 019662           82 SS-GYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP  160 (337)
Q Consensus        82 ~~-~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (337)
                      ++ +..++..+   ++.|...++.|+|++||++ .|+. +                      + .  .   ....++++.
T Consensus        83 ~~~~~~g~~~~---~~~~~~~~~~d~f~~~F~~-~fgg-~----------------------~-~--~---~~~~~~kg~  129 (386)
T PRK14277         83 GGFGQGGFGGG---GFDFDFGGFGDIFEDIFGD-FFGT-G----------------------R-R--R---AETGPQKGA  129 (386)
T ss_pred             CCcCCCCcccc---CccccccchhHHHHHhhcc-cccC-C----------------------C-c--C---CCCCCCCCC
Confidence            00 00111100   1121112466889999873 1210 0                      0 0  0   011235788


Q ss_pred             CeeeeeeechhhheeCceEEEEEEEEEE----cCCC-----------------e--------------------------
Q 019662          161 PVESKLPCSLEELYSGSTRKMKISRTVV----DANG-----------------R--------------------------  193 (337)
Q Consensus       161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g~G-----------------~--------------------------  193 (337)
                      |+.+.|.|||+|+|+|+++++.+.|.+.    +|+|                 .                          
T Consensus       130 di~~~l~vtLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~  209 (386)
T PRK14277        130 DIRYDLELTFEEAAFGTEKEIEVERFEKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGK  209 (386)
T ss_pred             CEEEEEEEEHHHHhCCeEEEEEEEeeccCCCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCccee
Confidence            9999999999999999999999876542    1211                 0                          


Q ss_pred             -------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeCCCccccCCCceEEEEeeCH
Q 019662          194 -------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSL  259 (337)
Q Consensus       194 -------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl  259 (337)
                                   ++.+.++++|.||||+++|++|+|+|+|++.+ +..+|||+|+|++++|+.|+|+|+||+++++|||
T Consensus       210 ~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl  289 (386)
T PRK14277        210 IITDPCNKCGGTGRIRRRRKIKVNIPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITF  289 (386)
T ss_pred             eccCCCCCCCCCcEEeeeeEEEEecCCCccCCcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCH
Confidence                         34566789999999999999999999999864 4568999999999999999999999999999999


Q ss_pred             HHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662          260 AEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG  336 (337)
Q Consensus       260 ~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~  336 (337)
                      +|||+|+++.|+||||+ +.|+||+++++|++++|+|+|||..+ +..+|||||+|+|.||+.|+++|+++|++++.
T Consensus       290 ~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~~ri~g~G~p~~~-~~~~GDL~v~~~V~~P~~Ls~~qk~~l~~l~~  364 (386)
T PRK14277        290 TDAALGGEIEIPTLDGK-VKFTIPEGTQTGTKFRLRGKGIPHLR-GRGRGDQIVKVYIEVPKKLTEKQKELLREFEK  364 (386)
T ss_pred             HHHhCCCEEEEEcCCCC-EEEEECCCCCCCCEEEECCCCCCCCC-CCCCCCEEEEEEEEeCCCCCHHHHHHHHHHHh
Confidence            99999999999999997 89999999999999999999999765 34689999999999999999999999999973

>PRK14276 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=8.2e-65  Score=490.16  Aligned_cols=293  Identities=31%  Similarity=0.551  Sum_probs=241.5

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662            1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS   80 (337)
Q Consensus         1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~   80 (337)
                      -.+|||+||||+++||.+|||+|||+||++||||+|++  +.|+++|++|++||+||+||.+|++||+||++++.++...
T Consensus         2 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~--~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~   79 (380)
T PRK14276          2 NNTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKE--PGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGG   79 (380)
T ss_pred             CCCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--cCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCC
Confidence            04899999999999999999999999999999999986  4688999999999999999999999999999887643211


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCC
Q 019662           81 SSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP  160 (337)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (337)
                      .++++++|..    +..|  .++.|+|++|||++.    +.                     . .       ...++++.
T Consensus        80 ~~~~~~~~~~----~~~~--~~~~d~f~~~fgg~~----~~---------------------~-~-------~~~~~~g~  120 (380)
T PRK14276         80 GAGGFGGFDG----SGGF--GGFEDIFSSFFGGGG----AR---------------------R-N-------PNAPRQGD  120 (380)
T ss_pred             CCCCCCCccc----cccc--cchhhHHHHHhCccc----cc---------------------c-C-------cCCCCCCC
Confidence            0001111110    0012  256799999997310    00                     0 0       01235688


Q ss_pred             CeeeeeeechhhheeCceEEEEEEEEEE----cC-----------------CCe--------------------------
Q 019662          161 PVESKLPCSLEELYSGSTRKMKISRTVV----DA-----------------NGR--------------------------  193 (337)
Q Consensus       161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g-----------------~G~--------------------------  193 (337)
                      |+.+.|.|||+|+|+|+++++.+.+.+.    +|                 .|.                          
T Consensus       121 di~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~  200 (380)
T PRK14276        121 DLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGK  200 (380)
T ss_pred             CEEEEEEEEHHHhcCCeEEEEEeeccccCCCCcCcccCCCCCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCc
Confidence            9999999999999999999998865421    11                 110                          


Q ss_pred             -------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEEEEeeCCCccccCCCceEEEEeeCH
Q 019662          194 -------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSL  259 (337)
Q Consensus       194 -------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl  259 (337)
                                   ++.+.++++|.||||+++|++|+|+|+|++.++ ..+|||+|+|+|++|+.|+|+|+||+++++|||
T Consensus       201 ~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl  280 (380)
T PRK14276        201 EIKEPCQTCHGTGHEKQAHTVSVKIPAGVETGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISF  280 (380)
T ss_pred             cccCCCCCCCCceEEEEEEEEEEEeCCCccCCcEEEEeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCH
Confidence                         345668899999999999999999999999754 567999999999999999999999999999999


Q ss_pred             HHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662          260 AEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG  336 (337)
Q Consensus       260 ~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~  336 (337)
                      .||++|+++.|+|+||+ ++|+||+++++|++++|+|+|||..+ ...+|||||+|+|.||+.|+++|+++|++++.
T Consensus       281 ~eAl~G~~~~v~tldg~-i~v~ip~g~~~g~~~~i~g~G~p~~~-~~~~GDL~V~~~v~~P~~l~~~q~~~l~~~~~  355 (380)
T PRK14276        281 VQAALGDTVEVPTVHGD-VELKIPAGTQTGKKFRLRGKGAPKLR-GGGNGDQHVTVNIVTPTKLNDAQKEALKAFAK  355 (380)
T ss_pred             HHHhCCCeEEEEcCCCc-EEEEECCCCCCCCEEEECCCCcCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            99999999999999997 89999999999999999999999765 34689999999999999999999999999973

>PRK14280 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.7e-64  Score=487.37  Aligned_cols=290  Identities=32%  Similarity=0.566  Sum_probs=241.2

Q ss_pred             CC-CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCC
Q 019662            1 MG-MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPP   79 (337)
Q Consensus         1 m~-~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~   79 (337)
                      |. +|||+||||+++|+.+|||+|||+||++||||+|++  +.|+++|++|++||+||+||.+|++||+||++++.++.+
T Consensus         1 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~--~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~   78 (376)
T PRK14280          1 MAKRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKE--EGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFG   78 (376)
T ss_pred             CCCCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCcC
Confidence            53 799999999999999999999999999999999986  368999999999999999999999999999988764211


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCC
Q 019662           80 SSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKP  159 (337)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (337)
                      .  ++   |++.++.+ .|   ++.|+|++|||++.    ..                .    .         ...++++
T Consensus        79 ~--~~---~~~~~~~~-~~---~~~d~f~~~fgg~~----~~----------------~----~---------~~~~~kg  116 (376)
T PRK14280         79 G--GG---FGGGDFGG-GF---GFEDIFSSFFGGGG----RR----------------R----D---------PNAPRQG  116 (376)
T ss_pred             C--CC---CCCCCccc-cc---cchhhHHHHhCCcc----cc----------------C----c---------ccccccc
Confidence            0  00   10000000 11   45789999997310    00                0    0         0123568


Q ss_pred             CCeeeeeeechhhheeCceEEEEEEEEEE----cCCC-----------------e-------------------------
Q 019662          160 PPVESKLPCSLEELYSGSTRKMKISRTVV----DANG-----------------R-------------------------  193 (337)
Q Consensus       160 ~d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g~G-----------------~-------------------------  193 (337)
                      .|+.+.+.|||+|+|+|++++|.+.|.+.    +|+|                 .                         
T Consensus       117 ~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G  196 (376)
T PRK14280        117 ADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTG  196 (376)
T ss_pred             cCEEEEEEEEHHHHhCCceeEEEEeeeccCCCCCCcccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCC
Confidence            89999999999999999999998876532    1111                 0                         


Q ss_pred             --------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeCCCccccCCCceEEEEeeC
Q 019662          194 --------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVS  258 (337)
Q Consensus       194 --------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Is  258 (337)
                                    ++.+.++++|.||+|+++|++|+|+|+|++.+ ++.+|||+|+|++++|+.|+|+|+||+++++||
T Consensus       197 ~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Is  276 (376)
T PRK14280        197 QEIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLT  276 (376)
T ss_pred             ceecCCCCCCCCceEEEEEEEEEEEeCCCCcCCcEEEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecC
Confidence                          24566899999999999999999999999974 457899999999999999999999999999999


Q ss_pred             HHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662          259 LAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG  336 (337)
Q Consensus       259 l~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~  336 (337)
                      |+|||+|+++.|+|+||+ +.|+||+++++|++++|+|+|||... ...+|||||+|+|.+|+.|+++|+++|++++.
T Consensus       277 l~eAl~G~~~~i~tldg~-i~v~ip~g~~~g~~~~i~g~G~p~~~-~~~~GDL~v~~~v~~P~~Ls~~q~~~l~~l~~  352 (376)
T PRK14280        277 FAQAALGDEIEVPTLHGK-VKLKIPAGTQTGTQFRLKGKGVPNVR-GYGQGDQYVVVRVVTPTKLTDRQKELLREFAE  352 (376)
T ss_pred             HHHHhCCCEEEEecCCce-EEEEECCCCCCCcEEEEcCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            999999999999999996 89999999999999999999999765 34689999999999999999999999999873

>PRK14297 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.3e-64  Score=488.94  Aligned_cols=293  Identities=32%  Similarity=0.578  Sum_probs=243.1

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCC
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSS   81 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~   81 (337)
                      .+|||+||||+++|+.+|||+|||+||++||||+|+.+ ++|+++|++|++||+||+||.+|++||+||++++..+.   
T Consensus         3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~---   78 (380)
T PRK14297          3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGN-KEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAG---   78 (380)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccC---
Confidence            47999999999999999999999999999999999875 47899999999999999999999999999998875321   


Q ss_pred             CCCCCCCCCCCCCCCCCCC-CchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCC
Q 019662           82 SSGYSYANGSGGNSKGFNP-RNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP  160 (337)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~-~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (337)
                      +.+.++|+     ++.+.. .++.|+|++|||++ ++  +.                     + .   .   ...++++.
T Consensus        79 ~~~~~~~~-----~~~~~~~~~~~d~f~~~fgg~-~g--~~---------------------~-~---~---~~~~~kg~  122 (380)
T PRK14297         79 GFGSGGFG-----GFDFSDMGGFGDIFDSFFGGG-FG--SS---------------------S-R---R---RNGPQRGA  122 (380)
T ss_pred             CCCCCCCC-----CcCcccccchhHHHHHHhccC-cc--cc---------------------c-c---c---cCCCCCCC
Confidence            00001111     112111 24779999999741 11  00                     0 0   0   11235788


Q ss_pred             CeeeeeeechhhheeCceEEEEEEEEEE----c-----------------CCCe--------------------------
Q 019662          161 PVESKLPCSLEELYSGSTRKMKISRTVV----D-----------------ANGR--------------------------  193 (337)
Q Consensus       161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~-----------------g~G~--------------------------  193 (337)
                      |+++.|.|||+|+|+|++++|.+.+.+.    +                 |.|.                          
T Consensus       123 di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~  202 (380)
T PRK14297        123 DIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGK  202 (380)
T ss_pred             CEEEEEEEEHHHhcCCeEEEEEeeeeccCCCcccccccCCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCce
Confidence            9999999999999999999998865431    1                 1111                          


Q ss_pred             -------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeCCCccccCCCceEEEEeeCH
Q 019662          194 -------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSL  259 (337)
Q Consensus       194 -------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl  259 (337)
                                   ++.+.++++|.||||+++|++|+|+|+|++.+ +..+|||+|+|++.+|+.|+|+|+||+++++|||
T Consensus       203 ~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~I~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl  282 (380)
T PRK14297        203 VIEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISF  282 (380)
T ss_pred             EcCCCCCCCCCCeEEEeEeEEEEEeCCCCCCCcEEEEecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCH
Confidence                         24567899999999999999999999999864 4568999999999999999999999999999999


Q ss_pred             HHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662          260 AEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG  336 (337)
Q Consensus       260 ~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~  336 (337)
                      +|||+|+++.|+|+||+ ++|+||+++++|+++||+|+|||..+ .+.+|||||+|+|.||+.|+++|+++|+++|+
T Consensus       283 ~eAl~G~~~~i~~ldg~-~~v~ip~g~~~g~~~ri~g~G~p~~~-~~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~  357 (380)
T PRK14297        283 AKAALGTEIKVPTVDGE-VKYEVPAGTQPGTVFRLKGKGVPRVN-STGRGNQYVTVIVDIPKKLNSKQKEALTMFME  357 (380)
T ss_pred             HHHhCCCcEEEEcCCCc-EEEEECCCcCCCCEEEEcCCCcCCCC-CCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHH
Confidence            99999999999999996 89999999999999999999999765 35789999999999999999999999999985

>PRK14287 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.1e-64  Score=485.56  Aligned_cols=285  Identities=29%  Similarity=0.560  Sum_probs=239.4

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662            1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS   80 (337)
Q Consensus         1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~   80 (337)
                      -.+|||++|||+++||.+|||+|||+||++||||+|+.  ++|+++|++|++||++|+||.+|++||+||++++.++.. 
T Consensus         2 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~--~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~~-   78 (371)
T PRK14287          2 SKRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA--PDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFG-   78 (371)
T ss_pred             CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcccccccC-
Confidence            03799999999999999999999999999999999985  468899999999999999999999999999987753210 


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCC
Q 019662           81 SSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP  160 (337)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (337)
                       +++   +  +     +|  .++.|+|++|||++.    +.                     . .       ...++++.
T Consensus        79 -~~~---~--~-----~f--~~~~d~f~~~fgg~~----~~---------------------~-~-------~~~~~~g~  112 (371)
T PRK14287         79 -GGG---A--G-----DF--GGFSDIFDMFFGGGG----GR---------------------R-N-------PNAPRQGA  112 (371)
T ss_pred             -CCC---C--c-----cc--cchHHHHHhhhcccc----CC---------------------C-C-------CCCCCCCC
Confidence             000   0  0     12  136789999997410    00                     0 0       01134688


Q ss_pred             CeeeeeeechhhheeCceEEEEEEEEEE----cC-----------------CCe--------------------------
Q 019662          161 PVESKLPCSLEELYSGSTRKMKISRTVV----DA-----------------NGR--------------------------  193 (337)
Q Consensus       161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g-----------------~G~--------------------------  193 (337)
                      |+.+.+.|||+|+|+|++++|.+.+.+.    +|                 .|.                          
T Consensus       113 d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~  192 (371)
T PRK14287        113 DLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGK  192 (371)
T ss_pred             CEEEEEEEEHHHhcCCeEEEEEEeeeccCCCCCCcccCCCCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCc
Confidence            9999999999999999999998876432    11                 111                          


Q ss_pred             -------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeCCCccccCCCceEEEEeeCH
Q 019662          194 -------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSL  259 (337)
Q Consensus       194 -------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl  259 (337)
                                   ++.+.++++|.||||+++|++|+|+|+|++.+ ++.+|||+|+|++++|+.|+|+|+||+++++|||
T Consensus       193 ~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl  272 (371)
T PRK14287        193 IIKQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTF  272 (371)
T ss_pred             cccccCCCCCCeeEEeeeEEEEEEECCcCCCCCEEEEccCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccH
Confidence                         23445789999999999999999999999974 4578999999999999999999999999999999


Q ss_pred             HHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662          260 AEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG  336 (337)
Q Consensus       260 ~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~  336 (337)
                      .||++|+++.|+|+||+ +.|+||+++++|+++||+|+|||..+ ...+|||||+|+|.+|+.|+.+|+++|++++.
T Consensus       273 ~eAl~G~~~~i~~ldg~-i~v~ip~g~~~g~~~ri~g~G~p~~~-~~~~GDL~V~~~v~~P~~l~~~q~~ll~~l~~  347 (371)
T PRK14287        273 PQVALGDEIEVPTLNGK-VKLKIPAGTQTGTSFRLRGKGVPNVH-GRGQGDQHVQVRVVTPKNLTEKEKELMREFAG  347 (371)
T ss_pred             HHHhCCCEEEEEcCCCC-EEEEECCCccCCcEEEEcCCCccCCC-CCCCCCEEEEEEEEcCCCCCHHHHHHHHHHHh
Confidence            99999999999999997 89999999999999999999999765 34689999999999999999999999999973

>PRK14298 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.1e-64  Score=486.18  Aligned_cols=286  Identities=34%  Similarity=0.560  Sum_probs=240.8

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCC
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSS   81 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~   81 (337)
                      .+|||+||||+++|+.+|||+|||+||++||||+|++  +.|+++|++|++||++|+||.+|+.||+||+++++.+..+ 
T Consensus         4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~-   80 (377)
T PRK14298          4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE--PDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSA-   80 (377)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCC--hhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccccCc-
Confidence            3799999999999999999999999999999999985  4688999999999999999999999999999877532110 


Q ss_pred             CCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCCC
Q 019662           82 SSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPP  161 (337)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  161 (337)
                      +   ..|..+     +|  .++.|+|++|||++.    ..                     .         ...++++.|
T Consensus        81 ~---~~~~~~-----~~--~~~~d~f~~~Fgg~~----~~---------------------~---------~~~~~~g~d  116 (377)
T PRK14298         81 E---DIFRGA-----DF--GGFGDIFEMFFGGGG----RR---------------------G---------RMGPRRGSD  116 (377)
T ss_pred             c---cccccC-----Cc--CcchhhhHhhhcCCC----cc---------------------C---------CCCCCCCCC
Confidence            0   011100     12  246689999997310    00                     0         012356889


Q ss_pred             eeeeeeechhhheeCceEEEEEEEEEE----c-----------------CCCe---------------------------
Q 019662          162 VESKLPCSLEELYSGSTRKMKISRTVV----D-----------------ANGR---------------------------  193 (337)
Q Consensus       162 ~~~~l~vsl~e~~~G~~~~i~~~r~~~----~-----------------g~G~---------------------------  193 (337)
                      +.+.+.|||+|+|+|+++++.+.+.+.    +                 |.|.                           
T Consensus       117 i~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~  196 (377)
T PRK14298        117 LRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQV  196 (377)
T ss_pred             EEEEEEEEHHHhhCCeEEEEEEEeeccCCCCCCCcccCCCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcc
Confidence            999999999999999999998876432    1                 1221                           


Q ss_pred             ------------eeecceEEEEEeCCCCcCCCEEEECCCCCCC-CCCCCccEEEEEEeeCCCccccCCCceEEEEeeCHH
Q 019662          194 ------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQ-PNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLA  260 (337)
Q Consensus       194 ------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~-~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~  260 (337)
                                  ++.+.++++|.||||+++|++|+|+|+|++. +++.+|||+|+|++++|+.|+|+|+||+++++|||.
T Consensus       197 ~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~  276 (377)
T PRK14298        197 IESPCPVCSGTGKVRKTRKITVNVPAGADSGLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFT  276 (377)
T ss_pred             cCCCCCCCCCccEEEEEEEEEecCCCCCCCCCEEEEecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHH
Confidence                        2345689999999999999999999999996 567799999999999999999999999999999999


Q ss_pred             HHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662          261 EALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG  336 (337)
Q Consensus       261 eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~  336 (337)
                      |||+|+++.|+|+||+ +.|+||+++++|++++|+|+|||..+ +..+|||||+|+|.+|+.|+++++++|++++.
T Consensus       277 eAl~G~~~~i~tldG~-i~v~ip~g~~~g~~lri~g~G~p~~~-~~~~GDL~V~~~V~~P~~ls~~~~~ll~~l~~  350 (377)
T PRK14298        277 QAALGADIMVPTLYGK-VKMNIPPGTQTHSVFRLKDKGMPRLH-GHGKGDQLVKVIVKTPTKLTQEQKELLREFDE  350 (377)
T ss_pred             HHhCCCeEEEecCCCC-EEEEeCCCcccCCEEEECCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            9999999999999997 89999999999999999999999765 34689999999999999999999999999873

>PRK14295 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.1e-64  Score=486.81  Aligned_cols=303  Identities=33%  Similarity=0.542  Sum_probs=237.1

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhc----ccccccCC
Q 019662            1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQ----YGEEGLKD   76 (337)
Q Consensus         1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~----~G~~~~~~   76 (337)
                      |.+|||+||||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||+||+||.+|++||+    ||++++..
T Consensus         7 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~~   85 (389)
T PRK14295          7 IEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGD-AKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFRP   85 (389)
T ss_pred             cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc-hhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhccccccc
Confidence            568999999999999999999999999999999999865 4689999999999999999999999999    99887753


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCC
Q 019662           77 MPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVP  156 (337)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (337)
                      +... + +.     +   +|.|   +++++|..+++.+.++  +....++.        .|+++ |+.+  +   ....+
T Consensus        86 ~~~~-~-~~-----~---~~~~---~~~~~f~~~~~~~~~~--~~~~~f~d--------~f~~~-fg~~--~---~~~~~  136 (389)
T PRK14295         86 GPGG-G-GG-----G---GFNF---DLGDLFGGGAQGGGGA--GGGGGLGD--------VFGGL-FNRG--G---RRTQP  136 (389)
T ss_pred             CCCC-C-CC-----C---CCCc---cccccccccccccccc--ccccchhh--------hhccc-ccCC--C---CCCCC
Confidence            2100 0 00     0   1111   2233333322111000  00000000        00000 1100  0   01123


Q ss_pred             CCCCCeeeeeeechhhheeCceEEEEEEEEEE----c-------------------------------------------
Q 019662          157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVV----D-------------------------------------------  189 (337)
Q Consensus       157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~-------------------------------------------  189 (337)
                      +++.|+++.|.|||+|+|+|++++|.+.+.+.    +                                           
T Consensus       137 ~~g~di~~~l~lsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~  216 (389)
T PRK14295        137 RRGADVESEVTLSFTEAIDGATVPLRLTSQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGL  216 (389)
T ss_pred             CCCCCEEEEEEEEHHHHhCCceEEEEeeccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEecceEEEEecCCCcceeE
Confidence            57899999999999999999999999875421    1                                           


Q ss_pred             ----------CCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeCCCccccCCCceEEEEeeC
Q 019662          190 ----------ANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVS  258 (337)
Q Consensus       190 ----------g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Is  258 (337)
                                |.| ++.+.++++|.||||+++|++|+|+|+|++.+ +..+|||+|+|++++|+.|+|+|+||+++++||
T Consensus       217 ~~~~~C~~C~G~g-~~~~~~~l~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Is  295 (389)
T PRK14295        217 IADDPCLVCKGSG-RAKSSRTMQVRIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVT  295 (389)
T ss_pred             EeccCCCCCCCCc-eEeeeeEEEEEeCCCCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeec
Confidence                      111 34567899999999999999999999999864 566899999999999999999999999999999


Q ss_pred             HHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662          259 LAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG  336 (337)
Q Consensus       259 l~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~  336 (337)
                      |.+|++|++++|+|+||+.++|+||+++++|++++|+|+|||..+  +.+|||||+|+|.||+.|+++|+++|++++.
T Consensus       296 l~eAl~G~~~~I~tldG~~~~v~ip~g~~~g~~iri~G~G~p~~~--~~~GDL~i~~~v~~P~~Ls~~qk~~l~~l~~  371 (389)
T PRK14295        296 FPEAALGAEVRVPTLGGPPVTVKLPPGTPNGRVLRVRGKGAVRKD--GTRGDLLVTVEVAVPKDLSGKAREALEAFRE  371 (389)
T ss_pred             HHHHhCCCeEEEECCCCCEEEEEECCccCCCcEEEECCCCcCCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            999999999999999998899999999999999999999999643  5689999999999999999999999999874

>PRK14301 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.5e-64  Score=484.37  Aligned_cols=290  Identities=31%  Similarity=0.578  Sum_probs=241.1

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCC
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSS   81 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~   81 (337)
                      .+|||++|||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||+||+||.+|+.||+||+++++++.   
T Consensus         3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~~---   78 (373)
T PRK14301          3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDN-PEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNG---   78 (373)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCC-hHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccCC---
Confidence            58999999999999999999999999999999999875 46889999999999999999999999999998775321   


Q ss_pred             CCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCCC
Q 019662           82 SSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPP  161 (337)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  161 (337)
                        ++++|.+.   ...|  ..+.|+|++|||.+..   +                      + .  .    ...++++.|
T Consensus        79 --~~~g~~~~---~~~~--~~f~d~f~~~fg~g~~---~----------------------~-~--~----~~~~~~g~d  119 (373)
T PRK14301         79 --GFGGFSSA---EDIF--SHFSDIFGDLFGFSGG---G----------------------S-R--R----GPRPQAGSD  119 (373)
T ss_pred             --CCCCcccc---cccc--cchHHHHHHHhhccCc---c----------------------c-c--c----CCCCCCCCC
Confidence              11111100   0012  2356788888762100   0                      0 0  0    112357889


Q ss_pred             eeeeeeechhhheeCceEEEEEEEEEE----cCCC---------------------------------------e-----
Q 019662          162 VESKLPCSLEELYSGSTRKMKISRTVV----DANG---------------------------------------R-----  193 (337)
Q Consensus       162 ~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g~G---------------------------------------~-----  193 (337)
                      +.+.|.|||+|+|+|+++++.+.+.+.    +|+|                                       +     
T Consensus       120 i~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~  199 (373)
T PRK14301        120 LRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRVITHP  199 (373)
T ss_pred             EEEEEeccHHHHhCCceEEEEeeecccCCCCCCcccCCCCCCcccCCccCeeEEEEEeeeEEEEEeCCCCCceeeecCCC
Confidence            999999999999999999998865431    1111                                       0     


Q ss_pred             --------eeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeCCCccccCCCceEEEEeeCHHHHhC
Q 019662          194 --------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALG  264 (337)
Q Consensus       194 --------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~eAl~  264 (337)
                              ++.+.++++|.||||+++|++|+|+|+|++.+ ++.+|||+|+|++++|+.|+|+|+||+++++|||.+|++
T Consensus       200 C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~  279 (373)
T PRK14301        200 CPKCKGSGIVQQTRELKVRIPAGVDTGSRLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAAL  279 (373)
T ss_pred             CCCCCCCceeccceEEEEEeCCCCcCCCEEEEeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhC
Confidence                    35667899999999999999999999999875 567899999999999999999999999999999999999


Q ss_pred             CcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662          265 GTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG  336 (337)
Q Consensus       265 G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~  336 (337)
                      |+++.|+|+||+ ++|+||+++++|++++|+|+|||..+ ...+|||||+|+|.+|+.|+++|+++|++++.
T Consensus       280 G~~~~v~tldG~-i~v~ip~g~~~g~~~ri~g~G~p~~~-~~~~GDL~I~~~V~~P~~l~~~q~~~l~~l~~  349 (373)
T PRK14301        280 GDRIEVPTLDDP-VTLDIPKGTQSGEVFRLRGKGLPYLG-SSQKGDLLVEVSVVTPTKLTKRQEELLREFEA  349 (373)
T ss_pred             CCeEEEecCCcc-EEEEECCCcCCCcEEEEcCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            999999999997 99999999999999999999999875 35689999999999999999999999999863

>PRK14281 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=8.4e-64  Score=485.33  Aligned_cols=307  Identities=35%  Similarity=0.601  Sum_probs=241.8

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662            1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS   80 (337)
Q Consensus         1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~   80 (337)
                      |.+|||+||||+++|+.+|||+|||+||++||||+|+.+ ++|+++|++|++||++|+|+.+|+.||+||++++......
T Consensus         1 ~~~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~~~~~~   79 (397)
T PRK14281          1 MKRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDN-KEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAAS   79 (397)
T ss_pred             CCCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc-hHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhcccccc
Confidence            789999999999999999999999999999999999875 4688999999999999999999999999999887532110


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCchhHHH---HhhhCCC-CCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCC
Q 019662           81 SSSGYSYANGSGGNSKGFNPRNAEDIF---AEFFGSS-PFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVP  156 (337)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~d~f---~~~fg~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (337)
                      .+  ..++..+   +     .++.|+|   ++|||++ .++....       +      +|.+. |+.+  ........+
T Consensus        80 ~~--~~~~~~~---~-----~~~~d~f~~f~~~Fgg~~~~~~~~~-------~------~~~~~-~~g~--~~~~~~~~~  133 (397)
T PRK14281         80 GG--GPGYGGG---G-----GDFNDIFSAFNDMFGGGARRGGGSP-------F------GFEDV-FGGG--GRRRRASAG  133 (397)
T ss_pred             CC--CCCCCcC---C-----CCHHHHHHHHHHHhCCCcccccccc-------c------ccccc-cCCC--cccccccCC
Confidence            00  0011000   0     1344554   5788742 1110000       0      00000 1100  000001123


Q ss_pred             CCCCCeeeeeeechhhheeCceEEEEEEEEEE----cC----------------CCe-----------------------
Q 019662          157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVV----DA----------------NGR-----------------------  193 (337)
Q Consensus       157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g----------------~G~-----------------------  193 (337)
                      .++.|+++.+.|||+|+|+|+++++.+.+.+.    +|                .|.                       
T Consensus       134 ~~g~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G  213 (397)
T PRK14281        134 IPGTDLKIRLKLTLEEIAKGVEKTLKIKKQVPCKECNGTGSKTGATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGG  213 (397)
T ss_pred             CCCCCEEEEEEeEHHHHhCCeEEEEEEEeeecCCCCCCcccCCCCCccCCCCCCCcEEEEEEecccceEEEEEecCCCcc
Confidence            46899999999999999999999998875532    11                111                       


Q ss_pred             ----------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeCCCccccCCCceEEEEe
Q 019662          194 ----------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHK  256 (337)
Q Consensus       194 ----------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~  256 (337)
                                      ++.++++++|.||||+++|++|+|+|+|++.+ ++.+|||+|+|++++|+.|+|+|+||+++++
T Consensus       214 ~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~  293 (397)
T PRK14281        214 EGRVVKDRCPACYGEGIKQGEVTVKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLA  293 (397)
T ss_pred             eeeeeCCCCCCCCCCccEecceEEEEecCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEE
Confidence                            23456799999999999999999999999976 4679999999999999999999999999999


Q ss_pred             eCHHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662          257 VSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG  336 (337)
Q Consensus       257 Isl~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~  336 (337)
                      |||.|||+|+++.|+|+||+ +.|+||+++++|+++||+|+|||..+ ...+|||||+|+|.||+.|+++|+++|++++.
T Consensus       294 Isl~eAl~G~~~~i~tldg~-i~v~ip~g~~~G~~~ri~g~G~P~~~-~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~  371 (397)
T PRK14281        294 VSYPDLVLGTKVEVPTLDGA-VKLTIPAGTQPETMLRIPGKGIGHLR-GSGRGDQYVRVNVFVPKEVSHQDKELLKELKK  371 (397)
T ss_pred             ecHHHHhcCCeEEeecCCcc-EEEEeCCccCCCcEEEEcCCCCCCCC-CCCCCCEEEEEEEEcCCCCCHHHHHHHHHHHh
Confidence            99999999999999999997 89999999999999999999999765 34789999999999999999999999999874

>PRK14282 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=8.2e-64  Score=481.75  Aligned_cols=300  Identities=30%  Similarity=0.512  Sum_probs=241.3

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662            1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS   80 (337)
Q Consensus         1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~   80 (337)
                      +.+|||+||||+++||.+|||+|||+||++||||+|+.+.++|+++|++|++||+||+||.+|+.||+||++++......
T Consensus         2 ~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~~~   81 (369)
T PRK14282          2 EKKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQE   81 (369)
T ss_pred             CCCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCcccccccccc
Confidence            13799999999999999999999999999999999987545689999999999999999999999999998876532110


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCC
Q 019662           81 SSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP  160 (337)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (337)
                      .+ +.++|....+.  .|......|+|++|||+..    +.                     .    .   ....+++++
T Consensus        82 ~~-~~g~~~~~~~~--~~~~~~~~d~f~~~fgg~~----~~---------------------~----~---~~~~~~~g~  126 (369)
T PRK14282         82 TE-SGGGFFEDIFK--DFENIFNRDIFDIFFGERR----TQ---------------------E----E---QREYARRGE  126 (369)
T ss_pred             CC-CCCcccccccc--cccccccchhhhHhhcccC----Cc---------------------c----c---ccCCCCCCC
Confidence            00 00011000000  1111011378888886310    00                     0    0   011235789


Q ss_pred             CeeeeeeechhhheeCceEEEEEEEEEE----c-----------------CCCe--------------------------
Q 019662          161 PVESKLPCSLEELYSGSTRKMKISRTVV----D-----------------ANGR--------------------------  193 (337)
Q Consensus       161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~-----------------g~G~--------------------------  193 (337)
                      |+.+.+.|||+|+|+|+++++.+.|.+.    +                 |.|.                          
T Consensus       127 di~~~l~~slee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~  206 (369)
T PRK14282        127 DIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGK  206 (369)
T ss_pred             CeEEEEEEEHHHhcCCeEEEEEeeecccCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcce
Confidence            9999999999999999999998876421    1                 1111                          


Q ss_pred             -------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeCCCccccCCCceEEEEeeCH
Q 019662          194 -------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSL  259 (337)
Q Consensus       194 -------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl  259 (337)
                                   ++.+.++++|.||||+.+|++|+|+|+|++.+ ++.+|||+|+|++++|+.|+|+|+||+++++|||
T Consensus       207 ~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl  286 (369)
T PRK14282        207 IPGEYCHECGGSGRIRRRVRTTVKIPAGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDY  286 (369)
T ss_pred             eCCCCCCCCCCceeEEEEEEEEEEeCCCCCCCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCH
Confidence                         34556899999999999999999999999864 5678999999999999999999999999999999


Q ss_pred             HHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662          260 AEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG  336 (337)
Q Consensus       260 ~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~  336 (337)
                      .||++|+++.|+|+||++++|+||+++++|++++|+|+|||... .+.+|||||+|+|.+|+.|+.+++++|++++.
T Consensus       287 ~eAl~G~~~~i~~ldG~~i~v~Ip~g~~~g~~iri~GkG~p~~~-~~~~GDL~V~~~v~~P~~l~~~~~~ll~~l~~  362 (369)
T PRK14282        287 LQAILGTTVEVPLPEGGTTMLKIPPGTQPETVFRLKGKGLPNMR-YGRRGDLIVNVHVEIPKRLSREERKLLKELAK  362 (369)
T ss_pred             HHHhCCCEEEEeCCCCcEEEEEeCCCcCCCCEEEECCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence            99999999999999998899999999999999999999999754 34689999999999999999999999999874

>PRK14284 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=7.3e-64  Score=485.20  Aligned_cols=302  Identities=31%  Similarity=0.524  Sum_probs=238.9

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC-C
Q 019662            3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS-S   81 (337)
Q Consensus         3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~-~   81 (337)
                      +|||+||||+++||.+|||+|||+||++||||+|+++ +.|+++|++|++||+||+|+.+|+.||+||++++..+... +
T Consensus         1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~g~~~~~   79 (391)
T PRK14284          1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGD-AEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFG   79 (391)
T ss_pred             CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-hHHHHHHHHHHHHHHHhcCHHHHHHHHhccccccccccCCcC
Confidence            4999999999999999999999999999999999875 4689999999999999999999999999999876432100 0


Q ss_pred             CCCCCCCCCCCCCCC--CCCC--CchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCC
Q 019662           82 SSGYSYANGSGGNSK--GFNP--RNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPR  157 (337)
Q Consensus        82 ~~~~~~~~~~~~~~~--~~~~--~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (337)
                      +++++.+.... ..|  .|.+  ..+.|+|+.||++....                        |+..  .   ....++
T Consensus        80 ~~g~~~~~~~~-~~~~~~f~~~~~~~~d~f~~~fgg~g~~------------------------~~~~--~---~~~~~~  129 (391)
T PRK14284         80 GAGMGNMEDAL-RTFMGAFGGEFGGGGSFFEGLFGGLGEA------------------------FGMR--G---GPAGAR  129 (391)
T ss_pred             CCCcCcccchh-hhccccccccccccccchhhhccCcccc------------------------cccc--c---cCCCcC
Confidence            01110000000 000  0110  01246677776531000                        0000  0   011235


Q ss_pred             CCCCeeeeeeechhhheeCceEEEEEEEEEE----cC-----------------CCe-----------------------
Q 019662          158 KPPPVESKLPCSLEELYSGSTRKMKISRTVV----DA-----------------NGR-----------------------  193 (337)
Q Consensus       158 ~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g-----------------~G~-----------------------  193 (337)
                      ++.|+.+.|.|||+|+|+|+++++.+.+.+.    +|                 .|.                       
T Consensus       130 ~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~  209 (391)
T PRK14284        130 QGASKKVHITLSFEEAAKGVEKELLVSGYKSCDACSGSGANSSQGIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRV  209 (391)
T ss_pred             CCCCeEEEEEEEHHHHhCCeeEEEEEeeeccCCCCcccccCCCCCCeecCccCCeeEEEEEeceEEEEEECCCCCCCCcc
Confidence            7889999999999999999999998876421    11                 110                       


Q ss_pred             ------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeCCCccccCCCceEEEEeeCHH
Q 019662          194 ------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLA  260 (337)
Q Consensus       194 ------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~  260 (337)
                                  ++.+.++++|.||||+.+|++|+|+|+|++.+ ++.+|||+|+|++++|+.|+|+|+||+++++|||+
T Consensus       210 ~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~  289 (391)
T PRK14284        210 ITDPCSVCRGQGRIKDKRSVHVHIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFV  289 (391)
T ss_pred             cCCcCCCCCCcceecceEEEEEEECCCCCCCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHH
Confidence                        34567899999999999999999999999986 56789999999999999999999999999999999


Q ss_pred             HHhCCcEEEEecCC-CcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662          261 EALGGTSVSLITLD-GRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG  336 (337)
Q Consensus       261 eAl~G~~~~i~~l~-g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~  336 (337)
                      ||++|+++.|+|++ |..++|+||+++++|++++|+|+|||..+ ...+|||||+|+|.+|+.|+++|+++|++++.
T Consensus       290 eAl~G~~~~v~tld~g~~i~v~Ip~g~~~g~~~~i~g~G~p~~~-~~~~GDL~V~~~v~~P~~l~~~q~~ll~~l~~  365 (391)
T PRK14284        290 DAALGMKKEIPTLLKEGTCRLTIPEGIQSGTILKVRGQGFPNVH-GKGRGDLLVRISVETPQNLSEEQKELLRQFAA  365 (391)
T ss_pred             HHhCCCeEEEeecCCCcEEEEEECCccCCCeEEEECCCCCCCCC-CCCCCcEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            99999999999999 66799999999999999999999999775 34689999999999999999999999999873

>PRK14294 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.2e-63  Score=480.06  Aligned_cols=291  Identities=37%  Similarity=0.608  Sum_probs=241.8

Q ss_pred             CC-CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCC
Q 019662            1 MG-MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPP   79 (337)
Q Consensus         1 m~-~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~   79 (337)
                      |. +|||+||||+++|+.+|||+|||+||++||||+|+.+ ++|+++|++|++||+||+||.+|+.||+||++++.++. 
T Consensus         1 ~~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~~-   78 (366)
T PRK14294          1 MVKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGD-KEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTG-   78 (366)
T ss_pred             CCCCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc-hHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCCC-
Confidence            54 8999999999999999999999999999999999865 46899999999999999999999999999998875310 


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCC
Q 019662           80 SSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKP  159 (337)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (337)
                        .+++++|.     . .|  .++.|+|++|||.+..+                         + +  .   ....++++
T Consensus        79 --~~~~~~~~-----~-~~--~~~~d~f~~~fg~g~~~-------------------------~-~--~---~~~~~~~g  117 (366)
T PRK14294         79 --FSGFSGFD-----D-IF--SSFGDIFEDFFGFGGGR-------------------------R-G--R---SRTAVRAG  117 (366)
T ss_pred             --CCCcCccc-----c-ch--hhhhhhHHHhhccCCCc-------------------------C-C--c---ccCCCCCC
Confidence              00111110     0 12  24678999998711000                         0 0  0   00123568


Q ss_pred             CCeeeeeeechhhheeCceEEEEEEEEEE----cCC---------------------------------------C----
Q 019662          160 PPVESKLPCSLEELYSGSTRKMKISRTVV----DAN---------------------------------------G----  192 (337)
Q Consensus       160 ~d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g~---------------------------------------G----  192 (337)
                      .|+.+.+.|||+|+|+|+++++.+.+.+.    +|+                                       |    
T Consensus       118 ~d~~~~l~lslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~  197 (366)
T PRK14294        118 ADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGTSPTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKVIV  197 (366)
T ss_pred             CCceEEEEeeHHHhcCCeEEEEEeeecccCCCCCCccccCCCCcccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCeecC
Confidence            89999999999999999999998865431    111                                       1    


Q ss_pred             ---------eeeecceEEEEEeCCCCcCCCEEEECCCCCCC-CCCCCccEEEEEEeeCCCccccCCCceEEEEeeCHHHH
Q 019662          193 ---------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQ-PNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEA  262 (337)
Q Consensus       193 ---------~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~-~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~eA  262 (337)
                               .++.+.++++|.||||+++|++|+|+|+|++. .++.+|||+|+|++++|+.|+|+|+||+++++|||.+|
T Consensus       198 ~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eA  277 (366)
T PRK14294        198 SPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQA  277 (366)
T ss_pred             cCCCCCCCceEeecceeEEEecCCCCcCCcEEEEccCccCCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHH
Confidence                     03566789999999999999999999999986 45678999999999999999999999999999999999


Q ss_pred             hCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662          263 LGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG  336 (337)
Q Consensus       263 l~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~  336 (337)
                      |+|+++.|+|+||+ +.|.||+++++|++++|+|+|||..+ ...+|||||+|+|.+|+.|+.+|+++|++++.
T Consensus       278 l~G~~~~i~tldG~-~~v~ip~g~~~g~~iri~G~G~p~~~-~~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~~  349 (366)
T PRK14294        278 ALGAQIEVPTLEGE-RELKIPKGTQPGDIFRFKGKGIPSLR-GGGRGDQIIEVEVKVPTRLTKKQEELLTEFAR  349 (366)
T ss_pred             hCCCeEEEECCCCc-EEEEECCCcCCCCEEEECCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence            99999999999997 79999999999999999999999765 34689999999999999999999999999874

>PRK14291 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.2e-63  Score=480.46  Aligned_cols=305  Identities=34%  Similarity=0.600  Sum_probs=244.6

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662            1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS   80 (337)
Q Consensus         1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~   80 (337)
                      |.+|||++|||+++|+.+|||+|||+||++||||+|++  ++|+++|++|++||+||+||.+|++||+||++++......
T Consensus         1 ~~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~   78 (382)
T PRK14291          1 AKKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN--PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQ   78 (382)
T ss_pred             CCCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--ccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccccccCc
Confidence            78999999999999999999999999999999999986  4688999999999999999999999999999876532110


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCC
Q 019662           81 SSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP  160 (337)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (337)
                       ..+..+|+     .  |...++.|+|++||+.  |++++.               |++.....+   .......+.++.
T Consensus        79 -~~~~~~~~-----~--~~~~~~~d~f~~~f~~--fg~~~~---------------fg~~~~~~~---~~~~~~~~~~g~  130 (382)
T PRK14291         79 -QQGQEGFS-----D--FGGGNIEDILEDVFDI--FGFGDI---------------FGRRRATRE---RRKTYQRPVKGE  130 (382)
T ss_pred             -cccccccc-----c--ccCCCHHHHHHHHHHh--cccccc---------------ccccccccc---cccccccccCCC
Confidence             00000111     1  1123677899998652  211110               000000000   000011235789


Q ss_pred             CeeeeeeechhhheeCceEEEEEEEEEE----cCCC-----------------e--------------------------
Q 019662          161 PVESKLPCSLEELYSGSTRKMKISRTVV----DANG-----------------R--------------------------  193 (337)
Q Consensus       161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g~G-----------------~--------------------------  193 (337)
                      |+.+.|.|||+|+|+|+++++.+.+.+.    +|+|                 .                          
T Consensus       131 di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~  210 (382)
T PRK14291        131 DIYQTVEISLEEAYTGTTVSLEVPRYVPCEACGGTGYDPGSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGVLREP  210 (382)
T ss_pred             CEEEEEEEEHHHhhCCEEEEEEEeeeccCCCCccccCCCCCCCccCCCCCCceEEEEecceEEEEecCCCCCCceEEccC
Confidence            9999999999999999999999876532    1211                 0                          


Q ss_pred             --------eeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeCCCccccCCCceEEEEeeCHHHHhC
Q 019662          194 --------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALG  264 (337)
Q Consensus       194 --------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~eAl~  264 (337)
                              ++.+.++++|.||||+.+|++|+|+|+|++.+ ++.+|||||+|++++|+.|+|+|+||+++++|||.||++
T Consensus       211 C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~  290 (382)
T PRK14291        211 CSKCNGRGLVIKKETIKVRIPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVL  290 (382)
T ss_pred             CCCCCCCceEEeeeEEEEEeCCCCCCCCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhC
Confidence                    35567899999999999999999999999874 678999999999999999999999999999999999999


Q ss_pred             CcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCC--CCC------HHHHHHHHHHhC
Q 019662          265 GTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPT--KLT------PEQRAGLKRALG  336 (337)
Q Consensus       265 G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~--~l~------~~~~~~l~~~l~  336 (337)
                      |+++.|+|+||+.++|+||+++++|++++|+|+|||..+ ...+|||||+|+|.||+  .|+      ++|+++|++++.
T Consensus       291 G~~~~i~~ldG~~l~V~Ip~g~~~G~~i~i~G~G~p~~~-~~~~GDL~V~~~V~~P~~~~ls~~~~~~~~~~~~~~~l~~  369 (382)
T PRK14291        291 GTELEVPLLDGKKEKVKIPPGTKEGDKIRVPGKGMPRLK-GSGYGDLVVRVHIDVPKISMLSKLMGDGKKAKKLLKELDK  369 (382)
T ss_pred             CCEEEEecCCCCEEEEEECCccCCCCEEEECCCCCCCCC-CCCCCCEEEEEEEEeCCCcCcCccccCCHHHHHHHHHHHh
Confidence            999999999998899999999999999999999999875 34689999999999998  599      999999999864

>PRK14299 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=7.2e-63  Score=460.97  Aligned_cols=282  Identities=35%  Similarity=0.618  Sum_probs=232.1

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCC
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSS   81 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~   81 (337)
                      .+|||+||||+++||.+|||+|||+||++||||+|++  +.++++|++|++||++|+|+.+|+.||+||++++..+....
T Consensus         3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~   80 (291)
T PRK14299          3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS--PGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGP   80 (291)
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCC
Confidence            4899999999999999999999999999999999985  46899999999999999999999999999998654321110


Q ss_pred             CCCCCCCCCCCCCCCCCCCCchhHHHHhhhCC-CCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCC
Q 019662           82 SSGYSYANGSGGNSKGFNPRNAEDIFAEFFGS-SPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP  160 (337)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (337)
                      ..+..++  ++.+++.+  .+++|+|++|||+ ++++  +.                +.. +. ..      ...++++.
T Consensus        81 ~~~~~~~--~~~~~~~~--~~~~d~f~~~fgg~~~~~--~~----------------g~~-~~-~~------~~~~~~g~  130 (291)
T PRK14299         81 PPGPPGG--GDFSGFNV--GDFSDFFQQLFGGRGGFG--GF----------------GDL-FG-SV------GRRARKGR  130 (291)
T ss_pred             CCCCCCC--CCccccCc--CCHHHHHHHHhCCCCCCC--Cc----------------ccc-cc-cc------cCCCCCCC
Confidence            0000000  00111122  3678999999984 2111  00                000 00 00      01246789


Q ss_pred             CeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEEEEeeC
Q 019662          161 PVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKP  240 (337)
Q Consensus       161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~  240 (337)
                      |+++.+.|||+|+|+|+++.+.+.       |      ++++|+||||+++|++|+++|+|++.     |||+|+|++++
T Consensus       131 dl~~~l~isL~ea~~G~~~~i~l~-------g------~~~~V~Ip~G~~~G~~ir~~g~G~~~-----GDL~v~i~v~~  192 (291)
T PRK14299        131 DLEAELPLTLEEAYRGGEKVVEVA-------G------ERLSVRIPPGVREGQVIRLAGKGRQG-----GDLYLVVRLLP  192 (291)
T ss_pred             CEEEEEEecHHHHhCCCeEEEeeC-------C------EEEEEecCCCcCCCcEEEECCCCCCC-----CCEEEEEEEcC
Confidence            999999999999999999988763       4      57899999999999999999999973     99999999999


Q ss_pred             CCccccCCCceEEEEeeCHHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECC
Q 019662          241 HDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFP  320 (337)
Q Consensus       241 ~~~f~r~g~dL~~~~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P  320 (337)
                      |+.|+|+|+||+++++|||.+|++|+++.|+|+||+ ++|+||+++++|+++||+|+|||..  ++.+|||||+|+|.+|
T Consensus       193 h~~f~R~G~DL~~~~~Isl~eAl~G~~~~v~tldG~-~~v~ip~~~~~g~~~rl~g~G~p~~--~~~~GDL~v~~~V~~P  269 (291)
T PRK14299        193 HPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDGP-VEVTIPPRTQAGRKLRLKGKGWPRG--PAGRGDQYAEVRITIP  269 (291)
T ss_pred             CCCeEEECCEEEEEEecCHHHHhCCCEEEEECCCCC-EEEEeCCCcCCCCEEEECCCCCCCC--CCCCCCEEEEEEEECC
Confidence            999999999999999999999999999999999996 8999999999999999999999964  3578999999999999


Q ss_pred             CCCCHHHHHHHHHHhC
Q 019662          321 TKLTPEQRAGLKRALG  336 (337)
Q Consensus       321 ~~l~~~~~~~l~~~l~  336 (337)
                      +.|+++|+++|++++.
T Consensus       270 ~~l~~~~~~~l~~l~~  285 (291)
T PRK14299        270 TRPTPEEERLYKQLAE  285 (291)
T ss_pred             CCCCHHHHHHHHHHHh
Confidence            9999999999999863

>PRK14290 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.5e-62  Score=472.37  Aligned_cols=296  Identities=32%  Similarity=0.542  Sum_probs=243.6

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662            1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS   80 (337)
Q Consensus         1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~   80 (337)
                      |.+|||+||||+++||.+|||+|||+||++||||+|+.+.++|+++|++|++||++|+|+.+|++||+||+.++.++   
T Consensus         1 m~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~~---   77 (365)
T PRK14290          1 MAKDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAG---   77 (365)
T ss_pred             CCCChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcccccC---
Confidence            77899999999999999999999999999999999987655789999999999999999999999999999876421   


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCC
Q 019662           81 SSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP  160 (337)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (337)
                       +++   ++.++..  .|  .++.|+|+.|||+. ++. +.                    ++..  +.  ....++++.
T Consensus        78 -~~~---~~~~~~~--~~--~~~~d~f~~~fg~~-~~~-~~--------------------~~~~--~~--~~~~~~~~~  123 (365)
T PRK14290         78 -GSN---FNWDNFT--HF--SDINDIFNQIFGGN-FGS-DF--------------------FSGF--GN--QQSTRNIDL  123 (365)
T ss_pred             -CCC---ccccccc--cc--cchhHHHHHHhcCc-ccc-cc--------------------cccc--cc--ccCCCCCCC
Confidence             111   1000000  12  36789999999842 110 00                    0000  00  011123578


Q ss_pred             CeeeeeeechhhheeCceEEEEEEEEEE----cC----------------CCe---------------------------
Q 019662          161 PVESKLPCSLEELYSGSTRKMKISRTVV----DA----------------NGR---------------------------  193 (337)
Q Consensus       161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g----------------~G~---------------------------  193 (337)
                      |+.+.|.|||+|+|+|+++++.+.+.+.    +|                .|.                           
T Consensus       124 di~~~l~lsLee~~~G~~~~i~~~r~~~C~~C~G~g~~~~~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~  203 (365)
T PRK14290        124 DIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTGAKNGKLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRI  203 (365)
T ss_pred             CEEEEEEecHHHhcCCEEEEEEeeecccCCCCccccCCCCCCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeE
Confidence            9999999999999999999998865432    11                111                           


Q ss_pred             ------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEEEEeeCCCccccCCCceEEEEeeCHHH
Q 019662          194 ------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAE  261 (337)
Q Consensus       194 ------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~e  261 (337)
                                  ++.+.++++|.||||+.+|++|+|+|+|+. +++.+|||+|+|++++|+.|+|+|+||+++++|||.+
T Consensus       204 ~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~-~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~e  282 (365)
T PRK14290        204 PEEKCPRCNGTGTVVVNEDISVKIPKGATDNLRLRVKGKGQS-YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQ  282 (365)
T ss_pred             ccCCCCCCCCceeEEEeeEEEEEECCCCCCCcEEEEccccCC-CCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHH
Confidence                        345668899999999999999999999996 6778999999999999999999999999999999999


Q ss_pred             HhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662          262 ALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG  336 (337)
Q Consensus       262 Al~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~  336 (337)
                      |++|+++.|+|++|. ++|+||+++++|++++|+|+|||..+. ..+|||||+|+|.+|+.|+++++++|+++|+
T Consensus       283 Al~G~~~~I~~~~g~-i~V~Ip~g~~~g~~iri~g~G~p~~~~-~~~GDL~V~~~V~~P~~l~~~~~~ll~~~~~  355 (365)
T PRK14290        283 AALGGEIEIKLFREK-YNLKIPEGTQPGEVLKIKGAGMPHLNG-HGSGDLLVRINVEVPKRLTSKQKELIREFFD  355 (365)
T ss_pred             HhCCCEEEEEcCCce-EEEEECCccCCCcEEEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence            999999999999985 999999999999999999999997653 4689999999999999999999999999985

>PRK14300 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.8e-62  Score=472.60  Aligned_cols=294  Identities=31%  Similarity=0.533  Sum_probs=240.9

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662            1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS   80 (337)
Q Consensus         1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~   80 (337)
                      |.+|||+||||+++||.+|||+|||+||++||||+|+.  ..++++|++|++||++|+|+.+|+.||+||++++......
T Consensus         1 ~~~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~   78 (372)
T PRK14300          1 MSQDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDA--KDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSR   78 (372)
T ss_pred             CCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--cCHHHHHHHHHHHHHHhhhHhHhhHHHhcccccccccccc
Confidence            78999999999999999999999999999999999984  3578899999999999999999999999999877532110


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCC
Q 019662           81 SSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP  160 (337)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (337)
                      ++.+  ++     +  +|. .++.++|++||++. |+.++.                    ..        ....+.++.
T Consensus        79 ~~~g--~~-----~--~~~-~~~~~~f~~~f~~~-~gg~~~--------------------~~--------~~~~~~~g~  119 (372)
T PRK14300         79 GGGG--NH-----G--GFH-PDINDIFGDFFSDF-MGGSRR--------------------SR--------PTSSKVRGS  119 (372)
T ss_pred             CCCC--CC-----C--ccc-cchhhhHHHHHHhh-cCCCCC--------------------CC--------CCcCCCCCC
Confidence            0000  00     0  111 13456677776531 110000                    00        001124678


Q ss_pred             CeeeeeeechhhheeCceEEEEEEEEEE----cCCC-----------------e--------------------------
Q 019662          161 PVESKLPCSLEELYSGSTRKMKISRTVV----DANG-----------------R--------------------------  193 (337)
Q Consensus       161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g~G-----------------~--------------------------  193 (337)
                      |+.+.+.|||+|+|+|+++++.+.+.+.    +|+|                 .                          
T Consensus       120 di~~~l~~sLee~~~G~~k~i~~~r~~~C~~C~G~g~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~  199 (372)
T PRK14300        120 DLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQIIKN  199 (372)
T ss_pred             CeeEEEEEEHHHHhCCceEEEEeeeccccCCCCCcccCCCCCCccCCCccCeEEEEEeeceEEEEEeCCCCCccceEeCC
Confidence            9999999999999999999998876432    1211                 1                          


Q ss_pred             ---------eeecceEEEEEeCCCCcCCCEEEECCCCCCC-CCCCCccEEEEEEeeCCCccccCCCceEEEEeeCHHHHh
Q 019662          194 ---------QTPESEILTIDVKPGWKKGTKITFPDKGNEQ-PNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEAL  263 (337)
Q Consensus       194 ---------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~-~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~eAl  263 (337)
                               ++.+.++++|.||||+++|++|+|+|+|++. +++.+|||+|+|++++|+.|+|+|+||+++++|||++|+
T Consensus       200 ~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al  279 (372)
T PRK14300        200 PCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAA  279 (372)
T ss_pred             CCCCCCCceEEEeeEEEEEEECCCCCCCcEEEEeccccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHh
Confidence                     3456789999999999999999999999986 466789999999999999999999999999999999999


Q ss_pred             CCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662          264 GGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG  336 (337)
Q Consensus       264 ~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~  336 (337)
                      +|+++.|+|+||+.++|+||+++++|++++|+|+|||..+ ...+|||||+|+|.||++|+++|+++|++++.
T Consensus       280 ~G~~~~i~~ldg~~i~v~Ip~g~~~g~~iri~g~G~p~~~-~~~~GDL~V~~~v~~P~~ls~~qk~~l~~l~~  351 (372)
T PRK14300        280 LGGEIEVPVIEGGKVNLTIPAGTQNGDQLRLRSKGMSKMR-STIRGDMLTHIHVEVPKNLSKRQRELLEEFKK  351 (372)
T ss_pred             CCCEEEEecCCCCEEEEEECCccCCCcEEEECCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            9999999999998899999999999999999999999765 34689999999999999999999999999873

>PRK10767 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.2e-62  Score=472.61  Aligned_cols=288  Identities=37%  Similarity=0.629  Sum_probs=238.6

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCC
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSS   81 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~   81 (337)
                      .+|||+||||+++||.+|||+|||+||++||||+|+.+ +.|+++|++|++||++|+|+.+|+.||+||++++..+..  
T Consensus         3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~--   79 (371)
T PRK10767          3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGD-KEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGG--   79 (371)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc-HHHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCCC--
Confidence            47999999999999999999999999999999999865 468899999999999999999999999999987753210  


Q ss_pred             CCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCCC
Q 019662           82 SSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPP  161 (337)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  161 (337)
                      +++   |. + .  .+|. ..+.++|+.|||++. +  .                      .         ...++++.|
T Consensus        80 ~~~---~~-~-~--~~~~-~~f~~~f~~~fgg~~-~--~----------------------~---------~~~~~~g~d  117 (371)
T PRK10767         80 GGG---FG-G-G--GGFG-DIFGDIFGDIFGGGR-G--G----------------------G---------RQRARRGAD  117 (371)
T ss_pred             CCC---CC-C-c--cccc-cchhhhhhhhccCCc-c--c----------------------c---------CCCCCCCCC
Confidence            011   11 0 0  0121 124566776665210 0  0                      0         012356889


Q ss_pred             eeeeeeechhhheeCceEEEEEEEEEE----cCCC-----------------e---------------------------
Q 019662          162 VESKLPCSLEELYSGSTRKMKISRTVV----DANG-----------------R---------------------------  193 (337)
Q Consensus       162 ~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g~G-----------------~---------------------------  193 (337)
                      +++.|.|||+|+|+|+++++.+.+.+.    +|+|                 .                           
T Consensus       118 i~~~l~vsLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~  197 (371)
T PRK10767        118 LRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKIIKDP  197 (371)
T ss_pred             eEEEEEeehHHhhCCeeEEEeeeecccCCCCCCcccCCCCCCccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeECCCC
Confidence            999999999999999999998865432    1111                 0                           


Q ss_pred             --------eeecceEEEEEeCCCCcCCCEEEECCCCCCC-CCCCCccEEEEEEeeCCCccccCCCceEEEEeeCHHHHhC
Q 019662          194 --------QTPESEILTIDVKPGWKKGTKITFPDKGNEQ-PNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALG  264 (337)
Q Consensus       194 --------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~-~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~eAl~  264 (337)
                              ++.+.++++|.||||+++|++|+|+|+|++. +++.+|||+|+|++++|+.|+|+|+||++++.|||++||+
T Consensus       198 C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~  277 (371)
T PRK10767        198 CKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAAL  277 (371)
T ss_pred             CCCCCCCceEeeeeeEEEecCCCCCCCcEEEEecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhC
Confidence                    3456688999999999999999999999985 4567899999999999999999999999999999999999


Q ss_pred             CcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662          265 GTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG  336 (337)
Q Consensus       265 G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~  336 (337)
                      |+++.|+|+|| +++|.||+++++|++++|+|+|||..+ ++.+|||||+|+|.+|+.|+.+|+++|++++.
T Consensus       278 G~~~~i~~ldG-~i~v~ip~g~~~g~~~~i~g~G~p~~~-~~~~GDL~v~~~v~~P~~l~~~~~~ll~~l~~  347 (371)
T PRK10767        278 GGEIEVPTLDG-RVKLKIPEGTQTGKLFRLRGKGVKSVR-SGARGDLYCQVVVETPVNLTKRQKELLEEFEE  347 (371)
T ss_pred             CCeEEEecCCC-cEEEEeCCCCCCCCEEEECCCCcCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            99999999999 589999999999999999999999765 35789999999999999999999999999974

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=100.00  E-value=1.3e-61  Score=465.06  Aligned_cols=291  Identities=36%  Similarity=0.623  Sum_probs=240.6

Q ss_pred             CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCCCC
Q 019662            4 DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSSSS   83 (337)
Q Consensus         4 ~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~~~   83 (337)
                      |||++|||+++|+.+|||+|||+||++||||+|+.  ++++++|++|++||++|+|+.+|++||+||++++..+....++
T Consensus         1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~~~~   78 (354)
T TIGR02349         1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGG   78 (354)
T ss_pred             ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--ccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcCCCC
Confidence            79999999999999999999999999999999984  4688999999999999999999999999999877532110000


Q ss_pred             CCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCCCee
Q 019662           84 GYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPPVE  163 (337)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  163 (337)
                      +++++.     ...|  .++.|+|++|||++ ++. +                     ..        +...+++++|+.
T Consensus        79 ~~~~~~-----~~~~--~~~~~~f~~~fg~~-~g~-~---------------------~~--------~~~~~~~~~d~~  120 (354)
T TIGR02349        79 GFNGFD-----IGFF--GDFGDIFGDFFGGG-GGS-G---------------------RR--------RRSGPRRGEDLR  120 (354)
T ss_pred             CcCCcc-----ccCc--CchhhhHHHHhccC-ccc-C---------------------cc--------ccCCCCCCCCeE
Confidence            111000     0012  25679999999741 100 0                     00        011245788999


Q ss_pred             eeeeechhhheeCceEEEEEEEEEE----cCCC-------------------------------------------e---
Q 019662          164 SKLPCSLEELYSGSTRKMKISRTVV----DANG-------------------------------------------R---  193 (337)
Q Consensus       164 ~~l~vsl~e~~~G~~~~i~~~r~~~----~g~G-------------------------------------------~---  193 (337)
                      +.+.|||+|+|+|+++++.+.+.+.    +|.|                                           +   
T Consensus       121 ~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~  200 (354)
T TIGR02349       121 YDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIK  200 (354)
T ss_pred             EEEEEEHHHHhCCeeEEEEeecCCcCCCCCCCCCCCCCCCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceecC
Confidence            9999999999999999998875432    1111                                           0   


Q ss_pred             ----------eeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeCCCccccCCCceEEEEeeCHHHH
Q 019662          194 ----------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEA  262 (337)
Q Consensus       194 ----------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~eA  262 (337)
                                ++.+.++++|.||||+++|++|+|+|+|++.+ +..+|||+|+|++++|+.|+|+|+||+++++|||+||
T Consensus       201 ~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eA  280 (354)
T TIGR02349       201 EPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQA  280 (354)
T ss_pred             CCCCCCCCCcEecccceEEEEECCCCCCCCEEEEecCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHH
Confidence                      34567899999999999999999999999864 5678999999999999999999999999999999999


Q ss_pred             hCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662          263 LGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG  336 (337)
Q Consensus       263 l~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~  336 (337)
                      |+|+++.|+|+|| .++|.||+++++|++++|+|+|||..+ ...+|||||+|+|.+|+.|+.+|+++|+++|+
T Consensus       281 l~G~~~~i~~ldG-~i~v~ip~g~~~g~~~~i~g~G~p~~~-~~~~GDL~i~~~v~~P~~l~~~~~~~l~~~~~  352 (354)
T TIGR02349       281 ILGGEIEVPTLDG-DVKLKIPAGTQSGTVFRLKGKGVPRLR-GNGRGDLLVTVKVETPKNLSKEQKELLEELAE  352 (354)
T ss_pred             hCCCeEEEecCCc-eEEEEECCcccCCcEEEECCCCcCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            9999999999999 599999999999999999999999765 34789999999999999999999999999985

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=100.00  E-value=6.7e-61  Score=450.93  Aligned_cols=289  Identities=27%  Similarity=0.406  Sum_probs=240.7

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662            1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS   80 (337)
Q Consensus         1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~   80 (337)
                      -.+|||++|||+++||.+|||+|||+||++||||+|+.  +.++++|++|++||++|+|+.+|+.||+||......+...
T Consensus         2 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~--~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~~~~~   79 (306)
T PRK10266          2 ELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKE--PDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNR   79 (306)
T ss_pred             CcCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCccccc
Confidence            04899999999999999999999999999999999975  3689999999999999999999999999986421111100


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCC
Q 019662           81 SSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP  160 (337)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (337)
                       +.   .++++    ..+...++.++|+.|||..  +  +.                     .    .    ...++++.
T Consensus        80 -~~---~~~~~----~~~~~~~~~~~f~~~~g~~--~--~~---------------------~----~----~~~~~kg~  118 (306)
T PRK10266         80 -QF---QHGDG----QSFNAEDFDDIFSSIFGQH--A--RQ---------------------S----R----QRPAARGH  118 (306)
T ss_pred             -cc---ccCCC----CCCCCCCHHHHHHHHhCCC--C--CC---------------------C----C----CCCCCCCC
Confidence             00   00000    0122236789999998731  0  00                     0    0    01235688


Q ss_pred             CeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeec-ceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEe
Q 019662          161 PVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPE-SEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDE  238 (337)
Q Consensus       161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~-~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v  238 (337)
                      |+.+++.|||+|++.|+++.+.+.+.+|++.|.+..+ .++++|.||+|+++|++|+|+|+|++.. +..+|||+|+|++
T Consensus       119 di~~~v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v  198 (306)
T PRK10266        119 DIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHI  198 (306)
T ss_pred             ceEEEEEEEHHHhcCCceEEEEEecccccCCCeEEEeeeEEEEEEECCCCcCCcEEEEecCCcCCCCCCCCccEEEEEEE
Confidence            9999999999999999999999999998877733222 3579999999999999999999999864 4568999999999


Q ss_pred             eCCCccccCCCceEEEEeeCHHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEE
Q 019662          239 KPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVK  318 (337)
Q Consensus       239 ~~~~~f~r~g~dL~~~~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~  318 (337)
                      +||+.|+|+|+||+++++|||++|++|+++.|+|++|+ +.|+||+++++|+++||+|+|||..+   .+|||||+|+|.
T Consensus       199 ~ph~~f~r~g~DL~~~~~Isl~~al~G~~~~i~~~~g~-v~v~ip~g~~~g~~~ri~g~G~p~~~---~~GdL~v~~~v~  274 (306)
T PRK10266        199 APHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKES-ILLTIPPGSQAGQRLRVKGKGLVSKK---QTGDLYAVLKIV  274 (306)
T ss_pred             cCCCCeEEeCCceEEEEecCHHHHhCCCEEEeeCCCcc-EEEEeCCCcCCCCEEEECCCCCCCCC---CCCCEEEEEEEE
Confidence            99999999999999999999999999999999999997 89999999999999999999999653   589999999999


Q ss_pred             CCCCCCHHHHHHHHHHhC
Q 019662          319 FPTKLTPEQRAGLKRALG  336 (337)
Q Consensus       319 ~P~~l~~~~~~~l~~~l~  336 (337)
                      +|+.|+++|+++|++++.
T Consensus       275 ~P~~l~~~q~~l~~~l~~  292 (306)
T PRK10266        275 MPPKPDEKTAALWQQLAD  292 (306)
T ss_pred             CCCCCCHHHHHHHHHHHh
Confidence            999999999999999874

>PRK14283 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.5e-61  Score=465.90  Aligned_cols=291  Identities=33%  Similarity=0.589  Sum_probs=232.4

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCC
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSS   81 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~   81 (337)
                      .+|||++|||+++||.+|||+|||+||++||||+|++  +.|+++|++|++||++|+|+.+|++||+||++++.+...  
T Consensus         4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~--~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~~~~~--   79 (378)
T PRK14283          4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE--EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGFSQ--   79 (378)
T ss_pred             cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHhchhHHHHHHhhhcccccccccc--
Confidence            3799999999999999999999999999999999985  478999999999999999999999999999987652100  


Q ss_pred             CCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCCC
Q 019662           82 SSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPP  161 (337)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  161 (337)
                      .   +.|.          ..+++++|..|+++  |+  +.               |..+.|+++  .    ...++++.|
T Consensus        80 ~---~~~~----------~~~~~~~~~~~~~~--~~--~~---------------f~~~~fgg~--~----~~~~~kg~d  121 (378)
T PRK14283         80 E---DIFN----------NINFEDIFQGFGFG--IG--NI---------------FDMFGFGGG--S----RHGPQRGAD  121 (378)
T ss_pred             c---cccc----------ccCccccccccccc--hh--hh---------------ccccccCCC--C----CCCccCCCC
Confidence            0   0000          01112222222110  00  00               000001100  0    011346889


Q ss_pred             eeeeeeechhhheeCceEEEEEEEEEE----cC-----------------CCe---------------------------
Q 019662          162 VESKLPCSLEELYSGSTRKMKISRTVV----DA-----------------NGR---------------------------  193 (337)
Q Consensus       162 ~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g-----------------~G~---------------------------  193 (337)
                      +.+++.|||+|+|+|+++++.+.+.+.    .|                 .|.                           
T Consensus       122 i~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~  201 (378)
T PRK14283        122 IYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKI  201 (378)
T ss_pred             eEEEeeeeHHHHhCCcceEEEeeeeccCCCCCccccCCCCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCCcccee
Confidence            999999999999999999998875532    11                 111                           


Q ss_pred             ------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeCCCccccCCCceEEEEeeCHH
Q 019662          194 ------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLA  260 (337)
Q Consensus       194 ------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~  260 (337)
                                  ++.+.++++|.||||+++|++|+|+|+|++.+ ++.+|||+|+|+|++|+.|+|+|+||+++++|||.
T Consensus       202 ~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~  281 (378)
T PRK14283        202 VEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFV  281 (378)
T ss_pred             cCCCCCCCCCceeeccceeEEEEECCCCCCCcEEEEeccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHH
Confidence                        24566899999999999999999999999964 56789999999999999999999999999999999


Q ss_pred             HHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662          261 EALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG  336 (337)
Q Consensus       261 eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~  336 (337)
                      +|++|+++.|+|+|| ++.|.||+++++|+++||+|+|||... ...+|||||+|+|.||+.|+++|+++|++++.
T Consensus       282 eAl~G~~~~i~tldG-~i~v~ip~g~~~g~~~ri~g~G~p~~~-~~~~GdL~v~~~v~~P~~l~~~q~~ll~~~~~  355 (378)
T PRK14283        282 QAALGDTVDVPTIDG-PVELKIPAGTQSGTTFRLKGHGMPSLR-WSGKGNLYVKVKVVVPKKLSPKQKELLREFAS  355 (378)
T ss_pred             HHhcCCeEEEEcCCc-eEEEEeCCCCCCCCEEEECCCCCCCCC-CCCCCCEEEEEEEEeCCCCCHHHHHHHHHHHh
Confidence            999999999999999 589999999999999999999999765 34689999999999999999999999999874

>PRK14293 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.4e-61  Score=463.57  Aligned_cols=292  Identities=32%  Similarity=0.566  Sum_probs=240.5

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662            1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS   80 (337)
Q Consensus         1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~   80 (337)
                      |..|||+||||+++||.+|||+|||+||++||||+|++  +.|+++|++|++||++|+||.+|++||+||++++.++   
T Consensus         1 ~~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~--~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~---   75 (374)
T PRK14293          1 MAADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKE--PGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGA---   75 (374)
T ss_pred             CCCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--cCHHHHHHHHHHHHHHHhchHHHHHHhhccccccccC---
Confidence            78999999999999999999999999999999999986  3588999999999999999999999999999876521   


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCC
Q 019662           81 SSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP  160 (337)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (337)
                        .+++.++       .+  .++.|+|++|||+  |+  +.+             + .+  .+ .      ....+.+++
T Consensus        76 --~~~~~~~-------~~--~~~~d~f~~~fg~--~~--~~~-------------~-~~--~~-~------~~~~~~kg~  117 (374)
T PRK14293         76 --AGFPDMG-------DM--GGFADIFETFFSG--FG--GAG-------------G-QG--GR-R------RRRGPQRGD  117 (374)
T ss_pred             --CCcCCcc-------cc--cchHHHHHHHhcc--cC--CCC-------------C-CC--cc-c------cccCccCCC
Confidence              0110000       11  1356899999973  11  000             0 00  00 0      011235688


Q ss_pred             CeeeeeeechhhheeCceEEEEEEEEEE----c-----------------CCCe--------------------------
Q 019662          161 PVESKLPCSLEELYSGSTRKMKISRTVV----D-----------------ANGR--------------------------  193 (337)
Q Consensus       161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~-----------------g~G~--------------------------  193 (337)
                      |+.+.+.|||+|+|+|+++++.+.+.+.    +                 |.|.                          
T Consensus       118 di~~~l~vsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~  197 (374)
T PRK14293        118 DLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQ  197 (374)
T ss_pred             CeEEEEEeeHHHHhCCceEEEEeeccccCCCCCCcCCCCCCCCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCccee
Confidence            9999999999999999999998875421    1                 1111                          


Q ss_pred             -------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeCCCccccCCCceEEEEeeCH
Q 019662          194 -------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSL  259 (337)
Q Consensus       194 -------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl  259 (337)
                                   ++.+.++++|.||||+++|++|+|+|+|++.. +..+|||+|+|++++|+.|+|+|+||+++++|||
T Consensus       198 ~~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl  277 (374)
T PRK14293        198 VIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISY  277 (374)
T ss_pred             EeccCCCCCCCCcccccceEEEEEeCCCCCCCCEEEEccCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCH
Confidence                         23456788999999999999999999999864 5668999999999999999999999999999999


Q ss_pred             HHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662          260 AEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG  336 (337)
Q Consensus       260 ~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~  336 (337)
                      .||++|+++.|+|+||+ ++|+||+++++|+++||+|+|||..+..+.+|||||+|+|.||+.|+++|+++|+++|.
T Consensus       278 ~eAl~G~~~~i~~ldG~-~~i~ip~~~~~g~~~ri~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~l~~  353 (374)
T PRK14293        278 LQAILGDTLEVDTVDGP-VELTIPAGTQPNTVLTLENKGVPRLGNPVARGDHLITVKVKIPTRISDEERELLEKLAK  353 (374)
T ss_pred             HHHhCCCEEEecCCCCC-EEEEeCCCCCCCCEEEECCCCCCCCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            99999999999999997 89999999999999999999999765444689999999999999999999999999874

>PRK14292 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.4e-60  Score=458.52  Aligned_cols=285  Identities=34%  Similarity=0.590  Sum_probs=238.0

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCC
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSS   81 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~   81 (337)
                      +.|||++|||+++|+.+|||+|||+||++||||+|++  ++|+++|++|++||++|+||.+|+.||+||+++..+.    
T Consensus         1 ~~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~--~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~----   74 (371)
T PRK14292          1 MMDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE--KGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGM----   74 (371)
T ss_pred             CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--hhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccc----
Confidence            3799999999999999999999999999999999985  4689999999999999999999999999998763210    


Q ss_pred             CCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCCC
Q 019662           82 SSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPP  161 (337)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  161 (337)
                      . +.+.|+     ++.|   ++.|+|+.|||+..++  +                  .  .+         ...+.++.|
T Consensus        75 ~-~~~~~~-----~~~~---d~~d~f~~~fg~~~~~--~------------------~--~~---------~~~~~~g~d  114 (371)
T PRK14292         75 P-GGDPFG-----GMGF---DPMDIFEQLFGGAGFG--G------------------G--RG---------RRGPARGDD  114 (371)
T ss_pred             c-CCcccC-----ccCC---ChHHHHHHhhCCCCcC--C------------------C--CC---------cccccCCCC
Confidence            0 000111     1122   5679999999842111  0                  0  00         012346889


Q ss_pred             eeeeeeechhhheeCceEEEEEEEEEE----cC------------------CCe--------------------------
Q 019662          162 VESKLPCSLEELYSGSTRKMKISRTVV----DA------------------NGR--------------------------  193 (337)
Q Consensus       162 ~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g------------------~G~--------------------------  193 (337)
                      +++.+.|||+|+++|+++++.+.+.+.    +|                  .|.                          
T Consensus       115 ~~~~l~~sLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~  194 (371)
T PRK14292        115 LETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQ  194 (371)
T ss_pred             eEEEEeccHHHHcCCeEEEEEEEeeecCCCCcccccCCCCCCCccCCCCCCccEEEEEEeccCceEEEeeecCCCcccce
Confidence            999999999999999999999876432    11                  111                          


Q ss_pred             -------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEEEEeeCCCccccCCCceEEEEeeCHH
Q 019662          194 -------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLA  260 (337)
Q Consensus       194 -------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~  260 (337)
                                   ++.+.++++|.||+|+.+|++|+|+|+|++.+++. |||||+|++++|+.|+|+|+||++.++|||.
T Consensus       195 ~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~G~G~~~~~~~-GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~  273 (371)
T PRK14292        195 IITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRVAGMGNEGPGGN-GDLYVHIEMEPHPELRREQEHLIYEARIGFA  273 (371)
T ss_pred             ecCCCCCCCCCceEEeecceEEEEECCCCCCCcEEEEecCcCCCCCCC-CCEEEEEEEecCCccccchhceeEEeccCHH
Confidence                         23456789999999999999999999999987665 9999999999999999999999999999999


Q ss_pred             HHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019662          261 EALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL  335 (337)
Q Consensus       261 eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l  335 (337)
                      +|++|+++.|+|++|+ +.|.||+++++|++++|+|+|||..+ ...+|||||+|+|.+|+.|+++|+++|++++
T Consensus       274 eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~~~i~g~G~p~~~-~~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~  346 (371)
T PRK14292        274 KAALGGQITVPTLDGP-QVIEVKPGTQHGDLHRLRGQGMPRLQ-GAGTGDLIVEYEIAVPKQLSPEAREALEAYA  346 (371)
T ss_pred             HHhCCCeEEEECCCCC-EEEecCCCcCCCcEEEECCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            9999999999999997 58999999999999999999999765 3468999999999999999999999999987

>PRK14289 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.3e-59  Score=455.39  Aligned_cols=296  Identities=36%  Similarity=0.607  Sum_probs=237.8

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCC
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSS   81 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~   81 (337)
                      .+|||++|||+++|+.+|||+|||+||++||||+|+.+ ++|+++|++|++||++|+||.+|++||+||+++++.+..  
T Consensus         4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~~~~~--   80 (386)
T PRK14289          4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGD-KEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAG--   80 (386)
T ss_pred             cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC-hHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccccCCC--
Confidence            57999999999999999999999999999999999876 478999999999999999999999999999987653210  


Q ss_pred             CCCCCCCCCCCCCCCCCCCCchhHHHHhh---hCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCC
Q 019662           82 SSGYSYANGSGGNSKGFNPRNAEDIFAEF---FGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRK  158 (337)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~d~f~~~---fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (337)
                      .   ++|.+.     .   .++.++|+.|   |++. |+  +.+             +...  ++.+.     ....+.+
T Consensus        81 ~---~~~~~~-----~---~~~~~~f~~f~~~fg~~-~g--g~~-------------~~~~--~~~~~-----~~~~~~~  126 (386)
T PRK14289         81 G---GGFSGE-----G---MSMEDIFSMFGDIFGGH-GG--GFG-------------GFGG--FGGGG-----SQQRVFR  126 (386)
T ss_pred             C---CCCCCC-----C---cChhhhhHHhhhhhccc-cc--Ccc-------------cccc--ccccc-----ccCCCCC
Confidence            0   011100     1   1334454443   5421 11  000             0000  00000     0112346


Q ss_pred             CCCeeeeeeechhhheeCceEEEEEEEEEE----cCCC-----------------e------------------------
Q 019662          159 PPPVESKLPCSLEELYSGSTRKMKISRTVV----DANG-----------------R------------------------  193 (337)
Q Consensus       159 ~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g~G-----------------~------------------------  193 (337)
                      +.|+++.+.|||+|+|+|+++++.+.+.+.    +|+|                 .                        
T Consensus       127 g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~  206 (386)
T PRK14289        127 GSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGE  206 (386)
T ss_pred             CCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCcc
Confidence            889999999999999999999998876532    1111                 1                        


Q ss_pred             ---------------eeecceEEEEEeCCCCcCCCEEEECCCCCCC-CCCCCccEEEEEEeeCCCccccCCCceEEEEee
Q 019662          194 ---------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQ-PNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKV  257 (337)
Q Consensus       194 ---------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~-~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I  257 (337)
                                     ++.+.++++|.||+|+++|++|+|+|+|++. .+..+|||+|+|++++|+.|+|+++||++++.|
T Consensus       207 G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~I  286 (386)
T PRK14289        207 GKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLL  286 (386)
T ss_pred             ccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEecc
Confidence                           3456678999999999999999999999987 466789999999999999999999999999999


Q ss_pred             CHHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662          258 SLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG  336 (337)
Q Consensus       258 sl~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~  336 (337)
                      ||.+|++|+++.|+|++|+ ++|.||+++++|+++||+|+|||..+ ...+|||||+|+|.||+.|+++|+++|++++.
T Consensus       287 sl~eAl~G~~~~i~~ldg~-i~v~ip~g~~~g~~~ri~g~G~p~~~-~~~~GDL~v~~~v~~P~~l~~~q~~~l~~l~~  363 (386)
T PRK14289        287 SVPTAALGGAVEVPTIDGK-AKVKIEAGTQPGKVLRLRNKGLPSVN-GYGTGDLLVNVSVYIPETLSKEEKQTLEKMEN  363 (386)
T ss_pred             CHHHHhCCCeEEeecCCce-EEEEECCccCCCcEEEECCCCcCCCC-CCCCCcEEEEEEEEeCCCCCHHHHHHHHHHHh
Confidence            9999999999999999996 89999999999999999999999765 34689999999999999999999999999984

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=5.7e-58  Score=424.75  Aligned_cols=271  Identities=48%  Similarity=0.811  Sum_probs=234.9

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCC
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSS   81 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~   81 (337)
                      +..||+||+|+++||++|||+|||+||++||||+||+    +.++|++|++||||||||+||++||+||+++++.+..+ 
T Consensus         3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~----~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~-   77 (337)
T KOG0712|consen    3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD----AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGG-   77 (337)
T ss_pred             ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc----HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCC-
Confidence            4689999999999999999999999999999999997    67999999999999999999999999999998653111 


Q ss_pred             CCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCCC
Q 019662           82 SSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPP  161 (337)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  161 (337)
                               ++     +.  .    |++||+   |+  +.                     +         .+.+.+++|
T Consensus        78 ---------~g-----~~--~----f~~~F~---~g--~~---------------------~---------~~~~~rg~~  102 (337)
T KOG0712|consen   78 ---------GG-----FG--G----FSQFFG---FG--GN---------------------G---------GRGRQRGKD  102 (337)
T ss_pred             ---------CC-----Cc--c----HHHhcc---CC--Cc---------------------C---------ccccccCCC
Confidence                     11     10  1    888887   22  00                     0         011233899


Q ss_pred             eeeeeeechhhheeCceEEEEEEEEEEc----CC-------------------------------------------C--
Q 019662          162 VESKLPCSLEELYSGSTRKMKISRTVVD----AN-------------------------------------------G--  192 (337)
Q Consensus       162 ~~~~l~vsl~e~~~G~~~~i~~~r~~~~----g~-------------------------------------------G--  192 (337)
                      +.+.+.|||+|+|.|.++++.+.++.++    |.                                           |  
T Consensus       103 ~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsGgksg~~~~C~~C~GsGv~~~~~~~gPg~~qs~q~~C~~C~G~G~~  182 (337)
T KOG0712|consen  103 VVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSGGKSGSAPKCTTCRGSGVQTRTRQMGPGMVQSPQLVCDSCNGSGET  182 (337)
T ss_pred             ceEEEEEEHHHhhcCCccceecccCccCCcCCCCCCCCCCCCCCCCCCCCCceeEEEeccccccccceeEeccCCCcccc
Confidence            9999999999999998888877765431    11                                           1  


Q ss_pred             -------------eeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEEEEeeCCCccccCCCceEEEEeeCH
Q 019662          193 -------------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSL  259 (337)
Q Consensus       193 -------------~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl  259 (337)
                                   .++.+.+.++|.|++|+.+++.|.+.|++++.++..+||+++.|..++|+.|.|.++||+++.+|+|
T Consensus       183 ~~~kd~C~~C~G~~~v~~kkil~v~V~~g~~~~~ki~f~geadea~g~~pgD~vl~i~~k~h~~F~Rrg~dL~~~~~i~l  262 (337)
T KOG0712|consen  183 ISLKDRCKTCSGAKVVREKKILEVHVEPGMPHGQKITFKGEADEAPGTKPGDVVLLIDQKEHPGFDRRGSDLYRKLTISL  262 (337)
T ss_pred             ccccccCcccccchhhhhhheeeccccCCCcccceeeeeeeeeecCCCcCccEEEEecccccccceecccccceeeecch
Confidence                         0467788999999999999999999999999998889999999999999999999999999999999


Q ss_pred             HHHhCCcEEEEecCCCcEEEEEcCC--CCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019662          260 AEALGGTSVSLITLDGRDLNIAVTD--IISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL  335 (337)
Q Consensus       260 ~eAl~G~~~~i~~l~g~~~~v~i~~--~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l  335 (337)
                      .||++|+.+.+.|+||+.+++.+++  ++++|.+++|+|+|||..+++  +|||||+|.|+||+ +++++...|+.+|
T Consensus       263 ~eal~G~~~~~~~ldGr~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~--~g~lyi~~~v~fp~-~~~~~~~~l~~~l  337 (337)
T KOG0712|consen  263 VEALCGFQRVWETLDGRLLKLSSKPGEVISPGDTKRVEGEGMPIFRNP--KGDLYIKFEVKFPK-LSPSQLKMLEDLL  337 (337)
T ss_pred             hhccccceEEEEccCCceEEEecCCCceeChhHEEeecCCCcccccCC--CCcEEEEEEEEcCC-CChHHHHHHHhhC
Confidence            9999999999999999999998854  799999999999999999854  99999999999999 9999999999876

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=100.00  E-value=4e-42  Score=342.10  Aligned_cols=154  Identities=17%  Similarity=0.207  Sum_probs=138.2

Q ss_pred             eeeeechhhheeCceEEEEEEEEEEcCCC-eeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEEEEeeCCC
Q 019662          164 SKLPCSLEELYSGSTRKMKISRTVVDANG-RQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHD  242 (337)
Q Consensus       164 ~~l~vsl~e~~~G~~~~i~~~r~~~~g~G-~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~  242 (337)
                      +.+.|+|+++|+||+++|++.|.+|++.| +.+.+.++++|+||||+++|++|+|+|+|+..+++. |||+|+|++++|+
T Consensus       661 y~l~vtLEeLY~G~tKkIKitR~V~~g~G~ktvkE~ktLeVkIPpGVkdGqkIRf~GeGDegpgg~-GDLyVvIkVKPHp  739 (871)
T TIGR03835       661 YEEEVPQILFFNNQIKEIKYTRHTVDGNTESTTNEAITLEIQLPITSQLNISAIFKGFGHDFGNGC-GDLKVVFKVIPSN  739 (871)
T ss_pred             EecccCHHHHhCCCeEEEEEEEeeccCCCcceeeeeEEEEEecCCCCCCCCEEEeccccCCCCCCC-CCEEEEEEEcCCC
Confidence            46777888899999998888888887666 345667899999999999999999999999876654 9999999999999


Q ss_pred             ccccCCCceEEEEeeCHHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEE-CCC
Q 019662          243 VYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVK-FPT  321 (337)
Q Consensus       243 ~f~r~g~dL~~~~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~-~P~  321 (337)
                      .|+|+|+||+++++|+|.+||+|+++.|+||||+ +.|+||+++++|+++||+|+|||...  +.+|||||+|+|. +++
T Consensus       740 ~FrRdGdDL~~~v~ISL~EALLGgtIeIpTLDGr-VkLkIPpgTqpGqvLRIkGKGMP~~~--~~RGDLyV~f~V~~~~k  816 (871)
T TIGR03835       740 FFQIKNDGLHVAALVDPLVAYNGGIIDVFGPNKL-FNVRIPGGIKVNDQVIFKDLGLTKTK--YDKGSLIVHLYYSSVMK  816 (871)
T ss_pred             CeEEECCeEEEEEecCHHHHhcCCEEEeeCCCCC-EEEeeCCCCCCCcEEEECCCCCCCCC--CCCCCEEEEEEEeeccc
Confidence            9999999999999999999999999999999997 89999999999999999999999543  5689999999995 455

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=1.4e-43  Score=324.86  Aligned_cols=278  Identities=39%  Similarity=0.682  Sum_probs=223.8

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCC
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSS   81 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~   81 (337)
                      ++|||+||||+++|+..|||+||||||++||||+||++ +.|.+.|++|+.||||||||.+|+.||+||++++....-..
T Consensus        15 ~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpdd-p~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~~~~   93 (336)
T KOG0713|consen   15 GRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDD-PNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDENKDG   93 (336)
T ss_pred             CCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-HHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhccccccc
Confidence            58999999999999999999999999999999999998 58999999999999999999999999999999997531000


Q ss_pred             CCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCCC
Q 019662           82 SSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPP  161 (337)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  161 (337)
                      .       ++.         ...++|+.||+.  |+.+                      +++.     .......++.+
T Consensus        94 ~-------~g~---------~~~~~f~~~f~d--fg~~----------------------~~g~-----~~~e~~~~g~~  128 (336)
T KOG0713|consen   94 E-------GGG---------GGNDIFSAFFGD--FGVT----------------------VGGN-----PLEEALPKGSD  128 (336)
T ss_pred             c-------cCC---------cccchHHHhhcc--cccc----------------------cCCC-----cccCCCCCCce
Confidence            0       010         115788888874  2110                      0000     00122456778


Q ss_pred             eeeeeeechhhheeCceEE----------EEEEEEEE---------cCCC----------------eeeecceEEEEEeC
Q 019662          162 VESKLPCSLEELYSGSTRK----------MKISRTVV---------DANG----------------RQTPESEILTIDVK  206 (337)
Q Consensus       162 ~~~~l~vsl~e~~~G~~~~----------i~~~r~~~---------~g~G----------------~~~~~~~~~~V~Ip  206 (337)
                      +...++.+++++|.|...+          +...+.++         .+.|                +.+.++..+++.+.
T Consensus       129 V~~~~e~~~~h~y~~~~~e~~r~~~v~~~~~g~~~~~~~~~~~~~~~~~g~~~~~q~~~~~~~~~~k~~~e~~~~~~~~~  208 (336)
T KOG0713|consen  129 VSSDLEKQLEHFYMGNFVEEVREKGVYKPAPGTRKCNCRLEMFTQQEGPGRFQMLQEAVCDECPNVKLVLEEDPLEVEFE  208 (336)
T ss_pred             EEeehhhchhhhhcccHHHHHhccCceeecCcccccCChhhheeeccCCChhhhhhhhhhccCCccceeecCCceeeeee
Confidence            8888888888888775321          11111111         0112                14677889999999


Q ss_pred             CCCcCCCEEEECCCCCCCCCCCCccEEEEEEeeCCCccccCCCceEEEEeeCHHHHhCCcEEEEecCCCcEEEEEcCCCC
Q 019662          207 PGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDII  286 (337)
Q Consensus       207 ~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~~  286 (337)
                      .|...+....+..+|.+..-+.+||+++++...+|+.|.|++.++++++.+++.+++.|+...+.++|+..+.+....++
T Consensus       209 ~~~~~~~~~~~~~~~~~h~~~~~gD~~f~~~~y~~~~~~~k~~~~~~n~~~sl~~~~v~~~~e~~~~d~~~~~~~r~~~~  288 (336)
T KOG0713|consen  209 RGDADGPEEIFELEGEPHIDGVPGDLFFKIVSYTHPRFERKGDDLYTNVTISLEAALVGFEMEILHLDGHYVEVSRKKIT  288 (336)
T ss_pred             ecccCCceeeeeccCCcceecccCCceeeeEEecccceecCccchhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhhcc
Confidence            99999999999999998888899999999999999999999999999999999999999999999999987788888899


Q ss_pred             CCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCC-CCH
Q 019662          287 SPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTK-LTP  325 (337)
Q Consensus       287 ~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~-l~~  325 (337)
                      .++..++.+++|||........|++|++|.+.+|.+ ++.
T Consensus       289 ~p~~~~~~~~~~~~~l~~~~~~~~~~~t~~~~~~~~~~~~  328 (336)
T KOG0713|consen  289 WPGARTRKKGEGMPLLKNRNEKGNLYVTFDVEFPKSSLSD  328 (336)
T ss_pred             ccchhhhhhhccchhhhccchhcceeEEecccCcccccch
Confidence            999999999999997766678999999999999965 454

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.96  E-value=2.1e-28  Score=227.18  Aligned_cols=218  Identities=29%  Similarity=0.439  Sum_probs=143.3

Q ss_pred             CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCCCC
Q 019662            4 DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSSSS   83 (337)
Q Consensus         4 ~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~~~   83 (337)
                      |||+||||+++|+.+|||+||++||++||||.|.+.  +|.++|++|.+|||+|+|++||+.||++|..+...       
T Consensus        44 d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~--~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~~~~-------  114 (288)
T KOG0715|consen   44 DYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDK--EASKKFKEISEAYEILSDEEKRQEYDVYGLEQHGE-------  114 (288)
T ss_pred             chhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCc--chhhHHHHHHHHHHHhcCHHHHHHHHHhhhhcccc-------
Confidence            899999999999999999999999999999999985  79999999999999999999999999998765110       


Q ss_pred             CCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCC-CCCCCCC--CccccccCCCCCcCCCCCCcCc-cccc-CCCCCCCC
Q 019662           84 GYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFG-FGSAGPG--KSTRFQSEGGGTFGGFGMGENI-FRTY-SDGSVPRK  158 (337)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~  158 (337)
                                    +. .++.++|..+|+++-+. ..+....  ....++.+.        ++... .... ...-....
T Consensus       115 --------------~~-g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~f~~A~--------~g~~~~~~~~~~~~~~t~~  171 (288)
T KOG0715|consen  115 --------------FG-GNPFDVFLEFFGGKMNKRVPDKDQYYDLSLDFKEAV--------RGSKKRISFNVLSDCETCF  171 (288)
T ss_pred             --------------cc-CCccchHHHhhcccccccccCcccccccccCHHHHh--------hccccceEEEeeccccccc
Confidence                          00 15667777777651000 0000000  000111110        00000 0000 00000011


Q ss_pred             CCCeeeeeeechhhhe----------------------eCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEE
Q 019662          159 PPPVESKLPCSLEELY----------------------SGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKIT  216 (337)
Q Consensus       159 ~~d~~~~l~vsl~e~~----------------------~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~  216 (337)
                      +..........-+.+|                      .|....+.-.|..|.|+| .+...+.+.|.+|+|+.++.+|+
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~~~~c~~~~g~~-~v~~~k~i~i~~~~g~~~~~~l~  250 (288)
T KOG0715|consen  172 GSGAEEGAKRESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGLVLRDNCQACSGAG-QVRRAKDIMIVLPAGVRSADTLR  250 (288)
T ss_pred             CcCcccccccccchhhhCcccccccccCCcceeecccccccceeccchHHHhhcch-hhhhheeEEeecCcccccccEEE
Confidence            1111111111122222                      222222222233445667 77888999999999999999999


Q ss_pred             ECCCCCCCCCCCCccEEEEEEeeCCCccccCCCceEEEEeeCHHH
Q 019662          217 FPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAE  261 (337)
Q Consensus       217 l~g~G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~e  261 (337)
                      +.+.|..       ||+|.+.|.+++.|+|+|.|+++...|++.+
T Consensus       251 ~~~~~~~-------~l~v~~~v~~~~~~~r~~~~i~~~~~i~~~~  288 (288)
T KOG0715|consen  251 FAGHGND-------DLFVRLIVAKSPSFRREGKDILYDAIISFTQ  288 (288)
T ss_pred             EecCCcc-------eEEEEEEeccCcccccccCcccccccccccC
Confidence            9998864       9999999999999999999999999998753

>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.95  E-value=3.2e-27  Score=220.02  Aligned_cols=294  Identities=51%  Similarity=0.794  Sum_probs=215.0

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662            1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS   80 (337)
Q Consensus         1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~   80 (337)
                      |+.|||++|+|.++|+.++|++|||+||++||||+|+.+...++++|++|.+||++|+|+.+|..||+||++++.+....
T Consensus         1 ~~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~~~~~~   80 (306)
T KOG0714|consen    1 MGKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLKGGGSF   80 (306)
T ss_pred             CcccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCccccccCCCC
Confidence            78999999999999999999999999999999999988633566689999999999999999999999999766541100


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCchhHHHHhhhC-CCCCCCCCCCCC-CccccccCCCCCcCCCC-CCcCccc-cc---CCC
Q 019662           81 SSSGYSYANGSGGNSKGFNPRNAEDIFAEFFG-SSPFGFGSAGPG-KSTRFQSEGGGTFGGFG-MGENIFR-TY---SDG  153 (337)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg-~~~f~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~-~~---~~~  153 (337)
                          .+.+...   .+.+...++.++|.+||| .+++........ ................. ...+... ..   ...
T Consensus        81 ----~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (306)
T KOG0714|consen   81 ----SSSFTSE---LFYFLFRKPDKDFYEFFGVSSPFSGSKKGYRDKNAAPGEEAFKSEGKAFQSLYGPKRKQYDSSGSD  153 (306)
T ss_pred             ----CCCCCCC---cceeccCchhhhHHHHhCCCCCCccccccCCccccccCccccccccccccccCCCccccccccccc
Confidence                0001100   112333577899999999 455431100000 00000000000000000 0000000 00   001


Q ss_pred             CCCCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCee-eecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccE
Q 019662          154 SVPRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQ-TPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADL  232 (337)
Q Consensus       154 ~~~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~-~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL  232 (337)
                      ...++...+...+.+++++.+.|+.+...+.+......+.. ........+.+.+++..|+.+....+|+..++..+-++
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  233 (306)
T KOG0714|consen  154 RSARQSPPVEHPLRVSLEDLYKGESKKMKISRQSFTSNGREGSSRSRYLSISIKPGWKEGTKITFPEEGDEEPGILPADI  233 (306)
T ss_pred             ccccCCCCccCCcceeHHHhccccceeeecccccccCCcccccCccceeEEeccCCcccccceeccccccccCCcCccee
Confidence            11233344666677799999999999999998877666643 45667889999999999999999999998877778999


Q ss_pred             EEEEEeeCCCccccCCCceEEE--EeeCHHHHhCCcEEEEecCCCcEEEEEcC-CCCCCCcEEEEcCCCcCC
Q 019662          233 VFVIDEKPHDVYKRDSNDLIVN--HKVSLAEALGGTSVSLITLDGRDLNIAVT-DIISPGFELGIPGEGMPI  301 (337)
Q Consensus       233 ~v~i~v~~~~~f~r~g~dL~~~--~~Isl~eAl~G~~~~i~~l~g~~~~v~i~-~~~~~g~~~rl~g~G~p~  301 (337)
                      ++.+..++|+.|.+.+.+|...  ..|++.+|++|+...++++++..+.+.+. ..+.++...+++++|+|.
T Consensus       234 ~f~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (306)
T KOG0714|consen  234 EFVVDEKPHPLFSRDGNDLSYSSGYEISLKEALLGVTVFVPTLDGRSYSLSINKDLIEPGEEDVIPGEGLPC  305 (306)
T ss_pred             EEEEecCCcccccCCCccceecccceeehhhhhcCcceeeecccCccccCcccccccCCCceeeecCCCCCC
Confidence            9999999999999999999999  99999999999999999999988877777 788999999999999985

>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=99.88  E-value=1.5e-22  Score=153.80  Aligned_cols=81  Identities=47%  Similarity=0.760  Sum_probs=70.5

Q ss_pred             ceEEEEeeCHHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHH
Q 019662          250 DLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRA  329 (337)
Q Consensus       250 dL~~~~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~  329 (337)
                      ||+++++|||+||++|++++|+|+||+.++|++|+++++|++++|+|+|||...+++.+|||||+|+|.+|++||++|++
T Consensus         1 DL~~~~~I~l~~al~G~~i~i~~l~g~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~qk~   80 (81)
T PF01556_consen    1 DLYCTIPISLKEALLGGTISIPTLDGKTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKLSPEQKE   80 (81)
T ss_dssp             EEEEEEEEEHHHHHH-EEEEEE-TTS-EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SSTSHHHHH
T ss_pred             CeEEEEEeCHHHHhCCCEEEEECCCCCEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHhc
Confidence            79999999999999999999999999889999999999999999999999988755589999999999999999999987


Q ss_pred             H
Q 019662          330 G  330 (337)
Q Consensus       330 ~  330 (337)
                      |
T Consensus        81 l   81 (81)
T PF01556_consen   81 L   81 (81)
T ss_dssp             H
T ss_pred             C
Confidence            5

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....

>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.82  E-value=7.5e-21  Score=169.92  Aligned_cols=72  Identities=57%  Similarity=1.028  Sum_probs=68.7

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccC
Q 019662            3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLK   75 (337)
Q Consensus         3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~   75 (337)
                      .|+|+||||+++|+.++||+|||+||++||||+++++ +++.++|++||.||+||+|+.+|..||.||+.++.
T Consensus        31 ~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~-P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l~  102 (279)
T KOG0716|consen   31 LDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDN-PEATDKFKEINTAYAILSDPTKRNVYDEYGELGLK  102 (279)
T ss_pred             hHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCC-chhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHHH
Confidence            5799999999999999999999999999999999998 58999999999999999999999999999988765

>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=99.81  E-value=1.6e-18  Score=154.50  Aligned_cols=225  Identities=27%  Similarity=0.400  Sum_probs=144.6

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhccc-ccccCCCCC
Q 019662            1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYG-EEGLKDMPP   79 (337)
Q Consensus         1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G-~~~~~~~~~   79 (337)
                      |..+||+||||+++|+..||++|||++|++||||+++.+...+.++|+.|++||++|+|+.+|+.||+++ .........
T Consensus         4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~~~~~~~~~~~   83 (237)
T COG2214           4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIGADNYFPGKSY   83 (237)
T ss_pred             hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhcccccCccccc
Confidence            4579999999999999999999999999999999999864248999999999999999999999999984 322211100


Q ss_pred             CCCCCCCCCCCCCCCCCCCCC-CchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcC-cccccCCCCCCC
Q 019662           80 SSSSGYSYANGSGGNSKGFNP-RNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGEN-IFRTYSDGSVPR  157 (337)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~-~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  157 (337)
                      . .  ..        .+.... ....+++...++..... .... . ........   .... .... ............
T Consensus        84 ~-~--~~--------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~-~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~  145 (237)
T COG2214          84 R-E--SA--------AFPIEGSLQLTGLYEEWRGKRNKT-ERKA-S-LADLLSRG---LSGL-AAALSLFADEAALRSGS  145 (237)
T ss_pred             c-c--cc--------cccccccccHHHHHHhhccccccc-cccc-c-hhhhcccc---cccc-ccccccccccccccccc
Confidence            0 0  00        011111 13455555555421100 0000 0 00000000   0000 0000 000000000000


Q ss_pred             CCC-CeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEEE
Q 019662          158 KPP-PVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVI  236 (337)
Q Consensus       158 ~~~-d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i  236 (337)
                      ... +....+.+++.+++.+....+...      ..      ....+.+|.++..+..+++.+.+.... ...++.+..+
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  212 (237)
T COG2214         146 LRRRDLAANLADNFEEALAGVKKAVARL------LG------KALKSTIKAGALEGKALRLKGLLKSAR-GALGKARLKE  212 (237)
T ss_pred             ccccceeeeeeccHHHHhcCcceeeecc------cc------ccccccCCcccccCceeeecccCCcCC-CCcccceeee
Confidence            111 577788889999998887766654      22      233489999999999999999998877 7789999999


Q ss_pred             EeeCCCccccCCCceEEEEeeCH
Q 019662          237 DEKPHDVYKRDSNDLIVNHKVSL  259 (337)
Q Consensus       237 ~v~~~~~f~r~g~dL~~~~~Isl  259 (337)
                      .+++|+.|..++.++   .++.+
T Consensus       213 ~~~~~~~~~~~~~~~---~~~~~  232 (237)
T COG2214         213 LSKRHPPFALEGDDK---YPVKL  232 (237)
T ss_pred             eccCCCCccccCCcc---cccch
Confidence            999999999999998   44444

>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.80  E-value=4.1e-20  Score=175.25  Aligned_cols=78  Identities=49%  Similarity=0.809  Sum_probs=73.2

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCC
Q 019662            1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMP   78 (337)
Q Consensus         1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~   78 (337)
                      |++.||+||||.++|++.+||++||+|||+||||+||...++|.++|+.|+.||+|||||+.|+-||.+-++.|.+..
T Consensus         6 ~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreqil~~~~   83 (508)
T KOG0717|consen    6 KKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQILRGKN   83 (508)
T ss_pred             hhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHHHhcCCC
Confidence            578999999999999999999999999999999999998889999999999999999999999999998887776543

>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.80  E-value=6.8e-20  Score=169.13  Aligned_cols=93  Identities=45%  Similarity=0.815  Sum_probs=80.8

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCC
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSS   81 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~   81 (337)
                      ..|||++|||+.+|+.+||++|||+.|++||||+||+++ .|.++|+.+.+||+||+|+.+|+.||++|..+....    
T Consensus         4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP-~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~~----   78 (296)
T KOG0691|consen    4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDP-QAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSAQ----   78 (296)
T ss_pred             cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCh-HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccch----
Confidence            479999999999999999999999999999999999996 599999999999999999999999999998654321    


Q ss_pred             CCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCC
Q 019662           82 SSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPF  116 (337)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f  116 (337)
                                     .+  .++.++|...|++..|
T Consensus        79 ---------------~~--~d~~~~~r~~f~~dl~   96 (296)
T KOG0691|consen   79 ---------------GR--EDQADGFRKKFGSDLF   96 (296)
T ss_pred             ---------------hh--hhHHHHHHHHhhhhhh
Confidence                           01  3678888888886444

>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.79  E-value=7.4e-20  Score=173.60  Aligned_cols=73  Identities=56%  Similarity=1.026  Sum_probs=68.5

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccC
Q 019662            3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNP--NDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLK   75 (337)
Q Consensus         3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~--~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~   75 (337)
                      .|||.+|+|+++||.+||++|||++++-||||+.-  +.++.|+++|+.|.+||||||||++|++||.||++|++
T Consensus         9 ~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~   83 (546)
T KOG0718|consen    9 IELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLK   83 (546)
T ss_pred             hhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcccc
Confidence            58999999999999999999999999999999975  33467899999999999999999999999999999998

>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional

Probab=99.79  E-value=1.6e-19  Score=184.89  Aligned_cols=73  Identities=36%  Similarity=0.675  Sum_probs=68.0

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCC
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKD   76 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~   76 (337)
                      .++||+||||+++||.++||+|||+||++||||+|+.+  .|.++|+.|++||+|||||.+|+.||+||..++..
T Consensus       572 d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~--~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~~  644 (1136)
T PTZ00341        572 DTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN--EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKG  644 (1136)
T ss_pred             CCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc--hHHHHHHHHHHHHHHhCCHHHHHHHhhccccccCC
Confidence            47999999999999999999999999999999999874  57889999999999999999999999999887653

>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []

Probab=99.76  E-value=8.4e-19  Score=127.04  Aligned_cols=64  Identities=48%  Similarity=0.929  Sum_probs=60.5

Q ss_pred             CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhh
Q 019662            4 DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYD   67 (337)
Q Consensus         4 ~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD   67 (337)
                      |||+||||+++|+.++|++||+++++++|||+++.+...+.+.|..|++||++|+||.+|+.||
T Consensus         1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD   64 (64)
T PF00226_consen    1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD   64 (64)
T ss_dssp             HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred             ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence            6899999999999999999999999999999988764468999999999999999999999998

Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....

>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.74  E-value=1.7e-18  Score=151.35  Aligned_cols=72  Identities=44%  Similarity=0.822  Sum_probs=65.7

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHhhcCChhhhhhhhccccc
Q 019662            1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPND-KKEAEARFKQISEAYEVLSDPQKRAIYDQYGEE   72 (337)
Q Consensus         1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~   72 (337)
                      |-+|+|+||||.++|+..+|++|||+||++||||++++. ..+|.++|+.++.||.||+|.++|++||+.|.-
T Consensus        12 ~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~i   84 (264)
T KOG0719|consen   12 NKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSI   84 (264)
T ss_pred             cccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCC
Confidence            346999999999999999999999999999999999643 357899999999999999999999999998864

>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]

Probab=99.71  E-value=1.6e-17  Score=153.24  Aligned_cols=72  Identities=53%  Similarity=0.917  Sum_probs=64.8

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC--hHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccC
Q 019662            3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPND--KKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLK   75 (337)
Q Consensus         3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~--~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~   75 (337)
                      +|||+||||.++|+..||.+|||+||.+||||.-.+.  .+.|+++|-.|..|-|||+||++|+.||. |++.+.
T Consensus       394 RDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDn-GeDPLD  467 (504)
T KOG0624|consen  394 RDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDN-GEDPLD  467 (504)
T ss_pred             chHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccC-CCCCCC
Confidence            7999999999999999999999999999999986553  34689999999999999999999999997 565554

>PHA03102 Small T antigen; Reviewed

Probab=99.70  E-value=2.4e-17  Score=138.48  Aligned_cols=85  Identities=18%  Similarity=0.336  Sum_probs=71.7

Q ss_pred             CCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662            3 MDYYNILKVNKNA--TEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS   80 (337)
Q Consensus         3 ~~~y~iLgv~~~a--~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~   80 (337)
                      +.+|+||||+++|  |.++||+|||++|+++|||++++     .++|++|++||++|+|+.+|..||.+|.......   
T Consensus         5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~-----~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~~~~---   76 (153)
T PHA03102          5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD-----EEKMKELNTLYKKFRESVKSLRDLDGEEDSSSEE---   76 (153)
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch-----hHHHHHHHHHHHHHhhHHHhccccccCCcccccc---
Confidence            3579999999999  99999999999999999999864     4799999999999999999999999997643211   


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCC
Q 019662           81 SSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSS  114 (337)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~  114 (337)
                                .         ..+.++|..+||+.
T Consensus        77 ----------~---------~~~~~~f~~~fg~~   91 (153)
T PHA03102         77 ----------E---------DVPSGYVGATFGDR   91 (153)
T ss_pred             ----------c---------ccHHHHhhhhcCCc
Confidence                      0         13678888888754

>smart00271 DnaJ DnaJ molecular chaperone homology domain

Probab=99.68  E-value=9e-17  Score=114.69  Aligned_cols=59  Identities=66%  Similarity=1.120  Sum_probs=54.5

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChh
Q 019662            3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQ   61 (337)
Q Consensus         3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~   61 (337)
                      +|||++|||+++++.++||+||++|++++|||+++...+.+.+.|..|++||++|+||.
T Consensus         1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~   59 (60)
T smart00271        1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPE   59 (60)
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCC
Confidence            58999999999999999999999999999999998533578999999999999999985

>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.65  E-value=1.6e-16  Score=137.90  Aligned_cols=70  Identities=39%  Similarity=0.802  Sum_probs=65.3

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccc
Q 019662            3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEG   73 (337)
Q Consensus         3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~   73 (337)
                      .|+|+||||+++||.+|||+|||+|+++||||++|.. ++.++.|..|++||+.|+|+..|..|..||+..
T Consensus        99 fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~-~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PD  168 (230)
T KOG0721|consen   99 FDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPE-EGDEEFFEAIAKAYQALTDKKSRENWEKYGNPD  168 (230)
T ss_pred             CCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCc-chhHHHHHHHHHHHHHhcchhhHHHHHHhCCCC
Confidence            5999999999999999999999999999999999874 467889999999999999999999999999753

>cd06257 DnaJ DnaJ domain or J-domain

Probab=99.64  E-value=3.8e-16  Score=109.40  Aligned_cols=55  Identities=65%  Similarity=1.138  Sum_probs=51.7

Q ss_pred             CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCC
Q 019662            4 DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSD   59 (337)
Q Consensus         4 ~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d   59 (337)
                      |||++|||+++++.++|++|||+|+++||||+++.. +.+.+.|..|++||++|+|
T Consensus         1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~-~~~~~~~~~l~~Ay~~L~d   55 (55)
T cd06257           1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD   55 (55)
T ss_pred             ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHhcC
Confidence            799999999999999999999999999999999864 4689999999999999986

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.

>PRK01356 hscB co-chaperone HscB; Provisional

Probab=99.54  E-value=1e-14  Score=125.20  Aligned_cols=67  Identities=27%  Similarity=0.427  Sum_probs=58.7

Q ss_pred             CCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCh--HHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662            2 GMDYYNILKVNKN--ATEDDLKKSYRKLAMKWHPDKNPNDK--KEAEARFKQISEAYEVLSDPQKRAIYDQ   68 (337)
Q Consensus         2 ~~~~y~iLgv~~~--a~~~~Ik~ayr~la~~~hPd~~~~~~--~~~~~~f~~i~~Ay~~L~d~~~r~~yD~   68 (337)
                      +.|||++|||++.  ++..+|+++||+|+++||||++....  ..+.+.+..||+||++|+||.+|+.|+.
T Consensus         1 ~~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL   71 (166)
T PRK01356          1 MQNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYML   71 (166)
T ss_pred             CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            3799999999997  78999999999999999999986532  2345678999999999999999999985

>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.54  E-value=1.1e-14  Score=137.41  Aligned_cols=66  Identities=55%  Similarity=0.965  Sum_probs=64.0

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662            3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQ   68 (337)
Q Consensus         3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~   68 (337)
                      +|||.||||.++|+..|||+|||++|+.||||+|..++.+++.+|++|.+||.+|+||.+|..||.
T Consensus       373 kd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~ds  438 (486)
T KOG0550|consen  373 KDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDS  438 (486)
T ss_pred             hhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhccc
Confidence            699999999999999999999999999999999998878999999999999999999999999996

>PRK05014 hscB co-chaperone HscB; Provisional

Probab=99.53  E-value=1.4e-14  Score=124.97  Aligned_cols=66  Identities=32%  Similarity=0.508  Sum_probs=58.3

Q ss_pred             CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCh----HHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662            3 MDYYNILKVNKN--ATEDDLKKSYRKLAMKWHPDKNPNDK----KEAEARFKQISEAYEVLSDPQKRAIYDQ   68 (337)
Q Consensus         3 ~~~y~iLgv~~~--a~~~~Ik~ayr~la~~~hPd~~~~~~----~~~~~~f~~i~~Ay~~L~d~~~r~~yD~   68 (337)
                      +|||++|||++.  ++..+|+++||+|+++||||+.....    ..+.+.|..||+||++|+||.+|+.|+-
T Consensus         1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll   72 (171)
T PRK05014          1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLL   72 (171)
T ss_pred             CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHH
Confidence            489999999996  68899999999999999999975432    2367799999999999999999999984

>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.48  E-value=1.7e-14  Score=127.64  Aligned_cols=65  Identities=37%  Similarity=0.699  Sum_probs=61.0

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcc
Q 019662            3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQY   69 (337)
Q Consensus         3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~   69 (337)
                      .|.|+||||+++|+.+||.+|||+||++||||++++  +++.+.|..|..||++|.|.+.|+.||-+
T Consensus        33 enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~--~e~k~~F~~iAtayeilkd~e~rt~ydya   97 (329)
T KOG0722|consen   33 ENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRD--PESKKLFVKIATAYEILKDNETRTQYDYA   97 (329)
T ss_pred             hhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCC--chhhhhhhhhhcccccccchhhHHhHHHH
Confidence            589999999999999999999999999999999987  46779999999999999999999999953

>PRK03578 hscB co-chaperone HscB; Provisional

Probab=99.46  E-value=1.1e-13  Score=119.92  Aligned_cols=67  Identities=28%  Similarity=0.418  Sum_probs=58.1

Q ss_pred             CCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCh----HHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662            2 GMDYYNILKVNKN--ATEDDLKKSYRKLAMKWHPDKNPNDK----KEAEARFKQISEAYEVLSDPQKRAIYDQ   68 (337)
Q Consensus         2 ~~~~y~iLgv~~~--a~~~~Ik~ayr~la~~~hPd~~~~~~----~~~~~~f~~i~~Ay~~L~d~~~r~~yD~   68 (337)
                      .+|||++|||++.  ++..+|+++||+|+++||||+++...    ..+.+.+..||+||++|+||.+|+.|+.
T Consensus         5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll   77 (176)
T PRK03578          5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLL   77 (176)
T ss_pred             CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHH
Confidence            4799999999995  68999999999999999999986532    1245567999999999999999999995

>PRK00294 hscB co-chaperone HscB; Provisional

Probab=99.45  E-value=1.8e-13  Score=118.09  Aligned_cols=67  Identities=28%  Similarity=0.437  Sum_probs=59.5

Q ss_pred             CCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCh----HHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662            2 GMDYYNILKVNKN--ATEDDLKKSYRKLAMKWHPDKNPNDK----KEAEARFKQISEAYEVLSDPQKRAIYDQ   68 (337)
Q Consensus         2 ~~~~y~iLgv~~~--a~~~~Ik~ayr~la~~~hPd~~~~~~----~~~~~~f~~i~~Ay~~L~d~~~r~~yD~   68 (337)
                      ..|||++|||++.  .+..+|+++||+|+++||||++....    ..+.++|..||+||++|+||.+|+.|+-
T Consensus         3 ~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL   75 (173)
T PRK00294          3 TPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLL   75 (173)
T ss_pred             CCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence            4799999999997  67899999999999999999986532    2467789999999999999999999995

>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.35  E-value=7.3e-13  Score=126.39  Aligned_cols=65  Identities=45%  Similarity=0.646  Sum_probs=61.9

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQ   68 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~   68 (337)
                      ..|.|.+|||+.++|+++||+.||++|+-.|||||-.  +.|+|.|+.++.|||+|+|+.+|..||.
T Consensus       234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~--~~A~Eafk~Lq~Afevig~~~kR~eYd~  298 (490)
T KOG0720|consen  234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMI--PRAEEAFKKLQVAFEVIGDSVKRKEYDL  298 (490)
T ss_pred             CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCC--hhHHHHHHHHHHHHHHhcchhhhhHHHH
Confidence            3699999999999999999999999999999999985  5799999999999999999999999997

>PTZ00100 DnaJ chaperone protein; Provisional

Probab=99.35  E-value=9.6e-13  Score=105.10  Aligned_cols=51  Identities=22%  Similarity=0.462  Sum_probs=46.4

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcC
Q 019662            3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLS   58 (337)
Q Consensus         3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~   58 (337)
                      .++|++|||+++||.+||++|||+|++++|||++.+     .+.|++|++||++|.
T Consensus        65 ~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgGs-----~~~~~kIneAyevL~  115 (116)
T PTZ00100         65 SEAYKILNISPTASKERIREAHKQLMLRNHPDNGGS-----TYIASKVNEAKDLLL  115 (116)
T ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHHh
Confidence            479999999999999999999999999999998643     468899999999985

>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional

Probab=99.29  E-value=2.2e-12  Score=119.10  Aligned_cols=57  Identities=32%  Similarity=0.567  Sum_probs=50.8

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC------ChHHHHHHHHHHHHHHhhcCC
Q 019662            3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPN------DKKEAEARFKQISEAYEVLSD   59 (337)
Q Consensus         3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~------~~~~~~~~f~~i~~Ay~~L~d   59 (337)
                      .++|++|||+++||.+|||+|||+|+++||||++..      ..+.++++|++|++||++|+.
T Consensus       200 ~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~  262 (267)
T PRK09430        200 EDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK  262 (267)
T ss_pred             HhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999632      124688999999999999975

>PHA02624 large T antigen; Provisional

Probab=99.25  E-value=5e-12  Score=126.35  Aligned_cols=59  Identities=24%  Similarity=0.420  Sum_probs=55.3

Q ss_pred             CCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhh
Q 019662            3 MDYYNILKVNKNA--TEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIY   66 (337)
Q Consensus         3 ~~~y~iLgv~~~a--~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~y   66 (337)
                      +++|++|||+++|  +.++||+|||++|++||||++.+     .++|++|++||++|+|+.+|..|
T Consensus        11 ~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGd-----eekfk~Ln~AYevL~d~~k~~r~   71 (647)
T PHA02624         11 KELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGD-----EEKMKRLNSLYKKLQEGVKSARQ   71 (647)
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCc-----HHHHHHHHHHHHHHhcHHHhhhc
Confidence            4799999999999  99999999999999999999743     57999999999999999999998

>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=99.23  E-value=7.9e-12  Score=94.77  Aligned_cols=75  Identities=21%  Similarity=0.386  Sum_probs=59.6

Q ss_pred             CeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCC--CCccEEEEEEe
Q 019662          161 PVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQ--LPADLVFVIDE  238 (337)
Q Consensus       161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~--~~GDL~v~i~v  238 (337)
                      |++++++|+|.||+.|+++.+...      +|      +.++|.||+|+++|++++++|+|.+....  .+|||+|+++|
T Consensus         1 DL~~~~~I~l~~al~G~~i~i~~l------~g------~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V   68 (81)
T PF01556_consen    1 DLYCTIPISLKEALLGGTISIPTL------DG------KTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEV   68 (81)
T ss_dssp             EEEEEEEEEHHHHHH-EEEEEE-T------TS-------EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEE
T ss_pred             CeEEEEEeCHHHHhCCCEEEEECC------CC------CEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEE
Confidence            578999999999999999988776      67      58999999999999999999999975333  69999999999


Q ss_pred             eCCCccccC
Q 019662          239 KPHDVYKRD  247 (337)
Q Consensus       239 ~~~~~f~r~  247 (337)
                      .-+..++.+
T Consensus        69 ~~P~~ls~~   77 (81)
T PF01556_consen   69 EFPKKLSPE   77 (81)
T ss_dssp             E--SSTSHH
T ss_pred             ECCCCCCHH
Confidence            987776643

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....

>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

Probab=99.22  E-value=9.8e-12  Score=118.18  Aligned_cols=72  Identities=42%  Similarity=0.772  Sum_probs=65.8

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----ChHHHHHHHHHHHHHHhhcCChhhhhhhhccccccc
Q 019662            3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPN----DKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGL   74 (337)
Q Consensus         3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~----~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~   74 (337)
                      .|+|+||||+.+++..+||++||+|++|+|||+-+.    .+++-+++.++|++||+.|+|...|+.|-.||....
T Consensus        98 fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtPd~  173 (610)
T COG5407          98 FDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTPDS  173 (610)
T ss_pred             CChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCCC
Confidence            599999999999999999999999999999999764    356789999999999999999999999999997543

>PRK14282 chaperone protein DnaJ; Provisional

Probab=99.17  E-value=4.1e-11  Score=115.91  Aligned_cols=86  Identities=15%  Similarity=0.219  Sum_probs=77.0

Q ss_pred             CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEE
Q 019662          157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFV  235 (337)
Q Consensus       157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~  235 (337)
                      +++.|+++.++|||.||+.|+++.|.+.      +|      ++++|.||+|+++|++++|+|+|++.. +..+|||||+
T Consensus       273 r~G~DL~~~~~Isl~eAl~G~~~~i~~l------dG------~~i~v~Ip~g~~~g~~iri~GkG~p~~~~~~~GDL~V~  340 (369)
T PRK14282        273 RSGSDLIYDVTIDYLQAILGTTVEVPLP------EG------GTTMLKIPPGTQPETVFRLKGKGLPNMRYGRRGDLIVN  340 (369)
T ss_pred             EecCCEEEEEEeCHHHHhCCCEEEEeCC------CC------cEEEEEeCCCcCCCCEEEECCCCCCCCCCCCCCCEEEE
Confidence            6789999999999999999999988875      66      468999999999999999999999864 3468999999


Q ss_pred             EEeeCCCccccCCCceEEE
Q 019662          236 IDEKPHDVYKRDSNDLIVN  254 (337)
Q Consensus       236 i~v~~~~~f~r~g~dL~~~  254 (337)
                      |+|..|+.|++++.+|+.+
T Consensus       341 ~~v~~P~~l~~~~~~ll~~  359 (369)
T PRK14282        341 VHVEIPKRLSREERKLLKE  359 (369)
T ss_pred             EEEECCCCCCHHHHHHHHH
Confidence            9999999999999887654

>PRK01773 hscB co-chaperone HscB; Provisional

Probab=99.14  E-value=9.8e-11  Score=101.06  Aligned_cols=67  Identities=21%  Similarity=0.293  Sum_probs=58.5

Q ss_pred             CCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCC----hHHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662            2 GMDYYNILKVNKN--ATEDDLKKSYRKLAMKWHPDKNPND----KKEAEARFKQISEAYEVLSDPQKRAIYDQ   68 (337)
Q Consensus         2 ~~~~y~iLgv~~~--a~~~~Ik~ayr~la~~~hPd~~~~~----~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~   68 (337)
                      +.|||++|||++.  .+..+++++||+|.+++|||+....    +..+.+.-..||+||.+|+||.+|+.|=-
T Consensus         1 ~~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL   73 (173)
T PRK01773          1 MNNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAII   73 (173)
T ss_pred             CCChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHH
Confidence            4899999999996  8999999999999999999986443    23466778999999999999999999864

>PRK14294 chaperone protein DnaJ; Provisional

Probab=99.09  E-value=1.7e-10  Score=111.61  Aligned_cols=87  Identities=17%  Similarity=0.250  Sum_probs=76.7

Q ss_pred             CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEE
Q 019662          156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVF  234 (337)
Q Consensus       156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v  234 (337)
                      .|.+.||+++++|||.+|+.|+++.|...      +|       .++|.||+|+++|++|+|+|+|++.++ ..+|||||
T Consensus       260 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~~~v~ip~g~~~g~~iri~G~G~p~~~~~~~GDL~V  326 (366)
T PRK14294        260 ERDGNDVHCKVPISFVQAALGAQIEVPTL------EG-------ERELKIPKGTQPGDIFRFKGKGIPSLRGGGRGDQII  326 (366)
T ss_pred             eecCCCEEEEEEeCHHHHhCCCeEEEECC------CC-------cEEEEECCCcCCCCEEEECCCCCCCCCCCCCCCEEE
Confidence            46789999999999999999999988876      67       458999999999999999999998654 35899999


Q ss_pred             EEEeeCCCccccCCCceEEEE
Q 019662          235 VIDEKPHDVYKRDSNDLIVNH  255 (337)
Q Consensus       235 ~i~v~~~~~f~r~g~dL~~~~  255 (337)
                      +|+|..|+.|++++.+|+.++
T Consensus       327 ~~~v~~P~~l~~~q~~ll~~~  347 (366)
T PRK14294        327 EVEVKVPTRLTKKQEELLTEF  347 (366)
T ss_pred             EEEEECCCCCCHHHHHHHHHH
Confidence            999999999999888776553

>PRK14299 chaperone protein DnaJ; Provisional

Probab=99.09  E-value=1.3e-10  Score=108.92  Aligned_cols=86  Identities=10%  Similarity=0.079  Sum_probs=75.8

Q ss_pred             CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEE
Q 019662          156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFV  235 (337)
Q Consensus       156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~  235 (337)
                      .|++.||+++++|||.+|++|+++.|++.      +|       .++|.||+|+++|++++|+|+|.+..++.+|||+|+
T Consensus       197 ~R~G~DL~~~~~Isl~eAl~G~~~~v~tl------dG-------~~~v~ip~~~~~g~~~rl~g~G~p~~~~~~GDL~v~  263 (291)
T PRK14299        197 RLEGDDLYATVDVPAPIAVVGGKVRVMTL------DG-------PVEVTIPPRTQAGRKLRLKGKGWPRGPAGRGDQYAE  263 (291)
T ss_pred             EEECCEEEEEEecCHHHHhCCCEEEEECC------CC-------CEEEEeCCCcCCCCEEEECCCCCCCCCCCCCCEEEE
Confidence            46789999999999999999999988876      67       589999999999999999999998655568999999


Q ss_pred             EEeeCCCccccCCCceEEE
Q 019662          236 IDEKPHDVYKRDSNDLIVN  254 (337)
Q Consensus       236 i~v~~~~~f~r~g~dL~~~  254 (337)
                      ++|..|+.++.++.+++..
T Consensus       264 ~~V~~P~~l~~~~~~~l~~  282 (291)
T PRK14299        264 VRITIPTRPTPEEERLYKQ  282 (291)
T ss_pred             EEEECCCCCCHHHHHHHHH
Confidence            9999999998888766543

>PRK14285 chaperone protein DnaJ; Provisional

Probab=99.07  E-value=1.9e-10  Score=111.10  Aligned_cols=86  Identities=17%  Similarity=0.263  Sum_probs=76.2

Q ss_pred             CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCC-CCccEEEE
Q 019662          157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQ-LPADLVFV  235 (337)
Q Consensus       157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~-~~GDL~v~  235 (337)
                      +.+.||++.++|||.+|+.|+++.|++.      +|      ++++|.||+|+++|++++|+|+|++.++. .+|||||+
T Consensus       263 R~G~dL~~~~~Isl~eAl~G~~~~i~tl------dG------~~v~V~Ip~g~~~g~~irl~GkG~p~~~~~~~GDL~V~  330 (365)
T PRK14285        263 RNGKDLYATLPISFTQAALGKEIKIQTI------AS------KKIKIKIPKGTENDEQIIIKNEGMPILHTEKFGNLILI  330 (365)
T ss_pred             EeccceEEEEecCHHHHhCCCEEEEECC------CC------CEEEEEeCCCcCCCcEEEECCCCccCCCCCCCCCEEEE
Confidence            5688999999999999999999999886      66      47899999999999999999999987554 46999999


Q ss_pred             EEeeCCCccccCCCceEEE
Q 019662          236 IDEKPHDVYKRDSNDLIVN  254 (337)
Q Consensus       236 i~v~~~~~f~r~g~dL~~~  254 (337)
                      |+|..|+.|++++..|+.+
T Consensus       331 ~~v~~P~~l~~~q~~~l~~  349 (365)
T PRK14285        331 IKIKTPKNLNSNAIKLLEN  349 (365)
T ss_pred             EEEECCCCCCHHHHHHHHH
Confidence            9999999999888766544

>PRK14290 chaperone protein DnaJ; Provisional

Probab=99.07  E-value=2e-10  Score=110.94  Aligned_cols=86  Identities=14%  Similarity=0.170  Sum_probs=76.7

Q ss_pred             CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCC-CCccEEEE
Q 019662          157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQ-LPADLVFV  235 (337)
Q Consensus       157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~-~~GDL~v~  235 (337)
                      |.+.|+++.+.|||.+|+.|+.+.|.+.      +|       +++|.||+|+++|++|+|+|+|++.+++ .+|||||+
T Consensus       267 R~G~DL~~~~~Isl~eAl~G~~~~I~~~------~g-------~i~V~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~  333 (365)
T PRK14290        267 RINDDLYVDQKINFPQAALGGEIEIKLF------RE-------KYNLKIPEGTQPGEVLKIKGAGMPHLNGHGSGDLLVR  333 (365)
T ss_pred             EecCCEEEEEEeCHHHHhCCCEEEEEcC------Cc-------eEEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEE
Confidence            5688999999999999999999988865      44       6899999999999999999999987543 58999999


Q ss_pred             EEeeCCCccccCCCceEEEE
Q 019662          236 IDEKPHDVYKRDSNDLIVNH  255 (337)
Q Consensus       236 i~v~~~~~f~r~g~dL~~~~  255 (337)
                      |+|..|+.|++++.+|+.++
T Consensus       334 ~~V~~P~~l~~~~~~ll~~~  353 (365)
T PRK14290        334 INVEVPKRLTSKQKELIREF  353 (365)
T ss_pred             EEEECCCCCCHHHHHHHHHH
Confidence            99999999999998887664

>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB

Probab=99.06  E-value=3.5e-10  Score=96.38  Aligned_cols=55  Identities=29%  Similarity=0.460  Sum_probs=47.7

Q ss_pred             CCCHHHHHHHHHHHHHHhCCCCCCCC----hHHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662           14 NATEDDLKKSYRKLAMKWHPDKNPND----KKEAEARFKQISEAYEVLSDPQKRAIYDQ   68 (337)
Q Consensus        14 ~a~~~~Ik~ayr~la~~~hPd~~~~~----~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~   68 (337)
                      +.+..+|+++||+|+++||||+.+..    +..+.+.|..||+||++|+||.+|+.|+-
T Consensus         2 ~iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL   60 (157)
T TIGR00714         2 QLDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYML   60 (157)
T ss_pred             CCCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence            35789999999999999999985432    23477899999999999999999999996

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.

>PRK10767 chaperone protein DnaJ; Provisional

Probab=99.03  E-value=3.7e-10  Score=109.45  Aligned_cols=86  Identities=14%  Similarity=0.210  Sum_probs=76.3

Q ss_pred             CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEE
Q 019662          157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFV  235 (337)
Q Consensus       157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~  235 (337)
                      |.+.|++++++|||.+|+.|+++.|+..      +|       .++|.||+|+++|++++|+|+|++..+ ..+|||||+
T Consensus       259 R~G~DL~~~~~Isl~eAl~G~~~~i~~l------dG-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~  325 (371)
T PRK10767        259 RDGNDLYCEVPISFTTAALGGEIEVPTL------DG-------RVKLKIPEGTQTGKLFRLRGKGVKSVRSGARGDLYCQ  325 (371)
T ss_pred             EecCCEEEEEEeCHHHHhCCCeEEEecC------CC-------cEEEEeCCCCCCCCEEEECCCCcCCCCCCCCCCEEEE
Confidence            5688999999999999999999988776      66       589999999999999999999998643 467999999


Q ss_pred             EEeeCCCccccCCCceEEEE
Q 019662          236 IDEKPHDVYKRDSNDLIVNH  255 (337)
Q Consensus       236 i~v~~~~~f~r~g~dL~~~~  255 (337)
                      |+|..|+.|++++.+|+.++
T Consensus       326 ~~v~~P~~l~~~~~~ll~~l  345 (371)
T PRK10767        326 VVVETPVNLTKRQKELLEEF  345 (371)
T ss_pred             EEEECCCCCCHHHHHHHHHH
Confidence            99999999999998876654

>PRK14298 chaperone protein DnaJ; Provisional

Probab=99.03  E-value=3.4e-10  Score=109.71  Aligned_cols=86  Identities=16%  Similarity=0.251  Sum_probs=75.9

Q ss_pred             CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEE
Q 019662          157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFV  235 (337)
Q Consensus       157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~  235 (337)
                      |.+.||++.+.|||.||+.|+++.|++.      +|       .++|.||+|+++|++++|+|+|++..+ ..+|||||+
T Consensus       262 R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~i~v~ip~g~~~g~~lri~g~G~p~~~~~~~GDL~V~  328 (377)
T PRK14298        262 RVGDDIISEIPISFTQAALGADIMVPTL------YG-------KVKMNIPPGTQTHSVFRLKDKGMPRLHGHGKGDQLVK  328 (377)
T ss_pred             EEcCcEEEEEEeCHHHHhCCCeEEEecC------CC-------CEEEEeCCCcccCCEEEECCCCCCCCCCCCCCCEEEE
Confidence            5688999999999999999999988876      67       378999999999999999999998644 457999999


Q ss_pred             EEeeCCCccccCCCceEEEE
Q 019662          236 IDEKPHDVYKRDSNDLIVNH  255 (337)
Q Consensus       236 i~v~~~~~f~r~g~dL~~~~  255 (337)
                      |+|..|+.|++++.+|+.++
T Consensus       329 ~~V~~P~~ls~~~~~ll~~l  348 (377)
T PRK14298        329 VIVKTPTKLTQEQKELLREF  348 (377)
T ss_pred             EEEECCCCCCHHHHHHHHHH
Confidence            99999999999888776554

>PRK14284 chaperone protein DnaJ; Provisional

Probab=99.02  E-value=5e-10  Score=109.18  Aligned_cols=87  Identities=14%  Similarity=0.216  Sum_probs=75.0

Q ss_pred             CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCC-CeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEE
Q 019662          156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDAN-GRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLV  233 (337)
Q Consensus       156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~-G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~  233 (337)
                      .|++.||+++++|||++|+.|+++.|...      + |      ..++|+||+|+++|++++|+|+|++..+ ..+||||
T Consensus       274 ~R~G~DL~~~~~Isl~eAl~G~~~~v~tl------d~g------~~i~v~Ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~  341 (391)
T PRK14284        274 ERRGDDLILELPIGFVDAALGMKKEIPTL------LKE------GTCRLTIPEGIQSGTILKVRGQGFPNVHGKGRGDLL  341 (391)
T ss_pred             eeecCCEEEEEEecHHHHhCCCeEEEeec------CCC------cEEEEEECCccCCCeEEEECCCCCCCCCCCCCCcEE
Confidence            46789999999999999999999988865      3 2      3789999999999999999999998653 4689999


Q ss_pred             EEEEeeCCCccccCCCceEEE
Q 019662          234 FVIDEKPHDVYKRDSNDLIVN  254 (337)
Q Consensus       234 v~i~v~~~~~f~r~g~dL~~~  254 (337)
                      |+|+|..|+.++.++..|+.+
T Consensus       342 V~~~v~~P~~l~~~q~~ll~~  362 (391)
T PRK14284        342 VRISVETPQNLSEEQKELLRQ  362 (391)
T ss_pred             EEEEEECCCCCCHHHHHHHHH
Confidence            999999999888777666544

>PRK14279 chaperone protein DnaJ; Provisional

Probab=99.00  E-value=6.2e-10  Score=108.47  Aligned_cols=84  Identities=18%  Similarity=0.250  Sum_probs=72.6

Q ss_pred             CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEE
Q 019662          156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFV  235 (337)
Q Consensus       156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~  235 (337)
                      .|++.||++.++|||.+|+.|.++.|++.      +|       .++|+||+|+++|++|+|+|+|++..++.+|||||+
T Consensus       289 ~R~G~DL~~~~~Isl~eAl~G~~~~v~~l------dg-------~i~v~Ip~g~~~g~~iri~g~G~p~~~~~~GDL~I~  355 (392)
T PRK14279        289 GRDGDDLTVTVPVSFTELALGSTLSVPTL------DG-------PVGVKVPAGTADGRILRVRGRGVPKRSGGAGDLLVT  355 (392)
T ss_pred             eeecCcEEEEEEccHHHHcCCceEEEEcC------Cc-------eEEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEE
Confidence            36788999999999999999999888776      56       489999999999999999999999766678999999


Q ss_pred             EEeeCCCccccCCCceE
Q 019662          236 IDEKPHDVYKRDSNDLI  252 (337)
Q Consensus       236 i~v~~~~~f~r~g~dL~  252 (337)
                      |+|.-++.+..+...|+
T Consensus       356 ~~v~~P~~Ls~~q~~~l  372 (392)
T PRK14279        356 VKVAVPPNLDGAAAEAL  372 (392)
T ss_pred             EEEECCCCCCHHHHHHH
Confidence            99998887665554444

>PRK14287 chaperone protein DnaJ; Provisional

Probab=99.00  E-value=5.7e-10  Score=108.02  Aligned_cols=85  Identities=14%  Similarity=0.246  Sum_probs=74.3

Q ss_pred             CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEE
Q 019662          157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFV  235 (337)
Q Consensus       157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~  235 (337)
                      |.+.|+++.+.|||.+|+.|+++.|.+.      +|       .++|+||+|+++|++++|+|+|++..+ ..+|||||+
T Consensus       259 R~G~DL~~~~~Isl~eAl~G~~~~i~~l------dg-------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~V~  325 (371)
T PRK14287        259 RDGDDIYCEMPLTFPQVALGDEIEVPTL------NG-------KVKLKIPAGTQTGTSFRLRGKGVPNVHGRGQGDQHVQ  325 (371)
T ss_pred             EecCCeEEEEeccHHHHhCCCEEEEEcC------CC-------CEEEEECCCccCCcEEEEcCCCccCCCCCCCCCEEEE
Confidence            6789999999999999999999988876      66       479999999999999999999998643 457999999


Q ss_pred             EEeeCCCccccCCCceEEE
Q 019662          236 IDEKPHDVYKRDSNDLIVN  254 (337)
Q Consensus       236 i~v~~~~~f~r~g~dL~~~  254 (337)
                      |+|..|+.++++...|+.+
T Consensus       326 ~~v~~P~~l~~~q~~ll~~  344 (371)
T PRK14287        326 VRVVTPKNLTEKEKELMRE  344 (371)
T ss_pred             EEEEcCCCCCHHHHHHHHH
Confidence            9999999988877665544

>PRK14301 chaperone protein DnaJ; Provisional

Probab=98.99  E-value=7e-10  Score=107.45  Aligned_cols=86  Identities=14%  Similarity=0.180  Sum_probs=74.3

Q ss_pred             CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEE
Q 019662          156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVF  234 (337)
Q Consensus       156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v  234 (337)
                      .+.+.|++++++|||.+|+.|+++.|+..      +|       .++|.||+|+++|++++|+|+|++.++ ..+|||||
T Consensus       260 ~r~G~DL~~~~~Isl~eAl~G~~~~v~tl------dG-------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~I  326 (373)
T PRK14301        260 QRQGQDLVVTQEISFVQAALGDRIEVPTL------DD-------PVTLDIPKGTQSGEVFRLRGKGLPYLGSSQKGDLLV  326 (373)
T ss_pred             eeecCcEEEEEEecHHHHhCCCeEEEecC------Cc-------cEEEEECCCcCCCcEEEEcCCCCCCCCCCCCCCEEE
Confidence            46789999999999999999999988876      66       489999999999999999999999754 45899999


Q ss_pred             EEEeeCCCccccCCCceEEE
Q 019662          235 VIDEKPHDVYKRDSNDLIVN  254 (337)
Q Consensus       235 ~i~v~~~~~f~r~g~dL~~~  254 (337)
                      +|+|..|+.++.+..+++.+
T Consensus       327 ~~~V~~P~~l~~~q~~~l~~  346 (373)
T PRK14301        327 EVSVVTPTKLTKRQEELLRE  346 (373)
T ss_pred             EEEEECCCCCCHHHHHHHHH
Confidence            99999998887776655443

>PRK14288 chaperone protein DnaJ; Provisional

Probab=98.99  E-value=7.1e-10  Score=107.27  Aligned_cols=85  Identities=14%  Similarity=0.264  Sum_probs=74.1

Q ss_pred             CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCC-CCccEEE
Q 019662          156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQ-LPADLVF  234 (337)
Q Consensus       156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~-~~GDL~v  234 (337)
                      .|.+.||++.++|||.||++|+++.|+..      +|      +.++|.||+|+++|++++|+|+|++.++. .+|||||
T Consensus       254 ~R~G~DL~~~~~Isl~eAllG~~i~v~tL------dG------~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v  321 (369)
T PRK14288        254 KREGCDLFIEAPVFFTTIALGHTIKVPSL------KG------DELELKIPRNARDRQTFAFRNEGVKHPESSYRGSLIV  321 (369)
T ss_pred             EEeCCEEEEEEecCHHHHhcCCEEEeecC------CC------CEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCEEE
Confidence            36789999999999999999999999887      77      46899999999999999999999997554 4699999


Q ss_pred             EEEeeCCCccccCCCceE
Q 019662          235 VIDEKPHDVYKRDSNDLI  252 (337)
Q Consensus       235 ~i~v~~~~~f~r~g~dL~  252 (337)
                      +|+|..|+.|+.+...++
T Consensus       322 ~~~v~~P~~ls~~q~~~l  339 (369)
T PRK14288        322 ELQVIYPKSLNKEQQELL  339 (369)
T ss_pred             EEEEECCCCCCHHHHHHH
Confidence            999999988877665443

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=98.98  E-value=8e-10  Score=106.50  Aligned_cols=83  Identities=16%  Similarity=0.281  Sum_probs=72.9

Q ss_pred             CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCC-CCccEEEE
Q 019662          157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQ-LPADLVFV  235 (337)
Q Consensus       157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~-~~GDL~v~  235 (337)
                      +++.|+++.+.|||.||+.|+++.|...      +|       .++|.||+|+++|++++|+|+|++.+++ .+|||||+
T Consensus       264 r~g~DL~~~~~isl~eAl~G~~~~i~~l------dG-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~i~  330 (354)
T TIGR02349       264 RDGNDLYIEVPISFTQAILGGEIEVPTL------DG-------DVKLKIPAGTQSGTVFRLKGKGVPRLRGNGRGDLLVT  330 (354)
T ss_pred             EecCCEEEEEEeCHHHHhCCCeEEEecC------Cc-------eEEEEECCcccCCcEEEECCCCcCCCCCCCCCCEEEE
Confidence            5688999999999999999999888776      66       6899999999999999999999986543 68999999


Q ss_pred             EEeeCCCccccCCCceE
Q 019662          236 IDEKPHDVYKRDSNDLI  252 (337)
Q Consensus       236 i~v~~~~~f~r~g~dL~  252 (337)
                      |+|..|+.+++++.+++
T Consensus       331 ~~v~~P~~l~~~~~~~l  347 (354)
T TIGR02349       331 VKVETPKNLSKEQKELL  347 (354)
T ss_pred             EEEECCCCCCHHHHHHH
Confidence            99999998887776543

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK14300 chaperone protein DnaJ; Provisional

Probab=98.98  E-value=8.4e-10  Score=106.91  Aligned_cols=84  Identities=15%  Similarity=0.297  Sum_probs=73.0

Q ss_pred             CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEE
Q 019662          157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFV  235 (337)
Q Consensus       157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~  235 (337)
                      |++.|+++.+.|+|.+|+.|+++.|.+.      +|      +.++|.||+|+++|++|+|+|+|++.++ ..+|||||+
T Consensus       262 R~G~Dl~~~~~Isl~~Al~G~~~~i~~l------dg------~~i~v~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~  329 (372)
T PRK14300        262 VDGANLHCKLPISFVNAALGGEIEVPVI------EG------GKVNLTIPAGTQNGDQLRLRSKGMSKMRSTIRGDMLTH  329 (372)
T ss_pred             EecCCEEEEEecCHHHHhCCCEEEEecC------CC------CEEEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEE
Confidence            6788999999999999999999998876      55      4799999999999999999999998654 468999999


Q ss_pred             EEeeCCCccccCCCceE
Q 019662          236 IDEKPHDVYKRDSNDLI  252 (337)
Q Consensus       236 i~v~~~~~f~r~g~dL~  252 (337)
                      |+|..|..|+-+...++
T Consensus       330 ~~v~~P~~ls~~qk~~l  346 (372)
T PRK14300        330 IHVEVPKNLSKRQRELL  346 (372)
T ss_pred             EEEECCCCCCHHHHHHH
Confidence            99999988776665444

>PRK14295 chaperone protein DnaJ; Provisional

Probab=98.98  E-value=8.5e-10  Score=107.40  Aligned_cols=85  Identities=15%  Similarity=0.277  Sum_probs=73.2

Q ss_pred             CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEEE
Q 019662          157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVI  236 (337)
Q Consensus       157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i  236 (337)
                      |.+.||+++++|||.+|+.|+++.|+..      +|      +.++|+||+|+++|++|+|+|+|++..++.+|||||+|
T Consensus       283 R~G~DL~~~~~Isl~eAl~G~~~~I~tl------dG------~~~~v~ip~g~~~g~~iri~G~G~p~~~~~~GDL~i~~  350 (389)
T PRK14295        283 RSGDNLTVTVPVTFPEAALGAEVRVPTL------GG------PPVTVKLPPGTPNGRVLRVRGKGAVRKDGTRGDLLVTV  350 (389)
T ss_pred             EecCCEEEEEeecHHHHhCCCeEEEECC------CC------CEEEEEECCccCCCcEEEECCCCcCCCCCCCCCEEEEE
Confidence            6788999999999999999999888765      66      47899999999999999999999987666789999999


Q ss_pred             EeeCCCccccCCCceEE
Q 019662          237 DEKPHDVYKRDSNDLIV  253 (337)
Q Consensus       237 ~v~~~~~f~r~g~dL~~  253 (337)
                      +|.-+..++.+...|+.
T Consensus       351 ~v~~P~~Ls~~qk~~l~  367 (389)
T PRK14295        351 EVAVPKDLSGKAREALE  367 (389)
T ss_pred             EEECCCCCCHHHHHHHH
Confidence            99988776655554443

>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.95  E-value=1.1e-09  Score=94.19  Aligned_cols=64  Identities=34%  Similarity=0.714  Sum_probs=59.3

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhh
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAI   65 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~   65 (337)
                      +-|+|+||.|.+..+.++||+.||+|++-.|||+||++.+.|...|.-|.+||..|-|+.-|..
T Consensus        52 nLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr  115 (250)
T KOG1150|consen   52 NLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKR  115 (250)
T ss_pred             ccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence            4589999999999999999999999999999999999988899999999999999999885543

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=98.94  E-value=1.2e-09  Score=103.78  Aligned_cols=85  Identities=15%  Similarity=0.252  Sum_probs=74.7

Q ss_pred             CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCC-CCCCCccEEEE
Q 019662          157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQ-PNQLPADLVFV  235 (337)
Q Consensus       157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~-~~~~~GDL~v~  235 (337)
                      |.+.||+++++|++.+|.+|.++.+++.      +|       .++|+||||++.|++++|+|+|++. .+...|||||+
T Consensus       261 R~g~dL~~~~~Is~~~AalG~~i~vptl------~g-------~~~l~ip~Gtq~G~~~rl~gkG~p~~~~~~~GDl~v~  327 (371)
T COG0484         261 RDGDDLYCEVPISFTEAALGGEIEVPTL------DG-------RVKLKIPAGTQTGEVFRLRGKGMPKLRSGGRGDLYVR  327 (371)
T ss_pred             ECCCceEeccccCHHHHhcCCEEEEEec------CC-------CEEEecCCCCccCcEEEEcCCCccccCCCCcCCEEEE
Confidence            5678999999999999999999999987      77       4899999999999999999999996 45557999999


Q ss_pred             EEeeCCCccccCCCceEEE
Q 019662          236 IDEKPHDVYKRDSNDLIVN  254 (337)
Q Consensus       236 i~v~~~~~f~r~g~dL~~~  254 (337)
                      |+|..+..+......|+.+
T Consensus       328 v~v~~P~~ls~~q~~lL~~  346 (371)
T COG0484         328 VKVETPKNLSDEQKELLEE  346 (371)
T ss_pred             EEEEcCCCCCHHHHHHHHH
Confidence            9999999887776665543

>PRK14286 chaperone protein DnaJ; Provisional

Probab=98.93  E-value=1.6e-09  Score=104.95  Aligned_cols=85  Identities=14%  Similarity=0.143  Sum_probs=73.3

Q ss_pred             CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEE
Q 019662          157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFV  235 (337)
Q Consensus       157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~  235 (337)
                      |.+.||++.+.|+|.+|++|+++.|...      +|      +.++|+||+|+++|++++|+|+|++..+ ..+|||||+
T Consensus       267 R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG------~~i~v~ip~g~~~g~~~ri~G~G~P~~~~~~~GDL~V~  334 (372)
T PRK14286        267 RQGNDLILVRKISLAQAILGAEIEVPTI------DG------KKAKMKIPEGTESGQVFRLKGHGMPYLGAYGKGDQHVI  334 (372)
T ss_pred             EecCCEEEEEEECHHHHhCCCEEEEeCC------CC------CEEEEEeCCccCCCcEEEECCCCCCCCCCCCCCcEEEE
Confidence            6788999999999999999999888876      67      4689999999999999999999998643 457999999


Q ss_pred             EEeeCCCccccCCCceEE
Q 019662          236 IDEKPHDVYKRDSNDLIV  253 (337)
Q Consensus       236 i~v~~~~~f~r~g~dL~~  253 (337)
                      |+|.-|+.++.+..+|+.
T Consensus       335 ~~V~~P~~Ls~~qk~~l~  352 (372)
T PRK14286        335 VKIEIPKKITRRQRELIE  352 (372)
T ss_pred             EEEECCCCCCHHHHHHHH
Confidence            999998877766655543

>PRK14293 chaperone protein DnaJ; Provisional

Probab=98.92  E-value=1.4e-09  Score=105.57  Aligned_cols=87  Identities=16%  Similarity=0.221  Sum_probs=76.1

Q ss_pred             CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCC--CCccEE
Q 019662          156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQ--LPADLV  233 (337)
Q Consensus       156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~--~~GDL~  233 (337)
                      .+++.|+++.++|||.+|+.|+++.|.+.      +|       .++|.||+|+++|++++|+|+|.+.++.  ..||||
T Consensus       263 ~r~g~DL~~~~~Isl~eAl~G~~~~i~~l------dG-------~~~i~ip~~~~~g~~~ri~g~G~p~~~~~~~~GDL~  329 (374)
T PRK14293        263 RRDGINILSEIKISYLQAILGDTLEVDTV------DG-------PVELTIPAGTQPNTVLTLENKGVPRLGNPVARGDHL  329 (374)
T ss_pred             ChhhhceEEEeccCHHHHhCCCEEEecCC------CC-------CEEEEeCCCCCCCCEEEECCCCCCCCCCCCCcCCEE
Confidence            35678999999999999999999999887      67       3689999999999999999999986543  479999


Q ss_pred             EEEEeeCCCccccCCCceEEEE
Q 019662          234 FVIDEKPHDVYKRDSNDLIVNH  255 (337)
Q Consensus       234 v~i~v~~~~~f~r~g~dL~~~~  255 (337)
                      |+|+|..|+.+++++.+|+.++
T Consensus       330 v~~~v~~P~~l~~~~~~l~~~l  351 (374)
T PRK14293        330 ITVKVKIPTRISDEERELLEKL  351 (374)
T ss_pred             EEEEEECCCCCCHHHHHHHHHH
Confidence            9999999999999888776543

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=98.92  E-value=1.8e-09  Score=102.06  Aligned_cols=82  Identities=16%  Similarity=0.152  Sum_probs=70.9

Q ss_pred             CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEE
Q 019662          156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFV  235 (337)
Q Consensus       156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~  235 (337)
                      .+.+.|++++++|||.+|++|+++.|...      +|       .++|+||+|+++|++++|+|+|++.++ .+|||||+
T Consensus       205 ~r~g~DL~~~~~Isl~~al~G~~~~i~~~------~g-------~v~v~ip~g~~~g~~~ri~g~G~p~~~-~~GdL~v~  270 (306)
T PRK10266        205 DIVGQDLEIVVPLAPWEAALGAKVTVPTL------KE-------SILLTIPPGSQAGQRLRVKGKGLVSKK-QTGDLYAV  270 (306)
T ss_pred             EEeCCceEEEEecCHHHHhCCCEEEeeCC------Cc-------cEEEEeCCCcCCCCEEEECCCCCCCCC-CCCCEEEE
Confidence            35688999999999999999999988775      55       479999999999999999999998654 57999999


Q ss_pred             EEeeCCCccccCCCce
Q 019662          236 IDEKPHDVYKRDSNDL  251 (337)
Q Consensus       236 i~v~~~~~f~r~g~dL  251 (337)
                      ++|..|+.+.-+...|
T Consensus       271 ~~v~~P~~l~~~q~~l  286 (306)
T PRK10266        271 LKIVMPPKPDEKTAAL  286 (306)
T ss_pred             EEEECCCCCCHHHHHH
Confidence            9999998876555443

>PRK14276 chaperone protein DnaJ; Provisional

Probab=98.91  E-value=2e-09  Score=104.59  Aligned_cols=84  Identities=15%  Similarity=0.222  Sum_probs=71.9

Q ss_pred             CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEE
Q 019662          156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVF  234 (337)
Q Consensus       156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v  234 (337)
                      .|.+.||++.++|||.||+.|+++.|.+.      +|       .++|.||+|+++|++++|+|+|++..+ ..+|||||
T Consensus       266 ~R~G~DL~~~~~Isl~eAl~G~~~~v~tl------dg-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V  332 (380)
T PRK14276        266 ERDGSTIYYTLPISFVQAALGDTVEVPTV------HG-------DVELKIPAGTQTGKKFRLRGKGAPKLRGGGNGDQHV  332 (380)
T ss_pred             eeecceEEEEEecCHHHHhCCCeEEEEcC------CC-------cEEEEECCCCCCCCEEEECCCCcCCCCCCCCCCEEE
Confidence            36788999999999999999999988876      66       479999999999999999999999754 45799999


Q ss_pred             EEEeeCCCccccCCCceE
Q 019662          235 VIDEKPHDVYKRDSNDLI  252 (337)
Q Consensus       235 ~i~v~~~~~f~r~g~dL~  252 (337)
                      +|+|.-+..++.+...++
T Consensus       333 ~~~v~~P~~l~~~q~~~l  350 (380)
T PRK14276        333 TVNIVTPTKLNDAQKEAL  350 (380)
T ss_pred             EEEEECCCCCCHHHHHHH
Confidence            999998887765554443

>PRK14280 chaperone protein DnaJ; Provisional

Probab=98.90  E-value=2.5e-09  Score=103.72  Aligned_cols=83  Identities=14%  Similarity=0.244  Sum_probs=71.2

Q ss_pred             CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEE
Q 019662          157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFV  235 (337)
Q Consensus       157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~  235 (337)
                      |.+.||++.+.|||.||+.|+++.|...      +|       .++|.||+|+++|++++|+|+|++..+ ..+|||||+
T Consensus       264 R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dg-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~  330 (376)
T PRK14280        264 RDGDDIYCEMPLTFAQAALGDEIEVPTL------HG-------KVKLKIPAGTQTGTQFRLKGKGVPNVRGYGQGDQYVV  330 (376)
T ss_pred             EecCCEEEEEecCHHHHhCCCEEEEecC------Cc-------eEEEEECCCCCCCcEEEEcCCCCCCCCCCCCCCEEEE
Confidence            6789999999999999999999988876      66       479999999999999999999998643 458999999


Q ss_pred             EEeeCCCccccCCCceE
Q 019662          236 IDEKPHDVYKRDSNDLI  252 (337)
Q Consensus       236 i~v~~~~~f~r~g~dL~  252 (337)
                      |+|..++.++.+...++
T Consensus       331 ~~v~~P~~Ls~~q~~~l  347 (376)
T PRK14280        331 VRVVTPTKLTDRQKELL  347 (376)
T ss_pred             EEEECCCCCCHHHHHHH
Confidence            99998877665554443

>PRK14281 chaperone protein DnaJ; Provisional

Probab=98.89  E-value=2.6e-09  Score=104.36  Aligned_cols=83  Identities=17%  Similarity=0.228  Sum_probs=71.3

Q ss_pred             CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEE
Q 019662          157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFV  235 (337)
Q Consensus       157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~  235 (337)
                      |++.||+++++|||.+|+.|+++.|.+.      +|       .++|+||+|+++|++++|+|+|++..+ ..+|||||+
T Consensus       283 R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dg-------~i~v~ip~g~~~G~~~ri~g~G~P~~~~~~~GDL~V~  349 (397)
T PRK14281        283 RNGDDVIYNLAVSYPDLVLGTKVEVPTL------DG-------AVKLTIPAGTQPETMLRIPGKGIGHLRGSGRGDQYVR  349 (397)
T ss_pred             EecCCEEEEEEecHHHHhcCCeEEeecC------Cc-------cEEEEeCCccCCCcEEEEcCCCCCCCCCCCCCCEEEE
Confidence            6788999999999999999999988876      66       478999999999999999999998643 457999999


Q ss_pred             EEeeCCCccccCCCceE
Q 019662          236 IDEKPHDVYKRDSNDLI  252 (337)
Q Consensus       236 i~v~~~~~f~r~g~dL~  252 (337)
                      |+|.-+..++.+...|+
T Consensus       350 ~~V~~P~~Ls~~qk~~l  366 (397)
T PRK14281        350 VNVFVPKEVSHQDKELL  366 (397)
T ss_pred             EEEEcCCCCCHHHHHHH
Confidence            99998877665554443

>PRK14291 chaperone protein DnaJ; Provisional

Probab=98.88  E-value=6.8e-09  Score=100.96  Aligned_cols=75  Identities=21%  Similarity=0.310  Sum_probs=66.8

Q ss_pred             CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEE
Q 019662          156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVF  234 (337)
Q Consensus       156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v  234 (337)
                      .+.+.||++.+.|||+||+.|+++.|++.      +|      +.++|.||+|+++|++|+|+|+|++.++ ..+|||||
T Consensus       271 ~r~G~DL~~~~~Isl~eAl~G~~~~i~~l------dG------~~l~V~Ip~g~~~G~~i~i~G~G~p~~~~~~~GDL~V  338 (382)
T PRK14291        271 ERRGDNLYLDVNITVAEAVLGTELEVPLL------DG------KKEKVKIPPGTKEGDKIRVPGKGMPRLKGSGYGDLVV  338 (382)
T ss_pred             eeecCCeEEEEEeeHHHHhCCCEEEEecC------CC------CEEEEEECCccCCCCEEEECCCCCCCCCCCCCCCEEE
Confidence            36789999999999999999999999886      67      4689999999999999999999998654 45899999


Q ss_pred             EEEeeCCC
Q 019662          235 VIDEKPHD  242 (337)
Q Consensus       235 ~i~v~~~~  242 (337)
                      +|+|.-+.
T Consensus       339 ~~~V~~P~  346 (382)
T PRK14291        339 RVHIDVPK  346 (382)
T ss_pred             EEEEEeCC
Confidence            99999775

>PRK14297 chaperone protein DnaJ; Provisional

Probab=98.86  E-value=3.5e-09  Score=102.95  Aligned_cols=83  Identities=16%  Similarity=0.148  Sum_probs=70.9

Q ss_pred             CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEE
Q 019662          157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFV  235 (337)
Q Consensus       157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~  235 (337)
                      |.+.|+++.++|||.+|+.|+++.|.+.      +|       .++|.||+|+++|++++|+|+|.+..+ ..+|||||+
T Consensus       269 R~G~DL~~~~~Isl~eAl~G~~~~i~~l------dg-------~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~  335 (380)
T PRK14297        269 RKGFDIYIDKHISFAKAALGTEIKVPTV------DG-------EVKYEVPAGTQPGTVFRLKGKGVPRVNSTGRGNQYVT  335 (380)
T ss_pred             EeCCCEEEEEEeCHHHHhCCCcEEEEcC------CC-------cEEEEECCCcCCCCEEEEcCCCcCCCCCCCCCcEEEE
Confidence            5788999999999999999999988876      66       479999999999999999999998643 457999999


Q ss_pred             EEeeCCCccccCCCceE
Q 019662          236 IDEKPHDVYKRDSNDLI  252 (337)
Q Consensus       236 i~v~~~~~f~r~g~dL~  252 (337)
                      |+|.-+..++.+...++
T Consensus       336 ~~v~~P~~ls~~q~~~l  352 (380)
T PRK14297        336 VIVDIPKKLNSKQKEAL  352 (380)
T ss_pred             EEEEcCCCCCHHHHHHH
Confidence            99998877665554443

>PRK14278 chaperone protein DnaJ; Provisional

Probab=98.85  E-value=4.9e-09  Score=101.79  Aligned_cols=85  Identities=15%  Similarity=0.188  Sum_probs=71.4

Q ss_pred             CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEE
Q 019662          156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVF  234 (337)
Q Consensus       156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v  234 (337)
                      .|++.||++.++|+|.+|+.|+.+.|...      ++      ..++|.||+|+++|++++|+|+|++.. +..+|||||
T Consensus       259 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------d~------~~i~v~ip~g~~~g~~lrl~g~G~p~~~~~~~GDL~V  326 (378)
T PRK14278        259 VRDGDDLHCTVSVPMVDAALGTTVTVEAI------LD------GPSEITIPPGTQPGSVITLRGRGMPHLRSGGRGDLHA  326 (378)
T ss_pred             EEcCCCEEEEEecCHHHHhcCCeEEEecC------CC------CeEEEEeCCCcCCCcEEEECCCCCCCCCCCCCCCEEE
Confidence            36789999999999999999999888865      33      378999999999999999999999864 345899999


Q ss_pred             EEEeeCCCccccCCCceE
Q 019662          235 VIDEKPHDVYKRDSNDLI  252 (337)
Q Consensus       235 ~i~v~~~~~f~r~g~dL~  252 (337)
                      +|+|.-+..++.+...++
T Consensus       327 ~~~V~~P~~Ls~~qk~~l  344 (378)
T PRK14278        327 HVEVVVPTRLDHEDIELL  344 (378)
T ss_pred             EEEEEcCCCCCHHHHHHH
Confidence            999998876665554444

>PRK14296 chaperone protein DnaJ; Provisional

Probab=98.84  E-value=4.8e-09  Score=101.61  Aligned_cols=83  Identities=13%  Similarity=0.136  Sum_probs=70.6

Q ss_pred             CC-CCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCC--CCCCccEE
Q 019662          157 RK-PPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQP--NQLPADLV  233 (337)
Q Consensus       157 ~~-~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~--~~~~GDL~  233 (337)
                      |+ +.||+++++|||.||++|+++.|+..      +|       .++|.||+|+++|++++|+|+|++..  .+..||||
T Consensus       270 R~~G~DL~~~~~Isl~eAllG~~~~i~tl------dG-------~~~v~ip~~t~~g~~~ri~GkGmP~~~~~~~~GDL~  336 (372)
T PRK14296        270 IINNNDILMTYNISYLDAILGNEIIIKTL------DG-------DIKYKLPKSINSNELIIINNKGLYKSINKDKRGDLI  336 (372)
T ss_pred             EeCCCcEEEEEecCHHHHhCCCEEEeeCC------CC-------CEEEEECCccCCCcEEEEcCCCCCcCCCCCCcCCEE
Confidence            43 78999999999999999999999887      77       37899999999999999999999842  34579999


Q ss_pred             EEEEeeCCCccccCCCceE
Q 019662          234 FVIDEKPHDVYKRDSNDLI  252 (337)
Q Consensus       234 v~i~v~~~~~f~r~g~dL~  252 (337)
                      |+|+|.-++.++.+...|+
T Consensus       337 V~~~V~~P~~Ls~~q~~~l  355 (372)
T PRK14296        337 IKVNIVVPKNLSKKEKELI  355 (372)
T ss_pred             EEEEEECCCCCCHHHHHHH
Confidence            9999998877766555443

>PRK14292 chaperone protein DnaJ; Provisional

Probab=98.83  E-value=4.3e-09  Score=102.06  Aligned_cols=85  Identities=14%  Similarity=0.179  Sum_probs=73.1

Q ss_pred             CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEE
Q 019662          156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVF  234 (337)
Q Consensus       156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v  234 (337)
                      .+.+.|++..+.|+|.||+.|+.+.|...      +|       ..+|.||+|+++|++++|+|+|++.. +..+|||||
T Consensus       258 ~r~g~dL~~~~~isl~eAl~G~~~~i~tl------dG-------~~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V  324 (371)
T PRK14292        258 RREQEHLIYEARIGFAKAALGGQITVPTL------DG-------PQVIEVKPGTQHGDLHRLRGQGMPRLQGAGTGDLIV  324 (371)
T ss_pred             ccchhceeEEeccCHHHHhCCCeEEEECC------CC-------CEEEecCCCcCCCcEEEECCCCCCCCCCCCCCCEEE
Confidence            46788999999999999999999998876      67       23699999999999999999999864 445899999


Q ss_pred             EEEeeCCCccccCCCceEE
Q 019662          235 VIDEKPHDVYKRDSNDLIV  253 (337)
Q Consensus       235 ~i~v~~~~~f~r~g~dL~~  253 (337)
                      +|+|..|+.++.+...|+.
T Consensus       325 ~~~v~~P~~l~~~q~~ll~  343 (371)
T PRK14292        325 EYEIAVPKQLSPEAREALE  343 (371)
T ss_pred             EEEEECCCCCCHHHHHHHH
Confidence            9999999988877665554

>PRK14277 chaperone protein DnaJ; Provisional

Probab=98.83  E-value=6e-09  Score=101.49  Aligned_cols=83  Identities=16%  Similarity=0.238  Sum_probs=70.8

Q ss_pred             CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEE
Q 019662          157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFV  235 (337)
Q Consensus       157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~  235 (337)
                      |.+.||+++++|||.||++|+++.|+..      +|       .++|.||+|+++|++++|+|+|++..+ ..+|||||+
T Consensus       276 R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~  342 (386)
T PRK14277        276 REGYNVYLEMPITFTDAALGGEIEIPTL------DG-------KVKFTIPEGTQTGTKFRLRGKGIPHLRGRGRGDQIVK  342 (386)
T ss_pred             EecCCEEEEEEcCHHHHhCCCEEEEEcC------CC-------CEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEE
Confidence            5688999999999999999999988876      77       379999999999999999999998643 357999999


Q ss_pred             EEeeCCCccccCCCceE
Q 019662          236 IDEKPHDVYKRDSNDLI  252 (337)
Q Consensus       236 i~v~~~~~f~r~g~dL~  252 (337)
                      |+|.-+..++.+..+++
T Consensus       343 ~~V~~P~~Ls~~qk~~l  359 (386)
T PRK14277        343 VYIEVPKKLTEKQKELL  359 (386)
T ss_pred             EEEEeCCCCCHHHHHHH
Confidence            99998876665554444

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=98.80  E-value=6.6e-09  Score=101.88  Aligned_cols=85  Identities=15%  Similarity=0.178  Sum_probs=71.8

Q ss_pred             CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCC--CcCCCEEEECCCCCCCCC--CCCcc
Q 019662          156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPG--WKKGTKITFPDKGNEQPN--QLPAD  231 (337)
Q Consensus       156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G--~~~G~~i~l~g~G~~~~~--~~~GD  231 (337)
                      .|.+.||+++++|||.+|++|+++.|+..      +|      +.++|+||||  +++|++++|+|+|++..+  ..+||
T Consensus       270 ~R~G~DL~~~~~Isl~eAllG~~i~I~tL------dG------~~l~I~ip~g~vt~pg~~~~I~geGmP~~~~~~~rGD  337 (421)
T PTZ00037        270 KREGGDLFITKKISLYEALTGFVFYITHL------DG------RKLLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGN  337 (421)
T ss_pred             EEeCCeEEEEEeCCHHHHhcCCEEEeeCC------CC------CeEEEEeCCCcccCCCcEEEeCCCCcccCCCCCCCCC
Confidence            36789999999999999999999988877      77      4689999999  999999999999998643  35799


Q ss_pred             EEEEEEeeCC--CccccCCCceE
Q 019662          232 LVFVIDEKPH--DVYKRDSNDLI  252 (337)
Q Consensus       232 L~v~i~v~~~--~~f~r~g~dL~  252 (337)
                      |||+|+|.-+  ..++.+...|+
T Consensus       338 L~V~~~V~~P~~~~Ls~~qk~ll  360 (421)
T PTZ00037        338 LYVTFEVIFPVDRKFTNEEKEIL  360 (421)
T ss_pred             EEEEEEEEcCCCCCCCHHHHHHH
Confidence            9999999988  66665554433

>PRK14283 chaperone protein DnaJ; Provisional

Probab=98.80  E-value=9e-09  Score=100.00  Aligned_cols=84  Identities=14%  Similarity=0.192  Sum_probs=70.7

Q ss_pred             CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEE
Q 019662          157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFV  235 (337)
Q Consensus       157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~  235 (337)
                      +.+.|+++++.|||.+|+.|+.+.|.+.      +|       .++|.||+|+++|++++|+|+|.+..+ ..+|||||+
T Consensus       267 r~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GdL~v~  333 (378)
T PRK14283        267 REGANLYYEKPISFVQAALGDTVDVPTI------DG-------PVELKIPAGTQSGTTFRLKGHGMPSLRWSGKGNLYVK  333 (378)
T ss_pred             EecCCEEEEEecCHHHHhcCCeEEEEcC------Cc-------eEEEEeCCCCCCCCEEEECCCCCCCCCCCCCCCEEEE
Confidence            5688999999999999999999888865      66       589999999999999999999998643 468999999


Q ss_pred             EEeeCCCccccCCCceEE
Q 019662          236 IDEKPHDVYKRDSNDLIV  253 (337)
Q Consensus       236 i~v~~~~~f~r~g~dL~~  253 (337)
                      |+|.-++.++.+...|+.
T Consensus       334 ~~v~~P~~l~~~q~~ll~  351 (378)
T PRK14283        334 VKVVVPKKLSPKQKELLR  351 (378)
T ss_pred             EEEEeCCCCCHHHHHHHH
Confidence            999987766655544443

>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

Probab=98.76  E-value=1.5e-08  Score=91.05  Aligned_cols=68  Identities=35%  Similarity=0.526  Sum_probs=58.1

Q ss_pred             CCcccccCCCC---CCCHHHHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHHHHHHhhcCChhhhhhhhccc
Q 019662            3 MDYYNILKVNK---NATEDDLKKSYRKLAMKWHPDKNPNDK-KEAEARFKQISEAYEVLSDPQKRAIYDQYG   70 (337)
Q Consensus         3 ~~~y~iLgv~~---~a~~~~Ik~ayr~la~~~hPd~~~~~~-~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G   70 (337)
                      .|+|.+|||+.   .|++.+|.+|.++.+.+||||+..... ....+-|+.|+.||+||+|+.+|..||..-
T Consensus        43 ~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~d  114 (379)
T COG5269          43 VDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSND  114 (379)
T ss_pred             hhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhccccc
Confidence            58999999986   789999999999999999999862110 235689999999999999999999999743

>PRK14289 chaperone protein DnaJ; Provisional

Probab=98.74  E-value=1.6e-08  Score=98.63  Aligned_cols=82  Identities=15%  Similarity=0.197  Sum_probs=69.8

Q ss_pred             CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEE
Q 019662          156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVF  234 (337)
Q Consensus       156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v  234 (337)
                      .+.+.|+++.+.|+|.+|+.|+.+.|.+.      +|       .++|.||+|+++|++++|+|+|.+.++ ..+|||||
T Consensus       274 ~r~g~DL~~~~~Isl~eAl~G~~~~i~~l------dg-------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v  340 (386)
T PRK14289        274 IRDENDLIYNLLLSVPTAALGGAVEVPTI------DG-------KAKVKIEAGTQPGKVLRLRNKGLPSVNGYGTGDLLV  340 (386)
T ss_pred             cccccceeEEeccCHHHHhCCCeEEeecC------Cc-------eEEEEECCccCCCcEEEECCCCcCCCCCCCCCcEEE
Confidence            35678999999999999999999998886      56       579999999999999999999998643 46899999


Q ss_pred             EEEeeCCCccccCCCc
Q 019662          235 VIDEKPHDVYKRDSND  250 (337)
Q Consensus       235 ~i~v~~~~~f~r~g~d  250 (337)
                      +|+|.-+..++.+...
T Consensus       341 ~~~v~~P~~l~~~q~~  356 (386)
T PRK14289        341 NVSVYIPETLSKEEKQ  356 (386)
T ss_pred             EEEEEeCCCCCHHHHH
Confidence            9999987666554443

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=98.64  E-value=5.4e-08  Score=99.09  Aligned_cols=69  Identities=49%  Similarity=0.941  Sum_probs=64.8

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccc
Q 019662            3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEG   73 (337)
Q Consensus         3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~   73 (337)
                      +|||+||||+++|+.++||+|||+||++||||+++.  +.+.++|++|++||++|+|+.+|+.||+||..+
T Consensus         2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~--~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG   70 (871)
T TIGR03835         2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA--PDAASIFAEINEANDVLSNPKKRANYDKYGHDG   70 (871)
T ss_pred             CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHHHHHHHhCCHHHHHHHhhhcccc
Confidence            699999999999999999999999999999999986  467889999999999999999999999988654

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]

Probab=98.46  E-value=1.8e-07  Score=97.12  Aligned_cols=51  Identities=39%  Similarity=0.685  Sum_probs=44.6

Q ss_pred             CcccccCCCCCC----CHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcC
Q 019662            4 DYYNILKVNKNA----TEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLS   58 (337)
Q Consensus         4 ~~y~iLgv~~~a----~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~   58 (337)
                      +-|+||.|+-+-    ..+.||++|++||++|||||||+    ..++|..+|+|||.|+
T Consensus      1282 ~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPE----GRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1282 LAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPE----GREMFERVNKAYELLS 1336 (2235)
T ss_pred             HHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCch----HHHHHHHHHHHHHHHH
Confidence            469999998543    45889999999999999999985    4689999999999998

>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.43  E-value=1.5e-07  Score=82.88  Aligned_cols=54  Identities=35%  Similarity=0.674  Sum_probs=49.1

Q ss_pred             CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHh-hcCC
Q 019662            4 DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYE-VLSD   59 (337)
Q Consensus         4 ~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~-~L~d   59 (337)
                      .||++|||..+|+.++++.||..||+++|||...+  +...+.|.+|.+||. ||+.
T Consensus        48 e~fril~v~e~~~adevr~af~~lakq~hpdsgs~--~adaa~f~qideafrkvlq~  102 (342)
T KOG0568|consen   48 ECFRILGVEEGADADEVREAFHDLAKQVHPDSGSE--EADAARFIQIDEAFRKVLQE  102 (342)
T ss_pred             HHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCc--cccHHHHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999876  356789999999998 7764

>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.00  E-value=9e-06  Score=63.25  Aligned_cols=49  Identities=27%  Similarity=0.411  Sum_probs=42.7

Q ss_pred             cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCh
Q 019662            7 NILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP   60 (337)
Q Consensus         7 ~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~   60 (337)
                      .||||+++++.+.||+|+|++....|||+..++     -.=.+||||+++|...
T Consensus        60 lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSP-----YlAsKINEAKdlLe~~  108 (112)
T KOG0723|consen   60 LILGVTPSLDKDKIKEAHRRIMLANHPDRGGSP-----YLASKINEAKDLLEGT  108 (112)
T ss_pred             HHhCCCccccHHHHHHHHHHHHHcCCCcCCCCH-----HHHHHHHHHHHHHhcc
Confidence            489999999999999999999999999999764     2335799999999753

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.69  E-value=0.0001  Score=69.55  Aligned_cols=74  Identities=24%  Similarity=0.293  Sum_probs=66.0

Q ss_pred             CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCC--CcCCCEEEECCCCCCCCCCCCccEEE
Q 019662          157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPG--WKKGTKITFPDKGNEQPNQLPADLVF  234 (337)
Q Consensus       157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G--~~~G~~i~l~g~G~~~~~~~~GDL~v  234 (337)
                      |++.++.+.+.++|.|+..|..+.+...      +|      +.+++.++||  +.+|++++++|+|++......|||||
T Consensus       249 Rrg~dL~~~~~i~l~eal~G~~~~~~~l------dG------r~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~~g~lyi  316 (337)
T KOG0712|consen  249 RRGSDLYRKLTISLVEALCGFQRVWETL------DG------RLLKLSSKPGEVISPGDTKRVEGEGMPIFRNPKGDLYI  316 (337)
T ss_pred             ecccccceeeecchhhccccceEEEEcc------CC------ceEEEecCCCceeChhHEEeecCCCcccccCCCCcEEE
Confidence            5688999999999999999988888755      77      5899999999  99999999999999975555999999


Q ss_pred             EEEeeCCC
Q 019662          235 VIDEKPHD  242 (337)
Q Consensus       235 ~i~v~~~~  242 (337)
                      .++|+-++
T Consensus       317 ~~~v~fp~  324 (337)
T KOG0712|consen  317 KFEVKFPK  324 (337)
T ss_pred             EEEEEcCC
Confidence            99999776

>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=97.04  E-value=0.00072  Score=56.43  Aligned_cols=66  Identities=29%  Similarity=0.556  Sum_probs=52.7

Q ss_pred             CCcccccCCCC--CCCHHHHHHHHHHHHHHhCCCCCC----CChHHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662            3 MDYYNILKVNK--NATEDDLKKSYRKLAMKWHPDKNP----NDKKEAEARFKQISEAYEVLSDPQKRAIYDQ   68 (337)
Q Consensus         3 ~~~y~iLgv~~--~a~~~~Ik~ayr~la~~~hPd~~~----~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~   68 (337)
                      ++||.++|...  ...+..+..-|.-..+++|||+..    .+...|.+...++|+||.+|.||-+|+.|=.
T Consensus         8 ~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yil   79 (168)
T KOG3192|consen    8 SRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLL   79 (168)
T ss_pred             HHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence            57999986654  456777777899999999999832    1223578889999999999999999999864

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=96.36  E-value=0.002  Score=55.83  Aligned_cols=55  Identities=36%  Similarity=0.583  Sum_probs=46.4

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---C---hHHHHHHHHHHHHHHhhc
Q 019662            3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPN---D---KKEAEARFKQISEAYEVL   57 (337)
Q Consensus         3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~---~---~~~~~~~f~~i~~Ay~~L   57 (337)
                      .+.|.+|++...++..+|+++|+++...+|||+-..   .   -+.+.+++++|++||+.+
T Consensus       113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~  173 (174)
T COG1076         113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI  173 (174)
T ss_pred             hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence            478999999999999999999999999999997321   1   146788999999999853

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=96.13  E-value=0.0043  Score=53.84  Aligned_cols=65  Identities=29%  Similarity=0.460  Sum_probs=51.0

Q ss_pred             CcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCh----HHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662            4 DYYNILKVNKNA--TEDDLKKSYRKLAMKWHPDKNPNDK----KEAEARFKQISEAYEVLSDPQKRAIYDQ   68 (337)
Q Consensus         4 ~~y~iLgv~~~a--~~~~Ik~ayr~la~~~hPd~~~~~~----~~~~~~f~~i~~Ay~~L~d~~~r~~yD~   68 (337)
                      ||....+..+.+  ..+.++..|+.+++++|||+.....    ..+.+.+..++.||.+|.||-+|+.|=.
T Consensus         2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~l   72 (174)
T COG1076           2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLL   72 (174)
T ss_pred             CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence            455566666654  4566889999999999999975432    2355789999999999999999998864

>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]

Probab=94.51  E-value=0.051  Score=54.12  Aligned_cols=47  Identities=34%  Similarity=0.446  Sum_probs=33.8

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh------HHHHHHHHHHHHHHhh
Q 019662           10 KVNKNATEDDLKKSYRKLAMKWHPDKNPNDK------KEAEARFKQISEAYEV   56 (337)
Q Consensus        10 gv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~------~~~~~~f~~i~~Ay~~   56 (337)
                      .+..=.+.++||+||||..+..||||-+...      -.|++.|..+.+|+..
T Consensus       395 sltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~  447 (453)
T KOG0431|consen  395 SLTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNK  447 (453)
T ss_pred             chhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHh
Confidence            4445569999999999999999999976531      1345556666666543

>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []

Probab=91.91  E-value=0.32  Score=39.83  Aligned_cols=52  Identities=23%  Similarity=0.295  Sum_probs=37.5

Q ss_pred             ccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhh
Q 019662            6 YNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQK   62 (337)
Q Consensus         6 y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~   62 (337)
                      ..||+|++..+.++|.+.|.+|-...+|++...     .-.=.+|..|.|.|..+.+
T Consensus        61 ~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGS-----fYLQSKV~rAKErl~~El~  112 (127)
T PF03656_consen   61 RQILNVKEELSREEIQKRYKHLFKANDPSKGGS-----FYLQSKVFRAKERLEQELK  112 (127)
T ss_dssp             HHHHT--G--SHHHHHHHHHHHHHHT-CCCTS------HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHcCCCCccCHHHHHHHHHHHHhccCCCcCCC-----HHHHHHHHHHHHHHHHHHH
Confidence            469999999999999999999999999998764     3344578889988875543

In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.

>PF13446 RPT: A repeated domain in UCH-protein

Probab=88.63  E-value=1.1  Score=31.74  Aligned_cols=26  Identities=15%  Similarity=0.420  Sum_probs=23.6

Q ss_pred             CcccccCCCCCCCHHHHHHHHHHHHH
Q 019662            4 DYYNILKVNKNATEDDLKKSYRKLAM   29 (337)
Q Consensus         4 ~~y~iLgv~~~a~~~~Ik~ayr~la~   29 (337)
                      +-|+.|||+++++.+.|-.+|+....
T Consensus         6 ~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~   31 (62)
T PF13446_consen    6 EAYEILGIDEDTDDDFIISAFQSKVN   31 (62)
T ss_pred             HHHHHhCcCCCCCHHHHHHHHHHHHH
Confidence            35899999999999999999999777

>TIGR02642 phage_xxxx uncharacterized phage protein

Probab=86.21  E-value=0.5  Score=41.31  Aligned_cols=46  Identities=11%  Similarity=0.044  Sum_probs=38.0

Q ss_pred             hhheeCceEEEE--EEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEEC
Q 019662          171 EELYSGSTRKMK--ISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFP  218 (337)
Q Consensus       171 ~e~~~G~~~~i~--~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~  218 (337)
                      +..|.|..+.+.  -.|..|+|+| .+..++...+.+ .|+.+|++|++.
T Consensus       102 C~~C~G~G~~i~~~~~C~~C~G~G-~v~~~~~~~~k~-~g~~~g~~it~~  149 (186)
T TIGR02642       102 CPRCRGTGLIQRRQRECDTCAGTG-RFRPTVEDLLKS-FGVDSGAAIVLK  149 (186)
T ss_pred             CCCCCCeeEEecCCCCCCCCCCcc-EEeeeEEEEEEe-eeccCCceeeHH
Confidence            456888888886  4688889999 677778888999 999999999875

This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.

>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]

Probab=83.67  E-value=1  Score=43.06  Aligned_cols=55  Identities=36%  Similarity=0.538  Sum_probs=43.2

Q ss_pred             CCCHHHHHHHHHHHHHHhCCCCCCC---ChHHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662           14 NATEDDLKKSYRKLAMKWHPDKNPN---DKKEAEARFKQISEAYEVLSDPQKRAIYDQ   68 (337)
Q Consensus        14 ~a~~~~Ik~ayr~la~~~hPd~~~~---~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~   68 (337)
                      -++..+|+.+|+..++.+||++-..   .....++.|++|.+||++|.+..+|..+|.
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~   60 (335)
T KOG0724|consen    3 LASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDS   60 (335)
T ss_pred             cccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhh
Confidence            3678899999999999999998741   112567889999999999998666555554

>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised

Probab=80.17  E-value=3.5  Score=36.37  Aligned_cols=39  Identities=21%  Similarity=0.422  Sum_probs=30.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhh-cCC
Q 019662           12 NKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEV-LSD   59 (337)
Q Consensus        12 ~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~-L~d   59 (337)
                      +++||.+||.+|+.++..+|--|         ++.-.+|..||+. |++
T Consensus         1 S~~ASfeEIq~Arn~ll~~y~gd---------~~~~~~IEaAYD~ILM~   40 (194)
T PF11833_consen    1 SEDASFEEIQAARNRLLAQYAGD---------EKSREAIEAAYDAILME   40 (194)
T ss_pred             CCCCCHHHHHHHHHHHHHHhcCC---------HHHHHHHHHHHHHHHHH
Confidence            57999999999999999998322         2445578899985 444

This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.

>PF14687 DUF4460: Domain of unknown function (DUF4460)

Probab=80.02  E-value=3  Score=33.38  Aligned_cols=47  Identities=26%  Similarity=0.480  Sum_probs=35.4

Q ss_pred             CCCCHHHHHHHHHHHHHHhCCCC---CCCChHHHHHHHHHHHHHHhhcCC
Q 019662           13 KNATEDDLKKSYRKLAMKWHPDK---NPNDKKEAEARFKQISEAYEVLSD   59 (337)
Q Consensus        13 ~~a~~~~Ik~ayr~la~~~hPd~---~~~~~~~~~~~f~~i~~Ay~~L~d   59 (337)
                      +..+..+++.|.|.+-++.|||.   +|..++..++-++.++.-.+.|..
T Consensus         4 r~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~   53 (112)
T PF14687_consen    4 RNLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKK   53 (112)
T ss_pred             hhhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhc
Confidence            45677899999999999999995   454444456667777777777764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	337
3agz_A	190	Crystal Structure Of Human Hsp40 Hdj1 Peptide-Bindi		1e-44
2qld_A	183	Human Hsp40 Hdj1 Length = 183		2e-44
3agx_A	181	Crystal Structure Of Human Hsp40 Hdj1 Peptide-Bindi		2e-44
2q2g_A	180	Crystal Structure Of Dimerization Domain Of Hsp40 F		8e-31
2b26_A	173	The Crystal Structure Of The Protein Complex Of Yea		5e-25
1c3g_A	170	S. Cerevisiae Heat Shock Protein 40 Sis1 Length = 1		6e-25
2ej7_A	82	Solution Structure Of The Dnaj Domain Of The Human		1e-21
2lgw_A	99	Solution Structure Of The J Domain Of Hsj1a Length		4e-21
1xbl_A	107	Nmr Structure Of The J-Domain (Residues 2-76) In Th		4e-20
1bqz_A	77	J-Domain (Residues 1-77) Of The Escherichia Coli N-		4e-20
1bq0_A	103	J-Domain (Residues 1-77) Of The Escherichia Coli N-		4e-20
2dmx_A	92	Solution Structure Of The J Domain Of Dnaj Homolog		1e-19
1nlt_A	248	The Crystal Structure Of Hsp40 Ydj1 Length = 248		2e-19
2ctw_A	109	Solution Structure Of J-Domain From Mouse Dnaj Subf		4e-18
2lo1_A	71	Nmr Structure Of The Protein Bc008182, A Dnaj-Like		1e-17
1hdj_A	77	Human Hsp40 (Hdj-1), Nmr Length = 77		2e-17
2och_A	73	J-domain Of Dnj-12 From Caenorhabditis Elegans Leng		2e-16
2o37_A	92	J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From S		8e-15
2ctp_A	78	Solution Structure Of J-Domain From Human Dnaj Subf		1e-14
2cug_A	88	Solution Structure Of The J Domain Of The Pseudo Dn		5e-14
2dn9_A	79	Solution Structure Of J-Domain From The Dnaj Homolo		8e-14
2ctr_A	88	Solution Structure Of J-Domain From Human Dnaj Subf		9e-14
3apo_A	780	Crystal Structure Of Full-Length Erdj5 Length = 780		3e-13
3apq_A	210	Crystal Structure Of J-Trx1 Fragment Of Erdj5 Lengt		5e-13
2kqx_A	73	Nmr Structure Of The J-Domain (Residues 2-72) In Th		9e-11
3lz8_A	329	Structure Of A Putative Chaperone Dnaj From Klebsie		3e-10
2y4u_A	450	Crystal Structure Of Human P58(Ipk) In Space Group		2e-09
2y4t_A	450	Crystal Structure Of The Human Co-Chaperone P58(Ipk		2e-09
1xao_A	121	Hsp40-Ydj1 Dimerization Domain Length = 121		2e-07
2qsa_A	109	Crystal Structure Of J-Domain Of Dnaj Homolog Dnj-2		3e-07
2l6l_A	155	Solution Structure Of Human J-Protein Co-Chaperone,		3e-06
1wjz_A	94	Soluiotn Structure Of J-Domain Of Mouse Dnaj Like P		1e-05
2yua_A	99	Solution Structure Of The Dnaj Domain From Human Wi		3e-05
2ctq_A	112	Solution Structure Of J-Domain From Human Dnaj Subf		4e-05

>pdb|3AGZ|A Chain A, Crystal Structure Of Human Hsp40 Hdj1 Peptide-Binding Domain Complexed With A C-Terminal Peptide Of Hsp70 Length = 190

Iteration: 1
 Score =  176 bits (447), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 86/177 (48%), Positives = 124/177 (70%), Gaps = 1/177 (0%)
Query: 160 PPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTP-ESEILTIDVKPGWKKGTKITFP 218
           PPV   L  SLEE+YSG T+KMKIS   ++ +G+    E +ILTI+VK GWK+GTKITFP
Sbjct: 12  PPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFP 71
Query: 219 DKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDL 278
            +G++  N +PAD+VFV+ +KPH+++KRD +D+I   ++SL EAL G +V++ TLDGR +
Sbjct: 72  KEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTI 131
Query: 279 NIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL 335
            +   D+I PG    +PGEG+P+ + P  RGDL I+FEV FP ++    R  L++ L
Sbjct: 132 PVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL 188

>pdb|2QLD|A Chain A, Human Hsp40 Hdj1 Length = 183

Iteration: 1
 Score =  176 bits (446), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 86/177 (48%), Positives = 124/177 (70%), Gaps = 1/177 (0%)
Query: 160 PPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTP-ESEILTIDVKPGWKKGTKITFP 218
           PPV   L  SLEE+YSG T+KMKIS   ++ +G+    E +ILTI+VK GWK+GTKITFP
Sbjct: 5   PPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFP 64
Query: 219 DKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDL 278
            +G++  N +PAD+VFV+ +KPH+++KRD +D+I   ++SL EAL G +V++ TLDGR +
Sbjct: 65  KEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTI 124
Query: 279 NIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL 335
            +   D+I PG    +PGEG+P+ + P  RGDL I+FEV FP ++    R  L++ L
Sbjct: 125 PVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL 181

>pdb|3AGX|A Chain A, Crystal Structure Of Human Hsp40 Hdj1 Peptide-Binding Domain Length = 181

Iteration: 1
 Score =  176 bits (445), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 86/177 (48%), Positives = 124/177 (70%), Gaps = 1/177 (0%)
Query: 160 PPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTP-ESEILTIDVKPGWKKGTKITFP 218
           PPV   L  SLEE+YSG T+KMKIS   ++ +G+    E +ILTI+VK GWK+GTKITFP
Sbjct: 3   PPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFP 62
Query: 219 DKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDL 278
            +G++  N +PAD+VFV+ +KPH+++KRD +D+I   ++SL EAL G +V++ TLDGR +
Sbjct: 63  KEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTI 122
Query: 279 NIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL 335
            +   D+I PG    +PGEG+P+ + P  RGDL I+FEV FP ++    R  L++ L
Sbjct: 123 PVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL 179

>pdb|2Q2G|A Chain A, Crystal Structure Of Dimerization Domain Of Hsp40 From Cryptosporidium Parvum, Cgd2_1800 Length = 180

Iteration: 1
 Score =  130 bits (328), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 70/175 (40%), Positives = 104/175 (59%), Gaps = 4/175 (2%)
Query: 163 ESKLPCSLEELYSGSTRKMKISRT-VVDANGRQTPESEILTIDVKPGWKKGTKITFPDKG 221
           E  L  +LEELY G  +K+K++R   ++   R   E  I+ +++KPGWK GTK+T+  +G
Sbjct: 7   EVPLLVTLEELYLGKRKKIKVTRKRFIEHKVRN--EENIVEVEIKPGWKDGTKLTYSGEG 64
Query: 222 N-EQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNI 280
           + E P   P DLV +I  K H  + RD   LI    + L  AL G +  + TLD R+L I
Sbjct: 65  DQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIXKVTIPLVRALTGFTCPVTTLDNRNLQI 124
Query: 281 AVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL 335
            + +I++P     +P EG PI  +PG +GDL ++F++ FP  LTPEQ+  +K AL
Sbjct: 125 PIKEIVNPKTRKIVPNEGXPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIKEAL 179

>pdb|2B26|A Chain A, The Crystal Structure Of The Protein Complex Of Yeast Hsp40 Sis1 And Hsp70 Ssa1 Length = 173

Iteration: 1
 Score =  111 bits (278), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
Query: 162 VESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKG 221
           V+  LP SLE+L+ G  +  KI R        +T     + I +KPGWK GTKIT+ ++G
Sbjct: 3   VQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQ----IDIQLKPGWKAGTKITYKNQG 58
Query: 222 NEQPNQ-LPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNI 280
           +  P       L FVI EK H  +KRD +DLI    +S  E+L G S ++ T+DGR L +
Sbjct: 59  DYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPL 118
Query: 281 AVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGL 331
           +    + P      PG+GMP  + P  RG+L +K++V +P  L   Q+  +
Sbjct: 119 SRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAI 169

>pdb|1C3G|A Chain A, S. Cerevisiae Heat Shock Protein 40 Sis1 Length = 170

Iteration: 1
 Score =  111 bits (277), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 93/171 (54%), Gaps = 5/171 (2%)
Query: 162 VESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKG 221
           V+  LP SLE+L+ G  +  KI R        +T     + I +KPGWK GTKIT+ ++G
Sbjct: 3   VQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQ----IDIQLKPGWKAGTKITYKNQG 58
Query: 222 NEQPNQ-LPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNI 280
           +  P       L FVI EK H  +KRD +DLI    +S  E+L G S ++ T+DGR L +
Sbjct: 59  DYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPL 118
Query: 281 AVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGL 331
           +    + P      PG+GMP  + P  RG+L +K++V +P  L   Q+  +
Sbjct: 119 SRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAI 169

>pdb|2EJ7|A Chain A, Solution Structure Of The Dnaj Domain Of The Human Protein Hcg3, A Hypothetical Protein Tmp_locus_21 Length = 82

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 44/68 (64%), Positives = 58/68 (85%)
Query: 3  MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQK 62
          +DYY +L V + A+ + +KK+YRKLA+KWHPDKNP +K+EAE RFKQ++EAYEVLSD +K
Sbjct: 9  VDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKK 68
Query: 63 RAIYDQYG 70
          R IYD+YG
Sbjct: 69 RDIYDRYG 76

>pdb|2LGW|A Chain A, Solution Structure Of The J Domain Of Hsj1a Length = 99

Iteration: 1
 Score = 98.6 bits (244), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 43/70 (61%), Positives = 59/70 (84%)
Query: 5  YYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRA 64
          YY IL V ++A+ DD+KK+YR+ A++WHPDKNP++K+ AE +FK+++EAYEVLSD  KR 
Sbjct: 4  YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKRE 63
Query: 65 IYDQYGEEGL 74
          IYD+YG EGL
Sbjct: 64 IYDRYGREGL 73

>pdb|1XBL|A Chain A, Nmr Structure Of The J-Domain (Residues 2-76) In The Escherichia Coli N-Terminal Fragment (Residues 2-108) Of The Molecular Chaperone Dnaj, 20 Structures Length = 107

Iteration: 1
 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 44/73 (60%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 3  MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQK 62
           DYY IL V+K A E +++K+Y++LAMK+HPD+N  DK EAEA+FK+I EAYEVL+D QK
Sbjct: 3  QDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDK-EAEAKFKEIKEAYEVLTDSQK 61
Query: 63 RAIYDQYGEEGLK 75
          RA YDQYG    +
Sbjct: 62 RAAYDQYGHAAFE 74

>pdb|1BQZ|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-78) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 77

Iteration: 1
 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 44/68 (64%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
Query: 3  MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQK 62
           DYY IL V+K A E +++K+Y++LAMK+HPD+N  DK EAEA+FK+I EAYEVL+D QK
Sbjct: 3  QDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDK-EAEAKFKEIKEAYEVLTDSQK 61
Query: 63 RAIYDQYG 70
          RA YDQYG
Sbjct: 62 RAAYDQYG 69

>pdb|1BQ0|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-104) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 103

Iteration: 1
 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 44/72 (61%), Positives = 57/72 (79%), Gaps = 1/72 (1%)
Query: 4  DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
          DYY IL V+K A E +++K+Y++LAMK+HPD+N  DK EAEA+FK+I EAYEVL+D QKR
Sbjct: 4  DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDK-EAEAKFKEIKEAYEVLTDSQKR 62
Query: 64 AIYDQYGEEGLK 75
          A YDQYG    +
Sbjct: 63 AAYDQYGHAAFE 74

>pdb|2DMX|A Chain A, Solution Structure Of The J Domain Of Dnaj Homolog Subfamily B Member 8 Length = 92

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 42/70 (60%), Positives = 60/70 (85%), Gaps = 1/70 (1%)
Query: 2  GM-DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
          GM +YY +L V  +A+ +D+KK+YRKLA++WHPDKNP++K+EAE +FK +SEAYEVLSD 
Sbjct: 7  GMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDS 66
Query: 61 QKRAIYDQYG 70
          +KR++YD+ G
Sbjct: 67 KKRSLYDRAG 76

>pdb|1NLT|A Chain A, The Crystal Structure Of Hsp40 Ydj1 Length = 248

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 80/134 (59%), Gaps = 4/134 (2%)
Query: 190 ANGRQTP-ESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDS 248
            NG++   E +IL + V+PG K G +I F  + ++ P+ +P D+VF++ E+PH  +KRD 
Sbjct: 102 CNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDG 161
Query: 249 NDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVT--DIISPGFELGIPGEGMPIAREPG 306
           +DL+   ++ L  A+ G   +L  + G  L + +   ++I+PG    I G+GMPI +  G
Sbjct: 162 DDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKY-G 220
Query: 307 NRGDLRIKFEVKFP 320
             G+L IKF +K P
Sbjct: 221 GYGNLIIKFTIKDP 234

>pdb|2CTW|A Chain A, Solution Structure Of J-Domain From Mouse Dnaj Subfamily C Menber 5 Length = 109

Iteration: 1
 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 42/73 (57%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
Query: 2  GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQ 61
          G   Y++L ++KNAT DD+KKSYRKLA+K+HPDKNP D  EA  +FK+I+ A+ +L+D  
Sbjct: 16 GESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNP-DNPEAADKFKEINNAHAILTDAT 74
Query: 62 KRAIYDQYGEEGL 74
          KR IYD+YG  GL
Sbjct: 75 KRNIYDKYGSLGL 87

>pdb|2LO1|A Chain A, Nmr Structure Of The Protein Bc008182, A Dnaj-Like Domain From Homo Sapiens Length = 71

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/68 (60%), Positives = 57/68 (83%), Gaps = 4/68 (5%)
Query: 5  YYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRA 64
          YY++L V  NAT+++LKK+YRKLA+K+HPDKNPN+ +    +FKQIS+AYEVLSD +KR 
Sbjct: 8  YYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGE----KFKQISQAYEVLSDAKKRE 63
Query: 65 IYDQYGEE 72
          +YD+ GE+
Sbjct: 64 LYDKGGEQ 71

>pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr Length = 77

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 39/74 (52%), Positives = 59/74 (79%), Gaps = 2/74 (2%)
Query: 2  GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQ 61
          G DYY  L + + A+++++K++YR+ A+++HPDKN      AE +FK+I+EAY+VLSDP+
Sbjct: 2  GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPG--AEEKFKEIAEAYDVLSDPR 59
Query: 62 KRAIYDQYGEEGLK 75
          KR I+D+YGEEGLK
Sbjct: 60 KREIFDRYGEEGLK 73

>pdb|2OCH|A Chain A, J-domain Of Dnj-12 From Caenorhabditis Elegans Length = 73

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/68 (58%), Positives = 55/68 (80%), Gaps = 4/68 (5%)
Query: 5  YYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRA 64
          YY++L V  +A++++LKK+YRK+A+K+HPDKNP+       +FKQIS+AYEVLSD +KR 
Sbjct: 10 YYDVLGVKPDASDNELKKAYRKMALKFHPDKNPD----GAEQFKQISQAYEVLSDEKKRQ 65
Query: 65 IYDQYGEE 72
          IYDQ GEE
Sbjct: 66 IYDQGGEE 73

>pdb|2O37|A Chain A, J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From Saccharomyces Cerevisiae Length = 92

Iteration: 1
 Score = 77.8 bits (190), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 52/70 (74%), Gaps = 4/70 (5%)
Query: 6  YNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAI 65
          Y++L V+ +A E +LKK YRK A+K+HPDK   D +    +FK+ISEA+E+L+DPQKR I
Sbjct: 11 YDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTE----KFKEISEAFEILNDPQKREI 66
Query: 66 YDQYGEEGLK 75
          YDQYG E  +
Sbjct: 67 YDQYGLEAAR 76

>pdb|2CTP|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 12 Length = 78

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Query: 4  DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
          DYY IL V++ A+++DLKK+YR+LA+K+HPDK  N    A   FK I  AY VLS+P+KR
Sbjct: 8  DYYEILGVSRGASDEDLKKAYRRLALKFHPDK--NHAPGATEAFKAIGTAYAVLSNPEKR 65
Query: 64 AIYDQYG 70
            YDQ+G
Sbjct: 66 KQYDQFG 72

>pdb|2CUG|A Chain A, Solution Structure Of The J Domain Of The Pseudo Dnaj Protein, Mouse Hypothetical Mkiaa0962 Length = 88

Iteration: 1
 Score = 75.1 bits (183), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
Query: 1  MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
          +  D Y +L V++ A++ D+KK+Y+KLA +WHPDKN +    AE RF QIS+AYE+LS+ 
Sbjct: 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD--PGAEDRFIQISKAYEILSNE 72
Query: 61 QKRAIYDQYG 70
          +KR  YD YG
Sbjct: 73 EKRTNYDHYG 82

>pdb|2DN9|A Chain A, Solution Structure Of J-Domain From The Dnaj Homolog, Human Tid1 Protein Length = 79

Iteration: 1
 Score = 74.3 bits (181), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 37/67 (55%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 4  DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
          DYY IL V +NA++ ++KK+Y +LA K+HPD N +D K A+ +F Q++EAYEVLSD  KR
Sbjct: 8  DYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPK-AKEKFSQLAEAYEVLSDEVKR 66
Query: 64 AIYDQYG 70
            YD YG
Sbjct: 67 KQYDAYG 73

>pdb|2CTR|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 9 Length = 88

Iteration: 1
 Score = 74.3 bits (181), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 50/70 (71%), Gaps = 2/70 (2%)
Query: 5  YYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRA 64
          YY+IL V K+A+E  +KK++ KLAMK+HPDKN +   +AEA+F++I+EAYE LSD  +R 
Sbjct: 9  YYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS--PDAEAKFREIAEAYETLSDANRRK 66
Query: 65 IYDQYGEEGL 74
           YD  G    
Sbjct: 67 EYDTLGHSAF 76

>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5 Length = 780

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 4  DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
          ++Y++L V+K A+  +++++++KLA+K HPDKNPN+   A   F +I+ AYEVL D   R
Sbjct: 22 NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPN-AHGDFLKINRAYEVLKDEDLR 80
Query: 64 AIYDQYGEEGLKD 76
            YD+YGE+GL+D
Sbjct: 81 KKYDKYGEKGLED 93

>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5 Length = 210

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 34/73 (46%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 4  DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
          ++Y++L V+K A+  +++++++KLA+K HPDKNPN+   A   F +I+ AYEVL D   R
Sbjct: 3  NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPN-AHGDFLKINRAYEVLKDEDLR 61
Query: 64 AIYDQYGEEGLKD 76
            YD+YGE+GL+D
Sbjct: 62 KKYDKYGEKGLED 74

>pdb|2KQX|A Chain A, Nmr Structure Of The J-Domain (Residues 2-72) In The Escherichia Coli Cbpa Length = 73

Iteration: 1
 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 6/67 (8%)
Query: 4  DYYNILKVNKNATEDDLKKSYRKLAMKWHPD--KNPNDKKEAEARFKQISEAYEVLSDPQ 61
          DYY I+ V        +K +YR+LA K+HPD  K P+    AEARFK+++EA+EVLSD Q
Sbjct: 6  DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPD----AEARFKEVAEAWEVLSDEQ 61
Query: 62 KRAIYDQ 68
          +RA YDQ
Sbjct: 62 RRAEYDQ 68

>pdb|3LZ8|A Chain A, Structure Of A Putative Chaperone Dnaj From Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A Resolution. Length = 329

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 4  DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
          DYY IL V        +K +YR+LA K+HPD +  +  +AEA+FK ++EA+EVL D Q+R
Sbjct: 29 DYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKEN--DAEAKFKDLAEAWEVLKDEQRR 86
Query: 64 AIYDQ 68
          A YDQ
Sbjct: 87 AEYDQ 91

>pdb|2Y4U|A Chain A, Crystal Structure Of Human P58(Ipk) In Space Group P312 Length = 450

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 2/66 (3%)
Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPD--KNPNDKKEAEARFKQISEAYEVLSDPQ 61
           DYY IL V +NA + ++ K+YRKLA++WHPD  +N  +KK+AE +F  I+ A EVLSDP+
Sbjct: 383 DYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPE 442
Query: 62  KRAIYD 67
            R  +D
Sbjct: 443 XRKKFD 448

>pdb|2Y4T|A Chain A, Crystal Structure Of The Human Co-Chaperone P58(Ipk) Length = 450

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 2/66 (3%)
Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPD--KNPNDKKEAEARFKQISEAYEVLSDPQ 61
           DYY IL V +NA + ++ K+YRKLA++WHPD  +N  +KK+AE +F  I+ A EVLSDP+
Sbjct: 383 DYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPE 442
Query: 62  KRAIYD 67
            R  +D
Sbjct: 443 MRKKFD 448

>pdb|1XAO|A Chain A, Hsp40-Ydj1 Dimerization Domain Length = 121

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 244 YKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVT--DIISPGFELGIPGEGMPI 301
           +KRD +DL+   ++ L  A+ G   +L  + G  L + +   ++I+PG    I G+GMPI
Sbjct: 2   FKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPI 61
Query: 302 AREPGNRGDLRIKFEVKFP 320
            +  G  G+L IKF +KFP
Sbjct: 62  PKY-GGYGNLIIKFTIKFP 79

>pdb|2QSA|A Chain A, Crystal Structure Of J-Domain Of Dnaj Homolog Dnj-2 Precursor From C.Elegans Length = 109

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 6  YNILKVNKNA-TEDDLKKSYRKLAMKWHPD--KNPNDKKEAEARFKQISEAYEVLSDPQK 62
          Y++L+VN+    +  L K+YR LA K HPD  KN  +K  AE RF+ I+ AYE L D + 
Sbjct: 18 YDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEA 77
Query: 63 RAIYDQY 69
          +  YD Y
Sbjct: 78 KTNYDYY 84

>pdb|2L6L|A Chain A, Solution Structure Of Human J-Protein Co-Chaperone, Dph4 Length = 155

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 4  DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPND-----KKEAEARFKQISEAYEVLS 58
          D+Y+IL  + +A   DLK+ Y+KL + +HPDK   D      +E   +F +I +A+++L 
Sbjct: 11 DWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILG 70
Query: 59 DPQKRAIYD-QYGEEGLKDMPP 79
          + + +  YD Q  E+ L+++ P
Sbjct: 71 NEETKREYDLQRCEDDLRNVGP 92

>pdb|1WJZ|A Chain A, Soluiotn Structure Of J-Domain Of Mouse Dnaj Like Protein Length = 94

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 4  DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPND-----KKEAEARFKQISEAYEVLS 58
          D+Y+IL  + +A   DLK+ Y+KL + +HPDK   D      +E   +F +I +A+++L 
Sbjct: 17 DWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILG 76
Query: 59 DPQKRAIYD 67
          + + +  YD
Sbjct: 77 NEETKKKYD 85

>pdb|2YUA|A Chain A, Solution Structure Of The Dnaj Domain From Human Williams- Beuren Syndrome Chromosome Region 18 Protein Length = 99

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 6  YNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAI 65
          Y++L V   AT+  +K +Y +    +HPD+N    + AE RF +IS+AY VL     R  
Sbjct: 20 YDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAE-RFTRISQAYVVLGSATLRRK 78
Query: 66 YDQ 68
          YD+
Sbjct: 79 YDR 81

>pdb|2CTQ|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily C Menber 12 Length = 112

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 4  DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
          DYY +L  ++ ++ + +   ++  A++ HPDK+P + K  E  F+++ +A E+L++ + R
Sbjct: 21 DYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVET-FQKLQKAKEILTNEESR 79
Query: 64 AIYDQY 69
          A YD +
Sbjct: 80 ARYDHW 85

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	337
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	1e-92
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	2e-92
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	1e-84
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	5e-74
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	3e-51
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	6e-48
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	1e-47
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	1e-46
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	5e-45
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	7e-43
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	3e-04
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	3e-42
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	4e-41
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	2e-40
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	4e-40
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	8e-40
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	1e-39
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	3e-39
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	4e-39
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	8e-39
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	3e-38
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	3e-38
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	9e-38
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	1e-37
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	2e-37
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	2e-33
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	3e-32
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	1e-31
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	5e-29
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	5e-27
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	2e-26
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	3e-22
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	1e-21
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	1e-18
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	2e-18
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	2e-17
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	9e-15
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	1e-12
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	7e-12
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	5e-11
2guz_A	71	Mitochondrial import inner membrane translocase su	1e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A Length = 181

 Score =  272 bits (699), Expect = 1e-92
 Identities = 86/177 (48%), Positives = 124/177 (70%), Gaps = 1/177 (0%)

Query: 160 PPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQT-PESEILTIDVKPGWKKGTKITFP 218
           PPV   L  SLEE+YSG T+KMKIS   ++ +G+    E +ILTI+VK GWK+GTKITFP
Sbjct: 3   PPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFP 62

Query: 219 DKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDL 278
            +G++  N +PAD+VFV+ +KPH+++KRD +D+I   ++SL EAL G +V++ TLDGR +
Sbjct: 63  KEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTI 122

Query: 279 NIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL 335
            +   D+I PG    +PGEG+P+ + P  RGDL I+FEV FP ++    R  L++ L
Sbjct: 123 PVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL 179

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II} Length = 180

 Score =  272 bits (698), Expect = 2e-92
 Identities = 71/179 (39%), Positives = 105/179 (58%), Gaps = 2/179 (1%)

Query: 158 KPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITF 217
            P   E  L  +LEELY G  +K+K++R       +   E  I+ +++KPGWK GTK+T+
Sbjct: 2   APRSHEVPLLVTLEELYLGKRKKIKVTRKRFI-EHKVRNEENIVEVEIKPGWKDGTKLTY 60

Query: 218 PDKGN-EQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGR 276
             +G+ E P   P DLV +I  K H  + RD   LI+   + L  AL G +  + TLD R
Sbjct: 61  SGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMKVTIPLVRALTGFTCPVTTLDNR 120

Query: 277 DLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL 335
           +L I + +I++P     +P EGMPI  +PG +GDL ++F++ FP  LTPEQ+  +K AL
Sbjct: 121 NLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIKEAL 179

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A Length = 170

 Score =  252 bits (645), Expect = 1e-84
 Identities = 63/172 (36%), Positives = 92/172 (53%), Gaps = 5/172 (2%)

Query: 161 PVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDK 220
            V+  LP SLE+L+ G  +  KI R           E   + I +KPGWK GTKIT+ ++
Sbjct: 2   TVQVNLPVSLEDLFVGKKKSFKIGRKGPHG----ASEKTQIDIQLKPGWKAGTKITYKNQ 57

Query: 221 GNEQPNQL-PADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLN 279
           G+  P       L FVI EK H  +KRD +DLI    +S  E+L G S ++ T+DGR L 
Sbjct: 58  GDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLP 117

Query: 280 IAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGL 331
           ++    + P      PG+GMP  + P  RG+L +K++V +P  L   Q+  +
Sbjct: 118 LSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAI 169

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Length = 329

 Score =  230 bits (589), Expect = 5e-74
 Identities = 80/336 (23%), Positives = 132/336 (39%), Gaps = 51/336 (15%)

Query: 1   MGM-DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSD 59
           M + DYY IL V        +K +YR+LA K+HPD +     +AEA+FK ++EA+EVL D
Sbjct: 25  MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE--NDAEAKFKDLAEAWEVLKD 82

Query: 60  PQKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFG 119
            Q+RA YDQ  +                 +    + + F     +DIF+  FG       
Sbjct: 83  EQRRAEYDQLWQHR----NDPGFGRQRQTHEQSYSQQDF-----DDIFSSMFG------- 126

Query: 120 SAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPPVESKLPCSLEELYSGSTR 179
                                                 +   +E ++   LEE  +  TR
Sbjct: 127 -------------QQAHQRR-------------RQHAARGHDLEIEVAVFLEETLAEQTR 160

Query: 180 KMKISRTVVDANGR-QTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPA-DLVFVID 237
            +  +  V +  G  ++   + L + +  G   G +I    +G    N  P  DL  VI 
Sbjct: 161 TISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWLVIH 220

Query: 238 EKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGE 297
             PH ++    ++L +   ++  EA  G  V++ TL    + + V      G  L I G+
Sbjct: 221 IAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPGSQAGQRLRIKGK 279

Query: 298 GMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKR 333
           G+       + GDL    ++  PTK   + R   ++
Sbjct: 280 GLV---SKTHTGDLFAVIKIVMPTKPDEKARELWQQ 312

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Length = 99

 Score =  164 bits (416), Expect = 3e-51
 Identities = 46/96 (47%), Positives = 65/96 (67%)

Query: 4  DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
           YY IL V ++A+ DD+KK+YR+ A++WHPDKNP++K+ AE +FK+++EAYEVLSD  KR
Sbjct: 3  SYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKR 62

Query: 64 AIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFN 99
           IYD+YG EGL       S   + + G G      +
Sbjct: 63 EIYDRYGREGLTGTGTGPSRAEAGSGGPGLEHHHHH 98

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 92

 Score =  155 bits (394), Expect = 6e-48
 Identities = 43/85 (50%), Positives = 64/85 (75%), Gaps = 1/85 (1%)

Query: 1  MGM-DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSD 59
           GM +YY +L V  +A+ +D+KK+YRKLA++WHPDKNP++K+EAE +FK +SEAYEVLSD
Sbjct: 6  SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSD 65

Query: 60 PQKRAIYDQYGEEGLKDMPPSSSSG 84
           +KR++YD+ G +  +    +S   
Sbjct: 66 SKKRSLYDRAGCDSWRAGGGASGPS 90

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 82

 Score =  154 bits (391), Expect = 1e-47
 Identities = 46/76 (60%), Positives = 59/76 (77%), Gaps = 1/76 (1%)

Query: 1  MGM-DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSD 59
           GM DYY +L V + A+ + +KK+YRKLA+KWHPDKNP +K+EAE RFKQ++EAYEVLSD
Sbjct: 6  SGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSD 65

Query: 60 PQKRAIYDQYGEEGLK 75
           +KR IYD+YG     
Sbjct: 66 AKKRDIYDRYGSGPSS 81

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 77

 Score =  151 bits (385), Expect = 1e-46
 Identities = 40/75 (53%), Positives = 60/75 (80%), Gaps = 2/75 (2%)

Query: 1  MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
          MG DYY  L + + A+++++K++YR+ A+++HPDKN      AE +FK+I+EAY+VLSDP
Sbjct: 1  MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE--PGAEEKFKEIAEAYDVLSDP 58

Query: 61 QKRAIYDQYGEEGLK 75
          +KR I+D+YGEEGLK
Sbjct: 59 RKREIFDRYGEEGLK 73

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Length = 109

 Score =  148 bits (376), Expect = 5e-45
 Identities = 44/95 (46%), Positives = 62/95 (65%), Gaps = 1/95 (1%)

Query: 1   MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
            G   Y++L ++KNAT DD+KKSYRKLA+K+HPDKNP++  EA  +FK+I+ A+ +L+D 
Sbjct: 15  SGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDN-PEAADKFKEINNAHAILTDA 73

Query: 61  QKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNS 95
            KR IYD+YG  GL           +    SG +S
Sbjct: 74  TKRNIYDKYGSLGLYVAEQFGEENVNTYFVSGPSS 108

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1 Length = 248

 Score =  147 bits (374), Expect = 7e-43
 Identities = 47/142 (33%), Positives = 79/142 (55%), Gaps = 3/142 (2%)

Query: 193 RQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLI 252
           +   E +IL + V+PG K G +I F  + ++ P+ +P D+VF++ E+PH  +KRD +DL+
Sbjct: 106 KVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLV 165

Query: 253 VNHKVSLAEALGGTSVSLITLDGRDLNIAVT--DIISPGFELGIPGEGMPIAREPGNRGD 310
              ++ L  A+ G   +L  + G  L + +   ++I+PG    I G+GMPI +  G  G+
Sbjct: 166 YEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGG-YGN 224

Query: 311 LRIKFEVKFPTKLTPEQRAGLK 332
           L IKF +K P      +    K
Sbjct: 225 LIIKFTIKDPENHFTSEENLKK 246

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1 Length = 248

 Score = 40.6 bits (96), Expect = 3e-04
 Identities = 10/33 (30%), Positives = 22/33 (66%)

Query: 156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVV 188
           P++   ++ ++  SLEELY G T K+ +++ ++
Sbjct: 8   PQRGKDIKHEISASLEELYKGRTAKLALNKQIL 40

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Length = 210

 Score =  144 bits (365), Expect = 3e-42
 Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 6/120 (5%)

Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
           ++Y++L V+K A+  +++++++KLA+K HPDKNPN+   A   F +I+ AYEVL D   R
Sbjct: 3   NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN-PNAHGDFLKINRAYEVLKDEDLR 61

Query: 64  AIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGP 123
             YD+YGE+GL+D     + G  Y + S          +  +I             S   
Sbjct: 62  KKYDKYGEKGLED-----NQGGQYESWSYYRYDFGIYDDDPEIITLERREFDAAVNSGEL 116

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Length = 103

 Score =  138 bits (350), Expect = 4e-41
 Identities = 51/109 (46%), Positives = 66/109 (60%), Gaps = 14/109 (12%)

Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
           DYY IL V+K A E +++K+Y++LAMK+HPD+N  D KEAEA+FK+I EAYEVL+D QKR
Sbjct: 4   DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGD-KEAEAKFKEIKEAYEVLTDSQKR 62

Query: 64  AIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFG 112
           A YDQYG                +  G  G        +  DIF + FG
Sbjct: 63  AAYDQYGHAA-------------FEQGGMGGGGFGGGADFSDIFGDVFG 98

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 112

 Score =  137 bits (346), Expect = 2e-40
 Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 1/92 (1%)

Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
           DYY +L  ++ ++ + +   ++  A++ HPDK+P +  +A   F+++ +A E+L++ + R
Sbjct: 21  DYYTLLGCDELSSVEQILAEFKVRALECHPDKHPEN-PKAVETFQKLQKAKEILTNEESR 79

Query: 64  AIYDQYGEEGLKDMPPSSSSGYSYANGSGGNS 95
           A YD +    +        +       SG +S
Sbjct: 80  ARYDHWRRSQMSMPFQQWEALNDSVKTSGPSS 111

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Length = 73

 Score =  134 bits (340), Expect = 4e-40
 Identities = 40/69 (57%), Positives = 55/69 (79%), Gaps = 4/69 (5%)

Query: 4  DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
           YY++L V  +A++++LKK+YRK+A+K+HPDKNP+       +FKQIS+AYEVLSD +KR
Sbjct: 9  GYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPD----GAEQFKQISQAYEVLSDEKKR 64

Query: 64 AIYDQYGEE 72
           IYDQ GEE
Sbjct: 65 QIYDQGGEE 73

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Length = 92

 Score =  134 bits (340), Expect = 8e-40
 Identities = 42/88 (47%), Positives = 56/88 (63%), Gaps = 5/88 (5%)

Query: 4  DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
            Y++L V+ +A E +LKK YRK A+K+HPDK   D +    +FK+ISEA+E+L+DPQKR
Sbjct: 9  KLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTE----KFKEISEAFEILNDPQKR 64

Query: 64 AIYDQYGEEGLKD-MPPSSSSGYSYANG 90
           IYDQYG E  +   P     G   A G
Sbjct: 65 EIYDQYGLEAARSGGPSFGPGGPGGAGG 92

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 88

 Score =  134 bits (338), Expect = 1e-39
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)

Query: 4  DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
          +  ++++      E + KK  R+L +KWHPDKNP +   A   FK +      L   +K+
Sbjct: 17 EVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRL---EKQ 73

Query: 64 AIYDQYGEEGLK 75
          A  DQ  +   +
Sbjct: 74 AFLDQNADRASR 85

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Length = 88

 Score =  132 bits (335), Expect = 3e-39
 Identities = 36/75 (48%), Positives = 51/75 (68%), Gaps = 2/75 (2%)

Query: 1  MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
          +  D Y +L V++ A++ D+KK+Y+KLA +WHPDKN +    AE RF QIS+AYE+LS+ 
Sbjct: 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD--PGAEDRFIQISKAYEILSNE 72

Query: 61 QKRAIYDQYGEEGLK 75
          +KR  YD YG     
Sbjct: 73 EKRTNYDHYGSGPSS 87

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Length = 155

 Score =  134 bits (340), Expect = 4e-39
 Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 22/134 (16%)

Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPND-----KKEAEARFKQISEAYEVLS 58
           D+Y+IL  + +A   DLK+ Y+KL + +HPDK   D      +E   +F +I +A+++L 
Sbjct: 11  DWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILG 70

Query: 59  DPQKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGF 118
           + + +  YD    E                   G           E++     G   F  
Sbjct: 71  NEETKREYDLQRCE-------------DDLRNVGPVDAQV---YLEEMSWN-EGDHSFYL 113

Query: 119 GSAGPGKSTRFQSE 132
                GK +  + E
Sbjct: 114 SCRCGGKYSVSKDE 127

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score =  131 bits (332), Expect = 8e-39
 Identities = 36/70 (51%), Positives = 50/70 (71%), Gaps = 1/70 (1%)

Query: 4  DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
          DYY IL V +NA++ ++KK+Y +LA K+HPD N +D  +A+ +F Q++EAYEVLSD  KR
Sbjct: 8  DYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDD-PKAKEKFSQLAEAYEVLSDEVKR 66

Query: 64 AIYDQYGEEG 73
            YD YG   
Sbjct: 67 KQYDAYGSGP 76

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score =  130 bits (328), Expect = 3e-38
 Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 2/72 (2%)

Query: 4  DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
          DYY IL V++ A+++DLKK+YR+LA+K+HPDKN      A   FK I  AY VLS+P+KR
Sbjct: 8  DYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHA--PGATEAFKAIGTAYAVLSNPEKR 65

Query: 64 AIYDQYGEEGLK 75
            YDQ+G     
Sbjct: 66 KQYDQFGSGPSS 77

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Length = 109

 Score =  130 bits (330), Expect = 3e-38
 Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 4/77 (5%)

Query: 1  MGM-DYYNILKVNKNA-TEDDLKKSYRKLAMKWHPDKNPNDK--KEAEARFKQISEAYEV 56
           G+ + Y++L+VN+    +  L K+YR LA K HPD+  N +    AE RF+ I+ AYE 
Sbjct: 12 CGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYET 71

Query: 57 LSDPQKRAIYDQYGEEG 73
          L D + +  YD Y +  
Sbjct: 72 LKDDEAKTNYDYYLDHP 88

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99

 Score =  129 bits (326), Expect = 9e-38
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 1/70 (1%)

Query: 4  DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
            Y++L V   AT+  +K +Y +    +HPD+N     EA  RF +IS+AY VL     R
Sbjct: 18 ALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGS-AEAAERFTRISQAYVVLGSATLR 76

Query: 64 AIYDQYGEEG 73
            YD+     
Sbjct: 77 RKYDRGLLSD 86

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Length = 94

 Score =  129 bits (325), Expect = 1e-37
 Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 5/75 (6%)

Query: 4  DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPND-----KKEAEARFKQISEAYEVLS 58
          D+Y+IL  + +A   DLK+ Y+KL + +HPDK   D      +E   +F +I +A+++L 
Sbjct: 17 DWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILG 76

Query: 59 DPQKRAIYDQYGEEG 73
          + + +  YD      
Sbjct: 77 NEETKKKYDLQRSGP 91

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score =  128 bits (324), Expect = 2e-37
 Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 9/90 (10%)

Query: 4  DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
           YY+IL V K+A+E  +KK++ KLAMK+HPDKN +   +AEA+F++I+EAYE LSD  +R
Sbjct: 8  SYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS--PDAEAKFREIAEAYETLSDANRR 65

Query: 64 AIYDQYGEEGLKDMPPSSSSGYSYANGSGG 93
            YD  G           +SG   +  S G
Sbjct: 66 KEYDTLGHSAF-------TSGKGQSGPSSG 88

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae} Length = 121

 Score =  118 bits (299), Expect = 2e-33
 Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 5/96 (5%)

Query: 244 YKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVT--DIISPGFELGIPGEGMPI 301
           +KRD +DL+   ++ L  A+ G   +L  + G  L + +   ++I+PG    I G+GMPI
Sbjct: 2   FKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPI 61

Query: 302 AREPGNRGDLRIKFEVKFPTK--LTPEQRAGLKRAL 335
            +  G  G+L IKF +KFP     + E    L+  L
Sbjct: 62  PKYGG-YGNLIIKFTIKFPENHFTSEENLKKLEEIL 96

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114

 Score =  115 bits (290), Expect = 3e-32
 Identities = 25/116 (21%), Positives = 51/116 (43%), Gaps = 16/116 (13%)

Query: 3   MDYYNILKVNKNATED--DLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
           +   ++L + ++A  +   ++K+Y K   ++HPDK  +     E + K+++  Y+ + D 
Sbjct: 8   LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-----EEKMKKMNTLYKKMEDG 62

Query: 61  QKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFA-EFFGSSP 115
            K A    +G        P+         G+    + +N  N E++F  E   SS 
Sbjct: 63  VKYAHQPDFGGFWDATEIPTY--------GTDEWEQWWNAFNEENLFCSEEMPSSD 110

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Length = 174

 Score =  115 bits (290), Expect = 1e-31
 Identities = 19/111 (17%), Positives = 47/111 (42%), Gaps = 23/111 (20%)

Query: 3   MDYYNILKVNKNATED--DLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
           +   ++L + ++A  +   ++K+Y K   ++HPDK  +     E + K+++  Y+ + D 
Sbjct: 11  LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-----EEKMKKMNTLYKKMEDG 65

Query: 61  QKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFF 111
            K A    +G                + + +   +   NP   + I+ + +
Sbjct: 66  VKYAHQPDFG---------------GFWDATEVFASSLNP-GVDAIYCKQW 100

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score =  106 bits (266), Expect = 5e-29
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 4  DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
          D +++L V   A+ D++ K+YRKLA+  HPDK       +E  FK +  A   L    K 
Sbjct: 28 DSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVA--PGSEDAFKAVVNARTALLKNIKS 85

Query: 64 AIYD 67
              
Sbjct: 86 GPSS 89

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450

 Score =  109 bits (274), Expect = 5e-27
 Identities = 34/67 (50%), Positives = 47/67 (70%), Gaps = 2/67 (2%)

Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPDK--NPNDKKEAEARFKQISEAYEVLSDPQ 61
           DYY IL V +NA + ++ K+YRKLA++WHPD   N  +KK+AE +F  I+ A EVLSDP+
Sbjct: 383 DYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPE 442

Query: 62  KRAIYDQ 68
            R  +D 
Sbjct: 443 MRKKFDD 449

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780

 Score =  109 bits (272), Expect = 2e-26
 Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 7/132 (5%)

Query: 4   DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
           ++Y++L V+K A+  +++++++KLA+K HPDKNPN+   A   F +I+ AYEVL D   R
Sbjct: 22  NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN-PNAHGDFLKINRAYEVLKDEDLR 80

Query: 64  AIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGP 123
             YD+YGE+GL+D        +SY          F   + +               ++G 
Sbjct: 81  KKYDKYGEKGLEDNQGGQYESWSYYRY------DFGIYDDDPEIITLERREFDAAVNSGE 134

Query: 124 GKSTRFQSEGGG 135
                F S G  
Sbjct: 135 LWFVNFYSPGSS 146

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Length = 171

 Score = 90.8 bits (225), Expect = 3e-22
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 6/71 (8%)

Query: 3  MDYYNILKVNKNATED--DLKKSYRKLAMKWHPDKNPND----KKEAEARFKQISEAYEV 56
          MDY+ +  +      D   L   ++ L  ++HPDK  +     +  A  +   I++A++ 
Sbjct: 1  MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQT 60

Query: 57 LSDPQKRAIYD 67
          L  P  RA Y 
Sbjct: 61 LRHPLMRAEYL 71

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Length = 181

 Score = 81.2 bits (200), Expect = 1e-18
 Identities = 16/81 (19%), Positives = 29/81 (35%), Gaps = 11/81 (13%)

Query: 1  MGMDYYNILKVNKNAT-------EDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEA 53
              +Y +               +  L+K YR+L  + HPD           +   +++A
Sbjct: 9  FTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ----GSEQSSTLNQA 64

Query: 54 YEVLSDPQKRAIYDQYGEEGL 74
          Y  L DP +R+ Y       +
Sbjct: 65 YHTLKDPLRRSQYMLKLLRNI 85

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182

 Score = 81.0 bits (199), Expect = 2e-18
 Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 2/67 (2%)

Query: 2   GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPND--KKEAEARFKQISEAYEVLSD 59
           G   +  + +    T + +KK YRK  +  HPDK      ++ A+  F ++++A+    +
Sbjct: 116 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFEN 175

Query: 60  PQKRAIY 66
             ++ +Y
Sbjct: 176 QGQKPLY 182

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Length = 207

 Score = 79.0 bits (194), Expect = 2e-17
 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 6/71 (8%)

Query: 3   MDYYNILKVNKNATED--DLKKSYRKLAMKWHPDKNPND----KKEAEARFKQISEAYEV 56
            DY++++  N++   D   L+  Y++L    HPD         K  +E     +++AY+ 
Sbjct: 43  RDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKT 102

Query: 57  LSDPQKRAIYD 67
           L  P  R +Y 
Sbjct: 103 LLAPLSRGLYL 113

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Length = 79

 Score = 67.7 bits (165), Expect = 9e-15
 Identities = 10/69 (14%), Positives = 28/69 (40%), Gaps = 7/69 (10%)

Query: 4  DYYNILKVNKNATED--DLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQ 61
              +LK+ +    D   ++++Y++ ++  HPDK  +      A  ++++  +       
Sbjct: 12 RLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS-----HALMQELNSLWGTFKTEV 66

Query: 62 KRAIYDQYG 70
               +  G
Sbjct: 67 YNLRMNLGG 75

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92

 Score = 62.3 bits (151), Expect = 1e-12
 Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 6  YNILKVNKNATEDDLKKSYRKLAMKWHPDKNPND--KKEAEARFKQISEAYEVLSD 59
          +  + +    T + +KK YRK  +  HP K      ++ A+  F ++++A+    +
Sbjct: 36 WKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp} Length = 109

 Score = 60.3 bits (147), Expect = 7e-12
 Identities = 21/95 (22%), Positives = 39/95 (41%), Gaps = 8/95 (8%)

Query: 240 PHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGR-DLNI-AVTDIISPGFELGIPGE 297
            H ++    ++L +   ++  EA  G  V++ TL     L +   +     G  L I G+
Sbjct: 3   AHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGS---QAGQRLRIKGK 59

Query: 298 GMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLK 332
           G+       + GDL    ++  PTK   + R   +
Sbjct: 60  GLV---SKTHTGDLFAVIKIVMPTKPDEKARELWQ 91

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106

 Score = 58.1 bits (140), Expect = 5e-11
 Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 6/59 (10%)

Query: 6   YNILKVNKNATEDDLKKSYRKLAMKWHPDKNPND------KKEAEARFKQISEAYEVLS 58
           +  + +      + ++KSY++  +  HPDK          K  AE  F+ + EA++  +
Sbjct: 43  WKPVPLMDMIEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFN 101

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Length = 71

 Score = 55.8 bits (135), Expect = 1e-10
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 6/61 (9%)

Query: 4  DYYNILKVNKNA-TEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQK 62
          +   IL + +N  T+  LK+ +RK+ +  HPDK  +          +I+EA + L     
Sbjct: 15 EALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSPFL-----ATKINEAKDFLEKRGI 69

Query: 63 R 63
           
Sbjct: 70 S 70

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.4 bits (122), Expect = 3e-07
 Identities = 54/385 (14%), Positives = 100/385 (25%), Gaps = 118/385 (30%)

Query: 3   MDYYN--ILKVNKNA---------TEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQIS 51
             Y    IL V ++A          +D  K    K  +  H   + +      +   ++ 
Sbjct: 14  HQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEID-HIIMSKDA----VSGTLRL- 67

Query: 52  EAYEVLSDPQKRAIYDQYGEEGLKD--------------MPPSSSSGY-SYANGSGGNSK 96
             +  L   Q+  +  ++ EE L+                P   +  Y    +    +++
Sbjct: 68  --FWTLLSKQEE-MVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQ 124

Query: 97  GFNPRNA--EDIFAEF----FGSSPFGF----GSAGPGKST---------RFQSEGGGTF 137
            F   N      + +         P       G  G GK+          + Q +     
Sbjct: 125 VFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCK----- 179

Query: 138 GGFGMGENIF-----RTYSDGSVPRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANG 192
               M   IF        S  +V              L++L              +D N 
Sbjct: 180 ----MDFKIFWLNLKNCNSPETVLEM-----------LQKLL-----------YQIDPNW 213

Query: 193 RQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLI 252
               +            +   +     K           L+ V+     +V   ++    
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRLLKSK------PYENCLL-VLL----NVQ--NAKAW- 259

Query: 253 VNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLR 312
                    A   +   L+T   R     VTD +S      I  +   +   P     L 
Sbjct: 260 --------NAFNLSCKILLT--TRF--KQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL 307

Query: 313 IKF-EVKFPTKLTPEQRAGLKRALG 336
           +K+ + + P  L  E      R L 
Sbjct: 308 LKYLDCR-PQDLPREVLTTNPRRLS 331

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 1e-04
 Identities = 40/313 (12%), Positives = 88/313 (28%), Gaps = 97/313 (30%)

Query: 9   LKVNKNATEDD----LKKSYRKLAMKW-----HPDKNPNDKKEAEARFKQI--SEAYE-- 55
           L +    + +     L+K   ++   W     H           +A  +++  S+ YE  
Sbjct: 187 LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC 246

Query: 56  --VLSDPQKRAIYDQYG----------EEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNA 103
             VL + Q    ++ +            + + D     S+  +       +S    P   
Sbjct: 247 LLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTD---FLSAATTTHISLDHHSMTLTPDEV 303

Query: 104 EDIFAEFFGS------------SPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYS 151
           + +  ++               +P                +G  T+      +N ++  +
Sbjct: 304 KSLLLKYLDCRPQDLPREVLTTNPRRLSIIA-----ESIRDGLATW------DN-WKHVN 351

Query: 152 DGSVPRKPPPVESKLPCSLEELYSGSTRKM-----------KISRTVV----DANGRQTP 196
                     + + +  SL  L     RKM            I   ++        +   
Sbjct: 352 C-------DKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDV 404

Query: 197 ESEILTIDVKPG----WKKGTKITFPDKGNEQPNQLPADLVFVIDEKP--H----DVY-- 244
              ++    K        K + I+ P         +  +L   ++ +   H    D Y  
Sbjct: 405 M-VVVNKLHKYSLVEKQPKESTISIPS--------IYLELKVKLENEYALHRSIVDHYNI 455

Query: 245 --KRDSNDLIVNH 255
               DS+DLI  +
Sbjct: 456 PKTFDSDDLIPPY 468

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	337
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	100.0
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	100.0
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	100.0
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	100.0
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	100.0
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	99.94
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	99.93
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	99.9
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	99.9
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	99.88
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	99.88
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	99.87
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	99.87
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	99.87
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	99.86
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	99.86
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	99.86
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	99.85
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	99.85
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	99.85
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	99.84
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	99.81
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	99.8
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	99.79
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	99.76
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	99.76
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	99.74
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	99.74
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	99.73
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	99.73
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	99.7
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	99.7
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	99.68
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	99.68
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	99.68
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	99.66
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	99.63
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	99.63
2guz_A	71	Mitochondrial import inner membrane translocase su	99.62
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	99.4
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	99.34
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	99.11
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	99.11
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	99.09
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	99.07
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	99.06
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	98.97
2guz_B	65	Mitochondrial import inner membrane translocase su	98.81
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	89.56

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=100.00  E-value=5.4e-68  Score=500.87  Aligned_cols=286  Identities=27%  Similarity=0.399  Sum_probs=163.7

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCCC
Q 019662            3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSSS   82 (337)
Q Consensus         3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~~   82 (337)
                      +|||++|||+++|+.+|||+|||+||++||||+|+++  .|+++|++|++||++|+||.+|+.||+|+......++   +
T Consensus        28 ~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~--~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~---~  102 (329)
T 3lz8_A           28 KDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKEN--DAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGF---G  102 (329)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCCh--HHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCc---c
Confidence            7999999999999999999999999999999999863  6889999999999999999999999999654221111   0


Q ss_pred             CCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCCCe
Q 019662           83 SGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPPV  162 (337)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  162 (337)
                      ++++..+ +     .|.+.++.|+|++|||+...+                         + +       ...++++.|+
T Consensus       103 ~~~~~~~-~-----~f~~~~f~diF~~~Fg~~g~~-------------------------~-~-------~~~~~~g~Dl  143 (329)
T 3lz8_A          103 RQRQTHE-Q-----SYSQQDFDDIFSSMFGQQAHQ-------------------------R-R-------RQHAARGHDL  143 (329)
T ss_dssp             -------------------------------------------------------------------------CCCCCCE
T ss_pred             ccccccc-C-----CcCCCchhhhhHhhhcCcCCC-------------------------C-C-------CCCcCCCCCE
Confidence            0010000 0     122235778999998741000                         0 0       1124678999


Q ss_pred             eeeeeechhhheeCceEEEEEEEEEEcCCCeeeec-ceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeC
Q 019662          163 ESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPE-SEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKP  240 (337)
Q Consensus       163 ~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~-~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~  240 (337)
                      .+++.|||+|+|.|+++.|.+.+.+|++.|+++.+ .++++|+||||+++|++|+|+|+|++.+ ++.+|||||+|+|++
T Consensus       144 ~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~gg~~GDL~v~I~v~~  223 (329)
T 3lz8_A          144 EIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWLVIHIAP  223 (329)
T ss_dssp             EEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC---CCCCCEEEEECCCC
T ss_pred             EEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCCCCCCCEEEEcccccCCCCCCCCCcEEEEEEEec
Confidence            99999999999999999999999999988865443 6789999999999999999999999974 567999999999999


Q ss_pred             CCccccCCCceEEEEeeCHHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECC
Q 019662          241 HDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFP  320 (337)
Q Consensus       241 ~~~f~r~g~dL~~~~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P  320 (337)
                      |+.|+|+|+||+++++|||+||++|++++|+||||+ +.|+||+++++|+++||+|+|||..   +.+|||||+|+|.||
T Consensus       224 h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~-v~l~ip~gt~~g~~~rl~G~GmP~~---~~rGDL~v~~~V~~P  299 (329)
T 3lz8_A          224 HPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPGSQAGQRLRIKGKGLVSK---THTGDLFAVIKIVMP  299 (329)
T ss_dssp             CSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTTCCTTCEEEETTCSCBCS---SCBCCEEEEEEECCC
T ss_pred             CCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCC-EEEEECCCCCCCCEEEEcCCCCCCC---CCCCCEEEEEEEECC
Confidence            999999999999999999999999999999999997 7999999999999999999999975   369999999999999


Q ss_pred             CCCCHHHHHHHHHHhC
Q 019662          321 TKLTPEQRAGLKRALG  336 (337)
Q Consensus       321 ~~l~~~~~~~l~~~l~  336 (337)
                      ++||++|+++|+++..
T Consensus       300 ~~l~~~q~~~l~~~~~  315 (329)
T 3lz8_A          300 TKPDEKARELWQQLAA  315 (329)
T ss_dssp             SSCCHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHh
Confidence            9999999999998753

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=7.7e-47  Score=328.34  Aligned_cols=178  Identities=39%  Similarity=0.738  Sum_probs=167.0

Q ss_pred             CCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCC-CCCCCCccEEEEE
Q 019662          158 KPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNE-QPNQLPADLVFVI  236 (337)
Q Consensus       158 ~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~-~~~~~~GDL~v~i  236 (337)
                      ++.|+.+++.|||+|||+|+++++.+.+.+.|++| .+.+.++++|+||||+++|++|+|+|+|++ .+++.+|||||+|
T Consensus         2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g-~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i   80 (180)
T 2q2g_A            2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHK-VRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLII   80 (180)
T ss_dssp             --CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTE-EEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEE
T ss_pred             CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCc-eEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEE
Confidence            36799999999999999999999999998887776 678889999999999999999999999999 5888999999999


Q ss_pred             EeeCCCccccCCCceEEEEeeCHHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEE
Q 019662          237 DEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFE  316 (337)
Q Consensus       237 ~v~~~~~f~r~g~dL~~~~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~  316 (337)
                      ++++|+.|+|+|+||+++++|||+||++|+++.|+|+||+.+.|++|+++++|+++||+|+|||..++++.+|||||+|+
T Consensus        81 ~~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~  160 (180)
T 2q2g_A           81 QTKTHPRFTRDDCHLIMKVTIPLVRALTGFTCPVTTLDNRNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFD  160 (180)
T ss_dssp             EECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEEECTTCCEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEE
T ss_pred             EEEecccEEEcCCEEEEEEEcCHHHHhCCCEEEeeCCCCCEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEE
Confidence            99999999999999999999999999999999999999988999999999999999999999998764567899999999


Q ss_pred             EECCCCCCHHHHHHHHHHhC
Q 019662          317 VKFPTKLTPEQRAGLKRALG  336 (337)
Q Consensus       317 v~~P~~l~~~~~~~l~~~l~  336 (337)
                      |.||++||++|+++|+++||
T Consensus       161 V~~P~~Ls~~q~~~l~~~~p  180 (180)
T 2q2g_A          161 ICFPKSLTPEQKKLIKEALD  180 (180)
T ss_dssp             EECCSCCCHHHHHHHHHHC-
T ss_pred             EECCCCCCHHHHHHHHHhcC
Confidence            99999999999999999986

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A

Probab=100.00  E-value=1e-46  Score=327.68  Aligned_cols=178  Identities=48%  Similarity=0.877  Sum_probs=163.6

Q ss_pred             CCCeeeeeeechhhheeCceEEEEEEEEEE--cCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEEE
Q 019662          159 PPPVESKLPCSLEELYSGSTRKMKISRTVV--DANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVI  236 (337)
Q Consensus       159 ~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~--~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i  236 (337)
                      ++|+.+++.|||+|||+|+++++.+.+.+.  +|.| ++.+.++++|+||||+.+|++|+|+|+|++.+++.+|||||+|
T Consensus         2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g-~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~g~~GDl~v~i   80 (181)
T 3agx_A            2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKS-IRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVL   80 (181)
T ss_dssp             ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSC-EEEEEEEEEEEECTTCCTTCEEEETTCSCCCSSSCCCCEEEEE
T ss_pred             CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCce-EEEEeEEEEEEECCCccCCcEEEEeeccccCCCCCcccEEEEE
Confidence            368999999999999999999999986654  4455 6788899999999999999999999999999888999999999


Q ss_pred             EeeCCCccccCCCceEEEEeeCHHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEE
Q 019662          237 DEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFE  316 (337)
Q Consensus       237 ~v~~~~~f~r~g~dL~~~~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~  316 (337)
                      ++++|+.|+|+|+||+++++|||+||++|+++.|+|+||+.+.|++|+++++|+++||+|+|||..++++.+|||||+|+
T Consensus        81 ~~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~  160 (181)
T 3agx_A           81 KDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFE  160 (181)
T ss_dssp             EECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEE
T ss_pred             EEeccccceeeCCcEEEEEEcCHHHHhCCCEEEeECCCCCEEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEE
Confidence            99999999999999999999999999999999999999988999999999999999999999998754567899999999


Q ss_pred             EECCCCCCHHHHHHHHHHhCC
Q 019662          317 VKFPTKLTPEQRAGLKRALGG  337 (337)
Q Consensus       317 v~~P~~l~~~~~~~l~~~l~~  337 (337)
                      |.||++||++|+++|+++||.
T Consensus       161 V~~P~~ls~~q~~~l~~~~~~  181 (181)
T 3agx_A          161 VIFPERIPQTSRTVLEQVLPI  181 (181)
T ss_dssp             EECCSCCCHHHHHHHHHHSCC
T ss_pred             EECCCCCCHHHHHHHHHhccC
Confidence            999999999999999999974

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A

Probab=100.00  E-value=3.3e-44  Score=309.01  Aligned_cols=169  Identities=37%  Similarity=0.683  Sum_probs=156.9

Q ss_pred             CCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCC-CCCCCCccEEEEEEe
Q 019662          160 PPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNE-QPNQLPADLVFVIDE  238 (337)
Q Consensus       160 ~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~-~~~~~~GDL~v~i~v  238 (337)
                      +|+.+++.|||+|||+|+++++.+.+..  ++|+.  +.++++|+||||+.+|++|+|+|+|++ .+++.+|||||+|++
T Consensus         1 ~d~~~~l~islee~~~G~~k~i~~~~~~--~~G~~--~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v   76 (170)
T 1c3g_A            1 ETVQVNLPVSLEDLFVGKKKSFKIGRKG--PHGAS--EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQE   76 (170)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEE--TTTEE--EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEE
T ss_pred             CCEEEEEEeEHHHhhCCcEEEEEEEEec--CCCcE--EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEE
Confidence            3788999999999999999999998873  46744  778999999999999999999999996 477889999999999


Q ss_pred             eCCCccccCCCceEEEEeeCHHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEE
Q 019662          239 KPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVK  318 (337)
Q Consensus       239 ~~~~~f~r~g~dL~~~~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~  318 (337)
                      ++|+.|+|+|+||+++++|||+||++|+++.|+|+||+.+.|++|+++++|+++||+|+|||..++++.+|||||+|+|.
T Consensus        77 ~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~v~tldG~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~  156 (170)
T 1c3g_A           77 KSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVD  156 (170)
T ss_dssp             CCCSSEEEETTEEEEEECCBHHHHHHCEEEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCB
T ss_pred             ccCCccEEeCCcEeEEEEcCHHHHhCCCeEEeeCCCCCEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEE
Confidence            99999999999999999999999999999999999998899999999999999999999999876455789999999999


Q ss_pred             CCCCCCHHHHHHHH
Q 019662          319 FPTKLTPEQRAGLK  332 (337)
Q Consensus       319 ~P~~l~~~~~~~l~  332 (337)
                      ||++||++|+++|+
T Consensus       157 ~P~~Ls~~q~~~l~  170 (170)
T 1c3g_A          157 YPISLNDAQKRAID  170 (170)
T ss_dssp             CCSSCCTTHHHHTC
T ss_pred             CCCCCCHHHHHhhC
Confidence            99999999998863

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=100.00  E-value=5.6e-43  Score=318.60  Aligned_cols=176  Identities=33%  Similarity=0.658  Sum_probs=150.4

Q ss_pred             CCCCCCeeeeeeechhhheeCceEEEEEEEEEE----cCC----------------Ce----------------------
Q 019662          156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVV----DAN----------------GR----------------------  193 (337)
Q Consensus       156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g~----------------G~----------------------  193 (337)
                      ++++.|+.+.|.|||+|||+|++++|.+.+.+.    +|+                |.                      
T Consensus         8 ~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~   87 (248)
T 1nlt_A            8 PQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCH   87 (248)
T ss_dssp             CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCS
T ss_pred             CCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCceEEEEEEcCCCCC
Confidence            467899999999999999999999999987643    121                11                      


Q ss_pred             -------------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEEEEeeCCCccccCCCceEEE
Q 019662          194 -------------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVN  254 (337)
Q Consensus       194 -------------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~  254 (337)
                                         ++.+.++++|+||||+.+|++|+|+|+|++.+++.+|||||+|++++|+.|+|+|+||+++
T Consensus        88 G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~~  167 (248)
T 1nlt_A           88 GTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYE  167 (248)
T ss_dssp             SSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEEE
T ss_pred             CcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEEEE
Confidence                               3456789999999999999999999999999888999999999999999999999999999


Q ss_pred             EeeCHHHHhCCcEEEEecCCCcEEEEEcCCC--CCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCC--CCHHHHHH
Q 019662          255 HKVSLAEALGGTSVSLITLDGRDLNIAVTDI--ISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTK--LTPEQRAG  330 (337)
Q Consensus       255 ~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~--~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~--l~~~~~~~  330 (337)
                      ++|||+|||+|++++|+||||+.+.|+||++  +++|+++||+|+|||..+++ .+|||||+|+|.||++  ||++|+++
T Consensus       168 ~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~-~~GDL~V~~~V~~P~~~~Ls~~q~~~  246 (248)
T 1nlt_A          168 AEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPENHFTSEENLKK  246 (248)
T ss_dssp             EEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSC-SBCCEEEEEEEECCC-----------
T ss_pred             EEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCC-CcCCEEEEEEEECCCCCCCCHHHHHh
Confidence            9999999999999999999998899999987  99999999999999987644 6899999999999999  99999998


Q ss_pred             HH
Q 019662          331 LK  332 (337)
Q Consensus       331 l~  332 (337)
                      |+
T Consensus       247 l~  248 (248)
T 1nlt_A          247 LE  248 (248)
T ss_dssp             --
T ss_pred             hC
Confidence            75

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}

Probab=99.94  E-value=1.8e-26  Score=183.64  Aligned_cols=94  Identities=22%  Similarity=0.289  Sum_probs=87.7

Q ss_pred             eCCCccccCCCceEEEEeeCHHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEE
Q 019662          239 KPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVK  318 (337)
Q Consensus       239 ~~~~~f~r~g~dL~~~~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~  318 (337)
                      ++|+.|+|+|+||+++++|||.||++|+++.|+|+||. +.|+||+++++|+++||+|+|||. .  +.+|||||+|+|.
T Consensus         2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~-~~v~ip~g~~~G~~~rl~G~G~p~-~--~~~GDL~v~~~V~   77 (109)
T 3i38_A            2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPGSQAGQRLRIKGKGLVS-K--THTGDLFAVIKIV   77 (109)
T ss_dssp             --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTTCCTTCEEEETTCSCBC-S--SCBCCEEEEEEEC
T ss_pred             CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCC-EEEeeCCCcCcCeEEEECCccCCC-C--CCCcCEEEEEEEE
Confidence            68999999999999999999999999999999999994 999999999999999999999997 3  2799999999999


Q ss_pred             CCCCCCHHHHHHHHHHhC
Q 019662          319 FPTKLTPEQRAGLKRALG  336 (337)
Q Consensus       319 ~P~~l~~~~~~~l~~~l~  336 (337)
                      ||++|+++|+++|++++.
T Consensus        78 ~P~~Ls~~q~~~l~~l~~   95 (109)
T 3i38_A           78 MPTKPDEKARELWQQLAA   95 (109)
T ss_dssp             CCSSCCHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHh
Confidence            999999999999999863

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}

Probab=99.93  E-value=2e-25  Score=181.13  Aligned_cols=93  Identities=33%  Similarity=0.579  Sum_probs=84.5

Q ss_pred             ccccCCCceEEEEeeCHHHHhCCcEEEEecCCCcEEEEEcCCC--CCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECC
Q 019662          243 VYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDI--ISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFP  320 (337)
Q Consensus       243 ~f~r~g~dL~~~~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~--~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P  320 (337)
                      .|+|+|+||+++++|||.+|++|+++.|+|+||+.+.|+||++  +++|+++||+|+|||..+++ .+|||||+|+|.||
T Consensus         1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~-~~GDL~V~~~V~~P   79 (121)
T 1xao_A            1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKFP   79 (121)
T ss_dssp             CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC-------CCCEEEEEEEECC
T ss_pred             CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECC
Confidence            4899999999999999999999999999999998899999988  99999999999999987643 78999999999999


Q ss_pred             CC--CCHHHHHHHHHHhC
Q 019662          321 TK--LTPEQRAGLKRALG  336 (337)
Q Consensus       321 ~~--l~~~~~~~l~~~l~  336 (337)
                      +.  |+++|+++|+++++
T Consensus        80 ~~~~ls~~q~~~l~~l~~   97 (121)
T 1xao_A           80 ENHFTSEENLKKLEEILP   97 (121)
T ss_dssp             CTTCSCHHHHHHHHHHSC
T ss_pred             CCCCCCHHHHHHHHHHcc
Confidence            99  99999999999987

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A

Probab=99.90  E-value=7e-25  Score=173.13  Aligned_cols=75  Identities=59%  Similarity=0.996  Sum_probs=70.4

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCC
Q 019662            1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKD   76 (337)
Q Consensus         1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~   76 (337)
                      |..|||+||||+++|+.++||+|||+|+++||||+++.+ +++.++|++|++||++|+||.+|+.||++|++++..
T Consensus         1 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~   75 (103)
T 1bq0_A            1 AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGD-KEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQ   75 (103)
T ss_dssp             CCCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTT-CTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCS
T ss_pred             CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcc
Confidence            889999999999999999999999999999999999864 367899999999999999999999999999988764

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.90  E-value=3.5e-24  Score=160.19  Aligned_cols=74  Identities=54%  Similarity=1.049  Sum_probs=69.8

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCC
Q 019662            1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKD   76 (337)
Q Consensus         1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~   76 (337)
                      |+.|||+||||+++|+.++||+|||+|+++||||+++..  .+.+.|+.|++||++|+||.+|+.||++|++++.+
T Consensus         1 m~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~--~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~   74 (77)
T 1hdj_A            1 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEP--GAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG   74 (77)
T ss_dssp             CCCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCT--THHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred             CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--cHHHHHHHHHHHHHHHCCHHHHHHHHHHccccccc
Confidence            899999999999999999999999999999999999863  57899999999999999999999999999988764

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.88  E-value=3.1e-23  Score=156.84  Aligned_cols=74  Identities=59%  Similarity=1.046  Sum_probs=69.0

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccC
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLK   75 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~   75 (337)
                      ..|||+||||+++|+.++||+|||+|+++||||+++...+.+.++|+.|++||++|+||.+|+.||++|+.++.
T Consensus         8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~~   81 (82)
T 2ej7_A            8 MVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPSS   81 (82)
T ss_dssp             SCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSCC
T ss_pred             CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccccC
Confidence            47999999999999999999999999999999999987667899999999999999999999999999987653

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}

Probab=99.88  E-value=3.2e-23  Score=162.22  Aligned_cols=75  Identities=57%  Similarity=1.042  Sum_probs=67.8

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCC
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKD   76 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~   76 (337)
                      |.|||+||||+++|+.++||+|||+|+++||||+++.+.+.+.++|+.|++||++|+||.+|+.||++|.+++.+
T Consensus         1 M~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~   75 (99)
T 2lgw_A            1 MASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG   75 (99)
T ss_dssp             CCCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence            389999999999999999999999999999999998876678999999999999999999999999999888764

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.87  E-value=9e-23  Score=157.71  Aligned_cols=75  Identities=53%  Similarity=0.982  Sum_probs=70.1

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCC
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKD   76 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~   76 (337)
                      ..|||+||||+++|+.++||+|||+|+++||||+++.+.+.+.++|+.|++||++|+||.+|+.||++|.+++..
T Consensus         8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~   82 (92)
T 2dmx_A            8 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRA   82 (92)
T ss_dssp             CCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCC
T ss_pred             CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence            369999999999999999999999999999999998776678999999999999999999999999999887764

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.87  E-value=1.1e-22  Score=155.98  Aligned_cols=74  Identities=49%  Similarity=0.820  Sum_probs=69.1

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCC
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDM   77 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~   77 (337)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++.  +.+.++|+.|++||++|+||.+|+.||++|++++..+
T Consensus         6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~   79 (88)
T 2ctr_A            6 SGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS--PDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSG   79 (88)
T ss_dssp             CCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCS--HHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTCS
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC--hHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccccC
Confidence            4799999999999999999999999999999999985  5789999999999999999999999999999887643

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.87  E-value=9.5e-23  Score=153.08  Aligned_cols=72  Identities=50%  Similarity=0.831  Sum_probs=66.6

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhccccccc
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGL   74 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~   74 (337)
                      ..|||+||||+++|+.++||+|||+|+++||||+++.. +.+.++|+.|++||++|+||.+|+.||++|..+.
T Consensus         6 ~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~   77 (79)
T 2dn9_A            6 SGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDD-PKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGPS   77 (79)
T ss_dssp             CSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSC-TTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCCS
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcCC
Confidence            57999999999999999999999999999999999865 3688999999999999999999999999987543

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}

Probab=99.86  E-value=1.5e-22  Score=156.50  Aligned_cols=72  Identities=53%  Similarity=0.892  Sum_probs=66.9

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCC
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDM   77 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~   77 (337)
                      ..|||+||||+++|+.++||+|||+|+++||||+++.+    .++|++|++||++|+||.+|+.||++|++++..+
T Consensus         7 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~----~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~   78 (92)
T 2o37_A            7 ETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD----TEKFKEISEAFEILNDPQKREIYDQYGLEAARSG   78 (92)
T ss_dssp             CCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC----HHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHTT
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh----HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhcc
Confidence            47899999999999999999999999999999999875    4699999999999999999999999999887653

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.86  E-value=3.1e-22  Score=149.87  Aligned_cols=71  Identities=52%  Similarity=0.878  Sum_probs=66.2

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhccccccc
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGL   74 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~   74 (337)
                      ..|||+||||+++|+.++||+|||+|+++||||+++.  +.+.++|+.|++||++|+||.+|+.||++|+.+.
T Consensus         6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~   76 (78)
T 2ctp_A            6 SGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHA--PGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGPS   76 (78)
T ss_dssp             SCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSS--HHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCSC
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence            3689999999999999999999999999999999986  4688999999999999999999999999997653

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}

Probab=99.86  E-value=2.8e-22  Score=153.66  Aligned_cols=71  Identities=51%  Similarity=0.895  Sum_probs=66.0

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccc
Q 019662            1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEG   73 (337)
Q Consensus         1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~   73 (337)
                      +..|||+||||+++|+.++||+|||+|+++||||+++.  +.+.++|+.|++||++|+||.+|+.||++|+.+
T Consensus        15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~   85 (88)
T 2cug_A           15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD--PGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP   85 (88)
T ss_dssp             SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS--TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred             CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence            35799999999999999999999999999999999986  357899999999999999999999999999753

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A

Probab=99.85  E-value=8.5e-22  Score=145.63  Aligned_cols=67  Identities=60%  Similarity=1.019  Sum_probs=61.6

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhccccc
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEE   72 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~   72 (337)
                      ..|||+||||+++|+.++||+|||+|+++||||+++..    .+.|+.|++||++|+||.+|+.||++|++
T Consensus         7 ~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~----~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~   73 (73)
T 2och_A            7 ETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG----AEQFKQISQAYEVLSDEKKRQIYDQGGEE   73 (73)
T ss_dssp             CCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC----HHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH----HHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence            46899999999999999999999999999999999864    47999999999999999999999999864

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=99.85  E-value=8e-22  Score=157.04  Aligned_cols=73  Identities=56%  Similarity=0.966  Sum_probs=68.2

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccC
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLK   75 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~   75 (337)
                      ..|||+||||+++|+.++||+|||+|+++||||+++.+ +++.++|++|++||++|+||.+|+.||++|..++.
T Consensus        16 ~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~   88 (109)
T 2ctw_A           16 GESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDN-PEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY   88 (109)
T ss_dssp             SCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTC-HHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence            57999999999999999999999999999999999876 47899999999999999999999999999987654

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.85  E-value=5.2e-22  Score=158.93  Aligned_cols=73  Identities=26%  Similarity=0.578  Sum_probs=67.7

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccC
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLK   75 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~   75 (337)
                      ..|||+||||+++|+.++||+|||+|+++||||+++.+ +.+.++|+.|++||++|+||.+|+.||++|++++.
T Consensus        19 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~   91 (112)
T 2ctq_A           19 TEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPEN-PKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS   91 (112)
T ss_dssp             CCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTC-STHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence            47999999999999999999999999999999999865 36899999999999999999999999999987653

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.84  E-value=1.8e-21  Score=152.38  Aligned_cols=67  Identities=36%  Similarity=0.606  Sum_probs=63.1

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcc
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQY   69 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~   69 (337)
                      ..|||+||||+++|+.++||+|||+|+++||||+++.+ +.+.++|++|++||++|+||.+|+.||++
T Consensus        16 ~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~   82 (99)
T 2yua_A           16 RTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGS-AEAAERFTRISQAYVVLGSATLRRKYDRG   82 (99)
T ss_dssp             SSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSC-SHHHHHHHHHHHHHHHTTSHHHHHHHHHT
T ss_pred             ccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHh
Confidence            57899999999999999999999999999999999865 46889999999999999999999999984

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1

Probab=99.81  E-value=9e-21  Score=147.00  Aligned_cols=70  Identities=33%  Similarity=0.626  Sum_probs=63.8

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-----hHHHHHHHHHHHHHHhhcCChhhhhhhhcccc
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPND-----KKEAEARFKQISEAYEVLSDPQKRAIYDQYGE   71 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~-----~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~   71 (337)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++.+     .+.+.++|+.|++||++|+||.+|+.||.+..
T Consensus        15 ~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~   89 (94)
T 1wjz_A           15 KKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS   89 (94)
T ss_dssp             CSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred             CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence            46999999999999999999999999999999998742     24688999999999999999999999998754

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}

Probab=99.80  E-value=4.1e-20  Score=163.38  Aligned_cols=73  Identities=47%  Similarity=0.895  Sum_probs=68.5

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCC
Q 019662            3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKD   76 (337)
Q Consensus         3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~   76 (337)
                      +|||+||||+++|+.++||+|||+||++||||+++.+ +++.++|+.|++||++|+||.+|+.||++|+.++..
T Consensus         2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~-~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~   74 (210)
T 3apq_A            2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN-PNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED   74 (210)
T ss_dssp             CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTC-TTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCT
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-hHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccccc
Confidence            7999999999999999999999999999999999865 368899999999999999999999999999987754

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}

Probab=99.79  E-value=2.7e-20  Score=148.23  Aligned_cols=70  Identities=41%  Similarity=0.675  Sum_probs=64.7

Q ss_pred             CCCcccccCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC--ChHHHHHHHHHHHHHHhhcCChhhhhhhhcccc
Q 019662            2 GMDYYNILKVNKNA-TEDDLKKSYRKLAMKWHPDKNPN--DKKEAEARFKQISEAYEVLSDPQKRAIYDQYGE   71 (337)
Q Consensus         2 ~~~~y~iLgv~~~a-~~~~Ik~ayr~la~~~hPd~~~~--~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~   71 (337)
                      ..|||+||||+++| +.++||+|||+|+++||||+++.  ..+.+.++|++|++||++|+||.+|+.||+++.
T Consensus        14 ~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~   86 (109)
T 2qsa_A           14 LENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD   86 (109)
T ss_dssp             TSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred             CCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence            47999999999999 99999999999999999999975  234688999999999999999999999999885

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}

Probab=99.76  E-value=3.6e-19  Score=150.54  Aligned_cols=70  Identities=33%  Similarity=0.610  Sum_probs=63.7

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-----HHHHHHHHHHHHHHhhcCChhhhhhhhcccc
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDK-----KEAEARFKQISEAYEVLSDPQKRAIYDQYGE   71 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~-----~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~   71 (337)
                      ++|||+||||+++|+.++||+|||+|+++||||+++.+.     +.|.++|+.|++||++|+||.+|+.||.++.
T Consensus         9 ~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~   83 (155)
T 2l6l_A            9 KKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC   83 (155)
T ss_dssp             CSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred             CCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence            479999999999999999999999999999999987652     2478999999999999999999999998654

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.76  E-value=2.4e-19  Score=137.72  Aligned_cols=62  Identities=34%  Similarity=0.490  Sum_probs=57.5

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhh
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAI   65 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~   65 (337)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++..  .+.++|++|++||++|+|+.+|+.
T Consensus        26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~--~~~~~f~~i~~Ay~~L~d~~~R~~   87 (90)
T 2ys8_A           26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAP--GSEDAFKAVVNARTALLKNIKSGP   87 (90)
T ss_dssp             CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCT--THHHHHHHHHHHHHHHHHHHCCSC
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc--cHHHHHHHHHHHHHHHCCcccccC
Confidence            47999999999999999999999999999999999863  578999999999999999998863

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1

Probab=99.74  E-value=7e-19  Score=131.73  Aligned_cols=65  Identities=15%  Similarity=0.335  Sum_probs=58.8

Q ss_pred             CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccc
Q 019662            3 MDYYNILKVNKN--ATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEG   73 (337)
Q Consensus         3 ~~~y~iLgv~~~--a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~   73 (337)
                      .++|+||||+++  |+.++||+|||+||++||||++++     .++|++|++||++|+|+.+|.. |.||..+
T Consensus        11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~-----~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~   77 (79)
T 1faf_A           11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS-----HALMQELNSLWGTFKTEVYNLR-MNLGGTG   77 (79)
T ss_dssp             HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC-----HHHHHHHHHHHHHHHHHHHHHT-TCCSSCC
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-----HHHHHHHHHHHHHHhhHHHHHH-HhcCCcc
Confidence            368999999999  999999999999999999999864     4799999999999999999988 5677654

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.74  E-value=3.8e-19  Score=135.72  Aligned_cols=61  Identities=28%  Similarity=0.469  Sum_probs=57.5

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhh
Q 019662            3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR   63 (337)
Q Consensus         3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r   63 (337)
                      .++|+||||+++|+.+|||+|||+||++||||+|+.+.+.+.++|++|++||++|+|...|
T Consensus        16 ~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r   76 (88)
T 1iur_A           16 KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL   76 (88)
T ss_dssp             HHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence            5799999999999999999999999999999999987667899999999999999998777

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1

Probab=99.73  E-value=1.4e-19  Score=144.59  Aligned_cols=65  Identities=25%  Similarity=0.451  Sum_probs=60.8

Q ss_pred             CCcccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhccccc
Q 019662            3 MDYYNILKVNKNATE--DDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEE   72 (337)
Q Consensus         3 ~~~y~iLgv~~~a~~--~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~   72 (337)
                      .+||+||||+++|+.  ++||+|||+||++||||+++.     .++|++|++||++|+||.+|+.||.+|..
T Consensus         8 ~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~-----~e~f~~I~~AYevL~d~~~R~~~~~~~~~   74 (114)
T 1gh6_A            8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-----EEKMKKMNTLYKKMEDGVKYAHQPDFGGF   74 (114)
T ss_dssp             HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT-----TTTTHHHHHHHHHHHHHHHSCCSSCCSCC
T ss_pred             hhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc-----HHHHHHHHHHHHHHCCHHHHHHhhhcccc
Confidence            589999999999999  999999999999999999986     37999999999999999999999998853

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C

Probab=99.73  E-value=3.6e-19  Score=151.87  Aligned_cols=64  Identities=25%  Similarity=0.468  Sum_probs=57.7

Q ss_pred             CCcccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccc
Q 019662            3 MDYYNILKVNKNAT--EDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGE   71 (337)
Q Consensus         3 ~~~y~iLgv~~~a~--~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~   71 (337)
                      .|||+||||+++|+  .+|||+|||+||+++|||++++     +++|++|++||++|+||.+|+.||+||.
T Consensus        11 ~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~-----~e~F~~I~~AYevLsdp~kR~~YD~~G~   76 (174)
T 2pf4_E           11 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-----EEKMKKMNTLYKKMEDGVKYAHQPDFGG   76 (174)
T ss_dssp             HHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C-----CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred             ccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC-----HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence            58999999999998  6999999999999999999976     3689999999999999999999999996

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1

Probab=99.70  E-value=4.6e-18  Score=145.73  Aligned_cols=68  Identities=25%  Similarity=0.403  Sum_probs=61.7

Q ss_pred             CCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCh----HHHHHHHHHHHHHHhhcCChhhhhhhhccc
Q 019662            3 MDYYNILKVNKNA--TEDDLKKSYRKLAMKWHPDKNPNDK----KEAEARFKQISEAYEVLSDPQKRAIYDQYG   70 (337)
Q Consensus         3 ~~~y~iLgv~~~a--~~~~Ik~ayr~la~~~hPd~~~~~~----~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G   70 (337)
                      +|||++|||++++  +.++||+|||+|+++||||+++...    ..|.++|+.|++||++|+||.+|+.||...
T Consensus         1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l   74 (171)
T 1fpo_A            1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL   74 (171)
T ss_dssp             CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred             CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence            3899999999999  9999999999999999999998653    246789999999999999999999999853

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}

Probab=99.68  E-value=1.9e-17  Score=145.96  Aligned_cols=67  Identities=24%  Similarity=0.446  Sum_probs=60.3

Q ss_pred             CCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCh----HHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662            2 GMDYYNILKVNKN--ATEDDLKKSYRKLAMKWHPDKNPNDK----KEAEARFKQISEAYEVLSDPQKRAIYDQ   68 (337)
Q Consensus         2 ~~~~y~iLgv~~~--a~~~~Ik~ayr~la~~~hPd~~~~~~----~~~~~~f~~i~~Ay~~L~d~~~r~~yD~   68 (337)
                      ..|||+||||+++  ++.++||+|||+|+++||||+++...    ..|.++|+.|++||++|+||.+|+.||.
T Consensus        42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~  114 (207)
T 3bvo_A           42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL  114 (207)
T ss_dssp             TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred             CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence            4699999999986  79999999999999999999997642    2467899999999999999999999995

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J

Probab=99.68  E-value=7.5e-18  Score=144.59  Aligned_cols=64  Identities=22%  Similarity=0.408  Sum_probs=59.1

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChH--HHHHHHHHHHHHHhhcCChhhhhhh
Q 019662            3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKK--EAEARFKQISEAYEVLSDPQKRAIY   66 (337)
Q Consensus         3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~--~~~~~f~~i~~Ay~~L~d~~~r~~y   66 (337)
                      .|||++|||+++|+.++||+|||+||++||||+++....  .|.++|+.|++||++|+|+.+|+.|
T Consensus       117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y  182 (182)
T 1n4c_A          117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY  182 (182)
T ss_dssp             CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence            589999999999999999999999999999999976532  3889999999999999999999987

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A

Probab=99.68  E-value=7.1e-18  Score=129.14  Aligned_cols=57  Identities=21%  Similarity=0.352  Sum_probs=51.8

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh--HHHHHHHHHHHHHHhhcCC
Q 019662            3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDK--KEAEARFKQISEAYEVLSD   59 (337)
Q Consensus         3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~--~~~~~~f~~i~~Ay~~L~d   59 (337)
                      .++|++|||+++|+.+|||+|||+||++||||+|+++.  ..|+++|+.|++||++|.+
T Consensus        33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~   91 (92)
T 2qwo_B           33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN   91 (92)
T ss_dssp             CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence            48999999999999999999999999999999998653  2488999999999999974

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}

Probab=99.66  E-value=2e-17  Score=130.53  Aligned_cols=59  Identities=24%  Similarity=0.393  Sum_probs=52.1

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------hHHHHHHHHHHHHHHhhcCChh
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPND------KKEAEARFKQISEAYEVLSDPQ   61 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~------~~~~~~~f~~i~~Ay~~L~d~~   61 (337)
                      +.|||+||+++. |+.++||+|||+||++||||+|+..      ...|+++|+.|++||++|+|+.
T Consensus        40 ~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~  104 (106)
T 3ag7_A           40 GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG  104 (106)
T ss_dssp             TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence            469999999996 9999999999999999999998631      1247899999999999999975

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A

Probab=99.63  E-value=5.6e-17  Score=140.04  Aligned_cols=65  Identities=26%  Similarity=0.505  Sum_probs=59.1

Q ss_pred             CCCccccc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhccc
Q 019662            2 GMDYYNIL------KVNK-NATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYG   70 (337)
Q Consensus         2 ~~~~y~iL------gv~~-~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G   70 (337)
                      ..|||+||      |+++ +|+.++||+|||+|+++||||+++.    +.++|+.|++||++|+||.+|+.||...
T Consensus        10 ~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~----a~~~f~~i~~AY~vL~dp~~R~~Yd~~l   81 (181)
T 3uo3_A           10 TSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ----GSEQSSTLNQAYHTLKDPLRRSQYMLKL   81 (181)
T ss_dssp             SCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS----CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred             CCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc----HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence            47999999      4665 9999999999999999999999985    5689999999999999999999999843

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}

Probab=99.63  E-value=2.5e-17  Score=172.12  Aligned_cols=76  Identities=45%  Similarity=0.845  Sum_probs=40.9

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCC
Q 019662            1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDM   77 (337)
Q Consensus         1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~   77 (337)
                      ++.|||++|||+++|+.+|||+|||+||++||||+++.+ +.+.++|++|++||++|+||.+|+.||+||++++...
T Consensus        19 ~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~-~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~   94 (780)
T 3apo_A           19 HDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN-PNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN   94 (780)
T ss_dssp             ----CHHHHTCCTTCCHHHHHHHHCC------------------------CTHHHHHHSHHHHHHHTTC--------
T ss_pred             CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-hHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccC
Confidence            357999999999999999999999999999999999765 4688999999999999999999999999999887653

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=99.62  E-value=1.1e-16  Score=117.32  Aligned_cols=56  Identities=27%  Similarity=0.345  Sum_probs=50.7

Q ss_pred             CCcccccCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhh
Q 019662            3 MDYYNILKVNK-NATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR   63 (337)
Q Consensus         3 ~~~y~iLgv~~-~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r   63 (337)
                      .++|+||||++ +|+.++||+|||+|+++||||++.+     .++|++|++||++|+++..|
T Consensus        14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~-----~~~f~~i~~Aye~L~~~~~r   70 (71)
T 2guz_A           14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS-----PFLATKINEAKDFLEKRGIS   70 (71)
T ss_dssp             HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCC-----HHHHHHHHHHHHHHHHHCCC
T ss_pred             HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-----HHHHHHHHHHHHHHhhhhhc
Confidence            47999999999 7999999999999999999999753     36999999999999988655

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}

Probab=99.40  E-value=1.1e-13  Score=109.74  Aligned_cols=82  Identities=20%  Similarity=0.180  Sum_probs=71.3

Q ss_pred             CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEEE
Q 019662          157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVI  236 (337)
Q Consensus       157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i  236 (337)
                      |.+.|++++++|||.||++|+++.|++.      +|       .++|+||+|+++|++++++|+|++..+ .+|||||+|
T Consensus         9 R~G~DL~~~~~Isl~eAl~G~~i~v~tl------dG-------~~~v~ip~g~~~G~~~rl~G~G~p~~~-~~GDL~v~~   74 (109)
T 3i38_A            9 IVGHNLEIVLPLAPWEAALGAKVTVPTL------KE-------SILLTVPPGSQAGQRLRIKGKGLVSKT-HTGDLFAVI   74 (109)
T ss_dssp             EETTEEEEEEEECHHHHHHCEEEEECCS------SS-------CEEEEECTTCCTTCEEEETTCSCBCSS-CBCCEEEEE
T ss_pred             EECCEEEEEEEcCHHHHhCCCEEEEEcC------CC-------CEEEeeCCCcCcCeEEEECCccCCCCC-CCcCEEEEE
Confidence            5788999999999999999999888775      66       578999999999999999999999744 789999999


Q ss_pred             EeeCCCccccCCCceE
Q 019662          237 DEKPHDVYKRDSNDLI  252 (337)
Q Consensus       237 ~v~~~~~f~r~g~dL~  252 (337)
                      +|.-+..++.+..+++
T Consensus        75 ~V~~P~~Ls~~q~~~l   90 (109)
T 3i38_A           75 KIVMPTKPDEKARELW   90 (109)
T ss_dssp             EECCCSSCCHHHHHHH
T ss_pred             EEECCCCCCHHHHHHH
Confidence            9998887776554443

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}

Probab=99.34  E-value=6.1e-13  Score=107.45  Aligned_cols=83  Identities=16%  Similarity=0.192  Sum_probs=69.1

Q ss_pred             CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCC--CcCCCEEEECCCCCCCCCC-CCccEE
Q 019662          157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPG--WKKGTKITFPDKGNEQPNQ-LPADLV  233 (337)
Q Consensus       157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G--~~~G~~i~l~g~G~~~~~~-~~GDL~  233 (337)
                      |+|.|++++++|||.+|++|+++.|++.      +|      +.++|+||||  +++|++++++|+|++..++ .+||||
T Consensus         4 R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG------~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~   71 (121)
T 1xao_A            4 RDGDDLVYEAEIDLLTAIAGGEFALEHV------SG------DWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLI   71 (121)
T ss_dssp             EETTEEEEEEEEEHHHHHHCEEEEEECT------TS------CEEEEEECTTSCCCTTCEEEETTCSCC------CCCEE
T ss_pred             EECCeEEEEEEcCHHHHhCCCEEEEecC------CC------CEEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEE
Confidence            5688999999999999999999888876      77      4689999999  9999999999999996443 689999


Q ss_pred             EEEEeeCCCc--cccCCCce
Q 019662          234 FVIDEKPHDV--YKRDSNDL  251 (337)
Q Consensus       234 v~i~v~~~~~--f~r~g~dL  251 (337)
                      |+++|..+..  ++.+..++
T Consensus        72 V~~~V~~P~~~~ls~~q~~~   91 (121)
T 1xao_A           72 IKFTIKFPENHFTSEENLKK   91 (121)
T ss_dssp             EEEEEECCCTTCSCHHHHHH
T ss_pred             EEEEEECCCCCCCCHHHHHH
Confidence            9999998876  66655444

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A

Probab=99.11  E-value=3.9e-11  Score=103.56  Aligned_cols=83  Identities=19%  Similarity=0.235  Sum_probs=71.4

Q ss_pred             CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC--CCCccEE
Q 019662          156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN--QLPADLV  233 (337)
Q Consensus       156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~--~~~GDL~  233 (337)
                      .|.+.|++++++|||.+|++|+++.|++.      +|      +.++|.||+|+++|++++++|+|++..+  +.+||||
T Consensus        89 ~R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG------~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~  156 (181)
T 3agx_A           89 KRDGSDVIYPARISLREALCGCTVNVPTL------DG------RTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLI  156 (181)
T ss_dssp             EEETTEEEEEEEEEHHHHHHCEEEEEECT------TS------CEEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEE
T ss_pred             eeeCCcEEEEEEcCHHHHhCCCEEEeECC------CC------CEEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEE
Confidence            46789999999999999999999888876      77      3688999999999999999999999643  4579999


Q ss_pred             EEEEeeCCCccccCCCc
Q 019662          234 FVIDEKPHDVYKRDSND  250 (337)
Q Consensus       234 v~i~v~~~~~f~r~g~d  250 (337)
                      |+++|.-+..++.+..+
T Consensus       157 V~~~V~~P~~ls~~q~~  173 (181)
T 3agx_A          157 IEFEVIFPERIPQTSRT  173 (181)
T ss_dssp             EEEEEECCSCCCHHHHH
T ss_pred             EEEEEECCCCCCHHHHH
Confidence            99999988776655443

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A

Probab=99.11  E-value=3.6e-11  Score=102.75  Aligned_cols=83  Identities=16%  Similarity=0.228  Sum_probs=71.3

Q ss_pred             CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC--CCCccEE
Q 019662          156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN--QLPADLV  233 (337)
Q Consensus       156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~--~~~GDL~  233 (337)
                      .|.+.|++++++|||.+|++|+++.|+..      +|      +.++|.||+|+++|++++++|+|++..+  +.+||||
T Consensus        83 ~R~G~DL~~~~~Isl~eAllG~~~~v~tl------dG------~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~  150 (170)
T 1c3g_A           83 KRDGDDLIYTLPLSFKESLLGFSKTIQTI------DG------RTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLI  150 (170)
T ss_dssp             EEETTEEEEEECCBHHHHHHCEEEEEECS------SS------CEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEE
T ss_pred             EEeCCcEeEEEEcCHHHHhCCCeEEeeCC------CC------CEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEE
Confidence            36789999999999999999999988876      77      3688999999999999999999998643  3579999


Q ss_pred             EEEEeeCCCccccCCCc
Q 019662          234 FVIDEKPHDVYKRDSND  250 (337)
Q Consensus       234 v~i~v~~~~~f~r~g~d  250 (337)
                      |+++|.-+..++.+...
T Consensus       151 V~~~V~~P~~Ls~~q~~  167 (170)
T 1c3g_A          151 VKYKVDYPISLNDAQKR  167 (170)
T ss_dssp             EEECCBCCSSCCTTHHH
T ss_pred             EEEEEECCCCCCHHHHH
Confidence            99999988877655443

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}

Probab=99.09  E-value=5.7e-11  Score=102.48  Aligned_cols=83  Identities=18%  Similarity=0.160  Sum_probs=71.2

Q ss_pred             CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC--CCCccEE
Q 019662          156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN--QLPADLV  233 (337)
Q Consensus       156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~--~~~GDL~  233 (337)
                      .|.+.|++++++|||.||++|+++.|++.      +|      +.++|.||+|+++|++++++|+|++..+  +.+||||
T Consensus        89 ~R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG------~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~  156 (180)
T 2q2g_A           89 TRDDCHLIMKVTIPLVRALTGFTCPVTTL------DN------RNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLI  156 (180)
T ss_dssp             EEETTEEEEEEEEEHHHHHHCEEEEEECT------TC------CEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEE
T ss_pred             EEcCCEEEEEEEcCHHHHhCCCEEEeeCC------CC------CEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEE
Confidence            46789999999999999999999888876      77      3688999999999999999999998643  4579999


Q ss_pred             EEEEeeCCCccccCCCc
Q 019662          234 FVIDEKPHDVYKRDSND  250 (337)
Q Consensus       234 v~i~v~~~~~f~r~g~d  250 (337)
                      |+++|.-+..++.+..+
T Consensus       157 V~~~V~~P~~Ls~~q~~  173 (180)
T 2q2g_A          157 LEFDICFPKSLTPEQKK  173 (180)
T ss_dssp             EEEEEECCSCCCHHHHH
T ss_pred             EEEEEECCCCCCHHHHH
Confidence            99999988776655433

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A

Probab=99.07  E-value=6.9e-11  Score=113.00  Aligned_cols=66  Identities=50%  Similarity=0.888  Sum_probs=57.0

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh--HHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662            3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDK--KEAEARFKQISEAYEVLSDPQKRAIYDQ   68 (337)
Q Consensus         3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~--~~~~~~f~~i~~Ay~~L~d~~~r~~yD~   68 (337)
                      .++|.+||+.+.++.++|+++|+++++++|||+.+.+.  +.++++|+.|++||++|+|+.+|..||+
T Consensus       382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~  449 (450)
T 2y4t_A          382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD  449 (450)
T ss_dssp             CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred             hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence            58999999999999999999999999999999998643  4688999999999999999999999996

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=99.06  E-value=1.1e-10  Score=105.78  Aligned_cols=85  Identities=15%  Similarity=0.209  Sum_probs=67.2

Q ss_pred             CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCC--CcCCCEEEECCCCCCCCCC-CCccE
Q 019662          156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPG--WKKGTKITFPDKGNEQPNQ-LPADL  232 (337)
Q Consensus       156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G--~~~G~~i~l~g~G~~~~~~-~~GDL  232 (337)
                      .|.+.||+++++|||.||++|+++.|++.      +|      +.++|+||||  +++|++++|+|+|++..+. .+|||
T Consensus       158 ~R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG------~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL  225 (248)
T 1nlt_A          158 KRDGDDLVYEAEIDLLTAIAGGEFALEHV------SG------DWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNL  225 (248)
T ss_dssp             EEETTEEEEEEEEEHHHHHHCBCCEEECS------SS------CEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCE
T ss_pred             eeeCCEEEEEEEeCHHHHhcCCEEEEeCC------CC------CEEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCE
Confidence            46789999999999999999999999877      77      4689999999  9999999999999986433 57999


Q ss_pred             EEEEEeeCCCc--cccCCCceE
Q 019662          233 VFVIDEKPHDV--YKRDSNDLI  252 (337)
Q Consensus       233 ~v~i~v~~~~~--f~r~g~dL~  252 (337)
                      ||+|+|.-+..  ++.+..+|+
T Consensus       226 ~V~~~V~~P~~~~Ls~~q~~~l  247 (248)
T 1nlt_A          226 IIKFTIKDPENHFTSEENLKKL  247 (248)
T ss_dssp             EEEEEEECCC------------
T ss_pred             EEEEEEECCCCCCCCHHHHHhh
Confidence            99999998877  776665553

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=98.97  E-value=2.1e-10  Score=107.86  Aligned_cols=83  Identities=19%  Similarity=0.173  Sum_probs=72.0

Q ss_pred             CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEE
Q 019662          156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFV  235 (337)
Q Consensus       156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~  235 (337)
                      .|.+.||+++++|+|.||++|+++.|++.      +|       .++|+||+|+++|++++|+|+|++.. ..+|||||+
T Consensus       228 ~R~G~DL~~~~~Isl~eAllG~~v~VptL------dG-------~v~l~ip~gt~~g~~~rl~G~GmP~~-~~rGDL~v~  293 (329)
T 3lz8_A          228 DIVGHNLEIVLPLAPWEAALGAKVTVPTL------KE-------SILLTVPPGSQAGQRLRIKGKGLVSK-THTGDLFAV  293 (329)
T ss_dssp             EEETTEEEEEEEECHHHHHHCEEEEECCS------SS-------CEEEEECTTCCTTCEEEETTCSCBCS-SCBCCEEEE
T ss_pred             EEcCCcEEEEEECCHHHHcCCCeEEEECC------CC-------CEEEEECCCCCCCCEEEEcCCCCCCC-CCCCCEEEE
Confidence            36789999999999999999999988887      77       36899999999999999999999865 468999999


Q ss_pred             EEeeCCCccccCCCceE
Q 019662          236 IDEKPHDVYKRDSNDLI  252 (337)
Q Consensus       236 i~v~~~~~f~r~g~dL~  252 (337)
                      |+|.-++.++.+...|+
T Consensus       294 ~~V~~P~~l~~~q~~~l  310 (329)
T 3lz8_A          294 IKIVMPTKPDEKARELW  310 (329)
T ss_dssp             EEECCCSSCCHHHHHHH
T ss_pred             EEEECCCCCCHHHHHHH
Confidence            99998887765555443

>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=98.81  E-value=3.4e-09  Score=75.47  Aligned_cols=51  Identities=16%  Similarity=0.104  Sum_probs=45.0

Q ss_pred             cccccCCCCC---CCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCh
Q 019662            5 YYNILKVNKN---ATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP   60 (337)
Q Consensus         5 ~y~iLgv~~~---a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~   60 (337)
                      -|.||||+++   ++.++|++|||+|...+|||+..+     .....+|++|++.|...
T Consensus         6 A~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS-----~yl~~ki~~Ake~l~~~   59 (65)
T 2guz_B            6 SCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGS-----FYLQSKVYRAAERLKWE   59 (65)
T ss_dssp             HHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCC-----HHHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHHHHH
Confidence            4789999999   999999999999999999999754     46778999999998643

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=89.56  E-value=0.025  Score=43.50  Aligned_cols=30  Identities=7%  Similarity=0.120  Sum_probs=25.5

Q ss_pred             CCCeeeeeeechhhheeCceEEEEEEEEEE
Q 019662          159 PPPVESKLPCSLEELYSGSTRKMKISRTVV  188 (337)
Q Consensus       159 ~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~  188 (337)
                      +.++.+.|.|||+|||+|.+++|.+.+.+.
T Consensus         1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~   30 (104)
T 2ctt_A            1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDT   30 (104)
T ss_dssp             CCCCCCCCCCCCSSCCSSSCTTCCSSCCEE
T ss_pred             CCceEEEEEEEHHHHcCCCEEEEEeeeeeE
Confidence            357888999999999999999988877654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	337
d1xbla_	75	a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain	2e-25
d1hdja_	77	a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9	2e-24
d1c3ga2	90	b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Ba	5e-24
d1iura_	88	a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human	2e-22
d1wjza_	94	a.2.3.1 (A:) CSL-type zinc finger-containing prote	8e-22
d1nz6a_	98	a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T	3e-21
d1fpoa1	76	a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) doma	1e-20
d1gh6a_	114	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	5e-20
d1c3ga1	80	b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Ba	5e-19
d1fafa_	79	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	1e-17
d1nlta2	80	b.4.1.1 (A:258-337) Mitochondrial protein import p	2e-17
d1nlta1	74	b.4.1.1 (A:110-138,A:213-257) Mitochondrial protei	1e-14

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 75

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 95.1 bits (236), Expect = 2e-25
 Identities = 42/72 (58%), Positives = 56/72 (77%), Gaps = 1/72 (1%)

Query: 4  DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
          DYY IL V+K A E +++K+Y++LAMK+HPD+N  DK+  EA+FK+I EAYEVL+D QKR
Sbjct: 4  DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEA-EAKFKEIKEAYEVLTDSQKR 62

Query: 64 AIYDQYGEEGLK 75
          A YDQYG    +
Sbjct: 63 AAYDQYGHAAFE 74

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Length = 77

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.5 bits (229), Expect = 2e-24
 Identities = 40/77 (51%), Positives = 60/77 (77%), Gaps = 2/77 (2%)

Query: 1  MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
          MG DYY  L + + A+++++K++YR+ A+++HPDKN      AE +FK+I+EAY+VLSDP
Sbjct: 1  MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPG--AEEKFKEIAEAYDVLSDP 58

Query: 61 QKRAIYDQYGEEGLKDM 77
          +KR I+D+YGEEGLK  
Sbjct: 59 RKREIFDRYGEEGLKGS 75

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 90

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 91.9 bits (228), Expect = 5e-24
 Identities = 31/88 (35%), Positives = 50/88 (56%)

Query: 244 YKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAR 303
           +KRD +DLI    +S  E+L G S ++ T+DGR L ++    + P      PG+GMP  +
Sbjct: 2   FKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPK 61

Query: 304 EPGNRGDLRIKFEVKFPTKLTPEQRAGL 331
            P  RG+L +K++V +P  L   Q+  +
Sbjct: 62  NPSQRGNLIVKYKVDYPISLNDAQKRAI 89

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Length = 88

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.8 bits (217), Expect = 2e-22
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 4  DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63
          +  ++++      E + KK  R+L +KWHPDKNP +   A   FK +      L    K+
Sbjct: 17 EVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLE---KQ 73

Query: 64 AIYDQYGEEGLK 75
          A  DQ  +   +
Sbjct: 74 AFLDQNADRASR 85

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Length = 94

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 86.3 bits (213), Expect = 8e-22
 Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 5/75 (6%)

Query: 1  MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPND-----KKEAEARFKQISEAYE 55
          +  D+Y+IL  + +A   DLK+ Y+KL + +HPDK   D      +E   +F +I +A++
Sbjct: 14 LKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWK 73

Query: 56 VLSDPQKRAIYDQYG 70
          +L + + +  YD   
Sbjct: 74 ILGNEETKKKYDLQR 88

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 84.6 bits (209), Expect = 3e-21
 Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 2/67 (2%)

Query: 2  GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPND--KKEAEARFKQISEAYEVLSD 59
          G   +  + +    T + +KK YRK  +  HPDK      ++ A+  F ++++A+    +
Sbjct: 32 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFEN 91

Query: 60 PQKRAIY 66
            ++ +Y
Sbjct: 92 QGQKPLY 98

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 76

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 82.4 bits (203), Expect = 1e-20
 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 6/71 (8%)

Query: 3  MDYYNILKVNKNATED--DLKKSYRKLAMKWHPDKNPN----DKKEAEARFKQISEAYEV 56
          MDY+ +  +      D   L   ++ L  ++HPDK  +    ++  A  +   I++A++ 
Sbjct: 1  MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQT 60

Query: 57 LSDPQKRAIYD 67
          L  P  RA Y 
Sbjct: 61 LRHPLMRAEYL 71

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Length = 114

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

 Score = 82.2 bits (202), Expect = 5e-20
 Identities = 23/116 (19%), Positives = 50/116 (43%), Gaps = 17/116 (14%)

Query: 3   MDYYNILKVNKNA--TEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
           +   ++L + ++A      ++K+Y K   ++HPDK  +++     + K+++  Y+ + D 
Sbjct: 8   LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEE-----KMKKMNTLYKKMEDG 62

Query: 61  QKRAIYDQYGEEGLKDMPPSSSSGYSYANGSGGNSKGFNPRNAEDIFA--EFFGSS 114
            K A    +G        P+         G+    + +N  N E++F   E   S 
Sbjct: 63  VKYAHQPDFGGFWDATEIPTY--------GTDEWEQWWNAFNEENLFCSEEMPSSD 110

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 78.0 bits (192), Expect = 5e-19
 Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 5/82 (6%)

Query: 161 PVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDK 220
            V+  LP SLE+L+ G  +  KI R           E   + I +KPGWK GTKIT+ ++
Sbjct: 2   TVQVNLPVSLEDLFVGKKKSFKIGRKGPHGAS----EKTQIDIQLKPGWKAGTKITYKNQ 57

Query: 221 GNEQPN-QLPADLVFVIDEKPH 241
           G+  P       L FVI EK H
Sbjct: 58  GDYNPQTGRRKTLQFVIQEKSH 79

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Length = 79

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

 Score = 74.3 bits (182), Expect = 1e-17
 Identities = 8/70 (11%), Positives = 26/70 (37%), Gaps = 7/70 (10%)

Query: 3  MDYYNILKVNKNA--TEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60
               +LK+ +        ++++Y++ ++  HPDK  +         ++++  +      
Sbjct: 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHA-----LMQELNSLWGTFKTE 65

Query: 61 QKRAIYDQYG 70
                +  G
Sbjct: 66 VYNLRMNLGG 75

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 73.8 bits (181), Expect = 2e-17
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 3/79 (3%)

Query: 244 YKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDL--NIAVTDIISPGFELGIPGEGMPI 301
           +KRD +DL+   ++ L  A+ G   +L  + G  L   I   ++I+PG    I G+GMPI
Sbjct: 2   FKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPI 61

Query: 302 AREPGNRGDLRIKFEVKFP 320
            +  G  G+L IKF +K P
Sbjct: 62  PKYGG-YGNLIIKFTIKDP 79

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 74

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 65.9 bits (160), Expect = 1e-14
 Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 13/86 (15%)

Query: 156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKI 215
           P++   ++ ++  SLEELY G T K+ ++R             +IL + V+PG K G +I
Sbjct: 1   PQRGKDIKHEISASLEELYKGRTAKLALNR-------------KILEVHVEPGMKDGQRI 47

Query: 216 TFPDKGNEQPNQLPADLVFVIDEKPH 241
            F  + ++ P+ +P D+VF++ E+PH
Sbjct: 48  VFKGEADQAPDVIPGDVVFIVSERPH 73

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	337
d1c3ga2	90	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.93
d1xbla_	75	DnaJ chaperone, N-terminal (J) domain {Escherichia	99.92
d1hdja_	77	HSP40 {Human (Homo sapiens) [TaxId: 9606]}	99.91
d1nlta2	80	Mitochondrial protein import protein mas5 (Hsp40,	99.86
d1wjza_	94	CSL-type zinc finger-containing protein 3 (J-domai	99.85
d1gh6a_	114	Large T antigen, the N-terminal J domain {Simian v	99.82
d1nlta1	74	Mitochondrial protein import protein mas5 (Hsp40,	99.77
d1c3ga1	80	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.77
d1iura_	88	Hypothetical protein KIAA0730 {Human (Homo sapiens	99.74
d1fpoa1	76	HSC20 (HSCB), N-terminal (J) domain {Escherichia c	99.73
d1fafa_	79	Large T antigen, the N-terminal J domain {Murine p	99.72
d1nz6a_	98	Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}	99.66
d1nlta1	74	Mitochondrial protein import protein mas5 (Hsp40,	99.44
d1c3ga2	90	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.33
d1nlta2	80	Mitochondrial protein import protein mas5 (Hsp40,	99.19
d1c3ga1	80	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	98.92

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=1.3e-26  Score=176.53  Aligned_cols=90  Identities=34%  Similarity=0.655  Sum_probs=85.8

Q ss_pred             ccccCCCceEEEEeeCHHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCC
Q 019662          243 VYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTK  322 (337)
Q Consensus       243 ~f~r~g~dL~~~~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~  322 (337)
                      .|+|+|+||+++++||+.||++|+++.|+|+||+.+.|++|+++++|++++|+|+|||...+++.+|||||+|+|.+|++
T Consensus         1 ~F~R~G~DL~~~~~I~~~eal~G~~~~i~~~dG~~i~i~ip~~~~~g~~~~i~g~G~p~~~~~~~rGdL~V~~~v~~P~~   80 (90)
T d1c3ga2           1 NFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPIS   80 (90)
T ss_dssp             SEEEETTEEEEEECCBHHHHHHCEEEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSS
T ss_pred             CCeEeCCeEEEEEEeCHHHHhcCCeEEEecccccceecccccccccccccccCCCCCCcCCCCCCcCCEEEEEEEEcCCC
Confidence            49999999999999999999999999999999999999999999999999999999998766678999999999999999


Q ss_pred             CCHHHHHHHH
Q 019662          323 LTPEQRAGLK  332 (337)
Q Consensus       323 l~~~~~~~l~  332 (337)
                      ||++|+++|+
T Consensus        81 ls~~qk~~lE   90 (90)
T d1c3ga2          81 LNDAQKRAID   90 (90)
T ss_dssp             CCTTHHHHTC
T ss_pred             CCHHHHHhhC
Confidence            9999999874

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=1.4e-25  Score=164.76  Aligned_cols=73  Identities=60%  Similarity=1.023  Sum_probs=68.1

Q ss_pred             CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccC
Q 019662            2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLK   75 (337)
Q Consensus         2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~   75 (337)
                      .+|||+||||+++||.+|||+|||+|+++||||+++.+ +.+.++|..|++||+||+||.+|+.||+||+.++.
T Consensus         2 k~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~-~~~~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~e   74 (75)
T d1xbla_           2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGD-KEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFE   74 (75)
T ss_dssp             CCCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTT-CHHHHHHHHHHHHHHHTTSSHHHHHHHHHTTSSCC
T ss_pred             CCCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCC-hHHHHHHHHHHHHHHhcCCHHHHHHHHHhCccccC
Confidence            47999999999999999999999999999999999875 46788999999999999999999999999987764

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.6e-25  Score=165.47  Aligned_cols=74  Identities=54%  Similarity=1.049  Sum_probs=70.1

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCC
Q 019662            1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKD   76 (337)
Q Consensus         1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~   76 (337)
                      |++|||+||||+++||.++|++||++|++++|||+++.+  .+.++|+.|++||+||+||.+|+.||+||++++++
T Consensus         1 m~kdyY~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~~~--~~~~~~~~i~~Ay~vLsdp~~R~~YD~~g~~~~~g   74 (77)
T d1hdja_           1 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEP--GAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG   74 (77)
T ss_dssp             CCCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCT--THHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred             CCCChHHHcCCCCCcCHHHHHHHHHHHHHHhccccccch--hHHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcC
Confidence            999999999999999999999999999999999999874  57889999999999999999999999999998864

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.86  E-value=4.5e-22  Score=147.91  Aligned_cols=78  Identities=36%  Similarity=0.639  Sum_probs=72.8

Q ss_pred             ccccCCCceEEEEeeCHHHHhCCcEEEEecCCCcEEEEEcCCC--CCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECC
Q 019662          243 VYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDI--ISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFP  320 (337)
Q Consensus       243 ~f~r~g~dL~~~~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~--~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P  320 (337)
                      .|+|+|+||+++++||++||++|++++|+|+||+.++++|++.  +++|+++||+|+|||..+ .+.+|||||+|+|.+|
T Consensus         1 tF~R~G~dL~~~~~I~~~eal~G~~~~i~~~dg~~~~i~i~~~~~~~~g~~~~i~g~G~p~~~-~~~~GDL~v~~~V~~P   79 (80)
T d1nlta2           1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPK-YGGYGNLIIKFTIKDP   79 (80)
T ss_dssp             SCEEETTEEEEEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSS-SCSBCCEEEEEEEECC
T ss_pred             CcEEeCCEEEEEEEeCHHHHhCCCEEEEEecCcceEEEEeCCCCCcCCCCEEEecCCCCCCCC-cCCcCcEEEEEEEEcC
Confidence            4999999999999999999999999999999999888888655  999999999999999987 4679999999999999


Q ss_pred             C
Q 019662          321 T  321 (337)
Q Consensus       321 ~  321 (337)
                      +
T Consensus        80 k   80 (80)
T d1nlta2          80 E   80 (80)
T ss_dssp             C
T ss_pred             C
Confidence            6

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=2e-22  Score=154.06  Aligned_cols=70  Identities=33%  Similarity=0.638  Sum_probs=64.1

Q ss_pred             CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-----hHHHHHHHHHHHHHHhhcCChhhhhhhhccc
Q 019662            1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPND-----KKEAEARFKQISEAYEVLSDPQKRAIYDQYG   70 (337)
Q Consensus         1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~-----~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G   70 (337)
                      |.+|||+||||+++|+.+|||+||++|+++||||+|+.+     .+.++++|+.|++||+||+||.+|+.||...
T Consensus        14 ~~~d~Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~~~~~~~~~~~~a~~~f~~I~~Ay~vL~d~~~R~~YD~~~   88 (94)
T d1wjza_          14 LKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQR   88 (94)
T ss_dssp             SCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHS
T ss_pred             hccChHHHcCCCCCcCHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHcc
Confidence            568999999999999999999999999999999998764     2467889999999999999999999999754

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

Probab=99.82  E-value=7.6e-22  Score=156.48  Aligned_cols=67  Identities=22%  Similarity=0.404  Sum_probs=61.4

Q ss_pred             CCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhccccccc
Q 019662            3 MDYYNILKVNKNA--TEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGL   74 (337)
Q Consensus         3 ~~~y~iLgv~~~a--~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~   74 (337)
                      .|||+||||+++|  +.++||+|||+||++||||++++.     ++|+.|++||+||+|+.+|+.||.+|....
T Consensus         8 ~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~~~-----e~F~~I~~AY~vLsd~~kR~~YD~~~~~~~   76 (114)
T d1gh6a_           8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE-----EKMKKMNTLYKKMEDGVKYAHQPDFGGFWD   76 (114)
T ss_dssp             HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTT-----TTTHHHHHHHHHHHHHHHSCCSSCCSCCCC
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchhhH-----HHHHHHHHHHHHhCCHHHHHHHhccCCCCc
Confidence            5899999999999  788999999999999999999863     589999999999999999999999886543

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.77  E-value=7.4e-19  Score=128.18  Aligned_cols=74  Identities=36%  Similarity=0.825  Sum_probs=68.9

Q ss_pred             CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEE
Q 019662          156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFV  235 (337)
Q Consensus       156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~  235 (337)
                      ++++.|++++++|||+|||+|+++.+.+.             .+.++|+||||+++|++|+|+|+|++.+++.+|||+|+
T Consensus         1 Prkg~di~~~l~isleea~~G~~~~~~~~-------------~~~~~i~Ip~G~~~G~~ir~~g~G~~~~~~~~GDl~v~   67 (74)
T d1nlta1           1 PQRGKDIKHEISASLEELYKGRTAKLALN-------------RKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFI   67 (74)
T ss_dssp             CCBCCCEEEEEEECTTHHHHCEEEEEEEE-------------EEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEE
T ss_pred             CCCCCCEEEEEEecHHHHHhhcccceeec-------------CccEEEEecccccCCeEEEecCCcCCCCCCCCCCEEEE
Confidence            46789999999999999999999999876             25899999999999999999999999998899999999


Q ss_pred             EEeeCCC
Q 019662          236 IDEKPHD  242 (337)
Q Consensus       236 i~v~~~~  242 (337)
                      |++++|+
T Consensus        68 i~~~pHk   74 (74)
T d1nlta1          68 VSERPHK   74 (74)
T ss_dssp             EEECCCS
T ss_pred             EEecCCC
Confidence            9999995

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.77  E-value=5.8e-19  Score=130.81  Aligned_cols=79  Identities=41%  Similarity=0.716  Sum_probs=71.4

Q ss_pred             CCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEEEEe
Q 019662          160 PPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFVIDE  238 (337)
Q Consensus       160 ~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~i~v  238 (337)
                      +++.+.|+|||||+|+|+++.+.+.|..|++.+    +.++++|.||||+++|++|+|+|+|++.++ +.+|||+|+|++
T Consensus         1 e~v~~~l~vtLee~~~G~~k~i~~~r~~~~g~~----~~~~~~v~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~~~i~~   76 (80)
T d1c3ga1           1 ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHGAS----EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQE   76 (80)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEETTTEE----EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEE
T ss_pred             CCEEEEeEEEHHHHhCCCceEeecceecccCCC----ceEEEEEEECCCCCCCcEEEECCccccCcCCCCCCCEEEEEEe
Confidence            368899999999999999999999999876544    457899999999999999999999999865 578999999999


Q ss_pred             eCCC
Q 019662          239 KPHD  242 (337)
Q Consensus       239 ~~~~  242 (337)
                      ++||
T Consensus        77 ~~HP   80 (80)
T d1c3ga1          77 KSHP   80 (80)
T ss_dssp             CCCS
T ss_pred             CCCC
Confidence            9997

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=2.9e-19  Score=134.11  Aligned_cols=68  Identities=31%  Similarity=0.536  Sum_probs=61.8

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccc
Q 019662            3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEG   73 (337)
Q Consensus         3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~   73 (337)
                      +++|+||+|+.+||.+|||+|||+|+++||||+||.+.+.|.++|+.|++||++|+   ++..||++.+..
T Consensus        16 ~~~y~iL~v~~~as~~eIKkAYrrl~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~---~~~~~d~~~~~~   83 (88)
T d1iura_          16 KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLE---KQAFLDQNADRA   83 (88)
T ss_dssp             HHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHH---HHTTCSSSSSCS
T ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHH---HHHHhhccchHh
Confidence            58999999999999999999999999999999999987789999999999999996   577888766543

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.73  E-value=1.1e-18  Score=127.91  Aligned_cols=66  Identities=26%  Similarity=0.454  Sum_probs=58.1

Q ss_pred             CCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCC----hHHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662            3 MDYYNILKVNKNA--TEDDLKKSYRKLAMKWHPDKNPND----KKEAEARFKQISEAYEVLSDPQKRAIYDQ   68 (337)
Q Consensus         3 ~~~y~iLgv~~~a--~~~~Ik~ayr~la~~~hPd~~~~~----~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~   68 (337)
                      .|||++|||++++  +.+|||+|||+|+++||||+....    .+.+.+.|+.|++||+||+||.+|+.|+.
T Consensus         1 lnyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~a~~~~~~i~~Ay~vL~dp~~R~~Yll   72 (76)
T d1fpoa1           1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLL   72 (76)
T ss_dssp             CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred             CChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            4899999999854  589999999999999999997543    23477889999999999999999999984

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

Probab=99.72  E-value=6.9e-19  Score=129.26  Aligned_cols=61  Identities=13%  Similarity=0.295  Sum_probs=56.9

Q ss_pred             CCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662            3 MDYYNILKVNKNA--TEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQ   68 (337)
Q Consensus         3 ~~~y~iLgv~~~a--~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~   68 (337)
                      .+||+||||++++  +.++||+|||+|+++||||++.+     .++|++|++||++|+|+.+|..||.
T Consensus        11 ~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g~-----~e~~~~in~Ay~~L~d~~~r~~~~~   73 (79)
T d1fafa_          11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS-----HALMQELNSLWGTFKTEVYNLRMNL   73 (79)
T ss_dssp             HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC-----HHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccCCC-----HHHHHHHHHHHHHHCCHHHHHHHcc
Confidence            4799999999998  99999999999999999999864     3689999999999999999999996

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.66  E-value=7.8e-18  Score=129.08  Aligned_cols=64  Identities=22%  Similarity=0.437  Sum_probs=58.4

Q ss_pred             CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC--hHHHHHHHHHHHHHHhhcCChhhhhhh
Q 019662            3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPND--KKEAEARFKQISEAYEVLSDPQKRAIY   66 (337)
Q Consensus         3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~--~~~~~~~f~~i~~Ay~~L~d~~~r~~y   66 (337)
                      .++|++|||+..|+.++||+|||+++++||||+++.+  ...|.+.|+.|++||++|+||.+|+.|
T Consensus        33 ~~~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~I~~Ay~~L~d~~~R~~Y   98 (98)
T d1nz6a_          33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY   98 (98)
T ss_dssp             CCSCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTSTTHHHHHHHHHHHHHHHHHHHTTTCCCCC
T ss_pred             ccCCeecCCCccCCHHHHHHHHHHHHHHhccccCCChHHHHHHHHHHHHHHHHHHHHCCHHHHhcC
Confidence            4789999999999999999999999999999987654  245788999999999999999999987

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.44  E-value=1.2e-13  Score=100.13  Aligned_cols=72  Identities=18%  Similarity=0.165  Sum_probs=64.7

Q ss_pred             cCCCceEEEEeeCHHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECC
Q 019662          246 RDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFP  320 (337)
Q Consensus       246 r~g~dL~~~~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P  320 (337)
                      |+|.|++++++|||.||++|+++.|.+.. +.+.|.||+++++|+++|++|+|.+..+  +.+|||+|++++.-+
T Consensus         2 rkg~di~~~l~isleea~~G~~~~~~~~~-~~~~i~Ip~G~~~G~~ir~~g~G~~~~~--~~~GDl~v~i~~~pH   73 (74)
T d1nlta1           2 QRGKDIKHEISASLEELYKGRTAKLALNR-KILEVHVEPGMKDGQRIVFKGEADQAPD--VIPGDVVFIVSERPH   73 (74)
T ss_dssp             CBCCCEEEEEEECTTHHHHCEEEEEEEEE-EEEEEEECTTCCTTCEEEETTCSCCCTT--CBCCCEEEEEEECCC
T ss_pred             CCCCCEEEEEEecHHHHHhhcccceeecC-ccEEEEecccccCCeEEEecCCcCCCCC--CCCCCEEEEEEecCC
Confidence            67999999999999999999999999754 5799999999999999999999998764  568999999998644

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.33  E-value=3.3e-13  Score=101.49  Aligned_cols=82  Identities=16%  Similarity=0.226  Sum_probs=71.0

Q ss_pred             CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCC--CCCCccEEE
Q 019662          157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQP--NQLPADLVF  234 (337)
Q Consensus       157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~--~~~~GDL~v  234 (337)
                      |+|.|++++++|||.||++|+++.|+..      +|      +.++|+||+|+++|++++++|+|++..  .+.+|||+|
T Consensus         4 R~G~DL~~~~~I~~~eal~G~~~~i~~~------dG------~~i~i~ip~~~~~g~~~~i~g~G~p~~~~~~~rGdL~V   71 (90)
T d1c3ga2           4 RDGDDLIYTLPLSFKESLLGFSKTIQTI------DG------RTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIV   71 (90)
T ss_dssp             EETTEEEEEECCBHHHHHHCEEEEEECS------SS------CEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEE
T ss_pred             EeCCeEEEEEEeCHHHHhcCCeEEEecc------cc------cceecccccccccccccccCCCCCCcCCCCCCcCCEEE
Confidence            5788999999999999999999998876      77      588999999999999999999999853  345899999


Q ss_pred             EEEeeCCCccccCCCc
Q 019662          235 VIDEKPHDVYKRDSND  250 (337)
Q Consensus       235 ~i~v~~~~~f~r~g~d  250 (337)
                      +++|.-+..++.+..+
T Consensus        72 ~~~v~~P~~ls~~qk~   87 (90)
T d1c3ga2          72 KYKVDYPISLNDAQKR   87 (90)
T ss_dssp             EECCBCCSSCCTTHHH
T ss_pred             EEEEEcCCCCCHHHHH
Confidence            9999987777655443

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.19  E-value=8.9e-12  Score=91.39  Aligned_cols=73  Identities=18%  Similarity=0.244  Sum_probs=63.6

Q ss_pred             CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCC--CcCCCEEEECCCCCCCCC-CCCccEE
Q 019662          157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPG--WKKGTKITFPDKGNEQPN-QLPADLV  233 (337)
Q Consensus       157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G--~~~G~~i~l~g~G~~~~~-~~~GDL~  233 (337)
                      |++.|++++++|+|.||+.|+++.++..      +|      +.++|.||++  +++|++++++|+|++..+ +.+|||+
T Consensus         4 R~G~dL~~~~~I~~~eal~G~~~~i~~~------dg------~~~~i~i~~~~~~~~g~~~~i~g~G~p~~~~~~~GDL~   71 (80)
T d1nlta2           4 RDGDDLVYEAEIDLLTAIAGGEFALEHV------SG------DWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLI   71 (80)
T ss_dssp             EETTEEEEEEEEEHHHHHHCBCCEEECS------SS------CEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEE
T ss_pred             EeCCEEEEEEEeCHHHHhCCCEEEEEec------Cc------ceEEEEeCCCCCcCCCCEEEecCCCCCCCCcCCcCcEE
Confidence            5688999999999999999999988876      66      4788888877  999999999999998643 5689999


Q ss_pred             EEEEeeCC
Q 019662          234 FVIDEKPH  241 (337)
Q Consensus       234 v~i~v~~~  241 (337)
                      |+++|.-+
T Consensus        72 v~~~V~~P   79 (80)
T d1nlta2          72 IKFTIKDP   79 (80)
T ss_dssp             EEEEEECC
T ss_pred             EEEEEEcC
Confidence            99999754

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.92  E-value=1.7e-09  Score=78.82  Aligned_cols=70  Identities=21%  Similarity=0.262  Sum_probs=58.3

Q ss_pred             CceEEEEeeCHHHHhCCcEEEEe----cCCCc----EEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEEC
Q 019662          249 NDLIVNHKVSLAEALGGTSVSLI----TLDGR----DLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKF  319 (337)
Q Consensus       249 ~dL~~~~~Isl~eAl~G~~~~i~----~l~g~----~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~  319 (337)
                      .++...+.|||.||+.|+++.|.    ..+|.    ++.|.||+++.+|++++++|+|....+ .+..|||+|.+++.-
T Consensus         1 e~v~~~l~vtLee~~~G~~k~i~~~r~~~~g~~~~~~~~v~Ip~G~~~G~~i~~~g~G~~~~~-~~~~GDl~~~i~~~~   78 (80)
T d1c3ga1           1 ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQ-TGRRKTLQFVIQEKS   78 (80)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTTCCTTCEEEESSCSSBCSS-SSCBCEEEEEEEECC
T ss_pred             CCEEEEeEEEHHHHhCCCceEeecceecccCCCceEEEEEEECCCCCCCcEEEECCccccCcC-CCCCCCEEEEEEeCC
Confidence            47889999999999999976664    34443    588999999999999999999998765 356899999998864