Citrus Sinensis ID: 019695

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------
MGIFLSLFIYLISYLPVILARDVTRVTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPWGNSSVINLDLSHPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTISMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFW
ccHHHHHHHHHHHHHHHHHccccEEEEEEEcccccccccccccEEEEEcccccccccccccccccccccccccccHHHHHHHHHccccEEEEccccccEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHcccEEEEEEEccccccccccccccccccHHHHHHHHHHHHHcccEEcccEEcccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccEEcccccccHHHHHHHHHHHccccccEEEEEEccccccccccHHcccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccHHHHcccc
cccEEEEEEEEEEEHHHEccccccEEEEEEcccEEEEEEcccEEEEEEcccccccccccccccccccEcccccccHHHHHHHHHccccEEEEccccccEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHcccEEEEEEHHHccccccccccccccccHHHHHHHHHHHHHccccEcEEEEccccccccccccEEcHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHccccEEEEEEEEEcccccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccHHHHHccc
MGIFLSLFIYLISYLPVILARDVTRVTIFVDAtktvatndehficatvdwwphdkcnynhcpwgnssvinldlshPLLANAIQAFQSLRIriggslqdqvlydvgdlkapchpfrkmkdglfgfskgcLHMQRWDELNQLFNRTRAIVSFGLnalhgrhnirhnawggawdsnnaRDFLKYTISMGyqidsweygnelsgrtsigasvdaelygkdLINLKNIINELyknssskptilapggffdqEWYAKFLQvsgsnvvngvthhiynlgpgvdpnlvskilnpqrlsRVSETFGNLKQTIEKhgpwasawvgesggaynsggrhvsnTFVNSFW
MGIFLSLFIYLISYLPVILARDVTRVTIFVDAtktvatndEHFICATVDWWPHDKCNYNHCPWGNSSVINLDLSHPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRhnawggawdsnNARDFLKYTISMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGgaynsggrhvSNTFVNSFW
MGIFLSLFIYLISYLPVILARDVTRVTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPWGNSSVINLDLSHPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTISMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFW
**IFLSLFIYLISYLPVILARDVTRVTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPWGNSSVINLDLSHPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTISMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAY****************
*GIFLSLFIYLISYLPVILARDVTRVTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPWGNSSVINLDLSHPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCH*FRK**DGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTISMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFW
MGIFLSLFIYLISYLPVILARDVTRVTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPWGNSSVINLDLSHPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTISMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFW
*GIFLSLFIYLISYLPVILARDVTRVTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPWGNSSVINLDLSHPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTISMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFW
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGIFLSLFIYLISYLPVILARDVTRVTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPWGNSSVINLDLSHPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTISMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFW
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query337 2.2.26 [Sep-21-2011]
Q9FF10 543 Heparanase-like protein 1 yes no 0.997 0.618 0.628 1e-132
Q8L608 539 Heparanase-like protein 2 no no 0.982 0.614 0.626 1e-130
Q9FZP1 536 Heparanase-like protein 3 no no 0.982 0.617 0.491 1e-90
Q9LRC8 527 Baicalin-beta-D-glucuroni N/A no 0.967 0.618 0.359 1e-60
Q90YK5 523 Heparanase OS=Gallus gall yes no 0.519 0.334 0.303 2e-13
Q9MYY0 545 Heparanase OS=Bos taurus yes no 0.510 0.315 0.305 1e-09
Q9Y251 543 Heparanase OS=Homo sapien yes no 0.513 0.318 0.302 2e-09
Q71RP1 536 Heparanase OS=Rattus norv yes no 0.563 0.354 0.282 4e-08
Q6YGZ1 535 Heparanase OS=Mus musculu yes no 0.519 0.327 0.284 4e-07
>sp|Q9FF10|HPSE1_ARATH Heparanase-like protein 1 OS=Arabidopsis thaliana GN=At5g07830 PE=2 SV=1 Back     alignment and function desciption
 Score =  470 bits (1210), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 215/342 (62%), Positives = 272/342 (79%), Gaps = 6/342 (1%)

Query: 1   MGIFLSLFIYLISYLPVI----LARDVTRVTIFVDATKTVATNDEHFICATVDWWPHDKC 56
           MG  + + +  +  L ++    +A+++ R +I +   + V   DE+F+CAT+DWWPHDKC
Sbjct: 1   MGFRVCVIVVFLGCLLLVPEKTMAQEMKRASIVIQGARRVCETDENFVCATLDWWPHDKC 60

Query: 57  NYNHCPWGNSSVINLDLSHPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRK 116
           NY+ CPWG SSVIN+DL+ PLL  AI+AF+ LRIRIGGSLQDQV+YDVG+LK PC PF+K
Sbjct: 61  NYDQCPWGYSSVINMDLTRPLLTKAIKAFKPLRIRIGGSLQDQVIYDVGNLKTPCRPFQK 120

Query: 117 MKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNAR 176
           M  GLFGFSKGCLHM+RWDELN     T A+V+FGLNAL GRH +R  AWGGAWD  N +
Sbjct: 121 MNSGLFGFSKGCLHMKRWDELNSFLTATGAVVTFGLNALRGRHKLRGKAWGGAWDHINTQ 180

Query: 177 DFLKYTISMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNS-SSKP 235
           DFL YT+S GY IDSWE+GNELSG + +GASV AELYGKDLI LK++IN++YKNS   KP
Sbjct: 181 DFLNYTVSKGYVIDSWEFGNELSG-SGVGASVSAELYGKDLIVLKDVINKVYKNSWLHKP 239

Query: 236 TILAPGGFFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSET 295
            ++APGGF++Q+WY K L++SG +VV+ VTHHIYNLG G DP LV KI++P  LS+VS+T
Sbjct: 240 ILVAPGGFYEQQWYTKLLEISGPSVVDVVTHHIYNLGSGNDPALVKKIMDPSYLSQVSKT 299

Query: 296 FGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFW 337
           F ++ QTI++HGPWAS WVGESGGAYNSGGRHVS+TF++SFW
Sbjct: 300 FKDVNQTIQEHGPWASPWVGESGGAYNSGGRHVSDTFIDSFW 341
Endoglycosidase which is a cell surface and extracellular matrix-degrading enzyme. Cleaves heparan sulfate proteoglycans (HSPGs) into heparan sulfate side chains and core proteoglycans.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: -EC: .EC: -
>sp|Q8L608|HPSE2_ARATH Heparanase-like protein 2 OS=Arabidopsis thaliana GN=At5g61250 PE=2 SV=1 Back     alignment and function description
>sp|Q9FZP1|HPSE3_ARATH Heparanase-like protein 3 OS=Arabidopsis thaliana GN=At5g34940 PE=2 SV=2 Back     alignment and function description
>sp|Q9LRC8|BAGLU_SCUBA Baicalin-beta-D-glucuronidase OS=Scutellaria baicalensis GN=SGUS PE=1 SV=1 Back     alignment and function description
>sp|Q90YK5|HPSE_CHICK Heparanase OS=Gallus gallus GN=HPSE PE=1 SV=1 Back     alignment and function description
>sp|Q9MYY0|HPSE_BOVIN Heparanase OS=Bos taurus GN=HPSE PE=2 SV=2 Back     alignment and function description
>sp|Q9Y251|HPSE_HUMAN Heparanase OS=Homo sapiens GN=HPSE PE=1 SV=2 Back     alignment and function description
>sp|Q71RP1|HPSE_RAT Heparanase OS=Rattus norvegicus GN=Hpse PE=2 SV=1 Back     alignment and function description
>sp|Q6YGZ1|HPSE_MOUSE Heparanase OS=Mus musculus GN=Hpse PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query337
255547277 539 Heparanase-2, putative [Ricinus communis 0.952 0.595 0.757 1e-148
224133012 541 predicted protein [Populus trichocarpa] 0.994 0.619 0.735 1e-142
449486980 536 PREDICTED: heparanase-like protein 1-lik 0.982 0.617 0.707 1e-140
225457293 539 PREDICTED: heparanase-like protein 1-lik 0.955 0.597 0.727 1e-140
297733910 513 unnamed protein product [Vitis vinifera] 0.955 0.627 0.727 1e-140
449439297 536 PREDICTED: heparanase-like protein 1-lik 0.952 0.598 0.723 1e-139
449440822 540 PREDICTED: heparanase-like protein 1-lik 0.994 0.620 0.703 1e-135
449477170 540 PREDICTED: LOW QUALITY PROTEIN: heparana 0.994 0.620 0.700 1e-135
356562599 547 PREDICTED: heparanase-like protein 1-lik 0.994 0.612 0.646 1e-134
356507092 1201 PREDICTED: uncharacterized protein LOC10 0.943 0.264 0.673 1e-132
>gi|255547277|ref|XP_002514696.1| Heparanase-2, putative [Ricinus communis] gi|223546300|gb|EEF47802.1| Heparanase-2, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 244/322 (75%), Positives = 285/322 (88%), Gaps = 1/322 (0%)

Query: 16  PVILARDVTRVTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPWGNSSVINLDLSH 75
           PVI A+DV   TI VD T TVA  D++FICAT+DWWPHDKC+YN CPWG SSV+NL+LSH
Sbjct: 15  PVIFAQDVKHATIVVDGTVTVAETDDNFICATLDWWPHDKCDYNQCPWGYSSVLNLNLSH 74

Query: 76  PLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWD 135
           PLLA A+QAF+ LRIRIGGSLQD+VLYDVGDLK PCHPFRKMKDGLFGFSKGCLHM RWD
Sbjct: 75  PLLAKAMQAFRHLRIRIGGSLQDRVLYDVGDLKFPCHPFRKMKDGLFGFSKGCLHMNRWD 134

Query: 136 ELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTISMGYQIDSWEYG 195
           ELN LF++T AIV+F LNALHGRH IR   WGGAWDS+NA DF+ YT+S G++IDSWE+G
Sbjct: 135 ELNLLFSKTGAIVTFSLNALHGRHQIRRGVWGGAWDSSNAYDFMNYTVSKGHKIDSWEFG 194

Query: 196 NELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQV 255
           NELSG + +GASV+AELYGKD+INLKNIINELYKNS  KP+++APGGFF+Q+WYA+FL+V
Sbjct: 195 NELSG-SGVGASVNAELYGKDVINLKNIINELYKNSGFKPSLIAPGGFFNQQWYAEFLKV 253

Query: 256 SGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVG 315
           SGS ++N +THHIYNLG G+DPNLVSKIL+P  LS+++ETF  L QTI++HGPW+SAWVG
Sbjct: 254 SGSGIINILTHHIYNLGAGIDPNLVSKILDPHYLSKITETFSGLAQTIQQHGPWSSAWVG 313

Query: 316 ESGGAYNSGGRHVSNTFVNSFW 337
           ESGGAYNSGGRHVSNTFVNSFW
Sbjct: 314 ESGGAYNSGGRHVSNTFVNSFW 335

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224133012|ref|XP_002321464.1| predicted protein [Populus trichocarpa] gi|222868460|gb|EEF05591.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449486980|ref|XP_004157460.1| PREDICTED: heparanase-like protein 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225457293|ref|XP_002284470.1| PREDICTED: heparanase-like protein 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297733910|emb|CBI15157.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449439297|ref|XP_004137422.1| PREDICTED: heparanase-like protein 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449440822|ref|XP_004138183.1| PREDICTED: heparanase-like protein 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449477170|ref|XP_004154950.1| PREDICTED: LOW QUALITY PROTEIN: heparanase-like protein 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356562599|ref|XP_003549557.1| PREDICTED: heparanase-like protein 1-like [Glycine max] Back     alignment and taxonomy information
>gi|356507092|ref|XP_003522305.1| PREDICTED: uncharacterized protein LOC100807012 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query337
TAIR|locus:2142768 543 GUS2 "AT5G07830" [Arabidopsis 0.997 0.618 0.628 1e-123
TAIR|locus:2163243 539 GUS1 "AT5G61250" [Arabidopsis 0.997 0.623 0.621 4e-122
TAIR|locus:2183542 536 GUS3 "AT5G34940" [Arabidopsis 0.973 0.611 0.498 6e-87
UNIPROTKB|Q9LRC8 527 SGUS "Baicalin-beta-D-glucuron 0.967 0.618 0.362 8.1e-60
UNIPROTKB|F1RVE1 542 HPSE "Uncharacterized protein" 0.522 0.324 0.338 1e-15
ZFIN|ZDB-GENE-041111-200 546 hpse "heparanase" [Danio rerio 0.522 0.322 0.321 5.4e-15
UNIPROTKB|E2RST8 545 HPSE "Uncharacterized protein" 0.522 0.322 0.328 8.4e-15
UNIPROTKB|F1NYI9 523 HPSE "Heparanase" [Gallus gall 0.519 0.334 0.309 2e-14
UNIPROTKB|Q90YK5 523 HPSE "Heparanase" [Gallus gall 0.522 0.336 0.300 2.7e-14
UNIPROTKB|F1N1G1 545 HPSE "Heparanase" [Bos taurus 0.513 0.317 0.317 8.2e-12
TAIR|locus:2142768 GUS2 "AT5G07830" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1216 (433.1 bits), Expect = 1.0e-123, P = 1.0e-123
 Identities = 215/342 (62%), Positives = 272/342 (79%)

Query:     1 MGIFLSLFIYLISYLPVI----LARDVTRVTIFVDATKTVATNDEHFICATVDWWPHDKC 56
             MG  + + +  +  L ++    +A+++ R +I +   + V   DE+F+CAT+DWWPHDKC
Sbjct:     1 MGFRVCVIVVFLGCLLLVPEKTMAQEMKRASIVIQGARRVCETDENFVCATLDWWPHDKC 60

Query:    57 NYNHCPWGNSSVINLDLSHPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRK 116
             NY+ CPWG SSVIN+DL+ PLL  AI+AF+ LRIRIGGSLQDQV+YDVG+LK PC PF+K
Sbjct:    61 NYDQCPWGYSSVINMDLTRPLLTKAIKAFKPLRIRIGGSLQDQVIYDVGNLKTPCRPFQK 120

Query:   117 MKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNAR 176
             M  GLFGFSKGCLHM+RWDELN     T A+V+FGLNAL GRH +R  AWGGAWD  N +
Sbjct:   121 MNSGLFGFSKGCLHMKRWDELNSFLTATGAVVTFGLNALRGRHKLRGKAWGGAWDHINTQ 180

Query:   177 DFLKYTISMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNS-SSKP 235
             DFL YT+S GY IDSWE+GNELSG + +GASV AELYGKDLI LK++IN++YKNS   KP
Sbjct:   181 DFLNYTVSKGYVIDSWEFGNELSG-SGVGASVSAELYGKDLIVLKDVINKVYKNSWLHKP 239

Query:   236 TILAPGGFFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSET 295
              ++APGGF++Q+WY K L++SG +VV+ VTHHIYNLG G DP LV KI++P  LS+VS+T
Sbjct:   240 ILVAPGGFYEQQWYTKLLEISGPSVVDVVTHHIYNLGSGNDPALVKKIMDPSYLSQVSKT 299

Query:   296 FGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFW 337
             F ++ QTI++HGPWAS WVGESGGAYNSGGRHVS+TF++SFW
Sbjct:   300 FKDVNQTIQEHGPWASPWVGESGGAYNSGGRHVSDTFIDSFW 341
GO:0004566 "beta-glucuronidase activity" evidence=ISS;IDA
GO:0005576 "extracellular region" evidence=ISM
GO:0016020 "membrane" evidence=IEA
GO:0016798 "hydrolase activity, acting on glycosyl bonds" evidence=IEA
GO:0005618 "cell wall" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0009826 "unidimensional cell growth" evidence=IMP
TAIR|locus:2163243 GUS1 "AT5G61250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183542 GUS3 "AT5G34940" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q9LRC8 SGUS "Baicalin-beta-D-glucuronidase" [Scutellaria baicalensis (taxid:65409)] Back     alignment and assigned GO terms
UNIPROTKB|F1RVE1 HPSE "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041111-200 hpse "heparanase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E2RST8 HPSE "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1NYI9 HPSE "Heparanase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q90YK5 HPSE "Heparanase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1N1G1 HPSE "Heparanase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FF10HPSE1_ARATH3, ., 2, ., -, ., -0.62860.99700.6187yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query337
pfam03662320 pfam03662, Glyco_hydro_79n, Glycosyl hydrolase fam 0.0
>gnl|CDD|190706 pfam03662, Glyco_hydro_79n, Glycosyl hydrolase family 79, N-terminal domain Back     alignment and domain information 
 Score =  526 bits (1356), Expect = 0.0
 Identities = 187/313 (59%), Positives = 241/313 (76%), Gaps = 1/313 (0%)

Query: 25  RVTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPWGNSSVINLDLSHPLLANAIQA 84
             T+ VD  + +A  DE+F+CAT+DWWP +KC+Y  CPWG +S++NLDL++P+L NAI+A
Sbjct: 3   EATVVVDGRRAIAETDENFVCATLDWWPPEKCDYGQCPWGLASLLNLDLNNPILLNAIKA 62

Query: 85  FQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRT 144
           F  L+IR+GGSLQDQV+YD GDLK PC PF K   GLFGFS+GCL M RWDELN  F +T
Sbjct: 63  FAPLKIRLGGSLQDQVIYDTGDLKTPCTPFTKNTSGLFGFSQGCLPMDRWDELNAFFQKT 122

Query: 145 RAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTISMGYQIDSWEYGNELSGRTSI 204
            AI++FGLNAL GR+ +    WGGAWD  NA  F++YT+S GY+IDSWE GNELSG   +
Sbjct: 123 GAIITFGLNALRGRNKLPKGTWGGAWDYTNAESFIRYTVSKGYKIDSWELGNELSGSG-V 181

Query: 205 GASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQVSGSNVVNGV 264
           GA V AE Y KDLI LKN++ ++Y+N   KP ++APGGFFDQ+W+ + L  +G +V++ +
Sbjct: 182 GARVSAEQYAKDLIKLKNLVKDVYQNVRPKPLVIAPGGFFDQQWFTELLDKTGPSVLDVL 241

Query: 265 THHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSG 324
           THHIYNLGPGVDP+L+ KIL+P  L   ++TF +L+Q I+ HG WA AWVGE+GGAYNSG
Sbjct: 242 THHIYNLGPGVDPHLIEKILDPSYLDGEAKTFSDLQQIIQSHGTWAVAWVGEAGGAYNSG 301

Query: 325 GRHVSNTFVNSFW 337
           G  VSNTF+NSFW
Sbjct: 302 GNLVSNTFINSFW 314

Family of endo-beta-N-glucuronidase, or heparanase. Heparan sulfate proteoglycans (HSPGs) play a key role in the self- assembly, insolubility and barrier properties of basement membranes and extracellular matrices. Hence, cleavage of heparan sulfate (HS) affects the integrity and functional state of tissues and thereby fundamental normal and pathological phenomena involving cell migration and response to changes in the extracellular micro-environment. Heparanase degrades HS at specific intra-chain sites. The enzyme is synthesised as a latent approximately 65 kDa protein that is processed at the N-terminus into a highly active approximately 50 kDa form. Experimental evidence suggests that heparanase may facilitate both tumour cell invasion and neovascularization, both critical steps in cancer progression. The enzyme is also involved in cell migration associated with inflammation and autoimmunity. Length = 320

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 337
PF03662319 Glyco_hydro_79n: Glycosyl hydrolase family 79, N-t 100.0
COG3534 501 AbfA Alpha-L-arabinofuranosidase [Carbohydrate tra 99.93
PF11790239 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; 98.71
PF00150281 Cellulase: Cellulase (glycosyl hydrolase family 5) 98.5
PF01229 486 Glyco_hydro_39: Glycosyl hydrolases family 39; Int 98.5
PF12891239 Glyco_hydro_44: Glycoside hydrolase family 44; Int 98.33
PF07745332 Glyco_hydro_53: Glycosyl hydrolase family 53; Inte 97.9
PF1287688 Cellulase-like: Sugar-binding cellulase-like; Inte 97.66
COG5520 433 O-Glycosyl hydrolase [Cell envelope biogenesis, ou 96.78
PF14587384 Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; P 95.85
smart00633254 Glyco_10 Glycosyl hydrolase family 10. 94.66
PRK10150604 beta-D-glucuronidase; Provisional 94.45
PF02055 496 Glyco_hydro_30: O-Glycosyl hydrolase family 30; In 94.43
COG3867403 Arabinogalactan endo-1,4-beta-galactosidase [Carbo 92.71
PF00332310 Glyco_hydro_17: Glycosyl hydrolases family 17; Int 87.64
COG5309305 Exo-beta-1,3-glucanase [Carbohydrate transport and 86.81
PF02836298 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM 84.59
>PF03662 Glyco_hydro_79n: Glycosyl hydrolase family 79, N-terminal domain ; InterPro: IPR005199 O-Glycosyl hydrolases 3 Back     alignment and domain information 
Probab=100.00  E-value=3.3e-89  Score=634.76  Aligned_cols=313  Identities=54%  Similarity=1.055  Sum_probs=151.5

Q ss_pred             eeEEEEecCCCcccccCCCeEEEEeccCCCCccCCCCCCCCCcccccCCCCCHHHHHHHHHcCCceEeecccccceeeec
Q 019695           24 TRVTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPWGNSSVINLDLSHPLLANAIQAFQSLRIRIGGSLQDQVLYD  103 (337)
Q Consensus        24 ~~~~v~v~~~~~i~~i~~~f~s~~ie~~p~~~~~y~~~~~~~~~~~~~~l~~~~L~~l~k~l~p~~lRiGG~~~D~~~y~  103 (337)
                      +.++|.|+..++|+++|++|+|+|+||||++||+|++|+||+++++|+||+|++|++++|+|+|.+|||||+.||+++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~f~catldwwp~~kc~y~~~~w~~as~~nlDL~n~~L~~a~~al~P~~iRvGGslqD~v~Y~   80 (319)
T PF03662_consen    1 EDGTVVVDGSTAIATTDENFVCATLDWWPPSKCDYGQCSWGNASILNLDLSNPILINAAKALSPLYIRVGGSLQDQVIYD   80 (319)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             Cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            36789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCccCCCCcCCCccceechHHHHHHHHHHhhcCCEEEEEeecCCCCcccCCCCCCCCCChHHHHHHHHHHH
Q 019695          104 VGDLKAPCHPFRKMKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTI  183 (337)
Q Consensus       104 ~~~~~~~~~p~~~~~~~~~g~~~~~lt~~~~~~~~~f~~~~G~~~ifglN~~~g~~~~~~~~~~g~w~~~~A~~lv~y~~  183 (337)
                      .+...++|.|+.++++.+|||+++||++++||+|++|++++|+++|||||++.||+...++++.|.||++||+.|++|++
T Consensus        81 ~~~~~~~c~~~~~~~~~~~~fs~~clt~~rwd~l~~F~~~tG~~liFgLNAL~g~~~~~~~~~~g~WnssNA~~Ll~Yt~  160 (319)
T PF03662_consen   81 TGDNKQPCSPFVKNASGLFGFSNGCLTMSRWDELNNFAQKTGLKLIFGLNALLGRRQLADRDWDGSWNSSNAQSLLKYTA  160 (319)
T ss_dssp             -------------------------------HHHHHHHHHHT-EEEEEE-TTTS-HHHHHHHHHHHHHHH-TTTEEEEEE
T ss_pred             ccccccccccccccccccccccccccchhHHHHHHHHHHHhCCEEEEEecccCCCCCCCCCCcCCCCChHHHHHHHHHHH
Confidence            99888899999888899999999999999999999999999999999999999875443445669999999999999999


Q ss_pred             HcCCccceeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCCeEecCCCCCCHHHHHHHHhhhCCCccce
Q 019695          184 SMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQVSGSNVVNG  263 (337)
Q Consensus       184 ~~g~~l~~wElGNEpd~~~~~~~~~~~~~Ya~d~~~~~~~i~~~~~~~~~~p~l~gP~~~~~~~w~~~fl~~~~~~~id~  263 (337)
                      +|||+|++|||||||+++ +++.++++.||++|+.+||++|+++|+++.++|+|+||+++++.+|+++||++.+++.||+
T Consensus       161 skgy~I~~WELGNEl~g~-g~~~~v~a~qyakD~~~Lr~il~~iy~~~~~~P~v~gP~~~~d~~w~~~FL~~~g~~~vD~  239 (319)
T PF03662_consen  161 SKGYNIDSWELGNELNGS-GVGASVSAEQYAKDFIQLRKILNEIYKNALPGPLVVGPGGFFDADWLKEFLKASGPGVVDA  239 (319)
T ss_dssp             SS-GGG--------HHHH-SSSTT--HHHHHHHH---HHHHHHHHHH-TT---EEEEEESS-GGGHHHHHHHTTTT--SE
T ss_pred             HcCCCccccccccccCCC-CCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCCeEECCCCCCCHHHHHHHHHhcCCCccCE
Confidence            999999999999999996 8899999999999999999999999998889999999999889999999999988756999


Q ss_pred             EEEeecCCCCCCChhhhhccCChHHHHhHHHHHHHHHHHHHHhCCCCceEEcccccCCCCCCCCcchhhhhcCC
Q 019695          264 VTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFW  337 (337)
Q Consensus       264 vS~H~Y~~~~g~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~wlgEt~sa~~~G~~gvSdtF~aalW  337 (337)
                      ||||+|++++|+++++.+++++|.+||.+..+++.+++++++++|++++|||||++||+||+++|||||+++||
T Consensus       240 vT~H~Y~lg~g~d~~l~~~~l~p~~Ld~~~~~~~~~~~~v~~~~p~~~~WlGEtg~Ay~gG~~~vSdtFv~~Fw  313 (319)
T PF03662_consen  240 VTWHHYNLGSGRDPALIEDFLNPSYLDTLADTFQKLQQVVQEYGPGKPVWLGETGSAYNGGAPGVSDTFVAGFW  313 (319)
T ss_dssp             EEEEEEEE--TT-TT-HHHHTS--HHHHHHHHHHHHH-----HHH---EEEEEEEEESTT--TTTTTSTHHHHH
T ss_pred             EEEEecCCCCCchHHHHHHhcChhhhhHHHHHHHHHhhhhcccCCCCCeEEeCcccccCCCCCCccHHHHHHHH
Confidence            99999999988888899999999999999999999999999999999999999999999999999999999998

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of endo-beta-N-glucuronidase, or heparanase belonging to glycoside hydrolase family 79 (GH79 from CAZY). Heparan sulphate proteoglycans (HSPGs) play a key role in the self- assembly, insolubility and barrier properties of basement membranes and extracellular matrices. Hence, cleavage of heparan sulphate (HS) affects the integrity and functional state of tissues and thereby fundamental normal and pathological phenomena involving cell migration and response to changes in the extracellular microenvironment. Heparanase degrades HS at specific intrachain sites. The enzyme is synthesized as a latent approximately 65 kDa protein that is processed at the N terminus into a highly active approximately 50 kDa form. Experimental evidence suggests that heparanase may facilitate both tumor cell invasion and neovascularization, both critical steps in cancer progression. The enzyme is also involved in cell migration associated with inflammation and autoimmunity [].; GO: 0016798 hydrolase activity, acting on glycosyl bonds, 0016020 membrane; PDB: 3VNY_A 3VO0_A 3VNZ_A.
>COG3534 AbfA Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins Back     alignment and domain information
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF12891 Glyco_hydro_44: Glycoside hydrolase family 44; InterPro: IPR024745 This is a family of putative bacterial glycoside hydrolases Back     alignment and domain information
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF12876 Cellulase-like: Sugar-binding cellulase-like; InterPro: IPR024778 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG5520 O-Glycosyl hydrolase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF14587 Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; PDB: 3CLW_B Back     alignment and domain information
>smart00633 Glyco_10 Glycosyl hydrolase family 10 Back     alignment and domain information
>PRK10150 beta-D-glucuronidase; Provisional Back     alignment and domain information
>PF02055 Glyco_hydro_30: O-Glycosyl hydrolase family 30; InterPro: IPR001139 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00332 Glyco_hydro_17: Glycosyl hydrolases family 17; InterPro: IPR000490 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query337
3vny_A 488 Beta-glucuronidase; TIM barrel, greek-KEY, glycosi 7e-37
3ug3_A 504 Alpha-L-arabinofuranosidase; TIM barrel, hydrolase 5e-08
>3vny_A Beta-glucuronidase; TIM barrel, greek-KEY, glycoside hydrolase family 79, hydrol; 1.50A {Acidobacterium capsulatum} PDB: 3vnz_A* 3vo0_A* Length = 488 Back     alignment and structure
 Score =  137 bits (345), Expect = 7e-37
 Identities = 59/321 (18%), Positives = 110/321 (34%), Gaps = 43/321 (13%)

Query: 26  VTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPWGNSSVINLDLSHPLLANAIQAF 85
           V + VDA+    T    +    + +      N N+             ++  LA  ++  
Sbjct: 22  VGLSVDASALGHTIPPDY--TGLSYEQAQMANPNY----------FSGANTQLAGFLRTL 69

Query: 86  QS-LRIRIGGSLQDQVLYDVGDLKAPCHPFRKMK--DGLFGFSKGCLHMQRWDELNQLFN 142
                +RIGG+  +   ++                  G    ++  +  +  + L++  +
Sbjct: 70  GRQGVLRIGGNTSEYTFWNRHAKPTAADEHLAAGPDKGHHAAAREVITPEAVNNLSEFLD 129

Query: 143 RTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTIS--MGYQIDSWEYGNELSG 200
           +T   + +GLN              G     NA D   Y +      ++ +++ GNE   
Sbjct: 130 KTGWKLIYGLNL-------------GKGTPENAADEAAYVMETIGADRLLAFQLGNEPDL 176

Query: 201 RTSIG---ASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQVSG 257
               G   AS D   Y  D       I +   N         P   ++ +W   F     
Sbjct: 177 FYRNGIRPASYDFAAYAGDWQRFFTAIRKRVPN----APFAGPDTAYNTKWLVPFADKFK 232

Query: 258 SNVVNGVTHHIYNLGPGVDPNL-VSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGE 316
            + V  ++ H Y  GP  DP++ + +++ P    R+      LKQ     G      + E
Sbjct: 233 HD-VKFISSHYYAEGPPTDPSMTIERLMKPN--PRLLGETAGLKQVEADTGLP--FRLTE 287

Query: 317 SGGAYNSGGRHVSNTFVNSFW 337
           +   Y  G + VS+TF  + W
Sbjct: 288 TNSCYQGGKQGVSDTFAAALW 308
>3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A Length = 504 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query337
3vny_A 488 Beta-glucuronidase; TIM barrel, greek-KEY, glycosi 100.0
3ug3_A 504 Alpha-L-arabinofuranosidase; TIM barrel, hydrolase 100.0
2y2w_A 574 Arabinofuranosidase; hydrolase, arabinoxylan, glyc 100.0
1qw9_A 502 Arabinosidase, alpha-L-arabinofuranosidase; hydrol 100.0
2vrq_A 496 Alpha-L-arabinofuranosidase; hydrolase, glycosidas 100.0
2c7f_A 513 Alpha-L-arabinofuranosidase; glycosidase, xylan, a 100.0
2e4t_A 519 Endoglucanase, xyloglucanase; TIM barrel, TIM-like 99.87
2yih_A 524 CEL44C, xyloglucanase; hydrolase, GH44, endo-gluca 99.85
3ii1_A 535 Cellulase; CELM2, glucanase-xyanase, glucanase, xy 99.72
4ekj_A 500 Beta-xylosidase; TIM-barrel fold, hemicellulase, h 99.68
1w91_A 503 Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 99.62
3ik2_A 517 Endoglucanase A; TIM-like barrel, hydrolase; 2.20A 99.57
1uhv_A 500 Beta-xylosidase; family 39 glycoside hydrolase, xy 99.42
1ur4_A 399 Galactanase; hydrolase, beta-1, glycoside hydrolas 98.89
1fob_A334 Beta-1,4-galactanase; B/A barrel, glycosyl hydrola 98.42
1hjs_A332 Beta-1,4-galactanase; 4-galactanases, family 53 gl 98.4
3pzg_A383 Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 98.39
3pzt_A327 Endoglucanase; alpha/beta barrel, glycosyl hydrola 98.25
3jug_A345 Beta-mannanase; TIM-barrel, glycosidase, hydrolase 98.25
1rh9_A373 Endo-beta-mannanase; endo-beta-mannase, retaining, 98.07
1qnr_A344 Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt 98.05
3aof_A317 Endoglucanase; glycosyl hydrolase family 5, cellul 98.03
2whl_A294 Beta-mannanase, baman5; glycoside hydrolase, hydro 98.01
1uuq_A440 Mannosyl-oligosaccharide glucosidase; hydrolase, m 98.0
1bqc_A302 Protein (beta-mannanase); glycosyl hydrolase, fami 97.99
1wky_A 464 Endo-beta-1,4-mannanase; TIM barrel, catalytic dom 97.98
4hty_A359 Cellulase; (alpha/beta)8 barrel, family 5 endogluc 97.97
7a3h_A303 Endoglucanase; hydrolase, cellulose degradation, g 97.96
3nco_A320 Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 97.94
1ceo_A343 Cellulase CELC; glycosyl hydrolase, family A/5 of 97.84
2jep_A395 Xyloglucanase; family 5, plant cell WALL, hydrolas 97.84
4awe_A387 Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana 97.83
2cks_A306 Endoglucanase E-5; carbohydrate metabolism, polysa 97.83
3qho_A 458 Endoglucanase, 458AA long hypothetical endo-1,4-be 97.83
1egz_A291 Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL 97.82
4aw7_A 591 GH86A beta-porphyranase; hydrolase, porphyran-hexa 97.81
2wnw_A 447 Activated by transcription factor SSRB; hydrolase, 97.78
1tvn_A293 Cellulase, endoglucanase G; glycoside hydrolase, C 97.67
3icg_A 515 Endoglucanase D; cellulase, xylanase, carbohydrate 97.67
3clw_A 507 Conserved exported protein; structural genomics, u 97.65
1ece_A358 Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. 97.62
3l55_A353 B-1,4-endoglucanase/cellulase; putative beta-1,4-e 97.61
1h1n_A305 Endo type cellulase ENGI; hydrolase, glycosyl hydr 97.61
3ndz_A345 Endoglucanase D; cellotriose, xylanase, carbohydra 97.58
1h4p_A408 Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca 97.45
2c0h_A353 Mannan endo-1,4-beta-mannosidase; hydrolase, signa 97.42
1vjz_A341 Endoglucanase; TM1752, structural genomics, JCSG, 97.36
3vup_A351 Beta-1,4-mannanase; TIM barrel, digestive fluid, H 97.34
2w61_A 555 GAS2P, glycolipid-anchored surface protein 2; glyc 97.28
2osx_A 481 Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel 97.25
2nt0_A 497 Glucosylceramidase; cerezyme, glucocerebrosidase, 97.24
1edg_A380 Endoglucanase A; family A, cellulases, xylanases, 97.22
3civ_A343 Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. 97.19
3n9k_A399 Glucan 1,3-beta-glucosidase; aromatic entranceway/ 97.17
3qr3_A340 Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A 97.12
3ayr_A376 Endoglucanase; TIM barrel, hydrolase, carbohydrate 97.11
1g01_A364 Endoglucanase; alpha/beta barrel, TIM barrel, hydr 97.11
2y24_A 383 Xylanase; hydrolase, GH5 family, aldotetraouronic 97.06
2y8k_A 491 Arabinoxylanase, carbohydrate binding family 6; hy 97.02
3hn3_A613 Beta-G1, beta-glucuronidase; lysosomal enzyme, aci 96.85
3kl0_A 401 Glucuronoxylanase XYNC; alpha beta barrel, (beta/a 96.85
1nq6_A302 XYS1; glycoside hydrolase family 10, xylanase, xyl 96.57
3em5_A316 Beta-1,3-glucanase; glycoprotein, rossmann fold, ( 96.3
3fn9_A 692 Putative beta-galactosidase; structural genomics, 96.21
3lpf_A605 Beta-glucuronidase; alpha/beta barrel, sugar-bindi 96.09
3cmg_A 667 Putative beta-galactosidase; structural genomics, 95.95
3cui_A315 EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine 95.54
3ur8_A323 Glucan endo-1,3-beta-D-glucosidase; glucoside hydr 95.42
1ghs_A306 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg 94.7
3gm8_A 801 Glycoside hydrolase family 2, candidate beta-GLYC; 94.28
1xyz_A347 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola 94.18
2cyg_A312 Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be 93.48
1n82_A331 Xylanase, intra-cellular xylanase; hydrolase; 1.45 93.05
1aq0_A306 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl 93.0
3zr5_A 656 Galactocerebrosidase; hydrolase, GALC, glycosyl hy 92.96
1i1w_A303 Endo-1,4-beta-xylanase; xylan degradation, hydrola 92.96
1ur1_A378 Endoxylanase; hydrolase, family 10, glycoside hydr 92.79
1v0l_A313 Endo-1,4-beta-xylanase A; glycoside hydrolase fami 92.48
2d1z_A 436 Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en 92.35
1ta3_B303 Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), 91.85
1yq2_A 1024 Beta-galactosidase; glycosyl hydrolase family 2, T 91.81
3niy_A341 Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 91.24
3u7b_A327 Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET 90.81
3emz_A331 Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 ba 90.77
2v3g_A283 Endoglucanase H; beta-1 4 beta-1 3 glucanase, lich 90.49
4h41_A340 Putative alpha-L-fucosidase; hydrolase, carbohydra 90.41
2dep_A356 Xylanase B, thermostable celloxylanase; glycosidas 90.18
2uwf_A356 Endoxylanase, alkaline active endoxylanase; hydrol 88.43
1r85_A379 Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A 86.81
3tp4_A 475 Computational design of enzyme; structural genomic 86.34
1w32_A348 Endo-1,4-beta-xylanase A precursor; mutant, calciu 85.06
1kwg_A 645 Beta-galactosidase; TIM barrel, glycoside hydrolas 82.18
1us2_A530 Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca 81.87
3oba_A 1032 Beta-galactosidase; TIM barrel, tetramer, GH2, gly 81.55
2vx5_A396 Cellvibrio japonicus mannanase cjman26C; hydrolase 80.61
>3vny_A Beta-glucuronidase; TIM barrel, greek-KEY, glycoside hydrolase family 79, hydrol; 1.50A {Acidobacterium capsulatum} PDB: 3vnz_A* 3vo0_A* Back     alignment and structure
Probab=100.00  E-value=5.7e-54  Score=426.49  Aligned_cols=283  Identities=21%  Similarity=0.300  Sum_probs=228.6

Q ss_pred             hhhcccceeEEEEecCCCcccccCCCeEEEEeccCCCCccCCCCCCCCCccccc---CCCCCHHHHHHHHHcCC-ceEee
Q 019695           17 VILARDVTRVTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPWGNSSVIN---LDLSHPLLANAIQAFQS-LRIRI   92 (337)
Q Consensus        17 ~~~~~~~~~~~v~v~~~~~i~~i~~~f~s~~ie~~p~~~~~y~~~~~~~~~~~~---~~l~~~~L~~l~k~l~p-~~lRi   92 (337)
                      ++..+++..++|+|++.+++++||++|+|++||.               +.+.+   +++++++|++|+|+|+| ++||+
T Consensus        13 ~~~~~~~~~~~v~v~~~~~~~~v~~~f~g~~~e~---------------s~i~~~~~~~~~~~~v~~l~k~L~~~~~lR~   77 (488)
T 3vny_A           13 SQTTSSPVRVGLSVDASALGHTIPPDYTGLSYEQ---------------AQMANPNYFSGANTQLAGFLRTLGRQGVLRI   77 (488)
T ss_dssp             -----CCEEEEEEEEEEEEEEEECTTCCEEEEEG---------------GGGGCTTTSSTTCHHHHHHHHHHCSSCEEEE
T ss_pred             HhhcCCCCcEEEEEcCCCCCCccCccceEeeeeH---------------hhccCccccCcCCHHHHHHHHHhCCCeEEEe
Confidence            3334678889999999999999999999999993               33333   57889999999999999 99999


Q ss_pred             cccccceeeecCCCCCCCCCCCc-cCCCCc-CCCccceechHHHHHHHHHHhhcCCEEEEEeecCCCCcccCCCCCCCCC
Q 019695           93 GGSLQDQVLYDVGDLKAPCHPFR-KMKDGL-FGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAW  170 (337)
Q Consensus        93 GG~~~D~~~y~~~~~~~~~~p~~-~~~~~~-~g~~~~~lt~~~~~~~~~f~~~~G~~~ifglN~~~g~~~~~~~~~~g~w  170 (337)
                      |||++|.++|+++..+...+|.. ...... -..++.||++.+||+|++||+++|+++|||||++.+             
T Consensus        78 GG~~~d~~~w~~g~~p~~~rp~~~~~~~~~~~~~~~~~~~~~~~def~~f~~~~G~~~~~~lN~g~~-------------  144 (488)
T 3vny_A           78 GGNTSEYTFWNRHAKPTAADEHLAAGPDKGHHAAAREVITPEAVNNLSEFLDKTGWKLIYGLNLGKG-------------  144 (488)
T ss_dssp             ESGGGGSEEECTTCCGGGSCTTCCCCCCCSSSCCCCEEECHHHHHHHHHHHHHHCCEEEEEECTTTS-------------
T ss_pred             CccccceEEEcCCCCCcccCcccccCcchhhccccCceeCHHHHHHHHHHHHHhCCEEEEEEeCCCC-------------
Confidence            99999999999987543333321 000000 001257999999999999999999999999998764             


Q ss_pred             ChHHHHHHHHHHHH--cCCccceeeecccccCCC--CC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCCeEecCCCCCC
Q 019695          171 DSNNARDFLKYTIS--MGYQIDSWEYGNELSGRT--SI-GASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFD  245 (337)
Q Consensus       171 ~~~~A~~lv~y~~~--~g~~l~~wElGNEpd~~~--~~-~~~~~~~~Ya~d~~~~~~~i~~~~~~~~~~p~l~gP~~~~~  245 (337)
                      ++++|+++++||.+  ++++|++||||||||+|.  |+ +.+|++++|+++|++++++|++.+|+.    +++||+...+
T Consensus       145 ~~~~a~~~v~y~~~~~~~~~l~~welGNEpd~~~~~G~~~~~~t~~~Y~~~~~~~a~a~k~~~p~~----~l~gp~~~~~  220 (488)
T 3vny_A          145 TPENAADEAAYVMETIGADRLLAFQLGNEPDLFYRNGIRPASYDFAAYAGDWQRFFTAIRKRVPNA----PFAGPDTAYN  220 (488)
T ss_dssp             CHHHHHHHHHHHHHHHCTTTEEEEEESSCGGGHHHHSSSCTTCCHHHHHHHHHHHHHHHHHHCTTC----CEEEEEESSC
T ss_pred             CHHHHHHHHHHHhhcccCCceeEEEecCcccccccCCccCCCCCHHHHHHHHHHHHHHHHhhCCCC----eEEeCCCCCC
Confidence            68899999999986  899999999999999873  33 568999999999999999999988764    7999998778


Q ss_pred             HHHHHHHHhhhCCCccceEEEeecCCCCCCCh-hhhhccCChH-HHHhHHHHHHHHHHHHHHhCCCCceEEcccccCCCC
Q 019695          246 QEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDP-NLVSKILNPQ-RLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNS  323 (337)
Q Consensus       246 ~~w~~~fl~~~~~~~id~vS~H~Y~~~~g~~~-~~~~~~l~~~-~l~~~~~~~~~~~~~~~~~~~~~~~wlgEt~sa~~~  323 (337)
                      .+|++.||+..+. .||.+|+|+|+.+++.++ .+++++|+|+ .|+.+   ++.+++++++  +++|+|||||||+||+
T Consensus       221 ~~w~~~~l~~~~~-~vd~vS~H~Y~~g~~~~~~~t~~~ll~~~~~l~~~---~~~~~~~~~~--~g~p~~lgEtnsa~~~  294 (488)
T 3vny_A          221 TKWLVPFADKFKH-DVKFISSHYYAEGPPTDPSMTIERLMKPNPRLLGE---TAGLKQVEAD--TGLPFRLTETNSCYQG  294 (488)
T ss_dssp             GGGHHHHHHHTGG-GCSEEEEEEEEECCTTCTTCCHHHHTSCCHHHHHH---HHHHHHHHHH--HCCCEEEEEEEEESTT
T ss_pred             chhhHHHHHhcCc-cCCEEEEeeCCCCCCCCCCcCHHHHcCchHHHHHH---HHHHHHHHhc--CCCCEEEeccccCCCC
Confidence            8999999987775 599999999997755544 4477899986 35544   3333444444  3589999999999999


Q ss_pred             CCCCcchhhhhcCC
Q 019695          324 GGRHVSNTFVNSFW  337 (337)
Q Consensus       324 G~~gvSdtF~aalW  337 (337)
                      |+++|||||++|||
T Consensus       295 G~~~vs~tf~aalw  308 (488)
T 3vny_A          295 GKQGVSDTFAAALW  308 (488)
T ss_dssp             CCTTTTTSTHHHHH
T ss_pred             CCCCcCHHHHHHHH
Confidence            99999999999998
>3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A Back     alignment and structure
>2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum} Back     alignment and structure
>1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A Back     alignment and structure
>2vrq_A Alpha-L-arabinofuranosidase; hydrolase, glycosidase; HET: XYP; 2.00A {Thermobacillus xylanilyticus} PDB: 2vrk_A Back     alignment and structure
>2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A Back     alignment and structure
>2e4t_A Endoglucanase, xyloglucanase; TIM barrel, TIM-like barrel, composite domain of glycosyl HY families 5, 30, 39 and 51, hydrolase; 0.96A {Clostridium thermocellum} PDB: 2e0p_A 2eo7_A* 2ej1_A* 2eex_A* 2eqd_A* Back     alignment and structure
>2yih_A CEL44C, xyloglucanase; hydrolase, GH44, endo-glucanase, carbohydrate-binding protei; HET: BGC; 1.70A {Paenibacillus polymyxa} PDB: 2yjq_A* 2ykk_A* 3zq9_A* Back     alignment and structure
>3ii1_A Cellulase; CELM2, glucanase-xyanase, glucanase, xylanase, bifunctional enzyme, hydrolase; HET: BGC; 2.25A {Uncultured bacterium} PDB: 3fw6_A Back     alignment and structure
>4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} Back     alignment and structure
>1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* Back     alignment and structure
>3ik2_A Endoglucanase A; TIM-like barrel, hydrolase; 2.20A {Clostridium acetobutylicum} Back     alignment and structure
>1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A Back     alignment and structure
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* Back     alignment and structure
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A Back     alignment and structure
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* Back     alignment and structure
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Back     alignment and structure
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Back     alignment and structure
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Back     alignment and structure
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 Back     alignment and structure
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Back     alignment and structure
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Back     alignment and structure
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Back     alignment and structure
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Back     alignment and structure
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Back     alignment and structure
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Back     alignment and structure
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* Back     alignment and structure
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A Back     alignment and structure
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Back     alignment and structure
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Back     alignment and structure
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Back     alignment and structure
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} Back     alignment and structure
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* Back     alignment and structure
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Back     alignment and structure
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 Back     alignment and structure
>4aw7_A GH86A beta-porphyranase; hydrolase, porphyran-hexa-oligosaccharide, complex; HET: GLA GAL L6S AAL; 1.33A {Bacteroides plebeius} Back     alignment and structure
>2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp} Back     alignment and structure
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* Back     alignment and structure
>3clw_A Conserved exported protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Bacteroides fragilis} Back     alignment and structure
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Back     alignment and structure
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A Back     alignment and structure
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Back     alignment and structure
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Back     alignment and structure
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 Back     alignment and structure
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Back     alignment and structure
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} Back     alignment and structure
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Back     alignment and structure
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Back     alignment and structure
>2nt0_A Glucosylceramidase; cerezyme, glucocerebrosidase, glucosylceramide, hydrolysis, disease, hydrolase; HET: NAG; 1.79A {Homo sapiens} SCOP: b.71.1.2 c.1.8.3 PDB: 1y7v_A* 2f61_A* 2j25_A* 2nsx_A* 1ogs_A* 2nt1_A* 3gxd_A* 3gxf_A* 3gxi_A* 3gxm_A* 3rik_A* 3ril_A* 2v3f_A* 2v3e_A* 2v3d_A* 2vt0_A* 2wcg_A* 2xwd_A* 2xwe_A* 2wkl_A* ... Back     alignment and structure
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Back     alignment and structure
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} Back     alignment and structure
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A Back     alignment and structure
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} Back     alignment and structure
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* Back     alignment and structure
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* Back     alignment and structure
>2y24_A Xylanase; hydrolase, GH5 family, aldotetraouronic acid; HET: XYP GCV PG4 PGE; 1.39A {Erwinia chrysanthemi} PDB: 1nof_A* Back     alignment and structure
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} Back     alignment and structure
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* Back     alignment and structure
>3kl0_A Glucuronoxylanase XYNC; alpha beta barrel, (beta/alpha)8 barrel (beta/alpha)8 + beta motif family, hydrolase; HET: TAR HIS; 1.64A {Bacillus subtilis} PDB: 3gtn_A* 3kl3_A* 3kl5_A* Back     alignment and structure
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 Back     alignment and structure
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A* Back     alignment and structure
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} Back     alignment and structure
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A Back     alignment and structure
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} Back     alignment and structure
>3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* Back     alignment and structure
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A Back     alignment and structure
>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 Back     alignment and structure
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} Back     alignment and structure
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 Back     alignment and structure
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 Back     alignment and structure
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A Back     alignment and structure
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A Back     alignment and structure
>3zr5_A Galactocerebrosidase; hydrolase, GALC, glycosyl hydrolase, krabbe disease, TIM BAR lectin domain; HET: NAG; 2.10A {Mus musculus} PDB: 3zr6_A* Back     alignment and structure
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A Back     alignment and structure
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* Back     alignment and structure
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A Back     alignment and structure
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A Back     alignment and structure
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 Back     alignment and structure
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 Back     alignment and structure
>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A Back     alignment and structure
>3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} Back     alignment and structure
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A* Back     alignment and structure
>2v3g_A Endoglucanase H; beta-1 4 beta-1 3 glucanase, lichenase, hydrolase, glycosidase, glycoside hydrolase family 26; HET: BGC NOY; 1.20A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 2bv9_A 2bvd_A* 2cip_A* 2cit_A* 2vi0_A* Back     alignment and structure
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} Back     alignment and structure
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* Back     alignment and structure
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A Back     alignment and structure
>3tp4_A Computational design of enzyme; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.98A {Synthetic construct} PDB: 2x2y_A 2bvy_A 2bvt_A Back     alignment and structure
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A Back     alignment and structure
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Back     alignment and structure
>1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A Back     alignment and structure
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A Back     alignment and structure
>2vx5_A Cellvibrio japonicus mannanase cjman26C; hydrolase; HET: BMA; 1.47A {Cellvibrio japonicus} PDB: 2vx4_A* 2vx6_A* 2vx7_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query337
d1qw9a2367 Alpha-L-arabinofuranosidase, catalytic domain {Bac 99.96
d1uhva2346 Beta-D-xylosidase, catalytic domain {Thermoanaerob 99.6
d1ur4a_ 387 Beta-1,4-galactanase {Bacillus licheniformis [TaxI 98.92
d1foba_334 Beta-1,4-galactanase {Fungus (Aspergillus aculeatu 98.73
d1uuqa_410 Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} 98.46
d1hjsa_332 Beta-1,4-galactanase {Thielavia heterothallica, ak 98.24
d1ceoa_340 Endoglucanase CelC {Clostridium thermocellum [TaxI 98.14
d1wkya2297 Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 97.99
d1bqca_302 Beta-mannanase {Thermomonospora fusca [TaxId: 2021 97.95
d1ecea_358 Endocellulase E1 {Acidothermus cellulolyticus [Tax 97.95
d1egza_291 Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 97.94
d1rh9a1370 Beta-mannanase {Tomato (Lycopersicon esculentum) [ 97.93
d1tvna1293 Endoglucanase Cel5a {Pseudoalteromonas haloplankti 97.9
d1qnra_344 Beta-mannanase {Trichoderma reesei [TaxId: 51453]} 97.88
d1vjza_325 Endoglucanase homologue TM1752 {Thermotoga maritim 97.78
d1h1na_305 Endocellulase EngI {Thermoascus aurantiacus [TaxId 97.75
d7a3ha_300 Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId 97.73
d1xyza_320 Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 97.72
d1g01a_357 Alkaline cellulase K catalytic domain {Bacillus sp 97.48
d1vbua1324 Xylanase {Thermotoga maritima [TaxId: 2336]} 97.42
d1nq6a_302 Xylanase A, catalytic core {Streptomyces halstedii 97.41
d1nofa2277 Glycosyl hydrolase family 5 xylanase, catalytic do 97.17
d1fh9a_312 Xylanase A, catalytic core {Cellulomonas fimi [Tax 96.95
d1edga_380 Endoglucanase CelA {Clostridium cellulolyticum [Ta 96.88
d1n82a_330 Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId 96.74
d2nt0a2354 Glucosylceramidase, catalytic domain {Human (Homo 96.7
d2c0ha1350 endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed 96.69
d1ghsa_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 96.63
d2pb1a1394 Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) 96.56
d1bhga3304 beta-Glucuronidase, domain 3 {Human (Homo sapiens) 96.52
d1v0la_302 Xylanase A, catalytic core {Streptomyces lividans 96.27
d1h4pa_408 Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom 96.24
d2v3ga1273 Endoglucanase H N-terminal domain {Clostridium the 96.09
d1aq0a_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 95.32
d2cyga1312 Plant beta-glucanases {Banana (Musa acuminata), 1, 95.29
d1us3a2364 Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] 95.11
d1ta3b_301 Xylanase A, catalytic core {Emericella nidulans (A 90.61
d1tg7a5354 Beta-galactosidase LacA, N-terminal domain {Penici 89.69
d1jz8a5292 beta-Galactosidase, domain 3 {Escherichia coli [Ta 83.77
d2vzsa5339 Exochitosanase CsxA {Amycolatopsis orientalis [Tax 82.84
d1r85a_371 Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 82.76
>d1qw9a2 c.1.8.3 (A:18-384) Alpha-L-arabinofuranosidase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Alpha-L-arabinofuranosidase, catalytic domain
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.96  E-value=7.7e-29  Score=234.47  Aligned_cols=251  Identities=16%  Similarity=0.159  Sum_probs=185.9

Q ss_pred             ccCCCeEEEEeccCCCCccCCCCCCCCCcccccCCCCCHHHHHHHHHcCCceEee-cccccceeeecCCCCCCCCCCCcc
Q 019695           38 TNDEHFICATVDWWPHDKCNYNHCPWGNSSVINLDLSHPLLANAIQAFQSLRIRI-GGSLQDQVLYDVGDLKAPCHPFRK  116 (337)
Q Consensus        38 ~i~~~f~s~~ie~~p~~~~~y~~~~~~~~~~~~~~l~~~~L~~l~k~l~p~~lRi-GG~~~D~~~y~~~~~~~~~~p~~~  116 (337)
                      .|+|+..|.++||+  .+|+|++.+-+.+.++|.+--.+.|++++|.|+|++||+ |||.+|.++|..+..+...+|...
T Consensus         1 ~i~~~i~g~f~E~l--g~~i~~g~~~~~~~~~~~~G~R~dv~~~l~~l~~~~lR~PGG~~~~~y~W~~~iGp~~~Rp~~~   78 (367)
T d1qw9a2           1 EIDKRIYGSFIEHL--GRAVYGGIYEPGHPQADENGFRQDVIELVKELQVPIIRYPGGNFVSGYNWEDGVGPKEQRPRRL   78 (367)
T ss_dssp             ECCGGGGEEECCSS--TTSTBTTTBCTTCTTBCTTSBBHHHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGCCCEE
T ss_pred             CCChhhccchhhhc--cCcccCceeCCCCCCCCCcccHHHHHHHHHhcCCCEEeeCCccccCccccccccCChHHCCCcc
Confidence            38999999999987  899999998777778888844556999999999999996 999999999999876544444211


Q ss_pred             ------CCCCcCCCccceechHHHHHHHHHHhhcCCEEEEEeecCCCCcccCCCCCCCCCChHHHHHHHHHHH-------
Q 019695          117 ------MKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTI-------  183 (337)
Q Consensus       117 ------~~~~~~g~~~~~lt~~~~~~~~~f~~~~G~~~ifglN~~~g~~~~~~~~~~g~w~~~~A~~lv~y~~-------  183 (337)
                            .++..||          +++|++||+.+|+++++++|++.+             .+++|++||+||.       
T Consensus        79 ~~~w~~~~~~~~G----------~~Ef~~~~~~~gaep~~~vn~g~~-------------~~~~a~d~vey~n~~~~t~~  135 (367)
T d1qw9a2          79 DLAWKSVETNEIG----------LNEFMDWAKMVGAEVNMAVNLGTR-------------GIDAARNLVEYCNHPSGSYY  135 (367)
T ss_dssp             ETTTTEEECCSSC----------HHHHHHHHHHHTCEEEEEECCSSC-------------CHHHHHHHHHHHHCCSSSHH
T ss_pred             CCCCCCcCcCCCC----------HHHHHHHHHHhCCeEEEEEeCCCc-------------cHHHHHHHHHHHccCCCCHH
Confidence                  2344566          799999999999999999999875             4679999999984       


Q ss_pred             ---------HcCCccceeeecccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCCeEecCCCCC-----CHHHH
Q 019695          184 ---------SMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGFF-----DQEWY  249 (337)
Q Consensus       184 ---------~~g~~l~~wElGNEpd~~~~~~~~~~~~~Ya~d~~~~~~~i~~~~~~~~~~p~l~gP~~~~-----~~~w~  249 (337)
                               .+.++|++||||||+++..+.| ..++++|++.++++.++|++++|++    +|++.+...     ..+|.
T Consensus       136 ~~~R~~~G~~~P~~v~yweIGNE~~g~~~~g-~~~~~~Y~~~~~~f~~amk~~dP~i----~lia~g~~~~~~~~~~~w~  210 (367)
T d1qw9a2         136 SDLRIAHGYKEPHKIKTWCLGNAMDGPWQIG-HKTAVEYGRIACEAAKVMKWVDPTI----ELVVCGSSNRNMPTFAEWE  210 (367)
T ss_dssp             HHHHHHTTCCSCCCCCEEEESSCCCSTTSTT-CCCHHHHHHHHHHHHHHHHHHCTTC----EEEECCCSCTTSTTTTHHH
T ss_pred             HHHHHHcCCCCCCCceEEEeccccccccccC-CCCHHHHHHHHHHHHHHHhhcCCCe----eEEEEeCCCCCCcccchHH
Confidence                     2357899999999999864443 4799999999999999999998764    777665421     24799


Q ss_pred             HHHHhhhCCCccceEEEeecCCCCCCChhhhhccCChHHHHhHHHHHHHHHHHH-HH--hCCCCceEEcccccCC
Q 019695          250 AKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTI-EK--HGPWASAWVGESGGAY  321 (337)
Q Consensus       250 ~~fl~~~~~~~id~vS~H~Y~~~~g~~~~~~~~~l~~~~l~~~~~~~~~~~~~~-~~--~~~~~~~wlgEt~sa~  321 (337)
                      +.+++..+. .||.+|.|+|+.....+....  +-....++...+.+..+.+.+ ..  ..++.++.++|-|.-|
T Consensus       211 ~~vl~~~~~-~iD~is~H~Y~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~iavdEwn~wy  282 (367)
T d1qw9a2         211 ATVLDHTYD-HVDYISLHQYYGNRDNDTANY--LALSLEMDDFIRSVVAIADYVKAKKRSKKTIHLSFDEWNVWY  282 (367)
T ss_dssp             HHHHHHHGG-GCSEEEEEEEECCTTCCHHHH--TTTHHHHHHHHHHHHHHHHHHHHHHTCSCCCEEEEEEEEECC
T ss_pred             HHHHhhccc-cCCcccccCCCCCCccchhhh--hhhHHHHHHHHHHHHHHHHHHHhhccCCCCceEEeecccccc
Confidence            999998887 499999999975532222111  111112333322222222222 22  2445778999998744
>d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} Back     information, alignment and structure
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Back     information, alignment and structure
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Back     information, alignment and structure
>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Back     information, alignment and structure
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Back     information, alignment and structure
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Back     information, alignment and structure
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Back     information, alignment and structure
>d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Back     information, alignment and structure
>d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} Back     information, alignment and structure
>d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} Back     information, alignment and structure
>d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} Back     information, alignment and structure
>d1nofa2 c.1.8.3 (A:44-320) Glycosyl hydrolase family 5 xylanase, catalytic domain {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} Back     information, alignment and structure
>d2nt0a2 c.1.8.3 (A:78-431) Glucosylceramidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Back     information, alignment and structure
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
>d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} Back     information, alignment and structure
>d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2v3ga1 c.1.8.3 (A:8-280) Endoglucanase H N-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} Back     information, alignment and structure
>d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} Back     information, alignment and structure
>d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]} Back     information, alignment and structure
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Back     information, alignment and structure
>d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]} Back     information, alignment and structure