Citrus Sinensis ID: 019770

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330------
MNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEINGPGDL
cccccccHHHHHHHHHHccccccEEEEEEccccEEEccccccccccccccccccccccccccHHHHHcccHHHHHHHccccEEEEEEcccccccccHHHHHHHHHccccEEEEccccccccccccEEEEEccEEEEEEEccccccccccccccccccEEEEEEEEEEHHHHHHHHHHccccccccccccccccccEEEEEEHHHHHHHcccccEEEEEccccccccccccHHHHHHcccccccccEEEEccccccccccEEEcccccccHHHHHHHcccccccccccEEEEEcEEEEcccEEEEEEEEEEcccccEEEcccccEEEcEEEcccccc
cccccccHHHHHHHHHHcccccEEEEEEccccccEEHccccccccccccccccccccccccHHHHHHHccHHHHHHHcccEEEEEEccccccccccHHHHHHHHHccccEEEEEcccccccccccEEEEEcccEEEEEEccccHHHHHHHccccEEEEEccccEEEcHHHHHHHHHccccccEEEEccccccccEEEEHHHHHHHHHHHccccEEEEEcccccccccccccEEEEEcccEEEcccEEEEccccccccccEEEccccHHcHHHHHHHccccccHHEHccEEEEEEEEEcccEEEEEEEEEEEccccEEEcccccEEEcEEEcccccc
mnsfnthddtSKIIEKYSKSNVeihtfnqsqyprlcaddfvplpckgktdkdgwyppghgdvfpslmnsgkLDALISQGKEYVFAANSDNLGAIVDLKILNHLIQNKneycmevtpktladvkggtlisYEGKVQLLEIaqvpdehvneFKSIEKFKIFNTNNLWVNLKAIKRLVEADAlkmeiipnpkevdgiKVLQLETAAGAAIRFFDhaigcnvhrsrflpvkatsdlllvqsdlytladgfvtrnearknpanptielgpefkKVGNFlsrfksipsiieldslkvtgdvwfganiTLKGKVTIAAKsgekleipdgavlenkeingpgdl
mnsfnthddtskIIEKYSKSNVEIHTfnqsqyprlCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMeiipnpkevdgIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYTLADGfvtrnearknpanptielgpefKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAksgekleipdgavlenkeingpgdl
MNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEINGPGDL
********************NVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYTLADGFVTRN*********TIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAK************************
MNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEIN*****
*********TSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEINGPGDL
***FNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEING****
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MNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLEIPDGAVLENKEINGPGDL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query336 2.2.26 [Sep-21-2011]
P57751470 UTP--glucose-1-phosphate yes no 1.0 0.714 0.880 1e-176
Q9M9P3469 Probable UTP--glucose-1-p no no 1.0 0.716 0.872 1e-175
O64459471 UTP--glucose-1-phosphate N/A no 1.0 0.713 0.875 1e-174
Q9SDX3467 UTP--glucose-1-phosphate N/A no 1.0 0.719 0.869 1e-173
P19595477 UTP--glucose-1-phosphate N/A no 1.0 0.704 0.866 1e-173
Q9LKG7471 UTP--glucose-1-phosphate N/A no 1.0 0.713 0.857 1e-171
Q43772473 UTP--glucose-1-phosphate N/A no 1.0 0.710 0.848 1e-170
Q91ZJ5508 UTP--glucose-1-phosphate yes no 0.988 0.653 0.573 1e-109
Q07130508 UTP--glucose-1-phosphate yes no 0.988 0.653 0.573 1e-109
O35156508 UTP--glucose-1-phosphate yes no 0.988 0.653 0.570 1e-109
>sp|P57751|UGPA1_ARATH UTP--glucose-1-phosphate uridylyltransferase 1 OS=Arabidopsis thaliana GN=At5g17310 PE=2 SV=1 Back     alignment and function desciption
 Score =  618 bits (1593), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 296/336 (88%), Positives = 315/336 (93%)

Query: 1   MNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHG 60
           MNSFNTHDDT KI+EKY+KSNV+IHTFNQS+YPR+ AD+FVP P KGKTDKDGWYPPGHG
Sbjct: 135 MNSFNTHDDTQKIVEKYTKSNVDIHTFNQSKYPRVVADEFVPWPSKGKTDKDGWYPPGHG 194

Query: 61  DVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLA 120
           DVFPSLMNSGKLDA +SQGKEYVF ANSDNLGAIVDLKIL HLIQNKNEYCMEVTPKTLA
Sbjct: 195 DVFPSLMNSGKLDAFLSQGKEYVFIANSDNLGAIVDLKILKHLIQNKNEYCMEVTPKTLA 254

Query: 121 DVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADAL 180
           DVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIK+LVEADAL
Sbjct: 255 DVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKKLVEADAL 314

Query: 181 KMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLY 240
           KMEIIPNPKEVDG+KVLQLETAAGAAIRFFD+AIG NV RSRFLPVKATSDLLLVQSDLY
Sbjct: 315 KMEIIPNPKEVDGVKVLQLETAAGAAIRFFDNAIGVNVPRSRFLPVKATSDLLLVQSDLY 374

Query: 241 TLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGAN 300
           TL DGFVTRN+AR NP NP IELGPEFKKV +FLSRFKSIPSI+ELDSLKV+GDVWFG+ 
Sbjct: 375 TLVDGFVTRNKARTNPTNPAIELGPEFKKVASFLSRFKSIPSIVELDSLKVSGDVWFGSG 434

Query: 301 ITLKGKVTIAAKSGEKLEIPDGAVLENKEINGPGDL 336
           + LKGKVT+ A +G KLEIPD AVLENK+INGP DL
Sbjct: 435 VVLKGKVTVKANAGTKLEIPDNAVLENKDINGPEDL 470
Plays a central role as a glucosyl donor in cellular metabolic pathways.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 9
>sp|Q9M9P3|UGPA2_ARATH Probable UTP--glucose-1-phosphate uridylyltransferase 2 OS=Arabidopsis thaliana GN=At3g03250 PE=1 SV=1 Back     alignment and function description
>sp|O64459|UGPA_PYRPY UTP--glucose-1-phosphate uridylyltransferase OS=Pyrus pyrifolia PE=2 SV=1 Back     alignment and function description
>sp|Q9SDX3|UGPA_MUSAC UTP--glucose-1-phosphate uridylyltransferase OS=Musa acuminata GN=UGPA PE=2 SV=1 Back     alignment and function description
>sp|P19595|UGPA_SOLTU UTP--glucose-1-phosphate uridylyltransferase OS=Solanum tuberosum PE=1 SV=3 Back     alignment and function description
>sp|Q9LKG7|UGPA_ASTPN UTP--glucose-1-phosphate uridylyltransferase OS=Astragalus penduliflorus GN=UGP PE=2 SV=1 Back     alignment and function description
>sp|Q43772|UGPA_HORVU UTP--glucose-1-phosphate uridylyltransferase OS=Hordeum vulgare PE=2 SV=1 Back     alignment and function description
>sp|Q91ZJ5|UGPA_MOUSE UTP--glucose-1-phosphate uridylyltransferase OS=Mus musculus GN=Ugp2 PE=2 SV=3 Back     alignment and function description
>sp|Q07130|UGPA_BOVIN UTP--glucose-1-phosphate uridylyltransferase OS=Bos taurus GN=UGP2 PE=1 SV=2 Back     alignment and function description
>sp|O35156|UGPA_CRIGR UTP--glucose-1-phosphate uridylyltransferase OS=Cricetulus griseus GN=UGP2 PE=2 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query336
333035984 469 UDP-glucose pyrophosphorylase [Populus d 1.0 0.716 0.898 1e-177
192338746 476 UTP-glucose 1 phosphate uridylyltransfer 1.0 0.705 0.892 1e-175
82659609 469 UDP-glucose pyrophosphorylase [Populus t 1.0 0.716 0.892 1e-175
224135237 469 predicted protein [Populus trichocarpa] 1.0 0.716 0.889 1e-175
32527831 470 UDP-glucose pyrophosphorylase [Populus t 1.0 0.714 0.890 1e-175
255571289 470 utp-glucose-1-phosphate uridylyltransfer 1.0 0.714 0.889 1e-175
15237947 470 UTP--glucose-1-phosphate uridylyltransfe 1.0 0.714 0.880 1e-174
30686293390 UTP--glucose-1-phosphate uridylyltransfe 1.0 0.861 0.880 1e-174
308445439 465 UDP-glucose pyrophosphorylase [Gossypium 1.0 0.722 0.886 1e-173
90820120 476 UDP-glucose pyrophosphorylase [Cucumis m 1.0 0.705 0.880 1e-173
>gi|333035984|gb|AEF13021.1| UDP-glucose pyrophosphorylase [Populus deltoides] Back     alignment and taxonomy information
 Score =  628 bits (1620), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 302/336 (89%), Positives = 317/336 (94%)

Query: 1   MNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHG 60
           MNSFNTHDDT KIIEKYS SN+EIHTFNQSQYPRL ADDFVPLP KG TDKDGWYPPGHG
Sbjct: 134 MNSFNTHDDTQKIIEKYSNSNIEIHTFNQSQYPRLVADDFVPLPSKGHTDKDGWYPPGHG 193

Query: 61  DVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLA 120
           DVFPSL +SGKLDAL+SQGKEYVF ANSDNLGA+VDLKILNHLI+NKNEYCMEVTPKTLA
Sbjct: 194 DVFPSLKSSGKLDALLSQGKEYVFVANSDNLGAVVDLKILNHLIRNKNEYCMEVTPKTLA 253

Query: 121 DVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADAL 180
           DVKGGTLISYEGKVQLLEIAQVPD+HVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADAL
Sbjct: 254 DVKGGTLISYEGKVQLLEIAQVPDQHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADAL 313

Query: 181 KMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLY 240
           KMEIIPNPKEVDG+KVLQLETAAGAAIRFFDHAIG NV RSRFLPVKA+SDLLLVQSDLY
Sbjct: 314 KMEIIPNPKEVDGVKVLQLETAAGAAIRFFDHAIGINVPRSRFLPVKASSDLLLVQSDLY 373

Query: 241 TLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGAN 300
           T+ DGFV RN AR NPANP+IELGPEFKKV +FLSRFKS+PSIIELDSLKV GDVWFGAN
Sbjct: 374 TVVDGFVIRNPARANPANPSIELGPEFKKVASFLSRFKSVPSIIELDSLKVAGDVWFGAN 433

Query: 301 ITLKGKVTIAAKSGEKLEIPDGAVLENKEINGPGDL 336
           +TLKGKV+IA KSG KLEIP+G VLENKEINGP DL
Sbjct: 434 VTLKGKVSIAVKSGVKLEIPEGVVLENKEINGPEDL 469

Source: Populus deltoides

Species: Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|192338746|gb|ACF04278.1| UTP-glucose 1 phosphate uridylyltransferase [Eucalyptus grandis] Back     alignment and taxonomy information
>gi|82659609|gb|ABB88893.1| UDP-glucose pyrophosphorylase [Populus tremula x Populus tremuloides] Back     alignment and taxonomy information
>gi|224135237|ref|XP_002327599.1| predicted protein [Populus trichocarpa] gi|222836153|gb|EEE74574.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|32527831|gb|AAP86317.1| UDP-glucose pyrophosphorylase [Populus tremula x Populus tremuloides] Back     alignment and taxonomy information
>gi|255571289|ref|XP_002526594.1| utp-glucose-1-phosphate uridylyltransferase, putative [Ricinus communis] gi|223534088|gb|EEF35806.1| utp-glucose-1-phosphate uridylyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|15237947|ref|NP_197233.1| UTP--glucose-1-phosphate uridylyltransferase 1 [Arabidopsis thaliana] gi|12585448|sp|P57751.1|UGPA1_ARATH RecName: Full=UTP--glucose-1-phosphate uridylyltransferase 1; AltName: Full=UDP-glucose pyrophosphorylase 1; Short=UDPGP 1; Short=UGPase 1 gi|13430664|gb|AAK25954.1|AF360244_1 putative UDP-glucose pyrophosphorylase [Arabidopsis thaliana] gi|13605671|gb|AAK32829.1|AF361816_1 AT5g17310/MKP11_16 [Arabidopsis thaliana] gi|10177076|dbj|BAB10518.1| UDP-glucose pyrophosphorylase [Arabidopsis thaliana] gi|14532836|gb|AAK64100.1| putative UDP-glucose pyrophosphorylase [Arabidopsis thaliana] gi|332005029|gb|AED92412.1| UTP--glucose-1-phosphate uridylyltransferase 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|30686293|ref|NP_850837.1| UTP--glucose-1-phosphate uridylyltransferase 1 [Arabidopsis thaliana] gi|332005028|gb|AED92411.1| UTP--glucose-1-phosphate uridylyltransferase 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|308445439|gb|ADO32901.1| UDP-glucose pyrophosphorylase [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|90820120|gb|ABD98820.1| UDP-glucose pyrophosphorylase [Cucumis melo] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query336
TAIR|locus:2167220470 UGP2 "AT5G17310" [Arabidopsis 1.0 0.714 0.880 5.9e-160
TAIR|locus:2097785469 UGP1 "AT3G03250" [Arabidopsis 1.0 0.716 0.872 4.8e-158
ZFIN|ZDB-GENE-030131-6352554 ugp2b "UDP-glucose pyrophospho 0.988 0.599 0.585 2.9e-103
ZFIN|ZDB-GENE-090311-46507 ugp2a "UDP-glucose pyrophospho 0.988 0.654 0.585 3.3e-102
UNIPROTKB|E2R5R9508 UGP2 "Uncharacterized protein" 0.985 0.651 0.577 4.9e-101
UNIPROTKB|F1Q1Q8497 UGP2 "Uncharacterized protein" 0.985 0.665 0.577 4.9e-101
UNIPROTKB|F1LQ23502 Ugp2 "Protein Ugp2" [Rattus no 0.985 0.659 0.574 1e-100
UNIPROTKB|F1LQ84507 Ugp2 "Protein Ugp2" [Rattus no 0.985 0.652 0.574 1e-100
UNIPROTKB|Q07130508 UGP2 "UTP--glucose-1-phosphate 0.988 0.653 0.573 1.3e-100
UNIPROTKB|F1SIX3423 UGP2 "UTP--glucose-1-phosphate 0.985 0.782 0.574 1.3e-100
TAIR|locus:2167220 UGP2 "AT5G17310" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1558 (553.5 bits), Expect = 5.9e-160, P = 5.9e-160
 Identities = 296/336 (88%), Positives = 315/336 (93%)

Query:     1 MNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHG 60
             MNSFNTHDDT KI+EKY+KSNV+IHTFNQS+YPR+ AD+FVP P KGKTDKDGWYPPGHG
Sbjct:   135 MNSFNTHDDTQKIVEKYTKSNVDIHTFNQSKYPRVVADEFVPWPSKGKTDKDGWYPPGHG 194

Query:    61 DVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLA 120
             DVFPSLMNSGKLDA +SQGKEYVF ANSDNLGAIVDLKIL HLIQNKNEYCMEVTPKTLA
Sbjct:   195 DVFPSLMNSGKLDAFLSQGKEYVFIANSDNLGAIVDLKILKHLIQNKNEYCMEVTPKTLA 254

Query:   121 DVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADAL 180
             DVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIK+LVEADAL
Sbjct:   255 DVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKKLVEADAL 314

Query:   181 KMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLY 240
             KMEIIPNPKEVDG+KVLQLETAAGAAIRFFD+AIG NV RSRFLPVKATSDLLLVQSDLY
Sbjct:   315 KMEIIPNPKEVDGVKVLQLETAAGAAIRFFDNAIGVNVPRSRFLPVKATSDLLLVQSDLY 374

Query:   241 TLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGAN 300
             TL DGFVTRN+AR NP NP IELGPEFKKV +FLSRFKSIPSI+ELDSLKV+GDVWFG+ 
Sbjct:   375 TLVDGFVTRNKARTNPTNPAIELGPEFKKVASFLSRFKSIPSIVELDSLKVSGDVWFGSG 434

Query:   301 ITLKGKVTIAAKSGEKLEIPDGAVLENKEINGPGDL 336
             + LKGKVT+ A +G KLEIPD AVLENK+INGP DL
Sbjct:   435 VVLKGKVTVKANAGTKLEIPDNAVLENKDINGPEDL 470
GO:0003983 "UTP:glucose-1-phosphate uridylyltransferase activity" evidence=ISS
GO:0005737 "cytoplasm" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA;ISS
GO:0016779 "nucleotidyltransferase activity" evidence=IEA
GO:0046686 "response to cadmium ion" evidence=IEP
GO:0005886 "plasma membrane" evidence=IDA
GO:0009651 "response to salt stress" evidence=IEP
GO:0009555 "pollen development" evidence=IGI
GO:0052543 "callose deposition in cell wall" evidence=IGI
GO:0005829 "cytosol" evidence=IDA
GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA
TAIR|locus:2097785 UGP1 "AT3G03250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-6352 ugp2b "UDP-glucose pyrophosphorylase 2b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-090311-46 ugp2a "UDP-glucose pyrophosphorylase 2a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E2R5R9 UGP2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1Q1Q8 UGP2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1LQ23 Ugp2 "Protein Ugp2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1LQ84 Ugp2 "Protein Ugp2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q07130 UGP2 "UTP--glucose-1-phosphate uridylyltransferase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1SIX3 UGP2 "UTP--glucose-1-phosphate uridylyltransferase" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q07130UGPA_BOVIN2, ., 7, ., 7, ., 90.57350.98800.6535yesno
P79303UGPA_PIG2, ., 7, ., 7, ., 90.56470.98800.6535yesno
Q16851UGPA_HUMAN2, ., 7, ., 7, ., 90.57050.98800.6535yesno
P78811UGPA1_SCHPO2, ., 7, ., 7, ., 90.56840.98800.6561yesno
Q91ZJ5UGPA_MOUSE2, ., 7, ., 7, ., 90.57350.98800.6535yesno
Q9LKG7UGPA_ASTPN2, ., 7, ., 7, ., 90.85711.00.7133N/Ano
Q54YZ0UGPA2_DICDI2, ., 7, ., 7, ., 90.57950.98800.6613yesno
P19595UGPA_SOLTU2, ., 7, ., 7, ., 90.86641.00.7044N/Ano
P57751UGPA1_ARATH2, ., 7, ., 7, ., 90.88091.00.7148yesno
O64459UGPA_PYRPY2, ., 7, ., 7, ., 90.8751.00.7133N/Ano
Q43772UGPA_HORVU2, ., 7, ., 7, ., 90.84821.00.7103N/Ano
Q9SDX3UGPA_MUSAC2, ., 7, ., 7, ., 90.86901.00.7194N/Ano
P32861UGPA1_YEAST2, ., 7, ., 7, ., 90.58030.98510.6633yesno
O35156UGPA_CRIGR2, ., 7, ., 7, ., 90.57050.98800.6535yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.7.90.991
3rd Layer2.7.70.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00440223
UTP--glucose-1-phosphate uridylyltransferase (EC-2.7.7.9) (469 aa)
(Populus trichocarpa)
Predicted Functional Partners:
estExt_fgenesh4_pg.C_LG_XV1054
phosphoglucomutase (EC-5.4.2.2) (551 aa)
   • •• 0.922
estExt_fgenesh4_pm.C_LG_VIII0571
phosphoglucomutase (EC-5.4.2.2) (582 aa)
   • •• 0.920
estExt_fgenesh4_pg.C_LG_X0989
phosphoglucomutase (EC-5.4.2.2) (582 aa)
   • •• 0.920
eugene3.00121193
phosphoglucomutase (EC-5.4.2.2) (631 aa)
   • •• 0.918
estExt_Genewise1_v1.C_LG_IV2986
hypothetical protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolis [...] (819 aa)
   • •• 0.911
estExt_fgenesh4_pg.C_LG_IX1158
hypothetical protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolis [...] (853 aa)
   • •• 0.909
gw1.IV.2527.1
trehalose-6-phosphate synthase (769 aa)
   • •  0.907
estExt_Genewise1_v1.C_LG_IV0101
hypothetical protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolis [...] (950 aa)
     •• 0.902
fgenesh4_pg.C_LG_III000738
hypothetical protein (861 aa)
   • •  0.902
eugene3.00110684
hypothetical protein (853 aa)
   • •  0.901

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query336
PLN02474469 PLN02474, PLN02474, UTP--glucose-1-phosphate uridy 0.0
pfam01704417 pfam01704, UDPGP, UTP--glucose-1-phosphate uridyly 1e-168
cd00897300 cd00897, UGPase_euk, Eukaryotic UGPase catalyses t 1e-161
COG4284472 COG4284, COG4284, UDP-glucose pyrophosphorylase [C 1e-80
cd04180266 cd04180, UGPase_euk_like, Eukaryotic UGPase-like i 9e-71
cd04193323 cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphoryl 9e-11
cd06424315 cd06424, UGGPase, UGGPase catalyzes the synthesis 0.004
>gnl|CDD|178092 PLN02474, PLN02474, UTP--glucose-1-phosphate uridylyltransferase Back     alignment and domain information 
 Score =  689 bits (1779), Expect = 0.0
 Identities = 305/336 (90%), Positives = 319/336 (94%)

Query: 1   MNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHG 60
           MNSFNTHDDT KI+EKY+ SN+EIHTFNQSQYPR+ ADDFVP P KGKTDKDGWYPPGHG
Sbjct: 134 MNSFNTHDDTQKIVEKYTNSNIEIHTFNQSQYPRVVADDFVPWPSKGKTDKDGWYPPGHG 193

Query: 61  DVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLA 120
           DVFPSLMNSGKLDAL+SQGKEYVF ANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLA
Sbjct: 194 DVFPSLMNSGKLDALLSQGKEYVFIANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLA 253

Query: 121 DVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADAL 180
           DVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADAL
Sbjct: 254 DVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADAL 313

Query: 181 KMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLY 240
           KMEIIPNPKEVDG+KVLQLETAAGAAIRFFD+AIG NV RSRFLPVKATSDLLLVQSDLY
Sbjct: 314 KMEIIPNPKEVDGVKVLQLETAAGAAIRFFDNAIGINVPRSRFLPVKATSDLLLVQSDLY 373

Query: 241 TLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGAN 300
           TL DGFV RN+AR NP+NP+IELGPEFKKV NFLSRFKSIPSI+ELDSLKV+GDVWFG+ 
Sbjct: 374 TLVDGFVIRNKARTNPSNPSIELGPEFKKVANFLSRFKSIPSIVELDSLKVSGDVWFGSG 433

Query: 301 ITLKGKVTIAAKSGEKLEIPDGAVLENKEINGPGDL 336
           I LKGKVTI AKSG KLEIPDGAVLENK+INGP DL
Sbjct: 434 IVLKGKVTITAKSGVKLEIPDGAVLENKDINGPEDL 469

Length = 469
>gnl|CDD|201928 pfam01704, UDPGP, UTP--glucose-1-phosphate uridylyltransferase Back     alignment and domain information
>gnl|CDD|132998 cd00897, UGPase_euk, Eukaryotic UGPase catalyses the synthesis of UDP-Glucose Back     alignment and domain information
>gnl|CDD|226734 COG4284, COG4284, UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|133023 cd04180, UGPase_euk_like, Eukaryotic UGPase-like includes UDPase and UDPGlcNAc pyrophosphorylase enzymes Back     alignment and domain information
>gnl|CDD|133036 cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc Back     alignment and domain information
>gnl|CDD|133046 cd06424, UGGPase, UGGPase catalyzes the synthesis of UDP-Glucose/UDP-Galactose Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 336
KOG2638498 consensus UDP-glucose pyrophosphorylase [Carbohydr 100.0
PLN02474469 UTP--glucose-1-phosphate uridylyltransferase 100.0
PF01704420 UDPGP: UTP--glucose-1-phosphate uridylyltransferas 100.0
PLN02830615 UDP-sugar pyrophosphorylase 100.0
cd00897300 UGPase_euk Eukaryotic UGPase catalyses the synthes 100.0
cd04193323 UDPGlcNAc_PPase UDPGlcNAc pyrophosphorylase catala 100.0
PLN02435493 probable UDP-N-acetylglucosamine pyrophosphorylase 100.0
COG4284472 UDP-glucose pyrophosphorylase [Carbohydrate transp 100.0
PTZ00339482 UDP-N-acetylglucosamine pyrophosphorylase; Provisi 100.0
cd06424315 UGGPase UGGPase catalyzes the synthesis of UDP-Glu 100.0
cd04180266 UGPase_euk_like Eukaryotic UGPase-like includes UD 100.0
KOG2388477 consensus UDP-N-acetylglucosamine pyrophosphorylas 100.0
COG1207 460 GlmU N-acetylglucosamine-1-phosphate uridyltransfe 97.25
PF14134513 DUF4301: Domain of unknown function (DUF4301) 96.55
COG4284472 UDP-glucose pyrophosphorylase [Carbohydrate transp 95.93
PRK05293380 glgC glucose-1-phosphate adenylyltransferase; Prov 93.81
PRK14359430 glmU bifunctional N-acetylglucosamine-1-phosphate 93.64
PRK00844407 glgC glucose-1-phosphate adenylyltransferase; Prov 91.74
COG0448393 GlgC ADP-glucose pyrophosphorylase [Carbohydrate t 91.71
PRK14357 448 glmU bifunctional N-acetylglucosamine-1-phosphate 90.63
PRK00725425 glgC glucose-1-phosphate adenylyltransferase; Prov 90.55
PRK14360 450 glmU bifunctional N-acetylglucosamine-1-phosphate 88.19
PRK02862429 glgC glucose-1-phosphate adenylyltransferase; Prov 85.48
PRK14356 456 glmU bifunctional N-acetylglucosamine-1-phosphate 85.47
KOG1460407 consensus GDP-mannose pyrophosphorylase [Carbohydr 84.16
TIGR02091361 glgC glucose-1-phosphate adenylyltransferase. This 83.58
TIGR01208353 rmlA_long glucose-1-phosphate thymidylylransferase 82.65
TIGR02092369 glgD glucose-1-phosphate adenylyltransferase, GlgD 80.83
>KOG2638 consensus UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=3.4e-107  Score=784.02  Aligned_cols=336  Identities=65%  Similarity=1.059  Sum_probs=330.9

Q ss_pred             CCCcCchHHHHHHHHHcCCCCceeEEEecCCceeeecCCCcccCC-CCCCCCcccCCCCCccchhhhhhcChHHHHHHcC
Q 019770            1 MNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPC-KGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQG   79 (336)
Q Consensus         1 MtS~~T~~~T~~~lek~~~fgl~v~~F~Q~~~P~l~~~~~~~~~~-~~~~~~~~~~P~GhGdi~~aL~~sGlld~l~~~G   79 (336)
                      ||||+|+++|.++++||.++.++|++|.|+++|+++.|+++|++. .++++..+||||||||+|.+|+.||+||+|+++|
T Consensus       158 MNSfnTdedT~kil~ky~~~kv~i~TF~QS~~PRi~~etlLPv~~~~~d~~~d~WYPPGHGd~f~sl~nSG~Ld~llaqG  237 (498)
T KOG2638|consen  158 MNSFNTDEDTQKILKKYAGSKVDIKTFNQSKYPRIDKETLLPVPKLEADSDNEAWYPPGHGDLFDSLHNSGLLDKLLAQG  237 (498)
T ss_pred             ecccccchHHHHHHHHhcCCceeEEEeccccCCccccccccCCCcccCCCCcccccCCCCccHHHHHhccchHHHHHhCC
Confidence            999999999999999999999999999999999999999999998 5666779999999999999999999999999999


Q ss_pred             ceEEEEEeCccccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEeeCCeEEEEEeecCChhhhhhhcccCCccee
Q 019770           80 KEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIF  159 (336)
Q Consensus        80 ~~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~~g~~~~vEysqlp~~~~~~~~~~~~~~~f  159 (336)
                      +||+|+||+|||||++|..||.|++.++++|+||||+||.+|.|||+|+.++|+++++||+|+|++++++|++.++|++|
T Consensus       238 kEylFVSNiDNLGAtvDL~ILn~~i~~~~ey~MEvTdKT~aDvKgGtLi~y~G~lrlLEiaQVP~ehv~eFkS~kkFkif  317 (498)
T KOG2638|consen  238 KEYLFVSNIDNLGATVDLNILNHVINNNIEYLMEVTDKTRADVKGGTLIQYEGKLRLLEIAQVPKEHVDEFKSIKKFKIF  317 (498)
T ss_pred             ceEEEEeccccccceeeHHHHHHHhcCCCceEEEecccchhhcccceEEeecCEEEEEEeccCChhHhhhhccceeEEEe
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeeEEEEHHHHHHHHHhcCcCcceeecccccC-CCCceehhhhhchHHhhcccceEEEEeccceeeccCCCchhHHhhh
Q 019770          160 NTNNLWVNLKAIKRLVEADALKMEIIPNPKEVD-GIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSD  238 (336)
Q Consensus       160 ntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~-~~~~~qlE~~~~d~~~~~~~~~~i~V~R~rF~PVKn~~dll~~~sd  238 (336)
                      ||||+|++|.+++++++++.+.|++|+|+|+++ +.+++||||++|+||++|+++.++.|||+||+|||+|+|||+++||
T Consensus       318 NTNNlWinLkavKrlve~~~l~meIi~N~kti~~~~~viQleTa~GaaIk~F~na~gv~VpRsRFlPVKt~sDLlLv~S~  397 (498)
T KOG2638|consen  318 NTNNLWINLKAVKKLVEENALNMEIIVNPKTIDRGIEVIQLETAAGAAIKFFDNAIGVNVPRSRFLPVKTCSDLLLVMSN  397 (498)
T ss_pred             ccCCeEEehHHHHHHhhcCcccceeecChhhccCCceEEEEhhhhhHHHHhCCCceeeeccccccccccccccceeeecc
Confidence            999999999999999999999999999999999 8999999999999999999999999999999999999999999999


Q ss_pred             hhccccCeeEecCCcCCCCCCeEEeCCCcccHHHHhhhcCCCCCccccceEEEecceEEccCeEEEEEEEEEcCCCCeEE
Q 019770          239 LYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAKSGEKLE  318 (336)
Q Consensus       239 ~y~~~~g~~~~~~~r~~~~~P~I~L~~~f~~~~~~~~r~~~~p~i~~~~~L~V~Gdv~fg~~v~l~G~v~i~a~~~~~~~  318 (336)
                      +|.+++|.+.++|.|.++..|.|+||++|+++++|..||++||+|++|+||||+|||+||+||+|+|+|+|.|++|.+++
T Consensus       398 Ly~ld~Gsl~l~~~r~~~t~P~vkLg~~F~kv~~f~~rfp~iP~ileLdhLtVsGdV~FGknV~LkGtViIia~~~~~i~  477 (498)
T KOG2638|consen  398 LYDLDNGSLTLSPSRFGPTPPLVKLGSEFKKVEDFLGRFPGIPDILELDHLTVSGDVWFGKNVSLKGTVIIIANEGDRID  477 (498)
T ss_pred             eeeccCCeEEechhhcCCCCCeeecchhhhHHHHHHhcCCCCCccceeceEEEeccEEeccceEEeeEEEEEecCCCeee
Confidence            99999999999999988899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCeeecceeeCCCCC
Q 019770          319 IPDGAVLENKEINGPGDL  336 (336)
Q Consensus       319 ip~g~~l~n~~~~~~~~~  336 (336)
                      ||||++|||++|+||++|
T Consensus       478 IP~gsVLEn~~v~gn~~i  495 (498)
T KOG2638|consen  478 IPDGSVLENKIVSGNLRI  495 (498)
T ss_pred             cCCCCeeecceEeccccc
Confidence            999999999999999987

>PLN02474 UTP--glucose-1-phosphate uridylyltransferase Back     alignment and domain information
>PF01704 UDPGP: UTP--glucose-1-phosphate uridylyltransferase; InterPro: IPR002618 This family consists of UTP--glucose-1-phosphate uridylyltransferases (2 Back     alignment and domain information
>PLN02830 UDP-sugar pyrophosphorylase Back     alignment and domain information
>cd00897 UGPase_euk Eukaryotic UGPase catalyses the synthesis of UDP-Glucose Back     alignment and domain information
>cd04193 UDPGlcNAc_PPase UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc Back     alignment and domain information
>PLN02435 probable UDP-N-acetylglucosamine pyrophosphorylase Back     alignment and domain information
>COG4284 UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PTZ00339 UDP-N-acetylglucosamine pyrophosphorylase; Provisional Back     alignment and domain information
>cd06424 UGGPase UGGPase catalyzes the synthesis of UDP-Glucose/UDP-Galactose Back     alignment and domain information
>cd04180 UGPase_euk_like Eukaryotic UGPase-like includes UDPase and UDPGlcNAc pyrophosphorylase enzymes Back     alignment and domain information
>KOG2388 consensus UDP-N-acetylglucosamine pyrophosphorylase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>COG1207 GlmU N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF14134 DUF4301: Domain of unknown function (DUF4301) Back     alignment and domain information
>COG4284 UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK05293 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>PRK14359 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>PRK00844 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>COG0448 GlgC ADP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>PRK00725 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>PRK14360 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>PRK02862 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>PRK14356 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>KOG1460 consensus GDP-mannose pyrophosphorylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR02091 glgC glucose-1-phosphate adenylyltransferase Back     alignment and domain information
>TIGR01208 rmlA_long glucose-1-phosphate thymidylylransferase, long form Back     alignment and domain information
>TIGR02092 glgD glucose-1-phosphate adenylyltransferase, GlgD subunit Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query336
2icx_A469 Crystal Structure Of A Putative Udp-Glucose Pyropho 1e-176
1z90_A469 X-Ray Structure Of Gene Product From Arabidopsis Th 1e-176
2i5k_A488 Crystal Structure Of Ugp1p Length = 488 1e-110
3r2w_A528 Crystal Strucutre Of Udp-Glucose Pyrophosphorylase 1e-109
3gue_A484 Crystal Structure Of Udp-Glucose Phosphorylase From 5e-53
2oef_A505 Open And Closed Structures Of The Udp-Glucose Pyrop 9e-47
3oc9_A405 Crystal Structure Of Putative Udp-N-Acetylglucosami 2e-08
>pdb|2ICX|A Chain A, Crystal Structure Of A Putative Udp-Glucose Pyrophosphorylase From Arabidopsis Thaliana With Bound Utp Length = 469 Back     alignment and structure 
Iteration: 1

 Score =  612 bits (1579), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 293/336 (87%), Positives = 315/336 (93%)
Query: 1   MNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHG 60
           MNSFNTHDDT KI+EKY+ SNV+IHTFNQS+YPR+ AD+FVP P KGKTDK+GWYPPGHG
Sbjct: 134 MNSFNTHDDTHKIVEKYTNSNVDIHTFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHG 193
Query: 61  DVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLA 120
           DVFP+LMNSGKLD  +SQGKEYVF ANSDNLGAIVDL IL HLIQNKNEYCMEVTPKTLA
Sbjct: 194 DVFPALMNSGKLDTFLSQGKEYVFVANSDNLGAIVDLTILKHLIQNKNEYCMEVTPKTLA 253
Query: 121 DVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADAL 180
           DVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIK+LVEADAL
Sbjct: 254 DVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKKLVEADAL 313
Query: 181 KMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLY 240
           KMEIIPNPKEVDG+KVLQLETAAGAAIRFFD+AIG NV RSRFLPVKA+SDLLLVQSDLY
Sbjct: 314 KMEIIPNPKEVDGVKVLQLETAAGAAIRFFDNAIGVNVPRSRFLPVKASSDLLLVQSDLY 373
Query: 241 TLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGAN 300
           TL DGFVTRN+AR NP+NP+IELGPEFKKV  FLSRFKSIPSI+ELDSLKV+GDVWFG++
Sbjct: 374 TLVDGFVTRNKARTNPSNPSIELGPEFKKVATFLSRFKSIPSIVELDSLKVSGDVWFGSS 433
Query: 301 ITLKGKVTIAAKSGEKLEIPDGAVLENKEINGPGDL 336
           I LKGKVT+AAKSG KLEIPD AV+ENK INGP DL
Sbjct: 434 IVLKGKVTVAAKSGVKLEIPDRAVVENKNINGPEDL 469
>pdb|1Z90|A Chain A, X-Ray Structure Of Gene Product From Arabidopsis Thaliana At3g03250, A Putative Udp-Glucose Pyrophosphorylase Length = 469 Back     alignment and structure
>pdb|2I5K|A Chain A, Crystal Structure Of Ugp1p Length = 488 Back     alignment and structure
>pdb|3R2W|A Chain A, Crystal Strucutre Of Udp-Glucose Pyrophosphorylase Of Homo Sapiens Length = 528 Back     alignment and structure
>pdb|3GUE|A Chain A, Crystal Structure Of Udp-Glucose Phosphorylase From Trypanosoma Brucei, (Tb10.389.0330) Length = 484 Back     alignment and structure
>pdb|2OEF|A Chain A, Open And Closed Structures Of The Udp-Glucose Pyrophosphorylase From Leishmania Major Length = 505 Back     alignment and structure
>pdb|3OC9|A Chain A, Crystal Structure Of Putative Udp-N-Acetylglucosamine Pyrophosphorylase From Entamoeba Histolytica Length = 405 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query336
2icy_A469 Probable UTP-glucose-1-phosphate uridylyltransfera 1e-139
3r3i_A528 UTP--glucose-1-phosphate uridylyltransferase; ross 1e-132
2i5k_A488 UTP--glucose-1-phosphate uridylyltransferase; LEFT 1e-131
3gue_A484 UTP-glucose-1-phosphate uridylyltransferase 2; pho 1e-118
2oeg_A505 UTP-glucose-1-phosphate uridylyltransferase 2, put 1e-117
1jv1_A505 Glcnac1P uridyltransferase isoform 1: AGX1; nucleo 2e-72
3oc9_A405 UDP-N-acetylglucosamine pyrophosphorylase; structu 5e-69
3ogz_A630 UDP-sugar pyrophosphorylase; LEFT handed beta heli 5e-64
2yqc_A486 UDP-N-acetylglucosamine pyrophosphorylase; uridine 1e-57
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A Length = 528 Back     alignment and structure
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae} Length = 488 Back     alignment and structure
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei} Length = 484 Back     alignment and structure
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A* Length = 505 Back     alignment and structure
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A* Length = 505 Back     alignment and structure
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica} Length = 405 Back     alignment and structure
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A* Length = 630 Back     alignment and structure
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A* Length = 486 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query336
3r3i_A528 UTP--glucose-1-phosphate uridylyltransferase; ross 100.0
3gue_A484 UTP-glucose-1-phosphate uridylyltransferase 2; pho 100.0
2icy_A469 Probable UTP-glucose-1-phosphate uridylyltransfera 100.0
2i5k_A488 UTP--glucose-1-phosphate uridylyltransferase; LEFT 100.0
2oeg_A505 UTP-glucose-1-phosphate uridylyltransferase 2, put 100.0
3ogz_A630 UDP-sugar pyrophosphorylase; LEFT handed beta heli 100.0
3oc9_A405 UDP-N-acetylglucosamine pyrophosphorylase; structu 100.0
2yqc_A486 UDP-N-acetylglucosamine pyrophosphorylase; uridine 100.0
1jv1_A505 Glcnac1P uridyltransferase isoform 1: AGX1; nucleo 100.0
3st8_A 501 Bifunctional protein GLMU; acetyltransferase, pyro 92.76
3brk_X420 Glucose-1-phosphate adenylyltransferase; ADP-gluco 87.03
1yp2_A451 Glucose-1-phosphate adenylyltransferase small subu 85.95
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A Back     alignment and structure
Probab=100.00  E-value=2.8e-104  Score=799.95  Aligned_cols=336  Identities=57%  Similarity=0.958  Sum_probs=316.3

Q ss_pred             CCCcCchHHHHHHHHHcCCCCceeEEEecCCceeeecCCCcccCCCCC---CCCcccCCCCCccchhhhhhcChHHHHHH
Q 019770            1 MNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGK---TDKDGWYPPGHGDVFPSLMNSGKLDALIS   77 (336)
Q Consensus         1 MtS~~T~~~T~~~lek~~~fgl~v~~F~Q~~~P~l~~~~~~~~~~~~~---~~~~~~~P~GhGdi~~aL~~sGlld~l~~   77 (336)
                      |||+.||++|++||++|+|||.+|++|+|+++||++.+|+++++++.+   +++++|+|+||||+|.||++||+||+|++
T Consensus       182 MTS~~T~~~T~~~f~k~~~fg~~V~~F~Q~~~P~i~~dg~l~l~~~~~~~~~~~~~~~P~GhGdiy~aL~~sGlLd~l~~  261 (528)
T 3r3i_A          182 MNSFNTDEDTKKILQKYNHCRVKIYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIG  261 (528)
T ss_dssp             EECTTTHHHHHSSCGGGTTSSCCEEEEECCCBCCEETTTCCCC-------------CBCCBTTTHHHHHHHHSHHHHHHH
T ss_pred             EeccchhHHHHHHHHhcCccCCCeEEEEeCCeeeEecCCceecccccccCCCcceeeCcCCChHHHHHHHHCChHHHHHh
Confidence            999999999999999999999999999999999999999999988532   37899999999999999999999999999


Q ss_pred             cCceEEEEEeCccccccccHHHHHHHHhc----CCceeEEeeecccCCcceeEEEeeCCeEEEEEeecCChhhhhhhccc
Q 019770           78 QGKEYVFAANSDNLGAIVDLKILNHLIQN----KNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSI  153 (336)
Q Consensus        78 ~G~~yi~v~nvDNL~~~~Dp~~lg~~~~~----~~~~~~evv~k~~~dekgG~l~~~~g~~~~vEysqlp~~~~~~~~~~  153 (336)
                      +|+||+|++|+||+++++||.||||++.+    +++|+||||+|+.++||||++|+++|+++++||+|+|+++++++++.
T Consensus       262 ~Gieyi~v~nvDNlga~vDp~~Lg~~~~~~~~~~~d~~~kVv~Kt~~dek~Gvl~~~dGk~~vvEyseip~e~~~~~~g~  341 (528)
T 3r3i_A          262 EGKEYIFVSNIDNLGATVDLYILNHLMNPPNGKRCEFVMEVTNKTRADVKGGTLTQYEGKLRLVEIAQVPKAHVDEFKSV  341 (528)
T ss_dssp             TTCCEEEEEETTBTTCCCCHHHHHHHSSCSSSCCCSEEEEECCCCTTCCSSCEEECSSSSCEEECTTSSCGGGTTTSSCS
T ss_pred             cCCEEEEEEccCCcccccCHHHHHHHHhcccccCCcEEEEEeEccccCCcccEEEEECCeEEEEEecCCChhHhhccCCc
Confidence            99999999999998888999999999998    99999999999999999999999999999999999999999999999


Q ss_pred             CCcceeeeeeEEEEHHHHHHHHHhcCcCcceeecccccC-CCCceehhhhhchHHhhcccceEEEEeccceeeccCCCch
Q 019770          154 EKFKIFNTNNLWVNLKAIKRLVEADALKMEIIPNPKEVD-GIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDL  232 (336)
Q Consensus       154 ~~~~~fntnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~-~~~~~qlE~~~~d~~~~~~~~~~i~V~R~rF~PVKn~~dl  232 (336)
                      .+|++||||||||+|++|+++++...+.||+|+|+|+++ +++++||||||||+|++|+++.+++|||+||+|||||+||
T Consensus       342 ~~f~~~Ntnnlw~~L~~L~~v~~~~~l~Lp~ivn~K~vd~~~~viqlEt~igd~i~~f~~~~~i~VpR~rF~PvKn~sdL  421 (528)
T 3r3i_A          342 SKFKIFNTNNLWISLAAVKRLQEQNAIDMEIIVNAKTLDGGLNVIQLETAVGAAIKSFENSLGINVPRSRFLPVKTTSDL  421 (528)
T ss_dssp             SSCCCCEEEEEEEEHHHHHHHHHTTCCCCCCEEEEECCSSSSCEEEEEBCSTTCSTTSSSCCCEECCGGGCCBCCSHHHH
T ss_pred             ccCCeEEEEEEEEEHHHHHHHHHhCCCCCCceecCcccCCCCCEEEeHHHHHHHHHhccCcEEEEEehHHcccccchHHH
Confidence            999999999999999999999998788999999999998 8999999999999999999999999999999999999999


Q ss_pred             hHHhhhhhccccCeeEecCCcCCCCCCeEEeCCCcccHHHHhhhcCCCCCccccceEEEecceEEccCeEEEEEEEEEcC
Q 019770          233 LLVQSDLYTLADGFVTRNEARKNPANPTIELGPEFKKVGNFLSRFKSIPSIIELDSLKVTGDVWFGANITLKGKVTIAAK  312 (336)
Q Consensus       233 l~~~sd~y~~~~g~~~~~~~r~~~~~P~I~L~~~f~~~~~~~~r~~~~p~i~~~~~L~V~Gdv~fg~~v~l~G~v~i~a~  312 (336)
                      |++|||+|.+++|.++++|.|.++..|.|+||++|+++++|++||+++|+|++|++|||+|||+||+||+|+|+|+|+|+
T Consensus       422 ll~~Sdly~l~~g~l~~~~~r~~~~~P~v~L~~~~~~v~~f~~rf~~iP~l~~~~~LtV~Gdv~fg~~v~l~G~v~i~~~  501 (528)
T 3r3i_A          422 LLVMSNLYSLNAGSLTMSEKREFPTVPLVKLGSSFTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIAN  501 (528)
T ss_dssp             HHHHSTTSEEETTEEECCSSCSSCCCCEEEECTTSCSHHHHHHHCSSCCEEEEEEEEEEESEEECCTTCEEEEEEEEECC
T ss_pred             HHHhcceeEeeCCeEEecccccCCCCCEEEeCcccCcHHHHHHhCCCCCCcccCCEEEEecceEECCCcEEEEEEEEEcC
Confidence            99999999999999999999988889999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCeEEcCCCCeeecceeeCCCCC
Q 019770          313 SGEKLEIPDGAVLENKEINGPGDL  336 (336)
Q Consensus       313 ~~~~~~ip~g~~l~n~~~~~~~~~  336 (336)
                      +|++++||||++|||++|+||++|
T Consensus       502 ~g~~~~ip~g~~len~~v~g~~~~  525 (528)
T 3r3i_A          502 HGDRIDIPPGAVLENKIVSGNLRI  525 (528)
T ss_dssp             TTCEEECCTTCEEEEEEEC-----
T ss_pred             CCCceecCCCCEEeccEEeccccc
Confidence            999999999999999999999987
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei} Back     alignment and structure
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae} Back     alignment and structure
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A* Back     alignment and structure
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A* Back     alignment and structure
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica} Back     alignment and structure
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A* Back     alignment and structure
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A* Back     alignment and structure
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A* Back     alignment and structure
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens} Back     alignment and structure
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 336
d2icya2378 c.68.1.5 (A:6-383) UDP-glucose pyrophosphorylase 2 1e-106
d1jv1a_501 c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphor 7e-73
d2icya183 b.81.1.4 (A:384-466) UDP-glucose pyrophosphorylase 2e-42
>d2icya2 c.68.1.5 (A:6-383) UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 378 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: UDP-glucose pyrophosphorylase
domain: UDP-glucose pyrophosphorylase 2 (UDPGP 2)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  313 bits (803), Expect = e-106
 Identities = 224/250 (89%), Positives = 237/250 (94%)

Query: 1   MNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHG 60
           MNSFNTHDDT KI+EKY+ SNV+IHTFNQS+YPR+ AD+FVP P KGKTDK+GWYPPGHG
Sbjct: 129 MNSFNTHDDTHKIVEKYTNSNVDIHTFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHG 188

Query: 61  DVFPSLMNSGKLDALISQGKEYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLA 120
           DVFP+LMNSGKLD  +SQGKEYVF ANSDNLGAIVDL IL HLIQNKNEYCMEVTPKTLA
Sbjct: 189 DVFPALMNSGKLDTFLSQGKEYVFVANSDNLGAIVDLTILKHLIQNKNEYCMEVTPKTLA 248

Query: 121 DVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKRLVEADAL 180
           DVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIK+LVEADAL
Sbjct: 249 DVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKKLVEADAL 308

Query: 181 KMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLY 240
           KMEIIPNPKEVDG+KVLQLETAAGAAIRFFD+AIG NV RSRFLPVKA+SDLLLVQSDLY
Sbjct: 309 KMEIIPNPKEVDGVKVLQLETAAGAAIRFFDNAIGVNVPRSRFLPVKASSDLLLVQSDLY 368

Query: 241 TLADGFVTRN 250
           TL DGFVTRN
Sbjct: 369 TLVDGFVTRN 378
>d1jv1a_ c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphorylase {Human (Homo sapiens), AGX1 [TaxId: 9606]} Length = 501 Back     information, alignment and structure
>d2icya1 b.81.1.4 (A:384-466) UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 83 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query336
d2icya2378 UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale c 100.0
d1jv1a_501 UDP-N-acetylglucosamine pyrophosphorylase {Human ( 100.0
d2icya183 UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale c 99.96
d1fxja178 N-acetylglucosamine 1-phosphate uridyltransferase 81.14
>d2icya2 c.68.1.5 (A:6-383) UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: UDP-glucose pyrophosphorylase
domain: UDP-glucose pyrophosphorylase 2 (UDPGP 2)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=8.7e-78  Score=588.61  Aligned_cols=250  Identities=90%  Similarity=1.353  Sum_probs=244.8

Q ss_pred             CCCcCchHHHHHHHHHcCCCCceeEEEecCCceeeecCCCcccCCCCCCCCcccCCCCCccchhhhhhcChHHHHHHcCc
Q 019770            1 MNSFNTHDDTSKIIEKYSKSNVEIHTFNQSQYPRLCADDFVPLPCKGKTDKDGWYPPGHGDVFPSLMNSGKLDALISQGK   80 (336)
Q Consensus         1 MtS~~T~~~T~~~lek~~~fgl~v~~F~Q~~~P~l~~~~~~~~~~~~~~~~~~~~P~GhGdi~~aL~~sGlld~l~~~G~   80 (336)
                      |||+.||++|++||++|++||++|++|+|+++||++.+|+++++++.+.++++|+|+||||+|+||++||+|++|+++|+
T Consensus       129 MtS~~T~~~t~~~l~~~~~fg~~i~~f~Q~~~P~~~~~~~~~~~~~~~~~~~~~~P~GhGdi~~aL~~sG~Ld~l~~~Gi  208 (378)
T d2icya2         129 MNSFNTHDDTHKIVEKYTNSNVDIHTFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGK  208 (378)
T ss_dssp             EECTTTHHHHHHHHGGGTTSSSCEEEEECCCEECEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHTTTC
T ss_pred             ECCCCChHHHHHHHHHhccCCCceEEEEecccccccCCcccccccccCCCcceeecCCChhhhHHHHhcChHHHHHhcCC
Confidence            99999999999999999999999999999999999999999999887667899999999999999999999999999999


Q ss_pred             eEEEEEeCccccccccHHHHHHHHhcCCceeEEeeecccCCcceeEEEeeCCeEEEEEeecCChhhhhhhcccCCcceee
Q 019770           81 EYVFAANSDNLGAIVDLKILNHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFN  160 (336)
Q Consensus        81 ~yi~v~nvDNL~~~~Dp~~lg~~~~~~~~~~~evv~k~~~dekgG~l~~~~g~~~~vEysqlp~~~~~~~~~~~~~~~fn  160 (336)
                      ||++|+|+|||+|++||.|||||++++++++||||+|+.+++|||++|+++|+++++||+|+|+++++++++.++|++||
T Consensus       209 eyi~v~~vDNl~a~~Dp~~lG~~~~~~~~~~~kvv~Kt~~dek~G~l~~~dg~~~vvEyse~p~e~~~~~~~~~~~~~~N  288 (378)
T d2icya2         209 EYVFVANSDNLGAIVDLTILKHLIQNKNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFN  288 (378)
T ss_dssp             CEEEEEETTBTTCCCCHHHHHHHHHHTCSEEEEEEECCTTCCSSCEEEEETTEEEEECGGGSCGGGHHHHHSSSSCCEEE
T ss_pred             EEEEEEccCCcccccchHHHHHHHhcCCcceeEEEecCCCCCceeEEEEECCceeeeehhcCChhHHhhhcCCcCcceee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeEEEEHHHHHHHHHhcCcCcceeecccccCCCCceehhhhhchHHhhcccceEEEEeccceeeccCCCchhHHhhhhh
Q 019770          161 TNNLWVNLKAIKRLVEADALKMEIIPNPKEVDGIKVLQLETAAGAAIRFFDHAIGCNVHRSRFLPVKATSDLLLVQSDLY  240 (336)
Q Consensus       161 tnni~~~l~~l~~~~~~~~~~lp~~vn~K~v~~~~~~qlE~~~~d~~~~~~~~~~i~V~R~rF~PVKn~~dll~~~sd~y  240 (336)
                      ||||||+|++|+++++...++||+|+|+|++++++++|||+||||+|++|+++.+++|||+||+||||++|||++|||+|
T Consensus       289 ~nn~~~~l~~l~~~~~~~~~~l~~~~~~K~~~~~~~iqlE~~i~d~~~~~~~~~~~eV~R~rF~PvKn~sDll~~~sd~y  368 (378)
T d2icya2         289 TNNLWVNLKAIKKLVEADALKMEIIPNPKEVDGVKVLQLETAAGAAIRFFDNAIGVNVPRSRFLPVKASSDLLLVQSDLY  368 (378)
T ss_dssp             EEEEEEEHHHHHHHHHTTCCCCCCBCCEEEETTEEEECCBCCGGGGGGGSTTCEEEECCGGGCCBCCSHHHHHHHHSTTE
T ss_pred             eeeeeeeHHHHHHHHhhccCCCceEecCcCCCCCCeeehhhHHHHHHHhCCCcEEEEecccccCCCCChHHHHHHhhceE
Confidence            99999999999999988778999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCeeEec
Q 019770          241 TLADGFVTRN  250 (336)
Q Consensus       241 ~~~~g~~~~~  250 (336)
                      .+++|++++|
T Consensus       369 ~~~~~~~~~n  378 (378)
T d2icya2         369 TLVDGFVTRN  378 (378)
T ss_dssp             EEETTEEEEC
T ss_pred             EecCCEEecC
Confidence            9999999875
>d1jv1a_ c.68.1.5 (A:) UDP-N-acetylglucosamine pyrophosphorylase {Human (Homo sapiens), AGX1 [TaxId: 9606]} Back     information, alignment and structure
>d2icya1 b.81.1.4 (A:384-466) UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1fxja1 b.81.1.4 (A:252-329) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure